Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
A2M	0	genome.wustl.edu	37	12	9227282	9227282	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	9227282	9227282	G	T	SNP	A2M	ENST00000318602	human	ensembl	74_37	-1	known	silent	c.3630	p.S1210	1.000	pfam_A2M_comp,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,superfamily_Beta-lactam/transpept-like,superfamily_Cupredoxin	-	no_errors	A2M	HGNC	ENSG00000175899				106	0	0.00	59	4	6.35
ABCA13	0	genome.wustl.edu	37	7	48619925	48619925	+	Nonsense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	48619925	48619925	T	G	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	nonsense	c.14460	p.Y4820*	0.001	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	tier1	-	-	43	0	0.00	55	12	17.91
ABCA2	0	genome.wustl.edu	37	9	139906125	139906125	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	139906125	139906125	G	A	SNP	ABCA2	ENST00000265662	human	ensembl	74_37	-1	known	missense	c.5612	p.T1871I	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA2	HGNC	ENSG00000107331	tier1	-	-	116	0	0.00	65	37	36.27
ACOT7	0	genome.wustl.edu	37	1	6378592	6378592	+	Silent	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	6378592	6378592	C	A	SNP	ACOT7	ENST00000377855	human	ensembl	74_37	-1	known	silent	c.702	p.V234	1.000	NULL	pfam_Thioestr_supf	-	no_errors	ACOT7	HGNC	ENSG00000097021	tier1	-	-	106	0	0.00	60	4	6.25
ACTL9	0	genome.wustl.edu	37	19	8807932	8807932	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	8807932	8807932	G	T	SNP	ACTL9	ENST00000324436	human	ensembl	74_37	-1	known	missense	c.1120	p.P374T	0.998	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL9	HGNC	ENSG00000181786				46	0	0.00	37	4	9.76
AGPAT9	0	genome.wustl.edu	37	4	84519790	84519790	+	RNA	SNP	A	A	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	4	84519790	84519790	A	T	SNP	AGPAT9	ENST00000509044	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	AGPAT9	HGNC	ENSG00000138678	tier1	-	-	135	0	0.00	163	10	5.78
AHDC1	0	genome.wustl.edu	37	1	27874814	27874814	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	27874814	27874814	C	T	SNP	AHDC1	ENST00000247087	human	ensembl	74_37	-1	known	silent	c.3813	p.P1271	0.168	NULL	NULL	-	no_errors	AHDC1	HGNC	ENSG00000126705				33	0	0.00	35	2	5.41
ALG13	0	genome.wustl.edu	37	X	110952267	110952267	+	Silent	SNP	T	T	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	X	110952267	110952267	T	A	SNP	ALG13	ENST00000251943	human	ensembl	74_37	+1	known	silent	c.513	p.T171	0.288	pfam_OTU,pfscan_OTU	pfam_OTU,pfscan_OTU,pfscan_Tudor	-	no_errors	ALG13	HGNC	ENSG00000101901	tier1	-	-	48	0	0.00	41	5	10.87
ALPI	0	genome.wustl.edu	37	2	233323430	233323430	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	233323430	233323430	G	T	SNP	ALPI	ENST00000295463	human	ensembl	74_37	+1	known	silent	c.1272	p.V424	0.000	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase,prints_Alkaline_phosphatase	-	no_errors	ALPI	HGNC	ENSG00000163295				74	0	0.00	57	4	6.56
ANGEL1	0	genome.wustl.edu	37	14	77256975	77256975	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	14	77256975	77256975	A	G	SNP	ANGEL1	ENST00000251089	human	ensembl	74_37	-1	known	missense	c.1831	p.C611R	0.354	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	-	no_errors	ANGEL1	HGNC	ENSG00000013523				40	0	0.00	37	2	5.13
ANKRD26P1	0	genome.wustl.edu	37	16	46513115	46513115	+	RNA	SNP	T	T	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	16	46513115	46513115	T	C	SNP	ANKRD26P1	ENST00000566201	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	ANKRD26P1	HGNC	ENSG00000261239	tier1	-	-	60	0	0.00	56	5	8.20
ANKS1B	0	genome.wustl.edu	37	12	100219102	100219102	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	100219102	100219102	G	T	SNP	ANKS1B	ENST00000329257	human	ensembl	74_37	-1	known	missense	c.200	p.A67D	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_PTB/PI_dom,pfam_SAM_2,pfam_PTB,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,smart_PTB/PI_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PTB/PI_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS1B	HGNC	ENSG00000185046	tier1	-	-	65	0	0.00	61	4	6.15
ANO8	0	genome.wustl.edu	37	19	17435735	17435735	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	17435735	17435735	C	T	SNP	ANO8	ENST00000159087	human	ensembl	74_37	-1	known	missense	c.3122	p.R1041H	1.000	NULL	pfam_Anoctamin	-	no_errors	ANO8	HGNC	ENSG00000074855	tier1	-	-	90	0	0.00	65	11	14.47
AP1G1	0	genome.wustl.edu	37	16	71784219	71784219	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	16	71784219	71784219	C	T	SNP	AP1G1	ENST00000433195	human	ensembl	74_37	-1	known	missense	c.1370	p.R457H	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP1_complex_gsu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP1_complex_gsu,pfscan_Clathrin_g-adaptin_app	-	no_errors	AP1G1	HGNC	ENSG00000166747	tier1	-	-	59	0	0.00	53	4	7.02
AP3D1	0	genome.wustl.edu	37	19	2118609	2118609	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	2118609	2118609	C	T	SNP	AP3D1	ENST00000355272	human	ensembl	74_37	-1	known	silent	c.1704	p.V568	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_dsu	pfam_BLV_receptor,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_complex_dsu	-	no_errors	AP3D1	HGNC	ENSG00000065000	tier1	-	-	92	0	0.00	76	5	6.17
APOB	0	genome.wustl.edu	37	2	21242612	21242612	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	21242612	21242612	C	T	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	silent	c.2982	p.P994	0.510	pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674				98	0	0.00	92	6	6.12
ARFIP2	0	genome.wustl.edu	37	11	6500011	6500011	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	6500011	6500011	C	T	SNP	ARFIP2	ENST00000254584	human	ensembl	74_37	-1	known	missense	c.494	p.G165D	1.000	pfam_AH_dom,pfscan_AH_dom	pfam_AH_dom,pfscan_AH_dom	-	no_errors	ARFIP2	HGNC	ENSG00000132254				28	0	0.00	32	2	5.88
ASPG	0	genome.wustl.edu	37	14	104561907	104561907	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	14	104561907	104561907	G	T	SNP	ASPG	ENST00000455920	human	ensembl	74_37	+1	known	missense	c.343	p.G115C	1.000	pfam_Asparaginase/glutaminase,superfamily_Asparaginase/glutaminase,smart_Asparaginase/glutaminase,prints_Asparaginase/glutaminase,tigrfam_AsnASEI	pfam_Asparaginase/glutaminase,pfam_Ankyrin_rpt,superfamily_Asparaginase/glutaminase,superfamily_Ankyrin_rpt-contain_dom,smart_Asparaginase/glutaminase,smart_Ankyrin_rpt,prints_Asparaginase/glutaminase,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_AsnASEI	-	no_errors	ASPG	HGNC	ENSG00000166183	tier1	-	-	69	0	0.00	67	5	6.94
ATP13A5	0	genome.wustl.edu	37	3	193071969	193071969	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	193071969	193071969	G	T	SNP	ATP13A5	ENST00000342358	human	ensembl	74_37	-1	known	missense	c.553	p.P185T	1.000	pfam_ATPase_P-typ_cation-transptr_N,tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_ATPase_P-typ_cation-transptr_N,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A5	HGNC	ENSG00000187527	tier1	-	-	56	0	0.00	47	4	7.84
ATP4A	0	genome.wustl.edu	37	19	36050724	36050724	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	36050724	36050724	G	A	SNP	ATP4A	ENST00000262623	human	ensembl	74_37	-1	known	silent	c.1039	p.L347	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATPase_P-typ_H/K-transp_N,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP4A	HGNC	ENSG00000105675	tier1	-	-	33	0	0.00	26	4	13.33
ATP8B5P	0	genome.wustl.edu	37	9	35482170	35482170	+	RNA	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	35482170	35482170	G	T	SNP	ATP8B5P	ENST00000329395	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	ATP8B5P	HGNC	ENSG00000179766	tier1	-	-	33	0	0.00	33	4	10.81
BAMBI	0	genome.wustl.edu	37	10	28971125	28971125	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	10	28971125	28971125	G	A	SNP	BAMBI	ENST00000375533	human	ensembl	74_37	+1	known	missense	c.578	p.R193H	1.000	pirsf_BMP/activin_membr-bound_inhib	pfam_BMP/activin_membr-bound_inhib,pfam_Activin_rcpt,pirsf_BMP/activin_membr-bound_inhib	-	no_errors	BAMBI	HGNC	ENSG00000095739	tier1	-	-	62	0	0.00	40	5	11.11
BBS1	0	genome.wustl.edu	37	11	66299217	66299217	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	66299217	66299217	G	T	SNP	BBS1	ENST00000393994	human	ensembl	74_37	+1	putative	missense	c.1312	p.G438C	0.054	NULL	NULL	-	no_errors	BBS1	HGNC	ENSG00000174483	tier1	-	-	61	0	0.00	48	4	7.69
BCAM	0	genome.wustl.edu	37	19	45316510	45316510	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	45316510	45316510	G	A	SNP	BCAM	ENST00000270233	human	ensembl	74_37	+1	known	missense	c.508	p.A170T	0.978	pfam_CD80_C2-set,pfscan_Ig-like_dom	pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	BCAM	HGNC	ENSG00000187244	tier1	-	-	133	0	0.00	107	31	22.46
BCDIN3D	0	genome.wustl.edu	37	12	50236768	50236768	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	50236768	50236768	G	T	SNP	BCDIN3D	ENST00000333924	human	ensembl	74_37	-1	known	missense	c.103	p.P35T	1.000	NULL	pfam_Bin3	-	no_errors	BCDIN3D	HGNC	ENSG00000186666	tier1	-	-	75	0	0.00	34	4	10.53
BCL9	0	genome.wustl.edu	37	1	147095863	147095863	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	147095863	147095863	G	A	SNP	BCL9	ENST00000234739	human	ensembl	74_37	+1	known	silent	c.3384	p.P1128	0.478	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9	HGNC	ENSG00000116128	tier1	-	-	77	0	0.00	40	9	18.37
BEND7	0	genome.wustl.edu	37	10	13481306	13481306	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	10	13481306	13481306	G	T	SNP	BEND7	ENST00000396900	human	ensembl	74_37	-1	known	missense	c.1426	p.Q476K	0.005	NULL	pfam_BEN_domain	-	no_errors	BEND7	HGNC	ENSG00000165626				68	0	0.00	73	4	5.19
BIRC6	0	genome.wustl.edu	37	2	32640137	32640137	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	32640137	32640137	G	A	SNP	BIRC6	ENST00000421745	human	ensembl	74_37	+1	known	missense	c.1778	p.G593D	0.983	NULL	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760	tier1	-	-	38	0	0.00	24	6	20.00
BTN2A1	0	genome.wustl.edu	37	6	26458908	26458908	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	26458908	26458908	T	C	SNP	BTN2A1	ENST00000312541	human	ensembl	74_37	+1	known	missense	c.44	p.L15P	0.003	pfscan_Ig-like_dom	pfam_SPRY_rcpt,pfam_Ig_V-set,pfam_CD80_C2-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Ig-like_dom	-	no_errors	BTN2A1	HGNC	ENSG00000112763				83	0	0.00	81	5	5.81
BTNL3	0	genome.wustl.edu	37	5	180424394	180424394	+	Silent	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	180424394	180424394	C	A	SNP	BTNL3	ENST00000342868	human	ensembl	74_37	+1	known	silent	c.579	p.I193	0.000	pfscan_Ig-like_dom	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Ig-like_dom,prints_Butyrophylin	-	no_errors	BTNL3	HGNC	ENSG00000168903	tier1	-	-	96	0	0.00	68	8	10.39
BYSL	0	genome.wustl.edu	37	6	41899282	41899282	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	41899282	41899282	G	T	SNP	BYSL	ENST00000230340	human	ensembl	74_37	+1	known	missense	c.853	p.A285S	1.000	pfam_Bystin	pfam_Bystin	-	no_errors	BYSL	HGNC	ENSG00000112578	tier1	-	-	81	0	0.00	63	4	5.97
BZRAP1	0	genome.wustl.edu	37	17	56387907	56387907	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	56387907	56387907	C	A	SNP	BZRAP1	ENST00000355701	human	ensembl	74_37	-1	known	missense	c.3665	p.G1222V	0.965	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379	tier1	rs201358584	-	58	0	0.00	30	11	26.83
BZRAP1	0	genome.wustl.edu	37	17	56385999	56385999	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	56385999	56385999	C	T	SNP	BZRAP1	ENST00000355701	human	ensembl	74_37	-1	known	missense	c.4634	p.G1545D	0.336	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379				87	0	0.00	53	4	7.02
C12orf55	0	genome.wustl.edu	37	12	96974774	96974774	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	96974774	96974774	C	T	SNP	C12orf55	ENST00000524981	human	ensembl	74_37	+1	putative	missense	c.2966	p.A989V	1.000	superfamily_Fibronectin_type3	superfamily_Fibronectin_type3	-	no_errors	C12orf55	HGNC	ENSG00000188596	tier1	-	-	67	0	0.00	57	4	6.56
C12orf55	0	genome.wustl.edu	37	12	97038026	97038026	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	97038026	97038026	A	G	SNP	C12orf55	ENST00000524981	human	ensembl	74_37	+1	putative	missense	c.4387	p.S1463G	0.000	NULL	superfamily_Fibronectin_type3	-	no_errors	C12orf55	HGNC	ENSG00000188596	tier1	-	-	50	0	0.00	30	10	25.00
C1orf112	0	genome.wustl.edu	37	1	169796899	169796899	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	169796899	169796899	G	T	SNP	C1orf112	ENST00000286031	human	ensembl	74_37	+1	known	missense	c.1045	p.V349F	0.223	NULL	NULL	-	no_errors	C1orf112	HGNC	ENSG00000000460	tier1	-	-	67	0	0.00	47	4	7.84
C1orf173	0	genome.wustl.edu	37	1	75102068	75102068	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	75102068	75102068	G	A	SNP	C1orf173	ENST00000326665	human	ensembl	74_37	-1	known	nonsense	c.499	p.Q167*	0.995	NULL	NULL	-	no_errors	C1orf173	HGNC	ENSG00000178965	tier1	-	-	75	0	0.00	61	4	6.15
CACNA1A	0	genome.wustl.edu	37	19	13441142	13441142	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	13441142	13441142	G	T	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	silent	c.1261	p.R421	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837				51	0	0.00	47	3	6.00
CACNB2	0	genome.wustl.edu	37	10	18690939	18690939	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	10	18690939	18690939	G	T	SNP	CACNB2	ENST00000324631	human	ensembl	74_37	+1	known	missense	c.300	p.E100D	1.000	pfam_VDCC_L_bsu,superfamily_SH3_domain	pfam_GK/Ca_channel_bsu,pfam_VDCC_L_bsu,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_SH3_domain,prints_VDCC_L_bsu,prints_VDCC_L_b2su	-	no_errors	CACNB2	HGNC	ENSG00000165995				46	0	0.00	47	3	6.00
CAPN6	0	genome.wustl.edu	37	X	110494492	110494492	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	X	110494492	110494492	T	G	SNP	CAPN6	ENST00000324068	human	ensembl	74_37	-1	known	missense	c.916	p.T306P	1.000	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,pfam_C2_dom,superfamily_Calpain_domain_III,superfamily_C2_dom,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_C2_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN6	HGNC	ENSG00000077274	tier1	-	-	42	0	0.00	28	6	17.65
CASP8AP2	0	genome.wustl.edu	37	6	90578430	90578430	+	RNA	DEL	A	A	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	90578430	90578430	A	-	DEL	CASP8AP2	ENST00000237177	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	CASP8AP2	HGNC	ENSG00000118412	tier1			27	0	0.00	29	2	6.45
CASS4	0	genome.wustl.edu	37	20	55012570	55012570	+	Silent	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	20	55012570	55012570	A	G	SNP	CASS4	ENST00000360314	human	ensembl	74_37	+1	known	silent	c.387	p.Q129	0.584	NULL	pfam_Serine_rich,pfam_CAS_DUF3513,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	CASS4	HGNC	ENSG00000087589	tier1	-	-	41	0	0.00	33	5	13.16
CBLB	0	genome.wustl.edu	37	3	105421029	105421029	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	105421029	105421029	G	T	SNP	CBLB	ENST00000264122	human	ensembl	74_37	-1	known	nonsense	c.1868	p.S623*	0.367	NULL	pfam_Adaptor_Cbl_N_hlx,pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Znf_C3HC4_RING-type,pfam_UBA/Ts_N,superfamily_Adaptor_Cbl_N_hlx,superfamily_UBA-like,smart_Znf_RING,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RING	-	no_errors	CBLB	HGNC	ENSG00000114423				41	0	0.00	35	2	5.26
CCBL2	0	genome.wustl.edu	37	1	89453970	89453970	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	89453970	89453970	A	G	SNP	CCBL2	ENST00000260508	human	ensembl	74_37	-1	known	missense	c.64	p.S22P	0.029	NULL	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	-	no_errors	CCBL2	HGNC	ENSG00000137944	tier1	-	-	78	0	0.00	43	23	34.85
CCDC103	0	genome.wustl.edu	37	17	42979018	42979018	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	42979018	42979018	C	A	SNP	CCDC103	ENST00000410006	human	ensembl	74_37	+1	known	missense	c.274	p.P92T	0.652	NULL	NULL	-	no_errors	CCDC103	HGNC	ENSG00000167131				69	0	0.00	55	4	6.78
CCDC144NL	0	genome.wustl.edu	37	17	20799142	20799142	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	20799142	20799142	G	A	SNP	CCDC144NL	ENST00000327925	human	ensembl	74_37	-1	known	silent	c.192	p.H64	0.000	NULL	NULL	-	no_errors	CCDC144NL	HGNC	ENSG00000205212	tier1	-	-	86	0	0.00	41	18	30.51
CCDC82	0	genome.wustl.edu	37	11	96117597	96117597	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	96117597	96117597	G	T	SNP	CCDC82	ENST00000278520	human	ensembl	74_37	-1	known	missense	c.315	p.N105K	0.000	NULL	NULL	-	no_errors	CCDC82	HGNC	ENSG00000149231	tier1	-	-	75	0	0.00	77	5	6.10
CD1A	0	genome.wustl.edu	37	1	158224912	158224912	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	158224912	158224912	G	T	SNP	CD1A	ENST00000289429	human	ensembl	74_37	+1	known	missense	c.97	p.A33S	0.000	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1A	HGNC	ENSG00000158477				40	0	0.00	37	2	5.13
CD1E	0	genome.wustl.edu	37	1	158324338	158324338	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	158324338	158324338	T	G	SNP	CD1E	ENST00000368167	human	ensembl	74_37	+1	known	missense	c.230	p.L77R	0.002	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1E	HGNC	ENSG00000158488	tier1	-	-	56	0	0.00	32	10	23.81
CDC6	0	genome.wustl.edu	37	17	38449839	38449839	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	38449839	38449839	G	T	SNP	CDC6	ENST00000209728	human	ensembl	74_37	+1	known	missense	c.792	p.M264I	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pirsf_Cell_div_Cdc6/18	pfam_ATPase_AAA_core,pfam_Cdc6_C_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pirsf_Cell_div_Cdc6/18	-	no_errors	CDC6	HGNC	ENSG00000094804	tier1	-	-	76	0	0.00	42	4	8.70
CDKN2A	0	genome.wustl.edu	37	9	21971025	21971026	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	21971025	21971026	GC	-	DEL	CDKN2A	ENST00000361570	human	ensembl	74_37	-1	known	frame_shift_del	c.499_498	p.P167fs	0.998:1.000	NULL	pfam_Cyclin_kinase-Inhib_2A	-	no_errors	CDKN2A	HGNC	ENSG00000147889	tier1			62	0	0.00	18	16	47.06
CHD1	0	genome.wustl.edu	37	5	98223808	98223808	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	98223808	98223808	C	T	SNP	CHD1	ENST00000284049	human	ensembl	74_37	-1	known	missense	c.2480	p.R827H	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD1	HGNC	ENSG00000153922				68	0	0.00	66	4	5.71
CHD6	0	genome.wustl.edu	37	20	40045933	40045933	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	20	40045933	40045933	C	T	SNP	CHD6	ENST00000373233	human	ensembl	74_37	-1	known	missense	c.6184	p.G2062R	0.997	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_BRK_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD6	HGNC	ENSG00000124177				44	0	0.00	75	4	5.06
CHL1	0	genome.wustl.edu	37	3	382518	382518	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	382518	382518	G	T	SNP	CHL1	ENST00000256509	human	ensembl	74_37	+1	known	missense	c.427	p.V143L	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CHL1	HGNC	ENSG00000134121				44	0	0.00	57	3	5.00
CLCN7	0	genome.wustl.edu	37	16	1498746	1498746	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	16	1498746	1498746	G	T	SNP	CLCN7	ENST00000382745	human	ensembl	74_37	-1	known	missense	c.1819	p.Q607K	1.000	superfamily_Cl-channel_core,prints_Cl-channel_volt-gated	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-7	-	no_errors	CLCN7	HGNC	ENSG00000103249	tier1	-	-	121	0	0.00	74	4	5.13
CLDN16	0	genome.wustl.edu	37	3	190122688	190122688	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	190122688	190122688	G	A	SNP	CLDN16	ENST00000264734	human	ensembl	74_37	+1	known	missense	c.565	p.V189I	1.000	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin16,prints_Claudin	-	no_errors	CLDN16	HGNC	ENSG00000113946	tier1	-	-	60	0	0.00	54	4	6.90
COG4	0	genome.wustl.edu	37	16	70551549	70551549	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	16	70551549	70551549	G	A	SNP	COG4	ENST00000323786	human	ensembl	74_37	-1	known	missense	c.349	p.R117C	1.000	NULL	pfam_COG_su4,smart_COG_su4	-	no_errors	COG4	HGNC	ENSG00000103051	tier1	rs149620212	-	31	0	0.00	22	7	24.14
COL12A1	0	genome.wustl.edu	37	6	75866113	75866113	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	75866113	75866113	T	G	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	missense	c.3110	p.K1037T	0.873	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1	-	-	81	0	0.00	55	4	6.78
COL21A1	0	genome.wustl.edu	37	6	55990409	55990409	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	55990409	55990409	C	A	SNP	COL21A1	ENST00000244728	human	ensembl	74_37	-1	known	missense	c.1606	p.G536C	1.000	pfam_Collagen	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL21A1	HGNC	ENSG00000124749	tier1	-	-	76	0	0.00	75	9	10.71
CORO2A	0	genome.wustl.edu	37	9	100887124	100887124	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	100887124	100887124	G	A	SNP	CORO2A	ENST00000343933	human	ensembl	74_37	-1	known	nonsense	c.1510	p.R504*	1.000	NULL	pfam_DUF1900,pfam_DUF1899,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO2A	HGNC	ENSG00000106789	tier1	-	-	49	0	0.00	39	4	9.30
CPT1A	0	genome.wustl.edu	37	11	68540864	68540864	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	68540864	68540864	C	T	SNP	CPT1A	ENST00000265641	human	ensembl	74_37	-1	known	missense	c.1609	p.A537T	0.996	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT1A	HGNC	ENSG00000110090	tier1	-	-	61	0	0.00	67	4	5.63
CRB1	0	genome.wustl.edu	37	1	197396706	197396706	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	197396706	197396706	T	G	SNP	CRB1	ENST00000367400	human	ensembl	74_37	+1	known	missense	c.2251	p.L751V	0.999	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_EG-like_dom,pfam_Laminin_G,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	CRB1	HGNC	ENSG00000134376	tier1	-	-	48	0	0.00	38	7	15.56
CREB3L2	0	genome.wustl.edu	37	7	137565290	137565290	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	137565290	137565290	C	T	SNP	CREB3L2	ENST00000330387	human	ensembl	74_37	-1	known	missense	c.1495	p.A499T	0.774	NULL	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	CREB3L2	HGNC	ENSG00000182158	tier1	-	-	57	0	0.00	44	4	8.33
CROT	0	genome.wustl.edu	37	7	86990707	86990707	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	86990707	86990707	T	C	SNP	CROT	ENST00000331536	human	ensembl	74_37	+1	known	missense	c.242	p.L81P	1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CROT	HGNC	ENSG00000005469	tier1	-	-	63	0	0.00	51	4	7.27
CSAD	0	genome.wustl.edu	37	12	53553458	53553458	+	Frame_Shift_Del	DEL	G	G	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	53553458	53553458	G	-	DEL	CSAD	ENST00000267085	human	ensembl	74_37	-1	known	frame_shift_del	c.1338	p.S447fs	1.000	superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,pfam_Aminotrans_V/Cys_dSase,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	CSAD	HGNC	ENSG00000139631	tier1			53	0	0.00	49	3	5.77
CSMD1	0	genome.wustl.edu	37	8	2986325	2986326	+	RNA	INS	-	-	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	8	2986325	2986326	-	T	INS	CSMD1	ENST00000523387	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1			30	0	0.00	25	4	13.79
CYBB	0	genome.wustl.edu	37	X	37655265	37655265	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	X	37655265	37655265	T	C	SNP	CYBB	ENST00000378588	human	ensembl	74_37	+1	known	missense	c.545	p.I182T	1.000	pfam_Fe3_Rdtase_TM_dom,prints_Cyt_b245_heavy_chain	pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	CYBB	HGNC	ENSG00000165168	tier1	-	-	29	0	0.00	21	4	16.00
CYBB	0	genome.wustl.edu	37	X	37655341	37655341	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	X	37655341	37655341	C	T	SNP	CYBB	ENST00000378588	human	ensembl	74_37	+1	known	silent	c.621	p.Y207	1.000	pfam_Fe3_Rdtase_TM_dom,prints_Cyt_b245_heavy_chain	pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	CYBB	HGNC	ENSG00000165168	tier1	-	-	50	0	0.00	37	4	9.76
CYP4F12	0	genome.wustl.edu	37	19	15789138	15789138	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	15789138	15789138	C	T	SNP	CYP4F12	ENST00000324632	human	ensembl	74_37	+1	known	missense	c.266	p.T89M	0.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F12	HGNC	ENSG00000186204				86	0	0.00	69	4	5.48
DAB2IP	0	genome.wustl.edu	37	9	124535156	124535156	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	124535156	124535156	C	T	SNP	DAB2IP	ENST00000408936	human	ensembl	74_37	+1	known	silent	c.2349	p.A783	0.063	pfam_DUF3498	pfam_DUF3498,pfam_RasGAP,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	DAB2IP	HGNC	ENSG00000136848	tier1	-	-	28	0	0.00	10	8	44.44
DAO	0	genome.wustl.edu	37	12	109293195	109293195	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	109293195	109293195	C	T	SNP	DAO	ENST00000228476	human	ensembl	74_37	+1	known	missense	c.856	p.R286C	0.982	pfam_FAD-dep_OxRdtase	pfam_FAD-dep_OxRdtase	-	no_errors	DAO	HGNC	ENSG00000110887				67	0	0.00	57	3	5.00
DBF4B	0	genome.wustl.edu	37	17	42828478	42828478	+	Silent	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	42828478	42828478	C	A	SNP	DBF4B	ENST00000315005	human	ensembl	74_37	+1	known	silent	c.1705	p.R569	0.000	NULL	pfam_Znf_DBF,superfamily_BRCT_dom,smart_Znf_DBF	-	no_errors	DBF4B	HGNC	ENSG00000161692				69	0	0.00	55	3	5.17
DCAF4	0	genome.wustl.edu	37	14	73423169	73423169	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	14	73423169	73423169	C	T	SNP	DCAF4	ENST00000358377	human	ensembl	74_37	+1	known	missense	c.1255	p.P419S	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4	HGNC	ENSG00000119599	tier1	-	-	67	0	0.00	37	4	9.76
DCHS1	0	genome.wustl.edu	37	11	6647467	6647467	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	6647467	6647467	C	T	SNP	DCHS1	ENST00000299441	human	ensembl	74_37	-1	known	missense	c.6509	p.R2170H	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS1	HGNC	ENSG00000166341	tier1	rs147106756	-	23	0	0.00	13	4	23.53
DCHS2	0	genome.wustl.edu	37	4	155158150	155158150	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	4	155158150	155158150	T	G	SNP	DCHS2	ENST00000357232	human	ensembl	74_37	-1	known	missense	c.6289	p.K2097Q	0.001	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410	tier1	-	-	78	0	0.00	48	10	17.24
DEPDC5	0	genome.wustl.edu	37	22	32206513	32206513	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	22	32206513	32206513	G	T	SNP	DEPDC5	ENST00000266091	human	ensembl	74_37	+1	known	missense	c.1331	p.G444V	0.947	NULL	pfam_IML1,pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	-	no_errors	DEPDC5	HGNC	ENSG00000100150	tier1	-	-	78	0	0.00	73	4	5.19
DHCR7	0	genome.wustl.edu	37	11	71155041	71155041	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	71155041	71155041	G	T	SNP	DHCR7	ENST00000355527	human	ensembl	74_37	-1	known	missense	c.319	p.Q107K	1.000	pfam_Ergosterol_biosynth_ERG4_ERG24	pfam_Ergosterol_biosynth_ERG4_ERG24	-	no_errors	DHCR7	HGNC	ENSG00000172893	tier1	-	-	74	0	0.00	54	4	6.90
DHX32	0	genome.wustl.edu	37	10	127569206	127569206	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	10	127569206	127569206	G	T	SNP	DHX32	ENST00000284690	human	ensembl	74_37	-1	known	missense	c.188	p.P63H	1.000	superfamily_P-loop_NTPase	pfam_Helicase-assoc_dom,pfam_DUF1605,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd	-	no_errors	DHX32	HGNC	ENSG00000089876	tier1	-	-	56	0	0.00	38	4	9.52
DMD	0	genome.wustl.edu	37	X	31224764	31224764	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	X	31224764	31224764	C	T	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.9584	p.R3195H	1.000	pfam_EF-hand_dom_typ1,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	20	0	0.00	18	5	21.74
DNAH5	0	genome.wustl.edu	37	5	13717530	13717530	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	13717530	13717530	T	G	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.12599	p.K4200T	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	38	0	0.00	31	9	22.50
DNAH5	0	genome.wustl.edu	37	5	13717543	13717543	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	13717543	13717543	G	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.12586	p.Q4196K	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139				44	0	0.00	33	2	5.71
DNAH7	0	genome.wustl.edu	37	2	196729724	196729724	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	196729724	196729724	G	A	SNP	DNAH7	ENST00000312428	human	ensembl	74_37	-1	known	missense	c.6655	p.R2219C	1.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP9/14,smart_AAA+_ATPase,pfscan_EF_hand_dom	-	no_errors	DNAH7	HGNC	ENSG00000118997	tier1	-	-	39	0	0.00	20	5	20.00
DPP8	0	genome.wustl.edu	37	15	65756200	65756200	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	15	65756200	65756200	T	C	SNP	DPP8	ENST00000341861	human	ensembl	74_37	-1	known	missense	c.1918	p.S640G	1.000	NULL	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_X-Pro-like_dom	-	no_errors	DPP8	HGNC	ENSG00000074603	tier1	-	-	35	0	0.00	37	4	9.76
DST	0	genome.wustl.edu	37	6	56484508	56484508	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	56484508	56484508	C	A	SNP	DST	ENST00000370765	human	ensembl	74_37	-1	known	missense	c.4324	p.G1442C	0.000	NULL	pfam_Plectin_repeat,pfam_Spectrin_repeat,superfamily_Ig/albumin-bd,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	64	0	0.00	49	4	7.55
EDA2R	0	genome.wustl.edu	37	X	65822517	65822517	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	X	65822517	65822517	A	C	SNP	EDA2R	ENST00000253392	human	ensembl	74_37	-1	known	missense	c.475	p.F159V	0.975	NULL	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_27	-	no_errors	EDA2R	HGNC	ENSG00000131080	tier1	-	-	17	0	0.00	10	6	37.50
EIF4A2	0	genome.wustl.edu	37	3	186504993	186504993	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	186504993	186504993	G	T	SNP	EIF4A2	ENST00000440191	human	ensembl	74_37	+1	known	missense	c.852	p.R284S	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	EIF4A2	HGNC	ENSG00000156976				65	0	0.00	41	4	8.89
ELMO1	0	genome.wustl.edu	37	7	37251021	37251021	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	37251021	37251021	G	T	SNP	ELMO1	ENST00000310758	human	ensembl	74_37	-1	known	nonsense	c.1056	p.Y352*	1.000	pfam_Engulfment_cell_motility_ELMO	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO1	HGNC	ENSG00000155849				82	0	0.00	75	4	5.06
ENSG00000232274	0	genome.wustl.edu	37	1	143207727	143207727	+	RNA	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	143207727	143207727	T	G	SNP	ENSG00000232274	ENST00000412204	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.315	-	-	-	no_errors	RP11-782C8.2	Clone_based_vega_gene	ENSG00000232274	tier1	-	-	120	0	0.00	119	13	9.85
ENSG00000234677	0	genome.wustl.edu	37	10	125673543	125673543	+	Splice_Site	SNP	A	A	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	10	125673543	125673543	A	C	SNP	ENSG00000234677	ENST00000435782	human	ensembl	74_37	-1	known	splice_site	c.NULL	NULL	0.004	-	-	-	no_errors	RP11-285A18.2	Clone_based_vega_gene	ENSG00000234677	tier1	-	-	68	0	0.00	38	15	28.30
ENSG00000267420	0	genome.wustl.edu	37	17	42009954	42009954	+	RNA	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	42009954	42009954	A	G	SNP	ENSG00000267420	ENST00000592842	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-527L4.6	Clone_based_vega_gene	ENSG00000267420	tier1	-	-	23	0	0.00	15	6	28.57
ENSG00000271554	0	genome.wustl.edu	37	1	36475027	36475027	+	RNA	DEL	A	A	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	36475027	36475027	A	-	DEL	ENSG00000271554	ENST00000479395	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	RP4-665N4.8	Clone_based_vega_gene	ENSG00000271554	tier1			18	0	0.00	15	3	16.67
EPB41L4A	0	genome.wustl.edu	37	5	111504484	111504484	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	111504484	111504484	C	T	SNP	EPB41L4A	ENST00000261486	human	ensembl	74_37	-1	known	silent	c.1884	p.V628	1.000	NULL	pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L4A	HGNC	ENSG00000129595	tier1	-	-	66	0	0.00	47	4	7.84
EPHB6	0	genome.wustl.edu	37	7	142568320	142568320	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	142568320	142568320	T	A	SNP	EPHB6	ENST00000392957	human	ensembl	74_37	+1	known	missense	c.2839	p.F947I	1.000	pirsf_Tyr_kinase_ephrin_rcpt,superfamily_SAM/pointed,smart_SAM	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB6	HGNC	ENSG00000106123	tier1	-	-	53	0	0.00	41	8	16.33
ETFDH	0	genome.wustl.edu	37	4	159629656	159629656	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	4	159629656	159629656	G	T	SNP	ETFDH	ENST00000511912	human	ensembl	74_37	+1	known	nonsense	c.1831	p.G611*	1.000	NULL	pfam_ETFD_OxRdtase,pfam_FAD_bind_dom,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,prints_Pyridine_nuc-diS_OxRdtase_2	-	no_errors	ETFDH	HGNC	ENSG00000171503	tier1	-	-	75	0	0.00	57	4	6.56
F13B	0	genome.wustl.edu	37	1	197021845	197021845	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	197021845	197021845	A	C	SNP	F13B	ENST00000367412	human	ensembl	74_37	-1	known	missense	c.1474	p.L492V	0.006	superfamily_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	F13B	HGNC	ENSG00000143278	tier1	-	-	39	0	0.00	66	9	12.00
F8	0	genome.wustl.edu	37	X	154158656	154158656	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	X	154158656	154158656	G	T	SNP	F8	ENST00000360256	human	ensembl	74_37	-1	known	missense	c.3409	p.L1137M	0.000	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010				15	0	0.00	19	4	17.39
FAM171A2	0	genome.wustl.edu	37	17	42432356	42432356	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	42432356	42432356	G	A	SNP	FAM171A2	ENST00000293443	human	ensembl	74_37	-1	known	missense	c.1226	p.A409V	0.065	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171,superfamily_Collagen-bd_Cna_B-typ_dom	-	no_errors	FAM171A2	HGNC	ENSG00000161682	tier1	-	-	111	0	0.00	70	7	9.09
FAM186B	0	genome.wustl.edu	37	12	49999107	49999107	+	Frame_Shift_Del	DEL	C	C	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	49999107	49999107	C	-	DEL	FAM186B	ENST00000533372	human	ensembl	74_37	-1	known	frame_shift_del	c.154	p.A52fs	0.077	NULL	NULL	-	no_errors	FAM186B	HGNC	ENSG00000135436	tier1			42	0	0.00	22	2	8.33
FAM19A5	0	genome.wustl.edu	37	22	49145967	49145969	+	RNA	DEL	GAG	GAG	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	22	49145967	49145969	GAG	-	DEL	FAM19A5	ENST00000473898	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.000:0.000	-	-	-	no_errors	FAM19A5	HGNC	ENSG00000219438	tier1			41	0	0.00	28	2	6.67
FAM218A	0	genome.wustl.edu	37	4	165878495	165878495	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	4	165878495	165878495	G	A	SNP	FAM218A	ENST00000513876	human	ensembl	74_37	+1	known	silent	c.321	p.T107	0.000	NULL	NULL	-	no_errors	FAM218A	HGNC	ENSG00000250486	tier1	-	-	56	0	0.00	29	4	12.12
FANCD2	0	genome.wustl.edu	37	3	10108913	10108913	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	10108913	10108913	G	T	SNP	FANCD2	ENST00000287647	human	ensembl	74_37	+1	known	missense	c.2406	p.Q802H	0.852	NULL	superfamily_ARM-type_fold	-	no_errors	FANCD2	HGNC	ENSG00000144554	tier1	rs80258959	-	32	0	0.00	24	3	11.11
FBN2	0	genome.wustl.edu	37	5	127610319	127610319	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	127610319	127610319	G	T	SNP	FBN2	ENST00000262464	human	ensembl	74_37	-1	known	missense	c.7651	p.L2551M	1.000	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829	tier1	-	-	71	0	0.00	48	4	7.69
FDXACB1	0	genome.wustl.edu	37	11	111749781	111749781	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	111749781	111749781	G	A	SNP	FDXACB1	ENST00000260257	human	ensembl	74_37	-1	known	nonsense	c.76	p.Q26*	0.000	pfam_DUF2431	pfam_DUF2431,pfam_PheS_beta_Fdx_antiC-bd,superfamily_PheS_beta_Fdx_antiC-bd,smart_PheS_beta_Fdx_antiC-bd	-	no_errors	FDXACB1	HGNC	ENSG00000255561	tier1	-	-	179	0	0.00	91	28	23.53
FGA	0	genome.wustl.edu	37	4	155507462	155507462	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	4	155507462	155507462	C	T	SNP	FGA	ENST00000302053	human	ensembl	74_37	-1	known	nonsense	c.1119	p.W373*	0.013	NULL	pfam_Fibrinogen_a/b/g_C_dom,pfam_Fibrinogen_a/b/g_coil_dom,pfam_Fibrinogen_aC,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	FGA	HGNC	ENSG00000171560	tier1	-	-	68	0	0.00	53	8	13.11
FGD5	0	genome.wustl.edu	37	3	14965554	14965554	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	14965554	14965554	G	T	SNP	FGD5	ENST00000285046	human	ensembl	74_37	+1	known	missense	c.3977	p.R1326L	1.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD5	HGNC	ENSG00000154783				50	0	0.00	33	4	10.81
FLJ46361	0	genome.wustl.edu	37	10	124516522	124516522	+	RNA	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	10	124516522	124516522	C	T	SNP	FLJ46361	ENST00000439464	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.983	-	-	-	no_errors	RP11-318C4.2	Clone_based_vega_gene	ENSG00000176584				39	0	0.00	41	4	8.89
FLRT2	0	genome.wustl.edu	37	14	86089572	86089572	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	14	86089572	86089572	T	C	SNP	FLRT2	ENST00000330753	human	ensembl	74_37	+1	known	missense	c.1714	p.Y572H	1.000	NULL	pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT2	HGNC	ENSG00000185070	tier1	-	-	21	0	0.00	19	9	32.14
FMN2	0	genome.wustl.edu	37	1	240256817	240256817	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	240256817	240256817	C	T	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	missense	c.1408	p.R470W	0.742	NULL	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				30	0	0.00	36	3	7.69
FSHR	0	genome.wustl.edu	37	2	49190059	49190059	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	49190059	49190059	C	T	SNP	FSHR	ENST00000406846	human	ensembl	74_37	-1	known	missense	c.1901	p.R634H	1.000	prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_GnHR_TM,pfam_LRR-contain_N,pfam_Leu-rich_rpt,smart_LRR-contain_N,pfscan_GPCR_Rhodpsn_7TM,prints_FSH_rcpt,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,prints_TSH_rcpt	-	no_errors	FSHR	HGNC	ENSG00000170820	tier1	-	-	61	0	0.00	21	7	25.00
GAMT	0	genome.wustl.edu	37	19	1399827	1399827	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	1399827	1399827	G	A	SNP	GAMT	ENST00000447102	human	ensembl	74_37	-1	known	missense	c.292	p.R98W	1.000	NULL	NULL	-	no_errors	GAMT	HGNC	ENSG00000130005	tier1	-	-	50	0	0.00	29	4	12.12
GCLC	0	genome.wustl.edu	37	6	53363689	53363689	+	Silent	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	53363689	53363689	T	G	SNP	GCLC	ENST00000229416	human	ensembl	74_37	-1	known	silent	c.1779	p.I593	0.847	pfam_GCS	pfam_GCS	-	no_errors	GCLC	HGNC	ENSG00000001084				36	0	0.00	40	3	6.98
GCNT4	0	genome.wustl.edu	37	5	74325823	74325823	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	74325823	74325823	G	T	SNP	GCNT4	ENST00000322348	human	ensembl	74_37	-1	known	missense	c.40	p.Q14K	0.997	NULL	pfam_Glyco_trans_14	-	no_errors	GCNT4	HGNC	ENSG00000176928				38	0	0.00	35	4	10.26
GDI1	0	genome.wustl.edu	37	X	153668793	153668793	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	X	153668793	153668793	G	A	SNP	GDI1	ENST00000447750	human	ensembl	74_37	+1	known	missense	c.659	p.G220D	1.000	pfam_GDP_dissociation_inhibitor,prints_GDP_dissociation_inhibitor	pfam_GDP_dissociation_inhibitor,prints_RabGDI,prints_GDP_dissociation_inhibitor	-	no_errors	GDI1	HGNC	ENSG00000203879	tier1	-	-	32	0	0.00	30	4	11.76
GOLGA8A	0	genome.wustl.edu	37	15	34673778	34673778	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	15	34673778	34673778	G	C	SNP	GOLGA8A	ENST00000432566	human	ensembl	74_37	-1	known	missense	c.1736	p.P579R	0.020	NULL	NULL	-	no_errors	GOLGA8A	HGNC	ENSG00000175265	tier1	-	-	173	0	0.00	86	32	27.12
GPR116	0	genome.wustl.edu	37	6	46826150	46826150	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	46826150	46826150	G	T	SNP	GPR116	ENST00000265417	human	ensembl	74_37	-1	known	missense	c.3490	p.L1164I	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_Ig-hepta_rcpt	pfam_GPCR_2_secretin-like,pfam_SEA_dom,pfam_GPS_dom,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom,prints_GPCR_2_Ig-hepta_rcpt,prints_GPCR_2_secretin-like	-	no_errors	GPR116	HGNC	ENSG00000069122				57	0	0.00	57	3	5.00
GPR98	0	genome.wustl.edu	37	5	89971204	89971204	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	89971204	89971204	G	T	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.5255	p.R1752M	0.258	pfam_Calx_beta,smart_Calx_beta	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	tier1	-	-	75	0	0.00	58	4	6.45
GRAP2	0	genome.wustl.edu	37	22	40356069	40356069	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	22	40356069	40356069	G	T	SNP	GRAP2	ENST00000344138	human	ensembl	74_37	+1	known	nonsense	c.181	p.E61*	1.000	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_SH3_domain,pfam_SH2,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain	-	no_errors	GRAP2	HGNC	ENSG00000100351				111	0	0.00	65	4	5.80
GSK3B	0	genome.wustl.edu	37	3	119624622	119624622	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	119624622	119624622	G	A	SNP	GSK3B	ENST00000316626	human	ensembl	74_37	-1	known	nonsense	c.793	p.Q265*	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	GSK3B	HGNC	ENSG00000082701	tier1	-	-	53	0	0.00	50	4	7.41
GSN	0	genome.wustl.edu	37	9	124064311	124064311	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	124064311	124064311	G	T	SNP	GSN	ENST00000373818	human	ensembl	74_37	+1	known	missense	c.215	p.R72L	1.000	smart_Villin/Gelsolin	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	GSN	HGNC	ENSG00000148180	tier1	-	-	61	0	0.00	38	4	9.52
GSTK1	0	genome.wustl.edu	37	7	142965910	142965910	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	142965910	142965910	G	A	SNP	GSTK1	ENST00000479303	human	ensembl	74_37	+1	known	missense	c.829	p.A277T	0.008	superfamily_Thioredoxin-like_fold	pfam_DSBA-like_thioredoxin_dom,superfamily_Thioredoxin-like_fold	-	no_errors	GSTK1	HGNC	ENSG00000197448	tier1	-	-	56	0	0.00	43	15	25.86
GTPBP3	0	genome.wustl.edu	37	19	17445818	17445818	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	17445818	17445818	G	A	SNP	GTPBP3	ENST00000361619	human	ensembl	74_37	+1	known	silent	c.6	p.V2	0.002	NULL	pfam_GTP-bd_TrmE_N,pfam_GTP_binding_domain,superfamily_P-loop_NTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	GTPBP3	HGNC	ENSG00000130299	tier1	-	-	46	0	0.00	40	4	8.89
GUCY2C	0	genome.wustl.edu	37	12	14766072	14766072	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	14766072	14766072	G	T	SNP	GUCY2C	ENST00000261170	human	ensembl	74_37	-1	known	missense	c.3201	p.D1067E	0.004	NULL	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_A/G_cyclase,superfamily_Peripla_BP_I,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2C	HGNC	ENSG00000070019				121	0	0.00	73	5	6.41
HBP1	0	genome.wustl.edu	37	7	106823018	106823018	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	106823018	106823018	C	T	SNP	HBP1	ENST00000222574	human	ensembl	74_37	+1	known	missense	c.370	p.P124S	1.000	NULL	pfam_Ataxin-1_HBP1,pfam_HMG_box_dom,superfamily_Ataxin-1_HBP1,superfamily_HMG_box_dom,smart_Ataxin_AXH_dom,smart_HMG_box_dom,pfscan_Ataxin-1_HBP1,pfscan_HMG_box_dom	-	no_errors	HBP1	HGNC	ENSG00000105856	tier1	-	-	56	0	0.00	40	5	11.11
HDLBP	0	genome.wustl.edu	37	2	242207918	242207918	+	RNA	SNP	T	T	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	242207918	242207918	T	C	SNP	HDLBP	ENST00000462130	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HDLBP	HGNC	ENSG00000115677	tier1	-	-	71	0	0.00	45	6	11.76
HHIPL2	0	genome.wustl.edu	37	1	222712025	222712025	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	222712025	222712025	G	A	SNP	HHIPL2	ENST00000343410	human	ensembl	74_37	-1	known	silent	c.1542	p.L514	0.936	pfam_Glc/Sorbosone_DH,superfamily_Quinoprot_gluc/sorb_DH	pfam_Folate_rcpt-like,pfam_Glc/Sorbosone_DH,superfamily_Quinoprot_gluc/sorb_DH,superfamily_Saposin-like	-	no_errors	HHIPL2	HGNC	ENSG00000143512	tier1	-	-	37	0	0.00	60	5	7.69
HLA-DPB1	0	genome.wustl.edu	37	6	33043881	33043881	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	33043881	33043881	G	T	SNP	HLA-DPB1	ENST00000418931	human	ensembl	74_37	+1	known	silent	c.63	p.V21	0.054	superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_II_b_N,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	HLA-DPB1	HGNC	ENSG00000223865	tier1	-	-	85	0	0.00	54	4	6.90
HLX	0	genome.wustl.edu	37	1	221055546	221055546	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	221055546	221055546	G	A	SNP	HLX	ENST00000366903	human	ensembl	74_37	+1	known	silent	c.813	p.T271	0.001	superfamily_Homeodomain-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	HLX	HGNC	ENSG00000136630				45	0	0.00	40	4	9.09
HUWE1	0	genome.wustl.edu	37	X	53630391	53630391	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	X	53630391	53630391	G	T	SNP	HUWE1	ENST00000262854	human	ensembl	74_37	-1	known	missense	c.2814	p.S938R	1.000	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/Ts_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758	tier1	-	-	34	0	0.00	35	4	10.26
IER3	0	genome.wustl.edu	37	6	30712267	30712267	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	30712267	30712267	G	C	SNP	IER3	ENST00000259874	human	ensembl	74_37	-1	known	missense	c.29	p.T10S	0.314	NULL	NULL	-	no_errors	IER3	HGNC	ENSG00000137331				13	0	0.00	7	3	30.00
IFT80	0	genome.wustl.edu	37	3	160156367	160156368	+	Frame_Shift_Ins	INS	-	-	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	160156367	160156368	-	T	INS	IFT80	ENST00000483754	human	ensembl	74_37	-1	known	frame_shift_ins	c.605_604	p.S202fs	0.000:0.000	NULL	pfam_WD40_repeat,pfam_Znf_C3HC4_RING-type,pfam_Znf_B-box,superfamily_WD40_repeat_dom,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_B-box,pfscan_Znf_RING,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	RP11-432B6.3	Clone_based_vega_gene	ENSG00000248710	tier1			33	0	0.00	27	7	20.59
IGFN1	0	genome.wustl.edu	37	1	201182749	201182749	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	201182749	201182749	G	T	SNP	IGFN1	ENST00000335211	human	ensembl	74_37	+1	known	missense	c.8728	p.G2910C	0.927	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGFN1	HGNC	ENSG00000163395	tier1	-	-	39	0	0.00	45	4	8.16
IGSF9B	0	genome.wustl.edu	37	11	133801606	133801606	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	133801606	133801606	G	A	SNP	IGSF9B	ENST00000321016	human	ensembl	74_37	-1	known	missense	c.1195	p.P399S	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF9B	HGNC	ENSG00000080854	tier1	-	-	40	0	0.00	22	4	15.38
IRX4	0	genome.wustl.edu	37	5	1878122	1878122	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	1878122	1878122	G	A	SNP	IRX4	ENST00000231357	human	ensembl	74_37	-1	known	silent	c.1521	p.L507	0.021	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX4	HGNC	ENSG00000113430	tier1	-	-	18	0	0.00	13	4	23.53
ITGA7	0	genome.wustl.edu	37	12	56091595	56091595	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	56091595	56091595	G	A	SNP	ITGA7	ENST00000555728	human	ensembl	74_37	-1	known	silent	c.1425	p.G475	0.453	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA7	HGNC	ENSG00000135424	tier1	-	-	34	0	0.00	27	7	20.59
IVL	0	genome.wustl.edu	37	1	152883269	152883269	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	152883269	152883269	A	C	SNP	IVL	ENST00000368764	human	ensembl	74_37	+1	known	missense	c.996	p.Q332H	0.767	pfam_Involucrin_rpt	pfam_Involucrin_N,pfam_Involucrin_rpt	-	no_errors	IVL	HGNC	ENSG00000163207	tier1	-	-	115	0	0.00	98	8	7.34
KAT6A	0	genome.wustl.edu	37	8	41800501	41800501	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	8	41800501	41800501	C	T	SNP	KAT6A	ENST00000265713	human	ensembl	74_37	-1	known	missense	c.2246	p.R749Q	1.000	superfamily_Acyl_CoA_acyltransferase	pfam_MOZ_SAS,pfam_Znf_PHD-finger,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6A	HGNC	ENSG00000083168	tier1	-	-	65	0	0.00	58	6	9.38
KCND2	0	genome.wustl.edu	37	7	119915139	119915139	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	119915139	119915139	C	T	SNP	KCND2	ENST00000331113	human	ensembl	74_37	+1	known	silent	c.453	p.D151	0.859	prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.2	pfam_K_chnl_volt-dep_Kv4_C,pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_Shal-type,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.2,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND2	HGNC	ENSG00000184408	tier1	-	-	21	0	0.00	4	9	69.23
KCNT2	0	genome.wustl.edu	37	1	196397362	196397362	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	196397362	196397362	T	C	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.857	p.K286R	1.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687	tier1	-	-	31	0	0.00	16	7	30.43
KIF26B	0	genome.wustl.edu	37	1	245851229	245851231	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	245851229	245851231	CAG	-	DEL	KIF26B	ENST00000407071	human	ensembl	74_37	+1	known	in_frame_del	c.4944_4946	p.S1652in_frame_del	0.206:0.210:0.240	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF26B	HGNC	ENSG00000162849	tier1			32	0	0.00	10	2	16.67
KLHDC10	0	genome.wustl.edu	37	7	129736765	129736765	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	129736765	129736765	G	T	SNP	KLHDC10	ENST00000335420	human	ensembl	74_37	+1	known	missense	c.171	p.K57N	1.000	NULL	pfam_Kelch_1,pfam_Kelch_2,smart_Kelch_1	-	no_errors	KLHDC10	HGNC	ENSG00000128607				37	0	0.00	52	3	5.45
KLHL32	0	genome.wustl.edu	37	6	97423886	97423886	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	97423886	97423886	C	T	SNP	KLHL32	ENST00000369261	human	ensembl	74_37	+1	known	silent	c.37	p.L13	1.000	pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL32	HGNC	ENSG00000186231				60	0	0.00	30	2	6.25
KLHL38	0	genome.wustl.edu	37	8	124663967	124663967	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	8	124663967	124663967	G	A	SNP	KLHL38	ENST00000325995	human	ensembl	74_37	-1	known	silent	c.1200	p.S400	0.986	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL38	HGNC	ENSG00000175946				24	0	0.00	35	2	5.41
KLKP1	0	genome.wustl.edu	37	19	51391637	51391637	+	RNA	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	51391637	51391637	C	T	SNP	KLKP1	ENST00000600104	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	KLKP1	HGNC	ENSG00000197588				15	0	0.00	13	4	23.53
KMT2D	0	genome.wustl.edu	37	12	49445673	49445673	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	49445673	49445673	C	T	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.1793	p.R598H	0.138	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	76	0	0.00	60	8	11.76
KPNA1	0	genome.wustl.edu	37	3	122180154	122180154	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	122180154	122180154	G	T	SNP	KPNA1	ENST00000344337	human	ensembl	74_37	-1	known	missense	c.349	p.P117T	1.000	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,pfam_Importin-a_IBB,pfam_HEAT,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA1	HGNC	ENSG00000114030				59	0	0.00	48	3	5.88
KRT13	0	genome.wustl.edu	37	17	39659587	39659587	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	39659587	39659587	G	T	SNP	KRT13	ENST00000246635	human	ensembl	74_37	-1	known	silent	c.687	p.I229	0.870	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT13	HGNC	ENSG00000171401				84	0	0.00	47	3	6.00
KRTAP11-1	0	genome.wustl.edu	37	21	32253565	32253565	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	21	32253565	32253565	G	T	SNP	KRTAP11-1	ENST00000332378	human	ensembl	74_37	-1	known	silent	c.279	p.S93	0.533	pfam_KRTAP_PMG	pfam_KRTAP_PMG	-	no_errors	KRTAP11-1	HGNC	ENSG00000182591				25	0	0.00	13	2	13.33
KRTAP19-4	0	genome.wustl.edu	37	21	31869189	31869189	+	Silent	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	21	31869189	31869189	A	G	SNP	KRTAP19-4	ENST00000334058	human	ensembl	74_37	-1	known	silent	c.240	p.N80	0.000	NULL	pfam_KRTAP_type6/8/16/19/20	-	no_errors	KRTAP19-4	HGNC	ENSG00000186967	tier1	-	-	127	0	0.00	59	9	13.24
KY	0	genome.wustl.edu	37	3	134348480	134348480	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	134348480	134348480	T	G	SNP	KY	ENST00000423778	human	ensembl	74_37	-1	known	missense	c.320	p.K107T	1.000	NULL	pfam_Transglutaminase-like,smart_Transglutaminase-like	-	no_errors	KY	HGNC	ENSG00000174611	tier1	-	-	29	0	0.00	28	7	20.00
L1TD1	0	genome.wustl.edu	37	1	62676046	62676046	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	62676046	62676046	G	T	SNP	L1TD1	ENST00000498273	human	ensembl	74_37	+1	known	nonsense	c.1600	p.E534*	0.000	pfam_Transposase_22	pfam_Transposase_22,superfamily_STAT_TF_coiled-coil	-	no_errors	L1TD1	HGNC	ENSG00000240563	tier1	-	-	46	0	0.00	36	4	10.00
LBH	0	genome.wustl.edu	37	2	30457270	30457270	+	Splice_Site	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	30457270	30457270	G	A	SNP	LBH	ENST00000395323	human	ensembl	74_37	+1	known	splice_site	c.27-1	e2-1	1.000	-	-	-	no_errors	LBH	HGNC	ENSG00000213626				91	0	0.00	59	4	6.35
LCN9	0	genome.wustl.edu	37	9	138555211	138555211	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	138555211	138555211	C	T	SNP	LCN9	ENST00000277526	human	ensembl	74_37	+1	known	missense	c.44	p.A15V	0.544	NULL	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Maj_urinary,prints_Odour-bd,prints_Blactoglobulin	-	no_errors	LCN9	HGNC	ENSG00000148386				78	0	0.00	51	4	7.27
LGALS2	0	genome.wustl.edu	37	22	37966318	37966318	+	Silent	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	22	37966318	37966318	C	A	SNP	LGALS2	ENST00000215886	human	ensembl	74_37	-1	known	silent	c.351	p.L117	0.064	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	-	no_errors	LGALS2	HGNC	ENSG00000100079				47	0	0.00	40	3	6.98
LINC00085	0	genome.wustl.edu	37	19	52197753	52197753	+	RNA	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	52197753	52197753	G	T	SNP	LINC00085	ENST00000573266	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LINC00085	HGNC	ENSG00000182310	tier1	-	-	27	0	0.00	19	4	17.39
LINC00937	0	genome.wustl.edu	37	12	8543176	8543176	+	RNA	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	8543176	8543176	G	T	SNP	LINC00937	ENST00000420040	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	LINC00937	HGNC	ENSG00000226091				10	0	0.00	9	13	59.09
LINC01020	0	genome.wustl.edu	37	5	5057986	5057986	+	RNA	SNP	A	A	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	5057986	5057986	A	C	SNP	LINC01020	ENST00000507599	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC01020	HGNC	ENSG00000215231	tier1	-	-	41	0	0.00	38	16	29.63
LINGO1	0	genome.wustl.edu	37	15	77907463	77907463	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	15	77907463	77907463	G	T	SNP	LINGO1	ENST00000355300	human	ensembl	74_37	-1	known	silent	c.786	p.G262	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LINGO1	HGNC	ENSG00000169783	tier1	-	-	87	0	0.00	64	4	5.88
LIPT2	0	genome.wustl.edu	37	11	74203390	74203390	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	74203390	74203390	G	T	SNP	LIPT2	ENST00000310109	human	ensembl	74_37	-1	known	missense	c.486	p.H162Q	1.000	pfam_BPL_LipA_LipB,tigrfam_Octanoyltransferase	pfam_BPL_LipA_LipB,tigrfam_Octanoyltransferase	-	no_errors	LIPT2	HGNC	ENSG00000175536	tier1	-	-	83	0	0.00	45	4	8.16
LLGL2	0	genome.wustl.edu	37	17	73552199	73552199	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	73552199	73552199	G	A	SNP	LLGL2	ENST00000392550	human	ensembl	74_37	+1	known	missense	c.148	p.G50S	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_LLGL2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,prints_Lethal2_giant	-	no_errors	LLGL2	HGNC	ENSG00000073350	tier1	-	-	177	0	0.00	200	14	6.54
LOC100506060	0	genome.wustl.edu	37	16	70253497	70253497	+	RNA	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	16	70253497	70253497	C	T	SNP	LOC100506060	ENST00000573141	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-296I10.6	Clone_based_vega_gene	ENSG00000261556				11	0	0.00	11	3	21.43
LOC101927285	0	genome.wustl.edu	37	2	59504864	59504865	+	RNA	DEL	TG	TG	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	59504864	59504865	TG	0	DEL	LOC101927285	ENST00000409590	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.139:0.134	-	-	-	no_errors	AC007131.1	Clone_based_vega_gene	ENSG00000222030				8	0	0.00	6	2	25.00
LOC101930008	0	genome.wustl.edu	37	16	16414934	16414934	+	RNA	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	16	16414934	16414934	C	T	SNP	LOC101930008	ENST00000536260	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.036	-	-	-	no_errors	AC138969.4	Clone_based_vega_gene	ENSG00000183889	tier1	-	-	65	0	0.00	32	7	17.95
LRIG2	0	genome.wustl.edu	37	1	113667283	113667283	+	RNA	DEL	T	T	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	113667283	113667283	T	-	DEL	LRIG2	ENST00000466161	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	LRIG2	HGNC	ENSG00000198799	tier1			10	0	0.00	8	3	27.27
LRRC55	0	genome.wustl.edu	37	11	56949646	56949646	+	Silent	SNP	T	T	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	56949646	56949646	T	C	SNP	LRRC55	ENST00000497933	human	ensembl	74_37	+1	known	silent	c.279	p.D93	0.906	pfam_LRR-contain_N,smart_LRR-contain_N	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC55	HGNC	ENSG00000183908	tier1	-	-	115	0	0.00	62	26	29.55
LRRK2	0	genome.wustl.edu	37	12	40716130	40716130	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	40716130	40716130	T	A	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	missense	c.5327	p.L1776H	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1	-	-	84	0	0.00	72	6	7.69
LTBP3	0	genome.wustl.edu	37	11	65320651	65320651	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	65320651	65320651	G	T	SNP	LTBP3	ENST00000301873	human	ensembl	74_37	-1	known	missense	c.1047	p.N349K	1.000	superfamily_TB_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP3	HGNC	ENSG00000168056	tier1	-	-	65	0	0.00	56	4	6.67
LZTS1	0	genome.wustl.edu	37	8	20110624	20110624	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	8	20110624	20110624	C	T	SNP	LZTS1	ENST00000265801	human	ensembl	74_37	-1	known	missense	c.818	p.R273K	1.000	NULL	NULL	-	no_errors	LZTS1	HGNC	ENSG00000061337	tier1	-	-	55	0	0.00	83	5	5.68
MACC1	0	genome.wustl.edu	37	7	20201457	20201457	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	20201457	20201457	C	G	SNP	MACC1	ENST00000332878	human	ensembl	74_37	-1	known	missense	c.29	p.R10P	0.000	NULL	pfam_SH3_2,superfamily_DEATH-like_dom	-	no_errors	MACC1	HGNC	ENSG00000183742	tier1	-	-	49	0	0.00	51	5	8.77
MADD	0	genome.wustl.edu	37	11	47304039	47304039	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	47304039	47304039	G	T	SNP	MADD	ENST00000311027	human	ensembl	74_37	+1	known	missense	c.1577	p.G526V	1.000	pfam_dDENN_dom,smart_dDENN_dom,pfscan_dDENN_dom	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	MADD	HGNC	ENSG00000110514				61	0	0.00	65	4	5.80
MAG	0	genome.wustl.edu	37	19	35801001	35801001	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	35801001	35801001	G	A	SNP	MAG	ENST00000392213	human	ensembl	74_37	+1	known	missense	c.1456	p.V486I	0.999	NULL	pfam_Ig_I-set,pfam_CD80_C2-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MAG	HGNC	ENSG00000105695	tier1	rs142036180	-	33	0	0.00	34	8	19.05
MAMDC4	0	genome.wustl.edu	37	9	139750588	139750588	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	139750588	139750588	G	T	SNP	MAMDC4	ENST00000445819	human	ensembl	74_37	+1	known	missense	c.1707	p.Q569H	0.001	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_MAM_dom,pfam_LDrepeatLR_classA_rpt,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_MAM_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	MAMDC4	HGNC	ENSG00000177943				59	0	0.00	52	4	7.14
MAMDC4	0	genome.wustl.edu	37	9	139751001	139751001	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	139751001	139751001	C	T	SNP	MAMDC4	ENST00000445819	human	ensembl	74_37	+1	known	missense	c.1931	p.P644L	0.606	superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_MAM_dom,pfam_LDrepeatLR_classA_rpt,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_MAM_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	MAMDC4	HGNC	ENSG00000177943				24	0	0.00	36	4	10.00
MARK1	0	genome.wustl.edu	37	1	220825486	220825486	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	220825486	220825486	G	T	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	missense	c.1730	p.R577L	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141	tier1	-	-	55	0	0.00	45	4	8.16
MARK2	0	genome.wustl.edu	37	11	63670095	63670095	+	Silent	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	63670095	63670095	C	A	SNP	MARK2	ENST00000402010	human	ensembl	74_37	+1	known	silent	c.1257	p.T419	0.997	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MARK2	HGNC	ENSG00000072518				120	0	0.00	74	4	5.13
MATN4	0	genome.wustl.edu	37	20	43933303	43933303	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	20	43933303	43933303	C	T	SNP	MATN4	ENST00000372754	human	ensembl	74_37	-1	known	missense	c.208	p.A70T	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_EGF-like_Ca-bd_dom,pfam_Matrilin_coiled-coil_trimer,smart_VWF_A,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_VWF_A	-	no_errors	MATN4	HGNC	ENSG00000124159	tier1	-	-	21	0	0.00	30	7	18.92
MCF2	0	genome.wustl.edu	37	X	138667261	138667261	+	Silent	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	X	138667261	138667261	A	G	SNP	MCF2	ENST00000370578	human	ensembl	74_37	-1	known	silent	c.3144	p.T1048	0.000	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	MCF2	HGNC	ENSG00000101977	tier1	-	-	51	0	0.00	41	20	32.26
MECOM	0	genome.wustl.edu	37	3	168819859	168819859	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	168819859	168819859	G	T	SNP	MECOM	ENST00000494292	human	ensembl	74_37	-1	known	silent	c.2733	p.R911	1.000	pfam_Znf_BED_prd	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	MECOM	HGNC	ENSG00000085276	tier1	-	-	53	0	0.00	54	6	10.00
MEGF6	0	genome.wustl.edu	37	1	3425796	3425796	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	3425796	3425796	C	T	SNP	MEGF6	ENST00000356575	human	ensembl	74_37	-1	known	silent	c.1371	p.P457	0.000	NULL	pfam_EGF_laminin,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF6	HGNC	ENSG00000162591	tier1	-	-	19	0	0.00	16	4	20.00
METTL13	0	genome.wustl.edu	37	1	171761202	171761202	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	171761202	171761202	T	C	SNP	METTL13	ENST00000361735	human	ensembl	74_37	+1	known	missense	c.1520	p.L507P	1.000	NULL	pfam_Methyltransf_11,pfam_Spermidine/spermine_synthase	-	no_errors	METTL13	HGNC	ENSG00000010165				51	0	0.00	58	4	6.45
MGAT3	0	genome.wustl.edu	37	22	39884893	39884893	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	22	39884893	39884893	G	A	SNP	MGAT3	ENST00000341184	human	ensembl	74_37	+1	known	missense	c.1541	p.R514H	0.012	NULL	pfam_Glyco_trans_17	-	no_errors	MGAT3	HGNC	ENSG00000128268				19	0	0.00	20	3	13.04
MIR1200	0	genome.wustl.edu	37	7	36958972	36958972	+	RNA	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	36958972	36958972	G	T	SNP	MIR1200	ENST00000408398	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR1200	HGNC	ENSG00000221325	tier1	-	-	51	0	0.00	69	4	5.48
MIR600HG	0	genome.wustl.edu	37	9	125874236	125874236	+	RNA	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	125874236	125874236	G	T	SNP	MIR600HG	ENST00000449175	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	MIR600HG	HGNC	ENSG00000236901	tier1	-	-	80	0	0.00	55	4	6.78
MLKL	0	genome.wustl.edu	37	16	74716588	74716588	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	16	74716588	74716588	C	T	SNP	MLKL	ENST00000308807	human	ensembl	74_37	-1	known	missense	c.917	p.R306H	0.127	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MLKL	HGNC	ENSG00000168404				50	0	0.00	44	3	6.38
MLLT6	0	genome.wustl.edu	37	17	36873150	36873150	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	36873150	36873150	G	A	SNP	MLLT6	ENST00000325718	human	ensembl	74_37	+1	known	missense	c.1567	p.G523S	0.943	NULL	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MLLT6	HGNC	ENSG00000108292	tier1	-	-	96	0	0.00	59	6	9.23
MLPH	0	genome.wustl.edu	37	2	238402114	238402114	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	238402114	238402114	C	T	SNP	MLPH	ENST00000264605	human	ensembl	74_37	+1	known	silent	c.45	p.A15	0.987	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	pfam_Myrip/Melanophilin,superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	-	no_errors	MLPH	HGNC	ENSG00000115648				64	0	0.00	47	4	7.84
MOB3C	0	genome.wustl.edu	37	1	47080726	47080726	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	47080726	47080726	G	T	SNP	MOB3C	ENST00000271139	human	ensembl	74_37	-1	known	missense	c.23	p.A8D	0.000	NULL	pfam_Mob1_phocein,superfamily_Mob1_phocein	-	no_errors	MOB3C	HGNC	ENSG00000142961	tier1	-	-	62	0	0.00	51	4	7.27
MRC1	0	genome.wustl.edu	37	10	18145181	18145181	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	10	18145181	18145181	G	T	SNP	MRC1	ENST00000239761	human	ensembl	74_37	+1	known	missense	c.1418	p.W473L	1.000	pfam_C-type_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,pfam_Ricin_B_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin,prints_AntifreezeII	-	no_errors	MRC1	HGNC	ENSG00000120586	tier1	-	-	25	0	0.00	15	4	21.05
MRPL16	0	genome.wustl.edu	37	11	59577339	59577339	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	59577339	59577339	G	T	SNP	MRPL16	ENST00000300151	human	ensembl	74_37	-1	known	missense	c.110	p.P37Q	0.987	NULL	pfam_Ribosomal_L10e/L16,superfamily_Ribosomal_L10e/L16,prints_Ribosomal_L16	-	no_errors	MRPL16	HGNC	ENSG00000166902	tier1	-	-	68	0	0.00	38	4	9.52
MRPL22	0	genome.wustl.edu	37	5	154336728	154336728	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	154336728	154336728	C	A	SNP	MRPL22	ENST00000523037	human	ensembl	74_37	+1	known	missense	c.295	p.Q99K	1.000	pfam_Ribosomal_L22,superfamily_Ribosomal_L22	pfam_Ribosomal_L22,superfamily_Ribosomal_L22	-	no_errors	MRPL22	HGNC	ENSG00000082515	tier1	-	-	88	0	0.00	76	4	5.00
MRPS14	0	genome.wustl.edu	37	1	174987553	174987553	+	Splice_Site	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	174987553	174987553	C	T	SNP	MRPS14	ENST00000476371	human	ensembl	74_37	-1	known	splice_site	c.204+1	e2+1	1.000	-	-	-	no_errors	MRPS14	HGNC	ENSG00000120333	tier1	-	-	62	0	0.00	65	4	5.80
MTUS2	0	genome.wustl.edu	37	13	29933537	29933537	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	13	29933537	29933537	C	T	SNP	MTUS2	ENST00000431530	human	ensembl	74_37	+1	known	missense	c.3074	p.A1025V	0.000	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938	tier1	rs201118258	-	77	0	0.00	48	13	21.31
MUC12	0	genome.wustl.edu	37	7	100635141	100635141	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	100635141	100635141	C	G	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.1297	p.R433G	0.145	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	132	0	0.00	63	51	44.74
MUC2	0	genome.wustl.edu	37	11	1103846	1103846	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	1103846	1103846	C	T	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	silent	c.8145	p.T2715	0.003	smart_Cys_knot_C,pfscan_Cys_knot_C	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788	tier1	-	-	63	0	0.00	55	5	8.33
MUC6	0	genome.wustl.edu	37	11	1016412	1016414	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	1016412	1016414	GAG	-	DEL	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	in_frame_del	c.6389_6387	p.S2130in_frame_del	0.002:0.002:0.018	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956	tier1			55	0	0.00	25	5	16.67
MYBPC2	0	genome.wustl.edu	37	19	50944200	50944200	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	50944200	50944200	G	A	SNP	MYBPC2	ENST00000357701	human	ensembl	74_37	+1	known	silent	c.636	p.P212	0.995	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC2	HGNC	ENSG00000086967	tier1	-	-	54	0	0.00	41	4	8.89
MYCBP2	0	genome.wustl.edu	37	13	77740653	77740653	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	13	77740653	77740653	C	T	SNP	MYCBP2	ENST00000407578	human	ensembl	74_37	-1	known	missense	c.6151	p.E2051K	1.000	superfamily_ARM-type_fold	pfam_PHR,pfam_Reg_chr_condens,pfam_Filamin/ABP280_repeat-like,superfamily_RCC1/BLIP-II,superfamily_Galactose-bd-like,superfamily_Ig_E-set,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_RING,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	MYCBP2	HGNC	ENSG00000005810				24	0	0.00	28	2	6.67
MYEOV	0	genome.wustl.edu	37	11	69063836	69063836	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	69063836	69063836	C	A	SNP	MYEOV	ENST00000308946	human	ensembl	74_37	+1	known	missense	c.919	p.L307I	0.000	NULL	NULL	-	no_errors	MYEOV	HGNC	ENSG00000172927				25	0	0.00	19	3	13.64
MYO10	0	genome.wustl.edu	37	5	16701589	16701589	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	16701589	16701589	G	T	SNP	MYO10	ENST00000513610	human	ensembl	74_37	-1	known	missense	c.2915	p.A972D	0.011	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_Pleckstrin_homology,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_Ras-assoc,superfamily_P-loop_NTPase,superfamily_FERM_central,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology,prints_Myosin_head_motor_dom	-	no_errors	MYO10	HGNC	ENSG00000145555				32	0	0.00	40	4	9.09
MYO18B	0	genome.wustl.edu	37	22	26348261	26348261	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	22	26348261	26348261	G	T	SNP	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	missense	c.5842	p.A1948S	0.999	NULL	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tRNA-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454	tier1	-	-	39	0	0.00	33	4	10.81
MYOM2	0	genome.wustl.edu	37	8	2000309	2000309	+	Silent	SNP	C	C	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	8	2000309	2000309	C	G	SNP	MYOM2	ENST00000262113	human	ensembl	74_37	+1	known	silent	c.141	p.S47	0.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM2	HGNC	ENSG00000036448	tier1	-	-	44	0	0.00	32	5	13.51
MYT1L	0	genome.wustl.edu	37	2	1926321	1926321	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	1926321	1926321	T	C	SNP	MYT1L	ENST00000399161	human	ensembl	74_37	-1	known	missense	c.1220	p.E407G	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1L	HGNC	ENSG00000186487	tier1	-	-	51	0	0.00	41	13	24.07
NAA15	0	genome.wustl.edu	37	4	140291507	140291507	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	4	140291507	140291507	T	G	SNP	NAA15	ENST00000296543	human	ensembl	74_37	+1	known	missense	c.1896	p.D632E	1.000	pirsf_NatA_aux_su	pfam_NatA_aux_su,smart_TPR_repeat,pirsf_NatA_aux_su,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NAA15	HGNC	ENSG00000164134	tier1	-	-	48	0	0.00	48	8	14.29
NAA20	0	genome.wustl.edu	37	20	20013263	20013263	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	20	20013263	20013263	G	T	SNP	NAA20	ENST00000334982	human	ensembl	74_37	+1	known	silent	c.417	p.S139	0.618	superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_GNAT_dom,pfam_FR47,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	NAA20	HGNC	ENSG00000173418	tier1	-	-	81	0	0.00	74	4	5.13
NAP1L2	0	genome.wustl.edu	37	X	72433664	72433666	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	X	72433664	72433666	TCC	-	DEL	NAP1L2	ENST00000373517	human	ensembl	74_37	-1	known	in_frame_del	c.665_663	p.E221in_frame_del	0.004:0.003:0.000	pfam_NAP_family	pfam_NAP_family	-	no_errors	NAP1L2	HGNC	ENSG00000186462	tier1			23	0	0.00	29	5	14.71
NEDD8	0	genome.wustl.edu	37	14	24686231	24686231	+	RNA	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	14	24686231	24686231	G	T	SNP	NEDD8	ENST00000526430	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NEDD8	HGNC	ENSG00000129559	tier1	-	-	32	0	0.00	37	4	9.76
NEK5	0	genome.wustl.edu	37	13	52636037	52636037	+	RNA	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	13	52636037	52636037	C	T	SNP	NEK5	ENST00000529080	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	NEK5	HGNC	ENSG00000197168	tier1	-	-	52	0	0.00	58	4	6.45
NME7	0	genome.wustl.edu	37	1	169256597	169256597	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	169256597	169256597	G	T	SNP	NME7	ENST00000367811	human	ensembl	74_37	-1	known	missense	c.698	p.T233N	1.000	pirsf_NDK7	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase,smart_Uncharacterised_DM10,smart_Nucleoside_diP_kinase,pirsf_NDK7,prints_Nucleoside_diP_kinase	-	no_errors	NME7	HGNC	ENSG00000143156	tier1	-	-	43	0	0.00	53	4	7.02
NOTCH3	0	genome.wustl.edu	37	19	15302299	15302299	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	15302299	15302299	G	A	SNP	NOTCH3	ENST00000263388	human	ensembl	74_37	-1	known	silent	c.972	p.F324	1.000	pirsf_Notch,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_dom,pfam_Notch_NODP_dom,pfam_Notch_NOD_dom,pfam_EGF_extracell,pfam_DUF3454_notch,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_3,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH3	HGNC	ENSG00000074181	tier1	rs149725987	-	51	0	0.00	38	10	20.83
NSD1	0	genome.wustl.edu	37	5	176638912	176638912	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	176638912	176638912	G	T	SNP	NSD1	ENST00000439151	human	ensembl	74_37	+1	known	missense	c.3512	p.R1171L	1.000	NULL	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	NSD1	HGNC	ENSG00000165671				44	0	0.00	32	2	5.71
NSD1	0	genome.wustl.edu	37	5	176719030	176719030	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	176719030	176719030	G	A	SNP	NSD1	ENST00000439151	human	ensembl	74_37	+1	known	missense	c.6334	p.E2112K	1.000	superfamily_Znf_FYVE_PHD	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	NSD1	HGNC	ENSG00000165671				54	0	0.00	43	3	6.52
NUP153	0	genome.wustl.edu	37	6	17633076	17633076	+	Splice_Site	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	17633076	17633076	C	A	SNP	NUP153	ENST00000537253	human	ensembl	74_37	-1	known	splice_site	c.2558-1	e18-1	0.996	-	-	-	no_errors	NUP153	HGNC	ENSG00000124789	tier1	-	-	33	0	0.00	27	8	22.86
OR10X1	0	genome.wustl.edu	37	1	158549213	158549213	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	158549213	158549213	T	G	SNP	OR10X1	ENST00000368150	human	ensembl	74_37	-1	known	missense	c.477	p.Q159H	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10X1	HGNC	ENSG00000186400	tier1	-	-	36	0	0.00	34	6	15.00
OR2C3	0	genome.wustl.edu	37	1	247695607	247695607	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	247695607	247695607	G	T	SNP	OR2C3	ENST00000366487	human	ensembl	74_37	-1	known	missense	c.207	p.F69L	0.998	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2C3	HGNC	ENSG00000196242	tier1	-	-	72	0	0.00	68	4	5.56
OR2D3	0	genome.wustl.edu	37	11	6943185	6943185	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	6943185	6943185	G	T	SNP	OR2D3	ENST00000317834	human	ensembl	74_37	+1	known	missense	c.953	p.R318M	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2D3	HGNC	ENSG00000178358	tier1	-	-	56	0	0.00	48	4	7.69
OR2M4	0	genome.wustl.edu	37	1	248403118	248403118	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	248403118	248403118	A	C	SNP	OR2M4	ENST00000306687	human	ensembl	74_37	+1	known	missense	c.888	p.E296D	0.462	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M4	HGNC	ENSG00000171180	tier1	-	-	28	0	0.00	26	8	23.53
OR2T6	0	genome.wustl.edu	37	1	248551763	248551763	+	Nonsense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	248551763	248551763	T	G	SNP	OR2T6	ENST00000355728	human	ensembl	74_37	+1	known	nonsense	c.854	p.L285*	0.740	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR2T6	HGNC	ENSG00000198104	tier1	-	-	39	0	0.00	24	12	33.33
OR4C13	0	genome.wustl.edu	37	11	49974054	49974054	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	49974054	49974054	T	A	SNP	OR4C13	ENST00000555099	human	ensembl	74_37	+1	known	missense	c.80	p.V27D	0.001	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C13	HGNC	ENSG00000258817	tier1	-	-	73	0	0.00	45	6	11.76
OR4C6	0	genome.wustl.edu	37	11	55433080	55433080	+	Silent	SNP	T	T	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	55433080	55433080	T	C	SNP	OR4C6	ENST00000314259	human	ensembl	74_37	+1	known	silent	c.438	p.A146	0.913	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C6	HGNC	ENSG00000181903	tier1	-	-	69	0	0.00	55	5	8.33
OR5A2	0	genome.wustl.edu	37	11	59189883	59189883	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	59189883	59189883	G	T	SNP	OR5A2	ENST00000302040	human	ensembl	74_37	-1	known	missense	c.544	p.L182I	0.926	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5A2	HGNC	ENSG00000172324				37	0	0.00	33	2	5.71
OR6M1	0	genome.wustl.edu	37	11	123676267	123676267	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	123676267	123676267	G	T	SNP	OR6M1	ENST00000309154	human	ensembl	74_37	-1	known	nonsense	c.791	p.S264*	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6M1	HGNC	ENSG00000196099	tier1	-	-	59	0	0.00	42	10	19.23
OR6Y1	0	genome.wustl.edu	37	1	158517076	158517076	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	158517076	158517076	T	A	SNP	OR6Y1	ENST00000302617	human	ensembl	74_37	-1	known	missense	c.820	p.N274Y	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6Y1	HGNC	ENSG00000197532	tier1	-	-	52	0	0.00	37	12	24.49
OR8H1	0	genome.wustl.edu	37	11	56058494	56058494	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	56058494	56058494	C	T	SNP	OR8H1	ENST00000313022	human	ensembl	74_37	-1	known	silent	c.45	p.T15	0.002	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8H1	HGNC	ENSG00000181693				41	0	0.00	34	3	8.11
PALB2	0	genome.wustl.edu	37	16	23646351	23646351	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	16	23646351	23646351	G	T	SNP	PALB2	ENST00000261584	human	ensembl	74_37	-1	known	missense	c.1516	p.Q506K	0.000	NULL	superfamily_WD40_repeat_dom	-	no_errors	PALB2	HGNC	ENSG00000083093	tier1	-	-	91	0	0.00	71	4	5.33
PCDH15	0	genome.wustl.edu	37	10	55582052	55582052	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	10	55582052	55582052	G	A	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	missense	c.5434	p.P1812S	0.060	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275				27	0	0.00	8	4	33.33
PCDHB7	0	genome.wustl.edu	37	5	140552670	140552670	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	140552670	140552670	T	G	SNP	PCDHB7	ENST00000231137	human	ensembl	74_37	+1	known	missense	c.254	p.L85R	0.004	pfam_Cadherin_N,superfamily_Cadherin-like,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB7	HGNC	ENSG00000113212	tier1	-	-	51	0	0.00	38	7	15.56
PCDHB8	0	genome.wustl.edu	37	5	140559406	140559406	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	140559406	140559406	G	A	SNP	PCDHB8	ENST00000239444	human	ensembl	74_37	+1	known	silent	c.1791	p.S597	0.956	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB8	HGNC	ENSG00000120322				191	0	0.00	124	10	7.41
PCDHGC3	0	genome.wustl.edu	37	5	140857013	140857013	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	140857013	140857013	C	T	SNP	PCDHGC3	ENST00000308177	human	ensembl	74_37	+1	known	missense	c.1330	p.R444C	0.007	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC3	HGNC	ENSG00000240184				74	0	0.00	36	2	5.26
PDCD11	0	genome.wustl.edu	37	10	105193741	105193741	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	10	105193741	105193741	G	T	SNP	PDCD11	ENST00000369797	human	ensembl	74_37	+1	known	missense	c.3511	p.A1171S	0.989	superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,pfscan_Rbsml_prot_S1_RNA-bd_dom	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Suf,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_HAT,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,prints_Ribosomal_S1	-	no_errors	PDCD11	HGNC	ENSG00000148843				86	0	0.00	46	4	7.84
PDE7B	0	genome.wustl.edu	37	6	136468525	136468525	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	136468525	136468525	A	G	SNP	PDE7B	ENST00000308191	human	ensembl	74_37	+1	known	missense	c.203	p.K68R	1.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE7B	HGNC	ENSG00000171408	tier1	-	-	58	0	0.00	47	4	7.84
PDZD2	0	genome.wustl.edu	37	5	32074390	32074390	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	32074390	32074390	A	G	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.3178	p.T1060A	0.001	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	tier1	-	-	46	0	0.00	29	11	27.50
PDZD2	0	genome.wustl.edu	37	5	32077649	32077649	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	32077649	32077649	G	T	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.3619	p.A1207S	0.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401				33	0	0.00	27	3	10.00
PFKL	0	genome.wustl.edu	37	21	45725224	45725224	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	21	45725224	45725224	G	T	SNP	PFKL	ENST00000403390	human	ensembl	74_37	+1	known	missense	c.14	p.G5V	0.000	pirsf_6-phosphofructokinase_euk	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,prints_Phosphofructokinase,tigrfam_6-phosphofructokinase_euk	-	no_errors	PFKL	HGNC	ENSG00000141959	tier1	-	-	91	0	0.00	45	4	8.16
PGBD1	0	genome.wustl.edu	37	6	28264657	28264657	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	28264657	28264657	G	T	SNP	PGBD1	ENST00000259883	human	ensembl	74_37	+1	known	missense	c.707	p.S236I	0.004	superfamily_Krueppel-associated_box	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,pfscan_SRCR,pfscan_Tscrpt_reg_SCAN	-	no_errors	PGBD1	HGNC	ENSG00000137338				53	0	0.00	49	3	5.77
PHGDH	0	genome.wustl.edu	37	1	120277963	120277963	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	120277963	120277963	G	A	SNP	PHGDH	ENST00000369409	human	ensembl	74_37	+1	known	missense	c.689	p.R230H	0.882	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom,tigrfam_D-3-Phosphoglycerate_DH	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom,tigrfam_D-3-Phosphoglycerate_DH	-	no_errors	PHGDH	HGNC	ENSG00000092621	tier1	-	-	40	0	0.00	39	12	23.53
PHTF1	0	genome.wustl.edu	37	1	114248546	114248546	+	Frame_Shift_Del	DEL	A	A	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	114248546	114248546	A	-	DEL	PHTF1	ENST00000369604	human	ensembl	74_37	-1	known	frame_shift_del	c.1637	p.F546fs	1.000	NULL	pfam_TF_homeodomain_male	-	no_errors	PHTF1	HGNC	ENSG00000116793	tier1			28	0	0.00	43	3	6.52
PLA2G6	0	genome.wustl.edu	37	22	38565366	38565366	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	22	38565366	38565366	C	T	SNP	PLA2G6	ENST00000332509	human	ensembl	74_37	-1	known	missense	c.68	p.R23Q	1.000	NULL	pfam_Ankyrin_rpt,pfam_Patatin/PLipase_A2-rel,superfamily_Ankyrin_rpt-contain_dom,superfamily_Acyl_Trfase/lysoPLipase,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PLA2G6	HGNC	ENSG00000184381	tier1	-	-	31	0	0.00	13	6	31.58
PPP1R14D	0	genome.wustl.edu	37	15	41120652	41120652	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	15	41120652	41120652	C	A	SNP	PPP1R14D	ENST00000427255	human	ensembl	74_37	-1	known	missense	c.188	p.R63L	0.987	pfam_PP1_inhibitor,superfamily_PP1_inhibitor	pfam_PP1_inhibitor,superfamily_PP1_inhibitor	-	no_errors	PPP1R14D	HGNC	ENSG00000166143	tier1	-	-	78	0	0.00	41	11	21.15
PPP2R5C	0	genome.wustl.edu	37	14	102378890	102378891	+	RNA	INS	-	-	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	14	102378890	102378891	-	G	INS	PPP2R5C	ENST00000556218	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	PPP2R5C	HGNC	ENSG00000078304	tier1			16	0	0.00	14	4	22.22
PRB4	0	genome.wustl.edu	37	12	11462332	11462332	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	11462332	11462332	G	T	SNP	PRB4	ENST00000279575	human	ensembl	74_37	-1	known	missense	c.72	p.S24R	0.000	NULL	NULL	-	no_errors	PRB4	HGNC	ENSG00000230657	tier1	-	-	86	0	0.00	46	4	8.00
PRIM1	0	genome.wustl.edu	37	12	57127930	57127930	+	Splice_Site	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	57127930	57127930	C	T	SNP	PRIM1	ENST00000338193	human	ensembl	74_37	-1	known	splice_site	c.1243+1	e12+1	1.000	-	-	-	no_errors	PRIM1	HGNC	ENSG00000198056	tier1	-	-	33	0	0.00	42	4	8.70
PRKACG	0	genome.wustl.edu	37	9	71628850	71628850	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	71628850	71628850	G	T	SNP	PRKACG	ENST00000377276	human	ensembl	74_37	-1	known	silent	c.159	p.G53	0.974	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKACG	HGNC	ENSG00000165059	tier1	-	-	58	0	0.00	41	4	8.89
PROX1	0	genome.wustl.edu	37	1	214170645	214170645	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	214170645	214170645	A	C	SNP	PROX1	ENST00000261454	human	ensembl	74_37	+1	known	missense	c.767	p.K256T	1.000	pfam_Homeo_prospero_dom	pfam_Homeo_prospero_dom,superfamily_Homeodomain-like	-	no_errors	PROX1	HGNC	ENSG00000117707	tier1	-	-	21	0	0.00	15	5	25.00
PSAT1	0	genome.wustl.edu	37	9	80921272	80921272	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	80921272	80921272	C	G	SNP	PSAT1	ENST00000376588	human	ensembl	74_37	+1	known	missense	c.440	p.S147C	1.000	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,pirsf_Pser_aminoTfrase,tigrfam_Pser_aminoTfrase_subgr	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,pirsf_Pser_aminoTfrase,tigrfam_Pser_aminoTfrase_subgr	-	no_errors	PSAT1	HGNC	ENSG00000135069	tier1	-	-	59	0	0.00	34	15	30.61
PTPN22	0	genome.wustl.edu	37	1	114377580	114377580	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	114377580	114377580	G	T	SNP	PTPN22	ENST00000359785	human	ensembl	74_37	-1	known	missense	c.1846	p.P616T	1.000	pirsf_Non-rcpt_Tyr_Pase_8/22	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Non-rcpt_Tyr_Pase_8/22,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN22	HGNC	ENSG00000134242	tier1	-	-	61	0	0.00	44	4	8.33
PTPRQ	0	genome.wustl.edu	37	12	81063245	81063246	+	Splice_Site	INS	-	-	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	81063245	81063246	-	A	INS	PTPRQ	ENST00000266688	human	ensembl	74_37	+1	known	splice_site_ins	c.6441+2_6441+1	e46+2	1.000:1.000	-	-	-	no_errors	PTPRQ	HGNC	ENSG00000139304	tier1			33	0	0.00	23	4	14.81
PTPRQ	0	genome.wustl.edu	37	12	80935615	80935615	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	80935615	80935615	G	A	SNP	PTPRQ	ENST00000266688	human	ensembl	74_37	+1	known	missense	c.3424	p.E1142K	1.000	superfamily_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRQ	HGNC	ENSG00000139304				27	0	0.00	22	2	8.33
PXDN	0	genome.wustl.edu	37	2	1668815	1668815	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	1668815	1668815	G	T	SNP	PXDN	ENST00000252804	human	ensembl	74_37	-1	known	missense	c.1323	p.D441E	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDN	HGNC	ENSG00000130508	tier1	-	-	76	0	0.00	51	22	30.14
RABL6	0	genome.wustl.edu	37	9	139734633	139734635	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	139734633	139734635	AGA	-	DEL	RABL6	ENST00000371663	human	ensembl	74_37	+1	known	in_frame_del	c.1961_1963	p.K658in_frame_del	1.000:1.000:1.000	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Rab_type,prints_Small_GTPase	-	no_errors	RABL6	HGNC	ENSG00000196642	tier1			40	0	0.00	29	7	19.44
RAD54B	0	genome.wustl.edu	37	8	95390589	95390589	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	8	95390589	95390589	G	T	SNP	RAD54B	ENST00000336148	human	ensembl	74_37	-1	known	silent	c.2334	p.I778	0.994	pfam_HDA_complex_subunit-2/3,superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_HDA_complex_subunit-2/3,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54B	HGNC	ENSG00000197275				30	0	0.00	31	2	6.06
RAP1GAP2	0	genome.wustl.edu	37	17	2808623	2808623	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	2808623	2808623	G	A	SNP	RAP1GAP2	ENST00000254695	human	ensembl	74_37	+1	known	silent	c.126	p.R42	0.999	NULL	pfam_Rap_GAP_dom,pfscan_Rap_GAP_dom	-	no_errors	RAP1GAP2	HGNC	ENSG00000132359	tier1	-	-	88	0	0.00	46	4	8.00
RBBP6	0	genome.wustl.edu	37	16	24582975	24582975	+	Frame_Shift_Del	DEL	A	A	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	16	24582975	24582975	A	-	DEL	RBBP6	ENST00000319715	human	ensembl	74_37	+1	known	frame_shift_del	c.4588	p.S1532fs	0.967	NULL	pfam_DWNN_domain,pfam_Ubox_domain,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_CCHC	-	no_errors	RBBP6	HGNC	ENSG00000122257	tier1			31	0	0.00	36	2	5.26
RBM15B	0	genome.wustl.edu	37	3	51430822	51430824	+	In_Frame_Del	DEL	CCA	CCA	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	CCA	CCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	51430822	51430824	CCA	-	DEL	RBM15B	ENST00000323686	human	ensembl	74_37	+1	known	in_frame_del	c.1992_1994	p.H668in_frame_del	1.000:1.000:0.998	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC_like_C_dom,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	RBM15B	HGNC	ENSG00000179837	tier1			16	0	0.00	14	2	12.50
RECQL	0	genome.wustl.edu	37	12	21627896	21627896	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	21627896	21627896	C	T	SNP	RECQL	ENST00000421138	human	ensembl	74_37	-1	known	missense	c.1234	p.A412T	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_RQC_domain,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL	HGNC	ENSG00000004700	tier1	-	-	23	0	0.00	16	27	62.79
RECQL5	0	genome.wustl.edu	37	17	73626918	73626918	+	Splice_Site	SNP	C	C	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	73626918	73626918	C	G	SNP	RECQL5	ENST00000317905	human	ensembl	74_37	-1	known	splice_site	c.1586-1	e11-1	1.000	-	-	-	no_errors	RECQL5	HGNC	ENSG00000108469				38	0	0.00	32	3	8.33
RNF219	0	genome.wustl.edu	37	13	79190358	79190358	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	13	79190358	79190358	G	T	SNP	RNF219	ENST00000282003	human	ensembl	74_37	-1	known	missense	c.1538	p.S513Y	0.999	NULL	pfscan_Znf_RING	-	no_errors	RNF219	HGNC	ENSG00000152193				20	0	0.00	23	2	8.00
ROR2	0	genome.wustl.edu	37	9	94486191	94486191	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	94486191	94486191	T	A	SNP	ROR2	ENST00000375708	human	ensembl	74_37	-1	known	missense	c.2585	p.H862L	1.000	pirsf_Tyr_kinase_rcpt_ROR	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	ROR2	HGNC	ENSG00000169071	tier1	-	-	70	0	0.00	48	4	7.69
RPH3A	0	genome.wustl.edu	37	12	113285565	113285565	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	113285565	113285565	C	A	SNP	RPH3A	ENST00000389385	human	ensembl	74_37	+1	known	missense	c.148	p.L50M	1.000	pfam_Znf_FYVE-typ,superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	pfam_C2_dom,pfam_Znf_FYVE-typ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel,prints_Synaptotagmin,prints_C2_dom	-	no_errors	RPH3A	HGNC	ENSG00000089169	tier1	-	-	39	0	0.00	23	8	25.81
RPL3	0	genome.wustl.edu	37	22	39712982	39712982	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	22	39712982	39712982	G	T	SNP	RPL3	ENST00000420536	human	ensembl	74_37	-1	known	missense	c.410	p.A137D	1.000	pfam_Ribosomal_L3	pfam_Ribosomal_L3,superfamily_Transl_B-barrel	-	no_errors	RPL3	HGNC	ENSG00000100316	tier1	-	-	39	0	0.00	29	4	12.12
RPS11	0	genome.wustl.edu	37	19	50000798	50000798	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	50000798	50000798	G	T	SNP	RPS11	ENST00000270625	human	ensembl	74_37	+1	known	missense	c.169	p.D57Y	1.000	tigrfam_Ribosomal_S17_arc-typ	pfam_Ribosomal_S17,superfamily_NA-bd_OB-fold,prints_Ribosomal_S17,tigrfam_Ribosomal_S17_arc-typ	-	no_errors	RPS11	HGNC	ENSG00000142534	tier1	-	-	66	0	0.00	70	4	5.41
RRN3P2	0	genome.wustl.edu	37	16	29097556	29097557	+	RNA	INS	-	-	AT			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	16	29097556	29097557	-	AT	INS	RRN3P2	ENST00000427965	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997:1.000	-	-	-	no_errors	RRN3P2	HGNC	ENSG00000103472	tier1			47	0	0.00	33	2	5.71
RYR1	0	genome.wustl.edu	37	19	39019604	39019606	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	39019604	39019606	AGG	-	DEL	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	in_frame_del	c.11048_11050	p.E3687in_frame_del	1.000:1.000:1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218	tier1			21	0	0.00	34	4	10.53
SCEL	0	genome.wustl.edu	37	13	78146268	78146268	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	13	78146268	78146268	G	T	SNP	SCEL	ENST00000349847	human	ensembl	74_37	+1	known	missense	c.489	p.W163C	1.000	NULL	smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	SCEL	HGNC	ENSG00000136155	tier1	-	-	37	0	0.00	55	4	6.78
SCN2A	0	genome.wustl.edu	37	2	166245699	166245699	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	166245699	166245699	T	A	SNP	SCN2A	ENST00000283256	human	ensembl	74_37	+1	known	missense	c.5383	p.F1795I	1.000	prints_Na_channel_asu	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531	tier1	-	-	82	0	0.00	61	19	23.75
SCNN1G	0	genome.wustl.edu	37	16	23205507	23205507	+	Frame_Shift_Del	DEL	C	C	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	16	23205507	23205507	C	-	DEL	SCNN1G	ENST00000300061	human	ensembl	74_37	+1	known	frame_shift_del	c.825	p.H276fs	1.000	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	-	no_errors	SCNN1G	HGNC	ENSG00000166828	tier1			17	0	0.00	21	2	8.70
SDK1	0	genome.wustl.edu	37	7	4245555	4245555	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	4245555	4245555	G	A	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	missense	c.5143	p.A1715T	0.976	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555	tier1	-	-	35	0	0.00	34	4	10.53
SEC31A	0	genome.wustl.edu	37	4	83788384	83788384	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	4	83788384	83788384	G	T	SNP	SEC31A	ENST00000432794	human	ensembl	74_37	-1	known	nonsense	c.968	p.S323*	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC31A	HGNC	ENSG00000138674				38	0	0.00	33	2	5.71
SEMA5A	0	genome.wustl.edu	37	5	9337840	9337840	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	9337840	9337840	A	G	SNP	SEMA5A	ENST00000382496	human	ensembl	74_37	-1	known	missense	c.209	p.L70P	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Thrombospondin_1_rpt,superfamily_Semap_dom,superfamily_Thrombospondin_1_rpt,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Thrombospondin_1_rpt,pfscan_Semap_dom,pfscan_Thrombospondin_1_rpt	-	no_errors	SEMA5A	HGNC	ENSG00000112902	tier1	-	-	52	0	0.00	35	5	12.50
SETD9	0	genome.wustl.edu	37	5	56212655	56212655	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	56212655	56212655	G	T	SNP	SETD9	ENST00000285947	human	ensembl	74_37	+1	known	missense	c.826	p.V276F	1.000	NULL	NULL	-	no_errors	SETD9	HGNC	ENSG00000155542	tier1	-	-	110	0	0.00	64	4	5.88
SFMBT2	0	genome.wustl.edu	37	10	7326106	7326106	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	10	7326106	7326106	G	T	SNP	SFMBT2	ENST00000361972	human	ensembl	74_37	-1	known	silent	c.532	p.R178	1.000	smart_Mbt,pfscan_Mbt	pfam_Mbt,pfam_DUF3588,pfam_SAM_type1,pfam_Pointed_dom,superfamily_SAM/pointed,superfamily_ARM-type_fold,smart_Mbt,smart_SAM,pfscan_Mbt	-	no_errors	SFMBT2	HGNC	ENSG00000198879				42	0	0.00	38	2	5.00
SFXN1	0	genome.wustl.edu	37	5	174937167	174937167	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	174937167	174937167	G	A	SNP	SFXN1	ENST00000321442	human	ensembl	74_37	+1	known	missense	c.391	p.V131I	1.000	pfam_Mtc,tigrfam_Mtc	pfam_Mtc,tigrfam_Mtc	-	no_errors	SFXN1	HGNC	ENSG00000164466	tier1	-	-	106	0	0.00	66	4	5.71
SH3BP4	0	genome.wustl.edu	37	2	235950407	235950407	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	235950407	235950407	C	T	SNP	SH3BP4	ENST00000344528	human	ensembl	74_37	+1	known	missense	c.994	p.L332F	1.000	pfam_ZU5	pfam_SH3_2,pfam_SH3_domain,pfam_ZU5,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	SH3BP4	HGNC	ENSG00000130147	tier1	-	-	28	0	0.00	17	6	26.09
SIGLEC5	0	genome.wustl.edu	37	19	52115505	52115505	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	52115505	52115505	C	T	SNP	SIGLEC5	ENST00000222107	human	ensembl	74_37	-1	known	silent	c.1635	p.S545	0.189	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC5	HGNC	ENSG00000105501	tier1	-	-	72	0	0.00	30	9	23.08
SIRT2	0	genome.wustl.edu	37	19	39384519	39384519	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	39384519	39384519	G	A	SNP	SIRT2	ENST00000443898	human	ensembl	74_37	-1	known	silent	c.156	p.P52	0.883	NULL	NULL	-	no_errors	SIRT2	HGNC	ENSG00000068903	tier1	-	-	122	0	0.00	101	32	24.06
SLC30A5	0	genome.wustl.edu	37	5	68417624	68417624	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	68417624	68417624	C	T	SNP	SLC30A5	ENST00000396591	human	ensembl	74_37	+1	known	missense	c.1673	p.S558F	1.000	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A5	HGNC	ENSG00000145740				31	0	0.00	34	2	5.56
SLC30A8	0	genome.wustl.edu	37	8	118169955	118169955	+	Silent	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	8	118169955	118169955	C	A	SNP	SLC30A8	ENST00000456015	human	ensembl	74_37	+1	known	silent	c.444	p.I148	0.892	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A8	HGNC	ENSG00000164756	tier1	-	-	85	0	0.00	53	14	20.90
SLC35D1	0	genome.wustl.edu	37	1	67516184	67516184	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	67516184	67516184	C	A	SNP	SLC35D1	ENST00000235345	human	ensembl	74_37	-1	known	missense	c.396	p.L132F	1.000	NULL	pfam_Tpt_PEP_trans_dom	-	no_errors	SLC35D1	HGNC	ENSG00000116704	tier1	-	-	46	0	0.00	60	5	7.69
SLC35G6	0	genome.wustl.edu	37	17	7386176	7386176	+	Silent	SNP	G	G	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	7386176	7386176	G	C	SNP	SLC35G6	ENST00000412468	human	ensembl	74_37	+1	known	silent	c.873	p.V291	1.000	pfam_DMT	pfam_DMT	-	no_errors	SLC35G6	HGNC	ENSG00000259224	tier1	-	-	189	0	0.00	126	54	30.00
SLC39A2	0	genome.wustl.edu	37	14	21467630	21467630	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	14	21467630	21467630	C	A	SNP	SLC39A2	ENST00000298681	human	ensembl	74_37	+1	known	missense	c.25	p.L9I	0.501	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A2	HGNC	ENSG00000165794				71	0	0.00	35	2	5.41
SMCO3	0	genome.wustl.edu	37	12	14959109	14959109	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	14959109	14959109	C	T	SNP	SMCO3	ENST00000316048	human	ensembl	74_37	-1	known	missense	c.506	p.G169D	1.000	NULL	NULL	-	no_errors	SMCO3	HGNC	ENSG00000179256				73	0	0.00	58	4	6.45
SNAI2	0	genome.wustl.edu	37	8	49832485	49832485	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	8	49832485	49832485	A	C	SNP	SNAI2	ENST00000020945	human	ensembl	74_37	-1	known	missense	c.595	p.L199V	0.992	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI2	HGNC	ENSG00000019549	tier1	-	-	63	0	0.00	35	19	35.19
SOBP	0	genome.wustl.edu	37	6	107955614	107955614	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	107955614	107955614	C	T	SNP	SOBP	ENST00000317357	human	ensembl	74_37	+1	known	silent	c.1566	p.T522	1.000	NULL	NULL	-	no_errors	SOBP	HGNC	ENSG00000112320	tier1	-	-	70	0	0.00	42	6	12.50
SORBS1	0	genome.wustl.edu	37	10	97194450	97194450	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	10	97194450	97194450	C	T	SNP	SORBS1	ENST00000361941	human	ensembl	74_37	-1	known	missense	c.101	p.R34H	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain	-	no_errors	SORBS1	HGNC	ENSG00000095637	tier1	rs139115529	-	48	0	0.00	38	4	9.52
SOX10	0	genome.wustl.edu	37	22	38369997	38369997	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	22	38369997	38369997	C	T	SNP	SOX10	ENST00000360880	human	ensembl	74_37	-1	known	silent	c.906	p.P302	0.319	NULL	pfam_Sox_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX10	HGNC	ENSG00000100146				71	0	0.00	53	4	6.90
SP6	0	genome.wustl.edu	37	17	45925508	45925508	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	45925508	45925508	C	T	SNP	SP6	ENST00000342234	human	ensembl	74_37	-1	known	silent	c.288	p.L96	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP6	HGNC	ENSG00000189120	tier1	-	-	44	0	0.00	46	4	8.00
SPAG8	0	genome.wustl.edu	37	9	35808160	35808160	+	RNA	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	35808160	35808160	C	T	SNP	SPAG8	ENST00000463889	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SPAG8	HGNC	ENSG00000137098	tier1	-	-	82	0	0.00	69	4	5.48
SPTBN1	0	genome.wustl.edu	37	2	54864938	54864938	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	54864938	54864938	G	T	SNP	SPTBN1	ENST00000356805	human	ensembl	74_37	+1	known	nonsense	c.3856	p.E1286*	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN1	HGNC	ENSG00000115306	tier1	-	-	54	0	0.00	40	4	9.09
SPTBN2	0	genome.wustl.edu	37	11	66481592	66481592	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	66481592	66481592	A	G	SNP	SPTBN2	ENST00000309996	human	ensembl	74_37	-1	known	missense	c.626	p.L209P	1.000	pirsf_Spectrin_bsu,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN2	HGNC	ENSG00000173898	tier1	-	-	44	0	0.00	34	4	10.26
STAP2	0	genome.wustl.edu	37	19	4325487	4325487	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	4325487	4325487	G	T	SNP	STAP2	ENST00000600324	human	ensembl	74_37	-1	known	missense	c.885	p.D295E	0.740	NULL	pfscan_SH2	-	no_errors	STAP2	HGNC	ENSG00000178078				52	0	0.00	39	4	9.30
SZT2	0	genome.wustl.edu	37	1	43909268	43909268	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	43909268	43909268	C	T	SNP	SZT2	ENST00000562955	human	ensembl	74_37	+1	known	missense	c.8455	p.R2819W	1.000	NULL	NULL	-	no_errors	SZT2	HGNC	ENSG00000198198				19	0	0.00	25	2	7.41
TBC1D13	0	genome.wustl.edu	37	9	131553894	131553894	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	131553894	131553894	G	T	SNP	TBC1D13	ENST00000372648	human	ensembl	74_37	+1	known	silent	c.222	p.L74	1.000	superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D13	HGNC	ENSG00000107021				32	0	0.00	30	2	6.25
TCF4	0	genome.wustl.edu	37	18	53017614	53017614	+	Silent	SNP	T	T	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	18	53017614	53017614	T	C	SNP	TCF4	ENST00000398339	human	ensembl	74_37	-1	known	silent	c.831	p.K277	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TCF4	HGNC	ENSG00000196628	tier1	-	-	57	0	0.00	41	19	31.67
TCIRG1	0	genome.wustl.edu	37	11	67817454	67817454	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	67817454	67817454	A	G	SNP	TCIRG1	ENST00000265686	human	ensembl	74_37	+1	known	missense	c.2039	p.D680G	0.002	pfam_V-ATPase_116kDa_su	pfam_V-ATPase_116kDa_su	-	no_errors	TCIRG1	HGNC	ENSG00000110719	tier1	-	-	23	0	0.00	22	7	24.14
TCTE1	0	genome.wustl.edu	37	6	44253828	44253828	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	44253828	44253828	A	G	SNP	TCTE1	ENST00000371505	human	ensembl	74_37	-1	known	missense	c.719	p.L240P	1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	TCTE1	HGNC	ENSG00000146221	tier1	-	-	48	0	0.00	52	4	7.14
TDRD15	0	genome.wustl.edu	37	2	21365034	21365034	+	Silent	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	21365034	21365034	A	G	SNP	TDRD15	ENST00000405799	human	ensembl	74_37	+1	novel	silent	c.4695	p.K1565	0.000	pfam_Tudor	pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD15	HGNC	ENSG00000218819	tier1	-	-	37	0	0.00	18	9	33.33
THADA	0	genome.wustl.edu	37	2	43802152	43802152	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	43802152	43802152	G	A	SNP	THADA	ENST00000405006	human	ensembl	74_37	-1	known	missense	c.1052	p.T351M	0.997	NULL	pfam_DUF2428_death-receptor-like,superfamily_ARM-type_fold	-	no_errors	THADA	HGNC	ENSG00000115970				30	0	0.00	37	2	5.13
TIE1	0	genome.wustl.edu	37	1	43778258	43778258	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	43778258	43778258	T	G	SNP	TIE1	ENST00000372476	human	ensembl	74_37	+1	known	missense	c.1913	p.L638R	0.466	superfamily_Fibronectin_type3	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_EG-like_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TIE1	HGNC	ENSG00000066056	tier1	-	-	53	0	0.00	45	9	16.67
TMEM56	0	genome.wustl.edu	37	1	95614300	95614300	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	95614300	95614300	C	T	SNP	TMEM56	ENST00000370203	human	ensembl	74_37	+1	novel	silent	c.198	p.G66	0.994	pfam_TLC-dom,smart_TLC-dom,pfscan_TLC-dom	pfam_TLC-dom,smart_TLC-dom,pfscan_TLC-dom	-	no_errors	TMEM56	HGNC	ENSG00000152078	tier1	-	-	68	0	0.00	80	5	5.88
TMPRSS5	0	genome.wustl.edu	37	11	113563829	113563829	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	113563829	113563829	C	T	SNP	TMPRSS5	ENST00000299882	human	ensembl	74_37	-1	known	missense	c.928	p.A310T	0.999	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS5	HGNC	ENSG00000166682				55	0	0.00	49	3	5.77
TOX2	0	genome.wustl.edu	37	20	42602018	42602018	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	20	42602018	42602018	C	T	SNP	TOX2	ENST00000341197	human	ensembl	74_37	+1	known	silent	c.111	p.D37	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TOX2	HGNC	ENSG00000124191				71	0	0.00	64	4	5.88
TP53	0	genome.wustl.edu	37	17	7577539	7577539	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	7577539	7577539	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.742	p.R248W	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs121912651	-	66	0	0.00	45	12	21.05
TPO	0	genome.wustl.edu	37	2	1459924	1459924	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	1459924	1459924	T	G	SNP	TPO	ENST00000329066	human	ensembl	74_37	+1	known	missense	c.689	p.L230R	1.000	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	pfam_Haem_peroxidase_animal,pfam_EGF-like_Ca-bd_dom,superfamily_Haem_peroxidase,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	TPO	HGNC	ENSG00000115705	tier1	-	-	42	0	0.00	15	17	53.12
TPRX1	0	genome.wustl.edu	37	19	48305105	48305105	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	48305105	48305105	C	A	SNP	TPRX1	ENST00000535759	human	ensembl	74_37	-1	known	missense	c.1454	p.G485V	0.006	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	TPRX1	HGNC	ENSG00000178928				64	0	0.00	51	4	7.27
TRDN	0	genome.wustl.edu	37	6	123786032	123786033	+	Frame_Shift_Ins	INS	-	-	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	123786032	123786033	-	A	INS	TRDN	ENST00000546248	human	ensembl	74_37	-1	known	frame_shift_ins	c.890_889	p.S297fs	0.000:0.000	NULL	pfam_Asp-B-hydro/Triadin_dom	-	no_errors	TRDN	HGNC	ENSG00000186439	tier1			34	0	0.00	28	4	12.50
TRIM49C	0	genome.wustl.edu	37	11	89771112	89771112	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	11	89771112	89771112	G	A	SNP	TRIM49C	ENST00000448984	human	ensembl	74_37	+1	known	missense	c.703	p.E235K	0.000	superfamily_Lambda_DNA-bd_dom	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,superfamily_Lambda_DNA-bd_dom,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM49C	HGNC	ENSG00000204449	tier1	-	-	20	0	0.00	6	6	50.00
TRPM7	0	genome.wustl.edu	37	15	50925097	50925097	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	15	50925097	50925097	G	T	SNP	TRPM7	ENST00000313478	human	ensembl	74_37	-1	known	missense	c.1100	p.T367K	1.000	NULL	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM7	HGNC	ENSG00000092439	tier1	-	-	67	0	0.00	76	4	5.00
TSHZ3	0	genome.wustl.edu	37	19	31770238	31770240	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	31770238	31770240	CTG	-	DEL	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	in_frame_del	c.461_459	p.S157in_frame_del	1.000:1.000:1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297	tier1			48	0	0.00	28	3	9.68
TSSK6	0	genome.wustl.edu	37	19	19626190	19626190	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	19626190	19626190	C	T	SNP	TSSK6	ENST00000360913	human	ensembl	74_37	-1	known	missense	c.47	p.R16H	0.643	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TSSK6	HGNC	ENSG00000178093				55	0	0.00	35	2	5.41
TTN	0	genome.wustl.edu	37	2	179393711	179393711	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	179393711	179393711	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.99063	p.V33021	1.000	superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	84	0	0.00	71	4	5.33
TTN	0	genome.wustl.edu	37	2	179437626	179437626	+	Silent	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	179437626	179437626	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.65529	p.A21843	0.550	superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	25	0	0.00	22	4	15.38
TWF1	0	genome.wustl.edu	37	12	44194271	44194271	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	44194271	44194271	G	A	SNP	TWF1	ENST00000325127	human	ensembl	74_37	-1	known	silent	c.447	p.G149	0.996	pfam_Actin-bd_cofilin/tropomyosin,smart_Actin-bd_cofilin/tropomyosin	pfam_Actin-bd_cofilin/tropomyosin,smart_Actin-bd_cofilin/tropomyosin	-	no_errors	TWF1	HGNC	ENSG00000151239	tier1	-	-	45	0	0.00	59	4	6.35
TXNDC16	0	genome.wustl.edu	37	14	52899225	52899225	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	14	52899225	52899225	G	A	SNP	TXNDC16	ENST00000281741	human	ensembl	74_37	-1	known	missense	c.2275	p.R759C	0.000	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC16	HGNC	ENSG00000087301	tier1	-	-	57	0	0.00	35	9	20.00
UGT3A1	0	genome.wustl.edu	37	5	35957435	35957435	+	Silent	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	5	35957435	35957435	C	T	SNP	UGT3A1	ENST00000274278	human	ensembl	74_37	-1	known	silent	c.930	p.Q310	0.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT3A1	HGNC	ENSG00000145626	tier1	-	-	88	0	0.00	69	26	27.37
UHRF2	0	genome.wustl.edu	37	9	6420988	6420988	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	9	6420988	6420988	C	A	SNP	UHRF2	ENST00000276893	human	ensembl	74_37	+1	known	missense	c.230	p.P77H	0.998	NULL	pfam_SRA_YDG,pfam_DUF3590,pfam_Ubiquitin_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Ubiquitin_dom,smart_Znf_PHD,smart_Znf_RING,smart_SRA_YDG,pfscan_SRA_YDG,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_Ubiquitin_supergroup	-	no_errors	UHRF2	HGNC	ENSG00000147854				34	0	0.00	21	2	8.70
UNC13A	0	genome.wustl.edu	37	19	17750317	17750317	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	17750317	17750317	G	A	SNP	UNC13A	ENST00000428389	human	ensembl	74_37	-1	known	silent	c.3138	p.S1046	1.000	NULL	pfam_Munc13_subgr_dom-2,pfam_C2_dom,pfam_Ca-dep_secretion_activator,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13A	HGNC	ENSG00000130477	tier1	-	-	101	0	0.00	76	4	5.00
UNC5C	0	genome.wustl.edu	37	4	96140155	96140155	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	4	96140155	96140155	T	G	SNP	UNC5C	ENST00000453304	human	ensembl	74_37	-1	known	missense	c.1610	p.N537T	1.000	pfam_ZU5,smart_ZU5,pfscan_ZU5	pfam_ZU5,pfam_Death_domain,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5C	HGNC	ENSG00000182168				70	0	0.00	44	3	6.38
USH2A	0	genome.wustl.edu	37	1	215987084	215987084	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	215987084	215987084	G	T	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.9733	p.L3245I	0.013	superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	72	0	0.00	69	4	5.48
USH2A	0	genome.wustl.edu	37	1	216011423	216011423	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	1	216011423	216011423	G	A	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.9281	p.A3094V	1.000	smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781				49	0	0.00	44	3	6.25
USP29	0	genome.wustl.edu	37	19	57640428	57640428	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	57640428	57640428	A	C	SNP	USP29	ENST00000254181	human	ensembl	74_37	+1	known	missense	c.385	p.I129L	0.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP29	HGNC	ENSG00000131864	tier1	-	-	19	0	0.00	16	9	36.00
USP51	0	genome.wustl.edu	37	X	55515146	55515146	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	X	55515146	55515146	C	T	SNP	USP51	ENST00000500968	human	ensembl	74_37	-1	known	missense	c.227	p.S76N	0.949	NULL	pfam_Peptidase_C19/C67,pfam_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP51	HGNC	ENSG00000247746	tier1	-	-	52	0	0.00	37	16	30.19
VIL1	0	genome.wustl.edu	37	2	219290359	219290359	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	2	219290359	219290359	C	A	SNP	VIL1	ENST00000248444	human	ensembl	74_37	+1	known	missense	c.172	p.L58M	0.977	pfam_Gelsolin_dom,smart_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	VIL1	HGNC	ENSG00000127831				34	0	0.00	33	2	5.71
VIPR1	0	genome.wustl.edu	37	3	42569372	42569372	+	RNA	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	42569372	42569372	C	T	SNP	VIPR1	ENST00000473575	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	VIPR1	HGNC	ENSG00000114812	tier1	-	-	37	0	0.00	20	6	23.08
VPRBP	0	genome.wustl.edu	37	3	51452220	51452220	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	3	51452220	51452220	G	A	SNP	VPRBP	ENST00000335891	human	ensembl	74_37	-1	known	missense	c.2348	p.P783L	1.000	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	VPRBP	HGNC	ENSG00000145041				38	0	0.00	17	2	10.53
VPS13B	0	genome.wustl.edu	37	8	100286533	100286533	+	Frame_Shift_Del	DEL	T	T	-			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	8	100286533	100286533	T	-	DEL	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	frame_shift_del	c.2623	p.S875fs	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549	tier1			84	0	0.00	81	15	15.62
VPS13B	0	genome.wustl.edu	37	8	100286534	100286534	+	Nonsense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	8	100286534	100286534	C	A	SNP	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	nonsense	c.2624	p.S875*	1.000	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549	tier1	-	-	86	0	0.00	80	20	20.00
VWF	0	genome.wustl.edu	37	12	6128535	6128535	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	12	6128535	6128535	G	A	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	missense	c.4049	p.A1350V	0.767	pirsf_VWF,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799	tier1	-	-	90	0	0.00	69	15	17.86
WBP1L	0	genome.wustl.edu	37	10	104569775	104569775	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	10	104569775	104569775	G	T	SNP	WBP1L	ENST00000448841	human	ensembl	74_37	+1	known	nonsense	c.319	p.E107*	1.000	pfam_Uncharacterised_WW-bd	pfam_Uncharacterised_WW-bd	-	no_errors	WBP1L	HGNC	ENSG00000166272	tier1	-	-	68	0	0.00	59	4	6.35
WDR13	0	genome.wustl.edu	37	X	48459019	48459019	+	RNA	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	X	48459019	48459019	G	T	SNP	WDR13	ENST00000482760	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	WDR13	HGNC	ENSG00000101940	tier1	-	-	38	0	0.00	32	4	11.11
ZAN	0	genome.wustl.edu	37	7	100377076	100377076	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	100377076	100377076	G	T	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	missense	c.6323	p.S2108I	0.000	NULL	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839	tier1	-	-	58	0	0.00	63	4	5.97
ZFP3	0	genome.wustl.edu	37	17	4995060	4995060	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	17	4995060	4995060	G	T	SNP	ZFP3	ENST00000318833	human	ensembl	74_37	+1	known	missense	c.261	p.E87D	0.013	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP3	HGNC	ENSG00000180787				34	0	0.00	29	2	6.45
ZFPM1	0	genome.wustl.edu	37	16	88594569	88594569	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	16	88594569	88594569	C	T	SNP	ZFPM1	ENST00000319555	human	ensembl	74_37	+1	known	missense	c.635	p.P212L	0.112	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM1	HGNC	ENSG00000179588				84	0	0.00	72	4	5.26
ZFYVE27	0	genome.wustl.edu	37	10	99509277	99509277	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	10	99509277	99509277	C	T	SNP	ZFYVE27	ENST00000356257	human	ensembl	74_37	+1	known	missense	c.598	p.P200S	1.000	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE27	HGNC	ENSG00000155256				49	0	0.00	23	3	11.54
ZNF106	0	genome.wustl.edu	37	15	42730815	42730815	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	15	42730815	42730815	G	T	SNP	ZNF106	ENST00000263805	human	ensembl	74_37	-1	known	missense	c.4526	p.S1509Y	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_Znf_C2H2-like,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ZNF106	HGNC	ENSG00000103994				33	0	0.00	37	2	5.13
ZNF205	0	genome.wustl.edu	37	16	3168964	3168964	+	Silent	SNP	G	G	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	16	3168964	3168964	G	A	SNP	ZNF205	ENST00000219091	human	ensembl	74_37	+1	known	silent	c.543	p.S181	0.000	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF205	HGNC	ENSG00000122386	tier1	-	-	69	0	0.00	43	9	17.31
ZNF292	0	genome.wustl.edu	37	6	87964759	87964759	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	6	87964759	87964759	A	G	SNP	ZNF292	ENST00000369577	human	ensembl	74_37	+1	known	missense	c.1412	p.D471G	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994	tier1	-	-	28	0	0.00	24	10	29.41
ZNF470	0	genome.wustl.edu	37	19	57089485	57089485	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	57089485	57089485	A	T	SNP	ZNF470	ENST00000330619	human	ensembl	74_37	+1	known	missense	c.1688	p.K563M	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF470	HGNC	ENSG00000197016	tier1	-	-	73	0	0.00	66	14	17.50
ZNF493	0	genome.wustl.edu	37	19	21606279	21606279	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	21606279	21606279	C	A	SNP	ZNF493	ENST00000355504	human	ensembl	74_37	+1	known	missense	c.434	p.S145Y	0.028	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF493	HGNC	ENSG00000196268				35	0	0.00	55	3	5.17
ZNF568	0	genome.wustl.edu	37	19	37441138	37441138	+	Silent	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	37441138	37441138	T	G	SNP	ZNF568	ENST00000333987	human	ensembl	74_37	+1	known	silent	c.1083	p.P361	0.003	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF568	HGNC	ENSG00000198453	tier1	-	-	69	0	0.00	68	16	19.05
ZNF626	0	genome.wustl.edu	37	19	20808302	20808302	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	20808302	20808302	T	G	SNP	ZNF626	ENST00000601440	human	ensembl	74_37	-1	known	missense	c.381	p.K127N	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF626	HGNC	ENSG00000188171	tier1	-	-	145	0	0.00	102	17	14.29
ZNF804B	0	genome.wustl.edu	37	7	88964744	88964744	+	Missense_Mutation	SNP	A	A	C			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	7	88964744	88964744	A	C	SNP	ZNF804B	ENST00000333190	human	ensembl	74_37	+1	known	missense	c.2448	p.Q816H	0.000	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804B	HGNC	ENSG00000182348	tier1	-	-	30	0	0.00	13	9	40.91
ZSCAN18	0	genome.wustl.edu	37	19	58601387	58601387	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93D-01A-11D-A387-09	TCGA-JY-A93D-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	47f5b536-9d6f-4d88-a50c-c21574548e75	da2df177-c57c-4de1-882c-07f7a1b1c4db	19	58601387	58601387	C	T	SNP	ZSCAN18	ENST00000600404	human	ensembl	74_37	-1	known	missense	c.416	p.R139H	0.245	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN18	HGNC	ENSG00000121413	tier1	-	-	90	0	0.00	59	17	22.37
