Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ACCS	0	genome.wustl.edu	37	11	44089274	44089274	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	44089274	44089274	G	A	SNP	ACCS	ENST00000263776	human	ensembl	74_37	+1	known	missense	c.97	p.E33K	0.004	NULL	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	-	no_errors	ACCS	HGNC	ENSG00000110455	tier1	-	-	58	0	0.00	43	17	27.87
ADNP2	0	genome.wustl.edu	37	18	77895502	77895502	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	18	77895502	77895502	G	C	SNP	ADNP2	ENST00000262198	human	ensembl	74_37	+1	known	missense	c.2206	p.A736P	0.998	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ADNP2	HGNC	ENSG00000101544	tier1	-	-	42	0	0.00	36	11	22.45
AKAP10	0	genome.wustl.edu	37	17	19861383	19861383	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	17	19861383	19861383	G	T	SNP	AKAP10	ENST00000225737	human	ensembl	74_37	-1	known	missense	c.821	p.A274D	1.000	superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	AKAP10	HGNC	ENSG00000108599	tier1	-	-	75	0	0.00	71	5	6.58
ALDH1B1	0	genome.wustl.edu	37	9	38396960	38396960	+	Silent	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	9	38396960	38396960	C	T	SNP	ALDH1B1	ENST00000377698	human	ensembl	74_37	+1	known	silent	c.1215	p.G405	0.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1B1	HGNC	ENSG00000137124				48	0	0.00	55	3	5.17
ALPK2	0	genome.wustl.edu	37	18	56202661	56202661	+	Silent	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	18	56202661	56202661	C	T	SNP	ALPK2	ENST00000361673	human	ensembl	74_37	-1	known	silent	c.4758	p.Q1586	0.004	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK2	HGNC	ENSG00000198796				24	0	0.00	34	2	5.56
APC2	0	genome.wustl.edu	37	19	1457140	1457140	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	1457140	1457140	C	G	SNP	APC2	ENST00000233607	human	ensembl	74_37	+1	known	missense	c.1105	p.R369G	1.000	superfamily_ARM-type_fold	pfam_APC_basic_dom,pfam_APC_dom,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_SAMP,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Armadillo	-	no_errors	APC2	HGNC	ENSG00000115266	tier1	-	-	17	0	0.00	5	4	44.44
APOL3	0	genome.wustl.edu	37	22	36537664	36537664	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	22	36537664	36537664	C	T	SNP	APOL3	ENST00000349314	human	ensembl	74_37	-1	known	missense	c.793	p.V265I	0.000	pfam_ApoL	pfam_ApoL	-	no_errors	APOL3	HGNC	ENSG00000128284	tier1	-	-	23	0	0.00	26	4	13.33
AR	0	genome.wustl.edu	37	X	66765195	66765195	+	Silent	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	X	66765195	66765195	G	A	SNP	AR	ENST00000374690	human	ensembl	74_37	+1	known	silent	c.207	p.Q69	0.995	pfam_Andrgn_rcpt	pfam_Andrgn_rcpt,pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Andrgn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	AR	HGNC	ENSG00000169083				50	0	0.00	51	4	7.27
ARHGEF17	0	genome.wustl.edu	37	11	73021802	73021802	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	73021802	73021802	C	T	SNP	ARHGEF17	ENST00000263674	human	ensembl	74_37	+1	known	missense	c.2119	p.R707C	1.000	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,superfamily_Vinculin/catenin,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF17	HGNC	ENSG00000110237	tier1	-	-	43	0	0.00	29	27	48.21
ARHGEF39	0	genome.wustl.edu	37	9	35662990	35662990	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	9	35662990	35662990	C	T	SNP	ARHGEF39	ENST00000378387	human	ensembl	74_37	-1	known	missense	c.626	p.R209H	0.423	superfamily_DH-domain	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF39	HGNC	ENSG00000137135	tier1	rs147148814	-	44	0	0.00	37	4	9.76
ARID1A	0	genome.wustl.edu	37	1	27097621	27097622	+	Frame_Shift_Ins	INS	-	-	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	27097621	27097622	-	A	INS	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	frame_shift_ins	c.3210_3211	p.W1072fs	1.000:1.000	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713	tier1			54	0	0.00	44	17	27.87
ARSB	0	genome.wustl.edu	37	5	78135223	78135223	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	78135223	78135223	T	A	SNP	ARSB	ENST00000264914	human	ensembl	74_37	-1	known	missense	c.1169	p.E390V	1.000	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSB	HGNC	ENSG00000113273	tier1	-	-	36	0	0.00	34	15	30.61
ASH1L	0	genome.wustl.edu	37	1	155450046	155450046	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	155450046	155450046	A	T	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	missense	c.2615	p.I872N	1.000	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539				29	0	0.00	41	3	6.82
ATHL1	0	genome.wustl.edu	37	11	293646	293646	+	Silent	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	293646	293646	C	T	SNP	ATHL1	ENST00000409548	human	ensembl	74_37	+1	known	silent	c.1533	p.F511	0.994	pfam_Glyco_hydro_65_M,superfamily_6-hairpin_glycosidase-like	pfam_Glyco_hydro_65_M,superfamily_6-hairpin_glycosidase-like	-	no_errors	ATHL1	HGNC	ENSG00000142102	tier1	-	-	26	0	0.00	20	11	35.48
BAI1	0	genome.wustl.edu	37	8	143623556	143623556	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	143623556	143623556	G	A	SNP	BAI1	ENST00000323289	human	ensembl	74_37	+1	known	missense	c.3961	p.G1321S	0.991	NULL	pfam_GPCR_2_secretin-like,pfam_Thrombospondin_1_rpt,pfam_DUF3497,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	BAI1	HGNC	ENSG00000181790	tier1	-	-	72	0	0.00	91	37	28.91
BASP1	0	genome.wustl.edu	37	5	17275448	17275448	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	17275448	17275448	G	T	SNP	BASP1	ENST00000322611	human	ensembl	74_37	+1	known	missense	c.123	p.E41D	0.978	pfam_BASP1	pfam_BASP1	-	no_errors	BASP1	HGNC	ENSG00000176788	tier1	-	-	23	0	0.00	13	10	41.67
BCAM	0	genome.wustl.edu	37	19	45322020	45322020	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	45322020	45322020	G	A	SNP	BCAM	ENST00000270233	human	ensembl	74_37	+1	known	missense	c.1217	p.G406D	0.645	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	BCAM	HGNC	ENSG00000187244	tier1	-	-	35	0	0.00	45	4	8.00
BCAP31	0	genome.wustl.edu	37	X	152967491	152967491	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	X	152967491	152967491	G	A	SNP	BCAP31	ENST00000458587	human	ensembl	74_37	-1	known	missense	c.874	p.R292C	1.000	NULL	pfam_Bap31	-	no_errors	BCAP31	HGNC	ENSG00000185825	tier1	-	-	76	0	0.00	71	40	36.04
BCL7A	0	genome.wustl.edu	37	12	122468610	122468610	+	Nonsense_Mutation	SNP	A	A	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	12	122468610	122468610	A	T	SNP	BCL7A	ENST00000538010	human	ensembl	74_37	+1	known	nonsense	c.97	p.K33*	1.000	pfam_BCL7	pfam_BCL7	-	no_errors	BCL7A	HGNC	ENSG00000110987				41	0	0.00	43	4	8.51
BLK	0	genome.wustl.edu	37	8	11414253	11414253	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	11414253	11414253	G	A	SNP	BLK	ENST00000259089	human	ensembl	74_37	+1	known	missense	c.859	p.V287M	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	BLK	HGNC	ENSG00000136573				50	0	0.00	62	4	6.06
BLNK	0	genome.wustl.edu	37	10	97960771	97960771	+	Silent	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	10	97960771	97960771	G	T	SNP	BLNK	ENST00000224337	human	ensembl	74_37	-1	known	silent	c.978	p.P326	0.005	NULL	pfam_SH2,smart_SH2,pfscan_SH2	-	no_errors	BLNK	HGNC	ENSG00000095585	tier1	-	-	30	0	0.00	26	10	27.78
C17orf58	0	genome.wustl.edu	37	17	65989137	65989137	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	17	65989137	65989137	G	C	SNP	C17orf58	ENST00000334461	human	ensembl	74_37	-1	known	missense	c.126	p.D42E	0.000	NULL	NULL	-	no_errors	C17orf58	HGNC	ENSG00000186665	tier1	-	-	44	0	0.00	32	14	30.43
C1orf87	0	genome.wustl.edu	37	1	60506762	60506762	+	Silent	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	60506762	60506762	G	T	SNP	C1orf87	ENST00000371201	human	ensembl	74_37	-1	known	silent	c.384	p.T128	0.527	NULL	NULL	-	no_errors	C1orf87	HGNC	ENSG00000162598				32	0	0.00	34	2	5.56
C2CD4C	0	genome.wustl.edu	37	19	407400	407400	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	407400	407400	C	T	SNP	C2CD4C	ENST00000332235	human	ensembl	74_37	-1	known	missense	c.962	p.R321H	1.000	superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	C2CD4C	HGNC	ENSG00000183186	tier1	-	-	16	0	0.00	7	4	36.36
C3orf17	0	genome.wustl.edu	37	3	112729516	112729516	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	3	112729516	112729516	T	C	SNP	C3orf17	ENST00000314400	human	ensembl	74_37	-1	known	missense	c.949	p.N317D	0.996	NULL	NULL	-	no_errors	C3orf17	HGNC	ENSG00000163608				33	0	0.00	45	4	8.16
C6	0	genome.wustl.edu	37	5	41154084	41154084	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	41154084	41154084	C	G	SNP	C6	ENST00000263413	human	ensembl	74_37	-1	known	missense	c.2118	p.K706N	0.998	superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_MACPF,pfam_Sushi_SCR_CCP,pfam_Thrombospondin_1_rpt,pfam_LDrepeatLR_classA_rpt,pfam_Kazal_dom,superfamily_Sushi_SCR_CCP,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,smart_Sushi_SCR_CCP,smart_FacI_MAC,prints_MAC_perforin,pfscan_LDrepeatLR_classA_rpt,pfscan_Sushi_SCR_CCP,pfscan_Thrombospondin_1_rpt	-	no_errors	C6	HGNC	ENSG00000039537				44	0	0.00	30	2	6.25
C9orf9	0	genome.wustl.edu	37	9	135763819	135763819	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	9	135763819	135763819	C	T	SNP	C9orf9	ENST00000356311	human	ensembl	74_37	+1	known	nonsense	c.490	p.Q164*	0.797	NULL	NULL	-	no_errors	C9orf9	HGNC	ENSG00000165698	tier1	-	-	63	0	0.00	61	22	26.51
CACNA2D3	0	genome.wustl.edu	37	3	55108159	55108159	+	Frame_Shift_Del	DEL	G	G	-			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	3	55108159	55108159	G	-	DEL	CACNA2D3	ENST00000288197	human	ensembl	74_37	+1	known	frame_shift_del	c.3202	p.G1069fs	1.000	NULL	pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D3	HGNC	ENSG00000157445	tier1			32	0	0.00	37	2	5.13
CAPG	0	genome.wustl.edu	37	2	85625215	85625215	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	85625215	85625215	G	T	SNP	CAPG	ENST00000263867	human	ensembl	74_37	-1	known	missense	c.820	p.L274I	0.001	pfam_Gelsolin_dom,smart_Villin/Gelsolin	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	CAPG	HGNC	ENSG00000042493	tier1	-	-	52	0	0.00	59	4	6.35
CBLN2	0	genome.wustl.edu	37	18	70205937	70205937	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	18	70205937	70205937	T	A	SNP	CBLN2	ENST00000269503	human	ensembl	74_37	-1	known	missense	c.428	p.Y143F	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CBLN2	HGNC	ENSG00000141668				43	0	0.00	21	2	8.70
CCDC41	0	genome.wustl.edu	37	12	94729531	94729531	+	RNA	SNP	T	T	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	12	94729531	94729531	T	A	SNP	CCDC41	ENST00000546587	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CCDC41	HGNC	ENSG00000173588	tier1	-	-	22	0	0.00	18	7	28.00
CCDC88A	0	genome.wustl.edu	37	2	55529121	55529121	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	55529121	55529121	G	A	SNP	CCDC88A	ENST00000436346	human	ensembl	74_37	-1	known	missense	c.4559	p.T1520M	1.000	NULL	pfam_Hook-related_fam,superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CCDC88A	HGNC	ENSG00000115355	tier1	rs200839306	-	44	0	0.00	39	4	9.30
CDKL1	0	genome.wustl.edu	37	14	50808938	50808938	+	Silent	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	14	50808938	50808938	G	A	SNP	CDKL1	ENST00000395834	human	ensembl	74_37	-1	known	silent	c.369	p.C123	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDKL1	HGNC	ENSG00000100490				36	0	0.00	62	4	6.06
CFTR	0	genome.wustl.edu	37	7	117251832	117251832	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	117251832	117251832	G	T	SNP	CFTR	ENST00000003084	human	ensembl	74_37	+1	known	missense	c.3337	p.A1113S	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM,tigrfam_cAMP_cl_channel	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM,tigrfam_cAMP_cl_channel	-	no_errors	CFTR	HGNC	ENSG00000001626	tier1	-	-	69	0	0.00	74	4	5.13
CGN	0	genome.wustl.edu	37	1	151509295	151509295	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	151509295	151509295	G	T	SNP	CGN	ENST00000271636	human	ensembl	74_37	+1	known	missense	c.3396	p.Q1132H	0.999	pfam_Myosin_tail	pfam_Myosin_tail	-	no_errors	CGN	HGNC	ENSG00000143375	tier1	-	-	35	0	0.00	45	4	8.16
CHST7	0	genome.wustl.edu	37	X	46434207	46434207	+	Silent	SNP	A	A	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	X	46434207	46434207	A	C	SNP	CHST7	ENST00000276055	human	ensembl	74_37	+1	known	silent	c.841	p.R281	0.399	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST7	HGNC	ENSG00000147119	tier1	-	-	15	0	0.00	21	6	22.22
CIITA	0	genome.wustl.edu	37	16	11001372	11001372	+	Silent	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	16	11001372	11001372	C	T	SNP	CIITA	ENST00000324288	human	ensembl	74_37	+1	known	silent	c.2023	p.L675	0.574	pfscan_NACHT_NTPase,prints_MHC_II_transact	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,prints_MHC_II_transact	-	no_errors	CIITA	HGNC	ENSG00000179583	tier1	-	-	16	0	0.00	8	11	57.89
CIITA	0	genome.wustl.edu	37	16	11002890	11002890	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	16	11002890	11002890	G	A	SNP	CIITA	ENST00000324288	human	ensembl	74_37	+1	known	missense	c.2662	p.A888T	0.004	NULL	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,prints_MHC_II_transact	-	no_errors	CIITA	HGNC	ENSG00000179583	tier1	-	-	35	0	0.00	48	4	7.69
CIRBP-AS1	0	genome.wustl.edu	37	19	1270231	1270232	+	RNA	INS	-	-	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	1270231	1270232	-	C	INS	CIRBP-AS1	ENST00000585832	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.002	-	-	-	no_errors	CIRBP-AS1	HGNC	ENSG00000267493	tier1			13	0	0.00	25	3	10.71
CIRBP-AS1	0	genome.wustl.edu	37	19	1270232	1270232	+	RNA	DEL	C	C	-			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	1270232	1270232	C	-	DEL	CIRBP-AS1	ENST00000585832	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	CIRBP-AS1	HGNC	ENSG00000267493	tier1			13	0	0.00	25	3	10.71
CLCN2	0	genome.wustl.edu	37	3	184069853	184069853	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	3	184069853	184069853	C	T	SNP	CLCN2	ENST00000265593	human	ensembl	74_37	-1	known	missense	c.2363	p.C788Y	1.000	NULL	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated,prints_Cl-channel-2	-	no_errors	CLCN2	HGNC	ENSG00000114859	tier1	-	-	27	0	0.00	48	4	7.69
COL22A1	0	genome.wustl.edu	37	8	139601151	139601151	+	RNA	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	139601151	139601151	G	A	SNP	COL22A1	ENST00000341807	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	COL22A1	HGNC	ENSG00000169436	tier1	-	-	23	0	0.00	29	12	29.27
COL2A1	0	genome.wustl.edu	37	12	48367925	48367925	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	12	48367925	48367925	G	A	SNP	COL2A1	ENST00000380518	human	ensembl	74_37	-1	known	missense	c.4264	p.R1422W	1.000	pfam_Fib_collagen_C,smart_Fib_collagen_C	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL2A1	HGNC	ENSG00000139219				34	0	0.00	37	2	5.13
COPB1	0	genome.wustl.edu	37	11	14498481	14498481	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	14498481	14498481	C	T	SNP	COPB1	ENST00000249923	human	ensembl	74_37	-1	known	missense	c.1439	p.R480H	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_COPB1	pfam_Coatomer_bsu_C,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_COPB1	-	no_errors	COPB1	HGNC	ENSG00000129083	tier1	-	-	27	0	0.00	35	4	10.26
CPA2	0	genome.wustl.edu	37	7	129906763	129906763	+	Silent	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	129906763	129906763	G	A	SNP	CPA2	ENST00000222481	human	ensembl	74_37	+1	known	silent	c.42	p.G14	0.786	NULL	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA2	HGNC	ENSG00000158516	tier1	-	-	62	0	0.00	72	4	5.26
CRTC3	0	genome.wustl.edu	37	15	91181743	91181743	+	Silent	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	15	91181743	91181743	G	A	SNP	CRTC3	ENST00000268184	human	ensembl	74_37	+1	known	silent	c.1332	p.P444	0.007	NULL	NULL	-	no_errors	CRTC3	HGNC	ENSG00000140577				20	0	0.00	38	4	9.52
CYTH1	0	genome.wustl.edu	37	17	76672223	76672223	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	17	76672223	76672223	C	T	SNP	CYTH1	ENST00000361101	human	ensembl	74_37	-1	known	missense	c.1147	p.E383K	1.000	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom	-	no_errors	CYTH1	HGNC	ENSG00000108669	tier1	-	-	24	0	0.00	27	13	32.50
DCHS1	0	genome.wustl.edu	37	11	6645094	6645094	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	6645094	6645094	C	T	SNP	DCHS1	ENST00000299441	human	ensembl	74_37	-1	known	missense	c.7813	p.A2605T	0.323	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS1	HGNC	ENSG00000166341	tier1	-	-	42	0	0.00	38	4	9.52
DDX54	0	genome.wustl.edu	37	12	113603800	113603800	+	Silent	SNP	T	T	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	12	113603800	113603800	T	C	SNP	DDX54	ENST00000314045	human	ensembl	74_37	-1	known	silent	c.1452	p.P484	0.243	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DBP10CT,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX54	HGNC	ENSG00000123064	tier1	-	-	76	0	0.00	80	5	5.88
DFFB	0	genome.wustl.edu	37	1	3782553	3782553	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	3782553	3782553	C	T	SNP	DFFB	ENST00000378209	human	ensembl	74_37	+1	known	missense	c.419	p.P140L	0.014	pfam_Apoptosis_DFF40	pfam_Apoptosis_DFF40,pfam_CIDE-N_dom,smart_CIDE-N_dom,pfscan_CIDE-N_dom	-	no_errors	DFFB	HGNC	ENSG00000169598	tier1	-	-	133	0	0.00	84	46	35.38
DHX8	0	genome.wustl.edu	37	17	41571170	41571170	+	Silent	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	17	41571170	41571170	C	T	SNP	DHX8	ENST00000262415	human	ensembl	74_37	+1	known	silent	c.1128	p.V376	1.000	NULL	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX8	HGNC	ENSG00000067596	tier1	-	-	51	0	0.00	48	25	34.25
DNAH5	0	genome.wustl.edu	37	5	13692122	13692122	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	13692122	13692122	C	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.13846	p.G4616R	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	39	0	0.00	37	18	32.73
DNAH5	0	genome.wustl.edu	37	5	13793738	13793738	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	13793738	13793738	C	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.8110	p.A2704T	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	46	0	0.00	86	5	5.49
DRC1	0	genome.wustl.edu	37	2	26672862	26672862	+	Splice_Site	SNP	A	A	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	26672862	26672862	A	T	SNP	DRC1	ENST00000288710	human	ensembl	74_37	+1	known	splice_site	c.1510-2	e12-2	1.000	-	-	-	no_errors	DRC1	HGNC	ENSG00000157856	tier1	-	-	46	0	0.00	30	22	42.31
DST	0	genome.wustl.edu	37	6	56417955	56417955	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	6	56417955	56417955	T	A	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.15542	p.Q5181L	1.000	superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	54	0	0.00	53	4	6.90
DTNBP1	0	genome.wustl.edu	37	6	15533520	15533520	+	Silent	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	6	15533520	15533520	G	A	SNP	DTNBP1	ENST00000355917	human	ensembl	74_37	-1	known	silent	c.621	p.D207	1.000	pfam_Dysbindin	pfam_Dysbindin,superfamily_Trp_syn_b_sub_like_PLP_eny_SF	-	no_errors	DTNBP1	HGNC	ENSG00000047579	tier1	-	-	48	0	0.00	47	22	31.88
DYNLT3	0	genome.wustl.edu	37	X	37700359	37700359	+	Splice_Site	SNP	C	C	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	X	37700359	37700359	C	A	SNP	DYNLT3	ENST00000378581	human	ensembl	74_37	-1	known	splice_site	c.197-1	e4-1	1.000	-	-	-	no_errors	DYNLT3	HGNC	ENSG00000165169	tier1	-	-	59	0	0.00	58	4	6.45
ECI1	0	genome.wustl.edu	37	16	2293218	2293218	+	Missense_Mutation	SNP	C	C	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	16	2293218	2293218	C	G	SNP	ECI1	ENST00000301729	human	ensembl	74_37	-1	known	missense	c.571	p.D191H	1.000	pfam_Crotonase_core_superfam	pfam_Crotonase_core_superfam	-	no_errors	ECI1	HGNC	ENSG00000167969	tier1	-	-	71	0	0.00	56	33	37.08
EEF2K	0	genome.wustl.edu	37	16	22295238	22295238	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	16	22295238	22295238	C	T	SNP	EEF2K	ENST00000263026	human	ensembl	74_37	+1	known	missense	c.2099	p.A700V	1.000	pirsf_Elongation_factor_2_kinase	pfam_MHCK_EF2_kinase,pfam_Sel1-like,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pirsf_Elongation_factor_2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	EEF2K	HGNC	ENSG00000103319	tier1	-	-	57	0	0.00	89	5	5.32
EIF5B	0	genome.wustl.edu	37	2	99977973	99977973	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	99977973	99977973	T	A	SNP	EIF5B	ENST00000289371	human	ensembl	74_37	+1	known	missense	c.609	p.N203K	1.000	NULL	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_B-barrel,superfamily_TIF_IF2_dom3,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EIF5B	HGNC	ENSG00000158417				38	0	0.00	44	4	8.33
ELOVL6	0	genome.wustl.edu	37	4	110972735	110972735	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	4	110972735	110972735	G	T	SNP	ELOVL6	ENST00000394607	human	ensembl	74_37	-1	known	missense	c.557	p.A186E	0.956	pfam_GNS1_SUR4	pfam_GNS1_SUR4	-	no_errors	ELOVL6	HGNC	ENSG00000170522	tier1	-	-	50	0	0.00	32	20	38.46
ELP6	0	genome.wustl.edu	37	3	47545863	47545863	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	3	47545863	47545863	C	T	SNP	ELP6	ENST00000296149	human	ensembl	74_37	-1	known	missense	c.280	p.V94I	0.985	pfam_UPF0405	pfam_UPF0405	-	no_errors	ELP6	HGNC	ENSG00000163832	tier1	-	-	37	0	0.00	31	18	36.73
ENSG00000161103	0	genome.wustl.edu	37	22	18844883	18844883	+	RNA	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	22	18844883	18844883	C	T	SNP	ENSG00000161103	ENST00000412938	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	AC008132.13	Clone_based_vega_gene	ENSG00000161103	tier1	-	-	348	0	0.00	348	37	9.61
ENSG00000177553	0	genome.wustl.edu	37	1	11837351	11837351	+	RNA	SNP	G	G	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	11837351	11837351	G	C	SNP	ENSG00000177553	ENST00000376620	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-56N19.5	Clone_based_vega_gene	ENSG00000177553	tier1	-	-	52	0	0.00	62	4	6.06
ENSG00000185710	0	genome.wustl.edu	37	16	21916099	21916099	+	RNA	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	16	21916099	21916099	G	A	SNP	ENSG00000185710	ENST00000517529	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.232	-	-	-	no_errors	RP11-645C24.2	Clone_based_vega_gene	ENSG00000185710	tier1	-	-	64	0	0.00	37	24	39.34
ENSG00000205611	0	genome.wustl.edu	37	20	29516303	29516303	+	RNA	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	20	29516303	29516303	G	A	SNP	ENSG00000205611	ENST00000380888	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP4-610C12.4	Clone_based_vega_gene	ENSG00000205611	tier1	-	-	12	0	0.00	10	6	37.50
ENSG00000214733	0	genome.wustl.edu	37	8	144872406	144872406	+	RNA	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	144872406	144872406	G	A	SNP	ENSG00000214733	ENST00000527139	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-429J17.8	Clone_based_vega_gene	ENSG00000214733	tier1	-	-	40	0	0.00	70	21	23.08
ENSG00000221418	0	genome.wustl.edu	37	7	125680343	125680343	+	RNA	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	125680343	125680343	G	T	SNP	ENSG00000221418	ENST00000408491	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.063	-	-	-	no_errors	AC003968.1	Clone_based_ensembl_gene	ENSG00000221418	tier1	-	-	47	0	0.00	57	24	29.63
ENSG00000223759	0	genome.wustl.edu	37	1	149673265	149673265	+	RNA	SNP	C	C	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	149673265	149673265	C	G	SNP	ENSG00000223759	ENST00000443602	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-353N4.4	Clone_based_vega_gene	ENSG00000223759	tier1	-	-	11	0	0.00	11	5	31.25
ENSG00000234277	0	genome.wustl.edu	37	1	227618722	227618722	+	RNA	DEL	A	A	-			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	227618722	227618722	A	-	DEL	ENSG00000234277	ENST00000445817	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.163	-	-	-	no_errors	CTD-2090I13.1	Clone_based_vega_gene	ENSG00000234277	tier1			14	0	0.00	9	3	25.00
ENSG00000237357	0	genome.wustl.edu	37	9	44401879	44401879	+	RNA	SNP	A	A	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	9	44401879	44401879	A	C	SNP	ENSG00000237357	ENST00000428895	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	RP11-475I24.3	Clone_based_vega_gene	ENSG00000237357	tier1	-	-	98	0	0.00	74	16	17.78
ENSG00000244306	0	genome.wustl.edu	37	14	19856372	19856372	+	RNA	SNP	A	A	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	14	19856372	19856372	A	G	SNP	ENSG00000244306	ENST00000551334	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306				23	0	0.00	35	4	10.26
ENSG00000257743	0	genome.wustl.edu	37	7	141831824	141831824	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	141831824	141831824	G	A	SNP	ENSG00000257743	ENST00000477922	human	ensembl	74_37	+1	putative	missense	c.514	p.V172M	0.000	superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,superfamily_P_trefoil,smart_P_trefoil	-	no_errors	RP11-1220K2.2	Clone_based_vega_gene	ENSG00000257743	tier1	-	-	55	0	0.00	48	23	32.39
ENSG00000259721	0	genome.wustl.edu	37	15	33010353	33010353	+	RNA	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	15	33010353	33010353	G	A	SNP	ENSG00000259721	ENST00000558441	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-758N13.1	Clone_based_vega_gene	ENSG00000259721	tier1	-	-	15	0	0.00	14	5	26.32
ENSG00000272918	0	genome.wustl.edu	37	7	104745797	104745797	+	RNA	SNP	A	A	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	104745797	104745797	A	G	SNP	ENSG00000272918	ENST00000607968	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTB-152G17.6	Clone_based_vega_gene	ENSG00000272918	tier1	-	-	30	0	0.00	18	9	33.33
ERBB2IP	0	genome.wustl.edu	37	5	65338949	65338949	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	65338949	65338949	G	A	SNP	ERBB2IP	ENST00000284037	human	ensembl	74_37	+1	known	missense	c.1351	p.E451K	1.000	NULL	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	ERBB2IP	HGNC	ENSG00000112851	tier1	-	-	61	0	0.00	57	29	33.72
ERN2	0	genome.wustl.edu	37	16	23712332	23712332	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	16	23712332	23712332	G	A	SNP	ERN2	ENST00000256797	human	ensembl	74_37	-1	known	missense	c.1451	p.A484V	0.585	NULL	pfam_KEN_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like_supfam,smart_PQQ_beta_propeller_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PUG-dom,pfscan_Prot_kinase_dom	-	no_errors	ERN2	HGNC	ENSG00000134398	tier1	-	-	46	0	0.00	49	4	7.55
FAM138D	0	genome.wustl.edu	37	12	148811	148811	+	RNA	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	12	148811	148811	G	T	SNP	FAM138D	ENST00000320165	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.177	-	-	-	no_errors	FAM138D	HGNC	ENSG00000206114				38	0	0.00	65	5	7.14
FAM13B	0	genome.wustl.edu	37	5	137289026	137289026	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	137289026	137289026	T	A	SNP	FAM13B	ENST00000033079	human	ensembl	74_37	-1	known	missense	c.1781	p.K594M	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	FAM13B	HGNC	ENSG00000031003	tier1	-	-	55	0	0.00	61	4	6.15
FANK1	0	genome.wustl.edu	37	10	127677338	127677338	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	10	127677338	127677338	C	T	SNP	FANK1	ENST00000449042	human	ensembl	74_37	+1	known	missense	c.392	p.T131I	0.000	NULL	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FANK1	HGNC	ENSG00000203780	tier1	-	-	17	0	0.00	8	6	42.86
FAXC	0	genome.wustl.edu	37	6	99729215	99729215	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	6	99729215	99729215	C	T	SNP	FAXC	ENST00000389677	human	ensembl	74_37	-1	known	missense	c.1055	p.S352N	1.000	NULL	superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like	-	no_errors	FAXC	HGNC	ENSG00000146267				15	0	0.00	32	3	8.57
FGA	0	genome.wustl.edu	37	4	155505987	155505988	+	Splice_Site	INS	-	-	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	4	155505987	155505988	-	A	INS	FGA	ENST00000302053	human	ensembl	74_37	-1	known	splice_site_ins	c.1892-3_1892-2	e6-2	1.000:1.000	-	-	-	no_errors	FGA	HGNC	ENSG00000171560	tier1			37	0	0.00	30	2	6.25
FHOD3	0	genome.wustl.edu	37	18	34261459	34261460	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	18	34261459	34261460	AG	-	DEL	FHOD3	ENST00000257209	human	ensembl	74_37	+1	known	frame_shift_del	c.1371_1372	p.R461fs	0.879:1.000	NULL	pfam_FH2_Formin,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FHOD3	HGNC	ENSG00000134775	tier1			49	0	0.00	50	6	10.71
FMO1	0	genome.wustl.edu	37	1	171247904	171247904	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	171247904	171247904	G	T	SNP	FMO1	ENST00000354841	human	ensembl	74_37	+1	known	missense	c.521	p.R174L	0.963	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase,prints_Flavin_mOase_1,prints_Flavin_mOase_2	-	no_errors	FMO1	HGNC	ENSG00000010932				43	0	0.00	36	2	5.26
FREM2	0	genome.wustl.edu	37	13	39358714	39358714	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	13	39358714	39358714	C	T	SNP	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	missense	c.5788	p.P1930S	1.000	pfam_Calx_beta,smart_Calx_beta	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893				18	0	0.00	38	5	11.63
FSD1	0	genome.wustl.edu	37	19	4323073	4323073	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	4323073	4323073	G	T	SNP	FSD1	ENST00000221856	human	ensembl	74_37	+1	known	missense	c.1130	p.S377I	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	FSD1	HGNC	ENSG00000105255	tier1	-	-	56	0	0.00	42	15	26.32
GAB3	0	genome.wustl.edu	37	X	153925438	153925438	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	X	153925438	153925438	C	T	SNP	GAB3	ENST00000424127	human	ensembl	74_37	-1	known	missense	c.1396	p.A466T	0.003	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	GAB3	HGNC	ENSG00000160219	tier1	-	-	47	0	0.00	40	4	9.09
GABRB1	0	genome.wustl.edu	37	4	47408862	47408862	+	Silent	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	4	47408862	47408862	G	T	SNP	GABRB1	ENST00000295454	human	ensembl	74_37	+1	known	silent	c.999	p.G333	0.750	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABBAg_rcpt,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAb_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRB1	HGNC	ENSG00000163288	tier1	-	-	36	0	0.00	47	4	7.69
GALNTL5	0	genome.wustl.edu	37	7	151716773	151716773	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	151716773	151716773	T	C	SNP	GALNTL5	ENST00000392800	human	ensembl	74_37	+1	known	missense	c.1219	p.Y407H	0.883	NULL	pfam_Glyco_trans_2	-	no_errors	GALNTL5	HGNC	ENSG00000106648	tier1	-	-	40	0	0.00	51	8	13.56
GCC2	0	genome.wustl.edu	37	2	109087535	109087535	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	109087535	109087535	G	T	SNP	GCC2	ENST00000309863	human	ensembl	74_37	+1	known	nonsense	c.1750	p.E584*	1.000	NULL	pfam_GRIP,superfamily_GRIP,superfamily_tRNA-bd_arm,smart_GRIP,pfscan_GRIP	-	no_errors	GCC2	HGNC	ENSG00000135968				35	0	0.00	33	2	5.71
GDI2	0	genome.wustl.edu	37	10	5808472	5808472	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	10	5808472	5808472	T	C	SNP	GDI2	ENST00000380132	human	ensembl	74_37	-1	known	missense	c.1133	p.E378G	1.000	pfam_GDP_dissociation_inhibitor	pfam_GDP_dissociation_inhibitor,prints_RabGDI,prints_GDP_dissociation_inhibitor	-	no_errors	GDI2	HGNC	ENSG00000057608	tier1	-	-	51	0	0.00	52	4	7.14
GEMIN7	0	genome.wustl.edu	37	19	45593410	45593410	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	45593410	45593410	G	A	SNP	GEMIN7	ENST00000270257	human	ensembl	74_37	+1	known	missense	c.38	p.R13Q	1.000	NULL	pfam_SMN_gemin7	-	no_errors	GEMIN7	HGNC	ENSG00000142252	tier1	-	-	85	0	0.00	48	36	42.86
GLRB	0	genome.wustl.edu	37	4	158073901	158073901	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	4	158073901	158073901	G	T	SNP	GLRB	ENST00000264428	human	ensembl	74_37	+1	known	missense	c.936	p.E312D	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Glycine_rcpt_B,prints_GABAA_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GLRB	HGNC	ENSG00000109738	tier1	-	-	58	0	0.00	64	4	5.88
GOLGA3	0	genome.wustl.edu	37	12	133351713	133351713	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	12	133351713	133351713	G	A	SNP	GOLGA3	ENST00000456883	human	ensembl	74_37	-1	known	missense	c.4157	p.A1386V	0.000	NULL	superfamily_Prefoldin	-	no_errors	GOLGA3	HGNC	ENSG00000090615	tier1	-	-	17	0	0.00	12	6	33.33
GPR132	0	genome.wustl.edu	37	14	105518385	105518385	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	14	105518385	105518385	G	T	SNP	GPR132	ENST00000329797	human	ensembl	74_37	-1	known	missense	c.89	p.A30D	0.000	NULL	pfam_GPCR_Rhodpsn,prints_G2A_lysphc_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR132	HGNC	ENSG00000183484				50	0	0.00	65	4	5.80
GPR26	0	genome.wustl.edu	37	10	125426291	125426291	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	10	125426291	125426291	C	T	SNP	GPR26	ENST00000284674	human	ensembl	74_37	+1	known	missense	c.368	p.A123V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR26	HGNC	ENSG00000154478	tier1	-	-	13	0	0.00	11	10	47.62
GTF2IRD2P1	0	genome.wustl.edu	37	7	72664015	72664015	+	RNA	SNP	C	C	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	72664015	72664015	C	G	SNP	GTF2IRD2P1	ENST00000425256	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.912	-	-	-	no_errors	GTF2IRD2P1	HGNC	ENSG00000214544				12	0	0.00	9	5	35.71
GTF2IRD2P1	0	genome.wustl.edu	37	7	72664015	72664016	+	RNA	INS	-	-	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	72664015	72664016	0	G	INS	GTF2IRD2P1	ENST00000425256	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.912:0.964	-	-	-	no_errors	GTF2IRD2P1	HGNC	ENSG00000214544				12	0	0.00	11	3	21.43
HDGFL1	0	genome.wustl.edu	37	6	22570346	22570347	+	In_Frame_Ins	INS	-	-	GGC			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	6	22570346	22570347	-	GGC	INS	HDGFL1	ENST00000230012	human	ensembl	74_37	+1	known	in_frame_ins	c.542_543	p.185in_frame_insA	0.000:0.000	NULL	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	HDGFL1	HGNC	ENSG00000112273	tier1			13	0	0.00	6	4	40.00
HDLBP	0	genome.wustl.edu	37	2	242170211	242170211	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	242170211	242170211	C	T	SNP	HDLBP	ENST00000310931	human	ensembl	74_37	-1	known	missense	c.3437	p.R1146H	0.951	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	HDLBP	HGNC	ENSG00000115677	tier1	-	-	59	0	0.00	47	9	16.07
HGFAC	0	genome.wustl.edu	37	4	3443800	3443800	+	Silent	SNP	G	G	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	4	3443800	3443800	G	C	SNP	HGFAC	ENST00000382774	human	ensembl	74_37	+1	known	silent	c.72	p.L24	0.998	pirsf_Coagulation_fac_XIIa/HGFA	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EG-like_dom,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGFAC	HGNC	ENSG00000109758	tier1	-	-	37	0	0.00	50	6	10.71
HIBCH	0	genome.wustl.edu	37	2	191175496	191175496	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	191175496	191175496	G	T	SNP	HIBCH	ENST00000359678	human	ensembl	74_37	-1	known	missense	c.62	p.T21N	0.676	NULL	pfam_Crotonase_core_superfam	-	no_errors	HIBCH	HGNC	ENSG00000198130				78	0	0.00	76	4	5.00
HLA-B	0	genome.wustl.edu	37	6	31323325	31323325	+	Nonsense_Mutation	SNP	C	C	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	6	31323325	31323325	C	A	SNP	HLA-B	ENST00000412585	human	ensembl	74_37	-1	known	nonsense	c.664	p.E222*	0.028	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-B	HGNC	ENSG00000234745	tier1	-	-	92	0	0.00	79	38	32.48
HTRA3	0	genome.wustl.edu	37	4	8295892	8295892	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	4	8295892	8295892	C	T	SNP	HTRA3	ENST00000307358	human	ensembl	74_37	+1	known	missense	c.1015	p.R339W	0.360	superfamily_Trypsin-like_Pept_dom	pfam_Peptidase_S1,pfam_Kazal_dom,pfam_PDZ,superfamily_Trypsin-like_Pept_dom,superfamily_PDZ,smart_IGFBP-like,smart_Kazal_dom,smart_PDZ,pfscan_PDZ,prints_Peptidase_S1C	-	no_errors	HTRA3	HGNC	ENSG00000170801				38	0	0.00	36	3	7.69
HYOU1	0	genome.wustl.edu	37	11	118925330	118925330	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	118925330	118925330	C	T	SNP	HYOU1	ENST00000404233	human	ensembl	74_37	-1	known	missense	c.554	p.R185H	1.000	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HYOU1	HGNC	ENSG00000149428	tier1	-	-	35	0	0.00	46	4	8.00
IFI44L	0	genome.wustl.edu	37	1	79093944	79093944	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	79093944	79093944	G	T	SNP	IFI44L	ENST00000370751	human	ensembl	74_37	+1	known	missense	c.344	p.R115L	0.000	NULL	superfamily_P-loop_NTPase	-	no_errors	IFI44L	HGNC	ENSG00000137959				58	0	0.00	56	3	5.08
IFNGR1	0	genome.wustl.edu	37	6	137522074	137522074	+	Frame_Shift_Del	DEL	A	A	-			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	6	137522074	137522074	A	-	DEL	IFNGR1	ENST00000367739	human	ensembl	74_37	-1	known	frame_shift_del	c.805	p.Y269fs	0.000	pfam_Interferon_gamma_pox/mammal	pfam_Interferon_gamma_pox/mammal,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,prints_Interferon_gamma_rcpt_asu	-	no_errors	IFNGR1	HGNC	ENSG00000027697	tier1			46	0	0.00	27	24	47.06
IL7	0	genome.wustl.edu	37	8	79710313	79710313	+	Silent	SNP	T	T	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	79710313	79710313	T	C	SNP	IL7	ENST00000263851	human	ensembl	74_37	-1	known	silent	c.141	p.Q47	0.005	pfam_IL-7/IL-9_fam,smart_IL-7,pirsf_IL-7,prints_IL-7	pfam_IL-7/IL-9_fam,smart_IL-7,pirsf_IL-7,prints_IL-7	-	no_errors	IL7	HGNC	ENSG00000104432	tier1	-	-	22	0	0.00	28	7	20.00
IRS4	0	genome.wustl.edu	37	X	107976167	107976167	+	Silent	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	X	107976167	107976167	C	T	SNP	IRS4	ENST00000372129	human	ensembl	74_37	-1	known	silent	c.3408	p.A1136	0.019	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS4	HGNC	ENSG00000133124	tier1	-	-	42	0	0.00	34	11	24.44
ITGA9	0	genome.wustl.edu	37	3	37821442	37821442	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	3	37821442	37821442	G	T	SNP	ITGA9	ENST00000264741	human	ensembl	74_37	+1	known	missense	c.2717	p.S906I	1.000	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA9	HGNC	ENSG00000144668				25	0	0.00	42	4	8.70
KCNAB2	0	genome.wustl.edu	37	1	6157447	6157447	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	6157447	6157447	G	T	SNP	KCNAB2	ENST00000602612	human	ensembl	74_37	+1	putative	missense	c.1044	p.R348S	0.007	NULL	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_K_chnl_volt-dep_bsu_KCNAB-rel,prints_K_chnl_volt-dep_bsu_KCNAB2,prints_K_chnl_volt-dep_bsu_KCNAB1,tigrfam_K_chnl_volt-dep_bsu_KCNAB	-	no_errors	KCNAB2	HGNC	ENSG00000069424	tier1	-	-	44	0	0.00	43	4	8.51
KCNB2	0	genome.wustl.edu	37	8	73480515	73480515	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	73480515	73480515	G	T	SNP	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	missense	c.546	p.L182F	1.000	prints_K_chnl_volt-dep_Kv2	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674	tier1	-	-	39	0	0.00	54	20	27.03
KDM3A	0	genome.wustl.edu	37	2	86705840	86705840	+	Silent	SNP	A	A	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	86705840	86705840	A	G	SNP	KDM3A	ENST00000312912	human	ensembl	74_37	+1	known	silent	c.2298	p.S766	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3A	HGNC	ENSG00000115548				53	0	0.00	57	3	5.00
KDM3B	0	genome.wustl.edu	37	5	137759943	137759943	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	137759943	137759943	G	C	SNP	KDM3B	ENST00000314358	human	ensembl	74_37	+1	known	missense	c.4152	p.W1384C	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3B	HGNC	ENSG00000120733	tier1	-	-	54	0	0.00	53	37	41.11
KIAA0408	0	genome.wustl.edu	37	6	127770975	127770975	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	6	127770975	127770975	G	T	SNP	KIAA0408	ENST00000483725	human	ensembl	74_37	-1	novel	missense	c.570	p.N190K	0.996	NULL	NULL	-	no_errors	KIAA0408	HGNC	ENSG00000189367	tier1	-	-	34	0	0.00	49	4	7.55
KIAA1109	0	genome.wustl.edu	37	4	123147861	123147861	+	Splice_Site	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	4	123147861	123147861	G	A	SNP	KIAA1109	ENST00000264501	human	ensembl	74_37	+1	known	splice_site	c.2794-1	e22-1	1.000	-	-	-	no_errors	KIAA1109	HGNC	ENSG00000138688	tier1	-	-	44	0	0.00	27	25	48.08
KIAA1191	0	genome.wustl.edu	37	5	175775305	175775305	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	175775305	175775305	C	A	SNP	KIAA1191	ENST00000298569	human	ensembl	74_37	-1	known	missense	c.514	p.A172S	0.422	NULL	NULL	-	no_errors	KIAA1191	HGNC	ENSG00000122203	tier1	-	-	76	0	0.00	65	10	13.33
KIAA1407	0	genome.wustl.edu	37	3	113684161	113684161	+	Frame_Shift_Del	DEL	T	T	-			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	3	113684161	113684161	T	-	DEL	KIAA1407	ENST00000295878	human	ensembl	74_37	-1	known	frame_shift_del	c.2652	p.K884fs	0.000	NULL	NULL	-	no_errors	KIAA1407	HGNC	ENSG00000163617	tier1			25	0	0.00	38	2	5.00
KIAA1549	0	genome.wustl.edu	37	7	138603524	138603524	+	Nonsense_Mutation	SNP	A	A	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	138603524	138603524	A	T	SNP	KIAA1549	ENST00000422774	human	ensembl	74_37	-1	known	nonsense	c.848	p.L283*	0.001	NULL	NULL	-	no_errors	KIAA1549	HGNC	ENSG00000122778	tier1	-	-	18	0	0.00	17	11	39.29
KIAA1683	0	genome.wustl.edu	37	19	18368333	18368333	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	18368333	18368333	C	T	SNP	KIAA1683	ENST00000392413	human	ensembl	74_37	-1	known	missense	c.3761	p.R1254H	0.997	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	KIAA1683	HGNC	ENSG00000130518				22	0	0.00	22	3	12.00
KIAA2022	0	genome.wustl.edu	37	X	73960195	73960195	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	X	73960195	73960195	G	T	SNP	KIAA2022	ENST00000055682	human	ensembl	74_37	-1	known	missense	c.4197	p.S1399R	1.000	NULL	NULL	-	no_errors	KIAA2022	HGNC	ENSG00000050030	tier1	-	-	40	0	0.00	46	26	36.11
KIF24	0	genome.wustl.edu	37	9	34306372	34306372	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	9	34306372	34306372	G	T	SNP	KIF24	ENST00000379166	human	ensembl	74_37	-1	known	missense	c.691	p.R231S	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_SAM_type1,superfamily_P-loop_NTPase,superfamily_SAM/pointed,smart_Kinesin_motor_dom,pfscan_SAM,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF24	HGNC	ENSG00000186638				28	0	0.00	29	2	6.45
KMT2A	0	genome.wustl.edu	37	11	118343016	118343017	+	Frame_Shift_Ins	INS	-	-	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	118343016	118343017	-	G	INS	KMT2A	ENST00000389506	human	ensembl	74_37	+1	known	frame_shift_ins	c.1142_1143	p.A383fs	1.000:1.000	pirsf_MeTrfase_trithorax	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	KMT2A	HGNC	ENSG00000118058	tier1			27	0	0.00	16	6	27.27
KMT2A	0	genome.wustl.edu	37	11	118348808	118348808	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	118348808	118348808	G	A	SNP	KMT2A	ENST00000389506	human	ensembl	74_37	+1	known	missense	c.3461	p.R1154Q	1.000	pfam_Znf_CXXC,pirsf_MeTrfase_trithorax,pfscan_Znf_CXXC	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	KMT2A	HGNC	ENSG00000118058	tier1	-	-	62	0	0.00	28	19	40.43
KMT2D	0	genome.wustl.edu	37	12	49425503	49425503	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	12	49425503	49425503	G	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	nonsense	c.12985	p.Q4329*	0.985	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	53	0	0.00	46	14	22.58
KRT5	0	genome.wustl.edu	37	12	52910941	52910941	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	12	52910941	52910941	T	C	SNP	KRT5	ENST00000252242	human	ensembl	74_37	-1	known	missense	c.1168	p.N390D	1.000	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT5	HGNC	ENSG00000186081				16	0	0.00	34	9	20.93
KRT85	0	genome.wustl.edu	37	12	52757174	52757174	+	Silent	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	12	52757174	52757174	G	A	SNP	KRT85	ENST00000257901	human	ensembl	74_37	-1	known	silent	c.807	p.A269	0.959	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT85	HGNC	ENSG00000135443	tier1	-	-	34	0	0.00	43	26	37.68
KRTAP2-3	0	genome.wustl.edu	37	17	39216185	39216185	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	17	39216185	39216185	C	T	SNP	KRTAP2-3	ENST00000391418	human	ensembl	74_37	-1	known	missense	c.118	p.V40M	1.000	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP2-3	HGNC	ENSG00000212724	tier1	-	-	42	0	0.00	39	25	39.06
LAIR2	0	genome.wustl.edu	37	19	55020248	55020248	+	Missense_Mutation	SNP	G	G	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	55020248	55020248	G	C	SNP	LAIR2	ENST00000301202	human	ensembl	74_37	+1	known	missense	c.368	p.S123T	0.001	NULL	smart_Ig_sub	-	no_errors	LAIR2	HGNC	ENSG00000167618				49	0	0.00	53	4	7.02
LHCGR	0	genome.wustl.edu	37	2	48914886	48914886	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	48914886	48914886	G	T	SNP	LHCGR	ENST00000294954	human	ensembl	74_37	-1	known	missense	c.2050	p.H684N	0.053	prints_LSH_rcpt	pfam_GPCR_Rhodpsn,prints_LSH_rcpt,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,prints_TSH_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	LHCGR	HGNC	ENSG00000138039				47	0	0.00	37	2	5.13
LOC100505501	0	genome.wustl.edu	37	8	60031650	60031650	+	RNA	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	60031650	60031650	G	T	SNP	LOC100505501	ENST00000523683	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-25K19.1	Clone_based_vega_gene	ENSG00000167912	tier1	-	-	13	0	0.00	16	6	27.27
LOC100505989	0	genome.wustl.edu	37	4	165722353	165722353	+	RNA	SNP	A	A	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	4	165722353	165722353	A	G	SNP	LOC100505989	ENST00000507311	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.041	-	-	-	no_errors	RP11-294O2.2	Clone_based_vega_gene	ENSG00000248771	tier1	-	-	38	0	0.00	50	4	7.41
LOC728715	0	genome.wustl.edu	37	12	9728362	9728362	+	RNA	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	12	9728362	9728362	G	T	SNP	LOC728715	ENST00000520314	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.088	-	-	-	no_errors	RP11-726G1.1	Clone_based_vega_gene	ENSG00000214776	tier1	-	-	72	0	0.00	64	31	32.63
LOC728715	0	genome.wustl.edu	37	12	9728368	9728368	+	RNA	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	12	9728368	9728368	G	A	SNP	LOC728715	ENST00000520314	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.031	-	-	-	no_errors	RP11-726G1.1	Clone_based_vega_gene	ENSG00000214776	tier1	-	-	70	0	0.00	59	31	34.44
LRP12	0	genome.wustl.edu	37	8	105509702	105509702	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	105509702	105509702	T	C	SNP	LRP12	ENST00000424843	human	ensembl	74_37	-1	known	missense	c.1021	p.N341D	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1	-	-	33	0	0.00	68	4	5.56
LRPPRC	0	genome.wustl.edu	37	2	44190729	44190729	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	44190729	44190729	G	A	SNP	LRPPRC	ENST00000260665	human	ensembl	74_37	-1	known	nonsense	c.1486	p.Q496*	0.998	NULL	pfam_Pentatricopeptide_repeat,tigrfam_Pentatricopeptide_repeat	-	no_errors	LRPPRC	HGNC	ENSG00000138095				42	0	0.00	51	4	7.27
LRRC4C	0	genome.wustl.edu	37	11	40137317	40137317	+	Nonsense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	40137317	40137317	G	A	SNP	LRRC4C	ENST00000527150	human	ensembl	74_37	-1	known	nonsense	c.526	p.R176*	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	LRRC4C	HGNC	ENSG00000148948	tier1	-	-	30	0	0.00	26	13	33.33
LRRC66	0	genome.wustl.edu	37	4	52861635	52861635	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	4	52861635	52861635	C	T	SNP	LRRC66	ENST00000343457	human	ensembl	74_37	-1	known	missense	c.1553	p.R518H	0.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC66	HGNC	ENSG00000188993				39	0	0.00	35	3	7.89
LRRK1	0	genome.wustl.edu	37	15	101554585	101554585	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	15	101554585	101554585	C	T	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	missense	c.1484	p.T495I	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237	tier1	-	-	26	0	0.00	34	4	10.53
MAGEC1	0	genome.wustl.edu	37	X	140993740	140993740	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	X	140993740	140993740	G	T	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	nonsense	c.550	p.E184*	0.100	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	tier1	-	-	151	0	0.00	213	61	22.26
MAGI3	0	genome.wustl.edu	37	1	114184871	114184871	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	114184871	114184871	G	A	SNP	MAGI3	ENST00000369611	human	ensembl	74_37	+1	known	missense	c.1699	p.A567T	1.000	superfamily_PDZ	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI3	HGNC	ENSG00000081026	tier1	-	-	39	0	0.00	66	4	5.71
MECP2	0	genome.wustl.edu	37	X	153295833	153295833	+	Silent	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	X	153295833	153295833	G	A	SNP	MECP2	ENST00000303391	human	ensembl	74_37	-1	known	silent	c.1446	p.T482	1.000	pirsf_Me_CpG-bd_MeCP2	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,superfamily_Ig_E-set,smart_Methyl_CpG_DNA-bd,pirsf_Me_CpG-bd_MeCP2,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MECP2	HGNC	ENSG00000169057	tier1	rs76895094	-	53	0	0.00	50	26	34.21
METTL4	0	genome.wustl.edu	37	18	2563854	2563854	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	18	2563854	2563854	C	T	SNP	METTL4	ENST00000574538	human	ensembl	74_37	-1	known	missense	c.401	p.R134H	0.986	NULL	pfam_MT-A70-like,pfscan_MT-A70-like	-	no_errors	METTL4	HGNC	ENSG00000101574				27	0	0.00	20	2	9.09
MGAM	0	genome.wustl.edu	37	7	141764224	141764224	+	Silent	SNP	T	T	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	141764224	141764224	T	G	SNP	MGAM	ENST00000549489	human	ensembl	74_37	+1	known	silent	c.4386	p.L1462	1.000	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335	tier1	-	-	61	0	0.00	36	28	43.75
MGAM	0	genome.wustl.edu	37	7	141764227	141764227	+	Silent	SNP	T	T	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	141764227	141764227	T	C	SNP	MGAM	ENST00000549489	human	ensembl	74_37	+1	known	silent	c.4389	p.C1463	1.000	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335	tier1	rs3087317	-	59	0	0.00	36	29	44.62
MLIP	0	genome.wustl.edu	37	6	54122159	54122159	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	6	54122159	54122159	G	T	SNP	MLIP	ENST00000274897	human	ensembl	74_37	+1	known	missense	c.1371	p.E457D	1.000	NULL	NULL	-	no_errors	MLIP	HGNC	ENSG00000146147	tier1	-	-	67	0	0.00	69	4	5.48
MPP4	0	genome.wustl.edu	37	2	202552060	202552060	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	202552060	202552060	G	T	SNP	MPP4	ENST00000359962	human	ensembl	74_37	-1	known	missense	c.314	p.P105H	0.518	pfam_L27_C,smart_L27,pfscan_L27	pfam_GK/Ca_channel_bsu,pfam_L27_C,pfam_PDZ,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	MPP4	HGNC	ENSG00000082126	tier1	-	-	53	0	0.00	72	4	5.26
MT-RNR2	0	genome.wustl.edu	37	MT	2701	2701	+	RNA	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	MT	2701	2701	G	A	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR2	HGNC	ENSG00000210082	tier1	-	-	716	0	0.00	1315	185	12.33
MTF1	0	genome.wustl.edu	37	1	38280975	38280975	+	Silent	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	38280975	38280975	G	T	SNP	MTF1	ENST00000373036	human	ensembl	74_37	-1	known	silent	c.2095	p.R699	0.982	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	MTF1	HGNC	ENSG00000188786				28	0	0.00	67	4	5.63
MUC17	0	genome.wustl.edu	37	7	100676006	100676006	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	100676006	100676006	G	T	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.1309	p.A437S	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876	tier1	-	-	49	0	0.00	84	16	16.00
MUC2	0	genome.wustl.edu	37	11	1096386	1096386	+	Silent	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	1096386	1096386	C	T	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	silent	c.6411	p.Y2137	0.997	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788				37	0	0.00	36	2	5.26
MYSM1	0	genome.wustl.edu	37	1	59131214	59131214	+	Silent	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	59131214	59131214	G	T	SNP	MYSM1	ENST00000472487	human	ensembl	74_37	-1	known	silent	c.2121	p.T707	1.000	smart_JAB_MPN_dom	pfam_SWIRM,pfam_JAB_MPN_dom,pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,smart_JAB_MPN_dom,pfscan_SWIRM,pfscan_Myb-like_dom	-	no_errors	MYSM1	HGNC	ENSG00000162601	tier1	-	-	68	0	0.00	60	4	6.25
NBN	0	genome.wustl.edu	37	8	90949256	90949256	+	Frame_Shift_Del	DEL	A	A	-			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	90949256	90949256	A	-	DEL	NBN	ENST00000265433	human	ensembl	74_37	-1	known	frame_shift_del	c.2232	p.F744fs	1.000	pfam_DNA-repair_Nbs1_C,pirsf_Nibrin_met	pfam_DNA-repair_Nbs1_C,pfam_FHA_dom,superfamily_SMAD_FHA_domain,superfamily_BRCT_dom,smart_FHA_dom,pirsf_Nibrin_met,pfscan_FHA_dom	-	no_errors	NBN	HGNC	ENSG00000104320	tier1			39	0	0.00	49	9	15.52
NCAM2	0	genome.wustl.edu	37	21	22658646	22658646	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	21	22658646	22658646	C	A	SNP	NCAM2	ENST00000400546	human	ensembl	74_37	+1	known	missense	c.395	p.A132E	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom,prints_Neural_cell_adh	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom,prints_Neural_cell_adh	-	no_errors	NCAM2	HGNC	ENSG00000154654				29	0	0.00	29	4	12.12
NFKBIZ	0	genome.wustl.edu	37	3	101574724	101574724	+	Missense_Mutation	SNP	T	T	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	3	101574724	101574724	T	A	SNP	NFKBIZ	ENST00000326172	human	ensembl	74_37	+1	known	missense	c.1802	p.M601K	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	NFKBIZ	HGNC	ENSG00000144802	tier1	-	-	60	0	0.00	60	4	6.25
NHLRC2	0	genome.wustl.edu	37	10	115668044	115668044	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	10	115668044	115668044	G	T	SNP	NHLRC2	ENST00000369301	human	ensembl	74_37	+1	known	nonsense	c.1930	p.E644*	1.000	NULL	pfam_NHL_repeat,superfamily_Thioredoxin-like_fold,pfscan_NHL_repeat_subgr	-	no_errors	NHLRC2	HGNC	ENSG00000196865				31	0	0.00	44	4	8.33
NHLRC3	0	genome.wustl.edu	37	13	39622028	39622028	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	13	39622028	39622028	C	T	SNP	NHLRC3	ENST00000379600	human	ensembl	74_37	+1	known	missense	c.1009	p.P337S	0.648	NULL	pfam_NHL_repeat,pfscan_NHL_repeat_subgr	-	no_errors	NHLRC3	HGNC	ENSG00000188811	tier1	-	-	20	0	0.00	14	7	33.33
NLRC3	0	genome.wustl.edu	37	16	3613041	3613041	+	Silent	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	16	3613041	3613041	G	A	SNP	NLRC3	ENST00000448023	human	ensembl	74_37	-1	known	silent	c.2038	p.L680	1.000	NULL	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRC3	HGNC	ENSG00000167984				96	0	0.00	70	4	5.33
NLRC5	0	genome.wustl.edu	37	16	57060578	57060581	+	Frame_Shift_Del	DEL	CCCT	CCCT	-			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	CCCT	CCCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	16	57060578	57060581	CCCT	-	DEL	NLRC5	ENST00000262510	human	ensembl	74_37	+1	known	frame_shift_del	c.1723_1726	p.P575fs	0.001:0.047:0.060:0.978	NULL	pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_NACHT_NTPase	-	no_errors	NLRC5	HGNC	ENSG00000140853	tier1			35	0	0.00	9	6	40.00
NOLC1	0	genome.wustl.edu	37	10	103912168	103912168	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	10	103912168	103912168	A	T	SNP	NOLC1	ENST00000405356	human	ensembl	74_37	+1	known	missense	c.1	p.M1L	0.982	NULL	pfam_SRP40_C,pfscan_LisH_dimerisation	-	no_errors	NOLC1	HGNC	ENSG00000166197	tier1	-	-	62	0	0.00	44	14	24.14
NOTCH3	0	genome.wustl.edu	37	19	15281251	15281251	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	15281251	15281251	G	A	SNP	NOTCH3	ENST00000263388	human	ensembl	74_37	-1	known	missense	c.5005	p.R1669C	1.000	pirsf_Notch	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_dom,pfam_Notch_NODP_dom,pfam_Notch_NOD_dom,pfam_EGF_extracell,pfam_DUF3454_notch,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_3,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH3	HGNC	ENSG00000074181	tier1	-	-	23	0	0.00	19	13	40.62
NOVA1	0	genome.wustl.edu	37	14	27064755	27064755	+	Silent	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	14	27064755	27064755	G	A	SNP	NOVA1	ENST00000539517	human	ensembl	74_37	-1	known	silent	c.141	p.D47	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	NOVA1	HGNC	ENSG00000139910				31	0	0.00	34	2	5.56
NRG1	0	genome.wustl.edu	37	8	32621513	32621513	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	32621513	32621513	G	A	SNP	NRG1	ENST00000338921	human	ensembl	74_37	+1	known	missense	c.1540	p.A514T	0.039	pfam_Neuregulin_1_C	pfam_Neuregulin_1_C,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Ig-like_dom,prints_Neuregulin	-	no_errors	NRG1	HGNC	ENSG00000157168	tier1	-	-	45	0	0.00	68	22	24.44
NSD1	0	genome.wustl.edu	37	5	176694593	176694593	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	176694593	176694593	C	T	SNP	NSD1	ENST00000439151	human	ensembl	74_37	+1	known	missense	c.5177	p.P1726L	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	NSD1	HGNC	ENSG00000165671	tier1	-	-	25	0	0.00	18	21	53.85
NSD1	0	genome.wustl.edu	37	5	176709465	176709465	+	Splice_Site	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	176709465	176709465	G	A	SNP	NSD1	ENST00000439151	human	ensembl	74_37	+1	known	splice_site	c.5893-1	e18-1	1.000	-	-	-	no_errors	NSD1	HGNC	ENSG00000165671	tier1	-	-	44	0	0.00	47	24	33.80
NUB1	0	genome.wustl.edu	37	7	151065005	151065005	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	151065005	151065005	G	A	SNP	NUB1	ENST00000568733	human	ensembl	74_37	+1	known	missense	c.1118	p.R373Q	0.909	superfamily_UBA-like	pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	NUB1	HGNC	ENSG00000013374	tier1	-	-	31	0	0.00	34	15	30.61
NUP160	0	genome.wustl.edu	37	11	47801978	47801978	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	47801978	47801978	G	A	SNP	NUP160	ENST00000378460	human	ensembl	74_37	-1	known	missense	c.4138	p.P1380S	0.953	NULL	pfam_Nucleoporin_Nup160	-	no_errors	NUP160	HGNC	ENSG00000030066				46	0	0.00	56	4	6.67
OGFR	0	genome.wustl.edu	37	20	61444312	61444312	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	20	61444312	61444312	G	T	SNP	OGFR	ENST00000290291	human	ensembl	74_37	+1	known	missense	c.1345	p.A449S	0.000	NULL	pfam_OGF_rcpt,pfam_OGF_rcpt_rpt	-	no_errors	OGFR	HGNC	ENSG00000060491	tier1	-	-	31	0	0.00	26	4	13.33
OR1D4	0	genome.wustl.edu	37	17	3144529	3144529	+	RNA	SNP	T	T	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	17	3144529	3144529	T	C	SNP	OR1D4	ENST00000531680	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.148	-	-	-	no_errors	OR1D4	HGNC	ENSG00000255095	tier1	-	-	23	0	0.00	13	16	55.17
OR2T11	0	genome.wustl.edu	37	1	248790145	248790145	+	Silent	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	248790145	248790145	G	T	SNP	OR2T11	ENST00000330803	human	ensembl	74_37	-1	known	silent	c.285	p.G95	0.828	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T11	HGNC	ENSG00000183130				52	0	0.00	57	3	5.00
OR4S1	0	genome.wustl.edu	37	11	48328641	48328641	+	Silent	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	48328641	48328641	C	T	SNP	OR4S1	ENST00000319988	human	ensembl	74_37	+1	known	silent	c.867	p.N289	0.010	prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4S1	HGNC	ENSG00000176555	tier1	-	-	26	0	0.00	25	4	13.79
OR6A2	0	genome.wustl.edu	37	11	6816277	6816277	+	Silent	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	6816277	6816277	G	T	SNP	OR6A2	ENST00000332601	human	ensembl	74_37	-1	known	silent	c.663	p.A221	0.050	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6A2	HGNC	ENSG00000184933	tier1	-	-	20	0	0.00	15	8	34.78
PCDH20	0	genome.wustl.edu	37	13	61987736	61987736	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	13	61987736	61987736	C	T	SNP	PCDH20	ENST00000409186	human	ensembl	74_37	-1	known	missense	c.496	p.V166I	0.997	pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH20	HGNC	ENSG00000197991	tier1	-	-	47	0	0.00	36	21	36.84
PCDHGA6	0	genome.wustl.edu	37	5	140755131	140755131	+	Missense_Mutation	SNP	A	A	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	140755131	140755131	A	G	SNP	PCDHGA6	ENST00000517434	human	ensembl	74_37	+1	known	missense	c.1481	p.D494G	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA6	HGNC	ENSG00000253731				56	0	0.00	62	4	6.06
PDZD7	0	genome.wustl.edu	37	10	102789899	102789899	+	Silent	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	10	102789899	102789899	G	A	SNP	PDZD7	ENST00000370215	human	ensembl	74_37	-1	known	silent	c.78	p.S26	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD7	HGNC	ENSG00000186862	tier1	-	-	111	0	0.00	68	40	37.04
PGD	0	genome.wustl.edu	37	1	10468184	10468184	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	10468184	10468184	C	A	SNP	PGD	ENST00000270776	human	ensembl	74_37	+1	known	missense	c.506	p.P169H	1.000	pfam_6PGDH_NADP-bd,tigrfam_6PGDH_decarbox	pfam_6PGDH_C,pfam_6PGDH_NADP-bd,superfamily_6-PGluconate_DH_C-like,tigrfam_6PGDH_decarbox	-	no_errors	PGD	HGNC	ENSG00000142657				26	0	0.00	43	4	8.51
PHKA2	0	genome.wustl.edu	37	X	18915365	18915365	+	Silent	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	X	18915365	18915365	C	T	SNP	PHKA2	ENST00000379942	human	ensembl	74_37	-1	known	silent	c.3198	p.Q1066	1.000	NULL	pfam_Glyco_hydro_15,superfamily_6-hairpin_glycosidase-like	-	no_errors	PHKA2	HGNC	ENSG00000044446				54	0	0.00	52	4	7.14
PKHD1L1	0	genome.wustl.edu	37	8	110493751	110493751	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	110493751	110493751	G	T	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	missense	c.9417	p.W3139C	1.000	pfam_G8_domain	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038	tier1	-	-	61	0	0.00	75	4	5.06
PKP4	0	genome.wustl.edu	37	2	159488428	159488428	+	Silent	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	159488428	159488428	G	A	SNP	PKP4	ENST00000389759	human	ensembl	74_37	+1	known	silent	c.1317	p.Q439	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP4	HGNC	ENSG00000144283	tier1	-	-	35	0	0.00	46	22	32.35
PMP2	0	genome.wustl.edu	37	8	82359617	82359617	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	82359617	82359617	C	T	SNP	PMP2	ENST00000256103	human	ensembl	74_37	-1	known	missense	c.5	p.S2N	1.000	NULL	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Fatty_acid-bd	-	no_errors	PMP2	HGNC	ENSG00000147588	tier1	-	-	47	0	0.00	74	4	5.13
POSTN	0	genome.wustl.edu	37	13	38137315	38137316	+	RNA	INS	-	-	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	13	38137315	38137316	-	A	INS	POSTN	ENST00000478947	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.014:0.028	-	-	-	no_errors	POSTN	HGNC	ENSG00000133110	tier1			15	0	0.00	21	2	8.70
PPFIA2	0	genome.wustl.edu	37	12	81839369	81839369	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	12	81839369	81839369	G	T	SNP	PPFIA2	ENST00000549396	human	ensembl	74_37	-1	known	missense	c.536	p.S179Y	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA2	HGNC	ENSG00000139220	tier1	-	-	79	0	0.00	59	16	21.33
PPP1R18	0	genome.wustl.edu	37	6	30653411	30653411	+	Missense_Mutation	SNP	T	T	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	6	30653411	30653411	T	C	SNP	PPP1R18	ENST00000274853	human	ensembl	74_37	-1	known	missense	c.385	p.M129V	0.023	NULL	NULL	-	no_errors	PPP1R18	HGNC	ENSG00000146112	tier1	-	-	48	0	0.00	31	23	42.59
PPP5C	0	genome.wustl.edu	37	19	46857022	46857022	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	46857022	46857022	G	A	SNP	PPP5C	ENST00000012443	human	ensembl	74_37	+1	known	missense	c.139	p.A47T	1.000	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pirsf_Ser/Thr_PPase_5,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_PEstase_dom,pfam_PPP_dom,pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,smart_Ser/Thr-sp_prot-phosphatase,pirsf_Ser/Thr_PPase_5,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP5C	HGNC	ENSG00000011485				27	0	0.00	25	2	7.41
PRKD2	0	genome.wustl.edu	37	19	47178336	47178336	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	47178336	47178336	C	T	SNP	PRKD2	ENST00000291281	human	ensembl	74_37	-1	known	missense	c.2378	p.R793H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD2	HGNC	ENSG00000105287				22	0	0.00	31	2	6.06
PRKDC	0	genome.wustl.edu	37	8	48773474	48773474	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	48773474	48773474	G	T	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	missense	c.6041	p.A2014E	0.187	pfam_NUC194,superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1	-	-	43	0	0.00	76	4	5.00
PROB1	0	genome.wustl.edu	37	5	138729895	138729895	+	Silent	SNP	C	C	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	138729895	138729895	C	A	SNP	PROB1	ENST00000434752	human	ensembl	74_37	-1	known	silent	c.876	p.L292	0.019	NULL	NULL	-	no_errors	PROB1	HGNC	ENSG00000228672	tier1	-	-	163	0	0.00	125	74	37.19
PRPF3	0	genome.wustl.edu	37	1	150318310	150318310	+	RNA	SNP	T	T	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	150318310	150318310	T	C	SNP	PRPF3	ENST00000476970	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PRPF3	HGNC	ENSG00000117360	tier1	-	-	9	0	0.00	7	7	50.00
PTEN	0	genome.wustl.edu	37	10	89717619	89717619	+	Missense_Mutation	SNP	T	T	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	10	89717619	89717619	T	G	SNP	PTEN	ENST00000371953	human	ensembl	74_37	+1	known	missense	c.644	p.F215C	1.000	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tensin_phosphatase_C2-dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_dom,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862	tier1	-	-	71	0	0.00	53	30	36.14
PTPN3	0	genome.wustl.edu	37	9	112225697	112225697	+	Silent	SNP	A	A	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	9	112225697	112225697	A	T	SNP	PTPN3	ENST00000374541	human	ensembl	74_37	-1	known	silent	c.18	p.R6	1.000	pirsf_Tyr_Pase_non-rcpt_typ-3/4	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_PDZ,pfam_Dual-sp_phosphatase_cat-dom,superfamily_FERM_central,superfamily_PDZ,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-3/4,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,prints_Ez/rad/moesin_like,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN3	HGNC	ENSG00000070159	tier1	-	-	58	0	0.00	51	4	7.27
RBM10	0	genome.wustl.edu	37	X	47040705	47040705	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	X	47040705	47040705	G	A	SNP	RBM10	ENST00000377604	human	ensembl	74_37	+1	known	missense	c.1340	p.S447N	1.000	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM10	HGNC	ENSG00000182872	tier1	-	-	48	0	0.00	64	4	5.88
RC3H1	0	genome.wustl.edu	37	1	173931047	173931047	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	173931047	173931047	C	T	SNP	RC3H1	ENST00000258349	human	ensembl	74_37	-1	known	missense	c.2018	p.R673H	0.991	NULL	pfam_Znf_CCCH,smart_Znf_RING,smart_Znf_CCCH,pfscan_Znf_RING	-	no_errors	RC3H1	HGNC	ENSG00000135870				49	0	0.00	56	3	5.08
RHD	0	genome.wustl.edu	37	1	25611165	25611165	+	Silent	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	25611165	25611165	C	T	SNP	RHD	ENST00000328664	human	ensembl	74_37	+1	known	silent	c.250	p.L84	0.877	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	-	no_errors	RHD	HGNC	ENSG00000187010	tier1	-	-	35	0	0.00	39	4	9.30
RHOBTB1	0	genome.wustl.edu	37	10	62631234	62631234	+	RNA	SNP	T	T	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	10	62631234	62631234	T	G	SNP	RHOBTB1	ENST00000461910	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.047	-	-	-	no_errors	RHOBTB1	HGNC	ENSG00000072422	tier1	-	-	24	0	0.00	28	9	24.32
RNPEPL1	0	genome.wustl.edu	37	2	241515026	241515026	+	Silent	SNP	A	A	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	241515026	241515026	A	G	SNP	RNPEPL1	ENST00000270357	human	ensembl	74_37	+1	known	silent	c.816	p.A272	1.000	NULL	pfam_Peptidase_M1_C,pfam_Peptidase_M1_N,superfamily_ARM-type_fold,prints_Peptidase_M1_N	-	no_errors	RNPEPL1	HGNC	ENSG00000142327	tier1	-	-	41	0	0.00	48	4	7.69
RTTN	0	genome.wustl.edu	37	18	67869157	67869157	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	18	67869157	67869157	G	T	SNP	RTTN	ENST00000255674	human	ensembl	74_37	-1	known	missense	c.460	p.Q154K	0.963	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	RTTN	HGNC	ENSG00000176225	tier1	-	-	72	0	0.00	42	30	41.67
RYR1	0	genome.wustl.edu	37	19	39028578	39028578	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	39028578	39028578	G	T	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	missense	c.11667	p.L3889F	1.000	pfam_RIH_assoc-dom	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218	tier1	-	-	43	0	0.00	37	23	37.70
SACS	0	genome.wustl.edu	37	13	23906661	23906661	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	13	23906661	23906661	C	T	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.11354	p.R3785K	0.980	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				48	0	0.00	32	2	5.88
SEMA6A	0	genome.wustl.edu	37	5	115827448	115827448	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	115827448	115827448	C	T	SNP	SEMA6A	ENST00000257414	human	ensembl	74_37	-1	known	missense	c.523	p.A175T	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6A	HGNC	ENSG00000092421				27	0	0.00	50	3	5.66
SH3GL3	0	genome.wustl.edu	37	15	84237334	84237334	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	15	84237334	84237334	G	A	SNP	SH3GL3	ENST00000324537	human	ensembl	74_37	+1	known	missense	c.265	p.V89M	1.000	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom	pfam_BAR_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	SH3GL3	HGNC	ENSG00000140600	tier1	-	-	36	0	0.00	36	11	23.40
SLC25A32	0	genome.wustl.edu	37	8	104427088	104427088	+	Silent	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	104427088	104427088	C	T	SNP	SLC25A32	ENST00000297578	human	ensembl	74_37	-1	known	silent	c.78	p.L26	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_uncoupling	-	no_errors	SLC25A32	HGNC	ENSG00000164933	tier1	-	-	59	0	0.00	67	19	22.09
SLCO1B1	0	genome.wustl.edu	37	12	21370110	21370110	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	12	21370110	21370110	G	T	SNP	SLCO1B1	ENST00000256958	human	ensembl	74_37	+1	known	missense	c.1555	p.A519S	0.316	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B1	HGNC	ENSG00000134538	tier1	-	-	71	0	0.00	64	19	22.89
SMAD3	0	genome.wustl.edu	37	15	67482843	67482843	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	15	67482843	67482843	C	T	SNP	SMAD3	ENST00000327367	human	ensembl	74_37	+1	known	missense	c.1247	p.S416F	1.000	superfamily_SMAD_FHA_domain,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD3	HGNC	ENSG00000166949	tier1	-	-	40	0	0.00	35	13	26.53
SMARCA4	0	genome.wustl.edu	37	19	11132513	11132513	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	11132513	11132513	C	T	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.2729	p.T910M	0.999	pfam_SNF2_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	tier1	-	-	29	0	0.00	27	9	25.00
SNAI2	0	genome.wustl.edu	37	8	49831433	49831433	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	49831433	49831433	G	A	SNP	SNAI2	ENST00000020945	human	ensembl	74_37	-1	known	missense	c.740	p.S247F	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SNAI2	HGNC	ENSG00000019549	tier1	-	-	85	0	0.00	88	34	27.87
SNAI3-AS1	0	genome.wustl.edu	37	16	88752673	88752674	+	RNA	DEL	CT	CT	-			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	16	88752673	88752674	CT	-	DEL	SNAI3-AS1	ENST00000567997	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.012	-	-	-	no_errors	SNAI3-AS1	HGNC	ENSG00000260630	tier1			17	0	0.00	14	3	17.65
SNCAIP	0	genome.wustl.edu	37	5	121786488	121786488	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	121786488	121786488	C	T	SNP	SNCAIP	ENST00000379533	human	ensembl	74_37	+1	known	missense	c.2087	p.S696F	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SNCAIP	HGNC	ENSG00000064692	tier1	-	-	38	0	0.00	32	18	36.00
SPECC1	0	genome.wustl.edu	37	17	20108050	20108050	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	17	20108050	20108050	G	T	SNP	SPECC1	ENST00000261503	human	ensembl	74_37	+1	known	nonsense	c.688	p.E230*	0.962	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1	HGNC	ENSG00000128487				18	0	0.00	29	2	6.45
SPEF2	0	genome.wustl.edu	37	5	35814614	35814614	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	35814614	35814614	G	A	SNP	SPEF2	ENST00000356031	human	ensembl	74_37	+1	known	missense	c.5428	p.G1810R	0.998	NULL	pfam_DUF1042,pfam_Adenylate_kin,pfam_HATC_dom_C,superfamily_P-loop_NTPase,superfamily_CH-domain,pfscan_CH-domain	-	no_errors	SPEF2	HGNC	ENSG00000152582	tier1	-	-	44	0	0.00	26	17	39.53
SPSB3	0	genome.wustl.edu	37	16	1827862	1827862	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	16	1827862	1827862	G	A	SNP	SPSB3	ENST00000301717	human	ensembl	74_37	-1	known	missense	c.607	p.H203Y	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,smart_SOCS_C,pfscan_B30.2/SPRY,pfscan_SOCS_C	-	no_errors	SPSB3	HGNC	ENSG00000162032	tier1	-	-	60	0	0.00	43	21	32.81
SRL	0	genome.wustl.edu	37	16	4242709	4242709	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	16	4242709	4242709	G	T	SNP	SRL	ENST00000399609	human	ensembl	74_37	-1	known	nonsense	c.867	p.Y289*	0.716	superfamily_P-loop_NTPase	pfam_Dynamin_GTPase,pfam_GTP_binding_domain,superfamily_P-loop_NTPase	-	no_errors	SRL	HGNC	ENSG00000185739	tier1	-	-	80	0	0.00	51	41	44.57
SSC5D	0	genome.wustl.edu	37	19	56012123	56012123	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	56012123	56012123	G	T	SNP	SSC5D	ENST00000389623	human	ensembl	74_37	+1	known	missense	c.2569	p.G857W	0.989	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	SSC5D	HGNC	ENSG00000179954	tier1	-	-	35	0	0.00	18	20	52.63
SSFA2	0	genome.wustl.edu	37	2	182783599	182783599	+	Nonsense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	182783599	182783599	G	T	SNP	SSFA2	ENST00000431877	human	ensembl	74_37	+1	known	nonsense	c.2983	p.E995*	0.999	NULL	NULL	-	no_errors	SSFA2	HGNC	ENSG00000138434				21	0	0.00	21	2	8.70
SSPO	0	genome.wustl.edu	37	7	149474801	149474801	+	RNA	SNP	C	C	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	149474801	149474801	C	A	SNP	SSPO	ENST00000262089	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1	-	-	72	0	0.00	45	27	36.49
STAU2	0	genome.wustl.edu	37	8	74581291	74581291	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	74581291	74581291	C	T	SNP	STAU2	ENST00000521419	human	ensembl	74_37	-1	putative	missense	c.351	p.M117I	0.000	NULL	NULL	-	no_errors	STAU2	HGNC	ENSG00000040341	tier1	-	-	236	0	0.00	292	100	24.94
STOML1	0	genome.wustl.edu	37	15	74276440	74276440	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	15	74276440	74276440	A	T	SNP	STOML1	ENST00000316900	human	ensembl	74_37	-1	known	missense	c.1035	p.D345E	0.000	pfam_SCP2_sterol-bd_dom,superfamily_SCP2_sterol-bd_dom	pfam_Band_7,pfam_SCP2_sterol-bd_dom,superfamily_SCP2_sterol-bd_dom,smart_Band_7,prints_Stomatin	-	no_errors	STOML1	HGNC	ENSG00000067221				19	0	0.00	24	4	14.29
STXBP5L	0	genome.wustl.edu	37	3	121126164	121126164	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	3	121126164	121126164	C	T	SNP	STXBP5L	ENST00000273666	human	ensembl	74_37	+1	known	missense	c.2734	p.P912S	0.998	pfam_Lgl_C_dom	pfam_LLGL2,pfam_WD40_repeat,pfam_Lgl_C_dom,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,pfscan_Synaptobrevin,prints_Lethal2_giant	-	no_errors	STXBP5L	HGNC	ENSG00000145087	tier1	-	-	21	0	0.00	26	9	25.71
SYNGR2	0	genome.wustl.edu	37	17	76168023	76168023	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	17	76168023	76168023	G	A	SNP	SYNGR2	ENST00000588282	human	ensembl	74_37	+1	putative	missense	c.770	p.R257Q	0.000	NULL	pfam_Marvel	-	no_errors	SYNGR2	HGNC	ENSG00000108639	tier1	-	-	36	0	0.00	28	16	36.36
TBX2	0	genome.wustl.edu	37	17	59486690	59486690	+	RNA	SNP	A	A	G			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	17	59486690	59486690	A	G	SNP	TBX2	ENST00000586986	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.546	-	-	-	no_errors	TBX2	HGNC	ENSG00000121068	tier1	-	-	26	0	0.00	21	7	25.00
TDRKH	0	genome.wustl.edu	37	1	151748932	151748932	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	151748932	151748932	G	T	SNP	TDRKH	ENST00000368822	human	ensembl	74_37	-1	known	missense	c.1027	p.H343N	0.984	pfam_Tudor	pfam_KH_dom_type_1,pfam_Tudor,smart_KH_dom,smart_Tudor,pfscan_Tudor,pfscan_KH_dom_type_1	-	no_errors	TDRKH	HGNC	ENSG00000182134	tier1	-	-	39	0	0.00	33	18	35.29
TGFBR2	0	genome.wustl.edu	37	3	30732976	30732976	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	3	30732976	30732976	C	T	SNP	TGFBR2	ENST00000359013	human	ensembl	74_37	+1	known	missense	c.1664	p.T555I	1.000	pirsf_Transform_growth_fac-b_typ-2,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_TGFB_receptor,pfscan_Prot_kinase_dom	-	no_errors	TGFBR2	HGNC	ENSG00000163513	tier1	-	-	50	0	0.00	29	22	43.14
TMEM150C	0	genome.wustl.edu	37	4	83406788	83406788	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	4	83406788	83406788	C	T	SNP	TMEM150C	ENST00000449862	human	ensembl	74_37	-1	known	missense	c.626	p.G209D	1.000	pfam_Frag1/DRAM/Sfk1	pfam_Frag1/DRAM/Sfk1	-	no_errors	TMEM150C	HGNC	ENSG00000249242	tier1	-	-	40	0	0.00	51	4	7.27
TMEM252	0	genome.wustl.edu	37	9	71155464	71155464	+	Silent	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	9	71155464	71155464	G	A	SNP	TMEM252	ENST00000377311	human	ensembl	74_37	-1	known	silent	c.267	p.A89	0.150	NULL	NULL	-	no_errors	TMEM252	HGNC	ENSG00000181778	tier1	-	-	21	0	0.00	14	7	33.33
TMEM63B	0	genome.wustl.edu	37	6	44102778	44102778	+	Missense_Mutation	SNP	C	C	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	6	44102778	44102778	C	A	SNP	TMEM63B	ENST00000259746	human	ensembl	74_37	+1	known	missense	c.184	p.L62I	1.000	NULL	pfam_DUF221	-	no_errors	TMEM63B	HGNC	ENSG00000137216	tier1	-	-	29	0	0.00	36	4	10.00
TPP1	0	genome.wustl.edu	37	11	6640117	6640117	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	6640117	6640117	C	T	SNP	TPP1	ENST00000299427	human	ensembl	74_37	-1	known	missense	c.119	p.R40H	1.000	pfam_Peptidase_S53_propep,superfamily_Prot_inh_propept,smart_Peptidase_S53_propep	pfam_Peptidase_S53_propep,pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom,superfamily_Prot_inh_propept,smart_Peptidase_S53_propep	-	no_errors	TPP1	HGNC	ENSG00000166340				26	0	0.00	38	3	7.32
TRIM66	0	genome.wustl.edu	37	11	8662484	8662484	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	8662484	8662484	G	T	SNP	TRIM66	ENST00000299550	human	ensembl	74_37	-1	known	missense	c.1003	p.Q335K	1.000	NULL	pfam_Bromodomain,pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_B-box,smart_Znf_PHD,smart_Bbox_C,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	TRIM66	HGNC	ENSG00000166436	tier1	-	-	22	0	0.00	21	12	36.36
TTN	0	genome.wustl.edu	37	2	179504469	179504469	+	Silent	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	179504469	179504469	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.33129	p.P11043	0.015	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				51	0	0.00	71	4	5.33
UNC5A	0	genome.wustl.edu	37	5	176289624	176289624	+	Splice_Site	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	176289624	176289624	G	T	SNP	UNC5A	ENST00000329542	human	ensembl	74_37	+1	known	splice_site	c.71-1	e2-1	1.000	-	-	-	no_errors	UNC5A	HGNC	ENSG00000113763				40	0	0.00	42	3	6.67
VAX2	0	genome.wustl.edu	37	2	71160034	71160034	+	Silent	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	71160034	71160034	G	T	SNP	VAX2	ENST00000234392	human	ensembl	74_37	+1	known	silent	c.573	p.L191	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	VAX2	HGNC	ENSG00000116035	tier1	-	-	70	0	0.00	45	26	36.62
VGLL3	0	genome.wustl.edu	37	3	87027857	87027859	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	3	87027857	87027859	CTC	-	DEL	VGLL3	ENST00000398399	human	ensembl	74_37	-1	known	in_frame_del	c.222_220	p.E74in_frame_del	1.000:1.000:1.000	NULL	pfam_Vg_Tdu,smart_TDU_repeat	-	no_errors	VGLL3	HGNC	ENSG00000206538	tier1			36	0	0.00	29	5	14.71
VPS13D	0	genome.wustl.edu	37	1	12401921	12401921	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	12401921	12401921	C	T	SNP	VPS13D	ENST00000358136	human	ensembl	74_37	+1	known	missense	c.8711	p.T2904I	1.000	NULL	pfam_VPSAP_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	VPS13D	HGNC	ENSG00000048707	tier1	-	-	56	0	0.00	58	5	7.94
VWA5A	0	genome.wustl.edu	37	11	123989240	123989240	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	123989240	123989240	G	T	SNP	VWA5A	ENST00000392748	human	ensembl	74_37	+1	known	missense	c.470	p.G157V	0.029	NULL	pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA5A	HGNC	ENSG00000110002				21	0	0.00	56	3	5.08
VWDE	0	genome.wustl.edu	37	7	12410039	12410039	+	Silent	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	7	12410039	12410039	C	T	SNP	VWDE	ENST00000452576	human	ensembl	74_37	-1	known	silent	c.1893	p.A631	0.000	NULL	pfam_VWF_type-D,superfamily_Cadherin-like,smart_VWF_type-D,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	VWDE	HGNC	ENSG00000146530				21	0	0.00	20	2	9.09
WARS2	0	genome.wustl.edu	37	1	119683180	119683180	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	119683180	119683180	G	T	SNP	WARS2	ENST00000235521	human	ensembl	74_37	-1	known	missense	c.88	p.Q30K	0.962	NULL	pfam_aa-tRNA-synth_Ic,prints_Trp-tRNA-ligase,tigrfam_Trp-tRNA-ligase	-	no_errors	WARS2	HGNC	ENSG00000116874	tier1	-	-	25	0	0.00	29	4	12.12
WDR17	0	genome.wustl.edu	37	4	177052812	177052812	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	4	177052812	177052812	G	A	SNP	WDR17	ENST00000280190	human	ensembl	74_37	+1	known	missense	c.1093	p.A365T	0.994	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR17	HGNC	ENSG00000150627				55	0	0.00	57	3	5.00
WDR41	0	genome.wustl.edu	37	5	76721825	76721825	+	RNA	SNP	A	A	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	76721825	76721825	A	T	SNP	WDR41	ENST00000514878	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.007	-	-	-	no_errors	WDR41	HGNC	ENSG00000164253	tier1	-	-	26	0	0.00	24	19	44.19
WHSC1	0	genome.wustl.edu	37	4	1954887	1954887	+	Silent	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	4	1954887	1954887	C	T	SNP	WHSC1	ENST00000382888	human	ensembl	74_37	+1	known	silent	c.18	p.C6	0.042	NULL	pfam_SET_dom,pfam_PWWP_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_PWWP_dom,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	WHSC1	HGNC	ENSG00000109685	tier1	-	-	48	0	0.00	50	4	7.41
WWP2	0	genome.wustl.edu	37	16	69974083	69974083	+	RNA	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	16	69974083	69974083	G	A	SNP	WWP2	ENST00000569297	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.178	-	-	-	no_errors	WWP2	HGNC	ENSG00000198373	tier1	-	-	30	0	0.00	27	8	22.86
XRRA1	0	genome.wustl.edu	37	11	74559456	74559456	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	11	74559456	74559456	G	A	SNP	XRRA1	ENST00000340360	human	ensembl	74_37	-1	known	missense	c.1408	p.P470S	0.001	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	XRRA1	HGNC	ENSG00000166435	tier1	-	-	29	0	0.00	24	12	33.33
ZBTB9	0	genome.wustl.edu	37	6	33423364	33423364	+	Missense_Mutation	SNP	A	A	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	6	33423364	33423364	A	T	SNP	ZBTB9	ENST00000395064	human	ensembl	74_37	+1	known	missense	c.487	p.T163S	0.001	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB9	HGNC	ENSG00000213588				36	0	0.00	69	5	6.76
ZC3H12A	0	genome.wustl.edu	37	1	37947279	37947279	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	1	37947279	37947279	G	T	SNP	ZC3H12A	ENST00000373087	human	ensembl	74_37	+1	known	missense	c.661	p.V221L	0.998	pfam_RNase_Zc3h12	pfam_RNase_Zc3h12	-	no_errors	ZC3H12A	HGNC	ENSG00000163874	tier1	-	-	50	0	0.00	25	21	45.65
ZC3H6	0	genome.wustl.edu	37	2	113074098	113074098	+	Nonsense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	2	113074098	113074098	C	T	SNP	ZC3H6	ENST00000343936	human	ensembl	74_37	+1	known	nonsense	c.799	p.Q267*	1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H6	HGNC	ENSG00000188177	tier1	-	-	42	0	0.00	74	4	5.13
ZFP41	0	genome.wustl.edu	37	8	144332542	144332542	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	8	144332542	144332542	G	T	SNP	ZFP41	ENST00000330701	human	ensembl	74_37	+1	known	missense	c.529	p.G177W	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP41	HGNC	ENSG00000181638				44	0	0.00	50	3	5.66
ZKSCAN2	0	genome.wustl.edu	37	16	25251911	25251911	+	Silent	SNP	T	T	C			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	16	25251911	25251911	T	C	SNP	ZKSCAN2	ENST00000328086	human	ensembl	74_37	-1	known	silent	c.2130	p.S710	0.890	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN2	HGNC	ENSG00000155592	tier1	-	-	39	0	0.00	51	4	7.27
ZNF134	0	genome.wustl.edu	37	19	58132263	58132263	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	58132263	58132263	C	T	SNP	ZNF134	ENST00000396161	human	ensembl	74_37	+1	known	missense	c.776	p.P259L	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF134	HGNC	ENSG00000213762	tier1	-	-	29	0	0.00	28	15	34.88
ZNF30	0	genome.wustl.edu	37	19	35434868	35434868	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	35434868	35434868	G	A	SNP	ZNF30	ENST00000303586	human	ensembl	74_37	+1	known	missense	c.1001	p.R334Q	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF30	HGNC	ENSG00000168661	tier1	-	-	48	0	0.00	60	4	6.25
ZNF333	0	genome.wustl.edu	37	19	14817559	14817559	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	14817559	14817559	G	A	SNP	ZNF333	ENST00000292530	human	ensembl	74_37	+1	known	missense	c.485	p.R162H	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,smart_Znf_BED_prd,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF333	HGNC	ENSG00000160961	tier1	-	-	31	0	0.00	30	4	11.76
ZNF335	0	genome.wustl.edu	37	20	44578137	44578137	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	20	44578137	44578137	C	T	SNP	ZNF335	ENST00000322927	human	ensembl	74_37	-1	known	missense	c.3740	p.G1247D	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF335	HGNC	ENSG00000198026	tier1	-	-	38	0	0.00	47	4	7.84
ZNF581	0	genome.wustl.edu	37	19	56156448	56156448	+	Missense_Mutation	SNP	C	C	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	56156448	56156448	C	T	SNP	ZNF581	ENST00000270451	human	ensembl	74_37	+1	known	missense	c.511	p.R171C	0.993	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF581	HGNC	ENSG00000171425	tier1	-	-	80	0	0.00	79	30	27.52
ZNF608	0	genome.wustl.edu	37	5	124080411	124080411	+	Missense_Mutation	SNP	G	G	A			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	5	124080411	124080411	G	A	SNP	ZNF608	ENST00000306315	human	ensembl	74_37	-1	known	missense	c.272	p.S91F	1.000	NULL	NULL	-	no_errors	ZNF608	HGNC	ENSG00000168916	tier1	-	-	52	0	0.00	40	21	34.43
ZNF667	0	genome.wustl.edu	37	19	56952917	56952917	+	Silent	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	19	56952917	56952917	G	T	SNP	ZNF667	ENST00000342634	human	ensembl	74_37	-1	known	silent	c.1831	p.R611	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF667	HGNC	ENSG00000198046	tier1	-	-	36	0	0.00	46	19	28.79
ZSCAN31	0	genome.wustl.edu	37	6	28294059	28294059	+	Missense_Mutation	SNP	G	G	T			TCGA-JY-A93F-01A-21D-A37C-09	TCGA-JY-A93F-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	def53512-fa87-4775-8ed4-9c1ceaea2a3d	09ac5fc9-0dc3-4174-87ac-5207067025d0	6	28294059	28294059	G	T	SNP	ZSCAN31	ENST00000344279	human	ensembl	74_37	-1	known	missense	c.1105	p.H369N	0.847	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN31	HGNC	ENSG00000235109				24	0	0.00	52	3	5.45
