Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ACVRL1	0	genome.wustl.edu	37	12	52307360	52307360	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	12	52307360	52307360	G	A	SNP	ACVRL1	ENST00000550683	human	ensembl	74_37	+1	known	missense	c.373	p.E125K	0.738	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVRL1	HGNC	ENSG00000139567				16	0	0.00	21	4	16.00
ADAM12	0	genome.wustl.edu	37	10	127782586	127782586	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	10	127782586	127782586	C	A	SNP	ADAM12	ENST00000368679	human	ensembl	74_37	-1	known	missense	c.1122	p.E374D	0.722	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM12	HGNC	ENSG00000148848	tier1	-	-	81	0	0.00	80	13	13.98
ADAM28	0	genome.wustl.edu	37	8	24181395	24181395	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	8	24181395	24181395	T	C	SNP	ADAM28	ENST00000265769	human	ensembl	74_37	+1	known	missense	c.769	p.W257R	1.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM28	HGNC	ENSG00000042980	tier1	-	-	34	0	0.00	50	11	18.03
ADAMTS10	0	genome.wustl.edu	37	19	8651466	8651466	+	Silent	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	8651466	8651466	C	A	SNP	ADAMTS10	ENST00000270328	human	ensembl	74_37	-1	known	silent	c.2379	p.P793	0.429	pfam_ADAM_spacer1	pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS10	HGNC	ENSG00000142303	tier1	-	-	46	0	0.00	46	14	23.33
ADAMTS16	0	genome.wustl.edu	37	5	5318251	5318251	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	5318251	5318251	C	T	SNP	ADAMTS16	ENST00000274181	human	ensembl	74_37	+1	known	missense	c.3416	p.T1139M	0.998	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS16	HGNC	ENSG00000145536				20	0	0.00	28	5	15.15
ADCY1	0	genome.wustl.edu	37	7	45753493	45753493	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	7	45753493	45753493	C	-	DEL	ADCY1	ENST00000297323	human	ensembl	74_37	+1	known	frame_shift_del	c.3259	p.V1089fs	0.993	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY1	HGNC	ENSG00000164742	tier1			58	0	0.00	60	11	15.49
ADCY10	0	genome.wustl.edu	37	1	167844397	167844397	+	Silent	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	167844397	167844397	G	A	SNP	ADCY10	ENST00000367851	human	ensembl	74_37	-1	known	silent	c.1434	p.C478	0.850	superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10	pfam_A/G_cyclase,superfamily_A/G_cyclase,superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase	-	no_errors	ADCY10	HGNC	ENSG00000143199	tier1	-	-	37	0	0.00	35	7	16.28
ADRA2A	0	genome.wustl.edu	37	10	112838931	112838931	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	10	112838931	112838931	G	T	SNP	ADRA2A	ENST00000280155	human	ensembl	74_37	+1	known	missense	c.1177	p.V393L	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRA2A_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam,prints_Musac_Ach_rcpt	-	no_errors	ADRA2A	HGNC	ENSG00000150594				33	0	0.00	27	2	6.90
AFF1	0	genome.wustl.edu	37	4	88035615	88035615	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	4	88035615	88035615	C	T	SNP	AFF1	ENST00000395146	human	ensembl	74_37	+1	known	missense	c.1630	p.P544S	0.099	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF1	HGNC	ENSG00000172493	tier1	-	-	15	0	0.00	11	7	38.89
AGAP11	0	genome.wustl.edu	37	10	88760457	88760457	+	RNA	DEL	T	T	-			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	10	88760457	88760457	T	-	DEL	AGAP11	ENST00000444431	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	AGAP11	HGNC	ENSG00000151303	tier1			27	0	0.00	20	4	16.67
ALDH3A2	0	genome.wustl.edu	37	17	19568349	19568349	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	17	19568349	19568349	T	A	SNP	ALDH3A2	ENST00000339618	human	ensembl	74_37	+1	known	missense	c.1196	p.F399Y	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	-	no_errors	ALDH3A2	HGNC	ENSG00000072210	tier1	-	-	58	0	0.00	81	10	10.99
ANGPT4	0	genome.wustl.edu	37	20	865893	865893	+	Silent	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	20	865893	865893	C	T	SNP	ANGPT4	ENST00000381922	human	ensembl	74_37	-1	known	silent	c.663	p.A221	0.770	NULL	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPT4	HGNC	ENSG00000101280	tier1	-	-	20	0	0.00	24	6	20.00
ANKRD30B	0	genome.wustl.edu	37	18	14808688	14808688	+	RNA	SNP	A	A	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	18	14808688	14808688	A	C	SNP	ANKRD30B	ENST00000579292	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	ANKRD30B	HGNC	ENSG00000180777	tier1	-	-	75	0	0.00	64	11	14.67
ANKRD36	0	genome.wustl.edu	37	2	97847489	97847489	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	97847489	97847489	A	G	SNP	ANKRD36	ENST00000420699	human	ensembl	74_37	+1	known	missense	c.1796	p.N599S	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD36	HGNC	ENSG00000135976	tier1	-	-	93	0	0.00	128	15	10.49
ANP32B	0	genome.wustl.edu	37	9	100745866	100745866	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	9	100745866	100745866	A	G	SNP	ANP32B	ENST00000339399	human	ensembl	74_37	+1	known	missense	c.29	p.E10G	1.000	NULL	smart_U2A'_phosphoprotein32A_C	-	no_errors	ANP32B	HGNC	ENSG00000136938				43	0	0.00	70	4	5.41
ANP32BP1	0	genome.wustl.edu	37	15	75614576	75614576	+	RNA	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	15	75614576	75614576	C	T	SNP	ANP32BP1	ENST00000564205	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ANP32BP1	HGNC	ENSG00000259790	tier1	-	-	56	0	0.00	88	24	21.43
ANP32BP1	0	genome.wustl.edu	37	15	75614593	75614593	+	RNA	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	15	75614593	75614593	C	T	SNP	ANP32BP1	ENST00000564205	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ANP32BP1	HGNC	ENSG00000259790	tier1	-	-	60	0	0.00	99	26	20.80
ANP32BP1	0	genome.wustl.edu	37	15	75614671	75614671	+	RNA	SNP	A	A	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	15	75614671	75614671	A	G	SNP	ANP32BP1	ENST00000564205	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.964	-	-	-	no_errors	ANP32BP1	HGNC	ENSG00000259790	tier1	-	-	45	0	0.00	107	25	18.94
ANP32BP1	0	genome.wustl.edu	37	15	75614710	75614710	+	RNA	SNP	A	A	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	15	75614710	75614710	A	G	SNP	ANP32BP1	ENST00000564205	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	ANP32BP1	HGNC	ENSG00000259790	tier1	-	-	50	0	0.00	101	17	14.41
ATP11C	0	genome.wustl.edu	37	X	138856967	138856967	+	Silent	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	X	138856967	138856967	G	A	SNP	ATP11C	ENST00000327569	human	ensembl	74_37	-1	known	silent	c.2107	p.L703	1.000	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP11C	HGNC	ENSG00000101974	tier1	-	-	49	0	0.00	30	15	33.33
ATP8A1	0	genome.wustl.edu	37	4	42445670	42445670	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	4	42445670	42445670	C	T	SNP	ATP8A1	ENST00000381668	human	ensembl	74_37	-1	known	nonsense	c.3035	p.W1012*	1.000	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8A1	HGNC	ENSG00000124406	tier1	-	-	36	0	0.00	45	10	18.18
BBS1	0	genome.wustl.edu	37	11	66283014	66283014	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	11	66283014	66283014	C	T	SNP	BBS1	ENST00000419755	human	ensembl	74_37	+1	known	nonsense	c.547	p.R183*	0.993	NULL	superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	CTD-3074O7.11	Clone_based_vega_gene	ENSG00000256349	tier1	-	-	16	0	0.00	33	8	19.51
BBS4	0	genome.wustl.edu	37	15	72978628	72978628	+	Silent	SNP	A	A	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	15	72978628	72978628	A	T	SNP	BBS4	ENST00000562084	human	ensembl	74_37	+1	known	silent	c.60	p.A20	0.000	NULL	NULL	-	no_errors	BBS4	HGNC	ENSG00000140463	tier1	-	-	80	0	0.00	98	19	16.24
BEND7	0	genome.wustl.edu	37	10	13542011	13542011	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	10	13542011	13542011	C	T	SNP	BEND7	ENST00000396900	human	ensembl	74_37	-1	known	missense	c.215	p.R72Q	1.000	NULL	pfam_BEN_domain	-	no_errors	BEND7	HGNC	ENSG00000165626	tier1	-	-	47	0	0.00	80	14	14.89
BRD4	0	genome.wustl.edu	37	19	15350513	15350513	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	15350513	15350513	G	-	DEL	BRD4	ENST00000263377	human	ensembl	74_37	-1	known	frame_shift_del	c.3402	p.K1135fs	0.995	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD4	HGNC	ENSG00000141867	tier1			31	0	0.00	29	2	6.45
BRINP3	0	genome.wustl.edu	37	1	190423854	190423854	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	190423854	190423854	C	T	SNP	BRINP3	ENST00000367462	human	ensembl	74_37	-1	known	missense	c.167	p.R56H	1.000	pfam_MACPF	pfam_MACPF,smart_MACPF	-	no_errors	BRINP3	HGNC	ENSG00000162670				24	0	0.00	37	3	7.50
BTBD18	0	genome.wustl.edu	37	11	57511628	57511628	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	11	57511628	57511628	G	T	SNP	BTBD18	ENST00000422652	human	ensembl	74_37	-1	known	missense	c.2117	p.T706K	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	BTBD18	HGNC	ENSG00000233436	tier1	-	-	39	0	0.00	46	4	8.00
C12orf55	0	genome.wustl.edu	37	12	97038038	97038038	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	12	97038038	97038038	A	G	SNP	C12orf55	ENST00000524981	human	ensembl	74_37	+1	putative	missense	c.4399	p.R1467G	0.194	NULL	superfamily_Fibronectin_type3	-	no_errors	C12orf55	HGNC	ENSG00000188596	tier1	-	-	32	0	0.00	39	9	18.75
C16orf74	0	genome.wustl.edu	37	16	85743840	85743840	+	Silent	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	16	85743840	85743840	G	A	SNP	C16orf74	ENST00000284245	human	ensembl	74_37	-1	known	silent	c.102	p.D34	0.976	NULL	NULL	-	no_errors	C16orf74	HGNC	ENSG00000154102	tier1	-	-	21	0	0.00	18	8	30.77
C1orf140	0	genome.wustl.edu	37	1	221507307	221507307	+	RNA	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	221507307	221507307	G	A	SNP	C1orf140	ENST00000434398	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-421L10.1	Clone_based_vega_gene	ENSG00000234754	tier1	-	-	65	0	0.00	69	27	28.12
CACNA1B	0	genome.wustl.edu	37	9	141000233	141000233	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	9	141000233	141000233	C	T	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	missense	c.5405	p.T1802M	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408	tier1	-	-	30	0	0.00	46	9	16.36
CACNA1S	0	genome.wustl.edu	37	1	201021764	201021764	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	201021764	201021764	T	C	SNP	CACNA1S	ENST00000362061	human	ensembl	74_37	-1	known	missense	c.3874	p.I1292V	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su,prints_VDCC_L_a1ssu	-	no_errors	CACNA1S	HGNC	ENSG00000081248	tier1	-	-	47	0	0.00	69	6	8.00
CARTPT	0	genome.wustl.edu	37	5	71015223	71015223	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	71015223	71015223	C	T	SNP	CARTPT	ENST00000296777	human	ensembl	74_37	+1	known	missense	c.103	p.P35S	1.000	pfam_CART	pfam_CART,superfamily_CART	-	no_errors	CARTPT	HGNC	ENSG00000164326	tier1	-	-	54	0	0.00	52	5	8.77
CBLN1	0	genome.wustl.edu	37	16	49315306	49315306	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	16	49315306	49315306	T	G	SNP	CBLN1	ENST00000219197	human	ensembl	74_37	-1	known	missense	c.71	p.E24A	1.000	NULL	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CBLN1	HGNC	ENSG00000102924				40	0	0.00	23	3	11.11
CCDC102B	0	genome.wustl.edu	37	18	66564837	66564837	+	RNA	SNP	T	T	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	18	66564837	66564837	T	C	SNP	CCDC102B	ENST00000577772	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.090	-	-	-	no_errors	CCDC102B	HGNC	ENSG00000150636	tier1	-	-	36	0	0.00	30	10	25.00
CCDC85A	0	genome.wustl.edu	37	2	56420101	56420101	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	56420101	56420101	C	T	SNP	CCDC85A	ENST00000407595	human	ensembl	74_37	+1	known	missense	c.766	p.P256S	1.000	NULL	pfam_DUF2216_coiled-coil	-	no_errors	CCDC85A	HGNC	ENSG00000055813	tier1	-	-	45	0	0.00	45	12	21.05
CDH5	0	genome.wustl.edu	37	16	66426223	66426225	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	16	66426223	66426225	AGA	-	DEL	CDH5	ENST00000341529	human	ensembl	74_37	+1	known	in_frame_del	c.1154_1156	p.K387in_frame_del	0.004:0.089:0.738	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH5	HGNC	ENSG00000179776	tier1			21	0	0.00	12	5	29.41
CDK11B	0	genome.wustl.edu	37	1	1575747	1575747	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	1575747	1575747	C	G	SNP	CDK11B	ENST00000407249	human	ensembl	74_37	-1	known	missense	c.1151	p.G384A	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK11B	HGNC	ENSG00000248333				88	0	0.00	85	9	9.57
CENPL	0	genome.wustl.edu	37	1	173776414	173776414	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	173776414	173776414	A	T	SNP	CENPL	ENST00000356198	human	ensembl	74_37	-1	known	missense	c.411	p.F137L	1.000	NULL	NULL	-	no_errors	CENPL	HGNC	ENSG00000120334	tier1	-	-	65	0	0.00	64	21	24.71
CKS2	0	genome.wustl.edu	37	9	91930118	91930118	+	Silent	SNP	A	A	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	9	91930118	91930118	A	G	SNP	CKS2	ENST00000314355	human	ensembl	74_37	+1	known	silent	c.93	p.Q31	1.000	pfam_Cyclin-dep_kinase_reg-sub,superfamily_Cyclin-dep_kinase_reg-sub,prints_Cyclin-dep_kinase_reg-sub	pfam_Cyclin-dep_kinase_reg-sub,superfamily_Cyclin-dep_kinase_reg-sub,prints_Cyclin-dep_kinase_reg-sub	-	no_errors	CKS2	HGNC	ENSG00000123975	tier1	-	-	43	0	0.00	59	8	11.94
CLASP1	0	genome.wustl.edu	37	2	122104699	122104699	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	122104699	122104699	T	G	SNP	CLASP1	ENST00000263710	human	ensembl	74_37	-1	known	missense	c.4445	p.K1482T	1.000	pfam_HEAT,superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP1	HGNC	ENSG00000074054	tier1	-	-	42	0	0.00	50	6	10.71
CLEC9A	0	genome.wustl.edu	37	12	10205421	10205421	+	RNA	DEL	T	T	-			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	12	10205421	10205421	T	-	DEL	CLEC9A	ENST00000544751	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CLEC9A	HGNC	ENSG00000197992	tier1			25	0	0.00	18	4	18.18
CMYA5	0	genome.wustl.edu	37	5	79025231	79025231	+	Silent	SNP	T	T	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	79025231	79025231	T	C	SNP	CMYA5	ENST00000446378	human	ensembl	74_37	+1	known	silent	c.643	p.L215	0.069	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309	tier1	-	-	31	0	0.00	35	9	20.45
CNTN6	0	genome.wustl.edu	37	3	1214937	1214937	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	3	1214937	1214937	C	T	SNP	CNTN6	ENST00000394261	human	ensembl	74_37	+1	known	missense	c.94	p.L32F	0.052	NULL	NULL	-	no_errors	CNTN6	HGNC	ENSG00000134115	tier1	-	-	37	0	0.00	52	6	10.34
COG6	0	genome.wustl.edu	37	13	40261650	40261650	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	13	40261650	40261650	G	T	SNP	COG6	ENST00000455146	human	ensembl	74_37	+1	known	missense	c.799	p.D267Y	1.000	pfam_COG6	pfam_COG6	-	no_errors	COG6	HGNC	ENSG00000133103				26	0	0.00	49	4	7.55
COL21A1	0	genome.wustl.edu	37	6	56029249	56029249	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	6	56029249	56029249	G	A	SNP	COL21A1	ENST00000244728	human	ensembl	74_37	-1	known	missense	c.1343	p.P448L	0.996	NULL	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL21A1	HGNC	ENSG00000124749	tier1	-	-	34	0	0.00	27	5	15.62
COL6A3	0	genome.wustl.edu	37	2	238275737	238275737	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	238275737	238275737	G	A	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	missense	c.5093	p.T1698I	0.963	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359	tier1	-	-	56	0	0.00	71	13	15.48
COL6A3	0	genome.wustl.edu	37	2	238289897	238289897	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	238289897	238289897	C	T	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	missense	c.1558	p.G520S	0.998	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359	tier1	-	-	41	0	0.00	33	4	10.81
CORO7-PAM16	0	genome.wustl.edu	37	16	4412735	4412735	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	16	4412735	4412735	C	T	SNP	CORO7-PAM16	ENST00000572467	human	ensembl	74_37	-1	known	missense	c.1280	p.G427D	1.000	NULL	pfam_DUF1900,pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO7-PAM16	HGNC	ENSG00000103426	tier1	-	-	38	0	0.00	21	12	36.36
CPA5	0	genome.wustl.edu	37	7	130007803	130007803	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	7	130007803	130007803	C	A	SNP	CPA5	ENST00000355388	human	ensembl	74_37	+1	known	nonsense	c.1095	p.Y365*	1.000	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA5	HGNC	ENSG00000158525	tier1	-	-	52	0	0.00	41	16	28.07
CPD	0	genome.wustl.edu	37	17	28791735	28791735	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	17	28791735	28791735	G	A	SNP	CPD	ENST00000225719	human	ensembl	74_37	+1	known	missense	c.4046	p.R1349H	1.000	NULL	pfam_Peptidase_M14,superfamily_CarboxyPept-like_regulatory,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPD	HGNC	ENSG00000108582				23	0	0.00	35	3	7.89
CPQ	0	genome.wustl.edu	37	8	97797153	97797153	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	8	97797153	97797153	G	T	SNP	CPQ	ENST00000220763	human	ensembl	74_37	+1	known	missense	c.28	p.G10C	0.002	NULL	pfam_Peptidase_M28,pfam_Peptidase_M20	-	no_errors	CPQ	HGNC	ENSG00000104324				23	0	0.00	34	2	5.56
DCDC1	0	genome.wustl.edu	37	11	31327826	31327826	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	11	31327826	31327826	C	A	SNP	DCDC1	ENST00000452803	human	ensembl	74_37	-1	known	nonsense	c.544	p.G182*	1.000	pfscan_Doublecortin_dom	pfscan_Doublecortin_dom	-	no_errors	DCDC1	HGNC	ENSG00000170959	tier1	-	-	24	0	0.00	32	10	23.81
DENND2A	0	genome.wustl.edu	37	7	140301551	140301551	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	7	140301551	140301551	C	T	SNP	DENND2A	ENST00000275884	human	ensembl	74_37	-1	known	missense	c.647	p.R216K	0.001	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND2A	HGNC	ENSG00000146966	tier1	-	-	27	0	0.00	34	5	12.82
DISC1	0	genome.wustl.edu	37	1	231830164	231830164	+	Silent	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	231830164	231830164	C	T	SNP	DISC1	ENST00000439617	human	ensembl	74_37	+1	known	silent	c.660	p.A220	0.214	NULL	superfamily_Prefoldin	-	no_errors	DISC1	HGNC	ENSG00000162946	tier1	-	-	28	0	0.00	19	5	20.83
DNASE1L3	0	genome.wustl.edu	37	3	58179028	58179028	+	Silent	SNP	T	T	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	3	58179028	58179028	T	C	SNP	DNASE1L3	ENST00000483681	human	ensembl	74_37	-1	putative	silent	c.843	p.K281	0.000	NULL	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_DNase_I,pirsf_DNase_I,prints_DNase_I	-	no_errors	DNASE1L3	HGNC	ENSG00000163687				28	0	0.00	34	3	8.11
DNMT3A	0	genome.wustl.edu	37	2	25462040	25462040	+	Silent	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	25462040	25462040	G	A	SNP	DNMT3A	ENST00000264709	human	ensembl	74_37	-1	known	silent	c.2367	p.H789	1.000	NULL	pfam_PWWP_dom,pfam_C5_MeTfrase,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	DNMT3A	HGNC	ENSG00000119772	tier1	-	-	38	0	0.00	44	11	20.00
DOCK3	0	genome.wustl.edu	37	3	51352528	51352528	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	3	51352528	51352528	G	T	SNP	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	missense	c.3371	p.W1124L	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538	tier1	-	-	20	0	0.00	30	7	18.92
DOCK3	0	genome.wustl.edu	37	3	51352437	51352437	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	3	51352437	51352437	G	T	SNP	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	nonsense	c.3280	p.G1094*	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538				12	0	0.00	26	2	7.14
DOCK8	0	genome.wustl.edu	37	9	428369	428369	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	9	428369	428369	C	T	SNP	DOCK8	ENST00000453981	human	ensembl	74_37	+1	known	missense	c.4346	p.S1449L	0.977	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_DOCK_C/D_N,superfamily_ARM-type_fold	-	no_errors	DOCK8	HGNC	ENSG00000107099	tier1	-	-	84	0	0.00	59	26	30.23
DPPA3	0	genome.wustl.edu	37	12	7869565	7869565	+	Silent	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	12	7869565	7869565	G	A	SNP	DPPA3	ENST00000345088	human	ensembl	74_37	+1	known	silent	c.372	p.K124	0.001	NULL	NULL	-	no_errors	DPPA3	HGNC	ENSG00000187569	tier1	-	-	31	0	0.00	51	7	12.07
ELMO1	0	genome.wustl.edu	37	7	37264526	37264526	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	7	37264526	37264526	G	A	SNP	ELMO1	ENST00000310758	human	ensembl	74_37	-1	known	missense	c.659	p.A220V	1.000	pfam_DUF3361,superfamily_ARM-type_fold	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO1	HGNC	ENSG00000155849	tier1	-	-	60	0	0.00	40	12	23.08
ENSG00000216085	0	genome.wustl.edu	37	7	107677352	107677352	+	RNA	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	7	107677352	107677352	G	A	SNP	ENSG00000216085	ENST00000401266	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	AC005048.1	Clone_based_ensembl_gene	ENSG00000216085	tier1	-	-	19	0	0.00	20	7	25.93
ENSG00000225411	0	genome.wustl.edu	37	9	68400246	68400246	+	RNA	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	9	68400246	68400246	C	T	SNP	ENSG00000225411	ENST00000417843	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP11-764K9.1	Clone_based_vega_gene	ENSG00000225411	tier1	rs74763289	-	14	0	0.00	4	5	55.56
EPHB2	0	genome.wustl.edu	37	1	23189635	23189635	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	23189635	23189635	G	A	SNP	EPHB2	ENST00000400191	human	ensembl	74_37	+1	known	missense	c.917	p.R306H	1.000	pirsf_Tyr_kinase_ephrin_rcpt,superfamily_Growth_fac_rcpt_N_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHB2	HGNC	ENSG00000133216	tier1	-	-	59	0	0.00	66	17	20.48
ERBB4	0	genome.wustl.edu	37	2	212288964	212288964	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	212288964	212288964	C	A	SNP	ERBB4	ENST00000342788	human	ensembl	74_37	-1	known	nonsense	c.2782	p.E928*	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB4	HGNC	ENSG00000178568	tier1	-	-	52	0	0.00	70	4	5.41
ESPL1	0	genome.wustl.edu	37	12	53685797	53685797	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	12	53685797	53685797	G	A	SNP	ESPL1	ENST00000257934	human	ensembl	74_37	+1	known	missense	c.5721	p.M1907I	0.952	pfam_Peptidase_C50	pfam_Peptidase_C50,superfamily_DsrEFH-like	-	no_errors	ESPL1	HGNC	ENSG00000135476	tier1	-	-	30	0	0.00	45	5	10.00
FAM138B	0	genome.wustl.edu	37	2	114335612	114335612	+	RNA	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	114335612	114335612	G	A	SNP	FAM138B	ENST00000432583	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	FAM138B	HGNC	ENSG00000226516	tier1	-	-	47	0	0.00	41	9	18.00
FAM166B	0	genome.wustl.edu	37	9	35562675	35562677	+	In_Frame_Del	DEL	TCA	TCA	-			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	TCA	TCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	9	35562675	35562677	TCA	-	DEL	FAM166B	ENST00000447837	human	ensembl	74_37	-1	known	in_frame_del	c.515_513	p.D172in_frame_del	0.999:1.000:1.000	NULL	pfam_UPF0573/UPF0605	-	no_errors	FAM166B	HGNC	ENSG00000215187	tier1			30	0	0.00	31	2	6.06
FAM26D	0	genome.wustl.edu	37	6	116875427	116875427	+	Silent	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	6	116875427	116875427	G	A	SNP	FAM26D	ENST00000368596	human	ensembl	74_37	+1	known	silent	c.471	p.L157	0.783	NULL	NULL	-	no_errors	FAM26D	HGNC	ENSG00000164451				30	0	0.00	43	3	6.52
FBN1	0	genome.wustl.edu	37	15	48712961	48712961	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	15	48712961	48712961	C	A	SNP	FBN1	ENST00000316623	human	ensembl	74_37	-1	known	missense	c.7742	p.C2581F	1.000	pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_FBN,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN1	HGNC	ENSG00000166147	tier1	-	-	15	0	0.00	19	4	17.39
FCRL3	0	genome.wustl.edu	37	1	157665905	157665905	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	157665905	157665905	C	T	SNP	FCRL3	ENST00000492769	human	ensembl	74_37	-1	known	missense	c.1057	p.A353T	0.000	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL3	HGNC	ENSG00000160856	tier1	-	-	36	0	0.00	27	14	34.15
FIZ1	0	genome.wustl.edu	37	19	56104860	56104860	+	Silent	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	56104860	56104860	C	T	SNP	FIZ1	ENST00000221665	human	ensembl	74_37	-1	known	silent	c.447	p.A149	0.071	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	FIZ1	HGNC	ENSG00000179943	tier1	-	-	47	0	0.00	42	13	23.64
FLYWCH1	0	genome.wustl.edu	37	16	2998732	2998732	+	RNA	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	16	2998732	2998732	G	A	SNP	FLYWCH1	ENST00000570752	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FLYWCH1	HGNC	ENSG00000059122	tier1	-	-	49	0	0.00	57	20	25.97
FOPNL	0	genome.wustl.edu	37	16	15961369	15961369	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	16	15961369	15961369	G	T	SNP	FOPNL	ENST00000255759	human	ensembl	74_37	-1	known	missense	c.453	p.D151E	0.000	NULL	pfam_FOP_dimerisation-dom_N,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	FOPNL	HGNC	ENSG00000133393				27	0	0.00	38	2	5.00
FRMD6	0	genome.wustl.edu	37	14	52194517	52194517	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	14	52194517	52194517	G	T	SNP	FRMD6	ENST00000344768	human	ensembl	74_37	+1	known	missense	c.1639	p.D547Y	1.000	NULL	pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	-	no_errors	FRMD6	HGNC	ENSG00000139926	tier1	-	-	40	0	0.00	55	6	9.84
FSIP1	0	genome.wustl.edu	37	15	40057884	40057884	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	15	40057884	40057884	A	G	SNP	FSIP1	ENST00000350221	human	ensembl	74_37	-1	known	missense	c.374	p.L125P	1.000	NULL	NULL	-	no_errors	FSIP1	HGNC	ENSG00000150667	tier1	-	-	86	0	0.00	125	35	21.88
FZD2	0	genome.wustl.edu	37	17	42635995	42635995	+	Silent	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	17	42635995	42635995	C	T	SNP	FZD2	ENST00000315323	human	ensembl	74_37	+1	known	silent	c.939	p.D313	1.000	pfam_Frizzled,pfscan_GPCR_2-like	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD2	HGNC	ENSG00000180340	tier1	-	-	51	0	0.00	61	13	17.57
GABRA1	0	genome.wustl.edu	37	5	161292738	161292738	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	161292738	161292738	G	A	SNP	GABRA1	ENST00000023897	human	ensembl	74_37	+1	known	missense	c.199	p.E67K	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_GABAAa_rcpt,prints_GABBAg_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa1_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA1	HGNC	ENSG00000022355	tier1	-	-	20	0	0.00	25	13	34.21
GALNT10	0	genome.wustl.edu	37	5	153674404	153674404	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	153674404	153674404	T	G	SNP	GALNT10	ENST00000297107	human	ensembl	74_37	+1	known	missense	c.188	p.F63C	0.002	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT10	HGNC	ENSG00000164574	tier1	-	-	38	0	0.00	66	6	8.33
GOLGA8DP	0	genome.wustl.edu	37	15	22709212	22709212	+	RNA	SNP	G	G	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	15	22709212	22709212	G	C	SNP	GOLGA8DP	ENST00000314246	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.425	-	-	-	no_errors	GOLGA8DP	HGNC	ENSG00000185182	tier1	-	-	110	0	0.00	112	31	21.68
GOLGA8T	0	genome.wustl.edu	37	15	30433079	30433079	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	15	30433079	30433079	A	C	SNP	GOLGA8T	ENST00000569052	human	ensembl	74_37	+1	novel	missense	c.626	p.K209T	0.003	NULL	NULL	-	no_errors	GOLGA8T	HGNC	ENSG00000261247	tier1	-	-	100	0	0.00	162	47	22.49
GORASP1	0	genome.wustl.edu	37	3	39140516	39140516	+	RNA	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	3	39140516	39140516	C	T	SNP	GORASP1	ENST00000476334	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	GORASP1	HGNC	ENSG00000114745	tier1	-	-	19	0	0.00	27	6	18.18
GPAT2	0	genome.wustl.edu	37	2	96689748	96689748	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	96689748	96689748	G	A	SNP	GPAT2	ENST00000359548	human	ensembl	74_37	-1	known	missense	c.1819	p.P607S	1.000	NULL	smart_Plipid/glycerol_acylTrfase	-	no_errors	GPAT2	HGNC	ENSG00000186281	tier1	-	-	52	0	0.00	39	11	22.00
GPR139	0	genome.wustl.edu	37	16	20043988	20043988	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	16	20043988	20043988	T	G	SNP	GPR139	ENST00000570682	human	ensembl	74_37	-1	known	missense	c.131	p.N44T	1.000	prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR139	HGNC	ENSG00000180269				21	0	0.00	24	3	11.11
GPR158	0	genome.wustl.edu	37	10	25890514	25890514	+	RNA	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	10	25890514	25890514	C	T	SNP	GPR158	ENST00000490549	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.989	-	-	-	no_errors	GPR158	HGNC	ENSG00000151025	tier1	-	-	21	0	0.00	31	8	20.51
GRIK2	0	genome.wustl.edu	37	6	102376297	102376297	+	Silent	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	6	102376297	102376297	G	A	SNP	GRIK2	ENST00000421544	human	ensembl	74_37	+1	known	silent	c.1875	p.E625	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK2	HGNC	ENSG00000164418	tier1	-	-	66	0	0.00	56	7	10.94
GRIK5	0	genome.wustl.edu	37	19	42507533	42507533	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	42507533	42507533	G	A	SNP	GRIK5	ENST00000301218	human	ensembl	74_37	-1	known	missense	c.2465	p.A822V	1.000	prints_NMDA_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK5	HGNC	ENSG00000105737	tier1	-	-	40	0	0.00	45	15	25.00
HAUS5	0	genome.wustl.edu	37	19	36110964	36110964	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	36110964	36110964	C	T	SNP	HAUS5	ENST00000203166	human	ensembl	74_37	+1	known	missense	c.1457	p.A486V	0.000	NULL	NULL	-	no_errors	HAUS5	HGNC	ENSG00000249115	tier1	-	-	59	0	0.00	70	11	13.58
HECW2	0	genome.wustl.edu	37	2	197080605	197080605	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	197080605	197080605	T	-	DEL	HECW2	ENST00000260983	human	ensembl	74_37	-1	known	frame_shift_del	c.4591	p.I1531fs	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	HECW2	HGNC	ENSG00000138411	tier1			23	0	0.00	40	9	18.37
HGFAC	0	genome.wustl.edu	37	4	3446081	3446081	+	Silent	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	4	3446081	3446081	C	T	SNP	HGFAC	ENST00000382774	human	ensembl	74_37	+1	known	silent	c.642	p.G214	0.342	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Fibronectin_type1,smart_Fibronectin_type1,pfscan_Fibronectin_type1	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EG-like_dom,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGFAC	HGNC	ENSG00000109758	tier1	-	-	34	0	0.00	16	4	20.00
HSPG2	0	genome.wustl.edu	37	1	22155399	22155399	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	22155399	22155399	C	G	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.12166	p.G4056R	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798	tier1	-	-	55	0	0.00	58	6	9.38
HTR4	0	genome.wustl.edu	37	5	147863838	147863838	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	147863838	147863838	C	T	SNP	HTR4	ENST00000360693	human	ensembl	74_37	-1	known	missense	c.1181	p.R394K	0.007	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_5HT4_rcpt,prints_GPCR_Rhodpsn	-	no_errors	HTR4	HGNC	ENSG00000164270				17	0	0.00	30	5	14.29
IDH2	0	genome.wustl.edu	37	15	90631934	90631934	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	15	90631934	90631934	C	T	SNP	IDH2	ENST00000330062	human	ensembl	74_37	-1	known	missense	c.419	p.R140Q	1.000	pfam_IsoPropMal-DH-like_dom,pirsf_Isocitrate_DH_NADP,tigrfam_Isocitrate_DH_NADP	pfam_IsoPropMal-DH-like_dom,pirsf_Isocitrate_DH_NADP,tigrfam_Isocitrate_DH_NADP	-	no_errors	IDH2	HGNC	ENSG00000182054	tier1	rs121913502	-	35	0	0.00	60	4	6.25
ING2	0	genome.wustl.edu	37	4	184431438	184431438	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	4	184431438	184431438	C	T	SNP	ING2	ENST00000302327	human	ensembl	74_37	+1	known	missense	c.176	p.T59M	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	ING2	HGNC	ENSG00000168556	tier1	-	-	9	0	0.00	15	4	21.05
INTS10	0	genome.wustl.edu	37	8	19701701	19701701	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	8	19701701	19701701	T	A	SNP	INTS10	ENST00000397977	human	ensembl	74_37	+1	known	missense	c.1834	p.C612S	1.000	NULL	NULL	-	no_errors	INTS10	HGNC	ENSG00000104613				29	0	0.00	29	6	17.14
IQCF3	0	genome.wustl.edu	37	3	51863720	51863720	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	3	51863720	51863720	C	T	SNP	IQCF3	ENST00000437810	human	ensembl	74_37	+1	known	missense	c.58	p.R20W	0.000	superfamily_P-loop_NTPase	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCF3	HGNC	ENSG00000229972	tier1	-	-	30	0	0.00	18	4	18.18
IRAK2	0	genome.wustl.edu	37	3	10255052	10255052	+	Silent	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	3	10255052	10255052	C	T	SNP	IRAK2	ENST00000256458	human	ensembl	74_37	+1	known	silent	c.690	p.H230	0.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,superfamily_Kinase-like_dom,superfamily_DEATH-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	IRAK2	HGNC	ENSG00000134070	tier1	-	-	26	0	0.00	34	7	17.07
IRGC	0	genome.wustl.edu	37	19	44223001	44223001	+	Silent	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	44223001	44223001	G	A	SNP	IRGC	ENST00000244314	human	ensembl	74_37	+1	known	silent	c.291	p.S97	0.000	pfam_Interferon-induced_GTPase,superfamily_P-loop_NTPase	pfam_Interferon-induced_GTPase,superfamily_P-loop_NTPase	-	no_errors	IRGC	HGNC	ENSG00000124449	tier1	rs11555892	-	75	0	0.00	90	15	14.29
JARID2	0	genome.wustl.edu	37	6	15513155	15513155	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	6	15513155	15513155	C	T	SNP	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	missense	c.3145	p.R1049C	1.000	NULL	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083	tier1	-	-	14	0	0.00	28	7	20.00
KCNC3	0	genome.wustl.edu	37	19	50826653	50826653	+	Silent	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	50826653	50826653	G	A	SNP	KCNC3	ENST00000477616	human	ensembl	74_37	-1	known	silent	c.1557	p.V519	0.943	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_K_chnl_volt-dep_Kv3_ID,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3.3,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC3	HGNC	ENSG00000131398	tier1	rs200349179	-	61	0	0.00	51	17	25.00
KCTD16	0	genome.wustl.edu	37	5	143853531	143853531	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	143853531	143853531	A	-	DEL	KCTD16	ENST00000507359	human	ensembl	74_37	+1	known	frame_shift_del	c.1141	p.A384fs	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD16	HGNC	ENSG00000183775	tier1			13	0	0.00	17	4	19.05
KDM2B	0	genome.wustl.edu	37	12	121951164	121951164	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	12	121951164	121951164	G	T	SNP	KDM2B	ENST00000377071	human	ensembl	74_37	-1	known	nonsense	c.1089	p.C363*	1.000	NULL	pfam_Znf_CXXC,pfam_F-box_dom,pfam_JmjC_dom,superfamily_Znf_FYVE_PHD,smart_JmjC_dom,smart_Znf_PHD,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KDM2B	HGNC	ENSG00000089094				47	0	0.00	67	4	5.63
KDR	0	genome.wustl.edu	37	4	55971000	55971000	+	Silent	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	4	55971000	55971000	G	T	SNP	KDR	ENST00000263923	human	ensembl	74_37	-1	known	silent	c.1797	p.P599	0.541	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR2_rcpt	-	no_errors	KDR	HGNC	ENSG00000128052				26	0	0.00	42	3	6.67
KIAA1755	0	genome.wustl.edu	37	20	36841848	36841848	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	20	36841848	36841848	G	A	SNP	KIAA1755	ENST00000279024	human	ensembl	74_37	-1	known	missense	c.3199	p.R1067C	0.000	NULL	superfamily_CRAL-TRIO_dom	-	no_errors	KIAA1755	HGNC	ENSG00000149633	tier1	-	-	79	0	0.00	67	18	20.69
KLF7	0	genome.wustl.edu	37	2	207988664	207988664	+	Silent	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	207988664	207988664	C	T	SNP	KLF7	ENST00000309446	human	ensembl	74_37	-1	known	silent	c.567	p.T189	0.001	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF7	HGNC	ENSG00000118263	tier1	-	-	38	0	0.00	40	11	21.57
KMT2C	0	genome.wustl.edu	37	7	151884535	151884536	+	Frame_Shift_Ins	INS	-	-	TT			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	7	151884535	151884536	-	TT	INS	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	frame_shift_ins	c.4820_4819	p.M1607fs	0.421:0.324	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609	tier1			97	0	0.00	104	38	26.76
KRT25	0	genome.wustl.edu	37	17	38906735	38906735	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	17	38906735	38906735	C	T	SNP	KRT25	ENST00000312150	human	ensembl	74_37	-1	known	missense	c.1072	p.E358K	1.000	pfam_IF,prints_Keratin_I	pfam_IF,prints_Keratin_I	-	no_errors	KRT25	HGNC	ENSG00000204897	tier1	-	-	62	0	0.00	94	6	5.94
KSR2	0	genome.wustl.edu	37	12	118293271	118293271	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	12	118293271	118293271	T	C	SNP	KSR2	ENST00000339824	human	ensembl	74_37	-1	known	missense	c.434	p.N145S	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	KSR2	HGNC	ENSG00000171435	tier1	-	-	38	0	0.00	40	8	16.67
LAMA1	0	genome.wustl.edu	37	18	7043225	7043225	+	Splice_Site	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	18	7043225	7043225	C	T	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	splice_site	c.1155+1	e8+1	1.000	-	-	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	42	0	0.00	68	15	18.07
LAMA3	0	genome.wustl.edu	37	18	21399944	21399944	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	18	21399944	21399944	C	A	SNP	LAMA3	ENST00000313654	human	ensembl	74_37	+1	known	missense	c.2287	p.Q763K	1.000	NULL	pfam_EGF_laminin,pfam_Laminin_G,pfam_Laminin_I,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Growth_fac_rcpt_N_dom,superfamily_Galactose-bd-like,superfamily_STAT_TF_coiled-coil,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA3	HGNC	ENSG00000053747	tier1	-	-	22	0	0.00	42	14	25.00
LGR6	0	genome.wustl.edu	37	1	202245467	202245467	+	Silent	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	202245467	202245467	G	A	SNP	LGR6	ENST00000367278	human	ensembl	74_37	+1	known	silent	c.462	p.P154	0.959	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn	-	no_errors	LGR6	HGNC	ENSG00000133067				26	0	0.00	37	2	5.13
LOC399715	0	genome.wustl.edu	37	10	6371111	6371111	+	RNA	SNP	T	T	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	10	6371111	6371111	T	G	SNP	LOC399715	ENST00000399868	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-563J2.2	Clone_based_vega_gene	ENSG00000215244	tier1	-	-	12	0	0.00	12	4	25.00
LRIT1	0	genome.wustl.edu	37	10	85991794	85991794	+	Silent	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	10	85991794	85991794	C	A	SNP	LRIT1	ENST00000372105	human	ensembl	74_37	-1	known	silent	c.1761	p.L587	0.196	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRIT1	HGNC	ENSG00000148602	tier1	-	-	35	0	0.00	21	4	16.00
LRRC63	0	genome.wustl.edu	37	13	46850816	46850816	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	13	46850816	46850816	C	A	SNP	LRRC63	ENST00000595396	human	ensembl	74_37	+1	novel	missense	c.1642	p.P548T	0.997	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC63	HGNC	ENSG00000173988	tier1	-	-	45	0	0.00	55	14	20.29
MAP1B	0	genome.wustl.edu	37	5	71403400	71403400	+	Silent	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	71403400	71403400	C	T	SNP	MAP1B	ENST00000296755	human	ensembl	74_37	+1	known	silent	c.42	p.S14	0.987	NULL	pfam_MAP1B_neuraxin	-	no_errors	MAP1B	HGNC	ENSG00000131711	tier1	-	-	29	0	0.00	23	6	20.69
MAPK6	0	genome.wustl.edu	37	15	52342251	52342251	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	15	52342251	52342251	C	T	SNP	MAPK6	ENST00000261845	human	ensembl	74_37	+1	known	missense	c.617	p.P206L	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_ERK3/4	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_ERK3/4	-	no_errors	MAPK6	HGNC	ENSG00000069956	tier1	-	-	37	0	0.00	65	11	14.47
MAST1	0	genome.wustl.edu	37	19	12969475	12969475	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	12969475	12969475	G	A	SNP	MAST1	ENST00000251472	human	ensembl	74_37	+1	known	missense	c.1288	p.E430K	0.998	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST1	HGNC	ENSG00000105613	tier1	-	-	68	0	0.00	76	11	12.64
MBTD1	0	genome.wustl.edu	37	17	49270861	49270861	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	17	49270861	49270861	T	G	SNP	MBTD1	ENST00000415868	human	ensembl	74_37	-1	known	missense	c.1383	p.K461N	1.000	pfam_Mbt	pfam_Mbt,smart_Mbt,pfscan_Mbt,pfscan_Znf_FCS	-	no_errors	MBTD1	HGNC	ENSG00000011258	tier1	-	-	21	0	0.00	39	7	14.89
MCF2L	0	genome.wustl.edu	37	13	113714953	113714953	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	13	113714953	113714953	C	T	SNP	MCF2L	ENST00000375604	human	ensembl	74_37	+1	known	missense	c.587	p.T196M	0.967	superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	pfam_DH-domain,pfam_Spectrin_repeat,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	MCF2L	HGNC	ENSG00000126217				15	0	0.00	23	4	14.81
MED1	0	genome.wustl.edu	37	17	37566445	37566445	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	17	37566445	37566445	G	A	SNP	MED1	ENST00000300651	human	ensembl	74_37	-1	known	missense	c.2029	p.R677C	1.000	NULL	pfam_Mediator_Med1_met/fun	-	no_errors	MED1	HGNC	ENSG00000125686	tier1	-	-	26	0	0.00	27	8	22.86
MIR361	0	genome.wustl.edu	37	X	85158642	85158642	+	RNA	SNP	A	A	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	X	85158642	85158642	A	G	SNP	MIR361	ENST00000362181	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR361	HGNC	ENSG00000199051	tier1	-	-	33	0	0.00	37	19	33.93
MIR548A3	0	genome.wustl.edu	37	8	105496666	105496666	+	RNA	SNP	T	T	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	8	105496666	105496666	T	G	SNP	MIR548A3	ENST00000385297	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.311	-	-	-	no_errors	MIR548A3	HGNC	ENSG00000208032	tier1	-	-	22	0	0.00	29	5	14.71
MIR548I4	0	genome.wustl.edu	37	X	83480784	83480784	+	RNA	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	X	83480784	83480784	G	A	SNP	MIR548I4	ENST00000408567	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MIR548I4	HGNC	ENSG00000221494	tier1	-	-	19	0	0.00	21	15	41.67
MS4A7	0	genome.wustl.edu	37	11	60152619	60152619	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	11	60152619	60152619	C	A	SNP	MS4A7	ENST00000300184	human	ensembl	74_37	+1	known	missense	c.206	p.A69D	0.018	pfam_CD20-like	pfam_CD20-like	-	no_errors	MS4A7	HGNC	ENSG00000166927				62	0	0.00	72	4	5.26
MSTN	0	genome.wustl.edu	37	2	190922360	190922360	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	190922360	190922360	G	T	SNP	MSTN	ENST00000260950	human	ensembl	74_37	-1	known	missense	c.752	p.P251Q	1.000	pfam_TGF-b_N	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	MSTN	HGNC	ENSG00000138379				21	0	0.00	26	4	13.33
MT-ND5	0	genome.wustl.edu	37	MT	12801	12801	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	MT	12801	12801	C	A	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.465	p.I155M	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1	-	-	248	0	0.00	9	2	18.18
MTO1	0	genome.wustl.edu	37	6	74190435	74190435	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	6	74190435	74190435	G	T	SNP	MTO1	ENST00000415954	human	ensembl	74_37	+1	known	missense	c.1167	p.Q389H	1.000	pfam_GIDA-rel,tigrfam_GidA	pfam_GIDA-rel,pfam_FAD_bind_dom,prints_FAD_pyr_nucl-diS_OxRdtase,tigrfam_GidA	-	no_errors	MTO1	HGNC	ENSG00000135297				92	0	0.00	75	4	5.06
MUC17	0	genome.wustl.edu	37	7	100693828	100693828	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	7	100693828	100693828	G	T	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.12786	p.K4262N	0.000	pfam_SEA_dom,smart_SEA_dom	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876				22	0	0.00	71	4	5.33
MYO6	0	genome.wustl.edu	37	6	76599857	76599858	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	6	76599857	76599858	-	A	INS	MYO6	ENST00000369981	human	ensembl	74_37	+1	known	frame_shift_ins	c.2742_2743	p.Q917fs	1.000:1.000	NULL	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO6	HGNC	ENSG00000196586	tier1			10	0	0.00	13	2	13.33
MYOF	0	genome.wustl.edu	37	10	95097551	95097551	+	RNA	SNP	T	T	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	10	95097551	95097551	T	A	SNP	MYOF	ENST00000475358	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.096	-	-	-	no_errors	MYOF	HGNC	ENSG00000138119	tier1	-	-	49	0	0.00	61	7	10.29
NBEAL2	0	genome.wustl.edu	37	3	47037271	47037271	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	3	47037271	47037271	G	T	SNP	NBEAL2	ENST00000450053	human	ensembl	74_37	+1	known	missense	c.1966	p.V656L	1.000	superfamily_ConA-like_lec_gl_sf	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL2	HGNC	ENSG00000160796	tier1	-	-	50	0	0.00	75	6	7.41
NFKBID	0	genome.wustl.edu	37	19	36387329	36387329	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	36387329	36387329	C	T	SNP	NFKBID	ENST00000352614	human	ensembl	74_37	-1	known	missense	c.826	p.V276M	0.708	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	NFKBID	HGNC	ENSG00000167604	tier1	-	-	51	0	0.00	69	24	25.81
NLGN1	0	genome.wustl.edu	37	3	173996722	173996722	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	3	173996722	173996722	A	C	SNP	NLGN1	ENST00000401917	human	ensembl	74_37	+1	known	missense	c.1051	p.K351Q	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN1	HGNC	ENSG00000169760	tier1	-	-	31	0	0.00	23	8	25.81
NMUR2	0	genome.wustl.edu	37	5	151775087	151775087	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	151775087	151775087	G	T	SNP	NMUR2	ENST00000255262	human	ensembl	74_37	-1	known	missense	c.870	p.F290L	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NeuromedU_rcpt_2,prints_NeuromedU_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NeuromedU_rcpt_2,prints_NeuromedU_rcpt,prints_GPCR_Rhodpsn	-	no_errors	NMUR2	HGNC	ENSG00000132911	tier1	-	-	32	0	0.00	49	4	7.55
NOC4L	0	genome.wustl.edu	37	12	132632280	132632280	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	12	132632280	132632280	C	A	SNP	NOC4L	ENST00000330579	human	ensembl	74_37	+1	known	missense	c.556	p.Q186K	0.999	superfamily_ARM-type_fold	pfam_CCAAT-binding_factor,superfamily_ARM-type_fold	-	no_errors	NOC4L	HGNC	ENSG00000184967				47	0	0.00	56	3	5.08
NPBWR1	0	genome.wustl.edu	37	8	53852892	53852892	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	8	53852892	53852892	C	T	SNP	NPBWR1	ENST00000331251	human	ensembl	74_37	+1	known	missense	c.425	p.A142V	0.930	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Neuropept_B/W_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Neuropept_B/W_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_Opioid_rcpt	-	no_errors	NPBWR1	HGNC	ENSG00000183729	tier1	-	-	60	0	0.00	92	19	17.12
NR2C1	0	genome.wustl.edu	37	12	95434294	95434294	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	12	95434294	95434294	G	T	SNP	NR2C1	ENST00000333003	human	ensembl	74_37	-1	known	nonsense	c.1211	p.S404*	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt	-	no_errors	NR2C1	HGNC	ENSG00000120798				40	0	0.00	57	4	6.56
NUP160	0	genome.wustl.edu	37	11	47869783	47869783	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	11	47869783	47869783	C	T	SNP	NUP160	ENST00000378460	human	ensembl	74_37	-1	known	missense	c.190	p.V64I	0.154	pfam_Nucleoporin_Nup160	pfam_Nucleoporin_Nup160	-	no_errors	NUP160	HGNC	ENSG00000030066	tier1	-	-	46	0	0.00	58	9	13.43
OBSL1	0	genome.wustl.edu	37	2	220432177	220432177	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	220432177	220432177	C	T	SNP	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	missense	c.1655	p.R552Q	0.991	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006	tier1	-	-	64	0	0.00	59	10	14.49
OGN	0	genome.wustl.edu	37	9	95152121	95152121	+	RNA	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	9	95152121	95152121	C	T	SNP	OGN	ENST00000468743	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	OGN	HGNC	ENSG00000106809	tier1	-	-	43	0	0.00	76	7	8.43
OR10H5	0	genome.wustl.edu	37	19	15904866	15904866	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	15904866	15904866	G	A	SNP	OR10H5	ENST00000308940	human	ensembl	74_37	+1	known	missense	c.8	p.G3E	0.001	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10H5	HGNC	ENSG00000172519	tier1	-	-	76	0	0.00	98	6	5.77
OR10Z1	0	genome.wustl.edu	37	1	158576428	158576428	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	158576428	158576428	C	T	SNP	OR10Z1	ENST00000361284	human	ensembl	74_37	+1	known	missense	c.200	p.S67F	0.233	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10Z1	HGNC	ENSG00000198967	tier1	-	-	81	0	0.00	137	12	8.05
OR2AJ1	0	genome.wustl.edu	37	1	248097435	248097435	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	248097435	248097435	G	T	SNP	OR2AJ1	ENST00000318244	human	ensembl	74_37	+1	known	missense	c.365	p.R122L	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2AJ1	HGNC	ENSG00000177275	tier1	-	-	76	0	0.00	81	16	16.49
OR4A16	0	genome.wustl.edu	37	11	55110731	55110731	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	11	55110731	55110731	C	A	SNP	OR4A16	ENST00000314721	human	ensembl	74_37	+1	known	missense	c.55	p.P19T	0.001	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A16	HGNC	ENSG00000181961	tier1	-	-	31	0	0.00	44	4	8.33
OR4A16	0	genome.wustl.edu	37	11	55110724	55110724	+	Silent	SNP	T	T	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	11	55110724	55110724	T	A	SNP	OR4A16	ENST00000314721	human	ensembl	74_37	+1	known	silent	c.48	p.T16	0.011	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A16	HGNC	ENSG00000181961				29	0	0.00	41	3	6.82
OR51M1	0	genome.wustl.edu	37	11	5411391	5411391	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	11	5411391	5411391	G	A	SNP	OR51M1	ENST00000328611	human	ensembl	74_37	+1	known	missense	c.763	p.A255T	0.028	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51M1	HGNC	ENSG00000184698	tier1	-	-	64	0	0.00	57	13	18.57
OR6N2	0	genome.wustl.edu	37	1	158746862	158746862	+	Silent	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	158746862	158746862	G	T	SNP	OR6N2	ENST00000339258	human	ensembl	74_37	-1	known	silent	c.564	p.A188	0.753	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6N2	HGNC	ENSG00000188340	tier1	-	-	13	0	0.00	29	8	21.62
PASD1	0	genome.wustl.edu	37	X	150840900	150840900	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	X	150840900	150840900	G	T	SNP	PASD1	ENST00000370357	human	ensembl	74_37	+1	known	missense	c.1683	p.E561D	0.000	NULL	superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PASD1	HGNC	ENSG00000166049				8	0	0.00	17	4	19.05
PCDH11X	0	genome.wustl.edu	37	X	91134272	91134272	+	Silent	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	X	91134272	91134272	G	A	SNP	PCDH11X	ENST00000373094	human	ensembl	74_37	+1	known	silent	c.3033	p.P1011	1.000	NULL	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11X	HGNC	ENSG00000102290	tier1	rs138111592	-	29	0	0.00	36	20	35.71
PCDH17	0	genome.wustl.edu	37	13	58207464	58207464	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	13	58207464	58207464	G	A	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	missense	c.784	p.V262I	0.975	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946	tier1	-	-	35	0	0.00	39	11	21.57
PCDHA12	0	genome.wustl.edu	37	5	140255185	140255185	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	140255185	140255185	C	T	SNP	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	missense	c.128	p.T43I	0.998	pfam_Cadherin_N,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664	tier1	-	-	80	0	0.00	77	13	14.44
PCDHA8	0	genome.wustl.edu	37	5	140220914	140220914	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	140220914	140220914	A	G	SNP	PCDHA8	ENST00000531613	human	ensembl	74_37	+1	known	missense	c.8	p.Y3C	0.001	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA8	HGNC	ENSG00000204962	tier1	-	-	53	0	0.00	55	9	14.06
PCDHA9	0	genome.wustl.edu	37	5	140229147	140229147	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	140229147	140229147	C	T	SNP	PCDHA9	ENST00000532602	human	ensembl	74_37	+1	known	missense	c.1067	p.S356L	0.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA9	HGNC	ENSG00000204961	tier1	-	-	51	0	0.00	68	19	21.84
PCNXL3	0	genome.wustl.edu	37	11	65402568	65402568	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	11	65402568	65402568	C	T	SNP	PCNXL3	ENST00000355703	human	ensembl	74_37	+1	known	missense	c.4930	p.R1644C	1.000	pfam_Pecanex	pfam_Pecanex	-	no_errors	PCNXL3	HGNC	ENSG00000197136	tier1	-	-	47	0	0.00	54	15	21.74
PDCD11	0	genome.wustl.edu	37	10	105178266	105178266	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	10	105178266	105178266	C	T	SNP	PDCD11	ENST00000369797	human	ensembl	74_37	+1	known	missense	c.1981	p.R661C	0.004	superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,pfscan_Rbsml_prot_S1_RNA-bd_dom	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Suf,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_HAT,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,prints_Ribosomal_S1	-	no_errors	PDCD11	HGNC	ENSG00000148843	tier1	-	-	73	0	0.00	71	17	19.32
PDE4DIP	0	genome.wustl.edu	37	1	144930990	144930990	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	144930990	144930990	G	A	SNP	PDE4DIP	ENST00000313431	human	ensembl	74_37	-1	known	missense	c.719	p.S240F	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	tier1	-	-	55	0	0.00	79	11	12.22
PKD1L2	0	genome.wustl.edu	37	16	81208261	81208261	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	16	81208261	81208261	G	A	SNP	PKD1L2	ENST00000527937	human	ensembl	74_37	-1	known	missense	c.610	p.R204W	0.000	pfscan_REJ-like	superfamily_Coatomer/clathrin_app_Ig-like,pfscan_REJ-like	-	no_errors	PKD1L2	HGNC	ENSG00000166473	tier1	rs200844830	-	29	0	0.00	36	8	18.18
PKDREJ	0	genome.wustl.edu	37	22	46653522	46653522	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	22	46653522	46653522	C	A	SNP	PKDREJ	ENST00000253255	human	ensembl	74_37	-1	known	nonsense	c.5698	p.E1900*	0.000	pfam_PKD1_2_channel	pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_Ion_trans_dom,superfamily_Lipase_LipOase,smart_GPS_dom,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,prints_PKD_2	-	no_errors	PKDREJ	HGNC	ENSG00000130943	tier1	-	-	39	0	0.00	56	6	9.68
PLCE1	0	genome.wustl.edu	37	10	96033382	96033382	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	10	96033382	96033382	A	G	SNP	PLCE1	ENST00000260766	human	ensembl	74_37	+1	known	missense	c.4570	p.M1524V	1.000	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom,prints_Pinositol_PLipase_C	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_Ras-assoc,pfam_RasGRF_CDC25,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_Ras_GEF_dom,superfamily_C2_dom,smart_RasGRF_CDC25,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,smart_Ras-assoc,pfscan_C2_dom,pfscan_Ras-assoc,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,pfscan_RasGRF_CDC25,prints_Pinositol_PLipase_C	-	no_errors	PLCE1	HGNC	ENSG00000138193	tier1	-	-	32	0	0.00	31	10	24.39
POLD1	0	genome.wustl.edu	37	19	50912814	50912814	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	50912814	50912814	G	A	SNP	POLD1	ENST00000440232	human	ensembl	74_37	+1	known	missense	c.2045	p.R682Q	1.000	pfam_DNA-dir_DNA_pol_B_multi_dom,smart_DNA-dir_DNA_pol_B,tigrfam_DNA-dir_DNA_pol_B_pol2	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B,tigrfam_DNA-dir_DNA_pol_B_pol2	-	no_errors	POLD1	HGNC	ENSG00000062822	tier1	-	-	43	0	0.00	58	7	10.77
POLRMT	0	genome.wustl.edu	37	19	621120	621120	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	621120	621120	G	A	SNP	POLRMT	ENST00000588649	human	ensembl	74_37	-1	known	missense	c.2578	p.R860C	0.981	pfam_DNA-dir_Rpol_phage-type	pfam_DNA-dir_Rpol_phage-type	-	no_errors	POLRMT	HGNC	ENSG00000099821	tier1	-	-	56	0	0.00	40	19	31.67
PRKCB	0	genome.wustl.edu	37	16	24192246	24192246	+	Silent	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	16	24192246	24192246	C	A	SNP	PRKCB	ENST00000303531	human	ensembl	74_37	+1	known	silent	c.1530	p.P510	0.009	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Protein_kinase_C_a/b/g,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_C2_dom	-	no_errors	PRKCB	HGNC	ENSG00000166501	tier1	-	-	56	0	0.00	65	14	17.72
PSG8	0	genome.wustl.edu	37	19	43257451	43257451	+	RNA	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	43257451	43257451	G	T	SNP	PSG8	ENST00000600709	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.049	-	-	-	no_errors	PSG8	HGNC	ENSG00000124467	tier1	-	-	55	0	0.00	73	19	20.65
PTCHD3	0	genome.wustl.edu	37	10	27687303	27687303	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	10	27687303	27687303	T	C	SNP	PTCHD3	ENST00000438700	human	ensembl	74_37	-1	known	missense	c.2224	p.N742D	0.000	NULL	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD3	HGNC	ENSG00000182077				24	0	0.00	54	4	6.90
PTCHD3	0	genome.wustl.edu	37	10	27702951	27702951	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	10	27702951	27702951	G	C	SNP	PTCHD3	ENST00000438700	human	ensembl	74_37	-1	known	missense	c.229	p.R77G	0.000	NULL	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD3	HGNC	ENSG00000182077				15	0	0.00	31	4	7.84
PXDN	0	genome.wustl.edu	37	2	1652754	1652754	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	1652754	1652754	C	T	SNP	PXDN	ENST00000252804	human	ensembl	74_37	-1	known	missense	c.2798	p.R933H	0.813	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDN	HGNC	ENSG00000130508	tier1	-	-	53	0	0.00	40	11	21.57
RAPH1	0	genome.wustl.edu	37	2	204354324	204354324	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	204354324	204354324	C	A	SNP	RAPH1	ENST00000374493	human	ensembl	74_37	-1	known	missense	c.715	p.G239W	1.000	NULL	pfam_Ras-assoc,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ras-assoc,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,prints_Paxillin	-	no_errors	RAPH1	HGNC	ENSG00000173166				30	0	0.00	30	2	6.25
RETSAT	0	genome.wustl.edu	37	2	85578038	85578038	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	85578038	85578038	G	T	SNP	RETSAT	ENST00000295802	human	ensembl	74_37	-1	known	missense	c.462	p.D154E	0.995	pfam_Amino_oxidase,pfam_FAD-dep_OxRdtase	pfam_Amino_oxidase,pfam_FAD_bind_dom,pfam_FAD-dep_OxRdtase,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_mOase_FAD-bd	-	no_errors	RETSAT	HGNC	ENSG00000042445	tier1	-	-	42	0	0.00	51	4	7.27
RGPD3	0	genome.wustl.edu	37	2	107084742	107084742	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	107084742	107084742	C	A	SNP	RGPD3	ENST00000304514	human	ensembl	74_37	-1	known	missense	c.3	p.M1I	0.996	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD3	HGNC	ENSG00000153165	tier1	-	-	137	0	0.00	138	9	6.12
RIMS2	0	genome.wustl.edu	37	8	105235993	105235993	+	Silent	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	8	105235993	105235993	C	T	SNP	RIMS2	ENST00000339750	human	ensembl	74_37	+1	known	silent	c.114	p.C38	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RIMS2	HGNC	ENSG00000176406	tier1	-	-	60	0	0.00	83	18	17.82
RP9P	0	genome.wustl.edu	37	7	32961042	32961042	+	RNA	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	7	32961042	32961042	C	T	SNP	RP9P	ENST00000381639	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP9P	HGNC	ENSG00000205763	tier1	-	-	54	0	0.00	58	13	18.31
RPL29	0	genome.wustl.edu	37	3	52027882	52027882	+	Silent	SNP	T	T	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	3	52027882	52027882	T	G	SNP	RPL29	ENST00000294189	human	ensembl	74_37	-1	known	silent	c.363	p.P121	0.998	NULL	pfam_Ribosomal_L29e	-	no_errors	RPL29	HGNC	ENSG00000162244				46	0	0.00	60	9	13.04
RPS26	0	genome.wustl.edu	37	12	56436329	56436329	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	12	56436329	56436329	C	T	SNP	RPS26	ENST00000356464	human	ensembl	74_37	+1	known	nonsense	c.124	p.R42*	1.000	pfam_Ribosomal_S26e	pfam_Ribosomal_S26e	-	no_errors	RPS26	HGNC	ENSG00000197728				61	0	0.00	89	10	10.10
RPS6KA6	0	genome.wustl.edu	37	X	83352797	83352797	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	X	83352797	83352797	A	C	SNP	RPS6KA6	ENST00000262752	human	ensembl	74_37	-1	known	missense	c.1836	p.F612L	0.999	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	-	no_errors	RPS6KA6	HGNC	ENSG00000072133	tier1	-	-	36	0	0.00	41	12	22.64
RTN1	0	genome.wustl.edu	37	14	60194227	60194227	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	14	60194227	60194227	G	T	SNP	RTN1	ENST00000267484	human	ensembl	74_37	-1	known	missense	c.1175	p.P392Q	0.487	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN1	HGNC	ENSG00000139970				30	0	0.00	55	3	5.17
RTN3	0	genome.wustl.edu	37	11	63487933	63487933	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	11	63487933	63487933	C	A	SNP	RTN3	ENST00000377819	human	ensembl	74_37	+1	known	missense	c.1959	p.D653E	0.997	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN3	HGNC	ENSG00000133318				22	0	0.00	31	3	8.82
SCNN1A	0	genome.wustl.edu	37	12	6457259	6457259	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	12	6457259	6457259	C	T	SNP	SCNN1A	ENST00000358945	human	ensembl	74_37	-1	known	missense	c.1856	p.R619Q	0.659	NULL	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	-	no_errors	SCNN1A	HGNC	ENSG00000111319				28	0	0.00	28	3	9.68
SDK1	0	genome.wustl.edu	37	7	4051852	4051852	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	7	4051852	4051852	G	A	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	missense	c.2405	p.R802H	0.079	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555	tier1	-	-	24	0	0.00	45	8	15.09
SETD1A	0	genome.wustl.edu	37	16	30976498	30976498	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	16	30976498	30976498	A	T	SNP	SETD1A	ENST00000262519	human	ensembl	74_37	+1	known	missense	c.1435	p.S479C	1.000	NULL	pfam_COMPASS_Set1_N-SET,pfam_SET_dom,pfam_RRM_dom,smart_RRM_dom,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_RRM_dom	-	no_errors	SETD1A	HGNC	ENSG00000099381	tier1	-	-	24	0	0.00	26	11	29.73
SGTA	0	genome.wustl.edu	37	19	2763650	2763650	+	Splice_Site	SNP	C	C	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	2763650	2763650	C	G	SNP	SGTA	ENST00000221566	human	ensembl	74_37	-1	known	splice_site	c.497+1	e5+1	1.000	-	-	-	no_errors	SGTA	HGNC	ENSG00000104969	tier1	-	-	53	0	0.00	40	7	14.89
SIDT2	0	genome.wustl.edu	37	11	117066610	117066610	+	Silent	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	11	117066610	117066610	C	T	SNP	SIDT2	ENST00000278951	human	ensembl	74_37	+1	known	silent	c.2478	p.I826	1.000	NULL	NULL	-	no_errors	SIDT2	HGNC	ENSG00000149577	tier1	-	-	60	0	0.00	66	6	8.33
SIRPB2	0	genome.wustl.edu	37	20	1460678	1460678	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	20	1460678	1460678	G	T	SNP	SIRPB2	ENST00000359801	human	ensembl	74_37	-1	known	missense	c.118	p.Q40K	0.535	pfam_Ig_V-set,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIRPB2	HGNC	ENSG00000196209	tier1	-	-	38	0	0.00	57	4	6.56
SKOR1	0	genome.wustl.edu	37	15	68119146	68119146	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	15	68119146	68119146	G	A	SNP	SKOR1	ENST00000380035	human	ensembl	74_37	+1	known	missense	c.980	p.R327H	0.870	NULL	pfam_Transform_Ski,pfam_c-SKI_SMAD4-bd_dom,superfamily_DNA-bd_dom_put,superfamily_SAND_dom-like	-	no_errors	SKOR1	HGNC	ENSG00000188779	tier1	-	-	21	0	0.00	6	5	45.45
SMCR5	0	genome.wustl.edu	37	17	17682235	17682235	+	RNA	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	17	17682235	17682235	G	T	SNP	SMCR5	ENST00000543475	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SMCR5	HGNC	ENSG00000226746	tier1	-	-	31	0	0.00	41	4	8.89
SOX13	0	genome.wustl.edu	37	1	204085774	204085774	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	204085774	204085774	G	T	SNP	SOX13	ENST00000367204	human	ensembl	74_37	+1	known	missense	c.558	p.Q186H	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX13	HGNC	ENSG00000143842				33	0	0.00	47	4	7.84
SPANXN3	0	genome.wustl.edu	37	X	142605168	142605168	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	X	142605168	142605168	C	T	SNP	SPANXN3	ENST00000370503	human	ensembl	74_37	-1	known	missense	c.52	p.E18K	0.000	pfam_SPANX_prot	pfam_SPANX_prot	-	no_errors	SPANXN3	HGNC	ENSG00000189252	tier1	-	-	49	0	0.00	40	33	45.21
SPATA5	0	genome.wustl.edu	37	4	124235172	124235172	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	4	124235172	124235172	C	A	SNP	SPATA5	ENST00000274008	human	ensembl	74_37	+1	known	missense	c.2635	p.R879S	0.996	superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase	-	no_errors	SPATA5	HGNC	ENSG00000145375				25	0	0.00	21	2	8.70
SPEM1	0	genome.wustl.edu	37	17	7324809	7324809	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	17	7324809	7324809	G	A	SNP	SPEM1	ENST00000323675	human	ensembl	74_37	+1	known	missense	c.815	p.R272Q	0.292	NULL	NULL	-	no_errors	SPEM1	HGNC	ENSG00000181323	tier1	-	-	28	0	0.00	40	13	24.53
SRBD1	0	genome.wustl.edu	37	2	45807093	45807093	+	Silent	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	45807093	45807093	G	T	SNP	SRBD1	ENST00000263736	human	ensembl	74_37	-1	known	silent	c.993	p.G331	1.000	pfam_Tex-like_N	pfam_Tex-like_N,pfam_Rbsml_prot_S1_RNA-bd_dom,superfamily_NA-bd_OB-fold,superfamily_RuvA_2-like,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SRBD1	HGNC	ENSG00000068784	tier1	-	-	35	0	0.00	27	4	12.90
SRP54	0	genome.wustl.edu	37	14	35482573	35482573	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	14	35482573	35482573	G	T	SNP	SRP54	ENST00000216774	human	ensembl	74_37	+1	known	missense	c.658	p.V220L	1.000	pfam_SRP54_GTPase_dom,pfam_CobW/HypB/UreG_dom,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_SRP54_GTPase_dom,tigrfam_SRP54_euk	pfam_SRP54_GTPase_dom,pfam_Signal_recog_particle_SRP54_M,pfam_Signal_recog_particl_SRP54_hlx,pfam_CobW/HypB/UreG_dom,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,superfamily_P-loop_NTPase,superfamily_Signal_recog_particle_SRP54_M,superfamily_Signal_recog_particl_SRP54_hlx,smart_Signal_recog_particl_SRP54_hlx,smart_AAA+_ATPase,smart_SRP54_GTPase_dom,tigrfam_SRP54_euk	-	no_errors	SRP54	HGNC	ENSG00000100883				43	0	0.00	73	4	5.19
SRSF2	0	genome.wustl.edu	37	17	74732959	74732959	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	17	74732959	74732959	G	A	SNP	SRSF2	ENST00000359995	human	ensembl	74_37	-1	known	missense	c.284	p.P95L	0.989	NULL	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SRSF2	HGNC	ENSG00000161547				25	0	0.00	24	5	17.24
STK38	0	genome.wustl.edu	37	6	36483172	36483172	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	6	36483172	36483172	G	T	SNP	STK38	ENST00000229812	human	ensembl	74_37	-1	known	missense	c.612	p.H204Q	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	STK38	HGNC	ENSG00000112079				44	0	0.00	50	3	5.66
STMND1	0	genome.wustl.edu	37	6	17115350	17115350	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	6	17115350	17115350	G	-	DEL	STMND1	ENST00000536551	human	ensembl	74_37	+1	known	frame_shift_del	c.239	p.R80fs	0.171	NULL	pfam_Stathmin_fam,superfamily_Stathmin_fam	-	no_errors	STMND1	HGNC	ENSG00000230873	tier1			33	0	0.00	26	5	16.13
SULF1	0	genome.wustl.edu	37	8	70501314	70501314	+	Silent	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	8	70501314	70501314	C	T	SNP	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	silent	c.672	p.P224	1.000	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573	tier1	-	-	28	0	0.00	45	11	19.64
SYCE1	0	genome.wustl.edu	37	10	135369520	135369520	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	10	135369520	135369520	G	A	SNP	SYCE1	ENST00000343131	human	ensembl	74_37	-1	known	missense	c.560	p.A187V	0.163	NULL	NULL	-	no_errors	SYCE1	HGNC	ENSG00000171772				63	0	0.00	71	4	5.33
TBX21	0	genome.wustl.edu	37	17	45819977	45819977	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	17	45819977	45819977	C	T	SNP	TBX21	ENST00000177694	human	ensembl	74_37	+1	known	missense	c.493	p.R165W	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX21	HGNC	ENSG00000073861	tier1	-	-	66	0	0.00	54	19	26.03
TCEAL4	0	genome.wustl.edu	37	X	102842229	102842229	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	X	102842229	102842229	T	C	SNP	TCEAL4	ENST00000372629	human	ensembl	74_37	+1	known	missense	c.1055	p.I352T	0.919	NULL	pfam_TF_A-like/BEX-like	-	no_errors	TCEAL4	HGNC	ENSG00000133142				16	0	0.00	53	6	10.17
TDRD15	0	genome.wustl.edu	37	2	21360430	21360430	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	21360430	21360430	T	C	SNP	TDRD15	ENST00000405799	human	ensembl	74_37	+1	novel	missense	c.91	p.F31L	1.000	pfam_Tudor	pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD15	HGNC	ENSG00000218819	tier1	-	-	25	0	0.00	34	5	12.82
TGS1	0	genome.wustl.edu	37	8	56699011	56699011	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	8	56699011	56699011	A	-	DEL	TGS1	ENST00000260129	human	ensembl	74_37	+1	known	frame_shift_del	c.554	p.N186fs	1.000	NULL	pfam_RNA_cap_Gua-N2-MeTrfase,pfam_RNA_methylase_dom,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	TGS1	HGNC	ENSG00000137574	tier1			26	0	0.00	34	2	5.56
TIFAB	0	genome.wustl.edu	37	5	134785568	134785568	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	134785568	134785568	G	A	SNP	TIFAB	ENST00000537858	human	ensembl	74_37	-1	known	missense	c.62	p.A21V	0.028	superfamily_SMAD_FHA_domain	pfam_FHA_dom,superfamily_SMAD_FHA_domain	-	no_errors	TIFAB	HGNC	ENSG00000255833	tier1	-	-	42	0	0.00	42	13	23.64
TLN1	0	genome.wustl.edu	37	9	35725661	35725661	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	9	35725661	35725661	C	T	SNP	TLN1	ENST00000314888	human	ensembl	74_37	-1	known	missense	c.31	p.G11R	1.000	NULL	pfam_Talin_cent,pfam_Vinculin-bd_dom,pfam_ILWEQ_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN1	HGNC	ENSG00000137076				20	0	0.00	23	3	11.54
TMTC1	0	genome.wustl.edu	37	12	29936515	29936515	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	12	29936515	29936515	A	G	SNP	TMTC1	ENST00000539277	human	ensembl	74_37	-1	putative	missense	c.170	p.I57T	1.000	NULL	pfam_TPR_1,pfam_TPR_2,pfam_DUF1736,pfam_PIK-rel_kinase_FAT,pfam_TPR-3,smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC1	HGNC	ENSG00000133687	tier1	-	-	59	0	0.00	77	13	14.44
TOX2	0	genome.wustl.edu	37	20	42695425	42695425	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	20	42695425	42695425	C	T	SNP	TOX2	ENST00000341197	human	ensembl	74_37	+1	known	missense	c.1412	p.P471L	0.927	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TOX2	HGNC	ENSG00000124191	tier1	-	-	60	0	0.00	53	16	23.19
TP53	0	genome.wustl.edu	37	17	7577548	7577548	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	17	7577548	7577548	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.733	p.G245S	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934575	-	61	0	0.00	70	22	23.91
TP53	0	genome.wustl.edu	37	17	7578406	7578406	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	17	7578406	7578406	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.524	p.R175H	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934578	-	27	0	0.00	26	8	23.53
TRIP4	0	genome.wustl.edu	37	15	64687622	64687622	+	Silent	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	15	64687622	64687622	C	T	SNP	TRIP4	ENST00000261884	human	ensembl	74_37	+1	known	silent	c.297	p.G99	0.973	NULL	pfam_ASCH_domain,pfam_Znf_C2HC5,superfamily_PUA-like_domain	-	no_errors	TRIP4	HGNC	ENSG00000103671				23	0	0.00	36	3	7.69
TRPV1	0	genome.wustl.edu	37	17	3493244	3493244	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	17	3493244	3493244	C	T	SNP	TRPV1	ENST00000399756	human	ensembl	74_37	-1	known	missense	c.901	p.D301N	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,tigrfam_TRP_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,tigrfam_TRP_channel	-	no_errors	TRPV1	HGNC	ENSG00000196689	tier1	-	-	52	0	0.00	47	15	24.19
TSSC1	0	genome.wustl.edu	37	2	3358353	3358353	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	3358353	3358353	C	A	SNP	TSSC1	ENST00000382125	human	ensembl	74_37	-1	known	missense	c.94	p.V32F	1.000	NULL	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TSSC1	HGNC	ENSG00000032389	tier1	-	-	42	0	0.00	64	22	25.58
TTC13	0	genome.wustl.edu	37	1	231076236	231076236	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	231076236	231076236	G	A	SNP	TTC13	ENST00000366661	human	ensembl	74_37	-1	known	missense	c.739	p.P247S	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC13	HGNC	ENSG00000143643	tier1	-	-	38	0	0.00	43	12	21.82
TTC13	0	genome.wustl.edu	37	1	231076237	231076237	+	Silent	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	1	231076237	231076237	C	T	SNP	TTC13	ENST00000366661	human	ensembl	74_37	-1	known	silent	c.738	p.Q246	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC13	HGNC	ENSG00000143643	tier1	-	-	38	0	0.00	44	11	20.00
TTLL4	0	genome.wustl.edu	37	2	219603750	219603750	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	2	219603750	219603750	G	A	SNP	TTLL4	ENST00000258398	human	ensembl	74_37	+1	known	missense	c.1351	p.A451T	0.018	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL4	HGNC	ENSG00000135912	tier1	-	-	37	0	0.00	63	6	8.70
TTYH1	0	genome.wustl.edu	37	19	54942051	54942051	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	54942051	54942051	C	T	SNP	TTYH1	ENST00000376531	human	ensembl	74_37	+1	known	nonsense	c.1000	p.R334*	0.999	pfam_Tweety	pfam_Tweety	-	no_errors	TTYH1	HGNC	ENSG00000167614	tier1	-	-	83	0	0.00	81	25	23.58
TUBBP5	0	genome.wustl.edu	37	9	141069223	141069223	+	RNA	SNP	T	T	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	9	141069223	141069223	T	C	SNP	TUBBP5	ENST00000503395	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	TUBBP5	HGNC	ENSG00000159247				28	0	0.00	32	4	11.11
TWISTNB	0	genome.wustl.edu	37	7	19739848	19739848	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	7	19739848	19739848	A	T	SNP	TWISTNB	ENST00000222567	human	ensembl	74_37	-1	known	missense	c.452	p.F151Y	1.000	NULL	pfam_RNA_pol_Rpb7_N	-	no_errors	TWISTNB	HGNC	ENSG00000105849				38	0	0.00	44	3	6.38
UBA5	0	genome.wustl.edu	37	3	132395299	132395299	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	3	132395299	132395299	G	T	SNP	UBA5	ENST00000356232	human	ensembl	74_37	+1	known	missense	c.1144	p.V382F	0.033	superfamily_Molybdenum_cofac_synth_MoeB	pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB	-	no_errors	UBA5	HGNC	ENSG00000081307	tier1	-	-	27	0	0.00	28	4	12.50
UNC93B1	0	genome.wustl.edu	37	11	67759287	67759287	+	Silent	SNP	C	C	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	11	67759287	67759287	C	A	SNP	UNC93B1	ENST00000227471	human	ensembl	74_37	-1	known	silent	c.1521	p.A507	0.000	NULL	pfam_Ion_channel_UNC-93,superfamily_MFS_dom_general_subst_transpt	-	no_errors	UNC93B1	HGNC	ENSG00000110057	tier1	-	-	20	0	0.00	23	5	17.86
UNKL	0	genome.wustl.edu	37	16	1416329	1416329	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	16	1416329	1416329	C	T	SNP	UNKL	ENST00000389221	human	ensembl	74_37	-1	known	missense	c.1955	p.R652Q	0.779	pfscan_Znf_RING	pfam_Znf_CCCH,smart_Znf_CCCH,pfscan_Znf_RING	-	no_errors	UNKL	HGNC	ENSG00000059145				41	0	0.00	21	3	12.50
USP28	0	genome.wustl.edu	37	11	113698017	113698017	+	Silent	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	11	113698017	113698017	G	A	SNP	USP28	ENST00000003302	human	ensembl	74_37	-1	known	silent	c.1125	p.S375	0.997	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,superfamily_UBA-like,pfscan_Peptidase_C19/C67	-	no_errors	USP28	HGNC	ENSG00000048028				24	0	0.00	30	2	6.25
VCAN	0	genome.wustl.edu	37	5	82837981	82837981	+	Silent	SNP	T	T	C			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	82837981	82837981	T	C	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	silent	c.9159	p.T3053	0.002	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427	tier1	-	-	21	0	0.00	39	8	17.02
VTI1A	0	genome.wustl.edu	37	10	114207157	114207157	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	10	114207157	114207157	A	G	SNP	VTI1A	ENST00000393077	human	ensembl	74_37	+1	known	missense	c.26	p.E9G	1.000	superfamily_t-SNARE	pfam_Vesicle_trsprt_v-SNARE_N,superfamily_t-SNARE,smart_T_SNARE_dom	-	no_errors	VTI1A	HGNC	ENSG00000151532	tier1	-	-	41	0	0.00	27	15	35.71
ZFYVE16	0	genome.wustl.edu	37	5	79747495	79747495	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	5	79747495	79747495	C	T	SNP	ZFYVE16	ENST00000338008	human	ensembl	74_37	+1	known	missense	c.3574	p.R1192C	1.000	pfam_DUF3480,pirsf_Znf_FYVE_SARA/endofin	pfam_DUF3480,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pirsf_Znf_FYVE_SARA/endofin,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE16	HGNC	ENSG00000039319	tier1	-	-	35	0	0.00	45	4	8.16
ZNF132	0	genome.wustl.edu	37	19	58945571	58945571	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	58945571	58945571	G	A	SNP	ZNF132	ENST00000254166	human	ensembl	74_37	-1	known	nonsense	c.1240	p.R414*	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF132	HGNC	ENSG00000131849	tier1	-	-	59	0	0.00	50	15	23.08
ZNF385D	0	genome.wustl.edu	37	3	21478515	21478515	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	3	21478515	21478515	G	A	SNP	ZNF385D	ENST00000281523	human	ensembl	74_37	-1	known	missense	c.620	p.S207L	1.000	smart_Znf_U1,smart_Znf_C2H2-like	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like	-	no_errors	ZNF385D	HGNC	ENSG00000151789	tier1	-	-	100	0	0.00	125	19	13.19
ZNF528	0	genome.wustl.edu	37	19	52919182	52919182	+	Silent	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	52919182	52919182	C	T	SNP	ZNF528	ENST00000360465	human	ensembl	74_37	+1	known	silent	c.1077	p.G359	0.885	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF528	HGNC	ENSG00000167555				25	0	0.00	24	3	11.11
ZNF558	0	genome.wustl.edu	37	19	8922177	8922177	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	8922177	8922177	C	T	SNP	ZNF558	ENST00000301475	human	ensembl	74_37	-1	known	missense	c.989	p.S330N	0.723	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF558	HGNC	ENSG00000167785	tier1	-	-	36	0	0.00	63	13	17.11
ZNF835	0	genome.wustl.edu	37	19	57175634	57175634	+	Silent	SNP	G	G	A			TCGA-L5-A43C-01A-11D-A247-09	TCGA-L5-A43C-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	eb19b408-d32e-4659-80ad-9fc2efa25260	455d8943-a709-4328-ac50-72df33b3ab0e	19	57175634	57175634	G	A	SNP	ZNF835	ENST00000537055	human	ensembl	74_37	-1	known	silent	c.933	p.C311	0.935	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF835	HGNC	ENSG00000127903	tier1	-	-	76	0	0.00	90	19	17.43
