Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ACTRT1	0	genome.wustl.edu	37	X	127185454	127185454	+	Silent	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	X	127185454	127185454	T	C	SNP	ACTRT1	ENST00000371124	human	ensembl	74_37	-1	known	silent	c.732	p.P244	0.996	pfam_Actin-related,smart_Actin-related,prints_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT1	HGNC	ENSG00000123165	tier1	-	-	18	0	0.00	6	24	80.00
ADAM7	0	genome.wustl.edu	37	8	24349447	24349447	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	8	24349447	24349447	C	T	SNP	ADAM7	ENST00000175238	human	ensembl	74_37	+1	known	missense	c.1388	p.A463V	0.833	pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM7	HGNC	ENSG00000069206	tier1	rs144309204	-	33	0	0.00	22	9	29.03
ADAMTS14	0	genome.wustl.edu	37	10	72511953	72511953	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	10	72511953	72511953	G	A	SNP	ADAMTS14	ENST00000373208	human	ensembl	74_37	+1	known	missense	c.2708	p.R903H	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS14	HGNC	ENSG00000138316	tier1	-	-	64	0	0.00	62	16	20.25
ADAMTS20	0	genome.wustl.edu	37	12	43819398	43819398	+	Silent	SNP	T	T	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	43819398	43819398	T	A	SNP	ADAMTS20	ENST00000389420	human	ensembl	74_37	-1	known	silent	c.4203	p.V1401	0.931	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS20	HGNC	ENSG00000173157	tier1	-	-	78	0	0.00	61	15	19.74
ADCY10	0	genome.wustl.edu	37	1	167780044	167780044	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	167780044	167780044	C	T	SNP	ADCY10	ENST00000367851	human	ensembl	74_37	-1	known	missense	c.4589	p.C1530Y	0.729	pirsf_Adenylate_cylcase_typ10	pfam_A/G_cyclase,superfamily_A/G_cyclase,superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase	-	no_errors	ADCY10	HGNC	ENSG00000143199	tier1	-	-	39	0	0.00	27	10	27.03
ADCY8	0	genome.wustl.edu	37	8	132051965	132051965	+	Silent	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	8	132051965	132051965	C	T	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	silent	c.615	p.S205	0.947	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897	tier1	-	-	11	0	0.00	24	7	21.88
AEBP1	0	genome.wustl.edu	37	7	44153728	44153728	+	Silent	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	44153728	44153728	T	C	SNP	AEBP1	ENST00000223357	human	ensembl	74_37	+1	known	silent	c.3345	p.P1115	0.092	NULL	pfam_Peptidase_M14,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_CarboxyPept-like_regulatory,smart_Coagulation_fac_5/8-C_type_dom,smart_Peptidase_M14,pfscan_Coagulation_fac_5/8-C_type_dom,prints_Peptidase_M14	-	no_errors	AEBP1	HGNC	ENSG00000106624				17	0	0.00	33	5	13.16
AFF3	0	genome.wustl.edu	37	2	100623364	100623364	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	100623364	100623364	G	A	SNP	AFF3	ENST00000356421	human	ensembl	74_37	-1	known	silent	c.678	p.A226	0.001	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF3	HGNC	ENSG00000144218	tier1	-	-	14	0	0.00	21	7	25.00
ANK2	0	genome.wustl.edu	37	4	114275426	114275426	+	Silent	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	114275426	114275426	G	T	SNP	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	silent	c.5652	p.S1884	0.003	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362	tier1	-	-	64	0	0.00	42	33	44.00
ANKFN1	0	genome.wustl.edu	37	17	54588226	54588226	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	54588226	54588226	C	T	SNP	ANKFN1	ENST00000566473	human	ensembl	74_37	+1	novel	missense	c.3046	p.R1016C	1.000	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Fibronectin_type3,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Fibronectin_type3	-	no_errors	ANKFN1	HGNC	ENSG00000153930	tier1	-	-	36	0	0.00	70	8	10.26
ANKMY2	0	genome.wustl.edu	37	7	16640502	16640502	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	16640502	16640502	G	C	SNP	ANKMY2	ENST00000306999	human	ensembl	74_37	-1	known	missense	c.1210	p.Q404E	0.003	NULL	pfam_Ankyrin_rpt,pfam_Znf_MYND,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Znf_MYND	-	no_errors	ANKMY2	HGNC	ENSG00000106524	tier1	-	-	26	0	0.00	28	16	36.36
ANKRD20A11P	0	genome.wustl.edu	37	21	15310382	15310382	+	RNA	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	21	15310382	15310382	G	A	SNP	ANKRD20A11P	ENST00000428576	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.108	-	-	-	no_errors	ANKRD20A11P	HGNC	ENSG00000215559	tier1	-	-	71	0	0.00	61	17	21.79
ANKZF1	0	genome.wustl.edu	37	2	220099955	220099955	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	220099955	220099955	C	T	SNP	ANKZF1	ENST00000323348	human	ensembl	74_37	+1	known	missense	c.1612	p.L538F	0.992	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKZF1	HGNC	ENSG00000163516	tier1	-	-	32	0	0.00	29	32	52.46
APOB	0	genome.wustl.edu	37	2	21232670	21232670	+	Nonsense_Mutation	SNP	A	A	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	21232670	21232670	A	T	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	nonsense	c.7070	p.L2357*	0.978	superfamily_ARM-type_fold	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674	tier1	-	-	65	0	0.00	76	23	23.23
APOC2	0	genome.wustl.edu	37	19	45452446	45452446	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	45452446	45452446	G	T	SNP	APOC2	ENST00000252490	human	ensembl	74_37	+1	known	missense	c.246	p.M82I	0.058	pfam_Apo-CII	pfam_Apo-CII	-	no_errors	APOC2	HGNC	ENSG00000234906	tier1	-	-	61	0	0.00	56	4	6.67
AQPEP	0	genome.wustl.edu	37	5	115335467	115335468	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	5	115335467	115335468	-	T	INS	AQPEP	ENST00000357872	human	ensembl	74_37	+1	known	frame_shift_ins	c.1383_1384	p.S463fs	0.153:0.933	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	AQPEP	Uniprot_gn	ENSG00000172901	tier1			28	0	0.00	18	12	40.00
ARF6	0	genome.wustl.edu	37	14	50360743	50360743	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	14	50360743	50360743	G	A	SNP	ARF6	ENST00000298316	human	ensembl	74_37	+1	known	missense	c.289	p.D97N	1.000	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,pfam_Gprotein_alpha_su,pfam_Gtr1_RagA,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,smart_Small_GTPase_Rab_type,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,pfam_Gprotein_alpha_su,pfam_Gtr1_RagA,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,smart_Small_GTPase_Rab_type,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	ARF6	HGNC	ENSG00000165527				17	0	0.00	44	5	10.20
ARHGAP31	0	genome.wustl.edu	37	3	119133144	119133144	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	119133144	119133144	C	G	SNP	ARHGAP31	ENST00000264245	human	ensembl	74_37	+1	known	missense	c.2368	p.P790A	0.009	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP31	HGNC	ENSG00000031081				26	0	0.00	39	4	9.30
ARID3B	0	genome.wustl.edu	37	15	74889136	74889137	+	RNA	INS	-	-	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	15	74889136	74889137	-	T	INS	ARID3B	ENST00000563567	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.086:0.068	-	-	-	no_errors	ARID3B	HGNC	ENSG00000179361	tier1			25	0	0.00	34	3	8.11
ASCC3	0	genome.wustl.edu	37	6	101076966	101076966	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	101076966	101076966	C	A	SNP	ASCC3	ENST00000369162	human	ensembl	74_37	-1	known	missense	c.4300	p.V1434F	0.992	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,pfscan_Helicase_ATP-bd	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ASCC3	HGNC	ENSG00000112249	tier1	-	-	56	0	0.00	54	16	22.86
ASPSCR1	0	genome.wustl.edu	37	17	79970144	79970144	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	79970144	79970144	G	A	SNP	ASPSCR1	ENST00000584454	human	ensembl	74_37	+1	known	missense	c.1228	p.A410T	0.000	NULL	NULL	-	no_errors	ASPSCR1	HGNC	ENSG00000169696	tier1	rs148162287	-	13	0	0.00	19	24	55.81
ATP1B1	0	genome.wustl.edu	37	1	169100709	169100709	+	Nonsense_Mutation	SNP	T	T	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	169100709	169100709	T	A	SNP	ATP1B1	ENST00000367815	human	ensembl	74_37	+1	known	nonsense	c.828	p.C276*	1.000	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	-	no_errors	ATP1B1	HGNC	ENSG00000143153	tier1	-	-	79	0	0.00	59	22	27.16
ATP2C1	0	genome.wustl.edu	37	3	130672710	130672710	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	130672710	130672710	A	C	SNP	ATP2C1	ENST00000393221	human	ensembl	74_37	+1	known	missense	c.679	p.T227P	0.974	pfam_ATPase_P-typ_transduc_dom_A,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_PMR1,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_PMR1,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2C1	HGNC	ENSG00000017260	tier1	-	-	61	0	0.00	71	8	10.13
ATXN7L1	0	genome.wustl.edu	37	7	105248338	105248338	+	Splice_Site	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	105248338	105248338	C	T	SNP	ATXN7L1	ENST00000419735	human	ensembl	74_37	-1	known	splice_site	c.2548-1	e12-1	1.000	-	-	-	no_errors	ATXN7L1	HGNC	ENSG00000146776	tier1	-	-	145	0	0.00	188	34	15.32
AZGP1P1	0	genome.wustl.edu	37	7	99581021	99581021	+	RNA	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	99581021	99581021	G	A	SNP	AZGP1P1	ENST00000425474	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	AZGP1P1	HGNC	ENSG00000214313	tier1	-	-	102	0	0.00	72	26	26.26
BNC1	0	genome.wustl.edu	37	15	83932730	83932730	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	15	83932730	83932730	C	T	SNP	BNC1	ENST00000345382	human	ensembl	74_37	-1	known	missense	c.1273	p.D425N	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC1	HGNC	ENSG00000169594	tier1	-	-	24	0	0.00	17	11	39.29
BOLL	0	genome.wustl.edu	37	2	198636637	198636637	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	198636637	198636637	T	C	SNP	BOLL	ENST00000321801	human	ensembl	74_37	-1	known	missense	c.458	p.H153R	1.000	NULL	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	BOLL	HGNC	ENSG00000152430	tier1	-	-	35	0	0.00	21	21	50.00
BOLL	0	genome.wustl.edu	37	2	198636638	198636638	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	198636638	198636638	G	T	SNP	BOLL	ENST00000321801	human	ensembl	74_37	-1	known	missense	c.457	p.H153N	1.000	NULL	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	BOLL	HGNC	ENSG00000152430	tier1	-	-	35	0	0.00	21	22	51.16
BPTF	0	genome.wustl.edu	37	17	65905706	65905717	+	In_Frame_Del	DEL	AATATGGATGAA	AATATGGATGAA	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	AATATGGATGAA	AATATGGATGAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	65905706	65905717	AATATGGATGAA	0	DEL	BPTF	ENST00000321892	human	ensembl	74_37	+1	known	in_frame_del	c.3199_3210	p.ENMD1070in_frame_del	0.655:0.030:0.014:0.037:0.156:0.668:0.995:0.999:1.000:1.000:1.000:1.000	NULL	pfam_Bromodomain,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BPTF	HGNC	ENSG00000171634				56	0	0.00	73	4	5.19
BSN	0	genome.wustl.edu	37	3	49699193	49699193	+	Silent	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	49699193	49699193	C	T	SNP	BSN	ENST00000296452	human	ensembl	74_37	+1	known	silent	c.9915	p.L3305	1.000	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061	tier1	-	-	32	0	0.00	22	11	33.33
BTRC	0	genome.wustl.edu	37	10	103310478	103310478	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	10	103310478	103310478	G	A	SNP	BTRC	ENST00000370187	human	ensembl	74_37	+1	known	missense	c.1679	p.R560Q	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_Beta-TrCP_D,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	BTRC	HGNC	ENSG00000166167	tier1	-	-	92	0	0.00	51	24	32.00
C10orf112	0	genome.wustl.edu	37	10	19778070	19778070	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	10	19778070	19778070	A	G	SNP	C10orf112	ENST00000454679	human	ensembl	74_37	+1	known	missense	c.3095	p.E1032G	0.003	NULL	pfam_MAM_dom,pfam_LDrepeatLR_classA_rpt,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_MAM_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,prints_LDrepeatLR_classA_rpt,prints_MAM_dom	-	no_errors	C10orf112	HGNC	ENSG00000204740	tier1	-	-	27	0	0.00	44	24	35.29
C6orf165	0	genome.wustl.edu	37	6	88126494	88126494	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	88126494	88126494	A	C	SNP	C6orf165	ENST00000369562	human	ensembl	74_37	+1	known	missense	c.580	p.I194L	1.000	NULL	pfam_DUF3508	-	no_errors	C6ORF165	Uniprot_gn	ENSG00000272514	tier1	-	-	58	0	0.00	27	23	46.00
C7	0	genome.wustl.edu	37	5	40945409	40945409	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	5	40945409	40945409	G	A	SNP	C7	ENST00000313164	human	ensembl	74_37	+1	known	missense	c.677	p.R226K	0.000	NULL	pfam_MACPF,pfam_Sushi_SCR_CCP,pfam_LDrepeatLR_classA_rpt,pfam_Thrombospondin_1_rpt,superfamily_Sushi_SCR_CCP,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,smart_Sushi_SCR_CCP,smart_FacI_MAC,pfscan_LDrepeatLR_classA_rpt,pfscan_Sushi_SCR_CCP,pfscan_Thrombospondin_1_rpt,prints_MAC_perforin	-	no_errors	C7	HGNC	ENSG00000112936				47	0	0.00	63	4	5.97
C9orf64	0	genome.wustl.edu	37	9	86554642	86554642	+	Nonsense_Mutation	SNP	A	A	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	9	86554642	86554642	A	T	SNP	C9orf64	ENST00000376344	human	ensembl	74_37	-1	known	nonsense	c.810	p.Y270*	1.000	pfam_DUF2419	pfam_DUF2419	-	no_errors	C9orf64	HGNC	ENSG00000165118				26	0	0.00	13	2	13.33
CAMK2B	0	genome.wustl.edu	37	7	44279215	44279215	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	44279215	44279215	C	T	SNP	CAMK2B	ENST00000395749	human	ensembl	74_37	-1	known	missense	c.994	p.G332S	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK2B	HGNC	ENSG00000058404	tier1	-	-	79	0	0.00	156	29	15.68
CAPN11	0	genome.wustl.edu	37	6	44148528	44148528	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	44148528	44148528	G	T	SNP	CAPN11	ENST00000398776	human	ensembl	74_37	+1	known	missense	c.1790	p.R597M	0.062	NULL	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN11	HGNC	ENSG00000137225				23	0	0.00	45	4	8.16
CCDC13	0	genome.wustl.edu	37	3	42775004	42775004	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	42775004	42775004	G	A	SNP	CCDC13	ENST00000310232	human	ensembl	74_37	-1	known	missense	c.1469	p.P490L	0.144	NULL	superfamily_Prefoldin	-	no_errors	CCDC13	HGNC	ENSG00000244607	tier1	rs139169922	-	41	0	0.00	85	21	19.81
CCDC132	0	genome.wustl.edu	37	7	92902025	92902025	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	92902025	92902025	C	T	SNP	CCDC132	ENST00000305866	human	ensembl	74_37	+1	known	nonsense	c.781	p.R261*	1.000	pfam_Vacuolar_sorting-assoc_54	pfam_Vacuolar_sorting-assoc_54,pfam_DUF2451_C	-	no_errors	CCDC132	HGNC	ENSG00000004766	tier1	-	-	54	0	0.00	60	6	9.09
CCL7	0	genome.wustl.edu	37	17	32598171	32598171	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	32598171	32598171	T	G	SNP	CCL7	ENST00000200307	human	ensembl	74_37	+1	known	missense	c.113	p.I38S	0.000	superfamily_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL7	HGNC	ENSG00000108688	tier1	-	-	24	0	0.00	59	17	22.37
CCSER2	0	genome.wustl.edu	37	10	86259679	86259679	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	10	86259679	86259679	G	A	SNP	CCSER2	ENST00000224756	human	ensembl	74_37	+1	known	missense	c.2374	p.G792R	1.000	NULL	NULL	-	no_errors	CCSER2	HGNC	ENSG00000107771	tier1	-	-	21	0	0.00	16	16	50.00
CCT7	0	genome.wustl.edu	37	2	73470141	73470141	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	73470141	73470141	G	T	SNP	CCT7	ENST00000258091	human	ensembl	74_37	+1	known	missense	c.277	p.G93C	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_eta	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_eta	-	no_errors	CCT7	HGNC	ENSG00000135624	tier1	-	-	65	0	0.00	67	4	5.63
CD1E	0	genome.wustl.edu	37	1	158325247	158325247	+	Silent	SNP	G	G	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	158325247	158325247	G	C	SNP	CD1E	ENST00000368167	human	ensembl	74_37	+1	known	silent	c.513	p.V171	0.896	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1E	HGNC	ENSG00000158488	tier1	-	-	49	0	0.00	24	10	29.41
CDHR3	0	genome.wustl.edu	37	7	105636743	105636743	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	105636743	105636743	C	T	SNP	CDHR3	ENST00000317716	human	ensembl	74_37	+1	known	missense	c.656	p.S219F	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR3	HGNC	ENSG00000128536	tier1	-	-	74	0	0.00	120	30	20.00
CDK13	0	genome.wustl.edu	37	7	40027590	40027590	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	40027590	40027590	A	G	SNP	CDK13	ENST00000181839	human	ensembl	74_37	+1	known	missense	c.1604	p.D535G	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK13	HGNC	ENSG00000065883	tier1	-	-	29	0	0.00	26	18	40.91
CDK5RAP2	0	genome.wustl.edu	37	9	123216149	123216149	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	9	123216149	123216149	G	T	SNP	CDK5RAP2	ENST00000349780	human	ensembl	74_37	-1	known	missense	c.2378	p.P793Q	0.996	NULL	pfam_Spindle_assoc	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861				29	0	0.00	45	4	8.00
CELA1	0	genome.wustl.edu	37	12	51723603	51723603	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	51723603	51723603	G	A	SNP	CELA1	ENST00000293636	human	ensembl	74_37	-1	known	silent	c.624	p.G208	0.031	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CELA1	HGNC	ENSG00000139610	tier1	-	-	19	0	0.00	14	14	50.00
CHD9	0	genome.wustl.edu	37	16	53341776	53341776	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	16	53341776	53341776	G	A	SNP	CHD9	ENST00000398510	human	ensembl	74_37	+1	known	missense	c.6964	p.G2322S	0.177	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200	tier1	rs201884816	-	32	0	0.00	21	30	58.82
CHDC2	0	genome.wustl.edu	37	X	36103549	36103549	+	Nonsense_Mutation	SNP	A	A	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	X	36103549	36103549	A	T	SNP	CHDC2	ENST00000313548	human	ensembl	74_37	+1	known	nonsense	c.535	p.K179*	0.512	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain	-	no_errors	CHDC2	HGNC	ENSG00000176034	tier1	-	-	31	0	0.00	18	27	60.00
CHRD	0	genome.wustl.edu	37	3	184105786	184105786	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	184105786	184105786	G	A	SNP	CHRD	ENST00000204604	human	ensembl	74_37	+1	known	missense	c.2519	p.R840H	1.000	pfam_VWF_C,smart_VWF_C,pirsf_Chordin	pfam_CHRD,pfam_VWF_C,smart_VWF_C,smart_CHRD,pirsf_Chordin,pfscan_CHRD,pfscan_VWF_C	-	no_errors	CHRD	HGNC	ENSG00000090539	tier1	-	-	32	0	0.00	27	44	61.11
CHRNA1	0	genome.wustl.edu	37	2	175612893	175612893	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	175612893	175612893	C	T	SNP	CHRNA1	ENST00000261007	human	ensembl	74_37	-1	known	missense	c.1408	p.V470M	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel	-	no_errors	CHRNA1	HGNC	ENSG00000138435	tier1	-	-	31	0	0.00	32	7	17.95
CHST5	0	genome.wustl.edu	37	16	75563605	75563605	+	Silent	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	16	75563605	75563605	C	T	SNP	CHST5	ENST00000541075	human	ensembl	74_37	-1	known	silent	c.696	p.P232	0.955	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST5	HGNC	ENSG00000135702	tier1	-	-	19	0	0.00	17	7	29.17
CNTNAP3B	0	genome.wustl.edu	37	9	43844193	43844193	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	9	43844193	43844193	G	A	SNP	CNTNAP3B	ENST00000377564	human	ensembl	74_37	+1	known	silent	c.1527	p.G509	0.004	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP3B	HGNC	ENSG00000154529	tier1	rs199599712	-	26	0	0.00	27	8	22.86
COMP	0	genome.wustl.edu	37	19	18897059	18897059	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	18897059	18897059	C	T	SNP	COMP	ENST00000222271	human	ensembl	74_37	-1	known	missense	c.1297	p.D433N	1.000	NULL	pfam_Thrombospondin_C,pfam_EGF-like_Ca-bd_dom,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	COMP	HGNC	ENSG00000105664	tier1	-	-	24	0	0.00	29	11	27.50
CPXCR1	0	genome.wustl.edu	37	X	88009051	88009051	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	X	88009051	88009051	G	C	SNP	CPXCR1	ENST00000276127	human	ensembl	74_37	+1	known	missense	c.636	p.M212I	0.000	NULL	pfscan_Znf_C2H2	-	no_errors	CPXCR1	HGNC	ENSG00000147183	tier1	-	-	39	0	0.00	10	20	66.67
CTAGE1	0	genome.wustl.edu	37	18	19995559	19995559	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	18	19995559	19995559	A	-	DEL	CTAGE1	ENST00000391403	human	ensembl	74_37	-1	known	frame_shift_del	c.2216	p.F739fs	0.000	NULL	NULL	-	no_errors	CTAGE1	HGNC	ENSG00000212710	tier1			46	0	0.00	87	30	25.64
CTAGE1	0	genome.wustl.edu	37	18	19995559	19995559	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	18	19995559	19995559	A	G	SNP	CTAGE1	ENST00000391403	human	ensembl	74_37	-1	known	missense	c.2216	p.F739S	0.000	NULL	NULL	-	no_errors	CTAGE1	HGNC	ENSG00000212710				46	0	0.00	81	6	5.13
CUL7	0	genome.wustl.edu	37	6	43010843	43010843	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	43010843	43010843	G	A	SNP	CUL7	ENST00000535468	human	ensembl	74_37	-1	known	missense	c.3683	p.T1228M	1.000	NULL	pfam_Cullin_N,pfam_CPH_domain,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL7	HGNC	ENSG00000044090	tier1	-	-	20	0	0.00	12	18	60.00
CUX1	0	genome.wustl.edu	37	7	101821910	101821910	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	101821910	101821910	G	A	SNP	CUX1	ENST00000360264	human	ensembl	74_37	+1	known	silent	c.1023	p.Q341	1.000	superfamily_LemA-like_dom	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_LemA-like_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX1	HGNC	ENSG00000257923	tier1	-	-	22	0	0.00	21	6	22.22
CYB561D1	0	genome.wustl.edu	37	1	110038448	110038448	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	110038448	110038448	G	A	SNP	CYB561D1	ENST00000369868	human	ensembl	74_37	+1	known	missense	c.323	p.R108Q	1.000	pfam_Cyt_b561_euk,smart_Cyt_b561/ferric_Rdtase_TM,pfscan_Cyt_b561/ferric_Rdtase_TM	pfam_Cyt_b561_euk,smart_Cyt_b561/ferric_Rdtase_TM,pfscan_Cyt_b561/ferric_Rdtase_TM	-	no_errors	CYB561D1	HGNC	ENSG00000174151	tier1	-	-	36	0	0.00	25	21	45.65
CYLC2	0	genome.wustl.edu	37	9	105767543	105767543	+	Silent	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	9	105767543	105767543	A	G	SNP	CYLC2	ENST00000374798	human	ensembl	74_37	+1	known	silent	c.630	p.K210	0.000	NULL	NULL	-	no_errors	CYLC2	HGNC	ENSG00000155833	tier1	-	-	12	0	0.00	4	9	69.23
DACH2	0	genome.wustl.edu	37	X	85906159	85906159	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	X	85906159	85906159	A	C	SNP	DACH2	ENST00000373125	human	ensembl	74_37	+1	known	missense	c.761	p.N254T	1.000	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	DACH2	HGNC	ENSG00000126733	tier1	-	-	27	0	0.00	9	20	68.97
DCHS1	0	genome.wustl.edu	37	11	6648373	6648373	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	6648373	6648373	C	T	SNP	DCHS1	ENST00000299441	human	ensembl	74_37	-1	known	missense	c.5897	p.R1966H	0.864	superfamily_Cadherin-like	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS1	HGNC	ENSG00000166341	tier1	-	-	18	0	0.00	42	15	26.32
DCHS2	0	genome.wustl.edu	37	4	155407671	155407671	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	155407671	155407671	A	C	SNP	DCHS2	ENST00000443500	human	ensembl	74_37	-1	known	missense	c.2054	p.L685R	0.001	superfamily_Cadherin-like	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410	tier1	-	-	58	0	0.00	37	15	28.85
DCLK2	0	genome.wustl.edu	37	4	151160949	151160949	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	151160949	151160949	C	T	SNP	DCLK2	ENST00000302176	human	ensembl	74_37	+1	known	missense	c.1673	p.A558V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK2	HGNC	ENSG00000170390	tier1	-	-	116	0	0.00	89	30	25.21
DHX36	0	genome.wustl.edu	37	3	154018442	154018442	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	154018442	154018442	C	T	SNP	DHX36	ENST00000496811	human	ensembl	74_37	-1	known	missense	c.1402	p.D468N	1.000	superfamily_P-loop_NTPase	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX36	HGNC	ENSG00000174953	tier1	-	-	20	0	0.00	20	10	33.33
DLC1	0	genome.wustl.edu	37	8	12947941	12947941	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	8	12947941	12947941	G	A	SNP	DLC1	ENST00000276297	human	ensembl	74_37	-1	known	silent	c.3894	p.T1298	0.001	NULL	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	DLC1	HGNC	ENSG00000164741	tier1	-	-	17	0	0.00	16	8	33.33
DLG2	0	genome.wustl.edu	37	11	83674027	83674027	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	83674027	83674027	T	C	SNP	DLG2	ENST00000376104	human	ensembl	74_37	-1	known	missense	c.1241	p.N414S	1.000	pfam_PDZ_assoc,pirsf_M-assoc_guanylate_kinase	pfam_PDZ,pfam_GK/Ca_channel_bsu,pfam_MAGUK_PEST_N,pfam_PDZ_assoc,pfam_L27_1,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG2	HGNC	ENSG00000150672	tier1	-	-	67	0	0.00	93	5	5.10
DNAH12	0	genome.wustl.edu	37	3	57344830	57344830	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	57344830	57344830	T	C	SNP	DNAH12	ENST00000351747	human	ensembl	74_37	-1	known	missense	c.8207	p.E2736G	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH12	HGNC	ENSG00000174844	tier1	-	-	51	0	0.00	42	16	27.59
DNMT3B	0	genome.wustl.edu	37	20	31376728	31376728	+	Silent	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	20	31376728	31376728	C	T	SNP	DNMT3B	ENST00000328111	human	ensembl	74_37	+1	known	silent	c.723	p.A241	1.000	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	pfam_PWWP_dom,pfam_C5_MeTfrase,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	DNMT3B	HGNC	ENSG00000088305	tier1	-	-	86	0	0.00	95	95	50.00
DPP9	0	genome.wustl.edu	37	19	4714337	4714337	+	Silent	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	4714337	4714337	A	G	SNP	DPP9	ENST00000262960	human	ensembl	74_37	-1	known	silent	c.69	p.N23	0.117	NULL	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_X-Pro-like_dom	-	no_errors	DPP9	HGNC	ENSG00000142002	tier1	-	-	58	0	0.00	44	26	36.62
DSCAM	0	genome.wustl.edu	37	21	41416086	41416086	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	21	41416086	41416086	A	T	SNP	DSCAM	ENST00000400454	human	ensembl	74_37	-1	known	missense	c.5302	p.W1768R	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAM	HGNC	ENSG00000171587	tier1	-	-	93	0	0.00	62	14	18.42
DSCAML1	0	genome.wustl.edu	37	11	117392001	117392001	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	117392001	117392001	C	T	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.1237	p.E413K	0.998	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103	tier1	-	-	30	0	0.00	32	18	36.00
ELMO1	0	genome.wustl.edu	37	7	36934566	36934566	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	36934566	36934566	G	A	SNP	ELMO1	ENST00000310758	human	ensembl	74_37	-1	known	silent	c.1494	p.S498	0.989	NULL	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO1	HGNC	ENSG00000155849	tier1	-	-	101	0	0.00	81	76	48.41
ENSG00000216127	0	genome.wustl.edu	37	5	171866687	171866688	+	RNA	DEL	CA	CA	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	5	171866687	171866688	CA	-	DEL	ENSG00000216127	ENST00000401308	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.026:0.017	-	-	-	no_errors	AC011407.1	Clone_based_ensembl_gene	ENSG00000216127	tier1			18	0	0.00	11	5	31.25
ENSG00000218018	0	genome.wustl.edu	37	20	55967675	55967675	+	RNA	SNP	C	C	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	20	55967675	55967675	C	G	SNP	ENSG00000218018	ENST00000417346	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP4-800J21.3	Clone_based_vega_gene	ENSG00000218018	tier1	-	-	35	0	0.00	25	28	52.83
ENSG00000223579	0	genome.wustl.edu	37	22	20640516	20640516	+	RNA	SNP	G	G	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	22	20640516	20640516	G	C	SNP	ENSG00000223579	ENST00000577456	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.928	-	-	-	no_errors	AC011718.2	Clone_based_vega_gene	ENSG00000223579	tier1	-	-	202	0	0.00	109	63	36.63
ENSG00000237781	0	genome.wustl.edu	37	1	150527021	150527021	+	RNA	SNP	C	C	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	150527021	150527021	C	A	SNP	ENSG00000237781	ENST00000442435	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-54A4.2	Clone_based_vega_gene	ENSG00000237781	tier1	-	-	74	0	0.00	78	14	15.22
ENSG00000243008	0	genome.wustl.edu	37	13	25171244	25171244	+	RNA	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	13	25171244	25171244	A	G	SNP	ENSG00000243008	ENST00000453498	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.584	-	-	-	no_errors	RP11-556N21.1	Clone_based_vega_gene	ENSG00000243008				39	0	0.00	32	4	11.11
ENSG00000244219	0	genome.wustl.edu	37	7	99204390	99204390	+	RNA	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	99204390	99204390	G	A	SNP	ENSG00000244219	ENST00000431679	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GS1-259H13.2	Clone_based_vega_gene	ENSG00000244219	tier1	-	-	90	0	0.00	71	4	5.33
ENSG00000244953	0	genome.wustl.edu	37	11	43965440	43965440	+	RNA	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	43965440	43965440	C	T	SNP	ENSG00000244953	ENST00000501541	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-613D13.8	Clone_based_vega_gene	ENSG00000244953	tier1	-	-	25	0	0.00	19	15	44.12
ENSG00000247993	0	genome.wustl.edu	37	5	72742469	72742469	+	RNA	DEL	T	T	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	5	72742469	72742469	T	-	DEL	ENSG00000247993	ENST00000514661	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-79P5.2	Clone_based_vega_gene	ENSG00000247993	tier1			24	0	0.00	35	2	5.41
ENSG00000249509	0	genome.wustl.edu	37	4	113451620	113451620	+	RNA	SNP	C	C	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	113451620	113451620	C	A	SNP	ENSG00000249509	ENST00000504009	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-402J6.1	Clone_based_vega_gene	ENSG00000249509	tier1	-	-	25	0	0.00	16	7	30.43
ENSG00000255154	0	genome.wustl.edu	37	3	58303843	58303843	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	58303843	58303843	C	T	SNP	ENSG00000255154	ENST00000528153	human	ensembl	74_37	+1	novel	missense	c.503	p.S168F	0.965	NULL	pfam_MaoC_dom	-	no_errors	RPP14	Uniprot_gn	ENSG00000255154	tier1	-	-	30	0	0.00	8	6	42.86
ENSG00000259471	0	genome.wustl.edu	37	15	66977666	66977666	+	Nonstop_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	15	66977666	66977666	G	T	SNP	ENSG00000259471	ENST00000558797	human	ensembl	74_37	+1	novel	nonstop	c.341	p.*114L	0.000	NULL	NULL	-	no_errors	RP11-321F6.1	Clone_based_vega_gene	ENSG00000259471	tier1	-	-	67	0	0.00	90	8	8.16
ENSG00000259966	0	genome.wustl.edu	37	16	32621197	32621197	+	RNA	SNP	T	T	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	16	32621197	32621197	T	G	SNP	ENSG00000259966	ENST00000566952	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-652G5.1	Clone_based_vega_gene	ENSG00000259966	tier1	-	-	221	0	0.00	166	40	19.42
ENSG00000260005	0	genome.wustl.edu	37	17	79206346	79206346	+	RNA	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	79206346	79206346	G	A	SNP	ENSG00000260005	ENST00000575922	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC027601.1	Clone_based_vega_gene	ENSG00000260005	tier1	-	-	21	0	0.00	14	19	55.88
ENSG00000269888	0	genome.wustl.edu	37	3	161146953	161146953	+	RNA	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	161146953	161146953	C	T	SNP	ENSG00000269888	ENST00000602890	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-3P17.5	Clone_based_vega_gene	ENSG00000269888	tier1	-	-	47	0	0.00	34	19	35.85
EPC2	0	genome.wustl.edu	37	2	149519397	149519397	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	149519397	149519397	G	A	SNP	EPC2	ENST00000258484	human	ensembl	74_37	+1	known	missense	c.713	p.R238K	1.000	NULL	pfam_Enhancer_polycomb_C,pfam_Enhancer_polycomb-like_N	-	no_errors	EPC2	HGNC	ENSG00000135999	tier1	-	-	43	0	0.00	41	10	19.61
EPGN	0	genome.wustl.edu	37	4	75178002	75178002	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	75178002	75178002	G	T	SNP	EPGN	ENST00000413830	human	ensembl	74_37	+1	known	missense	c.234	p.E78D	0.983	pfscan_EG-like_dom	pfscan_EG-like_dom	-	no_errors	EPGN	HGNC	ENSG00000182585	tier1	-	-	72	0	0.00	62	4	6.06
ERBB4	0	genome.wustl.edu	37	2	212587123	212587123	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	212587123	212587123	C	T	SNP	ERBB4	ENST00000342788	human	ensembl	74_37	-1	known	missense	c.878	p.C293Y	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Furin-like_Cys-rich_dom,superfamily_Growth_fac_rcpt_N_dom	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB4	HGNC	ENSG00000178568	tier1	-	-	64	0	0.00	41	32	43.84
ERCC6	0	genome.wustl.edu	37	10	50714021	50714021	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	10	50714021	50714021	G	A	SNP	ERCC6	ENST00000355832	human	ensembl	74_37	-1	known	missense	c.1435	p.R479C	0.000	superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6	HGNC	ENSG00000225830	tier1	rs61749175	-	55	0	0.00	54	11	16.92
ETAA1	0	genome.wustl.edu	37	2	67630792	67630792	+	Silent	SNP	T	T	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	67630792	67630792	T	G	SNP	ETAA1	ENST00000272342	human	ensembl	74_37	+1	known	silent	c.978	p.T326	0.002	NULL	NULL	-	no_errors	ETAA1	HGNC	ENSG00000143971	tier1	-	-	40	0	0.00	36	9	20.00
EVC2	0	genome.wustl.edu	37	4	5696102	5696102	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	5696102	5696102	T	G	SNP	EVC2	ENST00000344408	human	ensembl	74_37	-1	known	missense	c.410	p.K137T	0.981	NULL	pfam_Limbin	-	no_errors	EVC2	HGNC	ENSG00000173040	tier1	-	-	71	0	0.00	61	32	34.41
EVI5L	0	genome.wustl.edu	37	19	7928412	7928412	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	7928412	7928412	G	A	SNP	EVI5L	ENST00000538904	human	ensembl	74_37	+1	known	missense	c.2242	p.E748K	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	EVI5L	HGNC	ENSG00000142459	tier1	-	-	9	0	0.00	11	8	42.11
FAM135B	0	genome.wustl.edu	37	8	139149481	139149481	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	8	139149481	139149481	G	A	SNP	FAM135B	ENST00000395297	human	ensembl	74_37	-1	known	silent	c.3924	p.V1308	0.998	pfam_DUF676_lipase-like	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like	-	no_errors	FAM135B	HGNC	ENSG00000147724	tier1	-	-	19	0	0.00	33	7	17.50
FAM86HP	0	genome.wustl.edu	37	3	129824457	129824457	+	RNA	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	129824457	129824457	C	T	SNP	FAM86HP	ENST00000500074	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.990	-	-	-	no_errors	FAM86HP	HGNC	ENSG00000253540	tier1	-	-	127	0	0.00	156	39	20.00
FANCA	0	genome.wustl.edu	37	16	89813023	89813023	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	16	89813023	89813023	G	T	SNP	FANCA	ENST00000389301	human	ensembl	74_37	-1	known	missense	c.3482	p.T1161K	0.643	NULL	pfam_Fanconia,prints_Fanconia	-	no_errors	FANCA	HGNC	ENSG00000187741				35	0	0.00	50	3	5.66
FLG	0	genome.wustl.edu	37	1	152277405	152277405	+	Silent	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	152277405	152277405	C	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	silent	c.9957	p.P3319	0.000	pfam_Filaggrin	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	145	0	0.00	168	55	24.66
FOLH1	0	genome.wustl.edu	37	11	49204779	49204779	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	49204779	49204779	C	T	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	missense	c.842	p.R281H	0.843	NULL	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	tier1	rs116795343	-	42	0	0.00	95	6	5.94
FOLH1	0	genome.wustl.edu	37	11	49204790	49204790	+	Silent	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	49204790	49204790	A	G	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	silent	c.831	p.Y277	1.000	NULL	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	tier1	rs76509850	-	36	0	0.00	79	7	8.14
FPGT-TNNI3K	0	genome.wustl.edu	37	1	74715142	74715142	+	Splice_Site	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	74715142	74715142	G	T	SNP	FPGT-TNNI3K	ENST00000557284	human	ensembl	74_37	+1	known	splice_site	c.492-1	e5-1	1.000	-	-	-	no_errors	FPGT-TNNI3K	HGNC	ENSG00000259030				44	0	0.00	44	3	6.25
FRYL	0	genome.wustl.edu	37	4	48501614	48501614	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	48501614	48501614	G	A	SNP	FRYL	ENST00000358350	human	ensembl	74_37	-1	known	missense	c.8867	p.T2956M	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FRYL	HGNC	ENSG00000075539	tier1	-	-	49	0	0.00	44	15	25.42
FSCN1	0	genome.wustl.edu	37	7	5645038	5645038	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	5645038	5645038	G	T	SNP	FSCN1	ENST00000382361	human	ensembl	74_37	+1	known	missense	c.1415	p.G472V	1.000	pfam_Fascin-domain,superfamily_Actin_cross-linking	pfam_Fascin-domain,superfamily_Actin_cross-linking	-	no_errors	FSCN1	HGNC	ENSG00000075618				25	0	0.00	46	4	8.00
FUK	0	genome.wustl.edu	37	16	70497528	70497528	+	Silent	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	16	70497528	70497528	C	T	SNP	FUK	ENST00000378912	human	ensembl	74_37	+1	known	silent	c.85	p.L29	1.000	NULL	pfam_Fucokinase,pfam_GHMP_kinase_C_dom,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Trimer_LpxA-like,prints_Galkinase	-	no_errors	FUK	HGNC	ENSG00000157353	tier1	-	-	37	0	0.00	34	10	22.73
FURIN	0	genome.wustl.edu	37	15	91422672	91422672	+	Splice_Site	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	15	91422672	91422672	A	C	SNP	FURIN	ENST00000268171	human	ensembl	74_37	+1	known	splice_site	c.1054-2	e9-2	1.000	-	-	-	no_errors	FURIN	HGNC	ENSG00000140564	tier1	-	-	22	0	0.00	16	13	44.83
GABBR1	0	genome.wustl.edu	37	6	29577143	29577144	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	29577143	29577144	-	G	INS	GABBR1	ENST00000377034	human	ensembl	74_37	-1	known	frame_shift_ins	c.1722_1721	p.A575fs	0.997:1.000	superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Sushi_SCR_CCP,superfamily_Peripla_BP_I,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,pfscan_Sushi_SCR_CCP,pfscan_GPCR_3_C	-	no_errors	GABBR1	HGNC	ENSG00000204681	tier1			25	0	0.00	34	11	24.44
GALNT14	0	genome.wustl.edu	37	2	31133619	31133619	+	RNA	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	31133619	31133619	A	G	SNP	GALNT14	ENST00000475320	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.529	-	-	-	no_errors	GALNT14	HGNC	ENSG00000158089	tier1	-	-	95	0	0.00	36	99	73.33
GAS2L2	0	genome.wustl.edu	37	17	34074081	34074081	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	34074081	34074081	G	A	SNP	GAS2L2	ENST00000254466	human	ensembl	74_37	-1	known	missense	c.1039	p.R347W	0.000	NULL	pfam_GAS2_dom,pfam_CH-domain,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_GAS2_dom,pfscan_CH-domain	-	no_errors	GAS2L2	HGNC	ENSG00000132139	tier1	-	-	21	0	0.00	29	12	29.27
GPR112	0	genome.wustl.edu	37	X	135428495	135428495	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	X	135428495	135428495	G	T	SNP	GPR112	ENST00000370652	human	ensembl	74_37	+1	known	missense	c.2630	p.R877M	0.272	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR112	HGNC	ENSG00000156920				22	0	0.00	32	4	11.11
GUCY2C	0	genome.wustl.edu	37	12	14766154	14766154	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	14766154	14766154	G	C	SNP	GUCY2C	ENST00000261170	human	ensembl	74_37	-1	known	missense	c.3119	p.A1040G	0.000	NULL	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_A/G_cyclase,superfamily_Peripla_BP_I,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2C	HGNC	ENSG00000070019	tier1	-	-	107	0	0.00	84	32	27.59
HDAC9	0	genome.wustl.edu	37	7	18788705	18788705	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	18788705	18788705	C	T	SNP	HDAC9	ENST00000441542	human	ensembl	74_37	+1	known	nonsense	c.1987	p.R663*	1.000	pfam_His_deacetylse_dom,pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC9	HGNC	ENSG00000048052	tier1	-	-	68	0	0.00	51	29	36.25
HECTD2	0	genome.wustl.edu	37	10	93242782	93242783	+	In_Frame_Ins	INS	-	-	AGG			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	10	93242782	93242783	-	AGG	INS	HECTD2	ENST00000446394	human	ensembl	74_37	+1	known	in_frame_ins	c.770_771	p.258in_frame_insG	1.000:1.000	NULL	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	-	no_errors	HECTD2	HGNC	ENSG00000165338	tier1			16	0	0.00	24	6	20.00
HELZ2	0	genome.wustl.edu	37	20	62193251	62193251	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	20	62193251	62193251	G	A	SNP	HELZ2	ENST00000467148	human	ensembl	74_37	-1	known	missense	c.6616	p.R2206C	0.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	HELZ2	HGNC	ENSG00000130589				10	0	0.00	22	3	12.00
HIST1H3H	0	genome.wustl.edu	37	6	27777905	27777905	+	Silent	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	27777905	27777905	C	T	SNP	HIST1H3H	ENST00000369163	human	ensembl	74_37	+1	known	silent	c.54	p.R18	1.000	superfamily_Histone-fold,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST1H3H	HGNC	ENSG00000203813	tier1	-	-	54	0	0.00	75	56	42.75
HIST1H4E	0	genome.wustl.edu	37	6	26205070	26205070	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	26205070	26205070	G	A	SNP	HIST1H4E	ENST00000360441	human	ensembl	74_37	+1	known	silent	c.198	p.V66	0.875	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4E	HGNC	ENSG00000198518	tier1	-	-	68	0	0.00	79	23	22.55
HMGN4	0	genome.wustl.edu	37	6	26545353	26545353	+	Splice_Site	SNP	A	A	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	26545353	26545353	A	T	SNP	HMGN4	ENST00000377575	human	ensembl	74_37	+1	known	splice_site	c.1-2	e1-2	0.008	-	-	-	no_errors	HMGN4	HGNC	ENSG00000182952	tier1	-	-	10	0	0.00	8	10	55.56
HNF1A	0	genome.wustl.edu	37	12	121437209	121437209	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	121437209	121437209	C	T	SNP	HNF1A	ENST00000541395	human	ensembl	74_37	+1	novel	missense	c.1640	p.A547V	0.000	NULL	pfam_HNF1b_C,pfam_HNF-1_N,pfam_HNF1a_C,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_HNF1_dimer_dom,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HNF1A	HGNC	ENSG00000135100	tier1	-	-	39	0	0.00	19	43	69.35
HOOK1	0	genome.wustl.edu	37	1	60325953	60325953	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	60325953	60325953	G	T	SNP	HOOK1	ENST00000371208	human	ensembl	74_37	+1	known	missense	c.1485	p.Q495H	1.000	pfam_Hook-related_fam	pfam_Hook-related_fam,superfamily_Prefoldin	-	no_errors	HOOK1	HGNC	ENSG00000134709	tier1	-	-	49	0	0.00	76	4	5.00
HSPG2	0	genome.wustl.edu	37	1	22186426	22186426	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	22186426	22186426	G	A	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.5084	p.S1695F	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798	tier1	-	-	23	0	0.00	44	16	26.67
HTT	0	genome.wustl.edu	37	4	3076604	3076606	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	3076604	3076606	CAG	0	DEL	HTT	ENST00000355072	human	ensembl	74_37	+1	known	in_frame_del	c.52_54	p.Q21in_frame_del	0.993:0.989:0.986	NULL	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386				10	0	0.00	15	5	25.00
IDE	0	genome.wustl.edu	37	10	94234656	94234656	+	Silent	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	10	94234656	94234656	G	T	SNP	IDE	ENST00000265986	human	ensembl	74_37	-1	known	silent	c.2058	p.L686	1.000	superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	IDE	HGNC	ENSG00000119912	tier1	-	-	49	0	0.00	46	4	8.00
IKZF1	0	genome.wustl.edu	37	7	50435935	50435935	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	50435935	50435935	A	T	SNP	IKZF1	ENST00000413698	human	ensembl	74_37	+1	putative	missense	c.392	p.N131I	0.000	NULL	NULL	-	no_errors	IKZF1	HGNC	ENSG00000185811	tier1	-	-	129	0	0.00	54	75	58.14
IKZF1	0	genome.wustl.edu	37	7	50468024	50468024	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	50468024	50468024	C	T	SNP	IKZF1	ENST00000331340	human	ensembl	74_37	+1	known	missense	c.1259	p.P420L	0.235	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF1	HGNC	ENSG00000185811	tier1	-	-	26	0	0.00	13	19	59.38
IRF2BPL	0	genome.wustl.edu	37	14	77493050	77493050	+	Silent	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	14	77493050	77493050	G	T	SNP	IRF2BPL	ENST00000238647	human	ensembl	74_37	-1	known	silent	c.1086	p.R362	0.996	pfam_Interferon_reg_fac2-bd1_2_Znf	pfam_Interferon_reg_fac2-bd1_2_Znf	-	no_errors	IRF2BPL	HGNC	ENSG00000119669				10	0	0.00	28	3	9.68
ITGA10	0	genome.wustl.edu	37	1	145525093	145525095	+	In_Frame_Del	DEL	TTC	TTC	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	TTC	TTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	145525093	145525095	TTC	-	DEL	ITGA10	ENST00000369304	human	ensembl	74_37	+1	known	in_frame_del	c.28_30	p.F10in_frame_del	0.724:0.719:0.746	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA10	HGNC	ENSG00000143127	tier1			125	0	0.00	80	51	38.93
ITGA10	0	genome.wustl.edu	37	1	145525099	145525099	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	145525099	145525099	C	-	DEL	ITGA10	ENST00000369304	human	ensembl	74_37	+1	known	frame_shift_del	c.34	p.L13fs	0.998	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA10	HGNC	ENSG00000143127	tier1			112	0	0.00	89	52	36.88
ITGAE	0	genome.wustl.edu	37	17	3664793	3664793	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	3664793	3664793	G	A	SNP	ITGAE	ENST00000263087	human	ensembl	74_37	-1	known	missense	c.337	p.R113W	0.016	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_VWF_A,smart_Int_alpha_beta-p,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGAE	HGNC	ENSG00000083457	tier1	-	-	26	0	0.00	5	18	78.26
ITIH5	0	genome.wustl.edu	37	10	7621717	7621717	+	Splice_Site	SNP	C	C	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	10	7621717	7621717	C	A	SNP	ITIH5	ENST00000256861	human	ensembl	74_37	-1	known	splice_site	c.1418+1	e9+1	1.000	-	-	-	no_errors	ITIH5	HGNC	ENSG00000123243	tier1	-	-	39	0	0.00	99	14	12.39
ITPKB	0	genome.wustl.edu	37	1	226834869	226834869	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	226834869	226834869	T	A	SNP	ITPKB	ENST00000272117	human	ensembl	74_37	-1	known	missense	c.2245	p.R749W	1.000	pfam_IPK	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772	tier1	-	-	43	0	0.00	69	18	20.69
JMJD7-PLA2G4B	0	genome.wustl.edu	37	15	42133719	42133719	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	15	42133719	42133719	G	A	SNP	JMJD7-PLA2G4B	ENST00000382448	human	ensembl	74_37	+1	known	missense	c.1133	p.R378Q	1.000	NULL	pfam_LysoPLipase_cat_dom,pfam_C2_dom,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_dom,smart_JmjC_dom,smart_C2_dom,smart_LysoPLipase_cat_dom,pfscan_JmjC_dom,pfscan_C2_dom,pfscan_LysoPLipase_cat_dom	-	no_errors	JMJD7-PLA2G4B	HGNC	ENSG00000168970	tier1	-	-	42	0	0.00	41	4	8.89
KANK4	0	genome.wustl.edu	37	1	62740569	62740569	+	Silent	SNP	C	C	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	62740569	62740569	C	A	SNP	KANK4	ENST00000371153	human	ensembl	74_37	-1	known	silent	c.207	p.L69	1.000	NULL	pfam_KN_motif,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK4	HGNC	ENSG00000132854	tier1	-	-	31	0	0.00	35	24	40.68
KCNJ12	0	genome.wustl.edu	37	17	21319073	21319073	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	21319073	21319073	C	T	SNP	KCNJ12	ENST00000331718	human	ensembl	74_37	+1	known	missense	c.419	p.T140M	1.000	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185	tier1	-	-	79	0	0.00	79	9	10.23
KCNJ9	0	genome.wustl.edu	37	1	160054576	160054576	+	Silent	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	160054576	160054576	C	T	SNP	KCNJ9	ENST00000368088	human	ensembl	74_37	+1	known	silent	c.756	p.D252	0.974	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.3	-	no_errors	KCNJ9	HGNC	ENSG00000162728	tier1	-	-	14	0	0.00	13	6	31.58
KCNN2	0	genome.wustl.edu	37	5	113740276	113740276	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	5	113740276	113740276	G	T	SNP	KCNN2	ENST00000264773	human	ensembl	74_37	+1	known	missense	c.724	p.A242S	1.000	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN2	HGNC	ENSG00000080709	tier1	-	-	50	0	0.00	46	22	32.35
KCTD2	0	genome.wustl.edu	37	17	73045404	73045404	+	Silent	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	73045404	73045404	T	C	SNP	KCTD2	ENST00000322444	human	ensembl	74_37	+1	known	silent	c.429	p.T143	0.604	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD2	HGNC	ENSG00000180901	tier1	-	-	54	0	0.00	79	19	19.39
KIAA0195	0	genome.wustl.edu	37	17	73482014	73482014	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	73482014	73482014	G	A	SNP	KIAA0195	ENST00000314256	human	ensembl	74_37	+1	known	silent	c.207	p.G69	0.817	NULL	pfam_ATPase_P-typ_cation-transptr_C	-	no_errors	KIAA0195	HGNC	ENSG00000177728	tier1	-	-	58	0	0.00	48	33	40.74
KIF4A	0	genome.wustl.edu	37	X	69521774	69521774	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	X	69521774	69521774	G	C	SNP	KIF4A	ENST00000374403	human	ensembl	74_37	+1	known	missense	c.541	p.V181L	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF4A	HGNC	ENSG00000090889	tier1	-	-	28	0	0.00	31	4	11.43
KMT2B	0	genome.wustl.edu	37	19	36211320	36211320	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	36211320	36211320	G	-	DEL	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	frame_shift_del	c.1071	p.E358fs	0.997	pirsf_MeTrfase_trithorax	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333	tier1			41	0	0.00	45	19	29.69
KRT6A	0	genome.wustl.edu	37	12	52886494	52886494	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	52886494	52886494	C	T	SNP	KRT6A	ENST00000330722	human	ensembl	74_37	-1	known	missense	c.479	p.R160Q	1.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6A	HGNC	ENSG00000205420	tier1	-	-	103	0	0.00	83	83	50.00
KRT8	0	genome.wustl.edu	37	12	53298675	53298675	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	53298675	53298675	A	C	SNP	KRT8	ENST00000293308	human	ensembl	74_37	-1	known	missense	c.91	p.S31A	0.000	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT8	HGNC	ENSG00000170421				45	0	0.00	52	3	5.45
LAPTM5	0	genome.wustl.edu	37	1	31211879	31211879	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	31211879	31211879	G	T	SNP	LAPTM5	ENST00000294507	human	ensembl	74_37	-1	known	missense	c.418	p.Q140K	1.000	pfam_LAPTM4/5,tigrfam_LAPTM_4A/5	pfam_LAPTM4/5,tigrfam_LAPTM_4A/5	-	no_errors	LAPTM5	HGNC	ENSG00000162511	tier1	-	-	51	0	0.00	29	29	50.00
LDHB	0	genome.wustl.edu	37	12	21788572	21788572	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	21788572	21788572	G	A	SNP	LDHB	ENST00000350669	human	ensembl	74_37	-1	known	silent	c.909	p.S303	0.988	pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C,pirsf_L-lactate/malate_DH,tigrfam_L-lactate_DH	pfam_Lactate/malate_DH_N,pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C,pirsf_L-lactate/malate_DH,prints_L-lactate/malate_DH,tigrfam_L-lactate_DH	-	no_errors	LDHB	HGNC	ENSG00000111716	tier1	-	-	87	0	0.00	60	37	38.14
LINC00862	0	genome.wustl.edu	37	1	200311674	200311674	+	RNA	DEL	C	C	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	200311674	200311674	C	-	DEL	LINC00862	ENST00000367355	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.026	-	-	-	no_errors	LINC00862	HGNC	ENSG00000203721	tier1			22	0	0.00	17	7	29.17
LOC100289333	0	genome.wustl.edu	37	19	12318361	12318361	+	RNA	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	12318361	12318361	G	A	SNP	LOC100289333	ENST00000415793	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CTD-2666L21.1	Clone_based_vega_gene	ENSG00000234773	tier1	-	-	33	0	0.00	28	7	20.00
LOC101927542	0	genome.wustl.edu	37	1	83912311	83912311	+	RNA	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	83912311	83912311	A	C	SNP	LOC101927542	ENST00000446227	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-413G15.1	Clone_based_vega_gene	ENSG00000231364				33	0	0.00	52	3	5.45
LOC101929948	0	genome.wustl.edu	37	14	19563255	19563255	+	RNA	SNP	T	T	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	14	19563255	19563255	T	G	SNP	LOC101929948	ENST00000548748	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.474	-	-	-	no_errors	CTD-2311B13.5	Clone_based_vega_gene	ENSG00000258252	tier1	rs201460973	-	26	0	0.00	18	10	35.71
LOC101930401	0	genome.wustl.edu	37	4	70080532	70080532	+	RNA	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	70080532	70080532	C	T	SNP	LOC101930401	ENST00000505646	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-704M14.1	Clone_based_vega_gene	ENSG00000250696	tier1	-	-	47	0	0.00	13	11	45.83
LOC101930401	0	genome.wustl.edu	37	4	70080559	70080559	+	RNA	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	70080559	70080559	G	A	SNP	LOC101930401	ENST00000505646	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	RP11-704M14.1	Clone_based_vega_gene	ENSG00000250696	tier1	-	-	38	0	0.00	11	13	54.17
LOC146880	0	genome.wustl.edu	37	17	62750203	62750203	+	RNA	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	62750203	62750203	C	T	SNP	LOC146880	ENST00000400873	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	hsa-mir-6080	miRBase	ENSG00000215769	tier1	-	-	86	0	0.00	67	79	54.11
LOC440518	0	genome.wustl.edu	37	19	22786054	22786054	+	RNA	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	22786054	22786054	A	G	SNP	LOC440518	ENST00000600260	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.170	-	-	-	no_errors	CTC-457E21.3	Clone_based_vega_gene	ENSG00000269332	tier1	-	-	74	0	0.00	39	51	56.67
LRP1	0	genome.wustl.edu	37	12	57577916	57577916	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	57577916	57577916	G	A	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	missense	c.5978	p.R1993Q	1.000	pfam_LDLR_classB_rpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	tier1	-	-	22	0	0.00	15	6	28.57
LRP1B	0	genome.wustl.edu	37	2	141643766	141643766	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	141643766	141643766	A	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.3905	p.L1302R	1.000	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	92	0	0.00	100	20	16.53
LRRIQ1	0	genome.wustl.edu	37	12	85492714	85492714	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	85492714	85492714	G	A	SNP	LRRIQ1	ENST00000393217	human	ensembl	74_37	+1	known	missense	c.3151	p.E1051K	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,smart_Leu-rich_rpt_typical-subtyp,pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ1	HGNC	ENSG00000133640	tier1	-	-	28	0	0.00	28	6	17.65
LUZP2	0	genome.wustl.edu	37	11	25098874	25098874	+	Splice_Site	SNP	G	G	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	25098874	25098874	G	C	SNP	LUZP2	ENST00000336930	human	ensembl	74_37	+1	known	splice_site	c.859-1	e11-1	0.770	-	-	-	no_errors	LUZP2	HGNC	ENSG00000187398	tier1	-	-	53	0	0.00	53	14	20.90
MACF1	0	genome.wustl.edu	37	1	39785373	39785373	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	39785373	39785373	T	C	SNP	MACF1	ENST00000317713	human	ensembl	74_37	+1	known	missense	c.3998	p.L1333P	1.000	smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1	-	-	41	0	0.00	48	10	17.24
MAGEL2	0	genome.wustl.edu	37	15	23890248	23890248	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	15	23890248	23890248	C	T	SNP	MAGEL2	ENST00000532292	human	ensembl	74_37	-1	known	missense	c.833	p.R278H	0.011	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585	tier1	-	-	61	0	0.00	50	45	47.37
MAGI2	0	genome.wustl.edu	37	7	77885499	77885499	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	77885499	77885499	A	C	SNP	MAGI2	ENST00000354212	human	ensembl	74_37	-1	known	missense	c.1808	p.L603R	1.000	superfamily_PDZ	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI2	HGNC	ENSG00000187391	tier1	-	-	35	0	0.00	45	4	8.16
MAP4	0	genome.wustl.edu	37	3	47896781	47896781	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	47896781	47896781	G	T	SNP	MAP4	ENST00000360240	human	ensembl	74_37	-1	known	missense	c.3218	p.S1073Y	1.000	pfam_MAP_tubulin-bd_rpt	pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP4	HGNC	ENSG00000047849				43	0	0.00	53	3	5.36
MASTL	0	genome.wustl.edu	37	10	27454026	27454026	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	10	27454026	27454026	C	T	SNP	MASTL	ENST00000375940	human	ensembl	74_37	+1	known	missense	c.587	p.S196L	1.000	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MASTL	HGNC	ENSG00000120539	tier1	-	-	31	0	0.00	35	16	31.37
MGAM	0	genome.wustl.edu	37	7	141765396	141765396	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	141765396	141765396	G	A	SNP	MGAM	ENST00000475668	human	ensembl	74_37	+1	putative	missense	c.4627	p.E1543K	1.000	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335	tier1	-	-	71	0	0.00	76	38	33.33
MGAT2	0	genome.wustl.edu	37	14	50089073	50089073	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	14	50089073	50089073	A	C	SNP	MGAT2	ENST00000305386	human	ensembl	74_37	+1	known	missense	c.1087	p.K363Q	1.000	pfam_GlcNAc_II	pfam_GlcNAc_II	-	no_errors	MGAT2	HGNC	ENSG00000168282	tier1	-	-	27	0	0.00	17	10	37.04
MIR525	0	genome.wustl.edu	37	19	54200830	54200830	+	RNA	DEL	A	A	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	54200830	54200830	A	-	DEL	MIR525	ENST00000384978	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	MIR525	HGNC	ENSG00000207711	tier1			78	0	0.00	114	20	14.93
MLEC	0	genome.wustl.edu	37	12	121131925	121131925	+	Silent	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	121131925	121131925	G	T	SNP	MLEC	ENST00000228506	human	ensembl	74_37	+1	known	silent	c.267	p.L89	1.000	pfam_Malectin	pfam_Malectin	-	no_errors	MLEC	HGNC	ENSG00000110917	tier1	-	-	59	0	0.00	37	4	9.76
MN1	0	genome.wustl.edu	37	22	28146768	28146769	+	RNA	INS	-	-	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	22	28146768	28146769	-	G	INS	MN1	ENST00000497225	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.962:0.964	-	-	-	no_errors	MN1	HGNC	ENSG00000169184	tier1			9	0	0.00	5	3	37.50
MSTN	0	genome.wustl.edu	37	2	190922215	190922215	+	Silent	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	190922215	190922215	G	T	SNP	MSTN	ENST00000260950	human	ensembl	74_37	-1	known	silent	c.897	p.I299	0.992	pfam_TGF-b_C,smart_TGF-b_C	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	MSTN	HGNC	ENSG00000138379				28	0	0.00	38	2	5.00
MT-TI	0	genome.wustl.edu	37	MT	4296	4296	+	RNA	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	MT	4296	4296	G	A	SNP	MT-TI	ENST00000387365	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-TI	HGNC	ENSG00000210100	tier1	-	-	53	0	0.00	2	30	93.75
MTCH1	0	genome.wustl.edu	37	6	36938576	36938576	+	RNA	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	36938576	36938576	C	T	SNP	MTCH1	ENST00000471737	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MTCH1	HGNC	ENSG00000137409	tier1	-	-	11	0	0.00	13	5	26.32
MTR	0	genome.wustl.edu	37	1	236988684	236988684	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	236988684	236988684	G	C	SNP	MTR	ENST00000366577	human	ensembl	74_37	+1	known	missense	c.912	p.M304I	1.000	pfam_S_MeTrfase,superfamily_S_MeTrfase,pirsf_MetH,pfscan_S_MeTrfase,tigrfam_MetH	pfam_S_MeTrfase,pfam_VitB12-dep_Met_synth_activ_dom,pfam_Pterin-binding,pfam_Cbl-bd_cap,pfam_Cobalamin-bd,superfamily_VitB12-dep_Met_synth_activ_dom,superfamily_S_MeTrfase,superfamily_Dihydropteroate_synth-like,superfamily_Cobalamin-bd,superfamily_Cbl-bd_cap,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom,pfscan_S_MeTrfase,pfscan_Pterin-binding,tigrfam_MetH	-	no_errors	MTR	HGNC	ENSG00000116984	tier1	-	-	47	0	0.00	64	15	18.99
MUC16	0	genome.wustl.edu	37	19	9073728	9073728	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	9073728	9073728	C	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.13718	p.S4573I	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	57	0	0.00	45	36	44.44
MUC19	0	genome.wustl.edu	37	12	40919229	40919229	+	RNA	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	40919229	40919229	T	C	SNP	MUC19	ENST00000474954	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.035	-	-	-	no_errors	MUC19	HGNC	ENSG00000205592	tier1	-	-	94	0	0.00	72	81	52.94
MUC4	0	genome.wustl.edu	37	3	195509178	195509178	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	195509178	195509178	G	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	silent	c.9273	p.V3091	0.947	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	-	-	278	0	0.00	349	45	11.39
MYH7B	0	genome.wustl.edu	37	20	33586548	33586548	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	20	33586548	33586548	G	A	SNP	MYH7B	ENST00000262873	human	ensembl	74_37	+1	novel	silent	c.4146	p.V1382	0.991	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Myosin_S1_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7B	HGNC	ENSG00000078814	tier1	-	-	17	0	0.00	20	8	28.57
NCAM2	0	genome.wustl.edu	37	21	22910257	22910257	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	21	22910257	22910257	A	C	SNP	NCAM2	ENST00000400546	human	ensembl	74_37	+1	known	missense	c.2493	p.K831N	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom,prints_Neural_cell_adh	-	no_errors	NCAM2	HGNC	ENSG00000154654	tier1	-	-	16	0	0.00	7	6	46.15
NCAPD3	0	genome.wustl.edu	37	11	134054596	134054596	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	134054596	134054596	C	A	SNP	NCAPD3	ENST00000534548	human	ensembl	74_37	-1	known	missense	c.2387	p.S796I	0.996	superfamily_ARM-type_fold,pirsf_NCAPD3	superfamily_ARM-type_fold,pirsf_NCAPD3	-	no_errors	NCAPD3	HGNC	ENSG00000151503	tier1	-	-	30	0	0.00	19	13	40.62
NCKAP1L	0	genome.wustl.edu	37	12	54925986	54925986	+	Silent	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	54925986	54925986	T	C	SNP	NCKAP1L	ENST00000293373	human	ensembl	74_37	+1	known	silent	c.2814	p.G938	0.964	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1,superfamily_Nucl_hormone_rcpt_ligand-bd	-	no_errors	NCKAP1L	HGNC	ENSG00000123338	tier1	-	-	48	0	0.00	54	10	15.62
NCOA6	0	genome.wustl.edu	37	20	33337958	33337958	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	20	33337958	33337958	G	A	SNP	NCOA6	ENST00000359003	human	ensembl	74_37	-1	known	silent	c.2040	p.P680	1.000	NULL	NULL	-	no_errors	NCOA6	HGNC	ENSG00000198646	tier1	-	-	13	0	0.00	29	10	25.64
NKAPL	0	genome.wustl.edu	37	6	28227211	28227211	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	28227211	28227211	G	A	SNP	NKAPL	ENST00000343684	human	ensembl	74_37	+1	known	missense	c.62	p.R21H	0.018	NULL	pfam_DUF926	-	no_errors	NKAPL	HGNC	ENSG00000189134	tier1	-	-	44	0	0.00	41	43	51.19
NME8	0	genome.wustl.edu	37	7	37903985	37903985	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	37903985	37903985	G	T	SNP	NME8	ENST00000199447	human	ensembl	74_37	+1	known	missense	c.490	p.A164S	0.964	pfam_Nucleoside_diP_kinase,superfamily_Nucleoside_diP_kinase	pfam_Nucleoside_diP_kinase,pfam_Thioredoxin_domain,superfamily_Nucleoside_diP_kinase,superfamily_Thioredoxin-like_fold,smart_Nucleoside_diP_kinase	-	no_errors	NME8	HGNC	ENSG00000086288				32	0	0.00	47	3	6.00
NOX3	0	genome.wustl.edu	37	6	155775979	155775979	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	155775979	155775979	C	T	SNP	NOX3	ENST00000159060	human	ensembl	74_37	-1	known	missense	c.221	p.R74Q	1.000	pfam_Fe3_Rdtase_TM_dom	pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	NOX3	HGNC	ENSG00000074771	tier1	-	-	17	0	0.00	20	5	20.00
NRG1	0	genome.wustl.edu	37	8	32406297	32406297	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	8	32406297	32406297	G	A	SNP	NRG1	ENST00000338921	human	ensembl	74_37	+1	known	missense	c.53	p.R18Q	0.288	NULL	pfam_Neuregulin_1_C,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Ig-like_dom,prints_Neuregulin	-	no_errors	NRG1	HGNC	ENSG00000157168				14	0	0.00	25	5	16.67
NRXN3	0	genome.wustl.edu	37	14	80164036	80164036	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	14	80164036	80164036	G	T	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	missense	c.3737	p.R1246L	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645	tier1	-	-	30	0	0.00	23	10	30.30
NSD1	0	genome.wustl.edu	37	5	176638741	176638741	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	5	176638741	176638741	T	A	SNP	NSD1	ENST00000439151	human	ensembl	74_37	+1	known	missense	c.3341	p.V1114D	0.000	NULL	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	NSD1	HGNC	ENSG00000165671	tier1	-	-	44	0	0.00	29	5	14.71
NUP133	0	genome.wustl.edu	37	1	229586486	229586487	+	RNA	INS	-	-	TTG			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	229586486	229586487	-	TTG	INS	NUP133	ENST00000485119	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005:0.007	-	-	-	no_errors	NUP133	HGNC	ENSG00000069248	tier1			8	0	0.00	5	6	54.55
NUP153	0	genome.wustl.edu	37	6	17649509	17649509	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	17649509	17649509	G	A	SNP	NUP153	ENST00000537253	human	ensembl	74_37	-1	known	missense	c.1511	p.P504L	1.000	pfam_Nucleoporin_Nup153	pfam_Nucleoporin_Nup153,pfam_Znf_RanBP2,pfam_Retro-transposon_transp_CS,smart_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	NUP153	HGNC	ENSG00000124789	tier1	-	-	75	0	0.00	57	4	6.56
NUP210	0	genome.wustl.edu	37	3	13415268	13415268	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	13415268	13415268	C	A	SNP	NUP210	ENST00000254508	human	ensembl	74_37	-1	known	missense	c.1537	p.V513L	1.000	superfamily_Invasin/intimin_cell_adhesion	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182	tier1	-	-	42	0	0.00	62	4	6.06
NUP98	0	genome.wustl.edu	37	11	3744432	3744432	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	3744432	3744432	C	T	SNP	NUP98	ENST00000324932	human	ensembl	74_37	-1	known	missense	c.2101	p.D701N	1.000	NULL	pfam_Nup96,pfam_Peptidase_S59,superfamily_Peptidase_S59	-	no_errors	NUP98	HGNC	ENSG00000110713	tier1	-	-	59	0	0.00	45	25	35.71
OC90	0	genome.wustl.edu	37	8	133067236	133067236	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	8	133067236	133067236	G	T	SNP	OC90	ENST00000443356	human	ensembl	74_37	-1	known	missense	c.38	p.P13H	0.017	NULL	pfam_PLipase_A2_dom,superfamily_PLipase_A2_dom,smart_PLipase_A2_dom,prints_PLipase_A2	-	no_errors	OC90	Uniprot_gn	ENSG00000258417	tier1	-	-	19	0	0.00	19	4	17.39
OPA3	0	genome.wustl.edu	37	19	46056804	46056804	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	46056804	46056804	C	T	SNP	OPA3	ENST00000263275	human	ensembl	74_37	-1	known	missense	c.508	p.A170T	0.000	NULL	pfam_OPA3-like	-	no_errors	OPA3	HGNC	ENSG00000125741	tier1	-	-	25	0	0.00	46	9	16.36
OPA3	0	genome.wustl.edu	37	19	46056849	46056849	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	46056849	46056849	C	G	SNP	OPA3	ENST00000263275	human	ensembl	74_37	-1	known	missense	c.463	p.E155Q	0.373	NULL	pfam_OPA3-like	-	no_errors	OPA3	HGNC	ENSG00000125741				11	0	0.00	33	4	10.81
OR2L8	0	genome.wustl.edu	37	1	248112938	248112938	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	248112938	248112938	G	A	SNP	OR2L8	ENST00000357191	human	ensembl	74_37	+1	known	missense	c.779	p.R260H	0.147	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2L8	HGNC	ENSG00000196936	tier1	-	-	99	0	0.00	103	34	24.82
OR2T33	0	genome.wustl.edu	37	1	248436537	248436537	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	248436537	248436537	C	T	SNP	OR2T33	ENST00000318021	human	ensembl	74_37	-1	known	missense	c.580	p.E194K	0.006	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T33	HGNC	ENSG00000177212	tier1	-	-	48	0	0.00	48	15	23.81
OR2T8	0	genome.wustl.edu	37	1	248084899	248084899	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	248084899	248084899	G	A	SNP	OR2T8	ENST00000319968	human	ensembl	74_37	+1	known	missense	c.580	p.E194K	0.003	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T8	HGNC	ENSG00000177462	tier1	-	-	24	0	0.00	30	9	23.08
OR4A15	0	genome.wustl.edu	37	11	55135565	55135565	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	55135565	55135565	G	T	SNP	OR4A15	ENST00000314706	human	ensembl	74_37	+1	known	missense	c.206	p.G69V	0.016	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A15	HGNC	ENSG00000181958	tier1	-	-	65	0	0.00	42	28	40.00
OR5AS1	0	genome.wustl.edu	37	11	55798490	55798490	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	55798490	55798490	T	G	SNP	OR5AS1	ENST00000313555	human	ensembl	74_37	+1	known	missense	c.596	p.L199R	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5AS1	HGNC	ENSG00000181785	tier1	-	-	58	0	0.00	65	15	18.75
OR5R1	0	genome.wustl.edu	37	11	56184775	56184775	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	56184775	56184775	A	C	SNP	OR5R1	ENST00000312253	human	ensembl	74_37	-1	known	missense	c.934	p.L312V	0.032	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5R1	HGNC	ENSG00000174942	tier1	-	-	42	0	0.00	30	4	11.76
OR8D2	0	genome.wustl.edu	37	11	124189525	124189525	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	124189525	124189525	G	C	SNP	OR8D2	ENST00000357438	human	ensembl	74_37	-1	known	missense	c.569	p.S190C	0.032	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8D2	HGNC	ENSG00000197263				65	0	0.00	60	4	6.25
OR8H3	0	genome.wustl.edu	37	11	55890577	55890577	+	Silent	SNP	T	T	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	55890577	55890577	T	A	SNP	OR8H3	ENST00000313472	human	ensembl	74_37	+1	known	silent	c.729	p.S243	0.565	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8H3	HGNC	ENSG00000181761	tier1	-	-	75	0	0.00	63	37	37.00
OXGR1	0	genome.wustl.edu	37	13	97639710	97639710	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	13	97639710	97639710	C	A	SNP	OXGR1	ENST00000298440	human	ensembl	74_37	-1	known	nonsense	c.304	p.G102*	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	OXGR1	HGNC	ENSG00000165621	tier1	-	-	41	0	0.00	14	37	72.55
PCDH10	0	genome.wustl.edu	37	4	134072185	134072185	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	134072185	134072185	C	T	SNP	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	missense	c.890	p.A297V	0.996	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650	tier1	-	-	16	0	0.00	18	14	43.75
PCDH10	0	genome.wustl.edu	37	4	134073196	134073196	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	134073196	134073196	G	A	SNP	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	missense	c.1901	p.R634H	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650	tier1	-	-	8	0	0.00	9	7	43.75
PCDHA12	0	genome.wustl.edu	37	5	140257113	140257113	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	5	140257113	140257113	G	A	SNP	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	missense	c.2056	p.A686T	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664	tier1	-	-	42	0	0.00	40	21	34.43
PCDHAC2	0	genome.wustl.edu	37	5	140348306	140348306	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	5	140348306	140348306	G	T	SNP	PCDHAC2	ENST00000289269	human	ensembl	74_37	+1	known	missense	c.1955	p.S652I	0.890	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHAC2	HGNC	ENSG00000243232	tier1	-	-	59	0	0.00	74	18	19.57
PCDHGA11	0	genome.wustl.edu	37	5	140801607	140801607	+	Silent	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	5	140801607	140801607	C	T	SNP	PCDHGA11	ENST00000398587	human	ensembl	74_37	+1	known	silent	c.813	p.D271	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA11	HGNC	ENSG00000253873	tier1	-	-	29	0	0.00	44	10	18.52
PCDHGA12	0	genome.wustl.edu	37	5	140811293	140811293	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	5	140811293	140811293	G	C	SNP	PCDHGA12	ENST00000252085	human	ensembl	74_37	+1	known	missense	c.967	p.D323H	0.998	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA12	HGNC	ENSG00000253159	tier1	-	-	23	0	0.00	41	7	14.58
PCDHGA5	0	genome.wustl.edu	37	5	140744501	140744501	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	5	140744501	140744501	C	T	SNP	PCDHGA5	ENST00000518069	human	ensembl	74_37	+1	known	missense	c.604	p.R202C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA5	HGNC	ENSG00000253485	tier1	-	-	27	0	0.00	19	9	32.14
PCDHGA8	0	genome.wustl.edu	37	5	140774174	140774174	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	5	140774174	140774174	G	A	SNP	PCDHGA8	ENST00000398604	human	ensembl	74_37	+1	known	silent	c.1794	p.S598	0.296	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA8	HGNC	ENSG00000253767	tier1	-	-	73	0	0.00	108	24	18.05
PCDHGB1	0	genome.wustl.edu	37	5	140730363	140730363	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	5	140730363	140730363	C	T	SNP	PCDHGB1	ENST00000523390	human	ensembl	74_37	+1	known	missense	c.536	p.T179M	0.013	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB1	HGNC	ENSG00000254221	tier1	-	-	29	0	0.00	21	9	30.00
PCNXL3	0	genome.wustl.edu	37	11	65391823	65391823	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	65391823	65391823	G	A	SNP	PCNXL3	ENST00000355703	human	ensembl	74_37	+1	known	missense	c.2702	p.R901Q	1.000	NULL	pfam_Pecanex	-	no_errors	PCNXL3	HGNC	ENSG00000197136	tier1	-	-	35	0	0.00	47	12	20.34
PCYT1A	0	genome.wustl.edu	37	3	195994152	195994152	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	195994152	195994152	G	A	SNP	PCYT1A	ENST00000438634	human	ensembl	74_37	-1	known	missense	c.202	p.R68W	0.008	NULL	NULL	-	no_errors	PCYT1A	HGNC	ENSG00000161217	tier1	-	-	31	0	0.00	21	29	58.00
PDE3A	0	genome.wustl.edu	37	12	20833381	20833381	+	RNA	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	20833381	20833381	A	C	SNP	PDE3A	ENST00000544307	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.630	-	-	-	no_errors	PDE3A	HGNC	ENSG00000172572	tier1	-	-	56	0	0.00	51	34	40.00
PHF14	0	genome.wustl.edu	37	7	11030418	11030418	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	11030418	11030418	G	A	SNP	PHF14	ENST00000403050	human	ensembl	74_37	+1	known	missense	c.989	p.S330N	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF14	HGNC	ENSG00000106443	tier1	-	-	82	0	0.00	104	15	12.61
PLAU	0	genome.wustl.edu	37	10	75673432	75673432	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	10	75673432	75673432	G	A	SNP	PLAU	ENST00000372764	human	ensembl	74_37	+1	known	missense	c.596	p.R199K	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Kringle,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PLAU	HGNC	ENSG00000122861				20	0	0.00	24	3	11.11
PLCZ1	0	genome.wustl.edu	37	12	18854523	18854523	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	18854523	18854523	T	G	SNP	PLCZ1	ENST00000538330	human	ensembl	74_37	-1	putative	missense	c.275	p.E92A	0.002	superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_PLipase_C_Pinositol-sp_Y,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCZ1	HGNC	ENSG00000139151	tier1	-	-	31	0	0.00	46	8	14.81
PLG	0	genome.wustl.edu	37	6	161132264	161132264	+	RNA	SNP	A	A	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	161132264	161132264	A	T	SNP	PLG	ENST00000494325	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.023	-	-	-	no_errors	PLG	HGNC	ENSG00000122194	tier1	-	-	146	0	0.00	88	99	52.94
PLOD3	0	genome.wustl.edu	37	7	100860513	100860515	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	100860513	100860515	GCA	-	DEL	PLOD3	ENST00000223127	human	ensembl	74_37	-1	known	in_frame_del	c.43_41	p.L14in_frame_del	0.998:0.985:0.992	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD3	HGNC	ENSG00000106397	tier1			9	0	0.00	4	2	33.33
PLVAP	0	genome.wustl.edu	37	19	17476700	17476700	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	17476700	17476700	C	T	SNP	PLVAP	ENST00000252590	human	ensembl	74_37	-1	known	missense	c.574	p.V192M	0.000	pfam_PV-1	pfam_PV-1	-	no_errors	PLVAP	HGNC	ENSG00000130300	tier1	rs151286294	-	50	0	0.00	48	13	21.31
PLXNB1	0	genome.wustl.edu	37	3	48465421	48465421	+	Nonsense_Mutation	SNP	A	A	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	48465421	48465421	A	T	SNP	PLXNB1	ENST00000296440	human	ensembl	74_37	-1	known	nonsense	c.600	p.Y200*	0.990	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB1	HGNC	ENSG00000164050				23	0	0.00	29	9	23.68
PMP22	0	genome.wustl.edu	37	17	15162444	15162444	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	15162444	15162444	T	G	SNP	PMP22	ENST00000312280	human	ensembl	74_37	-1	known	missense	c.145	p.N49H	0.024	pfam_PMP22/EMP/MP20/Claudin,prints_PMP22	pfam_PMP22/EMP/MP20/Claudin,prints_PMP22,prints_PMP22_EMP_MP20	-	no_errors	PMP22	HGNC	ENSG00000109099	tier1	-	-	52	0	0.00	25	11	30.56
PMPCA	0	genome.wustl.edu	37	9	139310802	139310802	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	9	139310802	139310802	C	T	SNP	PMPCA	ENST00000371717	human	ensembl	74_37	+1	known	missense	c.592	p.R198W	1.000	pfam_Pept_M16_N,superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	PMPCA	HGNC	ENSG00000165688	tier1	-	-	26	0	0.00	34	11	24.44
POSTN	0	genome.wustl.edu	37	13	38159038	38159038	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	13	38159038	38159038	G	T	SNP	POSTN	ENST00000379747	human	ensembl	74_37	-1	known	missense	c.923	p.T308N	0.820	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_FAS1_domain	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_EMI_domain,pfscan_FAS1_domain	-	no_errors	POSTN	HGNC	ENSG00000133110	tier1	-	-	57	0	0.00	69	5	6.76
PPME1	0	genome.wustl.edu	37	11	73936250	73936250	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	73936250	73936250	G	T	SNP	PPME1	ENST00000328257	human	ensembl	74_37	+1	known	missense	c.347	p.G116V	1.000	pirsf_PPase_methylesterase_euk	pirsf_PPase_methylesterase_euk	-	no_errors	PPME1	HGNC	ENSG00000214517	tier1	-	-	27	0	0.00	18	3	14.29
PPP1R1A	0	genome.wustl.edu	37	12	54975838	54975838	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	54975838	54975838	C	T	SNP	PPP1R1A	ENST00000257905	human	ensembl	74_37	-1	known	missense	c.325	p.E109K	0.149	pfam_PPI_1DARPP-32	pfam_PPI_1DARPP-32	-	no_errors	PPP1R1A	HGNC	ENSG00000135447				24	0	0.00	52	3	5.45
PPP2R5B	0	genome.wustl.edu	37	11	64695824	64695824	+	Silent	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	64695824	64695824	C	T	SNP	PPP2R5B	ENST00000164133	human	ensembl	74_37	+1	known	silent	c.649	p.L217	1.000	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5B	HGNC	ENSG00000068971	tier1	-	-	41	0	0.00	39	35	47.30
PRB2	0	genome.wustl.edu	37	12	11546493	11546493	+	Silent	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	11546493	11546493	A	G	SNP	PRB2	ENST00000389362	human	ensembl	74_37	-1	known	silent	c.519	p.S173	0.002	NULL	NULL	-	no_errors	PRB2	HGNC	ENSG00000121335				76	0	0.00	151	8	5.03
PRDM10	0	genome.wustl.edu	37	11	129800980	129800980	+	Silent	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	129800980	129800980	A	G	SNP	PRDM10	ENST00000358825	human	ensembl	74_37	-1	known	silent	c.1461	p.H487	0.055	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PRDM10	HGNC	ENSG00000170325	tier1	-	-	112	0	0.00	90	99	52.38
PRICKLE2	0	genome.wustl.edu	37	3	64084955	64084955	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	64084955	64084955	G	T	SNP	PRICKLE2	ENST00000295902	human	ensembl	74_37	-1	known	missense	c.2307	p.F769L	0.235	NULL	pfam_PET_domain,pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	PRICKLE2	HGNC	ENSG00000163637				27	0	0.00	27	2	6.90
PRMT8	0	genome.wustl.edu	37	12	3692262	3692262	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	3692262	3692262	G	A	SNP	PRMT8	ENST00000382622	human	ensembl	74_37	+1	known	silent	c.867	p.S289	0.454	pfam_Arg_MeTrfase	pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Arg_MeTrfase,pfam_Methyltransf_11,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	PRMT8	HGNC	ENSG00000111218	tier1	-	-	68	0	0.00	12	21	63.64
PRSS37	0	genome.wustl.edu	37	7	141537729	141537729	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	141537729	141537729	C	T	SNP	PRSS37	ENST00000350549	human	ensembl	74_37	-1	known	missense	c.361	p.A121T	0.850	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS37	HGNC	ENSG00000165076	tier1	rs146733171	-	81	0	0.00	100	31	23.66
PSAT1	0	genome.wustl.edu	37	9	80916876	80916876	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	9	80916876	80916876	G	T	SNP	PSAT1	ENST00000376588	human	ensembl	74_37	+1	known	missense	c.128	p.S43I	1.000	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,pirsf_Pser_aminoTfrase,tigrfam_Pser_aminoTfrase_subgr	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,pirsf_Pser_aminoTfrase,tigrfam_Pser_aminoTfrase_subgr	-	no_errors	PSAT1	HGNC	ENSG00000135069				69	0	0.00	57	3	5.00
PSG5	0	genome.wustl.edu	37	19	43683236	43683236	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	43683236	43683236	G	A	SNP	PSG5	ENST00000599812	human	ensembl	74_37	-1	novel	silent	c.504	p.T168	0.017	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG5	HGNC	ENSG00000204941	tier1	-	-	150	0	0.00	161	35	17.86
PTPRR	0	genome.wustl.edu	37	12	71092074	71092074	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	71092074	71092074	G	T	SNP	PTPRR	ENST00000283228	human	ensembl	74_37	-1	known	missense	c.1250	p.T417N	1.000	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Tyr_Pase_rcpt_R/non-rcpt_5,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_KIM-con,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRR	HGNC	ENSG00000153233				43	0	0.00	76	4	5.00
PTPRT	0	genome.wustl.edu	37	20	40739098	40739098	+	Silent	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	20	40739098	40739098	G	T	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	silent	c.3186	p.R1062	0.978	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090	tier1	-	-	20	0	0.00	32	10	23.81
PYROXD1	0	genome.wustl.edu	37	12	21614035	21614035	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	21614035	21614035	A	C	SNP	PYROXD1	ENST00000240651	human	ensembl	74_37	+1	known	missense	c.827	p.K276T	0.452	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,prints_FAD_pyr_nucl-diS_OxRdtase	-	no_errors	PYROXD1	HGNC	ENSG00000121350	tier1	-	-	64	0	0.00	45	20	30.77
RASGRP3	0	genome.wustl.edu	37	2	33749506	33749506	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	33749506	33749506	T	G	SNP	RASGRP3	ENST00000402538	human	ensembl	74_37	+1	known	missense	c.698	p.L233R	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_DAG/PE-bd	-	no_errors	RASGRP3	HGNC	ENSG00000152689	tier1	-	-	52	0	0.00	49	14	22.22
RBM20	0	genome.wustl.edu	37	10	112541506	112541506	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	10	112541506	112541506	G	A	SNP	RBM20	ENST00000369519	human	ensembl	74_37	+1	known	missense	c.1139	p.R380Q	0.215	NULL	smart_Znf_U1,smart_RRM_dom,pfscan_Znf_C2H2_matrin,pfscan_RRM_dom	-	no_errors	RBM20	HGNC	ENSG00000203867	tier1	-	-	55	0	0.00	78	24	23.53
RBMXL1	0	genome.wustl.edu	37	1	89448841	89448841	+	Silent	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	89448841	89448841	T	C	SNP	RBMXL1	ENST00000321792	human	ensembl	74_37	-1	known	silent	c.669	p.R223	1.000	NULL	pfam_RRM_dom,pfam_RBM1CTR,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMXL1	HGNC	ENSG00000213516	tier1	rs150045246	-	107	0	0.00	103	12	10.43
RBMXL1	0	genome.wustl.edu	37	1	89448896	89448896	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	89448896	89448896	A	T	SNP	RBMXL1	ENST00000321792	human	ensembl	74_37	-1	known	missense	c.614	p.V205D	1.000	pfam_RBM1CTR	pfam_RRM_dom,pfam_RBM1CTR,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMXL1	HGNC	ENSG00000213516	tier1	rs200284841	-	81	0	0.00	85	11	11.34
REV3L	0	genome.wustl.edu	37	6	111685107	111685107	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	111685107	111685107	G	A	SNP	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	silent	c.6828	p.Y2276	0.949	pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413	tier1	-	-	90	0	0.00	75	23	23.47
RIMBP2	0	genome.wustl.edu	37	12	130890731	130890731	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	130890731	130890731	C	G	SNP	RIMBP2	ENST00000261655	human	ensembl	74_37	-1	known	missense	c.2983	p.D995H	1.000	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709	tier1	-	-	37	0	0.00	31	10	24.39
RNA28S5	0	genome.wustl.edu	37	GL000220.1	118067	118067	+	RNA	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	GL000220.1	118067	118067	C	T	SNP	RNA28S5	ENST00000607521	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	RNA28S5	HGNC	ENSG00000266658	tier1	-	-	11	0	0.00	22	10	31.25
RNA5-8SP4	0	genome.wustl.edu	37	19	24187248	24187248	+	RNA	SNP	A	A	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	24187248	24187248	A	T	SNP	RNA5-8SP4	ENST00000365096	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RNA5-8SP4	HGNC	ENSG00000201966	tier1	-	-	15	0	0.00	12	8	40.00
RNF43	0	genome.wustl.edu	37	17	56434537	56434537	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	56434537	56434537	G	A	SNP	RNF43	ENST00000581868	human	ensembl	74_37	-1	putative	missense	c.2219	p.S740L	0.027	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF43	HGNC	ENSG00000108375	tier1	-	-	14	0	0.00	24	12	33.33
RPL12P38	0	genome.wustl.edu	37	17	58512502	58512503	+	RNA	DEL	AC	AC	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	58512502	58512503	AC	-	DEL	RPL12P38	ENST00000588627	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.989:0.989	-	-	-	no_errors	RPL12P38	HGNC	ENSG00000213228	tier1			13	0	0.00	19	6	24.00
RPL6P27	0	genome.wustl.edu	37	18	6462419	6462419	+	RNA	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	18	6462419	6462419	G	A	SNP	RPL6P27	ENST00000583065	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	RPL6P27	HGNC	ENSG00000235552	tier1	-	-	15	0	0.00	15	5	25.00
RRH	0	genome.wustl.edu	37	4	110758747	110758747	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	110758747	110758747	A	G	SNP	RRH	ENST00000317735	human	ensembl	74_37	+1	known	missense	c.706	p.I236V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Peropsin	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Peropsin,prints_GPCR_Rhodpsn	-	no_errors	RRH	HGNC	ENSG00000180245	tier1	-	-	38	0	0.00	18	27	60.00
RTN4RL1	0	genome.wustl.edu	37	17	1840387	1840387	+	Silent	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	1840387	1840387	C	T	SNP	RTN4RL1	ENST00000331238	human	ensembl	74_37	-1	known	silent	c.729	p.P243	0.879	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	RTN4RL1	HGNC	ENSG00000185924	tier1	-	-	83	0	0.00	65	17	20.73
RUNX2	0	genome.wustl.edu	37	6	45390460	45390460	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	45390460	45390460	G	A	SNP	RUNX2	ENST00000352853	human	ensembl	74_37	+1	known	silent	c.393	p.Q131	1.000	NULL	pfam_Runt_dom,pfam_RunxI_C_dom,superfamily_p53-like_TF_DNA-bd,pfscan_Runt_dom,prints_AML1_Runt	-	no_errors	RUNX2	HGNC	ENSG00000124813				21	0	0.00	34	5	12.82
RXFP1	0	genome.wustl.edu	37	4	159568033	159568033	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	159568033	159568033	G	A	SNP	RXFP1	ENST00000307765	human	ensembl	74_37	+1	known	nonsense	c.1436	p.W479*	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Gphrmn_rcpt_fam	pfam_GPCR_Rhodpsn,pfam_Leu-rich_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Leu-rich_rpt_typical-subtyp,pfscan_LDrepeatLR_classA_rpt,pfscan_GPCR_Rhodpsn_7TM,prints_Relaxin_rcpt,prints_GPCR_Rhodpsn,prints_Gphrmn_rcpt_fam	-	no_errors	RXFP1	HGNC	ENSG00000171509	tier1	-	-	56	0	0.00	41	12	22.64
RYR2	0	genome.wustl.edu	37	1	237947621	237947621	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	237947621	237947621	G	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	silent	c.12627	p.A4209	0.015	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	30	0	0.00	13	42	76.36
SACS	0	genome.wustl.edu	37	13	23906779	23906779	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	13	23906779	23906779	C	G	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.11236	p.D3746H	1.000	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	tier1	-	-	75	0	0.00	136	28	17.07
SAMD9L	0	genome.wustl.edu	37	7	92760745	92760745	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	92760745	92760745	T	C	SNP	SAMD9L	ENST00000318238	human	ensembl	74_37	-1	known	missense	c.4540	p.K1514E	1.000	NULL	superfamily_SAM/pointed,superfamily_P-loop_NTPase,pfscan_SAM	-	no_errors	SAMD9L	HGNC	ENSG00000177409	tier1	rs150584880	-	34	0	0.00	55	5	8.33
SAT1	0	genome.wustl.edu	37	X	23801895	23801895	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	X	23801895	23801895	C	-	DEL	SAT1	ENST00000379251	human	ensembl	74_37	+1	known	frame_shift_del	c.187	p.L64fs	0.000	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	SAT1	HGNC	ENSG00000130066	tier1			21	0	0.00	17	28	62.22
SCN5A	0	genome.wustl.edu	37	3	38592535	38592535	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	38592535	38592535	G	A	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	silent	c.5328	p.S1776	0.995	pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873	tier1	-	-	55	0	0.00	64	27	29.67
SCN5A	0	genome.wustl.edu	37	3	38592950	38592950	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	38592950	38592950	C	T	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	missense	c.4913	p.R1638Q	0.997	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873	tier1	-	-	35	0	0.00	74	15	16.85
SH3GL3	0	genome.wustl.edu	37	15	84286908	84286908	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	15	84286908	84286908	G	A	SNP	SH3GL3	ENST00000324537	human	ensembl	74_37	+1	known	missense	c.937	p.G313R	1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	pfam_BAR_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	SH3GL3	HGNC	ENSG00000140600	tier1	-	-	38	0	0.00	35	16	31.37
SLC2A14	0	genome.wustl.edu	37	12	7981305	7981305	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	7981305	7981305	G	A	SNP	SLC2A14	ENST00000396589	human	ensembl	74_37	-1	known	missense	c.740	p.T247M	0.000	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,prints_Glc_transpt_3,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A14	HGNC	ENSG00000173262	tier1	-	-	26	0	0.00	23	13	36.11
SLC45A1	0	genome.wustl.edu	37	1	8385415	8385415	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	8385415	8385415	G	T	SNP	SLC45A1	ENST00000377479	human	ensembl	74_37	+1	known	missense	c.557	p.G186V	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A1	HGNC	ENSG00000162426	tier1	-	-	48	0	0.00	57	5	8.06
SLC4A7	0	genome.wustl.edu	37	3	27427485	27427485	+	Silent	SNP	G	G	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	27427485	27427485	G	C	SNP	SLC4A7	ENST00000454389	human	ensembl	74_37	-1	known	silent	c.3390	p.L1130	0.999	tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A7	HGNC	ENSG00000033867	tier1	-	-	68	0	0.00	86	19	18.10
SLC9C1	0	genome.wustl.edu	37	3	111936291	111936291	+	Silent	SNP	T	T	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	111936291	111936291	T	A	SNP	SLC9C1	ENST00000305815	human	ensembl	74_37	-1	known	silent	c.1788	p.S596	0.999	NULL	pfam_Cation/H_exchanger,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	SLC9C1	HGNC	ENSG00000172139	tier1	-	-	59	0	0.00	24	14	36.84
SLITRK3	0	genome.wustl.edu	37	3	164907802	164907802	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	164907802	164907802	G	A	SNP	SLITRK3	ENST00000241274	human	ensembl	74_37	-1	known	nonsense	c.817	p.R273*	0.998	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK3	HGNC	ENSG00000121871	tier1	-	-	41	0	0.00	27	35	56.45
SMIM11	0	genome.wustl.edu	37	21	35774492	35774492	+	RNA	DEL	T	T	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	21	35774492	35774492	T	-	DEL	SMIM11	ENST00000481710	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SMIM11	HGNC	ENSG00000205670	tier1			26	0	0.00	27	9	25.00
SNHG14	0	genome.wustl.edu	37	15	25309958	25309958	+	RNA	SNP	C	C	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	15	25309958	25309958	C	A	SNP	SNHG14	ENST00000549804	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078				8	0	0.00	1	2	66.67
SPAM1	0	genome.wustl.edu	37	7	123594289	123594289	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	123594289	123594289	C	T	SNP	SPAM1	ENST00000340011	human	ensembl	74_37	+1	known	missense	c.665	p.P222L	1.000	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Hyaluronidase	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Hyaluronidase	-	no_errors	SPAM1	HGNC	ENSG00000106304	tier1	-	-	28	0	0.00	19	14	42.42
SPIRE2	0	genome.wustl.edu	37	16	89925754	89925754	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	16	89925754	89925754	G	A	SNP	SPIRE2	ENST00000378247	human	ensembl	74_37	+1	known	missense	c.1454	p.R485Q	0.326	NULL	superfamily_Znf_FYVE_PHD,smart_KIND	-	no_errors	SPIRE2	HGNC	ENSG00000204991	tier1	-	-	25	0	0.00	57	13	18.31
SPTB	0	genome.wustl.edu	37	14	65253572	65253572	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	14	65253572	65253572	T	-	DEL	SPTB	ENST00000389722	human	ensembl	74_37	-1	known	frame_shift_del	c.3111	p.K1037fs	0.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Pleckstrin_homology,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTB	HGNC	ENSG00000070182	tier1			19	0	0.00	23	2	8.00
SPTBN2	0	genome.wustl.edu	37	11	66466512	66466512	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	66466512	66466512	C	T	SNP	SPTBN2	ENST00000309996	human	ensembl	74_37	-1	known	missense	c.3818	p.R1273H	1.000	pirsf_Spectrin_bsu,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN2	HGNC	ENSG00000173898	tier1	-	-	31	0	0.00	33	12	26.67
ST3GAL1	0	genome.wustl.edu	37	8	134478219	134478219	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	8	134478219	134478219	G	A	SNP	ST3GAL1	ENST00000319914	human	ensembl	74_37	-1	known	missense	c.421	p.R141C	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST3GAL1	HGNC	ENSG00000008513	tier1	-	-	29	0	0.00	72	19	20.43
STK32A	0	genome.wustl.edu	37	5	146754657	146754657	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	5	146754657	146754657	G	A	SNP	STK32A	ENST00000397936	human	ensembl	74_37	+1	known	missense	c.908	p.G303D	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK32A	HGNC	ENSG00000169302	tier1	-	-	78	0	0.00	53	18	25.35
SUCO	0	genome.wustl.edu	37	1	172547523	172547523	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	172547523	172547523	G	A	SNP	SUCO	ENST00000608151	human	ensembl	74_37	+1	known	missense	c.1882	p.D628N	1.000	NULL	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	-	no_errors	SUCO	HGNC	ENSG00000094975	tier1	-	-	44	0	0.00	47	10	17.54
SYNE2	0	genome.wustl.edu	37	14	64428292	64428292	+	Silent	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	14	64428292	64428292	A	G	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	silent	c.837	p.A279	0.928	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1	-	-	87	0	0.00	62	24	27.91
SYT11	0	genome.wustl.edu	37	1	155838079	155838079	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	155838079	155838079	G	T	SNP	SYT11	ENST00000368324	human	ensembl	74_37	+1	known	missense	c.358	p.D120Y	0.998	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin	-	no_errors	SYT11	HGNC	ENSG00000132718				40	0	0.00	49	3	5.77
TAF2	0	genome.wustl.edu	37	8	120770358	120770358	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	8	120770358	120770358	T	C	SNP	TAF2	ENST00000378164	human	ensembl	74_37	-1	known	missense	c.2723	p.Q908R	1.000	superfamily_ARM-type_fold	pfam_Peptidase_M1_N,superfamily_ARM-type_fold	-	no_errors	TAF2	HGNC	ENSG00000064313	tier1	-	-	61	0	0.00	70	10	12.50
TAGLN2	0	genome.wustl.edu	37	1	159890152	159890152	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	159890152	159890152	C	T	SNP	TAGLN2	ENST00000368096	human	ensembl	74_37	-1	known	missense	c.211	p.E71K	0.800	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_Calponin_repeat,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain,pfscan_Calponin_repeat,prints_SM22_calponin	-	no_errors	TAGLN2	HGNC	ENSG00000158710	tier1	-	-	31	0	0.00	41	21	33.87
TANGO2	0	genome.wustl.edu	37	22	20040017	20040017	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	22	20040017	20040017	G	T	SNP	TANGO2	ENST00000456048	human	ensembl	74_37	+1	known	missense	c.190	p.G64C	1.000	pfam_DUF833	pfam_DUF833	-	no_errors	TANGO2	HGNC	ENSG00000183597	tier1	-	-	53	0	0.00	41	4	8.89
TANGO2	0	genome.wustl.edu	37	22	20040897	20040897	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	22	20040897	20040897	G	A	SNP	TANGO2	ENST00000450019	human	ensembl	74_37	+1	known	missense	c.280	p.V94M	0.000	pfam_DUF833	pfam_DUF833	-	no_errors	TANGO2	HGNC	ENSG00000183597	tier1	-	-	13	0	0.00	13	5	27.78
TCERG1L	0	genome.wustl.edu	37	10	132944841	132944841	+	Silent	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	10	132944841	132944841	G	A	SNP	TCERG1L	ENST00000368642	human	ensembl	74_37	-1	known	silent	c.1117	p.L373	1.000	superfamily_WW_dom	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1L	HGNC	ENSG00000176769	tier1	-	-	31	0	0.00	45	8	15.09
TCERG1L	0	genome.wustl.edu	37	10	133106472	133106472	+	Splice_Site	SNP	A	A	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	10	133106472	133106472	A	T	SNP	TCERG1L	ENST00000368642	human	ensembl	74_37	-1	known	splice_site	c.670+2	e3+2	0.989	-	-	-	no_errors	TCERG1L	HGNC	ENSG00000176769	tier1	-	-	30	0	0.00	59	10	14.49
TCL6	0	genome.wustl.edu	37	14	96130203	96130203	+	RNA	DEL	T	T	-			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	14	96130203	96130203	T	0	DEL	TCL6	ENST00000352367	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	TCL6	HGNC	ENSG00000187621				9	0	0.00	5	2	28.57
TECRL	0	genome.wustl.edu	37	4	65275035	65275035	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	65275035	65275035	C	T	SNP	TECRL	ENST00000381210	human	ensembl	74_37	-1	known	missense	c.35	p.R12H	0.919	NULL	pfam_3-oxo-5_a-steroid_4-DH_C,pfscan_3-oxo-5_a-steroid_4-DH_C	-	no_errors	TECRL	HGNC	ENSG00000205678	tier1	-	-	42	0	0.00	46	19	29.23
TGOLN2	0	genome.wustl.edu	37	2	85553791	85553791	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	85553791	85553791	C	T	SNP	TGOLN2	ENST00000377386	human	ensembl	74_37	-1	known	missense	c.1064	p.R355H	0.000	NULL	NULL	-	no_errors	TGOLN2	HGNC	ENSG00000152291	tier1	-	-	63	0	0.00	47	46	49.46
THBD	0	genome.wustl.edu	37	20	23028817	23028817	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	20	23028817	23028817	A	C	SNP	THBD	ENST00000377103	human	ensembl	74_37	-1	known	missense	c.1325	p.I442S	0.986	pirsf_CD93/CD141,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom	pirsf_CD93/CD141,pfam_Tme5_EGF-like,pfam_EGF-like_Ca-bd_dom,superfamily_C-type_lectin_fold,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,prints_Thrombomodulin,pfscan_C-type_lectin	-	no_errors	THBD	HGNC	ENSG00000178726	tier1	-	-	52	0	0.00	78	24	23.53
TIAM2	0	genome.wustl.edu	37	6	155458470	155458470	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	155458470	155458470	G	A	SNP	TIAM2	ENST00000456144	human	ensembl	74_37	+1	known	missense	c.1354	p.D452N	1.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,superfamily_HR1_rho-bd,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM2	HGNC	ENSG00000146426	tier1	-	-	40	0	0.00	28	15	34.88
TMEM108	0	genome.wustl.edu	37	3	133099114	133099114	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	133099114	133099114	C	A	SNP	TMEM108	ENST00000321871	human	ensembl	74_37	+1	known	missense	c.559	p.P187T	0.000	NULL	NULL	-	no_errors	TMEM108	HGNC	ENSG00000144868	tier1	-	-	8	0	0.00	17	14	45.16
TMEM17	0	genome.wustl.edu	37	2	62728353	62728353	+	Silent	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	62728353	62728353	T	C	SNP	TMEM17	ENST00000335390	human	ensembl	74_37	-1	known	silent	c.588	p.E196	1.000	NULL	pfam_Uncharacterised_TM-17	-	no_errors	TMEM17	HGNC	ENSG00000186889	tier1	-	-	63	0	0.00	109	22	16.79
TMEM206	0	genome.wustl.edu	37	1	212553243	212553243	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	212553243	212553243	A	C	SNP	TMEM206	ENST00000535273	human	ensembl	74_37	-1	known	missense	c.815	p.L272R	1.000	NULL	NULL	-	no_errors	TMEM206	HGNC	ENSG00000065600				34	0	0.00	56	4	6.67
TMEM74	0	genome.wustl.edu	37	8	109797149	109797149	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	8	109797149	109797149	A	C	SNP	TMEM74	ENST00000297459	human	ensembl	74_37	-1	known	missense	c.179	p.L60R	0.000	NULL	NULL	-	no_errors	TMEM74	HGNC	ENSG00000164841	tier1	-	-	55	0	0.00	28	29	50.88
TMF1	0	genome.wustl.edu	37	3	69079117	69079117	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	69079117	69079117	G	A	SNP	TMF1	ENST00000543976	human	ensembl	74_37	-1	known	missense	c.2452	p.R818C	1.000	NULL	pfam_TMF_TATA-bd,pfam_TMF_DNA-bd	-	no_errors	TMF1	HGNC	ENSG00000144747				21	0	0.00	16	2	11.11
TMPRSS9	0	genome.wustl.edu	37	19	2422216	2422216	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	2422216	2422216	C	T	SNP	TMPRSS9	ENST00000332578	human	ensembl	74_37	+1	known	missense	c.2417	p.P806L	0.003	pirsf_Pept_S1A_polyserase-1	pirsf_Pept_S1A_polyserase-1,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,pfam_LDrepeatLR_classA_rpt,superfamily_Trypsin-like_Pept_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1	-	no_errors	TMPRSS9	HGNC	ENSG00000178297	tier1	-	-	33	0	0.00	31	45	58.44
TP53	0	genome.wustl.edu	37	17	7577548	7577548	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	7577548	7577548	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.733	p.G245S	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934575	-	65	0	0.00	17	38	67.86
TPTE	0	genome.wustl.edu	37	21	10920111	10920111	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	21	10920111	10920111	T	A	SNP	TPTE	ENST00000361285	human	ensembl	74_37	-1	known	missense	c.1143	p.K381N	0.893	pfam_Dual-sp_phosphatase_cat-dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Ion_trans_dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE	HGNC	ENSG00000166157	tier1	-	-	207	0	0.00	154	39	20.21
TRMU	0	genome.wustl.edu	37	22	46751484	46751484	+	Silent	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	22	46751484	46751484	A	G	SNP	TRMU	ENST00000290846	human	ensembl	74_37	+1	known	silent	c.1017	p.L339	1.000	pfam_tRNA-specific_2-thiouridylase,tigrfam_tRNA-specific_2-thiouridylase	pfam_tRNA-specific_2-thiouridylase,pfam_ThiI_C_dom,pfam_NAD/GMP_synthase,tigrfam_tRNA-specific_2-thiouridylase	-	no_errors	TRMU	HGNC	ENSG00000100416	tier1	-	-	34	0	0.00	42	17	28.81
TSG101	0	genome.wustl.edu	37	11	18502114	18502114	+	Silent	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	18502114	18502114	G	T	SNP	TSG101	ENST00000251968	human	ensembl	74_37	-1	known	silent	c.1152	p.A384	0.256	NULL	pfam_UEV_N,pfam_Steadiness_box,superfamily_UBQ-conjugating_enzyme/RWD	-	no_errors	TSG101	HGNC	ENSG00000074319				44	0	0.00	37	3	7.50
TTN	0	genome.wustl.edu	37	2	179539829	179539829	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	179539829	179539829	G	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.30646	p.P10216A	0.998	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	46	0	0.00	44	17	27.87
TYRO3	0	genome.wustl.edu	37	15	41862356	41862356	+	Splice_Site	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	15	41862356	41862356	T	C	SNP	TYRO3	ENST00000263798	human	ensembl	74_37	+1	known	splice_site	c.1382+2	e10+2	1.000	-	-	-	no_errors	TYRO3	HGNC	ENSG00000092445				28	0	0.00	44	5	10.20
TYRO3	0	genome.wustl.edu	37	15	41865875	41865875	+	Splice_Site	SNP	A	A	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	15	41865875	41865875	A	T	SNP	TYRO3	ENST00000263798	human	ensembl	74_37	+1	known	splice_site	c.2146-2	e18-2	1.000	-	-	-	no_errors	TYRO3	HGNC	ENSG00000092445				31	0	0.00	35	6	14.63
UBR4	0	genome.wustl.edu	37	1	19486660	19486660	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	19486660	19486660	G	T	SNP	UBR4	ENST00000375267	human	ensembl	74_37	-1	known	missense	c.5522	p.A1841D	1.000	superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR4	HGNC	ENSG00000127481	tier1	-	-	33	0	0.00	22	22	50.00
UBR5	0	genome.wustl.edu	37	8	103269913	103269913	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	8	103269913	103269913	G	A	SNP	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	missense	c.8134	p.R2712C	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517	tier1	-	-	44	0	0.00	36	120	76.92
UGT2B11	0	genome.wustl.edu	37	4	70080140	70080140	+	Silent	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	4	70080140	70080140	G	T	SNP	UGT2B11	ENST00000446444	human	ensembl	74_37	-1	known	silent	c.301	p.R101	0.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2B11	HGNC	ENSG00000213759				70	0	0.00	57	3	5.00
UNC5D	0	genome.wustl.edu	37	8	35616888	35616888	+	Silent	SNP	A	A	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	8	35616888	35616888	A	G	SNP	UNC5D	ENST00000404895	human	ensembl	74_37	+1	known	silent	c.2214	p.P738	0.999	NULL	pfam_ZU5,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Death_domain,pfam_Immunoglobulin,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5D	HGNC	ENSG00000156687	tier1	-	-	53	0	0.00	27	29	51.79
UNC93B1	0	genome.wustl.edu	37	11	67759316	67759316	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	67759316	67759316	C	T	SNP	UNC93B1	ENST00000227471	human	ensembl	74_37	-1	known	missense	c.1492	p.V498M	0.997	NULL	pfam_Ion_channel_UNC-93,superfamily_MFS_dom_general_subst_transpt	-	no_errors	UNC93B1	HGNC	ENSG00000110057				23	0	0.00	55	4	6.78
USP29	0	genome.wustl.edu	37	19	57642310	57642310	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	57642310	57642310	G	A	SNP	USP29	ENST00000254181	human	ensembl	74_37	+1	known	missense	c.2267	p.R756K	0.001	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP29	HGNC	ENSG00000131864	tier1	-	-	24	0	0.00	36	15	29.41
USP31	0	genome.wustl.edu	37	16	23093862	23093862	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	16	23093862	23093862	G	T	SNP	USP31	ENST00000219689	human	ensembl	74_37	-1	known	missense	c.1847	p.A616D	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP31	HGNC	ENSG00000103404	tier1	-	-	32	0	0.00	16	17	51.52
USP35	0	genome.wustl.edu	37	11	77924720	77924720	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	11	77924720	77924720	C	T	SNP	USP35	ENST00000529308	human	ensembl	74_37	+1	known	missense	c.2918	p.A973V	0.761	NULL	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP35	HGNC	ENSG00000118369	tier1	-	-	31	0	0.00	29	21	41.18
USP42	0	genome.wustl.edu	37	7	6183719	6183719	+	Silent	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	6183719	6183719	T	C	SNP	USP42	ENST00000306177	human	ensembl	74_37	+1	known	silent	c.882	p.C294	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP42	HGNC	ENSG00000106346	tier1	-	-	92	0	0.00	154	18	10.47
USP6	0	genome.wustl.edu	37	17	5042962	5042962	+	Silent	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	17	5042962	5042962	C	T	SNP	USP6	ENST00000250066	human	ensembl	74_37	+1	known	silent	c.1491	p.C497	0.001	NULL	pfam_Peptidase_C19/C67,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Peptidase_C19/C67	-	no_errors	USP6	HGNC	ENSG00000129204	tier1	-	-	53	0	0.00	17	42	68.85
UTS2B	0	genome.wustl.edu	37	3	190995876	190995876	+	Silent	SNP	T	T	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	3	190995876	190995876	T	G	SNP	UTS2B	ENST00000446788	human	ensembl	74_37	-1	known	silent	c.187	p.R63	0.015	NULL	NULL	-	no_errors	UTS2B	HGNC	ENSG00000188958	tier1	-	-	82	0	0.00	68	18	20.93
VN1R2	0	genome.wustl.edu	37	19	53761767	53761767	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	53761767	53761767	G	A	SNP	VN1R2	ENST00000341702	human	ensembl	74_37	+1	known	missense	c.139	p.G47S	0.025	NULL	pfam_Vmron_rcpt_1,pfam_GPCR_Rhodpsn,pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM,prints_Vmron_rcpt_1	-	no_errors	VN1R2	HGNC	ENSG00000196131	tier1	rs111541974	-	23	0	0.00	36	18	33.33
VPS33A	0	genome.wustl.edu	37	12	122750679	122750680	+	RNA	INS	-	-	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	12	122750679	122750680	-	C	INS	VPS33A	ENST00000542310	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	VPS33A	HGNC	ENSG00000139719	tier1			8	0	0.00	11	4	26.67
VWA3B	0	genome.wustl.edu	37	2	98851174	98851174	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	2	98851174	98851174	A	T	SNP	VWA3B	ENST00000477737	human	ensembl	74_37	+1	known	missense	c.2372	p.E791V	0.000	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA3B	HGNC	ENSG00000168658	tier1	-	-	54	0	0.00	58	16	21.62
WDFY4	0	genome.wustl.edu	37	10	49951287	49951287	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	10	49951287	49951287	T	C	SNP	WDFY4	ENST00000325239	human	ensembl	74_37	+1	known	missense	c.2153	p.L718P	1.000	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY4	HGNC	ENSG00000128815	tier1	-	-	23	0	0.00	30	8	21.05
WDR72	0	genome.wustl.edu	37	15	53907630	53907630	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	15	53907630	53907630	C	T	SNP	WDR72	ENST00000360509	human	ensembl	74_37	-1	known	missense	c.2773	p.V925I	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR72	HGNC	ENSG00000166415	tier1	-	-	29	0	0.00	21	19	47.50
ZIM3	0	genome.wustl.edu	37	19	57648269	57648269	+	Silent	SNP	T	T	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	57648269	57648269	T	C	SNP	ZIM3	ENST00000269834	human	ensembl	74_37	-1	known	silent	c.213	p.E71	0.000	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZIM3	HGNC	ENSG00000141946	tier1	-	-	79	0	0.00	113	20	15.04
ZMYM6	0	genome.wustl.edu	37	1	35485185	35485185	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	1	35485185	35485185	C	T	SNP	ZMYM6	ENST00000357182	human	ensembl	74_37	-1	known	missense	c.197	p.G66D	1.000	NULL	pfam_Znf_MYM,superfamily_RNaseH-like_dom,smart_TRASH_dom	-	no_errors	ZMYM6	HGNC	ENSG00000163867	tier1	-	-	27	0	0.00	32	6	15.79
ZNF275	0	genome.wustl.edu	37	X	152613161	152613161	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	X	152613161	152613161	G	A	SNP	ZNF275	ENST00000440091	human	ensembl	74_37	+1	known	missense	c.1108	p.A370T	0.933	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF275	HGNC	ENSG00000063587	tier1	-	-	29	0	0.00	2	39	95.12
ZNF276	0	genome.wustl.edu	37	16	89804219	89804219	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	16	89804219	89804219	C	T	SNP	ZNF276	ENST00000443381	human	ensembl	74_37	+1	known	missense	c.1480	p.R494W	1.000	pfscan_Znf_C2H2	pfam_Znf_AD,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF276	HGNC	ENSG00000158805	tier1	-	-	62	0	0.00	69	21	23.08
ZNF28	0	genome.wustl.edu	37	19	53303155	53303155	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	53303155	53303155	G	A	SNP	ZNF28	ENST00000457749	human	ensembl	74_37	-1	known	missense	c.1943	p.S648L	0.005	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF28	HGNC	ENSG00000198538	tier1	-	-	87	0	0.00	127	23	15.33
ZNF292	0	genome.wustl.edu	37	6	87966408	87966408	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	6	87966408	87966408	T	A	SNP	ZNF292	ENST00000369577	human	ensembl	74_37	+1	known	missense	c.3061	p.L1021I	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994	tier1	-	-	35	0	0.00	16	12	42.86
ZNF440	0	genome.wustl.edu	37	19	11941178	11941178	+	Silent	SNP	C	C	T			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	11941178	11941178	C	T	SNP	ZNF440	ENST00000304060	human	ensembl	74_37	+1	known	silent	c.84	p.L28	0.779	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF440	HGNC	ENSG00000171295	tier1	-	-	134	0	0.00	99	40	28.78
ZNF566	0	genome.wustl.edu	37	19	36939893	36939893	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	36939893	36939893	T	G	SNP	ZNF566	ENST00000392170	human	ensembl	74_37	-1	known	missense	c.1246	p.N416H	1.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF566	HGNC	ENSG00000186017	tier1	-	-	45	0	0.00	46	15	24.59
ZNF623	0	genome.wustl.edu	37	8	144732067	144732067	+	Splice_Site	SNP	G	G	C			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	8	144732067	144732067	G	C	SNP	ZNF623	ENST00000458270	human	ensembl	74_37	+1	known	splice_site	c.1-1	e1-1	0.995	-	-	-	no_errors	ZNF623	HGNC	ENSG00000183309	tier1	-	-	30	0	0.00	50	12	19.35
ZNF681	0	genome.wustl.edu	37	19	23927603	23927603	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	19	23927603	23927603	C	G	SNP	ZNF681	ENST00000402377	human	ensembl	74_37	-1	known	missense	c.749	p.R250T	0.820	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF681	HGNC	ENSG00000196172	tier1	-	-	81	0	0.00	39	46	54.12
ZNF736	0	genome.wustl.edu	37	7	63808677	63808677	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43I-01A-11D-A247-09	TCGA-L5-A43I-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	635a8384-40d5-4c35-9158-dae828f2e500	93b3f33a-3f0b-4e16-9f0f-16370129bfe6	7	63808677	63808677	C	A	SNP	ZNF736	ENST00000355095	human	ensembl	74_37	+1	known	missense	c.436	p.Q146K	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF736	HGNC	ENSG00000234444	tier1	-	-	33	0	0.00	40	40	50.00
