Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
A2M	0	genome.wustl.edu	37	12	9252079	9252079	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	9252079	9252079	G	A	SNP	A2M	ENST00000318602	human	ensembl	74_37	-1	known	silent	c.1599	p.D533	0.998	pfam_A2M_N_2	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,superfamily_Beta-lactam/transpept-like,superfamily_Cupredoxin	-	no_errors	A2M	HGNC	ENSG00000175899	tier1	-	-	29	0	0.00	30	12	28.57
AADACL3	0	genome.wustl.edu	37	1	12785494	12785494	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	12785494	12785494	G	-	DEL	AADACL3	ENST00000359318	human	ensembl	74_37	+1	known	frame_shift_del	c.584	p.C195fs	0.040	NULL	pfam_AB_hydrolase_3	-	no_errors	AADACL3	HGNC	ENSG00000188984	tier1			31	0	0.00	21	17	44.74
AAK1	0	genome.wustl.edu	37	2	69741763	69741765	+	In_Frame_Del	DEL	TGC	TGC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TGC	TGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	69741763	69741765	TGC	-	DEL	AAK1	ENST00000409085	human	ensembl	74_37	-1	known	in_frame_del	c.1616_1614	p.Q542in_frame_del	1.000:1.000:0.998	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	AAK1	HGNC	ENSG00000115977	tier1			77	0	0.00	103	14	11.97
AARS2	0	genome.wustl.edu	37	6	44269193	44269193	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	44269193	44269193	C	-	DEL	AARS2	ENST00000244571	human	ensembl	74_37	-1	known	frame_shift_del	c.2607	p.T871fs	0.008	tigrfam_Ala-tRNA-lgiase_IIc	pfam_Ala-tRNA-synth_IIc_N,pfam_tRNA_SAD,superfamily_Ala-tRNA-ligase_IIc_anticod-bd,superfamily_Thr/Ala-tRNA-synth_IIc_edit,smart_tRNA_SAD,prints_Ala-tRNA-lgiase_IIc,pfscan_Ala-tRNA-synth_IIc_core,tigrfam_Ala-tRNA-lgiase_IIc	-	no_errors	AARS2	HGNC	ENSG00000124608	tier1			54	0	0.00	41	18	30.51
ABCA1	0	genome.wustl.edu	37	9	107587912	107587912	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	107587912	107587912	A	G	SNP	ABCA1	ENST00000494467	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.334	-	-	-	no_errors	ABCA1	HGNC	ENSG00000165029	tier1	-	-	41	0	0.00	8	21	72.41
ABCA4	0	genome.wustl.edu	37	1	94506867	94506867	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	94506867	94506867	G	T	SNP	ABCA4	ENST00000370225	human	ensembl	74_37	-1	known	nonsense	c.3420	p.C1140*	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Rim_ABC_transpt	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Rim_ABC_transpt	-	no_errors	ABCA4	HGNC	ENSG00000198691	tier1	-	-	72	0	0.00	42	58	58.00
ABCB1	0	genome.wustl.edu	37	7	87214954	87214954	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	87214954	87214954	C	T	SNP	ABCB1	ENST00000265724	human	ensembl	74_37	-1	known	missense	c.160	p.G54R	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB1	HGNC	ENSG00000085563	tier1	-	-	35	0	0.00	19	6	24.00
ABCB4	0	genome.wustl.edu	37	7	87074282	87074282	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	87074282	87074282	A	-	DEL	ABCB4	ENST00000265723	human	ensembl	74_37	-1	known	frame_shift_del	c.1015	p.S339fs	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB4	HGNC	ENSG00000005471	tier1			25	0	0.00	35	15	30.00
ABCC11	0	genome.wustl.edu	37	16	48218359	48218359	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	48218359	48218359	C	T	SNP	ABCC11	ENST00000356608	human	ensembl	74_37	-1	known	missense	c.3250	p.V1084M	0.074	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC11	HGNC	ENSG00000121270	tier1	-	-	35	0	0.00	43	12	21.82
ABCC4	0	genome.wustl.edu	37	13	95696016	95696016	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	95696016	95696016	T	-	DEL	ABCC4	ENST00000376887	human	ensembl	74_37	-1	known	frame_shift_del	c.3655	p.I1219fs	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM	-	no_errors	ABCC4	HGNC	ENSG00000125257	tier1			46	0	0.00	66	13	16.46
ABCD2	0	genome.wustl.edu	37	12	39947725	39947725	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	39947725	39947725	C	T	SNP	ABCD2	ENST00000308666	human	ensembl	74_37	-1	known	missense	c.2212	p.E738K	0.407	NULL	pfam_ABC_Peroxi_TM,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCD2	HGNC	ENSG00000173208	tier1	-	-	46	0	0.00	15	21	58.33
ABHD16B	0	genome.wustl.edu	37	20	62494101	62494101	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	62494101	62494101	C	T	SNP	ABHD16B	ENST00000369916	human	ensembl	74_37	+1	known	missense	c.1208	p.A403V	0.002	NULL	pfam_AB_hydrolase_1	-	no_errors	ABHD16B	HGNC	ENSG00000183260				28	0	0.00	39	6	13.33
ABLIM1	0	genome.wustl.edu	37	10	116203872	116203872	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	116203872	116203872	A	G	SNP	ABLIM1	ENST00000277895	human	ensembl	74_37	-1	known	silent	c.1849	p.L617	1.000	NULL	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM1	HGNC	ENSG00000099204	tier1	-	-	41	0	0.00	33	15	31.25
ABR	0	genome.wustl.edu	37	17	910416	910416	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	910416	910416	C	T	SNP	ABR	ENST00000302538	human	ensembl	74_37	-1	known	missense	c.2479	p.V827I	1.000	superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_DH-domain,superfamily_C2_dom,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RhoGAP_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom,pfscan_DH-domain	-	no_errors	ABR	HGNC	ENSG00000159842	tier1	rs111816976	-	26	0	0.00	28	25	47.17
ACAT1	0	genome.wustl.edu	37	11	108004588	108004588	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	108004588	108004588	T	-	DEL	ACAT1	ENST00000265838	human	ensembl	74_37	+1	known	frame_shift_del	c.162	p.L56fs	1.000	pfam_Thiolase_N,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	pfam_Thiolase_N,pfam_Thiolase_C,pfam_Ketoacyl_synth_N,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	-	no_errors	ACAT1	HGNC	ENSG00000075239	tier1			69	0	0.00	78	19	19.59
ACOX3	0	genome.wustl.edu	37	4	8398737	8398737	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	8398737	8398737	C	T	SNP	ACOX3	ENST00000356406	human	ensembl	74_37	-1	known	missense	c.983	p.R328H	0.997	pfam_AcylCo_DH/oxidase_C,superfamily_AcylCo_DH/oxidase_C,pirsf_Acyl-CoA_oxidase	pfam_Acyl-CoA_oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_AcylCo_DH/oxidase_C,superfamily_AcylCo_DH/oxidase_C,superfamily_AcylCoA_DH/oxidase_NM_dom,pirsf_Acyl-CoA_oxidase	-	no_errors	ACOX3	HGNC	ENSG00000087008	tier1	-	-	54	0	0.00	34	52	60.47
ACSM2A	0	genome.wustl.edu	37	16	20491948	20491948	+	Silent	SNP	A	A	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	20491948	20491948	A	C	SNP	ACSM2A	ENST00000219054	human	ensembl	74_37	+1	known	silent	c.1335	p.G445	0.999	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM2A	HGNC	ENSG00000183747	tier1	-	-	57	0	0.00	33	56	62.92
ACSS2	0	genome.wustl.edu	37	20	33496668	33496671	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	33496668	33496671	AAAA	-	DEL	ACSS2	ENST00000497927	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005:0.007:0.007:0.006	-	-	-	no_errors	ACSS2	HGNC	ENSG00000131069	tier1			29	0	0.00	41	22	34.92
ACVR2A	0	genome.wustl.edu	37	2	148677866	148677866	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	148677866	148677866	G	A	SNP	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	missense	c.1030	p.A344T	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989	tier1	-	-	18	0	0.00	19	8	29.63
ACVR2A	0	genome.wustl.edu	37	2	148683686	148683686	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	148683686	148683686	A	-	DEL	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	frame_shift_del	c.1303	p.K437fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989	tier1			44	0	0.00	52	22	29.73
ADAD1	0	genome.wustl.edu	37	4	123342535	123342535	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	123342535	123342535	A	G	SNP	ADAD1	ENST00000296513	human	ensembl	74_37	+1	known	missense	c.1607	p.H536R	1.000	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADAD1	HGNC	ENSG00000164113	tier1	-	-	35	0	0.00	17	7	29.17
ADAM19	0	genome.wustl.edu	37	5	156946869	156946869	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	156946869	156946869	T	C	SNP	ADAM19	ENST00000394020	human	ensembl	74_37	-1	known	missense	c.584	p.Q195R	0.995	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM19	HGNC	ENSG00000135074	tier1	-	-	49	0	0.00	51	16	23.88
ADAM21P1	0	genome.wustl.edu	37	14	70714016	70714016	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	70714016	70714016	G	A	SNP	ADAM21P1	ENST00000530196	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.174	-	-	-	no_errors	ADAM21P1	HGNC	ENSG00000235812	tier1	-	-	21	0	0.00	6	37	86.05
ADAM21P1	0	genome.wustl.edu	37	14	70714259	70714259	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	70714259	70714259	A	G	SNP	ADAM21P1	ENST00000530196	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	ADAM21P1	HGNC	ENSG00000235812				23	0	0.00	60	6	9.09
ADAM23	0	genome.wustl.edu	37	2	207460860	207460861	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	207460860	207460861	-	C	INS	ADAM23	ENST00000264377	human	ensembl	74_37	+1	known	frame_shift_ins	c.2333_2334	p.K781fs	0.005:0.000	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM23	HGNC	ENSG00000114948	tier1			40	0	0.00	63	15	19.23
ADAMTS15	0	genome.wustl.edu	37	11	130343039	130343039	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	130343039	130343039	C	A	SNP	ADAMTS15	ENST00000299164	human	ensembl	74_37	+1	known	missense	c.2176	p.L726M	1.000	pfam_ADAM_spacer1	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS,prints_Pept_M12B_ADAM-TS8	-	no_errors	ADAMTS15	HGNC	ENSG00000166106	tier1	-	-	26	0	0.00	42	15	26.32
ADAMTSL1	0	genome.wustl.edu	37	9	18680349	18680350	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	18680349	18680350	-	G	INS	ADAMTSL1	ENST00000327883	human	ensembl	74_37	+1	known	frame_shift_ins	c.1176_1177	p.I395fs	1.000:1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,pfam_ADAM_spacer1,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_Thrombospondin_1_rpt	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031	tier1			28	0	0.00	59	13	18.06
ADAP2	0	genome.wustl.edu	37	17	29261308	29261308	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	29261308	29261308	A	C	SNP	ADAP2	ENST00000330889	human	ensembl	74_37	+1	known	missense	c.503	p.K168T	0.935	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_ArfGAP,pfam_Pleckstrin_homology,smart_ArfGAP,smart_Pleckstrin_homology,prints_ArfGAP,pfscan_Pleckstrin_homology,pfscan_ArfGAP	-	no_errors	ADAP2	HGNC	ENSG00000184060	tier1	-	-	37	0	0.00	22	34	60.71
ADC	0	genome.wustl.edu	37	1	33562406	33562406	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	33562406	33562406	C	T	SNP	ADC	ENST00000373441	human	ensembl	74_37	+1	known	silent	c.852	p.A284	0.998	superfamily_Ala_racemase/Decarboxylase_C,prints_Orn/DAP/Arg_de-COase	pfam_De-COase2_N,pfam_De-COase2_C,superfamily_Ala_racemase/Decarboxylase_C,prints_Orn_de-COase,prints_Orn/DAP/Arg_de-COase	-	no_errors	ADC	HGNC	ENSG00000142920	tier1	-	-	36	0	0.00	58	35	37.63
ADH7	0	genome.wustl.edu	37	4	100340170	100340170	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	100340170	100340170	G	A	SNP	ADH7	ENST00000209665	human	ensembl	74_37	-1	known	missense	c.970	p.R324C	0.996	pfam_ADH_C	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like	-	no_errors	ADH7	HGNC	ENSG00000196344	tier1	-	-	52	0	0.00	27	13	32.50
ADNP	0	genome.wustl.edu	37	20	49508204	49508204	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	49508204	49508204	T	-	DEL	ADNP	ENST00000349014	human	ensembl	74_37	-1	known	frame_shift_del	c.3047	p.K1016fs	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ADNP	HGNC	ENSG00000101126	tier1			71	0	0.00	50	48	48.98
AFAP1L2	0	genome.wustl.edu	37	10	116054776	116054777	+	RNA	DEL	AA	AA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	116054776	116054777	AA	-	DEL	AFAP1L2	ENST00000491814	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AFAP1L2	HGNC	ENSG00000169129	tier1			22	0	0.00	31	5	13.89
AGL	0	genome.wustl.edu	37	1	100378027	100378028	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	100378027	100378028	-	A	INS	AGL	ENST00000294724	human	ensembl	74_37	+1	known	frame_shift_ins	c.3903_3904	p.N1303fs	0.021:0.023	pfam_AGL/Gdb1,superfamily_6-hairpin_glycosidase-like,tigrfam_Glycogen_debranch_met	pfam_AGL/Gdb1,superfamily_6-hairpin_glycosidase-like,superfamily_Glycoside_hydrolase_SF,tigrfam_Glycogen_debranch_met	-	no_errors	AGL	HGNC	ENSG00000162688	tier1			56	0	0.00	34	28	45.16
AGPAT1	0	genome.wustl.edu	37	6	32138784	32138784	+	Silent	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	32138784	32138784	C	A	SNP	AGPAT1	ENST00000336984	human	ensembl	74_37	-1	known	silent	c.264	p.G88	1.000	pfam_Plipid/glycerol_acylTrfase,tigrfam_AGP_acyltrans	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase,tigrfam_AGP_acyltrans	-	no_errors	AGPAT1	HGNC	ENSG00000204310	tier1	-	-	29	0	0.00	20	10	33.33
AHNAK2	0	genome.wustl.edu	37	14	105411968	105411968	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	105411968	105411968	T	C	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.9820	p.M3274V	0.001	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				81	0	0.00	192	13	6.34
AHNAK2	0	genome.wustl.edu	37	14	105411976	105411976	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	105411976	105411976	T	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.9812	p.Q3271L	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				73	0	0.00	188	11	5.53
AHNAK2	0	genome.wustl.edu	37	14	105412925	105412925	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	105412925	105412925	G	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	silent	c.8863	p.L2955	0.048	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				66	0	0.00	148	20	11.90
AHNAK2	0	genome.wustl.edu	37	14	105412929	105412929	+	Silent	SNP	T	T	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	105412929	105412929	T	G	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	silent	c.8859	p.A2953	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				70	0	0.00	144	23	13.77
AHNAK2	0	genome.wustl.edu	37	14	105412934	105412934	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	105412934	105412934	T	C	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.8854	p.R2952G	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				65	0	0.00	136	21	13.38
AHNAK2	0	genome.wustl.edu	37	14	105412935	105412935	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	105412935	105412935	C	T	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	silent	c.8853	p.P2951	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				66	0	0.00	140	19	11.88
AHSA2	0	genome.wustl.edu	37	2	61406203	61406203	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	61406203	61406203	C	T	SNP	AHSA2	ENST00000489653	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.606	-	-	-	no_errors	AHSA2	HGNC	ENSG00000173209	tier1	-	-	30	0	0.00	43	22	33.85
AIMP2	0	genome.wustl.edu	37	7	6062967	6062967	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	6062967	6062967	C	T	SNP	AIMP2	ENST00000223029	human	ensembl	74_37	+1	known	missense	c.608	p.T203M	0.972	NULL	superfamily_Glutathione-S-Trfase_C-like	-	no_errors	AIMP2	HGNC	ENSG00000106305	tier1	-	-	65	0	0.00	62	40	39.22
AK9	0	genome.wustl.edu	37	6	109850199	109850201	+	In_Frame_Del	DEL	AAC	AAC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AAC	AAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	109850199	109850201	AAC	-	DEL	AK9	ENST00000355283	human	ensembl	74_37	-1	novel	in_frame_del	c.885_883	p.V295in_frame_del	0.003:0.000:0.000	NULL	pfam_Adenylate_kin,pfam_YHS_dom,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase	-	no_errors	AK9	HGNC	ENSG00000155085	tier1			48	0	0.00	54	5	8.47
AKAP7	0	genome.wustl.edu	37	6	131481276	131481276	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	131481276	131481276	A	-	DEL	AKAP7	ENST00000368123	human	ensembl	74_37	+1	known	frame_shift_del	c.163	p.K57fs	0.449	pfam_Kinase-A_anchor_nucl_local_sig	pfam_Kinase-A_anchor_nucl_local_sig,pfam_Kinase-A_anchor_RI-RII-bd_dom,superfamily_RNA_ligase/cNuc_Pdiesterase	-	no_errors	AKAP7	HGNC	ENSG00000118507	tier1			43	0	0.00	39	10	20.41
AKT1	0	genome.wustl.edu	37	14	105246502	105246502	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	105246502	105246502	C	T	SNP	AKT1	ENST00000349310	human	ensembl	74_37	-1	known	missense	c.98	p.G33D	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom	-	no_errors	AKT1	HGNC	ENSG00000142208	tier1	-	-	41	0	0.00	103	12	10.43
ALDOB	0	genome.wustl.edu	37	9	104189797	104189797	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	104189797	104189797	G	A	SNP	ALDOB	ENST00000374855	human	ensembl	74_37	-1	known	silent	c.507	p.N169	0.521	pfam_Aldolase_I	pfam_Aldolase_I	-	no_errors	ALDOB	HGNC	ENSG00000136872	tier1	-	-	25	0	0.00	51	18	26.09
ALOX12B	0	genome.wustl.edu	37	17	7979514	7979514	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	7979514	7979514	G	A	SNP	ALOX12B	ENST00000319144	human	ensembl	74_37	-1	known	missense	c.1511	p.A504V	0.210	pfam_LipOase_C,superfamily_LipOase_C	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_C,prints_LipOase_mml	-	no_errors	ALOX12B	HGNC	ENSG00000179477	tier1	rs141010860	-	28	0	0.00	24	26	52.00
ALPP	0	genome.wustl.edu	37	2	233245388	233245388	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	233245388	233245388	C	T	SNP	ALPP	ENST00000392027	human	ensembl	74_37	+1	known	silent	c.921	p.D307	0.994	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase,prints_Alkaline_phosphatase	-	no_errors	ALPP	HGNC	ENSG00000163283	tier1	-	-	77	0	0.00	106	25	19.08
AMY1C	0	genome.wustl.edu	37	1	104297180	104297180	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	104297180	104297180	A	T	SNP	AMY1C	ENST00000370079	human	ensembl	74_37	+1	known	missense	c.938	p.N313I	1.000	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,prints_Alpha_amylase	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY1C	HGNC	ENSG00000187733	tier1	rs200267405	-	131	0	0.00	204	27	11.69
AMY2A	0	genome.wustl.edu	37	1	104162312	104162312	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	104162312	104162312	T	C	SNP	AMY2A	ENST00000414303	human	ensembl	74_37	+1	known	missense	c.650	p.M217T	1.000	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,prints_Alpha_amylase	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY2A	HGNC	ENSG00000243480	tier1	-	-	277	0	0.00	278	52	15.71
ANAPC15	0	genome.wustl.edu	37	11	71822269	71822269	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	71822269	71822269	A	G	SNP	ANAPC15	ENST00000227618	human	ensembl	74_37	-1	known	silent	c.54	p.F18	1.000	NULL	NULL	-	no_errors	ANAPC15	HGNC	ENSG00000110200	tier1	-	-	57	0	0.00	65	32	32.99
ANKH	0	genome.wustl.edu	37	5	14758594	14758594	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	14758594	14758594	C	T	SNP	ANKH	ENST00000284268	human	ensembl	74_37	-1	known	missense	c.427	p.A143T	1.000	pfam_ANKH	pfam_ANKH	-	no_errors	ANKH	HGNC	ENSG00000154122	tier1	-	-	24	0	0.00	108	20	15.62
ANKRD20A11P	0	genome.wustl.edu	37	21	15311696	15311698	+	RNA	DEL	TTG	TTG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTG	TTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	21	15311696	15311698	TTG	-	DEL	ANKRD20A11P	ENST00000428576	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.251:0.227:0.203	-	-	-	no_errors	ANKRD20A11P	HGNC	ENSG00000215559	tier1			81	0	0.00	38	26	40.62
ANKRD20A19P	0	genome.wustl.edu	37	13	24515468	24515468	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	24515468	24515468	T	-	DEL	ANKRD20A19P	ENST00000420143	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.055	-	-	-	no_errors	ANKRD20A19P	HGNC	ENSG00000196593	tier1			101	0	0.00	118	21	15.11
ANKRD26	0	genome.wustl.edu	37	10	27332391	27332391	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	27332391	27332391	T	C	SNP	ANKRD26	ENST00000436985	human	ensembl	74_37	-1	known	missense	c.2173	p.M725V	0.000	NULL	pfam_DUF3496,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Polyketide_synth_docking,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD26	HGNC	ENSG00000107890	tier1	-	-	32	0	0.00	7	22	75.86
ANKRD28	0	genome.wustl.edu	37	3	15765962	15765962	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	15765962	15765962	T	C	SNP	ANKRD28	ENST00000383777	human	ensembl	74_37	-1	known	missense	c.719	p.Y240C	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD28	HGNC	ENSG00000206560	tier1	-	-	31	0	0.00	9	21	70.00
ANKRD30A	0	genome.wustl.edu	37	10	37433982	37433982	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	37433982	37433982	C	T	SNP	ANKRD30A	ENST00000361713	human	ensembl	74_37	+1	known	missense	c.1285	p.R429W	0.075	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30A	HGNC	ENSG00000148513				37	0	0.00	29	2	6.45
ANKRD36BP2	0	genome.wustl.edu	37	2	89103911	89103911	+	RNA	SNP	T	T	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	89103911	89103911	T	G	SNP	ANKRD36BP2	ENST00000393515	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ANKRD36BP2	HGNC	ENSG00000230006	tier1	-	-	118	0	0.00	120	42	25.77
ANKRD42	0	genome.wustl.edu	37	11	82935967	82935967	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	82935967	82935967	G	A	SNP	ANKRD42	ENST00000393392	human	ensembl	74_37	+1	known	silent	c.573	p.T191	0.074	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD42	HGNC	ENSG00000137494	tier1	rs145591736	-	29	0	0.00	26	9	25.71
ANKRD42	0	genome.wustl.edu	37	11	82966931	82966931	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	82966931	82966931	A	-	DEL	ANKRD42	ENST00000260047	human	ensembl	74_37	+1	putative	frame_shift_del	c.1509	p.K506fs	0.991	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD42	HGNC	ENSG00000137494	tier1			48	0	0.00	39	3	7.14
ANP32BP1	0	genome.wustl.edu	37	15	75614651	75614651	+	RNA	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	75614651	75614651	T	A	SNP	ANP32BP1	ENST00000564205	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ANP32BP1	HGNC	ENSG00000259790	tier1	-	-	71	0	0.00	17	58	77.33
ANXA7	0	genome.wustl.edu	37	10	75135834	75135836	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	75135834	75135836	AAA	-	DEL	ANXA7	ENST00000463788	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.004:0.005	-	-	-	no_errors	ANXA7	HGNC	ENSG00000138279	tier1			19	0	0.00	14	12	46.15
AP1M1	0	genome.wustl.edu	37	19	16345014	16345014	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	16345014	16345014	G	A	SNP	AP1M1	ENST00000444449	human	ensembl	74_37	+1	known	missense	c.1214	p.R405H	1.000	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_errors	AP1M1	HGNC	ENSG00000072958	tier1	-	-	57	0	0.00	71	46	39.32
AP4B1	0	genome.wustl.edu	37	1	114440426	114440426	+	RNA	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	114440426	114440426	C	-	DEL	AP4B1	ENST00000462591	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AP4B1	HGNC	ENSG00000134262	tier1			36	0	0.00	24	15	38.46
APOB	0	genome.wustl.edu	37	2	21234423	21234425	+	In_Frame_Del	DEL	TGT	TGT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TGT	TGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	21234423	21234425	TGT	-	DEL	APOB	ENST00000233242	human	ensembl	74_37	-1	known	in_frame_del	c.5317_5315	p.N1772in_frame_del	0.007:0.202:0.983	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674	tier1			45	0	0.00	57	7	10.94
APOB	0	genome.wustl.edu	37	2	21260129	21260129	+	Splice_Site	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	21260129	21260129	T	C	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	splice_site	c.538-2	e6-2	1.000	-	-	-	no_errors	APOB	HGNC	ENSG00000084674	tier1	-	-	58	0	0.00	58	59	50.43
APOBR	0	genome.wustl.edu	37	16	28507452	28507452	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	28507452	28507452	G	A	SNP	APOBR	ENST00000564831	human	ensembl	74_37	+1	known	missense	c.1090	p.G364R	0.000	NULL	NULL	-	no_errors	APOBR	HGNC	ENSG00000184730	tier1	-	-	33	0	0.00	38	7	14.29
APOH	0	genome.wustl.edu	37	17	64224221	64224221	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	64224221	64224221	G	A	SNP	APOH	ENST00000205948	human	ensembl	74_37	-1	known	missense	c.158	p.P53L	0.985	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_Sushi_2,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	APOH	HGNC	ENSG00000091583	tier1	-	-	64	0	0.00	32	38	54.29
APPL1	0	genome.wustl.edu	37	3	57293965	57293965	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	57293965	57293965	C	T	SNP	APPL1	ENST00000288266	human	ensembl	74_37	+1	known	missense	c.1576	p.R526C	1.000	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_PTB/PI_dom,smart_Pleckstrin_homology,smart_PTB/PI_dom,pfscan_Pleckstrin_homology,pfscan_PTB/PI_dom	-	no_errors	APPL1	HGNC	ENSG00000157500	tier1	-	-	46	0	0.00	13	25	65.79
AQP11	0	genome.wustl.edu	37	11	77320575	77320575	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	77320575	77320575	A	-	DEL	AQP11	ENST00000528638	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.900	-	-	-	no_errors	AQP11	HGNC	ENSG00000178301	tier1			17	0	0.00	23	13	36.11
AQP3	0	genome.wustl.edu	37	9	33441446	33441447	+	RNA	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	33441446	33441447	-	T	INS	AQP3	ENST00000493581	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004:0.001	-	-	-	no_errors	AQP3	HGNC	ENSG00000165272	tier1			29	0	0.00	33	9	21.43
ARAP3	0	genome.wustl.edu	37	5	141052870	141052870	+	RNA	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	141052870	141052870	G	-	DEL	ARAP3	ENST00000524066	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	ARAP3	HGNC	ENSG00000120318	tier1			19	0	0.00	14	6	30.00
ARC	0	genome.wustl.edu	37	8	143694918	143694918	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	143694918	143694918	G	T	SNP	ARC	ENST00000356613	human	ensembl	74_37	-1	known	missense	c.715	p.L239M	1.000	NULL	prints_Activity-reg_cytoskelet-assoc	-	no_errors	ARC	HGNC	ENSG00000198576	tier1	-	-	71	0	0.00	196	34	14.78
ARHGAP20	0	genome.wustl.edu	37	11	110451806	110451806	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	110451806	110451806	C	T	SNP	ARHGAP20	ENST00000260283	human	ensembl	74_37	-1	known	missense	c.1864	p.D622N	1.000	NULL	pfam_RhoGAP_dom,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Ras-assoc,pfscan_RhoGAP_dom	-	no_errors	ARHGAP20	HGNC	ENSG00000137727	tier1	-	-	33	0	0.00	28	20	41.67
ARHGAP21	0	genome.wustl.edu	37	10	24886394	24886394	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	24886394	24886394	T	C	SNP	ARHGAP21	ENST00000396432	human	ensembl	74_37	-1	known	missense	c.3316	p.R1106G	0.998	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP21	HGNC	ENSG00000107863	tier1	rs199641044	-	39	0	0.00	16	21	56.76
ARHGAP23P1	0	genome.wustl.edu	37	16	33738914	33738914	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	33738914	33738914	C	T	SNP	ARHGAP23P1	ENST00000567025	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ARHGAP23P1	HGNC	ENSG00000260781	tier1	-	-	130	0	0.00	152	50	24.75
ARHGAP35	0	genome.wustl.edu	37	19	47423886	47423886	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	47423886	47423886	C	T	SNP	ARHGAP35	ENST00000404338	human	ensembl	74_37	+1	known	nonsense	c.1954	p.Q652*	1.000	NULL	pfam_RhoGAP_dom,pfam_Small_GTPase,pfam_FF_domain,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP35	HGNC	ENSG00000160007	tier1	-	-	21	0	0.00	6	16	72.73
ARHGAP39	0	genome.wustl.edu	37	8	145773078	145773078	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	145773078	145773078	C	T	SNP	ARHGAP39	ENST00000377307	human	ensembl	74_37	-1	known	silent	c.1392	p.P464	0.055	NULL	pfam_RhoGAP_dom,pfam_MyTH4_dom,superfamily_Rho_GTPase_activation_prot,superfamily_WW_dom,smart_WW_dom,smart_MyTH4_dom,smart_RhoGAP_dom,pfscan_MyTH4_dom,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP39	HGNC	ENSG00000147799	tier1	-	-	46	0	0.00	184	24	11.54
ARHGAP9	0	genome.wustl.edu	37	12	57871263	57871263	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	57871263	57871263	C	T	SNP	ARHGAP9	ENST00000356411	human	ensembl	74_37	-1	known	silent	c.735	p.P245	0.491	superfamily_WW_dom,pfscan_WW_dom	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_WW_dom,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_WW_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP9	HGNC	ENSG00000123329	tier1	-	-	29	0	0.00	33	22	40.00
ARNTL	0	genome.wustl.edu	37	11	13399889	13399889	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	13399889	13399889	C	A	SNP	ARNTL	ENST00000403290	human	ensembl	74_37	+1	known	missense	c.1420	p.P474T	1.000	NULL	pfam_PAS_fold,pfam_PAS_fold_3,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_Nuc_translocat,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	ARNTL	HGNC	ENSG00000133794	tier1	-	-	29	0	0.00	8	27	77.14
ARPC2	0	genome.wustl.edu	37	2	219118832	219118833	+	RNA	DEL	AA	AA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	219118832	219118833	AA	-	DEL	ARPC2	ENST00000487321	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.933:0.940	-	-	-	no_errors	ARPC2	HGNC	ENSG00000163466	tier1			18	0	0.00	25	13	34.21
ARPC5	0	genome.wustl.edu	37	1	183599769	183599769	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	183599769	183599769	G	A	SNP	ARPC5	ENST00000294742	human	ensembl	74_37	-1	known	missense	c.229	p.R77W	1.000	pfam_ARP2/3_p16_Arc,superfamily_ARP2/3_p16_Arc	pfam_ARP2/3_p16_Arc,superfamily_ARP2/3_p16_Arc	-	no_errors	ARPC5	HGNC	ENSG00000162704	tier1	-	-	24	0	0.00	21	6	22.22
ARSI	0	genome.wustl.edu	37	5	149677873	149677873	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	149677873	149677873	C	T	SNP	ARSI	ENST00000328668	human	ensembl	74_37	-1	known	missense	c.614	p.G205D	1.000	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSI	HGNC	ENSG00000183876	tier1	-	-	17	0	0.00	13	35	72.92
ARVCF	0	genome.wustl.edu	37	22	19961708	19961708	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	19961708	19961708	G	A	SNP	ARVCF	ENST00000263207	human	ensembl	74_37	-1	known	missense	c.2015	p.T672M	1.000	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARVCF	HGNC	ENSG00000099889	tier1	-	-	39	0	0.00	30	27	47.37
ASAP2	0	genome.wustl.edu	37	2	9491025	9491025	+	Splice_Site	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	9491025	9491025	G	A	SNP	ASAP2	ENST00000281419	human	ensembl	74_37	+1	known	splice_site	c.1111+1	e12+1	1.000	-	-	-	no_errors	ASAP2	HGNC	ENSG00000151693	tier1	-	-	36	0	0.00	23	22	48.89
ASB16	0	genome.wustl.edu	37	17	42249535	42249535	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	42249535	42249535	C	T	SNP	ASB16	ENST00000293414	human	ensembl	74_37	+1	known	silent	c.423	p.V141	0.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB16	HGNC	ENSG00000161664	tier1	-	-	28	0	0.00	38	15	28.30
ASXL1	0	genome.wustl.edu	37	20	30954215	30954215	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	30954215	30954215	T	C	SNP	ASXL1	ENST00000375687	human	ensembl	74_37	+1	known	missense	c.86	p.M29T	1.000	NULL	NULL	-	no_errors	ASXL1	HGNC	ENSG00000171456	tier1	-	-	59	0	0.00	67	55	45.08
ASXL1	0	genome.wustl.edu	37	20	31022442	31022442	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	31022442	31022442	G	-	DEL	ASXL1	ENST00000375687	human	ensembl	74_37	+1	known	frame_shift_del	c.1927	p.G645fs	1.000	NULL	NULL	-	no_errors	ASXL1	HGNC	ENSG00000171456	tier1			49	0	0.00	67	26	27.96
ATAD2	0	genome.wustl.edu	37	8	124368685	124368685	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	124368685	124368685	A	-	DEL	ATAD2	ENST00000287394	human	ensembl	74_37	-1	known	frame_shift_del	c.1590	p.F530fs	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_ATPase_AAA_core,pfam_Bromodomain,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2	HGNC	ENSG00000156802	tier1			19	0	0.00	35	17	32.69
ATF4P4	0	genome.wustl.edu	37	11	113660924	113660924	+	RNA	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	113660924	113660924	C	-	DEL	ATF4P4	ENST00000393544	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	ATF4P4	HGNC	ENSG00000256167	tier1			59	0	0.00	65	16	19.75
ATN1	0	genome.wustl.edu	37	12	7045897	7045897	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	7045897	7045897	G	A	SNP	ATN1	ENST00000356654	human	ensembl	74_37	+1	known	silent	c.1467	p.Q489	0.700	pfam_Atrophin-like	pfam_Atrophin-like,prints_Atrophin-1	-	no_errors	ATN1	HGNC	ENSG00000111676				32	0	0.00	49	13	20.63
ATN1	0	genome.wustl.edu	37	12	7045933	7045933	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	7045933	7045933	G	T	SNP	ATN1	ENST00000356654	human	ensembl	74_37	+1	known	missense	c.1503	p.Q501H	0.002	pfam_Atrophin-like	pfam_Atrophin-like,prints_Atrophin-1	-	no_errors	ATN1	HGNC	ENSG00000111676				30	0	0.00	63	5	7.14
ATP11B	0	genome.wustl.edu	37	3	182635844	182635844	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	182635844	182635844	C	T	SNP	ATP11B	ENST00000323116	human	ensembl	74_37	+1	known	silent	c.3486	p.N1162	1.000	NULL	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP11B	HGNC	ENSG00000058063	tier1	-	-	64	0	0.00	106	11	9.40
ATP2A2	0	genome.wustl.edu	37	12	110777173	110777173	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	110777173	110777173	C	T	SNP	ATP2A2	ENST00000539276	human	ensembl	74_37	+1	known	missense	c.1507	p.P503S	1.000	superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Ca-transp_IIA	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A2	HGNC	ENSG00000174437	tier1	-	-	25	0	0.00	11	22	66.67
ATP8B3	0	genome.wustl.edu	37	19	1796768	1796768	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	1796768	1796768	C	A	SNP	ATP8B3	ENST00000539485	human	ensembl	74_37	-1	known	missense	c.1695	p.W565C	0.996	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B3	HGNC	ENSG00000130270	tier1	-	-	18	0	0.00	28	17	37.78
ATRNL1	0	genome.wustl.edu	37	10	117061383	117061383	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	117061383	117061383	C	T	SNP	ATRNL1	ENST00000355044	human	ensembl	74_37	+1	known	missense	c.2648	p.A883V	1.000	NULL	pfam_Kelch_1,pfam_Kelch_2,pfam_Plexin_repeat,pfam_CUB_dom,pfam_EGF_extracell,superfamily_C-type_lectin_fold,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_EG-like_dom,smart_CUB_dom,smart_Plexin-like_fold,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRNL1	HGNC	ENSG00000107518	tier1	rs140372621	-	36	0	0.00	40	16	28.07
ATRX	0	genome.wustl.edu	37	X	76761749	76761749	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	76761749	76761749	A	G	SNP	ATRX	ENST00000480283	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1	-	-	13	0	0.00	18	13	41.94
B3GNT4	0	genome.wustl.edu	37	12	122691380	122691380	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	122691380	122691380	G	A	SNP	B3GNT4	ENST00000324189	human	ensembl	74_37	+1	known	silent	c.582	p.T194	0.018	pfam_Glyco_trans_31	pfam_Glyco_trans_31,pfam_Fringe-like	-	no_errors	B3GNT4	HGNC	ENSG00000176383	tier1	-	-	34	0	0.00	24	26	52.00
BAI3	0	genome.wustl.edu	37	6	70048831	70048831	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	70048831	70048831	G	T	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	missense	c.3212	p.G1071V	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298	tier1	-	-	35	0	0.00	35	6	14.63
BAZ2B	0	genome.wustl.edu	37	2	160317645	160317645	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	160317645	160317645	T	-	DEL	BAZ2B	ENST00000483316	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.155	-	-	-	no_errors	BAZ2B	HGNC	ENSG00000123636	tier1			19	0	0.00	19	6	24.00
BBS2	0	genome.wustl.edu	37	16	56532485	56532485	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	56532485	56532485	A	-	DEL	BBS2	ENST00000566410	human	ensembl	74_37	-1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	BBS2	HGNC	ENSG00000125124	tier1			51	0	0.00	48	28	36.84
BCCIP	0	genome.wustl.edu	37	10	127520211	127520212	+	RNA	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	127520211	127520212	-	T	INS	BCCIP	ENST00000463330	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	BCCIP	HGNC	ENSG00000107949	tier1			15	0	0.00	7	4	36.36
BCL11A	0	genome.wustl.edu	37	2	60687186	60687187	+	RNA	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	60687186	60687187	-	A	INS	BCL11A	ENST00000477659	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.505:1.000	-	-	-	no_errors	BCL11A	HGNC	ENSG00000119866	tier1			27	0	0.00	12	12	50.00
BCL9L	0	genome.wustl.edu	37	11	118772427	118772427	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	118772427	118772427	A	G	SNP	BCL9L	ENST00000334801	human	ensembl	74_37	-1	known	silent	c.2025	p.R675	0.044	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9L	HGNC	ENSG00000186174	tier1	-	-	26	0	0.00	28	22	44.00
BCL9L	0	genome.wustl.edu	37	11	118779083	118779083	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	118779083	118779083	G	T	SNP	BCL9L	ENST00000334801	human	ensembl	74_37	-1	known	missense	c.308	p.P103H	0.786	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9L	HGNC	ENSG00000186174	tier1	-	-	27	0	0.00	29	21	42.00
BCL9L	0	genome.wustl.edu	37	11	118769840	118769840	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	118769840	118769840	G	C	SNP	BCL9L	ENST00000334801	human	ensembl	74_37	-1	known	missense	c.3784	p.P1262A	1.000	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9L	HGNC	ENSG00000186174				8	0	0.00	10	3	23.08
BCMO1	0	genome.wustl.edu	37	16	81304016	81304016	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	81304016	81304016	G	A	SNP	BCMO1	ENST00000258168	human	ensembl	74_37	+1	known	missense	c.1096	p.D366N	0.994	pfam_Carotenoid_Oase	pfam_Carotenoid_Oase	-	no_errors	BCMO1	HGNC	ENSG00000135697	tier1	-	-	17	0	0.00	28	14	33.33
BEGAIN	0	genome.wustl.edu	37	14	101004530	101004530	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	101004530	101004530	C	-	DEL	BEGAIN	ENST00000355173	human	ensembl	74_37	-1	known	frame_shift_del	c.1558	p.D520fs	0.003	NULL	superfamily_Prefoldin	-	no_errors	BEGAIN	HGNC	ENSG00000183092	tier1			8	0	0.00	16	5	23.81
BIN1	0	genome.wustl.edu	37	2	127825800	127825801	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	127825800	127825801	-	G	INS	BIN1	ENST00000316724	human	ensembl	74_37	-1	known	frame_shift_ins	c.551_550	p.Q184fs	1.000:1.000	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom	pfam_BAR_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,prints_Amphiphysin,prints_Amphiphysin_2,prints_SH3_domain	-	no_errors	BIN1	HGNC	ENSG00000136717	tier1			20	0	0.00	41	23	35.94
BLVRA	0	genome.wustl.edu	37	7	43846645	43846645	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	43846645	43846645	G	T	SNP	BLVRA	ENST00000265523	human	ensembl	74_37	+1	known	missense	c.702	p.K234N	0.993	pfam_Biliverdin_Rdtase_cat,pirsf_Biliverdin_Rdtase_A	pfam_Biliverdin_Rdtase_cat,pfam_Oxidoreductase_N,pirsf_Biliverdin_Rdtase_A	-	no_errors	BLVRA	HGNC	ENSG00000106605	tier1	-	-	39	0	0.00	29	19	39.58
BMS1P20	0	genome.wustl.edu	37	22	22661174	22661174	+	RNA	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	22661174	22661174	C	-	DEL	BMS1P20	ENST00000426066	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.876	-	-	-	no_errors	BMS1P20	HGNC	ENSG00000236850	tier1			77	0	0.00	103	30	22.56
BMS1P5	0	genome.wustl.edu	37	10	48930126	48930126	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	48930126	48930126	A	0	DEL	BMS1P5	ENST00000449800	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	BMS1P5	HGNC	ENSG00000204164				19	0	0.00	19	16	45.71
BNIP3P1	0	genome.wustl.edu	37	14	28733715	28733715	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	28733715	28733715	G	A	SNP	BNIP3P1	ENST00000550043	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	BNIP3P1	HGNC	ENSG00000197358	tier1	-	-	9	0	0.00	11	11	50.00
BOD1L1	0	genome.wustl.edu	37	4	13606084	13606084	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	13606084	13606084	T	C	SNP	BOD1L1	ENST00000040738	human	ensembl	74_37	-1	known	missense	c.2440	p.I814V	1.000	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219	tier1	-	-	46	0	0.00	14	31	68.89
BPIFB1	0	genome.wustl.edu	37	20	31876669	31876669	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	31876669	31876669	G	A	SNP	BPIFB1	ENST00000253354	human	ensembl	74_37	+1	known	missense	c.238	p.V80I	0.000	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,pirsf_PLUNC_long_form	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,pirsf_PLUNC_long_form	-	no_errors	BPIFB1	HGNC	ENSG00000125999	tier1	-	-	35	0	0.00	33	28	45.16
BRCA2	0	genome.wustl.edu	37	13	32913836	32913837	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	32913836	32913837	-	A	INS	BRCA2	ENST00000380152	human	ensembl	74_37	+1	known	frame_shift_ins	c.5344_5345	p.N1784fs	0.000:0.000	pirsf_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold,pirsf_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618	tier1			33	0	0.00	29	8	21.62
BRD9	0	genome.wustl.edu	37	5	876321	876321	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	876321	876321	C	A	SNP	BRD9	ENST00000467963	human	ensembl	74_37	-1	known	missense	c.1278	p.Q426H	1.000	pfam_DUF3512	pfam_DUF3512,pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD9	HGNC	ENSG00000028310				20	0	0.00	71	9	11.25
BRD9	0	genome.wustl.edu	37	5	878486	878486	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	878486	878486	C	T	SNP	BRD9	ENST00000467963	human	ensembl	74_37	-1	known	missense	c.1255	p.V419M	0.983	pfam_DUF3512	pfam_DUF3512,pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD9	HGNC	ENSG00000028310				32	0	0.00	124	9	6.72
BRPF1	0	genome.wustl.edu	37	3	9785476	9785476	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	9785476	9785476	G	A	SNP	BRPF1	ENST00000383829	human	ensembl	74_37	+1	known	silent	c.2526	p.R842	1.000	NULL	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP_dom,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_PHD-finger,pfscan_Znf_C2H2,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRPF1	HGNC	ENSG00000156983	tier1	-	-	38	0	0.00	47	16	25.40
BRWD3	0	genome.wustl.edu	37	X	79932174	79932174	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	79932174	79932174	T	C	SNP	BRWD3	ENST00000373275	human	ensembl	74_37	-1	known	silent	c.5343	p.R1781	1.000	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_Quino_amine_DH_bsu,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	BRWD3	HGNC	ENSG00000165288	tier1	-	-	12	0	0.00	9	21	70.00
BTNL10	0	genome.wustl.edu	37	1	228699644	228699644	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	228699644	228699644	G	A	SNP	BTNL10	ENST00000400948	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	BTNL10	HGNC	ENSG00000215811	tier1	-	-	27	0	0.00	18	24	57.14
BTRC	0	genome.wustl.edu	37	10	103285773	103285773	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	103285773	103285773	G	A	SNP	BTRC	ENST00000370187	human	ensembl	74_37	+1	known	missense	c.560	p.R187Q	1.000	superfamily_F-box_dom	pfam_WD40_repeat,pfam_Beta-TrCP_D,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	BTRC	HGNC	ENSG00000166167	tier1	-	-	60	0	0.00	55	21	27.63
C11orf30	0	genome.wustl.edu	37	11	76256924	76256924	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	76256924	76256924	A	G	SNP	C11orf30	ENST00000334736	human	ensembl	74_37	+1	known	missense	c.3357	p.I1119M	1.000	NULL	pfam_ENT_N,pfscan_ENT_N	-	no_errors	C11orf30	HGNC	ENSG00000158636	tier1	-	-	32	0	0.00	21	15	41.67
C11orf40	0	genome.wustl.edu	37	11	4592711	4592711	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	4592711	4592711	T	A	SNP	C11orf40	ENST00000307616	human	ensembl	74_37	-1	known	missense	c.596	p.N199I	0.006	NULL	NULL	-	no_errors	C11orf40	HGNC	ENSG00000171987				74	0	0.00	84	7	7.69
C14orf169	0	genome.wustl.edu	37	14	73959704	73959706	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	73959704	73959706	TTT	-	DEL	C14orf169	ENST00000531973	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.001	-	-	-	no_errors	C14orf169	HGNC	ENSG00000255242	tier1			26	0	0.00	39	25	39.06
C15orf27	0	genome.wustl.edu	37	15	76496546	76496546	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	76496546	76496546	T	A	SNP	C15orf27	ENST00000388942	human	ensembl	74_37	+1	known	missense	c.1486	p.F496I	0.780	NULL	NULL	-	no_errors	C15orf27	HGNC	ENSG00000169758	tier1	-	-	27	0	0.00	11	26	70.27
C18orf61	0	genome.wustl.edu	37	18	12212029	12212029	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	12212029	12212029	A	-	DEL	C18orf61	ENST00000586642	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.923	-	-	-	no_errors	RP11-64C12.3	Clone_based_vega_gene	ENSG00000267733	tier1			22	0	0.00	40	12	23.08
C1orf106	0	genome.wustl.edu	37	1	200870139	200870141	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	200870139	200870141	GGA	-	DEL	C1orf106	ENST00000367342	human	ensembl	74_37	+1	known	in_frame_del	c.627_629	p.E211in_frame_del	0.398:0.985:1.000	pfam_DUF3338	pfam_DUF3338	-	no_errors	C1orf106	HGNC	ENSG00000163362	tier1			33	0	0.00	24	18	42.86
C1orf127	0	genome.wustl.edu	37	1	11008750	11008750	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	11008750	11008750	G	A	SNP	C1orf127	ENST00000377004	human	ensembl	74_37	-1	known	missense	c.1442	p.T481M	0.000	NULL	superfamily_DNA-bd_dom_put	-	no_errors	C1orf127	HGNC	ENSG00000175262	tier1	-	-	50	0	0.00	62	12	16.22
C1orf162	0	genome.wustl.edu	37	1	112019580	112019580	+	RNA	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	112019580	112019580	G	T	SNP	C1orf162	ENST00000464591	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C1orf162	HGNC	ENSG00000143110	tier1	-	-	32	0	0.00	30	15	33.33
C2orf42	0	genome.wustl.edu	37	2	70387883	70387883	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	70387883	70387883	G	A	SNP	C2orf42	ENST00000264434	human	ensembl	74_37	-1	known	nonsense	c.1390	p.R464*	1.000	NULL	NULL	-	no_errors	C2orf42	HGNC	ENSG00000115998	tier1	-	-	60	0	0.00	45	35	43.75
C2orf62	0	genome.wustl.edu	37	2	219222406	219222406	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	219222406	219222406	G	A	SNP	C2orf62	ENST00000289388	human	ensembl	74_37	+1	known	missense	c.268	p.A90T	0.982	NULL	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	-	no_errors	C2orf62	HGNC	ENSG00000158428	tier1	-	-	55	0	0.00	42	14	25.00
C4orf21	0	genome.wustl.edu	37	4	113539992	113539992	+	Silent	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	113539992	113539992	T	A	SNP	C4orf21	ENST00000505019	human	ensembl	74_37	-1	known	silent	c.1206	p.V402	0.000	NULL	pfam_DUF2439,pfam_Znf_GRF,superfamily_P-loop_NTPase	-	no_errors	C4orf21	HGNC	ENSG00000138658	tier1	-	-	39	0	0.00	19	9	32.14
C4orf29	0	genome.wustl.edu	37	4	128949844	128949844	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	128949844	128949844	G	A	SNP	C4orf29	ENST00000398965	human	ensembl	74_37	+1	known	missense	c.914	p.R305H	0.053	pfam_DUF2048	pfam_DUF2048	-	no_errors	C4orf29	HGNC	ENSG00000164074	tier1	-	-	20	0	0.00	11	5	31.25
C5orf42	0	genome.wustl.edu	37	5	37198930	37198931	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	37198930	37198931	0	T	INS	C5orf42	ENST00000425232	human	ensembl	74_37	-1	known	frame_shift_ins	c.3546_3545	p.N1182fs	0.003:0.889	NULL	superfamily_Quino_amine_DH_bsu	-	no_errors	C5orf42	HGNC	ENSG00000197603				23	0	0.00	64	7	9.86
C6	0	genome.wustl.edu	37	5	41181559	41181560	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	41181559	41181560	-	C	INS	C6	ENST00000263413	human	ensembl	74_37	-1	known	frame_shift_ins	c.829_828	p.S276fs	0.000:0.000	NULL	pfam_MACPF,pfam_Sushi_SCR_CCP,pfam_Thrombospondin_1_rpt,pfam_LDrepeatLR_classA_rpt,pfam_Kazal_dom,superfamily_Sushi_SCR_CCP,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,smart_Sushi_SCR_CCP,smart_FacI_MAC,prints_MAC_perforin,pfscan_LDrepeatLR_classA_rpt,pfscan_Sushi_SCR_CCP,pfscan_Thrombospondin_1_rpt	-	no_errors	C6	HGNC	ENSG00000039537	tier1			32	0	0.00	88	13	12.87
C6orf118	0	genome.wustl.edu	37	6	165715153	165715153	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	165715153	165715153	G	A	SNP	C6orf118	ENST00000230301	human	ensembl	74_37	-1	known	missense	c.658	p.R220C	0.535	superfamily_Ribonuclease/ribotoxin	superfamily_Ribonuclease/ribotoxin	-	no_errors	C6orf118	HGNC	ENSG00000112539	tier1	rs140500230	-	22	0	0.00	15	16	51.61
C9orf131	0	genome.wustl.edu	37	9	35044004	35044005	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	35044004	35044005	-	A	INS	C9orf131	ENST00000312292	human	ensembl	74_37	+1	known	frame_shift_ins	c.1378_1379	p.N461fs	0.083:0.084	NULL	NULL	-	no_errors	C9orf131	HGNC	ENSG00000174038	tier1			11	0	0.00	14	10	41.67
CACNA1B	0	genome.wustl.edu	37	9	140941361	140941361	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	140941361	140941361	G	A	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	missense	c.3422	p.R1141H	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408	tier1	-	-	45	0	0.00	70	18	20.45
CACNA1C	0	genome.wustl.edu	37	12	2693755	2693757	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	2693755	2693757	GAG	-	DEL	CACNA1C	ENST00000399634	human	ensembl	74_37	+1	known	in_frame_del	c.2311_2313	p.E772in_frame_del	1.000:1.000:1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCC_L_a1csu,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1C	HGNC	ENSG00000151067	tier1			21	0	0.00	39	21	35.00
CACNA1C	0	genome.wustl.edu	37	12	2693757	2693757	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	2693757	2693757	G	A	SNP	CACNA1C	ENST00000399634	human	ensembl	74_37	+1	known	silent	c.2313	p.E771	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCC_L_a1csu,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1C	HGNC	ENSG00000151067				21	0	0.00	37	4	9.76
CACNA1G	0	genome.wustl.edu	37	17	48701760	48701760	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	48701760	48701760	G	T	SNP	CACNA1G	ENST00000359106	human	ensembl	74_37	+1	known	missense	c.6269	p.S2090I	1.000	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1G	HGNC	ENSG00000006283				25	0	0.00	45	3	6.25
CACNG3	0	genome.wustl.edu	37	16	24372735	24372735	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	24372735	24372735	C	T	SNP	CACNG3	ENST00000005284	human	ensembl	74_37	+1	known	missense	c.499	p.R167C	0.996	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu	-	no_errors	CACNG3	HGNC	ENSG00000006116	tier1	-	-	37	0	0.00	18	34	65.38
CALCOCO1	0	genome.wustl.edu	37	12	54105819	54105819	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	54105819	54105819	C	T	SNP	CALCOCO1	ENST00000550804	human	ensembl	74_37	-1	known	missense	c.1985	p.R662H	1.000	NULL	pfam_CoCoA	-	no_errors	CALCOCO1	HGNC	ENSG00000012822	tier1	-	-	63	0	0.00	37	34	47.89
CAP2	0	genome.wustl.edu	37	6	17507510	17507510	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	17507510	17507510	C	T	SNP	CAP2	ENST00000229922	human	ensembl	74_37	+1	known	silent	c.411	p.S137	0.991	pfam_Adenylate_cyclase-assoc_CAP_N,superfamily_Adenylate_cyclase-assoc_CAP_N	pfam_Adenylate_cyclase-assoc_CAP_N,pfam_Adenylate_cyclase-assoc_CAP_C,superfamily_Adenylate_cyclase-assoc_CAP_N,superfamily_Adenylate_cyclase-assoc_CAP_C,smart_CARP_motif	-	no_errors	CAP2	HGNC	ENSG00000112186	tier1	-	-	70	0	0.00	38	16	29.63
CARS	0	genome.wustl.edu	37	11	3062148	3062148	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	3062148	3062148	C	T	SNP	CARS	ENST00000380525	human	ensembl	74_37	-1	known	missense	c.433	p.A145T	1.000	pfam_Cys-tRNA/MSH_ligase,prints_Cys-tRNA/MSH_ligase,tigrfam_Cys-tRNA-ligase	pfam_Cys-tRNA/MSH_ligase,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Glutathione-S-Trfase_C-like,prints_Cys-tRNA/MSH_ligase,tigrfam_Cys-tRNA-ligase	-	no_errors	CARS	HGNC	ENSG00000110619	tier1	-	-	26	0	0.00	15	4	21.05
CASZ1	0	genome.wustl.edu	37	1	10725151	10725151	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	10725151	10725151	C	A	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	missense	c.494	p.R165M	0.974	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940	tier1	-	-	33	0	0.00	40	15	27.27
CBWD6	0	genome.wustl.edu	37	9	69238113	69238113	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	69238113	69238113	C	T	SNP	CBWD6	ENST00000461834	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CBWD6	HGNC	ENSG00000204790	tier1	-	-	195	0	0.00	246	48	16.33
CCDC110	0	genome.wustl.edu	37	4	186380035	186380035	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	186380035	186380035	A	G	SNP	CCDC110	ENST00000307588	human	ensembl	74_37	-1	known	missense	c.1706	p.I569T	0.158	NULL	superfamily_4_helix_cytokine-like_core	-	no_errors	CCDC110	HGNC	ENSG00000168491	tier1	-	-	83	0	0.00	42	24	36.36
CCDC130	0	genome.wustl.edu	37	19	13873201	13873201	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	13873201	13873201	C	T	SNP	CCDC130	ENST00000221554	human	ensembl	74_37	+1	known	missense	c.662	p.T221M	0.872	pfam_CWC16	pfam_CWC16	-	no_errors	CCDC130	HGNC	ENSG00000104957	tier1	-	-	26	0	0.00	36	23	38.98
CCDC148	0	genome.wustl.edu	37	2	159035476	159035476	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	159035476	159035476	C	T	SNP	CCDC148	ENST00000283233	human	ensembl	74_37	-1	known	missense	c.1403	p.R468H	1.000	NULL	NULL	-	no_errors	CCDC148	HGNC	ENSG00000153237	tier1	-	-	43	0	0.00	48	19	28.36
CCDC150	0	genome.wustl.edu	37	2	197531519	197531519	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	197531519	197531519	A	-	DEL	CCDC150	ENST00000389175	human	ensembl	74_37	+1	known	frame_shift_del	c.839	p.K283fs	0.374	NULL	NULL	-	no_errors	CCDC150	HGNC	ENSG00000144395	tier1			31	0	0.00	21	26	55.32
CCDC175	0	genome.wustl.edu	37	14	59992099	59992100	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	59992099	59992100	-	T	INS	CCDC175	ENST00000281581	human	ensembl	74_37	-1	known	frame_shift_ins	c.1896_1895	p.N632fs	0.000:0.000	NULL	superfamily_Prefoldin	-	no_errors	CCDC175	HGNC	ENSG00000151838	tier1			63	0	0.00	23	47	67.14
CCDC176	0	genome.wustl.edu	37	14	74524018	74524018	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	74524018	74524018	G	A	SNP	CCDC176	ENST00000492247	human	ensembl	74_37	+1	putative	silent	c.267	p.S89	0.000	NULL	NULL	-	no_errors	CCDC176	HGNC	ENSG00000119636	tier1	-	-	22	0	0.00	7	35	83.33
CCDC18	0	genome.wustl.edu	37	1	93667516	93667516	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	93667516	93667516	A	-	DEL	CCDC18	ENST00000557479	human	ensembl	74_37	+1	known	frame_shift_del	c.1120	p.V377fs	1.000	NULL	superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	CCDC18	HGNC	ENSG00000122483	tier1			44	0	0.00	33	20	37.74
CCDC18	0	genome.wustl.edu	37	1	93682272	93682273	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	93682272	93682273	-	A	INS	CCDC18	ENST00000557479	human	ensembl	74_37	+1	known	frame_shift_ins	c.2153_2154	p.N720fs	1.000:1.000	NULL	superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	CCDC18	HGNC	ENSG00000122483	tier1			37	0	0.00	40	11	21.57
CCDC180	0	genome.wustl.edu	37	9	100085126	100085126	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	100085126	100085126	G	A	SNP	CCDC180	ENST00000375202	human	ensembl	74_37	+1	known	missense	c.1303	p.V435M	0.012	NULL	NULL	-	no_errors	CCDC180	HGNC	ENSG00000197816	tier1	rs142121305	-	77	0	0.00	84	31	26.96
CCDC33	0	genome.wustl.edu	37	15	74623335	74623337	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	74623335	74623337	AGA	-	DEL	CCDC33	ENST00000321288	human	ensembl	74_37	+1	known	in_frame_del	c.2168_2170	p.K724in_frame_del	1.000:1.000:1.000	NULL	pfam_C2_dom,superfamily_C2_dom	-	no_errors	CCDC33	HGNC	ENSG00000140481	tier1			32	0	0.00	12	20	62.50
CCDC33	0	genome.wustl.edu	37	15	74623337	74623337	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	74623337	74623337	A	G	SNP	CCDC33	ENST00000321288	human	ensembl	74_37	+1	known	missense	c.2170	p.K724E	1.000	NULL	pfam_C2_dom,superfamily_C2_dom	-	no_errors	CCDC33	HGNC	ENSG00000140481				33	0	0.00	3	8	61.54
CCDC38	0	genome.wustl.edu	37	12	96271999	96271999	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	96271999	96271999	G	T	SNP	CCDC38	ENST00000344280	human	ensembl	74_37	-1	known	nonsense	c.1268	p.S423*	1.000	NULL	NULL	-	no_errors	CCDC38	HGNC	ENSG00000165972				25	0	0.00	24	3	11.11
CCDC40	0	genome.wustl.edu	37	17	78032417	78032417	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	78032417	78032417	G	C	SNP	CCDC40	ENST00000397545	human	ensembl	74_37	+1	known	missense	c.1284	p.E428D	0.502	NULL	pfam_E3_ubiquit_lig_BRE1	-	no_errors	CCDC40	HGNC	ENSG00000141519	tier1	-	-	24	0	0.00	32	32	50.00
CCDC42	0	genome.wustl.edu	37	17	8638830	8638830	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	8638830	8638830	G	A	SNP	CCDC42	ENST00000293845	human	ensembl	74_37	-1	known	missense	c.592	p.R198C	0.670	NULL	NULL	-	no_errors	CCDC42	HGNC	ENSG00000161973	tier1	-	-	23	0	0.00	31	27	46.55
CCDC7	0	genome.wustl.edu	37	10	32761449	32761449	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	32761449	32761449	G	T	SNP	CCDC7	ENST00000277657	human	ensembl	74_37	+1	known	missense	c.718	p.A240S	0.000	NULL	NULL	-	no_errors	CCDC7	HGNC	ENSG00000216937	tier1	-	-	23	0	0.00	23	4	14.81
CCDC8	0	genome.wustl.edu	37	19	46914706	46914706	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	46914706	46914706	A	G	SNP	CCDC8	ENST00000307522	human	ensembl	74_37	-1	known	silent	c.1362	p.A454	0.004	NULL	NULL	-	no_errors	CCDC8	HGNC	ENSG00000169515	tier1	-	-	21	0	0.00	46	10	17.86
CCDC80	0	genome.wustl.edu	37	3	112358576	112358576	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	112358576	112358576	G	A	SNP	CCDC80	ENST00000206423	human	ensembl	74_37	-1	known	silent	c.177	p.R59	0.020	NULL	NULL	-	no_errors	CCDC80	HGNC	ENSG00000091986	tier1	-	-	48	0	0.00	63	34	35.05
CCDC82	0	genome.wustl.edu	37	11	96117597	96117597	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	96117597	96117597	G	A	SNP	CCDC82	ENST00000278520	human	ensembl	74_37	-1	known	silent	c.315	p.N105	0.000	NULL	NULL	-	no_errors	CCDC82	HGNC	ENSG00000149231	tier1	-	-	88	0	0.00	88	63	41.72
CCDC88C	0	genome.wustl.edu	37	14	91739502	91739503	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	91739502	91739503	0	G	INS	CCDC88C	ENST00000389857	human	ensembl	74_37	-1	known	frame_shift_ins	c.5554_5553	p.S1851fs	0.035:0.000	NULL	pfam_Hook-related_fam,superfamily_Prefoldin,superfamily_Fum_Rdtase/Succ_DH_flav-like_C	-	no_errors	CCDC88C	HGNC	ENSG00000015133				8	0	0.00	9	4	30.77
CCER1	0	genome.wustl.edu	37	12	91348469	91348469	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	91348469	91348469	A	G	SNP	CCER1	ENST00000358859	human	ensembl	74_37	-1	known	silent	c.51	p.G17	0.537	NULL	NULL	-	no_errors	CCER1	HGNC	ENSG00000197651	tier1	-	-	25	0	0.00	40	11	21.57
CCL14	0	genome.wustl.edu	37	17	34311431	34311431	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	34311431	34311431	C	T	SNP	CCL14	ENST00000435911	human	ensembl	74_37	-1	known	missense	c.185	p.R62H	0.000	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL14	HGNC	ENSG00000213494	tier1	rs144903710	-	49	0	0.00	35	41	53.95
CCL20	0	genome.wustl.edu	37	2	228680154	228680154	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	228680154	228680154	T	-	DEL	CCL20	ENST00000473642	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	CCL20	HGNC	ENSG00000115009	tier1			14	0	0.00	15	6	28.57
CCNA1	0	genome.wustl.edu	37	13	37014167	37014167	+	Silent	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	37014167	37014167	C	A	SNP	CCNA1	ENST00000255465	human	ensembl	74_37	+1	known	silent	c.945	p.T315	0.000	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNA1	HGNC	ENSG00000133101				41	0	0.00	38	2	5.00
CCNC	0	genome.wustl.edu	37	6	100006296	100006296	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	100006296	100006296	A	-	DEL	CCNC	ENST00000482541	human	ensembl	74_37	-1	putative	frame_shift_del	c.423	p.F141fs	0.007	superfamily_Cyclin-like	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNC	HGNC	ENSG00000112237	tier1			25	0	0.00	15	7	31.82
CCNT1	0	genome.wustl.edu	37	12	49087795	49087795	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	49087795	49087795	G	A	SNP	CCNT1	ENST00000261900	human	ensembl	74_37	-1	known	missense	c.1202	p.A401V	1.000	NULL	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNT1	HGNC	ENSG00000129315	tier1	-	-	62	0	0.00	51	14	21.54
CCR3	0	genome.wustl.edu	37	3	46307343	46307343	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	46307343	46307343	A	-	DEL	CCR3	ENST00000545097	human	ensembl	74_37	+1	known	frame_shift_del	c.757	p.K255fs	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR3,prints_Chemokine_CCR1	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CCR3,prints_Chemokine_CCR1	-	no_errors	CCR3	HGNC	ENSG00000183625	tier1			25	0	0.00	6	12	66.67
CCSER1	0	genome.wustl.edu	37	4	91701607	91701607	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	91701607	91701607	G	T	SNP	CCSER1	ENST00000432775	human	ensembl	74_37	+1	known	missense	c.2025	p.R675S	0.264	NULL	NULL	-	no_errors	CCSER1	HGNC	ENSG00000184305	tier1	-	-	37	0	0.00	7	7	50.00
CCT7	0	genome.wustl.edu	37	2	73477474	73477474	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	73477474	73477474	A	G	SNP	CCT7	ENST00000258091	human	ensembl	74_37	+1	known	missense	c.1111	p.T371A	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,tigrfam_Chap_CCT_eta	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_eta	-	no_errors	CCT7	HGNC	ENSG00000135624	tier1	-	-	49	0	0.00	60	46	43.40
CCT7	0	genome.wustl.edu	37	2	73478542	73478542	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	73478542	73478542	G	A	SNP	CCT7	ENST00000258091	human	ensembl	74_37	+1	known	silent	c.1392	p.L464	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,tigrfam_Chap_CCT_eta	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_eta	-	no_errors	CCT7	HGNC	ENSG00000135624	tier1	-	-	30	0	0.00	60	36	37.50
CD163	0	genome.wustl.edu	37	12	7635292	7635292	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	7635292	7635292	A	-	DEL	CD163	ENST00000359156	human	ensembl	74_37	-1	known	frame_shift_del	c.3194	p.F1065fs	0.030	NULL	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	-	no_errors	CD163	HGNC	ENSG00000177575	tier1			31	0	0.00	40	13	24.53
CD1A	0	genome.wustl.edu	37	1	158226752	158226752	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	158226752	158226752	T	C	SNP	CD1A	ENST00000289429	human	ensembl	74_37	+1	known	missense	c.781	p.Y261H	0.997	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_Ig_C1-set,pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1A	HGNC	ENSG00000158477	tier1	-	-	52	0	0.00	58	19	24.68
CD200R1	0	genome.wustl.edu	37	3	112693701	112693701	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	112693701	112693701	G	T	SNP	CD200R1	ENST00000308611	human	ensembl	74_37	-1	known	missense	c.4	p.L2I	0.266	NULL	pfam_CD80_C2-set,pfscan_Ig-like_dom	-	no_errors	CD200R1	HGNC	ENSG00000163606	tier1	-	-	18	0	0.00	33	14	29.79
CD22	0	genome.wustl.edu	37	19	35828664	35828664	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	35828664	35828664	C	T	SNP	CD22	ENST00000085219	human	ensembl	74_37	+1	known	missense	c.725	p.P242L	0.520	pfscan_Ig-like_dom	pfam_Immunoglobulin,pfam_Ig_I-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CD22	HGNC	ENSG00000012124	tier1	-	-	17	0	0.00	4	7	63.64
CD34	0	genome.wustl.edu	37	1	208063101	208063102	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	208063101	208063102	AA	-	DEL	CD34	ENST00000367036	human	ensembl	74_37	-1	known	frame_shift_del	c.82_81	p.S28fs	0.000:0.000	NULL	pfam_CD34/Podocalyxin,prints_CD34	-	no_errors	CD34	HGNC	ENSG00000174059	tier1			16	0	0.00	20	5	20.00
CDC16	0	genome.wustl.edu	37	13	115012591	115012591	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	115012591	115012591	T	-	DEL	CDC16	ENST00000494581	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	CDC16	HGNC	ENSG00000130177	tier1			11	0	0.00	14	7	33.33
CDC40	0	genome.wustl.edu	37	6	110530394	110530394	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	110530394	110530394	G	T	SNP	CDC40	ENST00000307731	human	ensembl	74_37	+1	known	missense	c.598	p.V200L	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CDC40	HGNC	ENSG00000168438	tier1	-	-	45	0	0.00	40	6	13.04
CDH11	0	genome.wustl.edu	37	16	64984778	64984778	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	64984778	64984778	C	T	SNP	CDH11	ENST00000268603	human	ensembl	74_37	-1	known	missense	c.1786	p.D596N	1.000	smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH11	HGNC	ENSG00000140937	tier1	-	-	25	0	0.00	79	30	27.52
CDH11	0	genome.wustl.edu	37	16	64984913	64984913	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	64984913	64984913	C	T	SNP	CDH11	ENST00000268603	human	ensembl	74_37	-1	known	missense	c.1651	p.A551T	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH11	HGNC	ENSG00000140937	tier1	-	-	27	0	0.00	64	11	14.67
CDH26	0	genome.wustl.edu	37	20	58587784	58587784	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	58587784	58587784	A	-	DEL	CDH26	ENST00000348616	human	ensembl	74_37	+1	known	frame_shift_del	c.2498	p.*833fs	0.000	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH26	HGNC	ENSG00000124215	tier1			23	0	0.00	22	21	48.84
CDK12	0	genome.wustl.edu	37	17	37667792	37667795	+	Frame_Shift_Del	DEL	ACAA	ACAA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	ACAA	ACAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	37667792	37667795	ACAA	-	DEL	CDK12	ENST00000447079	human	ensembl	74_37	+1	known	frame_shift_del	c.2677_2680	p.N894fs	1.000:1.000:1.000:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK12	HGNC	ENSG00000167258	tier1			32	0	0.00	20	11	35.48
CDK19	0	genome.wustl.edu	37	6	110953273	110953273	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	110953273	110953273	T	C	SNP	CDK19	ENST00000368911	human	ensembl	74_37	-1	known	silent	c.606	p.P202	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK19	HGNC	ENSG00000155111	tier1	-	-	40	0	0.00	31	16	34.04
CDK19	0	genome.wustl.edu	37	6	110988756	110988756	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	110988756	110988756	C	T	SNP	CDK19	ENST00000368911	human	ensembl	74_37	-1	known	missense	c.337	p.A113T	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK19	HGNC	ENSG00000155111	tier1	-	-	17	0	0.00	11	11	50.00
CDK20	0	genome.wustl.edu	37	9	90582463	90582463	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	90582463	90582463	G	-	DEL	CDK20	ENST00000325303	human	ensembl	74_37	-1	known	frame_shift_del	c.955	p.H319fs	0.178	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK20	HGNC	ENSG00000156345	tier1			26	0	0.00	18	10	35.71
CDK8	0	genome.wustl.edu	37	13	26978124	26978124	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	26978124	26978124	C	A	SNP	CDK8	ENST00000381527	human	ensembl	74_37	+1	known	missense	c.1301	p.P434H	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK8	HGNC	ENSG00000132964	tier1	-	-	27	0	0.00	22	15	40.54
CDS2	0	genome.wustl.edu	37	20	5170988	5170990	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	5170988	5170990	TTT	-	DEL	CDS2	ENST00000379070	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.004:0.004	-	-	-	no_errors	CDS2	HGNC	ENSG00000101290	tier1			34	0	0.00	57	16	21.92
CELSR1	0	genome.wustl.edu	37	22	46931227	46931227	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	46931227	46931227	C	-	DEL	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	frame_shift_del	c.1841	p.G614fs	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275	tier1			26	0	0.00	50	33	39.76
CELSR2	0	genome.wustl.edu	37	1	109811737	109811737	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	109811737	109811737	C	-	DEL	CELSR2	ENST00000271332	human	ensembl	74_37	+1	known	frame_shift_del	c.6637	p.V2215fs	0.004	pfam_DUF3497	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126	tier1			19	0	0.00	31	17	35.42
CENPE	0	genome.wustl.edu	37	4	104115550	104115550	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	104115550	104115550	G	A	SNP	CENPE	ENST00000265148	human	ensembl	74_37	-1	known	missense	c.608	p.S203F	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_STAT_TF_coiled-coil,superfamily_Signal_recog_particl_SRP54_hlx,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	CENPE	HGNC	ENSG00000138778	tier1	-	-	38	0	0.00	5	13	72.22
CEP170	0	genome.wustl.edu	37	1	243288182	243288183	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	243288182	243288183	TT	-	DEL	CEP170	ENST00000468254	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.014	-	-	-	no_errors	CEP170	HGNC	ENSG00000143702	tier1			29	0	0.00	12	9	42.86
CEP170B	0	genome.wustl.edu	37	14	105353130	105353130	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	105353130	105353130	C	T	SNP	CEP170B	ENST00000453495	human	ensembl	74_37	+1	known	missense	c.2557	p.R853W	0.001	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170B	HGNC	ENSG00000099814	tier1	-	-	24	0	0.00	44	14	23.73
CEP85L	0	genome.wustl.edu	37	6	118887391	118887391	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	118887391	118887391	G	A	SNP	CEP85L	ENST00000368488	human	ensembl	74_37	-1	known	silent	c.330	p.S110	1.000	NULL	NULL	-	no_errors	CEP85L	HGNC	ENSG00000111860	tier1	-	-	39	0	0.00	26	16	38.10
CFI	0	genome.wustl.edu	37	4	110670692	110670692	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	110670692	110670692	C	T	SNP	CFI	ENST00000394634	human	ensembl	74_37	-1	known	missense	c.1007	p.R336Q	0.999	superfamily_Trypsin-like_Pept_dom	pfam_Peptidase_S1,pfam_LDrepeatLR_classA_rpt,pfam_SRCR,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_FacI_MAC,smart_Srcr_rcpt-rel,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,pfscan_LDrepeatLR_classA_rpt,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt	-	no_errors	CFI	HGNC	ENSG00000205403	tier1	-	-	24	0	0.00	19	11	36.67
CHD1L	0	genome.wustl.edu	37	1	146757121	146757123	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	146757121	146757123	GAG	-	DEL	CHD1L	ENST00000369258	human	ensembl	74_37	+1	known	in_frame_del	c.1975_1977	p.E660in_frame_del	0.998:1.000:0.999	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Macro_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	CHD1L	HGNC	ENSG00000131778	tier1			14	0	0.00	16	4	20.00
CHD3	0	genome.wustl.edu	37	17	7798765	7798765	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	7798765	7798765	C	0	DEL	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	frame_shift_del	c.1612	p.R540fs	0.007	superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004				33	0	0.00	67	7	9.46
CHRDL2	0	genome.wustl.edu	37	11	74415621	74415621	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	74415621	74415621	C	T	SNP	CHRDL2	ENST00000263671	human	ensembl	74_37	-1	known	missense	c.661	p.A221T	0.997	NULL	pfam_VWF_C,smart_VWF_C,pfscan_VWF_C	-	no_errors	CHRDL2	HGNC	ENSG00000054938	tier1	rs200667288	-	26	0	0.00	43	24	35.82
CHRND	0	genome.wustl.edu	37	2	233393037	233393037	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	233393037	233393037	C	-	DEL	CHRND	ENST00000258385	human	ensembl	74_37	+1	known	frame_shift_del	c.309	p.P105fs	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRND	HGNC	ENSG00000135902	tier1			20	0	0.00	39	13	25.00
CHST1	0	genome.wustl.edu	37	11	45671131	45671131	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	45671131	45671131	C	T	SNP	CHST1	ENST00000533673	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.988	-	-	-	no_errors	CHST1	HGNC	ENSG00000175264	tier1	-	-	38	0	0.00	44	8	15.38
CIDEA	0	genome.wustl.edu	37	18	12277160	12277160	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	12277160	12277160	C	T	SNP	CIDEA	ENST00000320477	human	ensembl	74_37	+1	known	missense	c.551	p.T184M	0.798	NULL	pfam_CIDE-N_dom,smart_CIDE-N_dom,pfscan_CIDE-N_dom	-	no_errors	CIDEA	HGNC	ENSG00000176194	tier1	-	-	43	0	0.00	60	43	41.75
CISD3	0	genome.wustl.edu	37	17	36891208	36891208	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	36891208	36891208	A	-	DEL	CISD3	ENST00000578573	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.038	-	-	-	no_errors	CISD3	HGNC	ENSG00000230055	tier1			35	0	0.00	32	18	36.00
CLASP1	0	genome.wustl.edu	37	2	122125240	122125240	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	122125240	122125240	T	C	SNP	CLASP1	ENST00000263710	human	ensembl	74_37	-1	known	silent	c.3810	p.S1270	0.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP1	HGNC	ENSG00000074054	tier1	-	-	66	0	0.00	88	42	32.31
CLCN7	0	genome.wustl.edu	37	16	1497455	1497455	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	1497455	1497455	C	T	SNP	CLCN7	ENST00000382745	human	ensembl	74_37	-1	known	missense	c.2188	p.E730K	1.000	NULL	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-7	-	no_errors	CLCN7	HGNC	ENSG00000103249	tier1	-	-	35	0	0.00	56	21	27.27
CLCNKB	0	genome.wustl.edu	37	1	16375608	16375608	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	16375608	16375608	C	-	DEL	CLCNKB	ENST00000375667	human	ensembl	74_37	+1	known	frame_shift_del	c.142	p.P49fs	0.851	NULL	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated	-	no_errors	CLCNKB	HGNC	ENSG00000184908	tier1			60	0	0.00	24	48	66.67
CLEC16A	0	genome.wustl.edu	37	16	11272324	11272324	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	11272324	11272324	C	T	SNP	CLEC16A	ENST00000409790	human	ensembl	74_37	+1	known	missense	c.2939	p.S980F	1.000	NULL	pfam_Uncharacterised_FPL	-	no_errors	CLEC16A	HGNC	ENSG00000038532	tier1	-	-	19	0	0.00	46	12	20.69
CLEC19A	0	genome.wustl.edu	37	16	19309988	19309988	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	19309988	19309988	C	-	DEL	CLEC19A	ENST00000476906	human	ensembl	74_37	+1	known	frame_shift_del	c.104	p.S37fs	0.988	NULL	NULL	-	no_errors	CLEC19A	HGNC	ENSG00000261210	tier1			22	0	0.00	47	18	27.69
CLEC9A	0	genome.wustl.edu	37	12	10205421	10205422	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	10205421	10205422	TT	-	DEL	CLEC9A	ENST00000544751	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CLEC9A	HGNC	ENSG00000197992	tier1			19	0	0.00	22	7	24.14
CLECL1	0	genome.wustl.edu	37	12	9875256	9875256	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	9875256	9875256	T	C	SNP	CLECL1	ENST00000327839	human	ensembl	74_37	-1	known	missense	c.470	p.Q157R	0.072	superfamily_C-type_lectin_fold	superfamily_C-type_lectin_fold	-	no_errors	CLECL1	HGNC	ENSG00000184293	tier1	-	-	50	0	0.00	38	15	28.30
CLIC5	0	genome.wustl.edu	37	6	45870934	45870934	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	45870934	45870934	C	T	SNP	CLIC5	ENST00000185206	human	ensembl	74_37	-1	known	missense	c.1124	p.R375Q	1.000	superfamily_Glutathione-S-Trfase_C-like,tigrfam_Int_Cl_channel	superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_Int_Cl_channel,tigrfam_Int_Cl_channel	-	no_errors	CLIC5	HGNC	ENSG00000112782	tier1	-	-	35	0	0.00	21	13	38.24
CLIP2	0	genome.wustl.edu	37	7	73770923	73770923	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	73770923	73770923	C	T	SNP	CLIP2	ENST00000223398	human	ensembl	74_37	+1	known	silent	c.987	p.S329	0.192	superfamily_CAP-Gly_domain	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_t-SNARE,pfscan_CAP-Gly_domain	-	no_errors	CLIP2	HGNC	ENSG00000106665	tier1	rs199730295	-	35	0	0.00	42	21	33.33
CLSTN1	0	genome.wustl.edu	37	1	9795218	9795219	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	9795218	9795219	-	C	INS	CLSTN1	ENST00000377298	human	ensembl	74_37	-1	known	frame_shift_ins	c.1898_1897	p.A633fs	0.989:1.000	NULL	pfam_Cadherin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	CLSTN1	HGNC	ENSG00000171603	tier1			39	0	0.00	34	7	17.07
CNBD2	0	genome.wustl.edu	37	20	34568534	34568534	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	34568534	34568534	C	T	SNP	CNBD2	ENST00000373973	human	ensembl	74_37	+1	known	missense	c.397	p.R133C	1.000	superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNBD2	HGNC	ENSG00000149646	tier1	rs146293825	-	20	0	0.00	25	21	45.65
CNGB1	0	genome.wustl.edu	37	16	57918169	57918169	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	57918169	57918169	C	T	SNP	CNGB1	ENST00000251102	human	ensembl	74_37	-1	known	missense	c.3655	p.E1219K	0.001	NULL	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGB1	HGNC	ENSG00000070729	tier1	-	-	17	0	0.00	42	10	19.23
CNOT1	0	genome.wustl.edu	37	16	58577327	58577327	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	58577327	58577327	A	C	SNP	CNOT1	ENST00000441024	human	ensembl	74_37	-1	known	missense	c.4618	p.F1540V	0.000	NULL	superfamily_ARM-type_fold	-	no_errors	CNOT1	HGNC	ENSG00000125107	tier1	-	-	31	0	0.00	36	8	18.18
CNOT3	0	genome.wustl.edu	37	19	54656009	54656009	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	54656009	54656009	C	T	SNP	CNOT3	ENST00000221232	human	ensembl	74_37	+1	known	missense	c.1652	p.A551V	1.000	pirsf_CCR4-NOT_su3/5	pfam_Not_N,pfam_NOT,pirsf_CCR4-NOT_su3/5	-	no_errors	CNOT3	HGNC	ENSG00000088038	tier1	-	-	43	0	0.00	16	34	68.00
CNTNAP2	0	genome.wustl.edu	37	7	148112873	148112873	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	148112873	148112873	A	-	DEL	CNTNAP2	ENST00000463592	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.048	-	-	-	no_errors	CNTNAP2	HGNC	ENSG00000174469	tier1			19	0	0.00	16	13	44.83
CNTNAP5	0	genome.wustl.edu	37	2	125547549	125547549	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	125547549	125547549	G	A	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	missense	c.2820	p.M940I	0.972	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052	tier1	-	-	46	0	0.00	37	10	21.28
COBLL1	0	genome.wustl.edu	37	2	165551296	165551296	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	165551296	165551296	A	-	DEL	COBLL1	ENST00000194871	human	ensembl	74_37	-1	known	frame_shift_del	c.2921	p.L974fs	0.972	NULL	pfam_Cordon-bleu_ubiquitin_domain,pfscan_WH2_dom	-	no_errors	COBLL1	HGNC	ENSG00000082438	tier1			18	0	0.00	11	6	35.29
COL11A1	0	genome.wustl.edu	37	1	103474067	103474067	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	103474067	103474067	C	-	DEL	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	frame_shift_del	c.1671	p.P558fs	0.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718	tier1			38	0	0.00	43	9	17.31
COL12A1	0	genome.wustl.edu	37	6	75836149	75836149	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	75836149	75836149	G	A	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	silent	c.6378	p.D2126	0.981	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1	-	-	28	0	0.00	14	18	56.25
COL4A3	0	genome.wustl.edu	37	2	228131180	228131180	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	228131180	228131180	G	T	SNP	COL4A3	ENST00000396578	human	ensembl	74_37	+1	known	missense	c.1363	p.G455C	1.000	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A3	HGNC	ENSG00000169031	tier1	-	-	44	0	0.00	35	26	42.62
COL5A1	0	genome.wustl.edu	37	9	137645711	137645711	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	137645711	137645711	G	A	SNP	COL5A1	ENST00000371817	human	ensembl	74_37	+1	known	missense	c.1735	p.G579R	0.965	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A1	HGNC	ENSG00000130635	tier1	-	-	50	0	0.00	64	6	8.57
COL6A5	0	genome.wustl.edu	37	3	130107894	130107894	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	130107894	130107894	G	C	SNP	COL6A5	ENST00000265379	human	ensembl	74_37	+1	known	missense	c.2333	p.S778T	0.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752				20	0	0.00	20	3	13.04
CORO1A	0	genome.wustl.edu	37	16	30198370	30198370	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	30198370	30198370	C	T	SNP	CORO1A	ENST00000219150	human	ensembl	74_37	+1	known	silent	c.462	p.N154	0.980	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_DUF1900,pfam_DUF1899,pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO1A	HGNC	ENSG00000102879	tier1	-	-	59	0	0.00	45	41	47.67
CORO1B	0	genome.wustl.edu	37	11	67209168	67209169	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	67209168	67209169	GG	-	DEL	CORO1B	ENST00000545016	human	ensembl	74_37	-1	known	frame_shift_del	c.490_489	p.H164fs	0.000:0.000	NULL	pfam_DUF1899,pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO1B	HGNC	ENSG00000172725	tier1			18	0	0.00	31	31	50.00
COX10	0	genome.wustl.edu	37	17	14095522	14095522	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	14095522	14095522	G	A	SNP	COX10	ENST00000261643	human	ensembl	74_37	+1	known	silent	c.912	p.T304	0.010	pfam_UbiA_prenyltransferase,pirsf_Protohaem_IX_farnesylTrfase_mt,tigrfam_Protohaem_IX_farnesylTrfase	pfam_UbiA_prenyltransferase,pirsf_Protohaem_IX_farnesylTrfase_mt,tigrfam_Protohaem_IX_farnesylTrfase	-	no_errors	COX10	HGNC	ENSG00000006695				70	0	0.00	103	12	10.43
COX16	0	genome.wustl.edu	37	14	70793016	70793017	+	RNA	DEL	AA	AA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	70793016	70793017	AA	-	DEL	COX16	ENST00000557612	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002:0.001	-	-	-	no_errors	COX16	HGNC	ENSG00000133983	tier1			22	0	0.00	21	8	27.59
COX7C	0	genome.wustl.edu	37	5	85913793	85913794	+	RNA	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	85913793	85913794	-	A	INS	COX7C	ENST00000505430	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	COX7C	HGNC	ENSG00000127184	tier1			41	0	0.00	33	10	23.26
CPEB2	0	genome.wustl.edu	37	4	15060881	15060881	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	15060881	15060881	G	A	SNP	CPEB2	ENST00000538197	human	ensembl	74_37	+1	known	missense	c.2651	p.R884Q	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CPEB2	HGNC	ENSG00000137449	tier1	-	-	51	0	0.00	69	18	20.69
CPED1	0	genome.wustl.edu	37	7	120691425	120691427	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	120691425	120691427	TTT	-	DEL	CPED1	ENST00000495036	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.653:0.693:0.715	-	-	-	no_errors	CPED1	HGNC	ENSG00000106034	tier1			17	0	0.00	14	4	22.22
CPSF1	0	genome.wustl.edu	37	8	145625613	145625613	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	145625613	145625613	G	-	DEL	CPSF1	ENST00000349769	human	ensembl	74_37	-1	known	frame_shift_del	c.884	p.P295fs	1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894	tier1			23	0	0.00	81	9	10.00
CPSF3L	0	genome.wustl.edu	37	1	1248015	1248015	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	1248015	1248015	C	T	SNP	CPSF3L	ENST00000540437	human	ensembl	74_37	-1	known	missense	c.1378	p.V460I	1.000	NULL	pfam_Beta_Casp,pfam_Beta-lactamas-like,pfam_RMMBL,smart_Beta-lactamas-like	-	no_errors	CPSF3L	HGNC	ENSG00000127054	tier1	-	-	28	0	0.00	29	11	27.50
CR2	0	genome.wustl.edu	37	1	207641843	207641844	+	RNA	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	207641843	207641844	-	T	INS	CR2	ENST00000485707	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.047:0.038	-	-	-	no_errors	CR2	HGNC	ENSG00000117322	tier1			24	0	0.00	19	8	29.63
CRAT	0	genome.wustl.edu	37	9	131864814	131864814	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	131864814	131864814	C	-	DEL	CRAT	ENST00000318080	human	ensembl	74_37	-1	known	frame_shift_del	c.495	p.K166fs	0.127	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CRAT	HGNC	ENSG00000095321	tier1			49	0	0.00	60	32	34.78
CREB3	0	genome.wustl.edu	37	9	35733097	35733097	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	35733097	35733097	C	T	SNP	CREB3	ENST00000353704	human	ensembl	74_37	+1	known	silent	c.234	p.D78	0.980	NULL	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	CREB3	HGNC	ENSG00000107175	tier1	-	-	43	0	0.00	40	10	20.00
CRIPAK	0	genome.wustl.edu	37	4	1388569	1388569	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	1388569	1388569	C	T	SNP	CRIPAK	ENST00000324803	human	ensembl	74_37	+1	known	silent	c.270	p.A90	0.000	NULL	smart_Post-SET_dom	-	no_errors	CRIPAK	HGNC	ENSG00000179979	tier1	-	-	170	0	0.00	379	76	16.70
CRMP1	0	genome.wustl.edu	37	4	5857915	5857915	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	5857915	5857915	A	G	SNP	CRMP1	ENST00000324989	human	ensembl	74_37	-1	known	missense	c.775	p.Y259H	1.000	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	CRMP1	HGNC	ENSG00000072832	tier1	-	-	62	0	0.00	24	56	70.00
CROCCP2	0	genome.wustl.edu	37	1	16945454	16945454	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	16945454	16945454	G	A	SNP	CROCCP2	ENST00000412962	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	tier1	-	-	71	0	0.00	104	9	7.83
CRYAA	0	genome.wustl.edu	37	21	44589921	44589921	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	21	44589921	44589921	C	-	DEL	CRYAA	ENST00000398133	human	ensembl	74_37	+1	putative	frame_shift_del	c.87	p.33fs	0.026	superfamily_HSP20-like_chaperone	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	-	no_errors	CRYAA	HGNC	ENSG00000160202	tier1			13	0	0.00	21	14	40.00
CSF2RA	0	genome.wustl.edu	37	X	1414467	1414467	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	1414467	1414467	C	T	SNP	CSF2RA	ENST00000491683	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.993	-	-	-	no_errors	CSF2RA	HGNC	ENSG00000198223	tier1	-	-	124	0	0.00	92	13	12.38
CSF3	0	genome.wustl.edu	37	17	38171995	38171995	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	38171995	38171995	C	-	DEL	CSF3	ENST00000225474	human	ensembl	74_37	+1	known	frame_shift_del	c.92	p.L33fs	0.000	pirsf_IL-6/IL-23/GCSF/MGF	pfam_IL-6/IL-23/GCSF/MGF,superfamily_4_helix_cytokine-like_core,smart_IL-6/IL-23/GCSF/MGF,pirsf_IL-6/IL-23/GCSF/MGF,prints_IL-6/IL-23/GCSF/MGF	-	no_errors	CSF3	HGNC	ENSG00000108342	tier1			27	0	0.00	33	9	21.43
CSMD3	0	genome.wustl.edu	37	8	113301669	113301669	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	113301669	113301669	G	A	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.9073	p.R3025C	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	32	0	0.00	48	12	20.00
CSMD3	0	genome.wustl.edu	37	8	113308228	113308228	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	113308228	113308228	A	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.8448	p.H2816Q	1.000	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	53	0	0.00	58	49	45.79
CSMD3	0	genome.wustl.edu	37	8	113529438	113529438	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	113529438	113529438	C	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	silent	c.4581	p.A1527	0.080	superfamily_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	44	0	0.00	111	15	11.90
CSNK1G2-AS1	0	genome.wustl.edu	37	19	1954193	1954193	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	1954193	1954193	C	T	SNP	CSNK1G2-AS1	ENST00000314315	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CSNK1G2-AS1	HGNC	ENSG00000180846	tier1	-	-	35	0	0.00	40	29	42.03
CSNK2A1	0	genome.wustl.edu	37	20	485835	485835	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	485835	485835	C	T	SNP	CSNK2A1	ENST00000217244	human	ensembl	74_37	-1	known	missense	c.140	p.R47Q	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CSNK2A1	HGNC	ENSG00000101266	tier1	-	-	70	0	0.00	40	12	23.08
CSPG4	0	genome.wustl.edu	37	15	75983102	75983103	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	75983102	75983103	TC	-	DEL	CSPG4	ENST00000308508	human	ensembl	74_37	-1	known	frame_shift_del	c.304_303	p.E101fs	0.000:0.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	-	no_errors	CSPG4	HGNC	ENSG00000173546	tier1			95	0	0.00	104	29	21.80
CST4	0	genome.wustl.edu	37	20	23667826	23667826	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	23667826	23667826	C	-	DEL	CST4	ENST00000217423	human	ensembl	74_37	-1	known	frame_shift_del	c.241	p.V81fs	0.000	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	CST4	HGNC	ENSG00000101441	tier1			65	0	0.00	180	39	17.81
CSTF2T	0	genome.wustl.edu	37	10	53459077	53459077	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	53459077	53459077	T	C	SNP	CSTF2T	ENST00000331173	human	ensembl	74_37	-1	known	missense	c.233	p.N78S	0.999	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CSTF2T	HGNC	ENSG00000177613	tier1	-	-	34	0	0.00	31	15	32.61
CTDP1	0	genome.wustl.edu	37	18	77474867	77474867	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	77474867	77474867	C	T	SNP	CTDP1	ENST00000299543	human	ensembl	74_37	+1	known	silent	c.1407	p.S469	0.000	NULL	pfam_FCP1_C,pfam_NIF,superfamily_HAD-like_dom,superfamily_BRCT_dom,superfamily_Single_hybrid_motif,smart_NIF,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_NIF,tigrfam_FCP1_euk	-	no_errors	CTDP1	HGNC	ENSG00000060069	tier1	-	-	9	0	0.00	25	9	26.47
CTSC	0	genome.wustl.edu	37	11	88068234	88068234	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	88068234	88068234	T	0	DEL	CTSC	ENST00000227266	human	ensembl	74_37	-1	known	frame_shift_del	c.189	p.V64fs	0.999	pfam_CathepsinC_exc	pfam_Peptidase_C1A_C,pfam_CathepsinC_exc,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSC	HGNC	ENSG00000109861				24	0	0.00	19	9	32.14
CTTNBP2NL	0	genome.wustl.edu	37	1	112999148	112999148	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	112999148	112999148	A	G	SNP	CTTNBP2NL	ENST00000271277	human	ensembl	74_37	+1	known	missense	c.1034	p.Y345C	0.981	NULL	pfam_Cortactin-binding_p2_N	-	no_errors	CTTNBP2NL	HGNC	ENSG00000143079	tier1	-	-	18	0	0.00	7	16	69.57
CUX1	0	genome.wustl.edu	37	7	101845168	101845168	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	101845168	101845168	G	T	SNP	CUX1	ENST00000360264	human	ensembl	74_37	+1	known	missense	c.2624	p.R875L	0.187	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_LemA-like_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX1	HGNC	ENSG00000257923	tier1	-	-	43	0	0.00	61	40	39.60
CUX2	0	genome.wustl.edu	37	12	111748477	111748477	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	111748477	111748477	C	T	SNP	CUX2	ENST00000261726	human	ensembl	74_37	+1	known	missense	c.1891	p.R631W	1.000	superfamily_Lambda_DNA-bd_dom,pfscan_Hmoeo_CUT	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_Prefoldin,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX2	HGNC	ENSG00000111249	tier1	-	-	13	0	0.00	17	6	26.09
CXCR2	0	genome.wustl.edu	37	2	219000454	219000454	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	219000454	219000454	C	-	DEL	CXCR2	ENST00000318507	human	ensembl	74_37	+1	known	frame_shift_del	c.930	p.L312fs	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CXCR_1/2,prints_GPCR_Rhodpsn,prints_Chemokine_CXCR2,prints_Chemokine_rcpt,prints_Chemokine_CXCR4	-	no_errors	CXCR2	HGNC	ENSG00000180871	tier1			29	0	0.00	37	26	41.27
CXXC11	0	genome.wustl.edu	37	2	242814375	242814375	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	242814375	242814375	C	-	DEL	CXXC11	ENST00000343216	human	ensembl	74_37	+1	known	frame_shift_del	c.668	p.P225fs	0.000	NULL	NULL	-	no_errors	CXXC11	HGNC	ENSG00000188011	tier1			34	0	0.00	39	28	41.79
CXorf36	0	genome.wustl.edu	37	X	45051221	45051221	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	45051221	45051221	G	A	SNP	CXorf36	ENST00000398000	human	ensembl	74_37	-1	known	silent	c.273	p.P91	0.001	NULL	NULL	-	no_errors	CXorf36	HGNC	ENSG00000147113	tier1	rs141296501	-	29	0	0.00	10	25	71.43
CYB561A3	0	genome.wustl.edu	37	11	61124145	61124145	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	61124145	61124145	C	T	SNP	CYB561A3	ENST00000426130	human	ensembl	74_37	-1	known	missense	c.92	p.G31E	0.555	pfscan_Cyt_b561/ferric_Rdtase_TM	pfam_Cyt_b561_euk,smart_Cyt_b561/ferric_Rdtase_TM,pfscan_Cyt_b561/ferric_Rdtase_TM	-	no_errors	CYB561A3	HGNC	ENSG00000162144	tier1	-	-	32	0	0.00	28	11	28.21
CYP27A1	0	genome.wustl.edu	37	2	219674399	219674399	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	219674399	219674399	C	T	SNP	CYP27A1	ENST00000258415	human	ensembl	74_37	+1	known	missense	c.355	p.R119W	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	-	no_errors	CYP27A1	HGNC	ENSG00000135929	tier1	-	-	30	0	0.00	46	27	36.99
CYP4F3	0	genome.wustl.edu	37	19	15769134	15769134	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	15769134	15769134	T	C	SNP	CYP4F3	ENST00000221307	human	ensembl	74_37	+1	known	silent	c.1176	p.H392	0.894	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F3	HGNC	ENSG00000186529	tier1	-	-	53	0	0.00	53	36	40.45
DAAM1	0	genome.wustl.edu	37	14	59835592	59835592	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	59835592	59835592	T	-	DEL	DAAM1	ENST00000553966	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.059	-	-	-	no_errors	DAAM1	HGNC	ENSG00000100592	tier1			38	0	0.00	14	31	68.89
DAZAP1	0	genome.wustl.edu	37	19	1434830	1434830	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	1434830	1434830	G	-	DEL	DAZAP1	ENST00000233078	human	ensembl	74_37	+1	known	frame_shift_del	c.1143	p.G383fs	0.048	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	DAZAP1	HGNC	ENSG00000071626	tier1			42	0	0.00	91	29	24.17
DBNL	0	genome.wustl.edu	37	7	44101106	44101106	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	44101106	44101106	G	A	SNP	DBNL	ENST00000497184	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DBNL	HGNC	ENSG00000136279	tier1	-	-	37	0	0.00	43	36	45.00
DCAF8L2	0	genome.wustl.edu	37	X	27765039	27765039	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	27765039	27765039	C	T	SNP	DCAF8L2	ENST00000451261	human	ensembl	74_37	+1	known	silent	c.27	p.D9	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF8L2	HGNC	ENSG00000189186	tier1	-	-	10	0	0.00	2	16	88.89
DCC	0	genome.wustl.edu	37	18	50592505	50592505	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	50592505	50592505	G	T	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	missense	c.1230	p.Q410H	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323	tier1	-	-	80	0	0.00	47	13	21.67
DCHS1	0	genome.wustl.edu	37	11	6655411	6655411	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	6655411	6655411	G	A	SNP	DCHS1	ENST00000299441	human	ensembl	74_37	-1	known	missense	c.1924	p.R642W	0.002	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS1	HGNC	ENSG00000166341	tier1	-	-	28	0	0.00	29	41	58.57
DCHS2	0	genome.wustl.edu	37	4	155253834	155253834	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	155253834	155253834	T	C	SNP	DCHS2	ENST00000357232	human	ensembl	74_37	-1	known	missense	c.2029	p.T677A	0.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410	tier1	-	-	51	0	0.00	25	8	24.24
DCST1	0	genome.wustl.edu	37	1	155007018	155007018	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	155007018	155007018	G	-	DEL	DCST1	ENST00000295542	human	ensembl	74_37	+1	known	frame_shift_del	c.169	p.L59fs	0.954	NULL	pfam_DC_STAMP-like,pfscan_Znf_RING	-	no_errors	DCST1	HGNC	ENSG00000163357	tier1			51	0	0.00	58	17	22.67
DDX11	0	genome.wustl.edu	37	12	31256314	31256314	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	31256314	31256314	G	A	SNP	DDX11	ENST00000407793	human	ensembl	74_37	+1	known	missense	c.2516	p.R839H	1.000	smart_ATP-dep_Helicase_C	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	DDX11	HGNC	ENSG00000013573	tier1	-	-	64	0	0.00	84	40	32.26
DDX19B	0	genome.wustl.edu	37	16	70351424	70351425	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	70351424	70351425	TA	-	DEL	DDX19B	ENST00000288071	human	ensembl	74_37	+1	known	frame_shift_del	c.322_323	p.Y108fs	1.000:1.000	pfscan_RNA_helicase_DEAD_Q_motif	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX19B	HGNC	ENSG00000157349	tier1			45	0	0.00	63	35	35.71
DDX23	0	genome.wustl.edu	37	12	49226301	49226301	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	49226301	49226301	T	C	SNP	DDX23	ENST00000308025	human	ensembl	74_37	-1	known	missense	c.1859	p.Y620C	1.000	superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX23	HGNC	ENSG00000174243				15	0	0.00	38	4	9.52
DDX28	0	genome.wustl.edu	37	16	68056444	68056444	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	68056444	68056444	G	T	SNP	DDX28	ENST00000332395	human	ensembl	74_37	-1	known	missense	c.662	p.A221D	0.022	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX28	HGNC	ENSG00000182810	tier1	-	-	41	0	0.00	41	65	60.75
DDX54	0	genome.wustl.edu	37	12	113599199	113599199	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	113599199	113599199	C	T	SNP	DDX54	ENST00000549271	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	DDX54	HGNC	ENSG00000123064	tier1	-	-	35	0	0.00	49	20	28.99
DDX59	0	genome.wustl.edu	37	1	200594042	200594042	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	200594042	200594042	T	-	DEL	DDX59	ENST00000447706	human	ensembl	74_37	-1	known	frame_shift_del	c.1730	p.N577fs	0.001	pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Znf_HIT,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX59	HGNC	ENSG00000118197	tier1			54	0	0.00	30	30	50.00
DENND1C	0	genome.wustl.edu	37	19	6475732	6475732	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	6475732	6475732	G	A	SNP	DENND1C	ENST00000381480	human	ensembl	74_37	-1	known	silent	c.810	p.H270	0.998	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND1C	HGNC	ENSG00000205744	tier1	-	-	17	0	0.00	32	25	43.86
DENND2C	0	genome.wustl.edu	37	1	115168367	115168367	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	115168367	115168367	C	T	SNP	DENND2C	ENST00000393274	human	ensembl	74_37	-1	known	missense	c.239	p.G80D	0.009	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND2C	HGNC	ENSG00000175984	tier1	-	-	54	0	0.00	36	30	45.45
DENND4B	0	genome.wustl.edu	37	1	153914345	153914345	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	153914345	153914345	G	A	SNP	DENND4B	ENST00000361217	human	ensembl	74_37	-1	known	missense	c.1055	p.A352V	1.000	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4B	HGNC	ENSG00000198837	tier1	-	-	36	0	0.00	46	23	33.33
DENND4B	0	genome.wustl.edu	37	1	153914758	153914758	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	153914758	153914758	G	A	SNP	DENND4B	ENST00000361217	human	ensembl	74_37	-1	known	missense	c.715	p.P239S	1.000	pfam_uDENN_dom,smart_uDENN_dom,pfscan_uDENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND4B	HGNC	ENSG00000198837	tier1	-	-	23	0	0.00	34	25	42.37
DENND5A	0	genome.wustl.edu	37	11	9164987	9164987	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	9164987	9164987	T	C	SNP	DENND5A	ENST00000328194	human	ensembl	74_37	-1	known	missense	c.3350	p.N1117S	1.000	NULL	pfam_DENN_dom,pfam_Run,pfam_uDENN_dom,pfam_dDENN_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_Run,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_PLAT/LH2_dom,pfscan_Run	-	no_errors	DENND5A	HGNC	ENSG00000184014	tier1	-	-	26	0	0.00	14	20	58.82
DGCR6L	0	genome.wustl.edu	37	22	20303643	20303643	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	20303643	20303643	T	A	SNP	DGCR6L	ENST00000248879	human	ensembl	74_37	-1	known	missense	c.371	p.E124V	1.000	pfam_DGCR6	pfam_DGCR6	-	no_errors	DGCR6L	HGNC	ENSG00000128185	tier1	-	-	78	0	0.00	84	43	33.59
DGCR8	0	genome.wustl.edu	37	22	20077689	20077689	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	20077689	20077689	C	T	SNP	DGCR8	ENST00000351989	human	ensembl	74_37	+1	known	missense	c.1214	p.P405L	0.000	NULL	pfam_dsRNA-bd_dom,superfamily_WW_dom,smart_WW_dom,smart_dsRNA-bd_dom,pfscan_WW_dom,pfscan_dsRNA-bd_dom	-	no_errors	DGCR8	HGNC	ENSG00000128191	tier1	-	-	13	0	0.00	15	17	53.12
DGKD	0	genome.wustl.edu	37	2	234294806	234294806	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	234294806	234294806	T	-	DEL	DGKD	ENST00000489613	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	DGKD	HGNC	ENSG00000077044	tier1			22	0	0.00	28	13	31.71
DIAPH1	0	genome.wustl.edu	37	5	140953564	140953566	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	140953564	140953566	GGA	-	DEL	DIAPH1	ENST00000253811	human	ensembl	74_37	-1	known	in_frame_del	c.1853_1851	p.P620in_frame_del	0.010:0.008:0.007	pfam_Formin_homology_1	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Formin_homology_1,pfam_Drf_DAD,superfamily_ARM-type_fold,superfamily_tRNA-bd_arm,smart_FH2_Formin	-	no_errors	DIAPH1	HGNC	ENSG00000131504	tier1			10	0	0.00	13	3	18.75
DIDO1	0	genome.wustl.edu	37	20	61524253	61524253	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	61524253	61524253	T	C	SNP	DIDO1	ENST00000266070	human	ensembl	74_37	-1	known	missense	c.3163	p.T1055A	1.000	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	DIDO1	HGNC	ENSG00000101191	tier1	-	-	54	0	0.00	42	27	39.13
DIS3L2	0	genome.wustl.edu	37	2	232995570	232995570	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	232995570	232995570	A	-	DEL	DIS3L2	ENST00000470087	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DIS3L2	HGNC	ENSG00000144535	tier1			10	0	0.00	11	5	31.25
DLC1	0	genome.wustl.edu	37	8	12957055	12957055	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	12957055	12957055	C	T	SNP	DLC1	ENST00000276297	human	ensembl	74_37	-1	known	missense	c.2791	p.G931R	1.000	NULL	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	DLC1	HGNC	ENSG00000164741	tier1	-	-	49	0	0.00	21	42	66.67
DLD	0	genome.wustl.edu	37	7	107557313	107557313	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	107557313	107557313	C	A	SNP	DLD	ENST00000205402	human	ensembl	74_37	+1	known	missense	c.950	p.P317H	1.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,prints_FAD_pyr_nucl-diS_OxRdtase,tigrfam_Lipoamide_DH	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_nucl-diS_OxRdtase_dimer,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_FAD_bind_dom,pfam_GIDA-rel,superfamily_FAD/NAD-linked_Rdtase_dimer,prints_FAD_pyr_nucl-diS_OxRdtase,prints_Hg_reductase,prints_Pyridine_nuc-diS_OxRdtase_2,tigrfam_Lipoamide_DH	-	no_errors	DLD	HGNC	ENSG00000091140	tier1	-	-	55	0	0.00	122	34	21.79
DLG2	0	genome.wustl.edu	37	11	84996271	84996271	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	84996271	84996271	G	A	SNP	DLG2	ENST00000376104	human	ensembl	74_37	-1	known	missense	c.179	p.S60F	0.001	pirsf_M-assoc_guanylate_kinase	pfam_PDZ,pfam_GK/Ca_channel_bsu,pfam_MAGUK_PEST_N,pfam_PDZ_assoc,pfam_L27_1,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG2	HGNC	ENSG00000150672	tier1	-	-	57	0	0.00	53	37	41.11
DLG5	0	genome.wustl.edu	37	10	79579660	79579660	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	79579660	79579660	C	T	SNP	DLG5	ENST00000372391	human	ensembl	74_37	-1	known	silent	c.3519	p.P1173	0.069	NULL	pfam_PDZ,pfam_DUF622,pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,superfamily_PDZ,superfamily_SH3_domain,superfamily_DEATH-like_dom,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_CARD,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG5	HGNC	ENSG00000151208	tier1	-	-	37	0	0.00	35	6	14.63
DLGAP1	0	genome.wustl.edu	37	18	3534565	3534565	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	3534565	3534565	G	A	SNP	DLGAP1	ENST00000315677	human	ensembl	74_37	-1	known	silent	c.2106	p.A702	0.415	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP1	HGNC	ENSG00000170579	tier1	-	-	11	0	0.00	13	14	51.85
DMTN	0	genome.wustl.edu	37	8	21926552	21926552	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	21926552	21926552	C	-	DEL	DMTN	ENST00000265800	human	ensembl	74_37	+1	known	frame_shift_del	c.275	p.P94fs	1.000	NULL	pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin_headpiece,pfscan_Villin_headpiece	-	no_errors	DMTN	HGNC	ENSG00000158856	tier1			27	0	0.00	13	13	50.00
DNAH1	0	genome.wustl.edu	37	3	52397145	52397145	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	52397145	52397145	G	T	SNP	DNAH1	ENST00000420323	human	ensembl	74_37	+1	known	missense	c.5229	p.E1743D	1.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	-	no_errors	DNAH1	HGNC	ENSG00000114841	tier1	-	-	43	0	0.00	25	20	44.44
DNAH10	0	genome.wustl.edu	37	12	124417966	124417966	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	124417966	124417966	G	A	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	missense	c.13031	p.R4344Q	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	tier1	-	-	44	0	0.00	33	48	59.26
DNAH5	0	genome.wustl.edu	37	5	13839629	13839629	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	13839629	13839629	C	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.5718	p.M1906I	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139				18	0	0.00	54	7	11.48
DNAJC19	0	genome.wustl.edu	37	3	180705810	180705810	+	Splice_Site	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	180705810	180705810	C	T	SNP	DNAJC19	ENST00000382564	human	ensembl	74_37	-1	known	splice_site	c.129+1	e3+1	1.000	-	-	-	no_errors	DNAJC19	HGNC	ENSG00000205981	tier1	-	-	21	0	0.00	42	12	22.22
DNAJC2	0	genome.wustl.edu	37	7	102964992	102964992	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	102964992	102964992	T	-	DEL	DNAJC2	ENST00000379263	human	ensembl	74_37	-1	known	frame_shift_del	c.590	p.N197fs	1.000	NULL	pfam_SANT/Myb,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_Homeodomain-like,smart_DnaJ_domain,smart_SANT/Myb,pfscan_Myb-like_dom,pfscan_DnaJ_domain	-	no_errors	DNAJC2	HGNC	ENSG00000105821	tier1			16	0	0.00	29	13	30.95
DOCK1	0	genome.wustl.edu	37	10	128841421	128841421	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	128841421	128841421	G	A	SNP	DOCK1	ENST00000280333	human	ensembl	74_37	+1	known	missense	c.2131	p.A711T	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,superfamily_Cyt_c-like_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK1	HGNC	ENSG00000150760	tier1	-	-	34	0	0.00	26	18	40.91
DOCK3	0	genome.wustl.edu	37	3	51417604	51417604	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	51417604	51417604	C	-	DEL	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	frame_shift_del	c.5549	p.P1852fs	0.115	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538	tier1			43	0	0.00	22	28	56.00
DOK1	0	genome.wustl.edu	37	2	74782459	74782459	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	74782459	74782459	C	-	DEL	DOK1	ENST00000233668	human	ensembl	74_37	+1	known	frame_shift_del	c.239	p.P82fs	1.000	smart_Pleckstrin_homology	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	-	no_errors	DOK1	HGNC	ENSG00000115325	tier1			45	0	0.00	89	44	33.08
DOPEY1	0	genome.wustl.edu	37	6	83819909	83819909	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	83819909	83819909	G	-	DEL	DOPEY1	ENST00000349129	human	ensembl	74_37	+1	known	frame_shift_del	c.557	p.G187fs	1.000	pfam_Dopey_N,superfamily_ARM-type_fold	pfam_Dopey_N,superfamily_ARM-type_fold	-	no_errors	DOPEY1	HGNC	ENSG00000083097	tier1			52	0	0.00	38	32	45.71
DROSHA	0	genome.wustl.edu	37	5	31431690	31431690	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	31431690	31431690	C	T	SNP	DROSHA	ENST00000344624	human	ensembl	74_37	-1	known	silent	c.3138	p.A1046	0.247	pfam_RNase_III_dom,superfamily_RNase_III_dom,smart_RNase_III_dom,pfscan_RNase_III_dom	pfam_RNase_III_dom,pfam_dsRNA-bd_dom,superfamily_RNase_III_dom,smart_RNase_III_dom,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom,pfscan_RNase_III_dom	-	no_errors	DROSHA	HGNC	ENSG00000113360	tier1	-	-	28	0	0.00	70	7	9.09
DST	0	genome.wustl.edu	37	6	56335022	56335022	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	56335022	56335022	G	A	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	silent	c.22287	p.G7429	0.916	superfamily_ABC1_TM_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	37	0	0.00	25	5	16.67
DTX2	0	genome.wustl.edu	37	7	76131626	76131626	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	76131626	76131626	C	T	SNP	DTX2	ENST00000324432	human	ensembl	74_37	+1	known	silent	c.1242	p.I414	1.000	smart_Znf_RING,pfscan_Znf_RING	pfam_WWE-dom,smart_WWE-dom_subgr,smart_Znf_RING,pfscan_WWE-dom,pfscan_Znf_RING	-	no_errors	DTX2	HGNC	ENSG00000091073	tier1	-	-	52	0	0.00	66	38	36.54
DUPD1	0	genome.wustl.edu	37	10	76803696	76803696	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	76803696	76803696	C	T	SNP	DUPD1	ENST00000338487	human	ensembl	74_37	-1	known	missense	c.280	p.V94M	1.000	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP_famA,prints_Atypical_DUSP	-	no_errors	DUPD1	HGNC	ENSG00000188716	tier1	-	-	28	0	0.00	58	14	19.44
DUS2	0	genome.wustl.edu	37	16	68088489	68088489	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	68088489	68088489	G	A	SNP	DUS2	ENST00000358896	human	ensembl	74_37	+1	known	missense	c.277	p.A93T	0.999	pfam_tRNA_hU_synthase	pfam_tRNA_hU_synthase,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom	-	no_errors	DUS2	HGNC	ENSG00000167264	tier1	-	-	95	0	0.00	217	31	12.50
DUSP10	0	genome.wustl.edu	37	1	221874930	221874932	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	221874930	221874932	AAA	-	DEL	DUSP10	ENST00000468085	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.966:0.957:0.948	-	-	-	no_errors	DUSP10	HGNC	ENSG00000143507	tier1			12	0	0.00	9	6	40.00
DUSP10	0	genome.wustl.edu	37	1	221875662	221875662	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	221875662	221875662	A	-	DEL	DUSP10	ENST00000468085	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.040	-	-	-	no_errors	DUSP10	HGNC	ENSG00000143507	tier1			23	0	0.00	11	11	50.00
DUSP26	0	genome.wustl.edu	37	8	33449611	33449611	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	33449611	33449611	G	A	SNP	DUSP26	ENST00000256261	human	ensembl	74_37	-1	known	nonsense	c.556	p.R186*	1.000	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP_famA,prints_Atypical_DUSP	-	no_errors	DUSP26	HGNC	ENSG00000133878	tier1	-	-	43	0	0.00	22	33	60.00
DZIP1L	0	genome.wustl.edu	37	3	137811298	137811299	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	137811298	137811299	-	C	INS	DZIP1L	ENST00000327532	human	ensembl	74_37	-1	known	frame_shift_ins	c.797_796	p.E266fs	1.000:0.998	NULL	pfscan_Znf_C2H2	-	no_errors	DZIP1L	HGNC	ENSG00000158163	tier1			34	0	0.00	30	14	31.82
E2F4	0	genome.wustl.edu	37	16	67229794	67229796	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	67229794	67229796	CAG	-	DEL	E2F4	ENST00000379378	human	ensembl	74_37	+1	known	in_frame_del	c.918_920	p.S310in_frame_del	0.995:0.995:0.995	NULL	pfam_E2F_TDP	-	no_errors	E2F4	HGNC	ENSG00000205250	tier1			37	0	0.00	119	26	17.93
EAF1-AS1	0	genome.wustl.edu	37	3	15480599	15480599	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	15480599	15480599	T	-	DEL	EAF1-AS1	ENST00000494875	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.925	-	-	-	no_errors	EAF1-AS1	HGNC	ENSG00000249786	tier1			26	0	0.00	25	9	26.47
EBPL	0	genome.wustl.edu	37	13	50235209	50235209	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	50235209	50235209	A	-	DEL	EBPL	ENST00000242827	human	ensembl	74_37	-1	known	frame_shift_del	c.516	p.F172fs	0.997	pfam_EBP	pfam_EBP	-	no_errors	EBPL	HGNC	ENSG00000123179	tier1			36	0	0.00	33	9	21.43
EDC4	0	genome.wustl.edu	37	16	67916729	67916729	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	67916729	67916729	G	A	SNP	EDC4	ENST00000358933	human	ensembl	74_37	+1	known	missense	c.3590	p.R1197H	1.000	NULL	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EDC4	HGNC	ENSG00000038358	tier1	-	-	43	0	0.00	130	14	9.72
EDIL3	0	genome.wustl.edu	37	5	83239319	83239319	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	83239319	83239319	T	C	SNP	EDIL3	ENST00000296591	human	ensembl	74_37	-1	known	silent	c.1362	p.R454	0.983	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,pfam_EGF_extracell,superfamily_Galactose-bd-like,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Coagulation_fac_5/8-C_type_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	EDIL3	HGNC	ENSG00000164176	tier1	-	-	72	0	0.00	35	13	27.08
EEF2	0	genome.wustl.edu	37	19	3984216	3984216	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	3984216	3984216	T	C	SNP	EEF2	ENST00000309311	human	ensembl	74_37	-1	known	missense	c.136	p.I46V	1.000	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,tigrfam_Small_GTP-bd_dom	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFG/EF2_IV,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Transl_B-barrel,superfamily_EFG_III-V,smart_Transl_elong_EFG/EF2_IV,smart_EFG_V,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EEF2	HGNC	ENSG00000167658	tier1	-	-	84	0	0.00	46	66	58.93
EEPD1	0	genome.wustl.edu	37	7	36194797	36194797	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	36194797	36194797	A	G	SNP	EEPD1	ENST00000242108	human	ensembl	74_37	+1	known	silent	c.864	p.T288	0.360	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	pfam_HhH_motif,pfam_Endo/exonuclease/phosphatase,pfam_GspK,superfamily_Endo/exonuclease/phosphatase,superfamily_RuvA_2-like,smart_Hlx-hairpin-Hlx_DNA-bd_motif,tigrfam_Competence_ComEA_HhH	-	no_errors	EEPD1	HGNC	ENSG00000122547	tier1	-	-	21	0	0.00	32	6	15.38
EFNA1	0	genome.wustl.edu	37	1	155100484	155100484	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	155100484	155100484	C	A	SNP	EFNA1	ENST00000368407	human	ensembl	74_37	+1	known	missense	c.31	p.L11M	0.999	NULL	pfam_Ephrin,superfamily_Cupredoxin,prints_Ephrin	-	no_errors	EFNA1	HGNC	ENSG00000169242	tier1	-	-	51	0	0.00	53	20	27.40
EGFLAM	0	genome.wustl.edu	37	5	38438444	38438444	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	38438444	38438444	C	T	SNP	EGFLAM	ENST00000354891	human	ensembl	74_37	+1	known	missense	c.2351	p.A784V	0.535	superfamily_ConA-like_lec_gl_sf,pfscan_EG-like_dom,pfscan_Laminin_G	pfam_Laminin_G,pfam_Fibronectin_type3,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Laminin_G	-	no_errors	EGFLAM	HGNC	ENSG00000164318	tier1	rs200259259	-	40	0	0.00	86	30	25.86
EGFR	0	genome.wustl.edu	37	7	55231514	55231514	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	55231514	55231514	C	T	SNP	EGFR	ENST00000275493	human	ensembl	74_37	+1	known	missense	c.1720	p.R574W	0.987	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	EGFR	HGNC	ENSG00000146648	tier1	-	-	11	0	0.00	17	7	29.17
EI24	0	genome.wustl.edu	37	11	125454387	125454387	+	RNA	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	125454387	125454387	G	T	SNP	EI24	ENST00000530985	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.925	-	-	-	no_errors	EI24	HGNC	ENSG00000149547	tier1	-	-	37	0	0.00	22	25	52.08
EIF2B5	0	genome.wustl.edu	37	3	183854553	183854553	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	183854553	183854553	T	-	DEL	EIF2B5	ENST00000471832	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	EIF2B5	HGNC	ENSG00000145191	tier1			17	0	0.00	23	7	23.33
EIF5A2	0	genome.wustl.edu	37	3	170611036	170611037	+	RNA	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	170611036	170611037	-	A	INS	EIF5A2	ENST00000460117	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.202:0.244	-	-	-	no_errors	EIF5A2	HGNC	ENSG00000163577	tier1			12	0	0.00	26	6	18.75
ELAVL2	0	genome.wustl.edu	37	9	23704941	23704941	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	23704941	23704941	A	G	SNP	ELAVL2	ENST00000380117	human	ensembl	74_37	-1	known	silent	c.462	p.S154	0.993	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL2	HGNC	ENSG00000107105	tier1	-	-	17	0	0.00	14	10	40.00
ELAVL3	0	genome.wustl.edu	37	19	11577605	11577605	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	11577605	11577605	C	-	DEL	ELAVL3	ENST00000359227	human	ensembl	74_37	-1	known	frame_shift_del	c.47	p.G16fs	1.000	NULL	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL3	HGNC	ENSG00000196361	tier1			17	0	0.00	34	15	30.61
ELMO2	0	genome.wustl.edu	37	20	45000560	45000560	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	45000560	45000560	G	T	SNP	ELMO2	ENST00000439931	human	ensembl	74_37	-1	known	missense	c.1501	p.P501T	1.000	NULL	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO2	HGNC	ENSG00000062598	tier1	-	-	30	0	0.00	53	11	17.19
EML4	0	genome.wustl.edu	37	2	42490438	42490438	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	42490438	42490438	T	C	SNP	EML4	ENST00000318522	human	ensembl	74_37	+1	known	silent	c.633	p.T211	0.072	NULL	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML4	HGNC	ENSG00000143924	tier1	-	-	72	0	0.00	77	30	28.04
EML4	0	genome.wustl.edu	37	2	42492077	42492077	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	42492077	42492077	A	-	DEL	EML4	ENST00000401738	human	ensembl	74_37	+1	novel	frame_shift_del	c.686	p.N231fs	1.000	NULL	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML4	HGNC	ENSG00000143924	tier1			38	0	0.00	39	30	43.48
EML4	0	genome.wustl.edu	37	2	42557121	42557121	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	42557121	42557121	A	G	SNP	EML4	ENST00000318522	human	ensembl	74_37	+1	known	missense	c.2720	p.N907S	0.006	NULL	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML4	HGNC	ENSG00000143924	tier1	-	-	25	0	0.00	15	16	51.61
EMP1	0	genome.wustl.edu	37	12	13364427	13364427	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	13364427	13364427	A	-	DEL	EMP1	ENST00000542289	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EMP1	HGNC	ENSG00000134531	tier1			44	0	0.00	43	11	20.37
ENC1	0	genome.wustl.edu	37	5	73931058	73931058	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	73931058	73931058	T	C	SNP	ENC1	ENST00000302351	human	ensembl	74_37	-1	known	missense	c.1253	p.D418G	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	ENC1	HGNC	ENSG00000171617	tier1	-	-	19	0	0.00	6	7	53.85
ENO1	0	genome.wustl.edu	37	1	8928104	8928104	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	8928104	8928104	T	C	SNP	ENO1	ENST00000234590	human	ensembl	74_37	-1	known	missense	c.253	p.T85A	0.442	pfam_Enolase_N,pirsf_Enolase,tigrfam_Enolase	pfam_Enolase_C,pfam_Enolase_N,pirsf_Enolase,prints_Enolase,tigrfam_Enolase	-	no_errors	ENO1	HGNC	ENSG00000074800	tier1	-	-	41	0	0.00	19	30	61.22
ENOX2	0	genome.wustl.edu	37	X	129804065	129804065	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	129804065	129804065	G	A	SNP	ENOX2	ENST00000338144	human	ensembl	74_37	-1	known	missense	c.655	p.R219C	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ENOX2	HGNC	ENSG00000165675	tier1	-	-	30	0	0.00	21	72	76.60
ENPP7	0	genome.wustl.edu	37	17	77710926	77710926	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	77710926	77710926	T	C	SNP	ENPP7	ENST00000328313	human	ensembl	74_37	+1	known	silent	c.1113	p.P371	0.967	superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,pfam_Metalloenzyme,superfamily_Alkaline_phosphatase_core	-	no_errors	ENPP7	HGNC	ENSG00000182156	tier1	-	-	28	0	0.00	38	20	34.48
ENSG00000161103	0	genome.wustl.edu	37	22	18839230	18839230	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	18839230	18839230	G	A	SNP	ENSG00000161103	ENST00000412938	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	AC008132.13	Clone_based_vega_gene	ENSG00000161103	tier1	-	-	29	0	0.00	46	12	20.69
ENSG00000161103	0	genome.wustl.edu	37	22	18844558	18844558	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	18844558	18844558	C	T	SNP	ENSG00000161103	ENST00000412938	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.097	-	-	-	no_errors	AC008132.13	Clone_based_vega_gene	ENSG00000161103				13	0	0.00	30	4	11.76
ENSG00000173213	0	genome.wustl.edu	37	18	49506	49506	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	49506	49506	C	T	SNP	ENSG00000173213	ENST00000308911	human	ensembl	74_37	-1	known	missense	c.52	p.A18T	0.997	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,prints_Tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	RP11-683L23.1	Clone_based_vega_gene	ENSG00000173213	tier1	-	-	238	0	0.00	656	122	15.64
ENSG00000203849	0	genome.wustl.edu	37	1	142714101	142714102	+	RNA	INS	-	-	AC			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	142714101	142714102	-	AC	INS	ENSG00000203849	ENST00000369381	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.029:0.051	-	-	-	no_errors	RP11-417J8.6	Clone_based_vega_gene	ENSG00000203849	tier1			27	0	0.00	26	7	21.21
ENSG00000207091	0	genome.wustl.edu	37	15	34607028	34607029	+	RNA	DEL	AA	AA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	34607028	34607029	AA	-	DEL	ENSG00000207091	ENST00000384363	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.866:0.852	-	-	-	no_errors	Y_RNA	RFAM	ENSG00000207091	tier1			8	0	0.00	5	2	28.57
ENSG00000211518	0	genome.wustl.edu	37	7	88269891	88269892	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	88269891	88269892	TT	-	DEL	ENSG00000211518	ENST00000390184	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.475:0.436	-	-	-	no_errors	AC006988.1	Clone_based_ensembl_gene	ENSG00000211518	tier1			20	0	0.00	9	4	30.77
ENSG00000212045	0	genome.wustl.edu	37	4	29751861	29751861	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	29751861	29751861	A	-	DEL	ENSG00000212045	ENST00000390756	human	ensembl	74_37	+1	novel	rna	NULL	NULL	1.000	-	-	-	no_errors	AC109351.1	Clone_based_ensembl_gene	ENSG00000212045	tier1			38	0	0.00	21	22	51.16
ENSG00000214733	0	genome.wustl.edu	37	8	144872541	144872541	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	144872541	144872541	C	T	SNP	ENSG00000214733	ENST00000527139	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.600	-	-	-	no_errors	RP11-429J17.8	Clone_based_vega_gene	ENSG00000214733	tier1	-	-	53	0	0.00	143	52	26.67
ENSG00000216102	0	genome.wustl.edu	37	19	9931204	9931204	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	9931204	9931204	A	G	SNP	ENSG00000216102	ENST00000401283	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AC008752.1	Clone_based_ensembl_gene	ENSG00000216102	tier1	-	-	33	0	0.00	43	11	19.30
ENSG00000221060	0	genome.wustl.edu	37	14	70270922	70270922	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	70270922	70270922	T	-	DEL	ENSG00000221060	ENST00000408133	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.003	-	-	-	no_errors	SNORA11	RFAM	ENSG00000221060	tier1			14	0	0.00	18	7	28.00
ENSG00000221219	0	genome.wustl.edu	37	4	54969782	54969782	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	54969782	54969782	A	G	SNP	ENSG00000221219	ENST00000408292	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AC110298.1	Clone_based_ensembl_gene	ENSG00000221219	tier1	rs56366082	-	33	0	0.00	70	11	13.58
ENSG00000221259	0	genome.wustl.edu	37	12	111511846	111511846	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	111511846	111511846	A	-	DEL	ENSG00000221259	ENST00000408332	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AC002978.1	Clone_based_ensembl_gene	ENSG00000221259	tier1			34	0	0.00	24	13	35.14
ENSG00000221358	0	genome.wustl.edu	37	15	30906094	30906094	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	30906094	30906094	C	T	SNP	ENSG00000221358	ENST00000408431	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.558	-	-	-	no_errors	AC026150.1	Clone_based_ensembl_gene	ENSG00000221358	tier1	-	-	68	0	0.00	22	106	82.81
ENSG00000221559	0	genome.wustl.edu	37	6	114026117	114026117	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	114026117	114026117	A	-	DEL	ENSG00000221559	ENST00000408632	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AL357519.1	Clone_based_ensembl_gene	ENSG00000221559	tier1			41	0	0.00	30	17	36.17
ENSG00000221717	0	genome.wustl.edu	37	10	128245580	128245581	+	RNA	DEL	AA	AA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	128245580	128245581	AA	-	DEL	ENSG00000221717	ENST00000408790	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.006:0.005	-	-	-	no_errors	AL583860.1	Clone_based_ensembl_gene	ENSG00000221717	tier1			15	0	0.00	17	4	19.05
ENSG00000222899	0	genome.wustl.edu	37	14	27396917	27396920	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	27396917	27396920	AAAA	-	DEL	ENSG00000222899	ENST00000410967	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000:0.001:0.000:0.000	-	-	-	no_errors	AL110292.1	Clone_based_ensembl_gene	ENSG00000222899	tier1			94	0	0.00	109	51	31.87
ENSG00000223180	0	genome.wustl.edu	37	15	84285004	84285006	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	84285004	84285006	TTT	-	DEL	ENSG00000223180	ENST00000411248	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.148:0.156:0.163	-	-	-	no_errors	AC087738.1	Clone_based_ensembl_gene	ENSG00000223180	tier1			22	0	0.00	24	4	14.29
ENSG00000223642	0	genome.wustl.edu	37	2	160252219	160252219	+	RNA	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	160252219	160252219	C	A	SNP	ENSG00000223642	ENST00000594921	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	AC008277.1	Clone_based_vega_gene	ENSG00000223642	tier1	-	-	26	0	0.00	38	5	11.63
ENSG00000224643	0	genome.wustl.edu	37	2	183948142	183948142	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	183948142	183948142	T	-	DEL	ENSG00000224643	ENST00000444562	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC064871.3	Clone_based_vega_gene	ENSG00000224643	tier1			14	0	0.00	10	15	60.00
ENSG00000224666	0	genome.wustl.edu	37	6	36359695	36359698	+	RNA	DEL	TTTA	TTTA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTTA	TTTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	36359695	36359698	TTTA	-	DEL	ENSG00000224666	ENST00000411643	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001:0.002:0.005	-	-	-	no_errors	RP1-50J22.4	Clone_based_vega_gene	ENSG00000224666	tier1			11	0	0.00	5	6	54.55
ENSG00000226849	0	genome.wustl.edu	37	1	11132250	11132251	+	RNA	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	11132250	11132251	-	A	INS	ENSG00000226849	ENST00000452378	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP4-635E18.7	Clone_based_vega_gene	ENSG00000226849	tier1			31	0	0.00	20	15	42.86
ENSG00000232220	0	genome.wustl.edu	37	19	54378026	54378029	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	54378026	54378029	TTTT	-	DEL	ENSG00000232220	ENST00000413496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000:0.000	-	-	-	no_errors	AC008440.5	Clone_based_vega_gene	ENSG00000232220	tier1			80	0	0.00	70	6	7.89
ENSG00000232274	0	genome.wustl.edu	37	1	143210446	143210446	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	143210446	143210446	T	0	DEL	ENSG00000232274	ENST00000412204	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-782C8.2	Clone_based_vega_gene	ENSG00000232274				45	0	0.00	60	7	10.45
ENSG00000235381	0	genome.wustl.edu	37	6	155575539	155575539	+	RNA	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	155575539	155575539	C	-	DEL	ENSG00000235381	ENST00000435295	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-477D19.2	Clone_based_vega_gene	ENSG00000235381	tier1			28	0	0.00	26	9	25.71
ENSG00000235872	0	genome.wustl.edu	37	12	68053151	68053151	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	68053151	68053151	C	T	SNP	ENSG00000235872	ENST00000425371	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-335O4.3	Clone_based_vega_gene	ENSG00000235872	tier1	rs4913352	-	44	0	0.00	27	30	52.63
ENSG00000235994	0	genome.wustl.edu	37	6	168376899	168376900	+	RNA	INS	-	-	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	168376899	168376900	-	G	INS	ENSG00000235994	ENST00000538528	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.995:0.987	-	-	-	no_errors	RP3-470B24.5	Clone_based_vega_gene	ENSG00000235994	tier1			27	0	0.00	33	14	29.79
ENSG00000236817	0	genome.wustl.edu	37	1	247729207	247729209	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	247729207	247729209	TTT	-	DEL	ENSG00000236817	ENST00000435333	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.001	-	-	-	no_errors	RP11-978I15.10	Clone_based_vega_gene	ENSG00000236817	tier1			40	0	0.00	23	5	17.86
ENSG00000237480	0	genome.wustl.edu	37	1	106623841	106623841	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	106623841	106623841	G	A	SNP	ENSG00000237480	ENST00000429608	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.980	-	-	-	no_errors	RP5-947P14.1	Clone_based_vega_gene	ENSG00000237480	tier1	-	-	63	0	0.00	64	18	21.95
ENSG00000239642	0	genome.wustl.edu	37	5	131281107	131281107	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	131281107	131281107	G	A	SNP	ENSG00000239642	ENST00000411822	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC034228.7	Clone_based_vega_gene	ENSG00000239642	tier1	-	-	27	0	0.00	16	59	78.67
ENSG00000242288	0	genome.wustl.edu	37	10	75487193	75487193	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	75487193	75487193	C	T	SNP	ENSG00000242288	ENST00000399449	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-464F9.1	Clone_based_vega_gene	ENSG00000242288	tier1	-	-	84	0	0.00	86	17	16.50
ENSG00000244306	0	genome.wustl.edu	37	14	19891212	19891213	+	RNA	DEL	TG	TG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	19891212	19891213	TG	0	DEL	ENSG00000244306	ENST00000547285	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.020:0.023	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306				44	0	0.00	78	8	9.30
ENSG00000245156	0	genome.wustl.edu	37	11	66039143	66039143	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	66039143	66039143	A	-	DEL	ENSG00000245156	ENST00000501708	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.020	-	-	-	no_errors	RP11-867G23.3	Clone_based_vega_gene	ENSG00000245156	tier1			13	0	0.00	45	29	39.19
ENSG00000248166	0	genome.wustl.edu	37	19	54848431	54848431	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	54848431	54848431	C	T	SNP	ENSG00000248166	ENST00000507363	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC008984.2	Clone_based_vega_gene	ENSG00000248166	tier1	-	-	32	0	0.00	12	39	76.47
ENSG00000248840	0	genome.wustl.edu	37	4	3314644	3314644	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	3314644	3314644	A	-	DEL	ENSG00000248840	ENST00000600073	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP11-357G3.2	Clone_based_vega_gene	ENSG00000248840	tier1			9	0	0.00	7	9	56.25
ENSG00000251273	0	genome.wustl.edu	37	5	25190618	25190618	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	25190618	25190618	C	T	SNP	ENSG00000251273	ENST00000507600	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.024	-	-	-	no_errors	RP11-549K20.1	Clone_based_vega_gene	ENSG00000251273	tier1	-	-	27	0	0.00	99	16	13.91
ENSG00000251637	0	genome.wustl.edu	37	11	67656343	67656343	+	RNA	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	67656343	67656343	C	-	DEL	ENSG00000251637	ENST00000511677	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-119D9.1	Clone_based_vega_gene	ENSG00000251637	tier1			32	0	0.00	41	57	58.16
ENSG00000254921	0	genome.wustl.edu	37	11	8060205	8060205	+	RNA	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	8060205	8060205	G	T	SNP	ENSG00000254921	ENST00000528151	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.103	-	-	-	no_errors	RP11-236J17.6	Clone_based_vega_gene	ENSG00000254921	tier1	-	-	18	0	0.00	5	8	61.54
ENSG00000255182	0	genome.wustl.edu	37	8	145724495	145724495	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	145724495	145724495	C	T	SNP	ENSG00000255182	ENST00000527086	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2517M22.14	Clone_based_vega_gene	ENSG00000255182	tier1	-	-	16	0	0.00	20	15	42.86
ENSG00000255835	0	genome.wustl.edu	37	1	226075158	226075158	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	226075158	226075158	C	T	SNP	ENSG00000255835	ENST00000432920	human	ensembl	74_37	-1	putative	missense	c.1003	p.A335T	0.000	NULL	superfamily_6-PGluconate_DH_C-like	-	no_errors	RP4-559A3.7	Clone_based_vega_gene	ENSG00000255835	tier1	-	-	24	0	0.00	20	7	25.93
ENSG00000256341	0	genome.wustl.edu	37	11	63886077	63886079	+	RNA	DEL	TTC	TTC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTC	TTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	63886077	63886079	TTC	-	DEL	ENSG00000256341	ENST00000543817	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.030:0.040:0.008	-	-	-	no_errors	RP11-21A7A.3	Clone_based_vega_gene	ENSG00000256341	tier1			51	0	0.00	72	12	14.29
ENSG00000256341	0	genome.wustl.edu	37	11	63886078	63886079	+	RNA	DEL	TC	TC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	63886078	63886079	TC	-	DEL	ENSG00000256341	ENST00000543817	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.040:0.008	-	-	-	no_errors	RP11-21A7A.3	Clone_based_vega_gene	ENSG00000256341	tier1			50	0	0.00	61	11	15.28
ENSG00000256518	0	genome.wustl.edu	37	11	71870646	71870646	+	RNA	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	71870646	71870646	T	C	SNP	ENSG00000256518	ENST00000542477	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-807H22.5	Clone_based_vega_gene	ENSG00000256518	tier1	-	-	27	0	0.00	29	20	40.82
ENSG00000257434	0	genome.wustl.edu	37	12	75435987	75435988	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	75435987	75435988	TT	-	DEL	ENSG00000257434	ENST00000547040	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005:0.007	-	-	-	no_errors	RP11-81K13.1	Clone_based_vega_gene	ENSG00000257434	tier1			17	0	0.00	18	11	37.93
ENSG00000258727	0	genome.wustl.edu	37	14	24037246	24037246	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	24037246	24037246	C	T	SNP	ENSG00000258727	ENST00000555968	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.971	-	-	-	no_errors	RP11-66N24.3	Clone_based_vega_gene	ENSG00000258727	tier1	-	-	34	0	0.00	89	5	5.32
ENSG00000260108	0	genome.wustl.edu	37	16	69499982	69499982	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	69499982	69499982	T	-	DEL	ENSG00000260108	ENST00000567834	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.053	-	-	-	no_errors	RP11-140H17.1	Clone_based_vega_gene	ENSG00000260108	tier1			86	0	0.00	140	19	11.95
ENSG00000261093	0	genome.wustl.edu	37	16	2647921	2647922	+	RNA	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	2647921	2647922	-	A	INS	ENSG00000261093	ENST00000562166	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.705:0.576	-	-	-	no_errors	CTD-3126B10.1	Clone_based_vega_gene	ENSG00000261093	tier1			19	0	0.00	18	12	40.00
ENSG00000262160	0	genome.wustl.edu	37	16	68262364	68262364	+	RNA	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	68262364	68262364	T	C	SNP	ENSG00000262160	ENST00000571197	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-96D1.11	Clone_based_vega_gene	ENSG00000262160	tier1	-	-	11	0	0.00	23	18	43.90
ENSG00000263875	0	genome.wustl.edu	37	9	96327977	96327978	+	RNA	DEL	AA	AA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	96327977	96327978	AA	-	DEL	ENSG00000263875	ENST00000582353	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.979:1.000	-	-	-	no_errors	AL353629.1	Clone_based_ensembl_gene	ENSG00000263875	tier1			27	0	0.00	17	12	41.38
ENSG00000263887	0	genome.wustl.edu	37	17	60364132	60364132	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	60364132	60364132	G	A	SNP	ENSG00000263887	ENST00000602493	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-51L5.5	Clone_based_vega_gene	ENSG00000263887	tier1	-	-	79	0	0.00	72	21	22.58
ENSG00000266002	0	genome.wustl.edu	37	17	57477848	57477849	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	57477848	57477849	TT	-	DEL	ENSG00000266002	ENST00000585190	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.648:0.971	-	-	-	no_errors	RP11-567L7.5	Clone_based_vega_gene	ENSG00000266002	tier1			29	0	0.00	17	9	34.62
ENSG00000266156	0	genome.wustl.edu	37	19	20988370	20988370	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	20988370	20988370	T	-	DEL	ENSG00000266156	ENST00000582722	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	AC010329.1	Clone_based_ensembl_gene	ENSG00000266156	tier1			12	0	0.00	3	9	75.00
ENSG00000267427	0	genome.wustl.edu	37	19	6210417	6210418	+	RNA	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	6210417	6210418	-	T	INS	ENSG00000267427	ENST00000586154	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998:0.999	-	-	-	no_errors	CTC-503J8.6	Clone_based_vega_gene	ENSG00000267427	tier1			18	0	0.00	28	7	20.00
ENSG00000267896	0	genome.wustl.edu	37	19	50363638	50363639	+	RNA	INS	-	-	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	50363638	50363639	-	G	INS	ENSG00000267896	ENST00000596624	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC018766.4	Clone_based_vega_gene	ENSG00000267896	tier1			20	0	0.00	17	7	29.17
ENSG00000269243	0	genome.wustl.edu	37	19	16244264	16244264	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	16244264	16244264	T	-	DEL	ENSG00000269243	ENST00000599676	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2231E14.8	Clone_based_vega_gene	ENSG00000269243	tier1			9	0	0.00	15	9	37.50
ENSG00000269318	0	genome.wustl.edu	37	19	4357145	4357145	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	4357145	4357145	C	T	SNP	ENSG00000269318	ENST00000593524	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	AC007292.3	Clone_based_vega_gene	ENSG00000269318	tier1	-	-	31	0	0.00	7	33	82.50
ENSG00000269604	0	genome.wustl.edu	37	19	4794097	4794097	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	4794097	4794097	C	T	SNP	ENSG00000269604	ENST00000601192	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC005523.2	Clone_based_vega_gene	ENSG00000269604	tier1	-	-	52	0	0.00	36	40	52.63
ENSG00000270433	0	genome.wustl.edu	37	14	23764733	23764733	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	23764733	23764733	A	-	DEL	ENSG00000270433	ENST00000604456	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.835	-	-	-	no_errors	RP11-124D2.7	Clone_based_vega_gene	ENSG00000270433	tier1			16	0	0.00	23	12	34.29
ENSG00000272647	0	genome.wustl.edu	37	7	99197892	99197892	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	99197892	99197892	T	C	SNP	ENSG00000272647	ENST00000455905	human	ensembl	74_37	+1	known	silent	c.198	p.I66	0.000	NULL	NULL	-	no_errors	GS1-259H13.10	Clone_based_vega_gene	ENSG00000272647	tier1	-	-	75	0	0.00	99	29	22.66
ENSG00000272655	0	genome.wustl.edu	37	7	44053949	44053949	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	44053949	44053949	G	A	SNP	ENSG00000272655	ENST00000326391	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	POLR2J4	Clone_based_vega_gene	ENSG00000272655	tier1	-	-	26	0	0.00	44	23	34.33
ENSG00000273455	0	genome.wustl.edu	37	3	135806703	135806703	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	135806703	135806703	T	-	DEL	ENSG00000273455	ENST00000608883	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP11-305O4.3	Clone_based_vega_gene	ENSG00000273455	tier1			42	0	0.00	38	24	38.71
ENTPD1-AS1	0	genome.wustl.edu	37	10	97779109	97779109	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	97779109	97779109	A	-	DEL	ENTPD1-AS1	ENST00000458228	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ENTPD1-AS1	HGNC	ENSG00000226688	tier1			36	0	0.00	24	9	27.27
EPG5	0	genome.wustl.edu	37	18	43459143	43459143	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	43459143	43459143	A	-	DEL	EPG5	ENST00000282041	human	ensembl	74_37	-1	known	frame_shift_del	c.5704	p.Y1902fs	1.000	NULL	NULL	-	no_errors	EPG5	HGNC	ENSG00000152223	tier1			28	0	0.00	24	5	17.24
EPHA8	0	genome.wustl.edu	37	1	22903132	22903133	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	22903132	22903133	-	CT	INS	EPHA8	ENST00000166244	human	ensembl	74_37	+1	known	frame_shift_ins	c.582_583	p.R197fs	1.000:1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA8	HGNC	ENSG00000070886	tier1			49	0	0.00	51	13	20.31
EPPK1	0	genome.wustl.edu	37	8	144947011	144947011	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	144947011	144947011	G	A	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	silent	c.411	p.I137	0.316	smart_Plectin_repeat	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184	tier1	-	-	34	0	0.00	118	48	28.57
EPPK1	0	genome.wustl.edu	37	8	144942928	144942928	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	144942928	144942928	C	T	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	silent	c.4494	p.L1498	0.942	NULL	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184				12	0	0.00	36	3	7.69
EPS15	0	genome.wustl.edu	37	1	51887719	51887719	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	51887719	51887719	A	-	DEL	EPS15	ENST00000493793	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.380	-	-	-	no_errors	EPS15	HGNC	ENSG00000085832	tier1			9	0	0.00	5	3	37.50
ERBB4	0	genome.wustl.edu	37	2	212248355	212248355	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	212248355	212248355	C	-	DEL	ERBB4	ENST00000342788	human	ensembl	74_37	-1	known	frame_shift_del	c.3912	p.N1305fs	0.999	NULL	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB4	HGNC	ENSG00000178568	tier1			32	0	0.00	34	8	19.05
ERCC6	0	genome.wustl.edu	37	10	50740752	50740752	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	50740752	50740752	C	T	SNP	ERCC6	ENST00000355832	human	ensembl	74_37	-1	known	missense	c.259	p.A87T	0.913	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6	HGNC	ENSG00000225830	tier1	-	-	54	0	0.00	51	33	39.29
ERN2	0	genome.wustl.edu	37	16	23718096	23718096	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	23718096	23718096	G	-	DEL	ERN2	ENST00000256797	human	ensembl	74_37	-1	known	frame_shift_del	c.610	p.R204fs	0.894	superfamily_Quinonprotein_ADH-like_supfam,smart_PQQ_beta_propeller_repeat	pfam_KEN_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like_supfam,smart_PQQ_beta_propeller_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PUG-dom,pfscan_Prot_kinase_dom	-	no_errors	ERN2	HGNC	ENSG00000134398	tier1			24	0	0.00	53	14	20.90
ERO1LB	0	genome.wustl.edu	37	1	236399648	236399648	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	236399648	236399648	G	A	SNP	ERO1LB	ENST00000354619	human	ensembl	74_37	-1	known	missense	c.556	p.R186C	1.000	pfam_Ero1,pirsf_Ero1	pfam_Ero1,pirsf_Ero1	-	no_errors	ERO1LB	HGNC	ENSG00000086619	tier1	-	-	39	0	0.00	64	7	9.86
ESCO1	0	genome.wustl.edu	37	18	19153489	19153489	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	19153489	19153489	A	-	DEL	ESCO1	ENST00000269214	human	ensembl	74_37	-1	known	frame_shift_del	c.1316	p.L439fs	0.592	NULL	NULL	-	no_errors	ESCO1	HGNC	ENSG00000141446	tier1			28	0	0.00	41	8	16.33
ESRP2	0	genome.wustl.edu	37	16	68264764	68264764	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	68264764	68264764	G	T	SNP	ESRP2	ENST00000565858	human	ensembl	74_37	-1	known	missense	c.1908	p.N636K	1.000	NULL	superfamily_RNaseH-like_dom,smart_RRM_dom	-	no_errors	ESRP2	HGNC	ENSG00000103067	tier1	-	-	91	0	0.00	167	13	7.22
ETNK2	0	genome.wustl.edu	37	1	204110634	204110634	+	RNA	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	204110634	204110634	G	-	DEL	ETNK2	ENST00000477125	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ETNK2	HGNC	ENSG00000143845	tier1			11	0	0.00	11	4	26.67
EWSR1	0	genome.wustl.edu	37	22	29693886	29693886	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	29693886	29693886	G	-	DEL	EWSR1	ENST00000414183	human	ensembl	74_37	+1	known	frame_shift_del	c.1379	p.G461fs	0.999	NULL	pfam_Znf_RanBP2,pfam_RRM_dom,smart_RRM_dom,smart_Znf_RanBP2,pfscan_Znf_RanBP2,pfscan_RRM_dom	-	no_errors	EWSR1	HGNC	ENSG00000182944	tier1			26	0	0.00	41	9	18.00
EXOC6B	0	genome.wustl.edu	37	2	72406346	72406346	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	72406346	72406346	A	-	DEL	EXOC6B	ENST00000471335	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	EXOC6B	HGNC	ENSG00000144036	tier1			9	0	0.00	13	6	31.58
EXOSC8	0	genome.wustl.edu	37	13	37580070	37580070	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	37580070	37580070	T	A	SNP	EXOSC8	ENST00000389704	human	ensembl	74_37	+1	known	missense	c.252	p.D84E	1.000	pfam_ExoRNase_PH_dom1,superfamily_Ribosomal_S5_D2-typ_fold	pfam_ExoRNase_PH_dom1,pfam_ExoRNase_PH_dom2,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_ExoRNase_PH_dom2	-	no_errors	EXOSC8	HGNC	ENSG00000120699	tier1	-	-	47	0	0.00	33	25	43.10
EYA1	0	genome.wustl.edu	37	8	72128937	72128938	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	72128937	72128938	0	T	INS	EYA1	ENST00000340726	human	ensembl	74_37	-1	known	frame_shift_ins	c.1350_1349	p.N450fs	0.960:1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA1	HGNC	ENSG00000104313				102	0	0.00	201	19	8.64
FAAH2	0	genome.wustl.edu	37	X	57318978	57318978	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	57318978	57318978	C	T	SNP	FAAH2	ENST00000374900	human	ensembl	74_37	+1	known	silent	c.240	p.D80	0.972	pfam_Amidase,superfamily_Amidase_dom	pfam_Amidase,superfamily_Amidase_dom	-	no_errors	FAAH2	HGNC	ENSG00000165591	tier1	-	-	14	0	0.00	5	17	77.27
FABP5P3	0	genome.wustl.edu	37	7	152139920	152139920	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	152139920	152139920	A	G	SNP	FABP5P3	ENST00000477993	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.995	-	-	-	no_errors	FABP5P3	HGNC	ENSG00000241735	tier1	-	-	23	0	0.00	25	21	45.65
FAF1	0	genome.wustl.edu	37	1	51210386	51210386	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	51210386	51210386	T	-	DEL	FAF1	ENST00000371778	human	ensembl	74_37	-1	known	frame_shift_del	c.429	p.G144fs	1.000	NULL	pfam_UBX,superfamily_UBA-like,smart_UAS,smart_UBX,pfscan_UBX	-	no_errors	FAF1	HGNC	ENSG00000185104	tier1			57	0	0.00	32	20	38.46
FAM118A	0	genome.wustl.edu	37	22	45736690	45736691	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	45736690	45736691	TT	-	DEL	FAM118A	ENST00000479180	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010:0.014	-	-	-	no_errors	FAM118A	HGNC	ENSG00000100376	tier1			12	0	0.00	13	7	35.00
FAM153B	0	genome.wustl.edu	37	5	175516516	175516516	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	175516516	175516516	G	A	SNP	FAM153B	ENST00000253490	human	ensembl	74_37	+1	known	missense	c.226	p.V76I	0.000	NULL	prints_FAM153	-	no_errors	FAM153B	HGNC	ENSG00000182230	tier1	-	-	13	0	0.00	6	11	64.71
FAM166B	0	genome.wustl.edu	37	9	35562401	35562401	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	35562401	35562401	G	T	SNP	FAM166B	ENST00000447837	human	ensembl	74_37	-1	known	missense	c.647	p.T216N	0.976	NULL	pfam_UPF0573/UPF0605	-	no_errors	FAM166B	HGNC	ENSG00000215187				61	0	0.00	142	13	8.39
FAM178B	0	genome.wustl.edu	37	2	97674870	97674870	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	97674870	97674870	T	C	SNP	FAM178B	ENST00000417561	human	ensembl	74_37	-1	known	missense	c.136	p.K46E	0.003	NULL	NULL	-	no_errors	FAM178B	HGNC	ENSG00000168754	tier1	rs2698405	-	174	0	0.00	320	52	13.98
FAM178B	0	genome.wustl.edu	37	2	97674903	97674903	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	97674903	97674903	C	G	SNP	FAM178B	ENST00000417561	human	ensembl	74_37	-1	known	missense	c.103	p.D35H	0.003	NULL	NULL	-	no_errors	FAM178B	HGNC	ENSG00000168754	tier1	rs2551258	-	164	0	0.00	294	70	19.23
FAM198A	0	genome.wustl.edu	37	3	43074481	43074481	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	43074481	43074481	T	C	SNP	FAM198A	ENST00000273146	human	ensembl	74_37	+1	known	silent	c.726	p.C242	0.085	NULL	NULL	-	no_errors	FAM198A	HGNC	ENSG00000144649	tier1	-	-	22	0	0.00	16	27	62.79
FAM206A	0	genome.wustl.edu	37	9	111698645	111698645	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	111698645	111698645	T	C	SNP	FAM206A	ENST00000322940	human	ensembl	74_37	+1	known	silent	c.189	p.I63	1.000	superfamily_Single_hybrid_motif	pfam_GCV_H,superfamily_Single_hybrid_motif	-	no_errors	FAM206A	HGNC	ENSG00000119328	tier1	-	-	28	0	0.00	28	9	24.32
FAM20B	0	genome.wustl.edu	37	1	179041052	179041052	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	179041052	179041052	C	T	SNP	FAM20B	ENST00000263733	human	ensembl	74_37	+1	known	missense	c.1003	p.R335W	1.000	pfam_DUF1193	pfam_DUF1193	-	no_errors	FAM20B	HGNC	ENSG00000116199	tier1	-	-	29	0	0.00	22	14	37.84
FAM211B	0	genome.wustl.edu	37	22	24984229	24984229	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	24984229	24984229	C	T	SNP	FAM211B	ENST00000318753	human	ensembl	74_37	-1	known	silent	c.375	p.S125	1.000	NULL	NULL	-	no_errors	FAM211B	HGNC	ENSG00000178026	tier1	-	-	62	0	0.00	70	54	43.55
FAM218A	0	genome.wustl.edu	37	4	165878447	165878447	+	Silent	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	165878447	165878447	C	A	SNP	FAM218A	ENST00000513876	human	ensembl	74_37	+1	known	silent	c.273	p.R91	0.000	NULL	NULL	-	no_errors	FAM218A	HGNC	ENSG00000250486	tier1	-	-	25	0	0.00	17	18	51.43
FAM26F	0	genome.wustl.edu	37	6	116783245	116783245	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	116783245	116783245	C	T	SNP	FAM26F	ENST00000368605	human	ensembl	74_37	+1	known	silent	c.153	p.Y51	0.807	NULL	NULL	-	no_errors	FAM26F	HGNC	ENSG00000188820	tier1	-	-	20	0	0.00	15	6	28.57
FAM71E2	0	genome.wustl.edu	37	19	55874319	55874319	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	55874319	55874319	C	T	SNP	FAM71E2	ENST00000424985	human	ensembl	74_37	-1	novel	missense	c.116	p.R39H	0.996	NULL	pfam_DUF3699	-	no_errors	FAM71E2	HGNC	ENSG00000180043	tier1	-	-	48	0	0.00	28	20	41.67
FAM84B	0	genome.wustl.edu	37	8	127569172	127569172	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	127569172	127569172	G	T	SNP	FAM84B	ENST00000304916	human	ensembl	74_37	-1	known	missense	c.463	p.L155M	1.000	pfam_LRAT-like_dom	pfam_LRAT-like_dom	-	no_errors	FAM84B	HGNC	ENSG00000168672				15	0	0.00	102	15	12.82
FAM86B3P	0	genome.wustl.edu	37	8	8095879	8095879	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	8095879	8095879	C	T	SNP	FAM86B3P	ENST00000590591	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM86B3P	HGNC	ENSG00000173295				70	0	0.00	92	5	5.15
FAM86JP	0	genome.wustl.edu	37	3	125647977	125647977	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	125647977	125647977	G	A	SNP	FAM86JP	ENST00000467239	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM86JP	HGNC	ENSG00000171084	tier1	-	-	20	0	0.00	13	12	48.00
FAP	0	genome.wustl.edu	37	2	163055317	163055317	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	163055317	163055317	T	C	SNP	FAP	ENST00000188790	human	ensembl	74_37	-1	known	missense	c.1352	p.Y451C	1.000	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	FAP	HGNC	ENSG00000078098	tier1	-	-	61	0	0.00	54	23	29.87
FASN	0	genome.wustl.edu	37	17	80046083	80046083	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	80046083	80046083	C	T	SNP	FASN	ENST00000306749	human	ensembl	74_37	-1	known	silent	c.2694	p.T898	0.018	smart_PKS_dehydratase	pfam_Acyl_transferase,pfam_Ketoacyl_synth_N,pfam_Thioesterase,pfam_PKS_KR,pfam_DH_sc/Rdtase_SDR,pfam_Ketoacyl_synth_C,pfam_ADH_C,pfam_Acyl_carrier_prot-like,pfam_Methyltransf_12,pfam_Methyltransf_11,superfamily_Thiolase-like,superfamily_Acyl_Trfase/lysoPLipase,superfamily_GroES-like,superfamily_Acyl_carrier_prot-like,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_Beta-ketoAc_synthase_dom,smart_PKS_acyl_transferase,smart_PKS_dehydratase,smart_PKS_ER,smart_PKS/FAS_KR,smart_PKS_PP-bd,pfscan_Acyl_carrier_prot-like	-	no_errors	FASN	HGNC	ENSG00000169710	tier1	-	-	39	0	0.00	56	16	22.22
FAT2	0	genome.wustl.edu	37	5	150922881	150922882	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	150922881	150922882	GA	-	DEL	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	frame_shift_del	c.7807_7806	p.P2603fs	1.000:1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	tier1			111	0	0.00	48	71	59.66
FBLN2	0	genome.wustl.edu	37	3	13679189	13679189	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	13679189	13679189	G	A	SNP	FBLN2	ENST00000404922	human	ensembl	74_37	+1	known	missense	c.3466	p.A1156T	0.984	NULL	pfam_EGF-like_Ca-bd_dom,pfam_Anaphylatoxin/fibulin,superfamily_Anaphylatoxin_comp_syst,smart_EG-like_dom,smart_Anaphylatoxin/fibulin,smart_EGF-like_Ca-bd_dom,pfscan_Anaphylatoxin/fibulin,pfscan_EG-like_dom	-	no_errors	FBLN2	HGNC	ENSG00000163520	tier1	-	-	18	0	0.00	9	24	72.73
FBRS	0	genome.wustl.edu	37	16	30680549	30680549	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	30680549	30680549	C	T	SNP	FBRS	ENST00000356166	human	ensembl	74_37	+1	known	silent	c.2526	p.A842	0.000	NULL	prints_AUTS2	-	no_errors	FBRS	HGNC	ENSG00000156860	tier1	-	-	8	0	0.00	6	8	57.14
FBXL7	0	genome.wustl.edu	37	5	15928463	15928463	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	15928463	15928463	C	T	SNP	FBXL7	ENST00000504595	human	ensembl	74_37	+1	known	missense	c.592	p.R198W	1.000	smart_Leu-rich_rpt_Cys-con_subtyp	pfam_Leu-rich_rpt,pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom	-	no_errors	FBXL7	HGNC	ENSG00000183580	tier1	-	-	50	0	0.00	132	19	12.58
FBXO10	0	genome.wustl.edu	37	9	37537267	37537267	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	37537267	37537267	G	A	SNP	FBXO10	ENST00000432825	human	ensembl	74_37	-1	known	missense	c.1259	p.A420V	1.000	smart_Carb-bd_sugar_hydrolysis-dom	pfam_F-box_dom,superfamily_Pectin_lyase_fold/virulence,superfamily_F-box_dom,smart_F-box_dom,smart_PbH1,smart_Carb-bd_sugar_hydrolysis-dom,pfscan_F-box_dom,tigrfam_Para_beta_helix_rpt-2	-	no_errors	FBXO10	HGNC	ENSG00000147912	tier1	-	-	8	0	0.00	29	20	40.82
FBXO15	0	genome.wustl.edu	37	18	71749238	71749238	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	71749238	71749238	T	-	DEL	FBXO15	ENST00000419743	human	ensembl	74_37	-1	known	frame_shift_del	c.1187	p.N396fs	0.379	NULL	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO15	HGNC	ENSG00000141665	tier1			48	0	0.00	24	25	51.02
FBXO47	0	genome.wustl.edu	37	17	37093481	37093483	+	In_Frame_Del	DEL	TAG	TAG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TAG	TAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	37093481	37093483	TAG	-	DEL	FBXO47	ENST00000378079	human	ensembl	74_37	-1	known	in_frame_del	c.1306_1304	p.AN435in_frame_delD	1.000:0.998:1.000	NULL	pfam_F-box_dom,superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO47	HGNC	ENSG00000204952	tier1			22	0	0.00	29	13	30.95
FBXW4	0	genome.wustl.edu	37	10	103386257	103386257	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	103386257	103386257	T	-	DEL	FBXW4	ENST00000470093	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	FBXW4	HGNC	ENSG00000107829	tier1			11	0	0.00	9	9	50.00
FCGBP	0	genome.wustl.edu	37	19	40392611	40392611	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	40392611	40392611	C	T	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	silent	c.7893	p.P2631	0.004	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920	tier1	-	-	98	0	0.00	68	28	29.17
FERMT2	0	genome.wustl.edu	37	14	53327604	53327604	+	RNA	SNP	T	T	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	53327604	53327604	T	G	SNP	FERMT2	ENST00000557255	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.519	-	-	-	no_errors	FERMT2	HGNC	ENSG00000073712	tier1	-	-	15	0	0.00	34	7	17.07
FETUB	0	genome.wustl.edu	37	3	186362544	186362544	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	186362544	186362544	A	0	DEL	FETUB	ENST00000265029	human	ensembl	74_37	+1	known	frame_shift_del	c.429	p.K146fs	0.854	NULL	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	FETUB	HGNC	ENSG00000090512				17	0	0.00	48	9	15.79
FEZ1	0	genome.wustl.edu	37	11	125330507	125330509	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	125330507	125330509	TCT	-	DEL	FEZ1	ENST00000278919	human	ensembl	74_37	-1	known	in_frame_del	c.554_552	p.E186in_frame_del	1.000:1.000:0.991	pfam_FEZ	pfam_FEZ	-	no_errors	FEZ1	HGNC	ENSG00000149557	tier1			50	0	0.00	23	26	53.06
FGF23	0	genome.wustl.edu	37	12	4479741	4479741	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	4479741	4479741	C	T	SNP	FGF23	ENST00000237837	human	ensembl	74_37	-1	known	missense	c.524	p.R175Q	0.898	NULL	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF23	HGNC	ENSG00000118972	tier1	rs28937881	-	20	0	0.00	46	25	35.21
FLJ33360	0	genome.wustl.edu	37	5	6312341	6312341	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	6312341	6312341	T	0	DEL	FLJ33360	ENST00000507444	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2324F15.2	Clone_based_vega_gene	ENSG00000250490				35	0	0.00	106	9	7.83
FLNC	0	genome.wustl.edu	37	7	128498203	128498203	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	128498203	128498203	G	A	SNP	FLNC	ENST00000325888	human	ensembl	74_37	+1	known	missense	c.7922	p.R2641Q	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591	tier1	-	-	51	0	0.00	76	43	35.83
FLOT2	0	genome.wustl.edu	37	17	27211323	27211323	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	27211323	27211323	C	A	SNP	FLOT2	ENST00000394908	human	ensembl	74_37	-1	known	nonsense	c.142	p.E48*	1.000	pfam_Band_7	pfam_Band_7,smart_Band_7	-	no_errors	FLOT2	HGNC	ENSG00000132589				14	0	0.00	35	3	7.89
FLRT2	0	genome.wustl.edu	37	14	86092478	86092478	+	RNA	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	86092478	86092478	C	A	SNP	FLRT2	ENST00000553650	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	FLRT2	HGNC	ENSG00000185070	tier1	-	-	32	0	0.00	45	9	16.36
FLT3	0	genome.wustl.edu	37	13	28636205	28636205	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	28636205	28636205	A	G	SNP	FLT3	ENST00000380982	human	ensembl	74_37	-1	known	missense	c.167	p.V56A	0.014	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FLT3	HGNC	ENSG00000122025				13	0	0.00	13	3	18.75
FLYWCH2	0	genome.wustl.edu	37	16	2949270	2949270	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	2949270	2949270	T	-	DEL	FLYWCH2	ENST00000572786	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	FLYWCH2	HGNC	ENSG00000162076	tier1			16	0	0.00	24	4	14.29
FMOD	0	genome.wustl.edu	37	1	203316470	203316470	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	203316470	203316470	G	-	DEL	FMOD	ENST00000354955	human	ensembl	74_37	-1	known	frame_shift_del	c.929	p.P310fs	0.400	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	FMOD	HGNC	ENSG00000122176	tier1			30	0	0.00	24	7	22.58
FNDC3B	0	genome.wustl.edu	37	3	172096210	172096210	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	172096210	172096210	C	-	DEL	FNDC3B	ENST00000336824	human	ensembl	74_37	+1	known	frame_shift_del	c.3159	p.T1056fs	0.958	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC3B	HGNC	ENSG00000075420	tier1			44	0	0.00	59	26	30.59
FNDC3B	0	genome.wustl.edu	37	3	172098807	172098807	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	172098807	172098807	C	T	SNP	FNDC3B	ENST00000336824	human	ensembl	74_37	+1	known	missense	c.3227	p.T1076M	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC3B	HGNC	ENSG00000075420	tier1	-	-	36	0	0.00	89	9	9.18
FNDC8	0	genome.wustl.edu	37	17	33457310	33457310	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	33457310	33457310	C	A	SNP	FNDC8	ENST00000158009	human	ensembl	74_37	+1	known	missense	c.832	p.L278M	0.994	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC8	HGNC	ENSG00000073598	tier1	-	-	40	0	0.00	26	5	16.13
FOLR1	0	genome.wustl.edu	37	11	71906681	71906681	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	71906681	71906681	G	T	SNP	FOLR1	ENST00000312293	human	ensembl	74_37	+1	known	missense	c.383	p.R128L	1.000	pfam_Folate_rcpt-like	pfam_Folate_rcpt-like	-	no_errors	FOLR1	HGNC	ENSG00000110195	tier1	-	-	80	0	0.00	69	52	42.98
FOXB2	0	genome.wustl.edu	37	9	79634851	79634851	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	79634851	79634851	G	T	SNP	FOXB2	ENST00000376708	human	ensembl	74_37	+1	known	missense	c.281	p.G94V	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head,prints_Antifreeze_1	-	no_errors	FOXB2	HGNC	ENSG00000204612	tier1	-	-	20	0	0.00	14	25	64.10
FOXM1	0	genome.wustl.edu	37	12	2968282	2968282	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	2968282	2968282	G	A	SNP	FOXM1	ENST00000342628	human	ensembl	74_37	-1	known	missense	c.1928	p.T643M	0.002	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXM1	HGNC	ENSG00000111206	tier1	rs199632659	-	32	0	0.00	28	19	40.43
FOXP3	0	genome.wustl.edu	37	X	49108166	49108166	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	49108166	49108166	G	A	SNP	FOXP3	ENST00000376207	human	ensembl	74_37	-1	known	missense	c.1105	p.R369C	0.890	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXP3	HGNC	ENSG00000049768	tier1	-	-	22	0	0.00	7	27	79.41
FPGS	0	genome.wustl.edu	37	9	130567066	130567067	+	RNA	INS	-	-	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	130567066	130567067	-	C	INS	FPGS	ENST00000469310	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.002	-	-	-	no_errors	FPGS	HGNC	ENSG00000136877	tier1			15	0	0.00	15	3	16.67
FPGT-TNNI3K	0	genome.wustl.edu	37	1	74930383	74930383	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	74930383	74930383	A	G	SNP	FPGT-TNNI3K	ENST00000370899	human	ensembl	74_37	+1	novel	missense	c.2489	p.N830S	0.084	NULL	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	FPGT-TNNI3K	HGNC	ENSG00000259030	tier1	-	-	110	0	0.00	72	69	48.94
FRMD4A	0	genome.wustl.edu	37	10	13735686	13735688	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	13735686	13735688	TTT	-	DEL	FRMD4A	ENST00000492155	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.024:0.026:0.028	-	-	-	no_errors	FRMD4A	HGNC	ENSG00000151474	tier1			35	0	0.00	23	9	28.12
FRY	0	genome.wustl.edu	37	13	32709319	32709319	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	32709319	32709319	T	C	SNP	FRY	ENST00000380250	human	ensembl	74_37	+1	known	missense	c.1076	p.L359S	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FRY	HGNC	ENSG00000073910	tier1	-	-	37	0	0.00	16	18	52.94
FSIP2	0	genome.wustl.edu	37	2	186671157	186671157	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	186671157	186671157	C	-	DEL	FSIP2	ENST00000343098	human	ensembl	74_37	+1	known	frame_shift_del	c.17391	p.P5799fs	0.000	NULL	NULL	-	no_errors	FSIP2	HGNC	ENSG00000188738	tier1			43	0	0.00	30	21	41.18
FZD6	0	genome.wustl.edu	37	8	104343649	104343649	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	104343649	104343649	G	A	SNP	FZD6	ENST00000358755	human	ensembl	74_37	+1	known	missense	c.2033	p.S678N	0.047	NULL	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD6	HGNC	ENSG00000164930	tier1	-	-	65	0	0.00	134	15	10.07
G2E3	0	genome.wustl.edu	37	14	31074772	31074772	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	31074772	31074772	A	-	DEL	G2E3	ENST00000206595	human	ensembl	74_37	+1	known	frame_shift_del	c.1072	p.T361fs	0.994	superfamily_HECT	pfam_HECT,superfamily_HECT,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_HECT,pfscan_HECT	-	no_errors	G2E3	HGNC	ENSG00000092140	tier1			19	0	0.00	22	12	35.29
G2E3	0	genome.wustl.edu	37	14	31074770	31074770	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	31074770	31074770	T	A	SNP	G2E3	ENST00000206595	human	ensembl	74_37	+1	known	missense	c.1070	p.I357N	1.000	superfamily_HECT	pfam_HECT,superfamily_HECT,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_HECT,pfscan_HECT	-	no_errors	G2E3	HGNC	ENSG00000092140				17	0	0.00	30	4	11.76
G2E3	0	genome.wustl.edu	37	14	31074772	31074772	+	Nonsense_Mutation	SNP	A	A	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	31074772	31074772	A	T	SNP	G2E3	ENST00000206595	human	ensembl	74_37	+1	known	nonsense	c.1072	p.K358*	0.994	superfamily_HECT	pfam_HECT,superfamily_HECT,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_HECT,pfscan_HECT	-	no_errors	G2E3	HGNC	ENSG00000092140				19	0	0.00	18	4	11.76
G6PC2	0	genome.wustl.edu	37	2	169764753	169764753	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	169764753	169764753	T	-	DEL	G6PC2	ENST00000461586	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	G6PC2	HGNC	ENSG00000152254	tier1			11	0	0.00	10	4	28.57
GAA	0	genome.wustl.edu	37	17	78085835	78085835	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	78085835	78085835	T	C	SNP	GAA	ENST00000302262	human	ensembl	74_37	+1	known	missense	c.1690	p.F564L	1.000	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	GAA	HGNC	ENSG00000171298	tier1	-	-	26	0	0.00	37	15	28.85
GADD45GIP1	0	genome.wustl.edu	37	19	13065136	13065138	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	13065136	13065138	CTT	-	DEL	GADD45GIP1	ENST00000316939	human	ensembl	74_37	-1	known	in_frame_del	c.555_553	p.K185in_frame_del	1.000:1.000:1.000	pfam_Damage-induce-interacting_prot	pfam_Damage-induce-interacting_prot	-	no_errors	GADD45GIP1	HGNC	ENSG00000179271	tier1			55	0	0.00	78	39	33.33
GALNTL6	0	genome.wustl.edu	37	4	173150833	173150833	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	173150833	173150833	G	A	SNP	GALNTL6	ENST00000506823	human	ensembl	74_37	+1	known	silent	c.165	p.G55	1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNTL6	HGNC	ENSG00000174473	tier1	-	-	69	0	0.00	52	29	35.80
GAN	0	genome.wustl.edu	37	16	81410849	81410849	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	81410849	81410849	T	C	SNP	GAN	ENST00000568107	human	ensembl	74_37	+1	known	silent	c.1528	p.L510	0.233	pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	GAN	HGNC	ENSG00000261609	tier1	-	-	124	0	0.00	129	88	40.55
GCSHP3	0	genome.wustl.edu	37	2	206980715	206980715	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	206980715	206980715	T	-	DEL	GCSHP3	ENST00000453039	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.033	-	-	-	no_errors	AC007383.4	Clone_based_vega_gene	ENSG00000231955	tier1			54	0	0.00	66	11	14.29
GGA3	0	genome.wustl.edu	37	17	73234468	73234470	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	73234468	73234470	CTC	-	DEL	GGA3	ENST00000245541	human	ensembl	74_37	-1	known	in_frame_del	c.2064_2062	p.E688in_frame_del	1.000:1.000:1.000	pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pfscan_Clathrin_g-adaptin_app	pfam_VHS,pfam_GAT,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_Coatomer/clathrin_app_Ig-like,superfamily_ENTH_VHS,smart_VHS_subgr,smart_Clathrin_a/b/g-adaptin_app_Ig,pfscan_Clathrin_g-adaptin_app,pfscan_GAT,pfscan_VHS	-	no_errors	GGA3	HGNC	ENSG00000125447	tier1			25	0	0.00	25	18	41.86
GGT7	0	genome.wustl.edu	37	20	33451230	33451230	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	33451230	33451230	C	T	SNP	GGT7	ENST00000336431	human	ensembl	74_37	-1	novel	silent	c.291	p.A97	0.000	NULL	pfam_GGT_peptidase,prints_GGT_peptidase	-	no_errors	GGT7	HGNC	ENSG00000131067	tier1	-	-	30	0	0.00	33	43	55.84
GLG1	0	genome.wustl.edu	37	16	74526855	74526855	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	74526855	74526855	C	G	SNP	GLG1	ENST00000205061	human	ensembl	74_37	-1	known	missense	c.1234	p.G412R	1.000	pfam_Cys-rich_GLG1_repeat	pfam_Cys-rich_GLG1_repeat	-	no_errors	GLG1	HGNC	ENSG00000090863	tier1	-	-	30	0	0.00	19	16	45.71
GLI3	0	genome.wustl.edu	37	7	42085011	42085011	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	42085011	42085011	G	A	SNP	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	silent	c.798	p.I266	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571	tier1	-	-	53	0	0.00	67	37	35.24
GLUD1P2	0	genome.wustl.edu	37	10	48980252	48980252	+	RNA	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	48980252	48980252	C	G	SNP	GLUD1P2	ENST00000594520	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	GLUD1P2	HGNC	ENSG00000227781	tier1	-	-	14	0	0.00	27	11	28.95
GMEB1	0	genome.wustl.edu	37	1	29041386	29041387	+	RNA	DEL	AA	AA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	29041386	29041387	AA	-	DEL	GMEB1	ENST00000480454	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.252:0.049	-	-	-	no_errors	GMEB1	HGNC	ENSG00000162419	tier1			20	0	0.00	6	5	45.45
GOLGA2	0	genome.wustl.edu	37	9	131019390	131019390	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	131019390	131019390	A	-	DEL	GOLGA2	ENST00000421699	human	ensembl	74_37	-1	known	frame_shift_del	c.2965	p.Y989fs	1.000	NULL	superfamily_CofA_tubulin-bd	-	no_errors	GOLGA2	HGNC	ENSG00000167110	tier1			30	0	0.00	66	13	16.46
GOLGA2	0	genome.wustl.edu	37	9	131020798	131020798	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	131020798	131020798	T	G	SNP	GOLGA2	ENST00000421699	human	ensembl	74_37	-1	known	missense	c.2144	p.E715A	0.004	NULL	superfamily_CofA_tubulin-bd	-	no_errors	GOLGA2	HGNC	ENSG00000167110				11	0	0.00	33	6	15.38
GOLGA2P5	0	genome.wustl.edu	37	12	100562921	100562921	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	100562921	100562921	T	-	DEL	GOLGA2P5	ENST00000421840	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GOLGA2B	Clone_based_vega_gene	ENSG00000238105	tier1			25	0	0.00	14	8	36.36
GOLGA8DP	0	genome.wustl.edu	37	15	22709152	22709152	+	RNA	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	22709152	22709152	G	T	SNP	GOLGA8DP	ENST00000314246	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.154	-	-	-	no_errors	GOLGA8DP	HGNC	ENSG00000185182				66	0	0.00	121	10	7.63
GOLPH3	0	genome.wustl.edu	37	5	32143921	32143922	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	32143921	32143922	-	A	INS	GOLPH3	ENST00000265070	human	ensembl	74_37	-1	known	frame_shift_ins	c.291_290	p.L97fs	1.000:1.000	pfam_GPP34	pfam_GPP34	-	no_errors	GOLPH3	HGNC	ENSG00000113384	tier1			53	0	0.00	95	21	18.10
GON4L	0	genome.wustl.edu	37	1	155734981	155734981	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	155734981	155734981	G	-	DEL	GON4L	ENST00000368331	human	ensembl	74_37	-1	known	frame_shift_del	c.4283	p.P1428fs	0.079	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580	tier1			53	0	0.00	49	12	19.67
GPAA1	0	genome.wustl.edu	37	8	145138709	145138710	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	145138709	145138710	CT	-	DEL	GPAA1	ENST00000355091	human	ensembl	74_37	+1	known	frame_shift_del	c.459_460	p.S154fs	0.052:0.022	pfam_Gaa1,pirsf_GPI_prot_transamidse_cplx_GAA1	pfam_Gaa1,pirsf_GPI_prot_transamidse_cplx_GAA1	-	no_errors	GPAA1	HGNC	ENSG00000197858	tier1			29	0	0.00	99	36	26.67
GPATCH4	0	genome.wustl.edu	37	1	156565387	156565389	+	In_Frame_Del	DEL	TTC	TTC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTC	TTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	156565387	156565389	TTC	-	DEL	GPATCH4	ENST00000438976	human	ensembl	74_37	-1	known	in_frame_del	c.746_744	p.K249in_frame_del	0.959:0.981:0.986	NULL	pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	GPATCH4	HGNC	ENSG00000160818	tier1			94	0	0.00	102	12	10.53
GPC2	0	genome.wustl.edu	37	7	99767927	99767927	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	99767927	99767927	C	-	DEL	GPC2	ENST00000292377	human	ensembl	74_37	-1	known	frame_shift_del	c.1666	p.A556fs	0.006	NULL	pfam_Glypican	-	no_errors	GPC2	HGNC	ENSG00000213420	tier1			80	0	0.00	87	25	22.32
GPD2	0	genome.wustl.edu	37	2	157407142	157407142	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	157407142	157407142	T	C	SNP	GPD2	ENST00000310454	human	ensembl	74_37	+1	known	silent	c.855	p.C285	1.000	pfam_FAD-dep_OxRdtase	pfam_FAD-dep_OxRdtase,pfam_FAD_bind_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_G3P_DH_FAD-dep	-	no_errors	GPD2	HGNC	ENSG00000115159	tier1	-	-	33	0	0.00	22	18	45.00
GPER1	0	genome.wustl.edu	37	7	1131884	1131884	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	1131884	1131884	G	A	SNP	GPER1	ENST00000297469	human	ensembl	74_37	+1	known	missense	c.520	p.A174T	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPER1	HGNC	ENSG00000164850	tier1	-	-	34	0	0.00	46	21	30.43
GPN1	0	genome.wustl.edu	37	2	27858031	27858031	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	27858031	27858031	A	G	SNP	GPN1	ENST00000264718	human	ensembl	74_37	+1	known	missense	c.496	p.I166V	1.000	pfam_Uncharacterised_ATP-bd,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Uncharacterised_ATP-bd,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	GPN1	HGNC	ENSG00000198522	tier1	-	-	110	0	0.00	113	86	43.22
GPR113	0	genome.wustl.edu	37	2	26535919	26535919	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	26535919	26535919	C	T	SNP	GPR113	ENST00000333478	human	ensembl	74_37	-1	known	silent	c.948	p.A316	0.001	pfam_DUF3497	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR113	HGNC	ENSG00000173567	tier1	-	-	39	0	0.00	50	26	34.21
GPR125	0	genome.wustl.edu	37	4	22414846	22414846	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	22414846	22414846	T	C	SNP	GPR125	ENST00000334304	human	ensembl	74_37	-1	known	missense	c.2191	p.T731A	0.940	pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_GPCR_2_extracellular_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom	-	no_errors	GPR125	HGNC	ENSG00000152990	tier1	-	-	63	0	0.00	71	13	15.48
GPR141	0	genome.wustl.edu	37	7	37780310	37780310	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	37780310	37780310	C	G	SNP	GPR141	ENST00000334425	human	ensembl	74_37	+1	known	missense	c.315	p.F105L	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR141	HGNC	ENSG00000187037	tier1	-	-	37	0	0.00	42	26	38.24
GPR142	0	genome.wustl.edu	37	17	72363813	72363813	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	72363813	72363813	A	G	SNP	GPR142	ENST00000335666	human	ensembl	74_37	+1	known	missense	c.169	p.R57G	1.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR142	HGNC	ENSG00000257008	tier1	-	-	33	0	0.00	20	31	60.78
GPR153	0	genome.wustl.edu	37	1	6311533	6311533	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	6311533	6311533	C	T	SNP	GPR153	ENST00000377893	human	ensembl	74_37	-1	known	missense	c.844	p.V282M	0.930	pfam_GPCR_Rhodpsn,prints_GCR_153/162	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR153,prints_GCR_153/162	-	no_errors	GPR153	HGNC	ENSG00000158292	tier1	-	-	16	0	0.00	18	13	41.94
GPR32	0	genome.wustl.edu	37	19	51274615	51274615	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	51274615	51274615	G	A	SNP	GPR32	ENST00000270590	human	ensembl	74_37	+1	known	missense	c.758	p.R253Q	0.887	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Formyl_pep_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Formyl_pep_rcpt	-	no_errors	GPR32	HGNC	ENSG00000142511	tier1	-	-	65	0	0.00	25	49	66.22
GPR37	0	genome.wustl.edu	37	7	124386623	124386623	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	124386623	124386623	G	A	SNP	GPR37	ENST00000303921	human	ensembl	74_37	-1	known	missense	c.1798	p.R600C	0.989	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR37_orph,prints_GPCR_Rhodpsn	-	no_errors	GPR37	HGNC	ENSG00000170775	tier1	rs200937236	-	29	0	0.00	19	17	45.95
GPRIN3	0	genome.wustl.edu	37	4	90169281	90169281	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	90169281	90169281	C	A	SNP	GPRIN3	ENST00000333209	human	ensembl	74_37	-1	known	nonsense	c.1981	p.G661*	0.981	NULL	NULL	-	no_errors	GPRIN3	HGNC	ENSG00000185477	tier1	-	-	53	0	0.00	23	21	47.73
GPT	0	genome.wustl.edu	37	8	145732306	145732306	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	145732306	145732306	C	-	DEL	GPT	ENST00000394955	human	ensembl	74_37	+1	known	frame_shift_del	c.1414	p.L474fs	1.000	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase	-	no_errors	GPT	HGNC	ENSG00000167701	tier1			35	0	0.00	97	26	21.14
GRAMD4	0	genome.wustl.edu	37	22	47062721	47062721	+	Splice_Site	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	47062721	47062721	G	-	DEL	GRAMD4	ENST00000361034	human	ensembl	74_37	+1	known	splice_site_del	c.810-1	e9-1	1.000	-	-	-	no_errors	GRAMD4	HGNC	ENSG00000075240	tier1			32	0	0.00	49	15	23.44
GRB10	0	genome.wustl.edu	37	7	50737427	50737427	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	50737427	50737427	C	T	SNP	GRB10	ENST00000398812	human	ensembl	74_37	-1	known	missense	c.496	p.A166T	0.000	smart_Ras-assoc,pfscan_Ras-assoc	pfam_BPS-dom,pfam_SH2,pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SH2,prints_SH2	-	no_errors	GRB10	HGNC	ENSG00000106070	tier1	-	-	48	0	0.00	55	17	23.61
GRB14	0	genome.wustl.edu	37	2	165365288	165365288	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	165365288	165365288	T	-	DEL	GRB14	ENST00000263915	human	ensembl	74_37	-1	known	frame_shift_del	c.891	p.K297fs	0.015	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_BPS-dom,pfam_SH2,pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SH2,prints_SH2	-	no_errors	GRB14	HGNC	ENSG00000115290	tier1			42	0	0.00	33	9	21.43
GRIN1	0	genome.wustl.edu	37	9	140059553	140059553	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	140059553	140059553	C	T	SNP	GRIN1	ENST00000471122	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.986	-	-	-	no_errors	GRIN1	HGNC	ENSG00000176884	tier1	-	-	32	0	0.00	31	26	45.61
GRIP1	0	genome.wustl.edu	37	12	66990679	66990679	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	66990679	66990679	G	A	SNP	GRIP1	ENST00000359742	human	ensembl	74_37	-1	known	silent	c.84	p.S28	1.000	superfamily_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	GRIP1	HGNC	ENSG00000155974	tier1	-	-	35	0	0.00	21	14	40.00
GSN	0	genome.wustl.edu	37	9	124074813	124074813	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	124074813	124074813	A	G	SNP	GSN	ENST00000485767	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GSN	HGNC	ENSG00000148180	tier1	-	-	11	0	0.00	33	10	23.26
GSR	0	genome.wustl.edu	37	8	30546820	30546820	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	30546820	30546820	T	-	DEL	GSR	ENST00000221130	human	ensembl	74_37	-1	known	frame_shift_del	c.899	p.K300fs	1.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_OxRdtase_NAD-bd_dom,tigrfam_Glutathione_Rdtase_euk/bac	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_nucl-diS_OxRdtase_dimer,pfam_Pyr_OxRdtase_NAD-bd_dom,superfamily_FAD/NAD-linked_Rdtase_dimer,prints_FAD_pyr_nucl-diS_OxRdtase,prints_Hg_reductase,prints_Pyridine_nuc-diS_OxRdtase_2,tigrfam_Glutathione_Rdtase_euk/bac	-	no_errors	GSR	HGNC	ENSG00000104687	tier1			31	0	0.00	8	16	66.67
GTF3C1	0	genome.wustl.edu	37	16	27475971	27475972	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	27475971	27475972	-	G	INS	GTF3C1	ENST00000356183	human	ensembl	74_37	-1	known	frame_shift_ins	c.5542_5541	p.E1847fs	0.012:0.000	NULL	pfam_TFIIIC_Bblock-bd	-	no_errors	GTF3C1	HGNC	ENSG00000077235	tier1			33	0	0.00	53	15	22.06
GTF3C1	0	genome.wustl.edu	37	16	27475971	27475972	+	Frame_Shift_Ins	INS	-	-	GG			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	27475971	27475972	-	GG	INS	GTF3C1	ENST00000356183	human	ensembl	74_37	-1	known	frame_shift_ins	c.5542_5541	p.E1847fs	0.012:0.000	NULL	pfam_TFIIIC_Bblock-bd	-	no_errors	GTF3C1	HGNC	ENSG00000077235	tier1			33	0	0.00	57	11	16.18
GTF3C1	0	genome.wustl.edu	37	16	27506096	27506096	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	27506096	27506096	T	A	SNP	GTF3C1	ENST00000356183	human	ensembl	74_37	-1	known	missense	c.2766	p.Q922H	1.000	NULL	pfam_TFIIIC_Bblock-bd	-	no_errors	GTF3C1	HGNC	ENSG00000077235	tier1	-	-	26	0	0.00	25	15	37.50
GTF3C3	0	genome.wustl.edu	37	2	197653994	197653994	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	197653994	197653994	C	T	SNP	GTF3C3	ENST00000263956	human	ensembl	74_37	-1	known	missense	c.827	p.R276H	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	GTF3C3	HGNC	ENSG00000119041	tier1	-	-	45	0	0.00	65	5	7.14
GTPBP2	0	genome.wustl.edu	37	6	43596716	43596717	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	43596716	43596717	-	G	INS	GTPBP2	ENST00000307126	human	ensembl	74_37	-1	known	frame_shift_ins	c.184_183	p.E61fs	1.000:0.961	NULL	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_B-barrel	-	no_errors	GTPBP2	HGNC	ENSG00000172432	tier1			50	0	0.00	53	17	24.29
GUF1	0	genome.wustl.edu	37	4	44690095	44690095	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	44690095	44690095	T	C	SNP	GUF1	ENST00000281543	human	ensembl	74_37	+1	known	missense	c.1010	p.L337S	1.000	pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_B-barrel,tigrfam_EF-4	pfam_EF_GTP-bd_dom,pfam_LepA_GTP-bd_C,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,pfam_Small_GTPase,superfamily_P-loop_NTPase,superfamily_EFG_III-V,superfamily_Transl_B-barrel,prints_EF_GTP-bd_dom,tigrfam_EF-4,tigrfam_Small_GTP-bd_dom	-	no_errors	GUF1	HGNC	ENSG00000151806	tier1	-	-	59	0	0.00	73	13	15.12
GUK1	0	genome.wustl.edu	37	1	228333720	228333720	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	228333720	228333720	C	T	SNP	GUK1	ENST00000460224	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	GUK1	HGNC	ENSG00000143774	tier1	-	-	45	0	0.00	28	41	58.57
GVINP1	0	genome.wustl.edu	37	11	6741491	6741491	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	6741491	6741491	T	-	DEL	GVINP1	ENST00000526769	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GVINP1	HGNC	ENSG00000254838	tier1			15	0	0.00	20	4	16.67
GYS2	0	genome.wustl.edu	37	12	21715887	21715887	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	21715887	21715887	G	C	SNP	GYS2	ENST00000261195	human	ensembl	74_37	-1	known	missense	c.1027	p.L343V	0.999	pfam_Glycogen_synth	pfam_Glycogen_synth,pfam_Glyco_trans_1	-	no_errors	GYS2	HGNC	ENSG00000111713	tier1	-	-	70	0	0.00	48	43	47.25
GZF1	0	genome.wustl.edu	37	20	23350283	23350283	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	23350283	23350283	C	T	SNP	GZF1	ENST00000338121	human	ensembl	74_37	+1	known	missense	c.1690	p.R564C	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	GZF1	HGNC	ENSG00000125812	tier1	-	-	16	0	0.00	29	16	35.56
H2AFY	0	genome.wustl.edu	37	5	134705060	134705060	+	RNA	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	134705060	134705060	C	A	SNP	H2AFY	ENST00000506532	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	H2AFY	HGNC	ENSG00000113648	tier1	-	-	37	0	0.00	43	22	33.85
HACE1	0	genome.wustl.edu	37	6	105192413	105192413	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	105192413	105192413	A	G	SNP	HACE1	ENST00000262903	human	ensembl	74_37	-1	known	missense	c.2416	p.Y806H	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_Ankyrin_rpt,superfamily_HECT,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_HECT,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_HECT,prints_Ankyrin_rpt	-	no_errors	HACE1	HGNC	ENSG00000085382	tier1	-	-	37	0	0.00	34	16	32.00
HCCS	0	genome.wustl.edu	37	X	11135400	11135400	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	11135400	11135400	A	T	SNP	HCCS	ENST00000321143	human	ensembl	74_37	+1	known	missense	c.266	p.N89I	1.000	pfam_Cyt_C/C1_haem_lyase	pfam_Cyt_C/C1_haem_lyase	-	no_errors	HCCS	HGNC	ENSG00000004961	tier1	-	-	25	0	0.00	7	17	70.83
HDAC4	0	genome.wustl.edu	37	2	240002800	240002800	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	240002800	240002800	G	A	SNP	HDAC4	ENST00000345617	human	ensembl	74_37	-1	known	missense	c.2726	p.A909V	0.955	pfam_His_deacetylse_dom,pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pfam_Arb2_domain,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC4	HGNC	ENSG00000068024	tier1	-	-	34	0	0.00	49	28	36.36
HDAC9	0	genome.wustl.edu	37	7	18674336	18674336	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	18674336	18674336	T	C	SNP	HDAC9	ENST00000441542	human	ensembl	74_37	+1	known	missense	c.883	p.S295P	1.000	pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC9	HGNC	ENSG00000048052	tier1	-	-	82	0	0.00	112	23	17.04
HECTD4	0	genome.wustl.edu	37	12	112630932	112630932	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	112630932	112630932	C	T	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	missense	c.8503	p.V2835M	1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064	tier1	-	-	49	0	0.00	39	9	18.75
HEG1	0	genome.wustl.edu	37	3	124733606	124733606	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	124733606	124733606	G	A	SNP	HEG1	ENST00000477536	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	HEG1	HGNC	ENSG00000173706	tier1	-	-	21	0	0.00	30	15	33.33
HELZ2	0	genome.wustl.edu	37	20	62193250	62193251	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	62193250	62193251	-	G	INS	HELZ2	ENST00000467148	human	ensembl	74_37	-1	known	frame_shift_ins	c.6617_6616	p.R2206fs	0.000:0.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	HELZ2	HGNC	ENSG00000130589	tier1			14	0	0.00	31	7	18.42
HELZ2	0	genome.wustl.edu	37	20	62195615	62195615	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	62195615	62195615	C	T	SNP	HELZ2	ENST00000467148	human	ensembl	74_37	-1	known	silent	c.4560	p.A1520	0.005	NULL	superfamily_P-loop_NTPase	-	no_errors	HELZ2	HGNC	ENSG00000130589	tier1	-	-	22	0	0.00	48	28	36.84
HEPHL1	0	genome.wustl.edu	37	11	93796775	93796775	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	93796775	93796775	G	A	SNP	HEPHL1	ENST00000315765	human	ensembl	74_37	+1	known	missense	c.517	p.A173T	0.999	pfam_Cu-oxidase_3,superfamily_Cupredoxin	pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Cupredoxin	-	no_errors	HEPHL1	HGNC	ENSG00000181333	tier1	-	-	38	0	0.00	57	27	31.76
HERC4	0	genome.wustl.edu	37	10	69716603	69716603	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	69716603	69716603	A	-	DEL	HERC4	ENST00000480158	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HERC4	HGNC	ENSG00000148634	tier1			14	0	0.00	10	12	54.55
HEXDC	0	genome.wustl.edu	37	17	80397532	80397532	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	80397532	80397532	G	A	SNP	HEXDC	ENST00000337014	human	ensembl	74_37	+1	known	missense	c.925	p.E309K	1.000	superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_20_cat-core,superfamily_Glycoside_hydrolase_SF	-	no_errors	HEXDC	HGNC	ENSG00000169660	tier1	-	-	98	0	0.00	95	96	50.26
HEXDC	0	genome.wustl.edu	37	17	80400297	80400298	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	80400297	80400298	-	G	INS	HEXDC	ENST00000337014	human	ensembl	74_37	+1	known	frame_shift_ins	c.1587_1588	p.A531fs	0.001:0.000	NULL	pfam_Glyco_hydro_20_cat-core,superfamily_Glycoside_hydrolase_SF	-	no_errors	HEXDC	HGNC	ENSG00000169660	tier1			18	0	0.00	23	22	48.89
HEY2	0	genome.wustl.edu	37	6	126080617	126080617	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	126080617	126080617	C	T	SNP	HEY2	ENST00000368364	human	ensembl	74_37	+1	known	missense	c.683	p.T228M	1.000	NULL	pfam_bHLH_dom,pfam_Orange,superfamily_bHLH_dom,smart_bHLH_dom,smart_Orange_subgr,pfscan_Orange,pfscan_bHLH_dom,prints_Antifreeze_1	-	no_errors	HEY2	HGNC	ENSG00000135547	tier1	-	-	17	0	0.00	16	16	50.00
HHIP	0	genome.wustl.edu	37	4	145580090	145580090	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	145580090	145580090	G	T	SNP	HHIP	ENST00000296575	human	ensembl	74_37	+1	known	missense	c.621	p.E207D	1.000	pfam_Folate_rcpt-like,superfamily_Quinoprot_gluc/sorb_DH	pfam_Folate_rcpt-like,superfamily_Quinoprot_gluc/sorb_DH,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	HHIP	HGNC	ENSG00000164161	tier1	-	-	39	0	0.00	16	7	30.43
HIAT1	0	genome.wustl.edu	37	1	100547662	100547662	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	100547662	100547662	G	T	SNP	HIAT1	ENST00000370152	human	ensembl	74_37	+1	known	missense	c.1370	p.R457M	0.987	NULL	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Tet-R_TetA/multi-R_MdtG	-	no_errors	HIAT1	HGNC	ENSG00000156875	tier1	-	-	27	0	0.00	14	9	39.13
HIST1H3I	0	genome.wustl.edu	37	6	27839733	27839733	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	27839733	27839733	T	A	SNP	HIST1H3I	ENST00000328488	human	ensembl	74_37	-1	known	missense	c.361	p.M121L	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST1H3I	HGNC	ENSG00000182572	tier1	-	-	43	0	0.00	33	25	43.10
HIST2H2BF	0	genome.wustl.edu	37	1	149783804	149783806	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	149783804	149783806	CTT	-	DEL	HIST2H2BF	ENST00000427880	human	ensembl	74_37	-1	known	in_frame_del	c.75_73	p.K25in_frame_del	0.914:1.000:1.000	superfamily_Histone-fold	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST2H2BF	HGNC	ENSG00000203814	tier1			93	0	0.00	109	26	19.26
HLA-G	0	genome.wustl.edu	37	6	29797635	29797635	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	29797635	29797635	C	T	SNP	HLA-G	ENST00000376828	human	ensembl	74_37	+1	known	missense	c.953	p.A318V	0.002	NULL	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-G	HGNC	ENSG00000204632	tier1	-	-	97	0	0.00	87	40	31.50
HM13	0	genome.wustl.edu	37	20	30142485	30142485	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	30142485	30142485	A	-	DEL	HM13	ENST00000474466	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.172	-	-	-	no_errors	HM13	HGNC	ENSG00000101294	tier1			11	0	0.00	35	15	30.00
HMGN2P46	0	genome.wustl.edu	37	15	45848231	45848233	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	45848231	45848233	TTT	-	DEL	HMGN2P46	ENST00000313559	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997:0.996:0.997	-	-	-	no_errors	HMGN2P46	HGNC	ENSG00000179362	tier1			18	0	0.00	14	8	36.36
HMMR	0	genome.wustl.edu	37	5	162917426	162917426	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	162917426	162917426	A	-	DEL	HMMR	ENST00000393915	human	ensembl	74_37	+1	known	frame_shift_del	c.1993	p.K667fs	1.000	NULL	NULL	-	no_errors	HMMR	HGNC	ENSG00000072571	tier1			25	0	0.00	19	6	24.00
HNF4G	0	genome.wustl.edu	37	8	76459907	76459907	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	76459907	76459907	A	-	DEL	HNF4G	ENST00000396423	human	ensembl	74_37	+1	known	frame_shift_del	c.343	p.E117fs	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Retinoid-X_rcpt/HNF4	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF,prints_Retinoid-X_rcpt/HNF4	-	no_errors	HNF4G	HGNC	ENSG00000164749	tier1			60	0	0.00	61	29	32.22
HNRNPA1P48	0	genome.wustl.edu	37	16	51679811	51679811	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	51679811	51679811	A	G	SNP	HNRNPA1P48	ENST00000562726	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HNRNPA1P48	HGNC	ENSG00000224578	tier1	-	-	28	0	0.00	21	10	31.25
HNRNPA1P48	0	genome.wustl.edu	37	16	51680669	51680670	+	RNA	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	51680669	51680670	-	T	INS	HNRNPA1P48	ENST00000562726	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	HNRNPA1P48	HGNC	ENSG00000224578	tier1			13	0	0.00	23	19	45.24
HNRNPK	0	genome.wustl.edu	37	9	86586596	86586596	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	86586596	86586596	G	A	SNP	HNRNPK	ENST00000376263	human	ensembl	74_37	-1	known	silent	c.999	p.Y333	0.647	NULL	pfam_KH_dom_type_1,pfam_ROK_N,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	HNRNPK	HGNC	ENSG00000165119	tier1	-	-	59	0	0.00	26	29	51.79
HOXA9	0	genome.wustl.edu	37	7	27202966	27202966	+	RNA	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	27202966	27202966	C	-	DEL	HOXA9	ENST00000487384	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	HOXA9	HGNC	ENSG00000078399	tier1			20	0	0.00	23	9	28.12
HOXB3	0	genome.wustl.edu	37	17	46628044	46628044	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	46628044	46628044	G	A	SNP	HOXB3	ENST00000311626	human	ensembl	74_37	-1	known	silent	c.948	p.G316	0.998	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB3	HGNC	ENSG00000120093	tier1	-	-	37	0	0.00	49	18	26.87
HPX	0	genome.wustl.edu	37	11	6461701	6461701	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	6461701	6461701	A	-	DEL	HPX	ENST00000265983	human	ensembl	74_37	-1	known	frame_shift_del	c.210	p.F70fs	0.998	pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat,pirsf_Hemopexin_chordata	pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat,pirsf_Hemopexin_chordata	-	no_errors	HPX	HGNC	ENSG00000110169	tier1			26	0	0.00	16	18	52.94
HRNR	0	genome.wustl.edu	37	1	152187979	152187979	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	152187979	152187979	G	A	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	silent	c.6126	p.H2042	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915	tier1	-	-	107	0	0.00	102	17	14.29
HSD11B1	0	genome.wustl.edu	37	1	209880402	209880402	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	209880402	209880402	T	-	DEL	HSD11B1	ENST00000261465	human	ensembl	74_37	+1	known	frame_shift_del	c.446	p.V149fs	0.998	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH	-	no_errors	HSD11B1	HGNC	ENSG00000117594	tier1			20	0	0.00	14	6	30.00
HSP90B1	0	genome.wustl.edu	37	12	104341424	104341424	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	104341424	104341424	A	-	DEL	HSP90B1	ENST00000299767	human	ensembl	74_37	+1	known	frame_shift_del	c.2396	p.D801fs	0.998	NULL	pirsf_Hsp90_fam,pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,prints_Hsp90_N	-	no_errors	HSP90B1	HGNC	ENSG00000166598	tier1			50	0	0.00	28	31	52.54
HSPA12A	0	genome.wustl.edu	37	10	118464786	118464786	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	118464786	118464786	C	T	SNP	HSPA12A	ENST00000369209	human	ensembl	74_37	-1	known	missense	c.130	p.D44N	1.000	NULL	NULL	-	no_errors	HSPA12A	HGNC	ENSG00000165868	tier1	-	-	39	0	0.00	62	32	34.04
HSPA6	0	genome.wustl.edu	37	1	161496162	161496162	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	161496162	161496162	A	G	SNP	HSPA6	ENST00000309758	human	ensembl	74_37	+1	known	missense	c.1714	p.M572V	0.562	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA6	HGNC	ENSG00000173110				44	0	0.00	71	5	6.58
HTR1B	0	genome.wustl.edu	37	6	78172236	78172236	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	78172236	78172236	G	A	SNP	HTR1B	ENST00000369947	human	ensembl	74_37	-1	known	silent	c.885	p.S295	0.938	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT1B_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT1B_rcpt,prints_5HT_rcpt,prints_ADR_fam	-	no_errors	HTR1B	HGNC	ENSG00000135312	tier1	-	-	23	0	0.00	23	6	20.69
HTR1E	0	genome.wustl.edu	37	6	87726135	87726135	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	87726135	87726135	C	T	SNP	HTR1E	ENST00000305344	human	ensembl	74_37	+1	known	silent	c.1083	p.C361	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT_rcpt	-	no_errors	HTR1E	HGNC	ENSG00000168830	tier1	-	-	64	0	0.00	38	26	40.62
HUWE1	0	genome.wustl.edu	37	X	53576405	53576405	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	53576405	53576405	C	T	SNP	HUWE1	ENST00000262854	human	ensembl	74_37	-1	known	missense	c.9550	p.E3184K	1.000	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/Ts_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758	tier1	-	-	19	0	0.00	9	12	57.14
HYAL3	0	genome.wustl.edu	37	3	50332292	50332292	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	50332292	50332292	G	A	SNP	HYAL3	ENST00000336307	human	ensembl	74_37	-1	known	missense	c.742	p.P248S	0.944	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Hyaluronidase	-	no_errors	HYAL3	HGNC	ENSG00000186792	tier1	-	-	52	0	0.00	56	32	36.36
IARS	0	genome.wustl.edu	37	9	95002935	95002935	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	95002935	95002935	A	-	DEL	IARS	ENST00000375627	human	ensembl	74_37	-1	known	frame_shift_del	c.481	p.W161fs	0.046	NULL	NULL	-	no_errors	IARS	HGNC	ENSG00000196305	tier1			13	0	0.00	15	5	25.00
ICAM5	0	genome.wustl.edu	37	19	10403406	10403406	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	10403406	10403406	G	A	SNP	ICAM5	ENST00000221980	human	ensembl	74_37	+1	known	silent	c.1080	p.A360	0.000	smart_Ig_sub	pfam_Ig_I-set,pfam_ICAM_N,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom,prints_ICAM_VCAM_N,prints_ICAM	-	no_errors	ICAM5	HGNC	ENSG00000105376	tier1	-	-	17	0	0.00	31	22	41.51
IFI44	0	genome.wustl.edu	37	1	79129487	79129487	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	79129487	79129487	A	-	DEL	IFI44	ENST00000370747	human	ensembl	74_37	+1	known	frame_shift_del	c.1326	p.K444fs	0.000	NULL	pfam_TLDc,superfamily_P-loop_NTPase	-	no_errors	IFI44	HGNC	ENSG00000137965	tier1			45	0	0.00	41	19	31.67
IFIT5	0	genome.wustl.edu	37	10	91177806	91177806	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	91177806	91177806	T	C	SNP	IFIT5	ENST00000371795	human	ensembl	74_37	+1	known	missense	c.850	p.F284L	1.000	NULL	pfam_TPR_2,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	IFIT5	HGNC	ENSG00000152778	tier1	-	-	21	0	0.00	23	15	39.47
IFT140	0	genome.wustl.edu	37	16	1634250	1634250	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	1634250	1634250	C	T	SNP	IFT140	ENST00000426508	human	ensembl	74_37	-1	known	missense	c.1327	p.D443N	0.999	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	IFT140	HGNC	ENSG00000187535				18	0	0.00	16	3	15.79
IGDCC3	0	genome.wustl.edu	37	15	65628266	65628266	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	65628266	65628266	C	A	SNP	IGDCC3	ENST00000327987	human	ensembl	74_37	-1	known	missense	c.438	p.Q146H	0.999	pfam_Ig_I-set,smart_Ig_sub	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGDCC3	HGNC	ENSG00000174498	tier1	-	-	40	0	0.00	23	51	68.92
IGDCC4	0	genome.wustl.edu	37	15	65702608	65702608	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	65702608	65702608	G	A	SNP	IGDCC4	ENST00000352385	human	ensembl	74_37	-1	novel	silent	c.471	p.N157	0.011	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGDCC4	HGNC	ENSG00000103742	tier1	-	-	30	0	0.00	8	29	78.38
IL2RG	0	genome.wustl.edu	37	X	70330527	70330527	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	70330527	70330527	G	A	SNP	IL2RG	ENST00000374202	human	ensembl	74_37	-1	known	missense	c.281	p.S94L	0.000	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	pfam_IL-6_rcpt_alpha-bd,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL2RG	HGNC	ENSG00000147168	tier1	-	-	22	0	0.00	8	17	68.00
IL34	0	genome.wustl.edu	37	16	70690943	70690943	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	70690943	70690943	C	T	SNP	IL34	ENST00000288098	human	ensembl	74_37	+1	known	silent	c.321	p.D107	0.103	prints_IL-34	prints_IL-34	-	no_errors	IL34	HGNC	ENSG00000157368	tier1	-	-	34	0	0.00	44	22	33.33
IL36G	0	genome.wustl.edu	37	2	113742537	113742537	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	113742537	113742537	G	T	SNP	IL36G	ENST00000259205	human	ensembl	74_37	+1	known	missense	c.421	p.A141S	0.124	pfam_IL-1,superfamily_Cytokine_IL1-like,smart_IL-1,prints_IL-1RA/IL-36,prints_IL-1	pfam_IL-1,superfamily_Cytokine_IL1-like,smart_IL-1,prints_IL-1RA/IL-36,prints_IL-1	-	no_errors	IL36G	HGNC	ENSG00000136688				27	0	0.00	68	4	5.56
INF2	0	genome.wustl.edu	37	14	105180705	105180705	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	105180705	105180705	C	T	SNP	INF2	ENST00000392634	human	ensembl	74_37	+1	known	missense	c.3206	p.P1069L	0.011	NULL	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_WH2_dom,superfamily_ARM-type_fold,smart_FH2_Formin,pfscan_WH2_dom	-	no_errors	INF2	HGNC	ENSG00000203485	tier1	-	-	34	0	0.00	13	77	84.62
ING4	0	genome.wustl.edu	37	12	6762111	6762111	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	6762111	6762111	C	A	SNP	ING4	ENST00000412586	human	ensembl	74_37	-1	known	nonsense	c.382	p.E128*	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	ING4	HGNC	ENSG00000111653				16	0	0.00	28	2	6.67
INPP5F	0	genome.wustl.edu	37	10	121551401	121551401	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	121551401	121551401	G	T	SNP	INPP5F	ENST00000361976	human	ensembl	74_37	+1	known	missense	c.465	p.K155N	1.000	pfam_Syja_N	pfam_Syja_N,pfam_Inositol_phosphatase,pfscan_Syja_N	-	no_errors	INPP5F	HGNC	ENSG00000198825				19	0	0.00	36	2	5.26
INTU	0	genome.wustl.edu	37	4	128605591	128605591	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	128605591	128605591	G	T	SNP	INTU	ENST00000335251	human	ensembl	74_37	+1	known	missense	c.1209	p.M403I	1.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	INTU	HGNC	ENSG00000164066				45	0	0.00	43	4	8.51
IPO5	0	genome.wustl.edu	37	13	98655251	98655251	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	98655251	98655251	T	C	SNP	IPO5	ENST00000261574	human	ensembl	74_37	+1	known	missense	c.1511	p.V504A	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,pfscan_Importin-beta_N	-	no_errors	IPO5	HGNC	ENSG00000065150	tier1	-	-	22	0	0.00	27	7	20.59
IQCA1	0	genome.wustl.edu	37	2	237240170	237240170	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	237240170	237240170	C	T	SNP	IQCA1	ENST00000409907	human	ensembl	74_37	-1	known	silent	c.2205	p.A735	0.000	superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCA1	HGNC	ENSG00000132321	tier1	-	-	33	0	0.00	39	19	32.76
IRF9	0	genome.wustl.edu	37	14	24632612	24632612	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	24632612	24632612	A	G	SNP	IRF9	ENST00000396864	human	ensembl	74_37	+1	known	silent	c.390	p.P130	0.004	NULL	pfam_Interferon_reg_fact_DNA-bd_dom,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF9	HGNC	ENSG00000213928	tier1	-	-	75	0	0.00	56	48	45.71
IRS1	0	genome.wustl.edu	37	2	227661663	227661664	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	227661663	227661664	-	C	INS	IRS1	ENST00000305123	human	ensembl	74_37	-1	known	frame_shift_ins	c.1792_1791	p.H597fs	1.000:0.995	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047	tier1			84	0	0.00	97	42	30.22
ITGA6	0	genome.wustl.edu	37	2	173335732	173335733	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	173335732	173335733	-	T	INS	ITGA6	ENST00000264106	human	ensembl	74_37	+1	known	frame_shift_ins	c.674_675	p.D228fs	1.000:1.000	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA6	HGNC	ENSG00000091409	tier1			37	0	0.00	55	15	21.43
ITGAM	0	genome.wustl.edu	37	16	31336608	31336608	+	Silent	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	31336608	31336608	G	T	SNP	ITGAM	ENST00000544665	human	ensembl	74_37	+1	known	silent	c.2391	p.G797	0.000	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAM	HGNC	ENSG00000169896				45	0	0.00	57	3	5.00
ITGAV	0	genome.wustl.edu	37	2	187521085	187521085	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	187521085	187521085	G	-	DEL	ITGAV	ENST00000261023	human	ensembl	74_37	+1	known	frame_shift_del	c.1676	p.G561fs	0.609	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGAV	HGNC	ENSG00000138448	tier1			20	0	0.00	22	9	29.03
ITIH5	0	genome.wustl.edu	37	10	7601825	7601825	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	7601825	7601825	T	-	DEL	ITIH5	ENST00000397146	human	ensembl	74_37	-1	known	frame_shift_del	c.2019	p.K673fs	0.008	NULL	pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH5	HGNC	ENSG00000123243	tier1			13	0	0.00	3	3	50.00
ITPKC	0	genome.wustl.edu	37	19	41223790	41223791	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	41223790	41223791	-	A	INS	ITPKC	ENST00000263370	human	ensembl	74_37	+1	known	frame_shift_ins	c.750_751	p.Q252fs	0.002:0.001	NULL	pfam_IPK	-	no_errors	ITPKC	HGNC	ENSG00000086544	tier1			23	0	0.00	15	10	40.00
JAK1	0	genome.wustl.edu	37	1	65306997	65306997	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	65306997	65306997	T	-	DEL	JAK1	ENST00000342505	human	ensembl	74_37	-1	known	frame_shift_del	c.2580	p.K860fs	0.055	pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,superfamily_Kinase-like_dom	pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak1,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_FERM_domain,pfscan_SH2,pfscan_Prot_kinase_dom	-	no_errors	JAK1	HGNC	ENSG00000162434	tier1			43	0	0.00	42	15	26.32
JAK2	0	genome.wustl.edu	37	9	5044449	5044449	+	Silent	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	5044449	5044449	C	A	SNP	JAK2	ENST00000381652	human	ensembl	74_37	+1	known	silent	c.397	p.R133	1.000	smart_Band_41_domain,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,prints_Tyr_kinase_non-rcpt_Jak2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,pfscan_SH2,pfscan_Prot_kinase_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak2,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	JAK2	HGNC	ENSG00000096968	tier1	-	-	41	0	0.00	35	14	28.57
JKAMP	0	genome.wustl.edu	37	14	59965486	59965486	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	59965486	59965486	T	C	SNP	JKAMP	ENST00000356057	human	ensembl	74_37	+1	known	missense	c.524	p.L175S	0.997	pfam_DUF766	pfam_DUF766	-	no_errors	JKAMP	HGNC	ENSG00000050130	tier1	-	-	22	0	0.00	26	27	50.94
JMJD8	0	genome.wustl.edu	37	16	732799	732799	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	732799	732799	C	T	SNP	JMJD8	ENST00000293882	human	ensembl	74_37	-1	known	missense	c.1000	p.G334S	0.869	pfscan_JmjC_dom	pfam_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD8	HGNC	ENSG00000161999	tier1	rs201419838	-	45	0	0.00	19	31	60.78
JPH3	0	genome.wustl.edu	37	16	87677966	87677966	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	87677966	87677966	C	T	SNP	JPH3	ENST00000284262	human	ensembl	74_37	+1	known	missense	c.485	p.T162M	1.000	pirsf_Junctophilin	pirsf_Junctophilin,pfam_MORN,smart_MORN	-	no_errors	JPH3	HGNC	ENSG00000154118	tier1	-	-	61	0	0.00	85	45	34.62
JPH3	0	genome.wustl.edu	37	16	87678537	87678537	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	87678537	87678537	C	-	DEL	JPH3	ENST00000284262	human	ensembl	74_37	+1	known	frame_shift_del	c.1056	p.L354fs	1.000	pirsf_Junctophilin	pirsf_Junctophilin,pfam_MORN,smart_MORN	-	no_errors	JPH3	HGNC	ENSG00000154118	tier1			30	0	0.00	42	25	37.31
KALRN	0	genome.wustl.edu	37	3	124438073	124438073	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	124438073	124438073	G	C	SNP	KALRN	ENST00000360013	human	ensembl	74_37	+1	known	missense	c.8717	p.G2906A	0.752	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145	tier1	-	-	25	0	0.00	21	13	38.24
KAT2A	0	genome.wustl.edu	37	17	40270397	40270399	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	40270397	40270399	CTC	-	DEL	KAT2A	ENST00000225916	human	ensembl	74_37	-1	known	in_frame_del	c.1098_1096	p.E366in_frame_del	1.000:1.000:1.000	pirsf_Hist_acetylase_PCAF	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N,pfam_Bromodomain,pfam_GNAT_dom,superfamily_Bromodomain,superfamily_Acyl_CoA_acyltransferase,smart_Bromodomain,pfscan_Bromodomain,pfscan_GNAT_dom,prints_Bromodomain	-	no_errors	KAT2A	HGNC	ENSG00000108773	tier1			29	0	0.00	32	8	20.00
KAT6B	0	genome.wustl.edu	37	10	76780447	76780447	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	76780447	76780447	T	C	SNP	KAT6B	ENST00000287239	human	ensembl	74_37	+1	known	missense	c.2737	p.Y913H	1.000	pfam_MOZ_SAS,superfamily_Acyl_CoA_acyltransferase	pfam_MOZ_SAS,pfam_Znf_PHD-finger,pfam_Histone_H1/H5_H15,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6B	HGNC	ENSG00000156650	tier1	-	-	11	0	0.00	13	28	68.29
KATNAL1	0	genome.wustl.edu	37	13	30829644	30829644	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	30829644	30829644	C	A	SNP	KATNAL1	ENST00000380615	human	ensembl	74_37	-1	known	missense	c.432	p.K144N	0.998	NULL	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_ATPase_AAA-2,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	KATNAL1	HGNC	ENSG00000102781	tier1	-	-	65	0	0.00	41	37	47.44
KBTBD2	0	genome.wustl.edu	37	7	32914666	32914666	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	32914666	32914666	C	T	SNP	KBTBD2	ENST00000304056	human	ensembl	74_37	-1	known	missense	c.274	p.G92S	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_BACK,pfam_Kelch_1,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KBTBD2	HGNC	ENSG00000170852	tier1	-	-	88	0	0.00	76	50	39.68
KCNA6	0	genome.wustl.edu	37	12	4919431	4919431	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	4919431	4919431	G	A	SNP	KCNA6	ENST00000280684	human	ensembl	74_37	+1	known	missense	c.224	p.R75H	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv1	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.6,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA6	HGNC	ENSG00000151079	tier1	-	-	85	0	0.00	91	84	48.00
KCNC2	0	genome.wustl.edu	37	12	75601161	75601161	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	75601161	75601161	G	A	SNP	KCNC2	ENST00000549446	human	ensembl	74_37	-1	known	silent	c.603	p.P201	0.346	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC2	HGNC	ENSG00000166006	tier1	-	-	53	0	0.00	57	77	57.46
KCNC3	0	genome.wustl.edu	37	19	50824036	50824036	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	50824036	50824036	G	A	SNP	KCNC3	ENST00000477616	human	ensembl	74_37	-1	known	missense	c.1984	p.R662C	1.000	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_K_chnl_volt-dep_Kv3_ID,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3.3,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC3	HGNC	ENSG00000131398	tier1	-	-	75	0	0.00	31	110	78.01
KCNG3	0	genome.wustl.edu	37	2	42671596	42671596	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	42671596	42671596	C	T	SNP	KCNG3	ENST00000306078	human	ensembl	74_37	-1	known	silent	c.789	p.T263	0.003	pfam_Ion_trans_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNG3	HGNC	ENSG00000171126	tier1	-	-	16	0	0.00	30	6	16.67
KCNH4	0	genome.wustl.edu	37	17	40315711	40315711	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	40315711	40315711	C	G	SNP	KCNH4	ENST00000264661	human	ensembl	74_37	-1	known	missense	c.2390	p.G797A	0.000	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_fold,pfam_PAS_4,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH4	HGNC	ENSG00000089558	tier1	-	-	22	0	0.00	16	21	56.76
KCNJ12	0	genome.wustl.edu	37	17	21319498	21319498	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	21319498	21319498	G	A	SNP	KCNJ12	ENST00000331718	human	ensembl	74_37	+1	known	missense	c.844	p.G282S	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185	tier1	-	-	91	0	0.00	130	31	19.25
KCNMA1	0	genome.wustl.edu	37	10	78870005	78870005	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	78870005	78870005	C	T	SNP	KCNMA1	ENST00000406533	human	ensembl	74_37	-1	known	missense	c.1057	p.V353I	1.000	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl	pfam_K_chnl_Ca-activ_BK_asu,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_RCK_N,prints_K_chnl_Ca-activ_BK_asu,prints_K_chnl	-	no_errors	KCNMA1	HGNC	ENSG00000156113	tier1	-	-	60	0	0.00	47	16	25.40
KCNMB4	0	genome.wustl.edu	37	12	70824403	70824403	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	70824403	70824403	G	A	SNP	KCNMB4	ENST00000258111	human	ensembl	74_37	+1	known	silent	c.603	p.A201	0.964	pfam_K_chnl_Ca-activ_BK_bsu	pfam_K_chnl_Ca-activ_BK_bsu	-	no_errors	KCNMB4	HGNC	ENSG00000135643	tier1	-	-	26	0	0.00	39	14	26.42
KCNN1	0	genome.wustl.edu	37	19	18100628	18100628	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	18100628	18100628	G	A	SNP	KCNN1	ENST00000222249	human	ensembl	74_37	+1	known	missense	c.1274	p.R425H	1.000	pfam_CaM-bd_dom,superfamily_CaM-bd_dom	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN1	HGNC	ENSG00000105642	tier1	-	-	46	0	0.00	41	23	35.94
KCNQ2	0	genome.wustl.edu	37	20	62055548	62055548	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	62055548	62055548	G	-	DEL	KCNQ2	ENST00000354587	human	ensembl	74_37	-1	known	frame_shift_del	c.1199	p.P400fs	1.000	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ankyrin-G_BS,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ2,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ2	HGNC	ENSG00000075043	tier1			12	0	0.00	37	13	26.00
KCNQ4	0	genome.wustl.edu	37	1	41282938	41282938	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	41282938	41282938	T	-	DEL	KCNQ4	ENST00000347132	human	ensembl	74_37	+1	known	frame_shift_del	c.316	p.L107fs	1.000	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ4	HGNC	ENSG00000117013	tier1			73	0	0.00	44	61	58.10
KCNS2	0	genome.wustl.edu	37	8	99441109	99441109	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	99441109	99441109	G	A	SNP	KCNS2	ENST00000287042	human	ensembl	74_37	+1	known	missense	c.902	p.R301Q	1.000	pfam_Ion_trans_dom,prints_K_chnl	pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv2	-	no_errors	KCNS2	HGNC	ENSG00000156486	tier1	-	-	28	0	0.00	65	8	10.96
KCNT2	0	genome.wustl.edu	37	1	196392230	196392230	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	196392230	196392230	C	T	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.1135	p.E379K	1.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687	tier1	-	-	42	0	0.00	22	28	56.00
KCTD13	0	genome.wustl.edu	37	16	29918228	29918228	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	29918228	29918228	G	A	SNP	KCTD13	ENST00000308768	human	ensembl	74_37	-1	known	missense	c.955	p.R319C	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	KCTD13	HGNC	ENSG00000174943	tier1	-	-	25	0	0.00	29	6	17.14
KDELC1	0	genome.wustl.edu	37	13	103443722	103443722	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	103443722	103443722	T	-	DEL	KDELC1	ENST00000376004	human	ensembl	74_37	-1	known	frame_shift_del	c.731	p.K244fs	1.000	pfam_LipoPS_modifying,smart_LipoPS_modifying	pfam_LipoPS_modifying,pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,smart_LipoPS_modifying,pfscan_Filamin/ABP280_repeat-like	-	no_errors	KDELC1	HGNC	ENSG00000134901	tier1			65	0	0.00	31	35	53.03
KDM2A	0	genome.wustl.edu	37	11	67023823	67023823	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	67023823	67023823	A	-	DEL	KDM2A	ENST00000524657	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	KDM2A	HGNC	ENSG00000173120	tier1			8	0	0.00	9	8	47.06
KEAP1	0	genome.wustl.edu	37	19	10602788	10602788	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	10602788	10602788	C	T	SNP	KEAP1	ENST00000171111	human	ensembl	74_37	-1	known	missense	c.790	p.V264I	0.998	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KEAP1	HGNC	ENSG00000079999	tier1	-	-	37	0	0.00	62	35	36.08
KHDC3L	0	genome.wustl.edu	37	6	74073483	74073483	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	74073483	74073483	C	T	SNP	KHDC3L	ENST00000370367	human	ensembl	74_37	+1	known	missense	c.554	p.A185V	0.000	NULL	NULL	-	no_errors	KHDC3L	HGNC	ENSG00000203908	tier1	-	-	58	0	0.00	48	53	52.48
KHDRBS3	0	genome.wustl.edu	37	8	136659489	136659490	+	RNA	DEL	AA	AA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	136659489	136659490	AA	-	DEL	KHDRBS3	ENST00000518728	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	KHDRBS3	HGNC	ENSG00000131773	tier1			18	0	0.00	25	13	34.21
KHNYN	0	genome.wustl.edu	37	14	24902031	24902031	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	24902031	24902031	C	T	SNP	KHNYN	ENST00000251343	human	ensembl	74_37	+1	known	missense	c.1453	p.R485C	1.000	pfam_RNase_Zc3h12	pfam_RNase_Zc3h12	-	no_errors	KHNYN	HGNC	ENSG00000100441	tier1	rs200900567	-	32	0	0.00	43	48	52.75
KIAA0195	0	genome.wustl.edu	37	17	73487189	73487189	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	73487189	73487189	G	A	SNP	KIAA0195	ENST00000314256	human	ensembl	74_37	+1	known	silent	c.1188	p.T396	0.005	NULL	pfam_ATPase_P-typ_cation-transptr_C	-	no_errors	KIAA0195	HGNC	ENSG00000177728	tier1	-	-	58	0	0.00	55	25	31.25
KIAA0907	0	genome.wustl.edu	37	1	155903598	155903598	+	Silent	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	155903598	155903598	G	T	SNP	KIAA0907	ENST00000368321	human	ensembl	74_37	-1	known	silent	c.81	p.L27	1.000	NULL	NULL	-	no_errors	KIAA0907	HGNC	ENSG00000132680	tier1	-	-	24	0	0.00	21	17	44.74
KIAA1109	0	genome.wustl.edu	37	4	123131023	123131023	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	123131023	123131023	A	T	SNP	KIAA1109	ENST00000264501	human	ensembl	74_37	+1	known	missense	c.1982	p.D661V	1.000	NULL	pfam_Fragile_site-assoc_C	-	no_errors	KIAA1109	HGNC	ENSG00000138688	tier1	-	-	60	0	0.00	21	13	38.24
KIAA1467	0	genome.wustl.edu	37	12	13232776	13232776	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	13232776	13232776	C	T	SNP	KIAA1467	ENST00000197268	human	ensembl	74_37	+1	known	missense	c.1696	p.P566S	0.006	NULL	superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	KIAA1467	HGNC	ENSG00000084444	tier1	-	-	55	0	0.00	53	43	44.79
KIAA1468	0	genome.wustl.edu	37	18	59922664	59922664	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	59922664	59922664	C	T	SNP	KIAA1468	ENST00000256858	human	ensembl	74_37	+1	known	nonsense	c.1849	p.R617*	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_HEAT_type_2,pfscan_LisH_dimerisation	-	no_errors	KIAA1468	HGNC	ENSG00000134444	tier1	-	-	15	0	0.00	10	11	52.38
KIAA1549L	0	genome.wustl.edu	37	11	33677558	33677558	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	33677558	33677558	G	T	SNP	KIAA1549L	ENST00000389726	human	ensembl	74_37	+1	known	missense	c.4888	p.A1630S	1.000	NULL	NULL	-	no_errors	KIAA1549L	HGNC	ENSG00000110427	tier1	-	-	45	0	0.00	56	26	31.71
KIAA1841	0	genome.wustl.edu	37	2	61315639	61315640	+	RNA	DEL	TA	TA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	61315639	61315640	TA	-	DEL	KIAA1841	ENST00000482513	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	KIAA1841	HGNC	ENSG00000162929	tier1			13	0	0.00	11	6	35.29
KIAA2018	0	genome.wustl.edu	37	3	113377481	113377482	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	113377481	113377482	-	T	INS	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	frame_shift_ins	c.3048_3047	p.N1016fs	0.174:0.827	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542	tier1			25	0	0.00	27	5	15.62
KIAA2018	0	genome.wustl.edu	37	3	113377482	113377482	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	113377482	113377482	T	-	DEL	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	frame_shift_del	c.3047	p.N1016fs	0.827	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542	tier1			25	0	0.00	24	7	22.58
KIAA2018	0	genome.wustl.edu	37	3	113376116	113376116	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	113376116	113376116	C	T	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	silent	c.4413	p.Q1471	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542				29	0	0.00	25	7	21.88
KIAA2018	0	genome.wustl.edu	37	3	113376122	113376122	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	113376122	113376122	C	T	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	silent	c.4407	p.Q1469	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542				38	0	0.00	39	5	11.36
KIF20B	0	genome.wustl.edu	37	10	91518600	91518600	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	91518600	91518600	T	G	SNP	KIF20B	ENST00000416354	human	ensembl	74_37	+1	known	missense	c.4731	p.I1577M	0.320	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF20B	HGNC	ENSG00000138182	tier1	-	-	28	0	0.00	14	12	46.15
KIF5C	0	genome.wustl.edu	37	2	149854978	149854978	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	149854978	149854978	G	A	SNP	KIF5C	ENST00000435030	human	ensembl	74_37	+1	known	missense	c.2165	p.R722Q	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF5C	HGNC	ENSG00000168280	tier1	-	-	31	0	0.00	40	30	42.86
KIR2DL3	0	genome.wustl.edu	37	19	55263121	55263121	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	55263121	55263121	G	A	SNP	KIR2DL3	ENST00000342376	human	ensembl	74_37	+1	known	missense	c.736	p.V246I	0.005	NULL	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR2DL3	HGNC	ENSG00000243772				182	0	0.00	137	23	14.29
KIR2DL3	0	genome.wustl.edu	37	19	55263158	55263160	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	55263158	55263160	TCC	0	DEL	KIR2DL3	ENST00000342376	human	ensembl	74_37	+1	known	in_frame_del	c.773_775	p.L261in_frame_del	0.000:0.001:0.002	NULL	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR2DL3	HGNC	ENSG00000243772				193	0	0.00	153	12	7.27
KIR3DL2	0	genome.wustl.edu	37	19	55361941	55361941	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	55361941	55361941	C	T	SNP	KIR3DL2	ENST00000326321	human	ensembl	74_37	+1	known	missense	c.11	p.T4M	0.001	NULL	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR3DL2	HGNC	ENSG00000240403	tier1	-	-	38	0	0.00	22	67	75.28
KLF15	0	genome.wustl.edu	37	3	126071107	126071107	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	126071107	126071107	A	G	SNP	KLF15	ENST00000296233	human	ensembl	74_37	-1	known	missense	c.659	p.L220S	0.995	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF15	HGNC	ENSG00000163884	tier1	-	-	19	0	0.00	28	22	44.00
KLHDC8B	0	genome.wustl.edu	37	3	49210244	49210244	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	49210244	49210244	C	-	DEL	KLHDC8B	ENST00000332780	human	ensembl	74_37	+1	known	frame_shift_del	c.42	p.M17fs	1.000	NULL	pfam_Kelch_1,smart_Kelch_1	-	no_errors	KLHDC8B	HGNC	ENSG00000185909	tier1			39	0	0.00	45	18	28.57
KLHL20	0	genome.wustl.edu	37	1	173703092	173703092	+	Silent	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	173703092	173703092	C	A	SNP	KLHL20	ENST00000209884	human	ensembl	74_37	+1	known	silent	c.264	p.A88	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL20	HGNC	ENSG00000076321	tier1	-	-	91	0	0.00	48	51	51.52
KLHL25	0	genome.wustl.edu	37	15	86312008	86312008	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	86312008	86312008	G	A	SNP	KLHL25	ENST00000337975	human	ensembl	74_37	-1	known	missense	c.1034	p.T345M	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL25	HGNC	ENSG00000183655	tier1	-	-	50	0	0.00	15	54	78.26
KLHL30	0	genome.wustl.edu	37	2	239049639	239049639	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	239049639	239049639	G	A	SNP	KLHL30	ENST00000409223	human	ensembl	74_37	+1	known	missense	c.244	p.A82T	0.076	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL30	HGNC	ENSG00000168427	tier1	-	-	39	0	0.00	28	27	48.21
KLHL36	0	genome.wustl.edu	37	16	84695293	84695293	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	84695293	84695293	C	T	SNP	KLHL36	ENST00000564996	human	ensembl	74_37	+1	known	missense	c.1405	p.R469W	0.977	smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL36	HGNC	ENSG00000135686	tier1	-	-	28	0	0.00	26	25	49.02
KLKP1	0	genome.wustl.edu	37	19	51391542	51391543	+	RNA	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	51391542	51391543	-	T	INS	KLKP1	ENST00000600104	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.002	-	-	-	no_errors	KLKP1	HGNC	ENSG00000197588	tier1			71	0	0.00	33	42	56.00
KMT2A	0	genome.wustl.edu	37	11	118343390	118343390	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	118343390	118343390	A	G	SNP	KMT2A	ENST00000389506	human	ensembl	74_37	+1	known	missense	c.1516	p.T506A	0.903	pirsf_MeTrfase_trithorax	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	KMT2A	HGNC	ENSG00000118058	tier1	-	-	12	0	0.00	19	5	20.83
KMT2D	0	genome.wustl.edu	37	12	49420213	49420213	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	49420213	49420213	C	T	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.15536	p.R5179H	0.998	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	18	0	0.00	22	10	31.25
KMT2E	0	genome.wustl.edu	37	7	104731836	104731836	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	104731836	104731836	G	T	SNP	KMT2E	ENST00000476671	human	ensembl	74_37	+1	known	missense	c.1797	p.W599C	0.002	NULL	pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_PHD-finger	-	no_errors	KMT2E	HGNC	ENSG00000005483	tier1	-	-	85	0	0.00	157	52	24.88
KNTC1	0	genome.wustl.edu	37	12	123036051	123036051	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	123036051	123036051	G	A	SNP	KNTC1	ENST00000333479	human	ensembl	74_37	+1	known	missense	c.1177	p.E393K	1.000	NULL	pfam_RZZ-complex_KNTC1/ROD_C,superfamily_Quino_amine_DH_bsu,superfamily_WD40_repeat_dom,superfamily_PAH	-	no_errors	KNTC1	HGNC	ENSG00000184445	tier1	-	-	41	0	0.00	39	11	22.00
KRBA1	0	genome.wustl.edu	37	7	149421922	149421922	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	149421922	149421922	T	C	SNP	KRBA1	ENST00000255992	human	ensembl	74_37	+1	known	missense	c.1108	p.W370R	0.957	NULL	NULL	-	no_errors	KRBA1	HGNC	ENSG00000133619	tier1	-	-	56	0	0.00	56	24	30.00
KRT25	0	genome.wustl.edu	37	17	38911154	38911154	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	38911154	38911154	G	A	SNP	KRT25	ENST00000312150	human	ensembl	74_37	-1	known	missense	c.370	p.R124C	1.000	pfam_IF	pfam_IF,prints_Keratin_I	-	no_errors	KRT25	HGNC	ENSG00000204897	tier1	-	-	43	0	0.00	33	29	46.77
KRT35	0	genome.wustl.edu	37	17	39633867	39633867	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	39633867	39633867	G	A	SNP	KRT35	ENST00000393989	human	ensembl	74_37	-1	known	missense	c.1123	p.R375W	1.000	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT35	HGNC	ENSG00000197079	tier1	-	-	53	0	0.00	58	19	24.36
KRT42P	0	genome.wustl.edu	37	17	39785135	39785135	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	39785135	39785135	A	G	SNP	KRT42P	ENST00000438131	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KRT42P	HGNC	ENSG00000214514	tier1	-	-	114	0	0.00	125	27	17.76
KRTAP24-1	0	genome.wustl.edu	37	21	31655068	31655068	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	21	31655068	31655068	G	A	SNP	KRTAP24-1	ENST00000340345	human	ensembl	74_37	-1	known	silent	c.183	p.C61	1.000	pfam_KRTAP_PMG	pfam_KRTAP_PMG	-	no_errors	KRTAP24-1	HGNC	ENSG00000188694	tier1	-	-	38	0	0.00	15	38	70.37
KRTAP4-6	0	genome.wustl.edu	37	17	39296576	39296576	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	39296576	39296576	C	T	SNP	KRTAP4-6	ENST00000345847	human	ensembl	74_37	-1	known	missense	c.164	p.C55Y	0.926	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP4-6	HGNC	ENSG00000198090	tier1	-	-	131	0	0.00	174	53	23.35
KRTAP4-6	0	genome.wustl.edu	37	17	39296719	39296719	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	39296719	39296719	A	G	SNP	KRTAP4-6	ENST00000345847	human	ensembl	74_37	-1	known	silent	c.21	p.G7	0.750	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP4-6	HGNC	ENSG00000198090	tier1	-	-	99	0	0.00	155	48	23.65
LAMA1	0	genome.wustl.edu	37	18	6975948	6975948	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	6975948	6975948	A	G	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	silent	c.6477	p.G2159	0.001	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	14	0	0.00	15	11	42.31
LAMA4	0	genome.wustl.edu	37	6	112575076	112575077	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	112575076	112575077	GA	-	DEL	LAMA4	ENST00000368638	human	ensembl	74_37	-1	known	frame_shift_del	c.277_276	p.P93fs	0.000:0.000	NULL	NULL	-	no_errors	LAMA4	HGNC	ENSG00000112769	tier1			30	0	0.00	24	17	41.46
LAT2	0	genome.wustl.edu	37	7	73639016	73639018	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	73639016	73639018	GAG	-	DEL	LAT2	ENST00000275635	human	ensembl	74_37	+1	known	in_frame_del	c.676_678	p.E227in_frame_del	0.855:0.885:0.890	NULL	NULL	-	no_errors	LAT2	HGNC	ENSG00000086730	tier1			67	0	0.00	44	36	45.00
LDHD	0	genome.wustl.edu	37	16	75147877	75147877	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	75147877	75147877	G	A	SNP	LDHD	ENST00000300051	human	ensembl	74_37	-1	known	silent	c.885	p.P295	0.198	pfam_FAD-linked_oxidase_C,superfamily_FAD-linked_Oxase-like_C	pfam_FAD-linked_oxidase_C,pfam_Oxid_FAD_bind_N,superfamily_FAD-linked_Oxase-like_C,superfamily_FAD-bd_2	-	no_errors	LDHD	HGNC	ENSG00000166816	tier1	-	-	23	0	0.00	32	9	21.95
LDLRAP1	0	genome.wustl.edu	37	1	25889632	25889632	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	25889632	25889632	T	-	DEL	LDLRAP1	ENST00000374338	human	ensembl	74_37	+1	known	frame_shift_del	c.604	p.S202fs	0.000	NULL	pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	LDLRAP1	HGNC	ENSG00000157978	tier1			32	0	0.00	35	8	18.60
LEPREL2	0	genome.wustl.edu	37	12	6939693	6939693	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	6939693	6939693	G	-	DEL	LEPREL2	ENST00000396725	human	ensembl	74_37	+1	known	frame_shift_del	c.825	p.G277fs	0.003	NULL	smart_Pro_4_hyd_alph	-	no_errors	LEPREL2	HGNC	ENSG00000110811	tier1			26	0	0.00	62	23	27.06
LGALS9	0	genome.wustl.edu	37	17	25969367	25969367	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	25969367	25969367	G	A	SNP	LGALS9	ENST00000395473	human	ensembl	74_37	+1	known	missense	c.437	p.S146N	0.646	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	-	no_errors	LGALS9	HGNC	ENSG00000168961	tier1	-	-	78	0	0.00	90	17	15.74
LIG3	0	genome.wustl.edu	37	17	33323122	33323122	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	33323122	33323122	G	-	DEL	LIG3	ENST00000378526	human	ensembl	74_37	+1	known	frame_shift_del	c.1651	p.G552fs	1.000	pfam_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_Znf_PARP,pfam_DNA_ligase_ATP-dep_C,superfamily_NA-bd_OB-fold,superfamily_BRCT_dom,superfamily_DNA_ligase_ATP-dep_N,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_Znf_PARP,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	-	no_errors	LIG3	HGNC	ENSG00000005156	tier1			25	0	0.00	23	16	41.03
LIMK1	0	genome.wustl.edu	37	7	73497447	73497447	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	73497447	73497447	C	T	SNP	LIMK1	ENST00000418310	human	ensembl	74_37	+1	putative	missense	c.83	p.T28M	0.286	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Znf_LIM,pfam_PDZ,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,superfamily_PDZ,smart_Znf_LIM,smart_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_LIM,pfscan_PDZ,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LIMK1	HGNC	ENSG00000106683	tier1	-	-	41	0	0.00	53	20	27.40
LINC00619	0	genome.wustl.edu	37	10	44341000	44341000	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	44341000	44341000	A	G	SNP	LINC00619	ENST00000374432	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	LINC00619	HGNC	ENSG00000204187	tier1	-	-	117	0	0.00	122	30	19.74
LINC00937	0	genome.wustl.edu	37	12	8543091	8543091	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	8543091	8543091	G	A	SNP	LINC00937	ENST00000420040	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.742	-	-	-	no_errors	LINC00937	HGNC	ENSG00000226091	tier1	-	-	11	0	0.00	8	15	65.22
LINC00955	0	genome.wustl.edu	37	4	3589709	3589709	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	3589709	3589709	G	T	SNP	LINC00955	ENST00000514422	human	ensembl	74_37	+1	novel	missense	c.77	p.W26L	0.279	NULL	NULL	-	no_errors	LINC00955	HGNC	ENSG00000216560	tier1	-	-	100	0	0.00	120	50	29.41
LMNB2	0	genome.wustl.edu	37	19	2432415	2432415	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	2432415	2432415	G	A	SNP	LMNB2	ENST00000325327	human	ensembl	74_37	-1	known	missense	c.1589	p.T530M	1.000	pfam_Lamin_tail_dom	pfam_IF,pfam_Lamin_tail_dom,superfamily_Prefoldin	-	no_errors	LMNB2	HGNC	ENSG00000176619	tier1	-	-	66	0	0.00	21	62	74.70
LMO3	0	genome.wustl.edu	37	12	16713448	16713448	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	16713448	16713448	G	A	SNP	LMO3	ENST00000453727	human	ensembl	74_37	-1	known	missense	c.172	p.R58C	1.000	pfam_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LMO3	HGNC	ENSG00000048540	tier1	rs149014326	-	14	0	0.00	24	6	20.00
LMO7	0	genome.wustl.edu	37	13	76374862	76374862	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	76374862	76374862	A	C	SNP	LMO7	ENST00000357063	human	ensembl	74_37	+1	known	missense	c.661	p.S221R	1.000	NULL	pfam_CH-domain,pfam_PDZ,superfamily_CH-domain,superfamily_PDZ,smart_CH-domain,smart_PDZ,pfscan_CH-domain,pfscan_PDZ,prints_SM22_calponin	-	no_errors	LMO7	HGNC	ENSG00000136153	tier1	-	-	62	0	0.00	40	16	28.57
LOC100128946	0	genome.wustl.edu	37	22	49290904	49290904	+	RNA	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	49290904	49290904	G	-	DEL	LOC100128946	ENST00000380981	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	WI2-81516E3.1	Clone_based_vega_gene	ENSG00000205632	tier1			38	0	0.00	33	19	36.54
LOC100131825	0	genome.wustl.edu	37	1	159166116	159166116	+	RNA	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	159166116	159166116	T	C	SNP	LOC100131825	ENST00000415675	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTA-134P22.2	Clone_based_vega_gene	ENSG00000225670	tier1	-	-	41	0	0.00	58	11	15.94
LOC100132891	0	genome.wustl.edu	37	8	72965086	72965086	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	72965086	72965086	C	T	SNP	LOC100132891	ENST00000457356	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-383H13.1	Clone_based_vega_gene	ENSG00000235531	tier1	-	-	9	0	0.00	4	15	78.95
LOC100134368	0	genome.wustl.edu	37	16	436727	436729	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	436727	436729	AAA	-	DEL	LOC100134368	ENST00000457760	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004:0.019:0.056	-	-	-	no_errors	Z97634.3	Clone_based_vega_gene	ENSG00000236829	tier1			8	0	0.00	7	3	30.00
LOC101927345	0	genome.wustl.edu	37	1	143399710	143399710	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	143399710	143399710	T	0	DEL	LOC101927345	ENST00000431700	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261				9	0	0.00	4	3	42.86
LOC101927599	0	genome.wustl.edu	37	19	37068397	37068397	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	37068397	37068397	T	-	DEL	LOC101927599	ENST00000448373	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.124	-	-	-	no_errors	AC092295.7	Clone_based_vega_gene	ENSG00000233527	tier1			21	0	0.00	9	5	35.71
LOC101930187	0	genome.wustl.edu	37	7	153755694	153755694	+	RNA	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	153755694	153755694	C	-	DEL	LOC101930187	ENST00000425591	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC006019.3	Clone_based_vega_gene	ENSG00000203335	tier1			13	0	0.00	5	8	61.54
LOC101930257	0	genome.wustl.edu	37	2	243056848	243056848	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	243056848	243056848	A	-	DEL	LOC101930257	ENST00000431796	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	AC093642.5	Clone_based_vega_gene	ENSG00000220804	tier1			41	0	0.00	30	14	31.82
LOC101930284	0	genome.wustl.edu	37	1	143230391	143230391	+	RNA	SNP	A	A	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	143230391	143230391	A	T	SNP	LOC101930284	ENST00000422716	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.080	-	-	-	no_errors	RP11-782C8.5	Clone_based_vega_gene	ENSG00000225278	tier1	-	-	68	0	0.00	56	6	9.68
LOC101930578	0	genome.wustl.edu	37	13	52854009	52854009	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	52854009	52854009	C	T	SNP	LOC101930578	ENST00000451298	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RP11-248G5.8	Clone_based_vega_gene	ENSG00000217576	tier1	-	-	72	0	0.00	62	18	22.22
LOC643770	0	genome.wustl.edu	37	12	98880902	98880904	+	In_Frame_Del	DEL	AAA	AAA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	98880902	98880904	AAA	-	DEL	LOC643770	ENST00000501499	human	ensembl	74_37	-1	putative	in_frame_del	c.222_220	p.F74in_frame_del	0.250:0.230:0.199	NULL	NULL	-	no_errors	RP11-181C3.1	Clone_based_vega_gene	ENSG00000245017	tier1			62	0	0.00	47	30	38.96
LOC728730	0	genome.wustl.edu	37	2	39892291	39892291	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	39892291	39892291	C	T	SNP	LOC728730	ENST00000415640	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC007246.3	Clone_based_vega_gene	ENSG00000231312	tier1	-	-	31	0	0.00	34	34	50.00
LONP2	0	genome.wustl.edu	37	16	48295365	48295365	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	48295365	48295365	A	G	SNP	LONP2	ENST00000285737	human	ensembl	74_37	+1	known	missense	c.754	p.T252A	0.003	tigrfam_Lon_bac/euk-typ	pfam_Pept_S16_C,pfam_Pept_S16_N,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_P-loop_NTPase,superfamily_PUA-like_domain,smart_Pept_S16_N,smart_AAA+_ATPase,tigrfam_Lon_bac/euk-typ	-	no_errors	LONP2	HGNC	ENSG00000102910	tier1	-	-	38	0	0.00	36	28	43.75
LPA	0	genome.wustl.edu	37	6	160958928	160958928	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	160958928	160958928	G	T	SNP	LPA	ENST00000316300	human	ensembl	74_37	-1	known	missense	c.5801	p.A1934D	0.009	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Kringle,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	LPA	HGNC	ENSG00000198670	tier1	-	-	91	0	0.00	40	25	38.46
LRFN5	0	genome.wustl.edu	37	14	42356300	42356300	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	42356300	42356300	A	G	SNP	LRFN5	ENST00000298119	human	ensembl	74_37	+1	known	missense	c.472	p.N158D	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN5	HGNC	ENSG00000165379	tier1	-	-	32	0	0.00	52	19	26.76
LRG1	0	genome.wustl.edu	37	19	4537971	4537971	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	4537971	4537971	G	T	SNP	LRG1	ENST00000306390	human	ensembl	74_37	-1	known	missense	c.1025	p.A342E	0.000	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRG1	HGNC	ENSG00000171236				20	0	0.00	28	4	12.50
LRIG3	0	genome.wustl.edu	37	12	59270334	59270334	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	59270334	59270334	G	A	SNP	LRIG3	ENST00000320743	human	ensembl	74_37	-1	known	missense	c.2588	p.T863M	0.999	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG3	HGNC	ENSG00000139263	tier1	-	-	35	0	0.00	43	11	20.37
LRP1	0	genome.wustl.edu	37	12	57579515	57579515	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	57579515	57579515	C	T	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	missense	c.6665	p.A2222V	1.000	NULL	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	tier1	-	-	36	0	0.00	33	19	36.54
LRP1	0	genome.wustl.edu	37	12	57603939	57603940	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	57603939	57603940	-	C	INS	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	frame_shift_ins	c.12567_12568	p.D4192fs	0.037:0.113	superfamily_Growth_fac_rcpt_N_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	tier1			44	0	0.00	77	27	25.96
LRP1B	0	genome.wustl.edu	37	2	141751679	141751679	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	141751679	141751679	G	T	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.2529	p.H843Q	0.023	superfamily_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	52	0	0.00	70	4	5.41
LRR1	0	genome.wustl.edu	37	14	50067360	50067360	+	RNA	SNP	T	T	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	50067360	50067360	T	G	SNP	LRR1	ENST00000557531	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.119	-	-	-	no_errors	LRR1	HGNC	ENSG00000165501	tier1	-	-	40	0	0.00	89	7	7.29
LRRC16A	0	genome.wustl.edu	37	6	25435803	25435803	+	Silent	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	25435803	25435803	G	T	SNP	LRRC16A	ENST00000329474	human	ensembl	74_37	+1	novel	silent	c.342	p.L114	0.968	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16A	HGNC	ENSG00000079691	tier1	-	-	24	0	0.00	14	3	17.65
LRRC16A	0	genome.wustl.edu	37	6	25452454	25452455	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	25452454	25452455	TT	-	DEL	LRRC16A	ENST00000461945	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	LRRC16A	HGNC	ENSG00000079691	tier1			41	0	0.00	21	6	22.22
LRRC16A	0	genome.wustl.edu	37	6	25495432	25495432	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	25495432	25495432	T	C	SNP	LRRC16A	ENST00000329474	human	ensembl	74_37	+1	novel	silent	c.1314	p.P438	0.486	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16A	HGNC	ENSG00000079691	tier1	-	-	35	0	0.00	20	6	23.08
LRRC32	0	genome.wustl.edu	37	11	76371703	76371703	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	76371703	76371703	G	A	SNP	LRRC32	ENST00000260061	human	ensembl	74_37	-1	known	missense	c.934	p.R312C	0.000	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC32	HGNC	ENSG00000137507	tier1	rs143082901	-	33	0	0.00	41	32	43.84
LRRC63	0	genome.wustl.edu	37	13	46840913	46840913	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	46840913	46840913	C	-	DEL	LRRC63	ENST00000446175	human	ensembl	74_37	+1	known	frame_shift_del	c.1356	p.H454fs	0.118	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC63	HGNC	ENSG00000173988	tier1			40	0	0.00	28	14	33.33
LRRK1	0	genome.wustl.edu	37	15	101549153	101549153	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	101549153	101549153	A	G	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	missense	c.874	p.T292A	0.739	smart_Leu-rich_rpt_typical-subtyp	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237	tier1	-	-	24	0	0.00	15	43	74.14
LRRK2	0	genome.wustl.edu	37	12	40699629	40699629	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	40699629	40699629	G	A	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	missense	c.3820	p.D1274N	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1	-	-	46	0	0.00	29	19	39.58
LRRTM1	0	genome.wustl.edu	37	2	80530816	80530816	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	80530816	80530816	G	A	SNP	LRRTM1	ENST00000295057	human	ensembl	74_37	-1	known	silent	c.129	p.C43	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM1	HGNC	ENSG00000162951	tier1	-	-	11	0	0.00	23	6	20.69
LYPD6B	0	genome.wustl.edu	37	2	150071273	150071273	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	150071273	150071273	A	-	DEL	LYPD6B	ENST00000498249	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LYPD6B	HGNC	ENSG00000150556	tier1			24	0	0.00	26	17	39.53
LZTR1	0	genome.wustl.edu	37	22	21347194	21347194	+	Splice_Site	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	21347194	21347194	G	A	SNP	LZTR1	ENST00000215739	human	ensembl	74_37	+1	known	splice_site	c.1260+1	e11+1	1.000	-	-	-	no_errors	LZTR1	HGNC	ENSG00000099949	tier1	-	-	25	0	0.00	36	27	42.86
MACF1	0	genome.wustl.edu	37	1	39789902	39789902	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	39789902	39789902	A	G	SNP	MACF1	ENST00000317713	human	ensembl	74_37	+1	known	missense	c.4289	p.K1430R	1.000	smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1	-	-	43	0	0.00	29	15	34.09
MACF1	0	genome.wustl.edu	37	1	39951743	39951743	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	39951743	39951743	A	-	DEL	MACF1	ENST00000496360	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.084	-	-	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1			35	0	0.00	18	21	53.85
MACF1	0	genome.wustl.edu	37	1	39951776	39951776	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	39951776	39951776	G	A	SNP	MACF1	ENST00000496360	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.939	-	-	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1	-	-	35	0	0.00	39	7	15.22
MADCAM1	0	genome.wustl.edu	37	19	504772	504772	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	504772	504772	C	T	SNP	MADCAM1	ENST00000215637	human	ensembl	74_37	+1	known	missense	c.956	p.P319L	0.004	NULL	pfam_Adhes-Ig-like,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	MADCAM1	HGNC	ENSG00000099866	tier1	-	-	31	0	0.00	34	38	52.78
MAEA	0	genome.wustl.edu	37	4	1332301	1332301	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	1332301	1332301	G	A	SNP	MAEA	ENST00000303400	human	ensembl	74_37	+1	known	missense	c.991	p.A331T	1.000	NULL	smart_LisH_dimerisation,smart_CTLH_C,smart_CRA_dom,pfscan_LisH_dimerisation,pfscan_CTLH_C	-	no_errors	MAEA	HGNC	ENSG00000090316	tier1	-	-	50	0	0.00	64	54	45.76
MAGED1	0	genome.wustl.edu	37	X	51639754	51639754	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	51639754	51639754	C	T	SNP	MAGED1	ENST00000375695	human	ensembl	74_37	+1	known	missense	c.1171	p.P391S	0.934	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGED1	HGNC	ENSG00000179222	tier1	-	-	35	0	0.00	15	41	73.21
MAOB	0	genome.wustl.edu	37	X	43741511	43741511	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	43741511	43741511	C	-	DEL	MAOB	ENST00000378069	human	ensembl	74_37	-1	known	frame_shift_del	c.35	p.G12fs	1.000	pfam_FAD-dep_OxRdtase,pfam_FAD_bind_dom,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_mOase_FAD-bd,prints_Flavin_amine_oxidase	pfam_Amino_oxidase,pfam_FAD-dep_OxRdtase,pfam_FAD_bind_dom,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_mOase_FAD-bd,prints_Flavin_amine_oxidase	-	no_errors	MAOB	HGNC	ENSG00000069535	tier1			25	0	0.00	8	21	72.41
MAP1A	0	genome.wustl.edu	37	15	43817459	43817459	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	43817459	43817459	C	T	SNP	MAP1A	ENST00000399453	human	ensembl	74_37	+1	known	missense	c.3788	p.A1263V	0.000	NULL	NULL	-	no_errors	MAP1A	HGNC	ENSG00000166963	tier1	-	-	17	0	0.00	8	25	75.76
MAP2	0	genome.wustl.edu	37	2	210561667	210561667	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	210561667	210561667	A	-	DEL	MAP2	ENST00000360351	human	ensembl	74_37	+1	known	frame_shift_del	c.4414	p.T1474fs	1.000	pfam_MAP2_projctn	pfam_MAP2_projctn,pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC	ENSG00000078018	tier1			27	0	0.00	43	5	10.42
MAP2K1	0	genome.wustl.edu	37	15	66777404	66777404	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	66777404	66777404	C	T	SNP	MAP2K1	ENST00000307102	human	ensembl	74_37	+1	known	missense	c.770	p.A257V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP2K1	HGNC	ENSG00000169032	tier1	-	-	43	0	0.00	12	52	81.25
MAP3K11	0	genome.wustl.edu	37	11	65374944	65374944	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	65374944	65374944	C	T	SNP	MAP3K11	ENST00000309100	human	ensembl	74_37	-1	known	missense	c.1286	p.R429H	0.998	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MAP3K11	HGNC	ENSG00000173327				10	0	0.00	54	6	10.00
MAP3K19	0	genome.wustl.edu	37	2	135763096	135763096	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	135763096	135763096	G	A	SNP	MAP3K19	ENST00000375845	human	ensembl	74_37	-1	known	silent	c.144	p.F48	0.993	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K19	HGNC	ENSG00000176601	tier1	-	-	54	0	0.00	45	36	44.44
MAP3K4	0	genome.wustl.edu	37	6	161455391	161455391	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	161455391	161455391	C	-	DEL	MAP3K4	ENST00000392142	human	ensembl	74_37	+1	known	frame_shift_del	c.253	p.S87fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K4	HGNC	ENSG00000085511	tier1			44	0	0.00	39	17	30.36
MAP4K4	0	genome.wustl.edu	37	2	102456423	102456423	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	102456423	102456423	A	G	SNP	MAP4K4	ENST00000324219	human	ensembl	74_37	+1	known	missense	c.916	p.I306V	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	MAP4K4	HGNC	ENSG00000071054	tier1	-	-	42	0	0.00	35	23	39.66
MAP7D1	0	genome.wustl.edu	37	1	36642154	36642154	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	36642154	36642154	C	T	SNP	MAP7D1	ENST00000373151	human	ensembl	74_37	+1	known	missense	c.1205	p.P402L	0.000	NULL	pfam_MAP7	-	no_errors	MAP7D1	HGNC	ENSG00000116871	tier1	-	-	22	0	0.00	10	18	64.29
MAP9	0	genome.wustl.edu	37	4	156281335	156281335	+	Silent	SNP	T	T	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	156281335	156281335	T	G	SNP	MAP9	ENST00000311277	human	ensembl	74_37	-1	known	silent	c.1035	p.A345	0.082	NULL	NULL	-	no_errors	MAP9	HGNC	ENSG00000164114	tier1	-	-	62	0	0.00	33	14	29.79
MARCH4	0	genome.wustl.edu	37	2	217234779	217234779	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	217234779	217234779	G	-	DEL	MARCH4	ENST00000273067	human	ensembl	74_37	-1	known	frame_shift_del	c.205	p.Q69fs	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH4	HGNC	ENSG00000144583	tier1			18	0	0.00	17	16	48.48
MARCO	0	genome.wustl.edu	37	2	119739053	119739053	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	119739053	119739053	A	G	SNP	MARCO	ENST00000327097	human	ensembl	74_37	+1	known	missense	c.835	p.K279E	0.851	NULL	pfam_Collagen,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	MARCO	HGNC	ENSG00000019169	tier1	-	-	20	0	0.00	29	6	17.14
MAST2	0	genome.wustl.edu	37	1	46499903	46499903	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	46499903	46499903	A	G	SNP	MAST2	ENST00000361297	human	ensembl	74_37	+1	known	missense	c.3833	p.Q1278R	1.000	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST2	HGNC	ENSG00000086015	tier1	-	-	24	0	0.00	16	4	20.00
MAST2	0	genome.wustl.edu	37	1	46501229	46501229	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	46501229	46501229	C	A	SNP	MAST2	ENST00000361297	human	ensembl	74_37	+1	known	missense	c.4888	p.L1630I	1.000	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST2	HGNC	ENSG00000086015	tier1	-	-	22	0	0.00	25	6	18.75
MAVS	0	genome.wustl.edu	37	20	3845276	3845276	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	3845276	3845276	T	C	SNP	MAVS	ENST00000428216	human	ensembl	74_37	+1	known	silent	c.999	p.P333	0.203	NULL	NULL	-	no_errors	MAVS	HGNC	ENSG00000088888	tier1	-	-	29	0	0.00	46	23	32.86
MAZ	0	genome.wustl.edu	37	16	29821568	29821568	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	29821568	29821568	C	T	SNP	MAZ	ENST00000563402	human	ensembl	74_37	+1	novel	missense	c.419	p.A140V	0.133	NULL	NULL	-	no_errors	MAZ	HGNC	ENSG00000103495	tier1	-	-	27	0	0.00	13	5	27.78
MBD1	0	genome.wustl.edu	37	18	47802303	47802304	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	47802303	47802304	CA	-	DEL	MBD1	ENST00000424334	human	ensembl	74_37	-1	known	frame_shift_del	c.643_642	p.C214fs	1.000:0.747	pfam_Znf_CXXC,pfscan_Znf_CXXC	pfam_Znf_CXXC,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_CXXC	-	no_errors	MBD1	HGNC	ENSG00000141644	tier1			21	0	0.00	41	7	14.58
MBIP	0	genome.wustl.edu	37	14	36770037	36770037	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	36770037	36770037	A	-	DEL	MBIP	ENST00000604154	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.241	-	-	-	no_errors	MBIP	HGNC	ENSG00000151332	tier1			28	0	0.00	21	12	36.36
MCTP2	0	genome.wustl.edu	37	15	94858854	94858854	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	94858854	94858854	C	T	SNP	MCTP2	ENST00000357742	human	ensembl	74_37	+1	known	nonsense	c.625	p.R209*	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_PRibTrfase_C,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	MCTP2	HGNC	ENSG00000140563	tier1	rs200389318	-	90	0	0.00	52	113	68.48
MDGA1	0	genome.wustl.edu	37	6	37619877	37619877	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	37619877	37619877	T	C	SNP	MDGA1	ENST00000297153	human	ensembl	74_37	-1	known	missense	c.1222	p.S408G	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA1	HGNC	ENSG00000112139				38	0	0.00	25	9	26.47
MDGA2	0	genome.wustl.edu	37	14	47530771	47530771	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	47530771	47530771	T	-	DEL	MDGA2	ENST00000439988	human	ensembl	74_37	-1	known	frame_shift_del	c.1206	p.G403fs	1.000	NULL	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA2	Uniprot_gn	ENSG00000272781	tier1			16	0	0.00	19	5	20.83
MDM2	0	genome.wustl.edu	37	12	69233090	69233090	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	69233090	69233090	C	-	DEL	MDM2	ENST00000462284	human	ensembl	74_37	+1	known	frame_shift_del	c.955	p.L321fs	1.000	pfam_Znf_RanBP2,pirsf_p53_neg-reg_MDM_2/4,pfscan_Znf_RanBP2	pfam_SWIB_MDM2_domain,pfam_Znf_RanBP2,superfamily_SWIB_MDM2_domain,pirsf_p53_neg-reg_MDM_2/4,pfscan_Znf_RanBP2,pfscan_Znf_RING	-	no_errors	MDM2	HGNC	ENSG00000135679	tier1			23	0	0.00	28	7	20.00
MED13L	0	genome.wustl.edu	37	12	116418612	116418612	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	116418612	116418612	T	C	SNP	MED13L	ENST00000281928	human	ensembl	74_37	-1	known	silent	c.5307	p.K1769	1.000	pfam_Mediator_Med13	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13L	HGNC	ENSG00000123066	tier1	-	-	35	0	0.00	20	23	53.49
MED16	0	genome.wustl.edu	37	19	875405	875405	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	875405	875405	G	A	SNP	MED16	ENST00000325464	human	ensembl	74_37	-1	known	missense	c.1610	p.S537L	0.998	pfam_Mediator_Med16	pfam_Mediator_Med16,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MED16	HGNC	ENSG00000175221				31	0	0.00	73	4	5.19
MED17	0	genome.wustl.edu	37	11	93521196	93521196	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	93521196	93521196	C	T	SNP	MED17	ENST00000251871	human	ensembl	74_37	+1	known	missense	c.280	p.P94S	1.000	pfam_Mediator_Med17	pfam_Mediator_Med17	-	no_errors	MED17	HGNC	ENSG00000042429	tier1	-	-	57	0	0.00	30	20	40.00
MEGF6	0	genome.wustl.edu	37	1	3519090	3519090	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	3519090	3519090	G	A	SNP	MEGF6	ENST00000356575	human	ensembl	74_37	-1	known	missense	c.206	p.T69M	0.051	pfscan_EMI_domain	pfam_EGF_laminin,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF6	HGNC	ENSG00000162591	tier1	-	-	84	0	0.00	79	24	23.30
MEOX2	0	genome.wustl.edu	37	7	15652021	15652021	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	15652021	15652021	C	T	SNP	MEOX2	ENST00000262041	human	ensembl	74_37	-1	known	silent	c.906	p.A302	0.311	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	MEOX2	HGNC	ENSG00000106511	tier1	-	-	63	0	0.00	96	8	7.55
MET	0	genome.wustl.edu	37	7	116340117	116340117	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	116340117	116340117	G	A	SNP	MET	ENST00000318493	human	ensembl	74_37	+1	known	missense	c.979	p.A327T	1.000	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Kinase-like_dom,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Semap_dom,pfscan_Prot_kinase_dom	-	no_errors	MET	HGNC	ENSG00000105976	tier1	-	-	41	0	0.00	38	23	37.10
METTL3	0	genome.wustl.edu	37	14	21969886	21969886	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	21969886	21969886	G	A	SNP	METTL3	ENST00000298717	human	ensembl	74_37	-1	known	missense	c.883	p.R295C	1.000	NULL	pfam_MT-A70-like,pfscan_MT-A70-like	-	no_errors	METTL3	HGNC	ENSG00000165819	tier1	-	-	64	0	0.00	102	25	19.69
MICAL3	0	genome.wustl.edu	37	22	18376579	18376579	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	18376579	18376579	C	T	SNP	MICAL3	ENST00000441493	human	ensembl	74_37	-1	known	missense	c.1541	p.R514H	0.992	superfamily_CH-domain	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,prints_Rng_hydrolase-like	-	no_errors	MICAL3	HGNC	ENSG00000243156	tier1	-	-	18	0	0.00	21	5	19.23
MIR133A1	0	genome.wustl.edu	37	18	19408831	19408832	+	RNA	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	19408831	19408832	-	T	INS	MIR133A1	ENST00000581072	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MIR133A1	HGNC	ENSG00000265142	tier1			17	0	0.00	13	4	23.53
MIR133A1	0	genome.wustl.edu	37	18	19408832	19408832	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	19408832	19408832	T	-	DEL	MIR133A1	ENST00000581072	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR133A1	HGNC	ENSG00000265142	tier1			17	0	0.00	10	7	41.18
MIR3118-2	0	genome.wustl.edu	37	1	143163772	143163772	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	143163772	143163772	G	A	SNP	MIR3118-2	ENST00000582397	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.121	-	-	-	no_errors	MIR3118-2	HGNC	ENSG00000265661				82	0	0.00	91	36	25.90
MIR3147	0	genome.wustl.edu	37	7	57472766	57472766	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	57472766	57472766	G	A	SNP	MIR3147	ENST00000577811	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	MIR3147	HGNC	ENSG00000266168	tier1	-	-	40	0	0.00	54	20	27.03
MIR3193	0	genome.wustl.edu	37	20	30194999	30194999	+	RNA	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	30194999	30194999	G	T	SNP	MIR3193	ENST00000578262	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	MIR3193	HGNC	ENSG00000264395				38	0	0.00	66	4	5.71
MIR3657	0	genome.wustl.edu	37	12	112475449	112475451	+	RNA	DEL	ACA	ACA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	ACA	ACA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	112475449	112475451	ACA	-	DEL	MIR3657	ENST00000584818	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.057:0.065:0.071	-	-	-	no_errors	MIR3657	HGNC	ENSG00000266370	tier1			27	0	0.00	28	13	31.71
MIR3916	0	genome.wustl.edu	37	1	247365176	247365176	+	RNA	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	247365176	247365176	G	-	DEL	MIR3916	ENST00000606212	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR3916	HGNC	ENSG00000227671	tier1			13	0	0.00	8	7	46.67
MIR4435-1HG	0	genome.wustl.edu	37	2	112252464	112252464	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	112252464	112252464	G	A	SNP	MIR4435-1HG	ENST00000308604	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR4435-1HG	HGNC	ENSG00000172965				49	0	0.00	106	6	5.36
MIR4800	0	genome.wustl.edu	37	4	2251851	2251854	+	RNA	DEL	CCTT	CCTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CCTT	CCTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	2251851	2251854	CCTT	-	DEL	MIR4800	ENST00000537353	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.898:0.972:0.995:0.998	-	-	-	no_errors	MIR4800	HGNC	ENSG00000265080	tier1			50	0	0.00	54	32	37.21
MIR567	0	genome.wustl.edu	37	3	111831724	111831725	+	RNA	DEL	AA	AA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	111831724	111831725	AA	-	DEL	MIR567	ENST00000385205	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MIR567	HGNC	ENSG00000207940	tier1			32	0	0.00	22	4	15.38
MIR631	0	genome.wustl.edu	37	15	75645967	75645967	+	RNA	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	75645967	75645967	T	C	SNP	MIR631	ENST00000384904	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	MIR631	HGNC	ENSG00000207636				9	0	0.00	7	4	36.36
MIR644A	0	genome.wustl.edu	37	20	33054129	33054130	+	RNA	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	33054129	33054130	-	T	INS	MIR644A	ENST00000385262	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.024:0.030	-	-	-	no_errors	MIR644A	HGNC	ENSG00000207997	tier1			57	0	0.00	62	16	20.51
MIR874	0	genome.wustl.edu	37	5	136983320	136983320	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	136983320	136983320	C	T	SNP	MIR874	ENST00000401190	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR874	HGNC	ENSG00000216009	tier1	-	-	27	0	0.00	30	32	51.61
MIS18BP1	0	genome.wustl.edu	37	14	45693722	45693722	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	45693722	45693722	T	-	DEL	MIS18BP1	ENST00000310806	human	ensembl	74_37	-1	known	frame_shift_del	c.2068	p.S690fs	0.797	NULL	pfam_SANTA,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MIS18BP1	HGNC	ENSG00000129534	tier1			43	0	0.00	48	32	40.00
MIS18BP1	0	genome.wustl.edu	37	14	45716019	45716019	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	45716019	45716019	T	0	DEL	MIS18BP1	ENST00000310806	human	ensembl	74_37	-1	known	frame_shift_del	c.471	p.K157fs	0.001	NULL	pfam_SANTA,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MIS18BP1	HGNC	ENSG00000129534				116	0	0.00	198	27	12.00
MKL2	0	genome.wustl.edu	37	16	14351991	14351991	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	14351991	14351991	C	G	SNP	MKL2	ENST00000341243	human	ensembl	74_37	+1	known	missense	c.2704	p.L902V	1.000	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL2	HGNC	ENSG00000186260	tier1	-	-	37	0	0.00	32	8	20.00
MMP9	0	genome.wustl.edu	37	20	44639804	44639804	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	44639804	44639804	C	T	SNP	MMP9	ENST00000372330	human	ensembl	74_37	+1	known	silent	c.672	p.N224	1.000	pfam_Pept_M10_metallopeptidase,superfamily_Kringle-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_PT,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP9	HGNC	ENSG00000100985	tier1	-	-	38	0	0.00	56	34	37.78
MORF4L1	0	genome.wustl.edu	37	15	79189830	79189830	+	RNA	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	79189830	79189830	G	T	SNP	MORF4L1	ENST00000561171	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MORF4L1	HGNC	ENSG00000185787	tier1	-	-	64	0	0.00	72	20	21.74
MOV10	0	genome.wustl.edu	37	1	113239426	113239426	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	113239426	113239426	G	A	SNP	MOV10	ENST00000357443	human	ensembl	74_37	+1	known	missense	c.2156	p.G719D	0.992	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	MOV10	HGNC	ENSG00000155363	tier1	-	-	35	0	0.00	30	12	28.57
MPP2	0	genome.wustl.edu	37	17	41958085	41958085	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	41958085	41958085	G	A	SNP	MPP2	ENST00000461854	human	ensembl	74_37	-1	known	missense	c.1196	p.P399L	0.984	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_GK/Ca_channel_bsu,pfam_L27_C,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	MPP2	HGNC	ENSG00000108852	tier1	-	-	28	0	0.00	26	9	25.71
MPZL1	0	genome.wustl.edu	37	1	167734970	167734970	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	167734970	167734970	C	G	SNP	MPZL1	ENST00000359523	human	ensembl	74_37	+1	known	missense	c.242	p.A81G	0.105	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom,prints_Myelin_P0	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom,prints_Myelin_P0	-	no_errors	MPZL1	HGNC	ENSG00000197965	tier1	-	-	32	0	0.00	31	7	18.42
MROH1	0	genome.wustl.edu	37	8	145267982	145267982	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	145267982	145267982	G	A	SNP	MROH1	ENST00000423230	human	ensembl	74_37	+1	known	silent	c.1227	p.P409	0.000	NULL	superfamily_ARM-type_fold	-	no_errors	MROH1	HGNC	ENSG00000179832	tier1	-	-	35	0	0.00	92	10	9.80
MROH2A	0	genome.wustl.edu	37	2	234704629	234704629	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	234704629	234704629	C	T	SNP	MROH2A	ENST00000389758	human	ensembl	74_37	+1	novel	missense	c.1076	p.P359L	0.986	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH2A	HGNC	ENSG00000185038	tier1	-	-	44	0	0.00	33	37	52.86
MRPL10	0	genome.wustl.edu	37	17	45906019	45906019	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	45906019	45906019	G	T	SNP	MRPL10	ENST00000351111	human	ensembl	74_37	-1	known	missense	c.70	p.Q24K	1.000	NULL	pfam_Ribosomal_L10/acidic_P0	-	no_errors	MRPL10	HGNC	ENSG00000159111	tier1	-	-	31	0	0.00	49	4	7.55
MRPL9	0	genome.wustl.edu	37	1	151735572	151735573	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	151735572	151735573	-	C	INS	MRPL9	ENST00000368830	human	ensembl	74_37	-1	known	frame_shift_ins	c.204_203	p.R69fs	1.000:1.000	NULL	pfam_Ribosomal_L9_N,superfamily_Ribosomal_L9/RNase_H1_N	-	no_errors	MRPL9	HGNC	ENSG00000143436	tier1			17	0	0.00	27	4	12.90
MS4A6A	0	genome.wustl.edu	37	11	59947419	59947419	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	59947419	59947419	C	G	SNP	MS4A6A	ENST00000323961	human	ensembl	74_37	-1	known	missense	c.167	p.G56A	0.002	pfam_CD20-like,superfamily_MFS_dom_general_subst_transpt	pfam_CD20-like,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MS4A6A	HGNC	ENSG00000110077	tier1	-	-	45	0	0.00	31	22	41.51
MS4A6A	0	genome.wustl.edu	37	11	59947431	59947431	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	59947431	59947431	T	C	SNP	MS4A6A	ENST00000323961	human	ensembl	74_37	-1	known	missense	c.155	p.Q52R	1.000	pfam_CD20-like,superfamily_MFS_dom_general_subst_transpt	pfam_CD20-like,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MS4A6A	HGNC	ENSG00000110077	tier1	-	-	46	0	0.00	29	20	40.82
MST1	0	genome.wustl.edu	37	3	49721799	49721799	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	49721799	49721799	C	T	SNP	MST1	ENST00000449682	human	ensembl	74_37	-1	known	missense	c.1964	p.R655Q	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	MST1	HGNC	ENSG00000173531	tier1	-	-	25	0	0.00	4	20	83.33
MTA3	0	genome.wustl.edu	37	2	42936305	42936306	+	RNA	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	42936305	42936306	-	T	INS	MTA3	ENST00000475383	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010:0.005	-	-	-	no_errors	MTA3	HGNC	ENSG00000057935	tier1			56	0	0.00	69	20	22.47
MTERFD2	0	genome.wustl.edu	37	2	242035595	242035595	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	242035595	242035595	G	A	SNP	MTERFD2	ENST00000241527	human	ensembl	74_37	-1	known	missense	c.964	p.R322W	0.999	NULL	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	-	no_errors	MTERFD2	HGNC	ENSG00000122085	tier1	-	-	79	0	0.00	67	46	40.71
MTF2	0	genome.wustl.edu	37	1	93602676	93602678	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	93602676	93602678	AAA	-	DEL	MTF2	ENST00000467953	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:0.997:0.993	-	-	-	no_errors	MTF2	HGNC	ENSG00000143033	tier1			34	0	0.00	44	11	20.00
MTHFD2	0	genome.wustl.edu	37	2	74437167	74437167	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	74437167	74437167	C	T	SNP	MTHFD2	ENST00000394053	human	ensembl	74_37	+1	known	missense	c.661	p.R221C	0.994	pfam_THF_DH/CycHdrlase_NAD-bd_dom	pfam_THF_DH/CycHdrlase_NAD-bd_dom,pfam_THF_DH/CycHdrlase_cat_dom,prints_THF_DH/CycHdrlase	-	no_errors	MTHFD2	HGNC	ENSG00000065911	tier1	-	-	55	0	0.00	50	21	29.58
MTHFSD	0	genome.wustl.edu	37	16	86585831	86585831	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	86585831	86585831	A	G	SNP	MTHFSD	ENST00000381214	human	ensembl	74_37	-1	known	missense	c.191	p.V64A	0.996	pfam_FTHF_cligase	pfam_FTHF_cligase,pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	MTHFSD	HGNC	ENSG00000103248	tier1	-	-	20	0	0.00	31	15	32.61
MTL5	0	genome.wustl.edu	37	11	68517736	68517736	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	68517736	68517736	C	T	SNP	MTL5	ENST00000255087	human	ensembl	74_37	-1	known	silent	c.393	p.A131	0.015	NULL	pfam_CRC,superfamily_Thionin	-	no_errors	MTL5	HGNC	ENSG00000132749	tier1	-	-	28	0	0.00	65	15	18.75
MTMR7	0	genome.wustl.edu	37	8	17161980	17161980	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	17161980	17161980	C	T	SNP	MTMR7	ENST00000180173	human	ensembl	74_37	-1	known	silent	c.1401	p.R467	0.982	NULL	pfam_Myotubularin-like_Pase_dom,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTMR7	HGNC	ENSG00000003987	tier1	-	-	77	0	0.00	18	41	69.49
MTUS1	0	genome.wustl.edu	37	8	17504618	17504618	+	RNA	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	17504618	17504618	T	A	SNP	MTUS1	ENST00000518889	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	MTUS1	HGNC	ENSG00000129422	tier1	-	-	29	0	0.00	11	18	62.07
MTUS1	0	genome.wustl.edu	37	8	17504627	17504627	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	17504627	17504627	A	-	DEL	MTUS1	ENST00000518889	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	MTUS1	HGNC	ENSG00000129422	tier1			28	0	0.00	12	11	47.83
MUC16	0	genome.wustl.edu	37	19	8971684	8971684	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	8971684	8971684	T	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.42908	p.H14303R	0.573	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	57	0	0.00	53	9	14.52
MUC17	0	genome.wustl.edu	37	7	100677782	100677782	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	100677782	100677782	G	A	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.3085	p.G1029S	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876	tier1	-	-	81	0	0.00	88	54	38.03
MUC4	0	genome.wustl.edu	37	3	195506197	195506197	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	195506197	195506197	T	C	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.12254	p.D4085G	0.164	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				8	0	0.00	14	5	26.32
MUC5B	0	genome.wustl.edu	37	11	1252187	1252187	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	1252187	1252187	G	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.1501	p.G501S	0.325	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	23	0	0.00	21	8	27.59
MUC5B	0	genome.wustl.edu	37	11	1282626	1282626	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	1282626	1282626	G	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.17086	p.A5696T	0.000	smart_Cys_knot_C,pfscan_Cys_knot_C	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	71	0	0.00	68	36	34.29
MUSK	0	genome.wustl.edu	37	9	113457777	113457777	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	113457777	113457777	A	G	SNP	MUSK	ENST00000374448	human	ensembl	74_37	+1	known	silent	c.453	p.S151	0.476	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Frizzled_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MUSK	HGNC	ENSG00000030304	tier1	-	-	40	0	0.00	24	9	27.27
MYBL1	0	genome.wustl.edu	37	8	67488453	67488453	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	67488453	67488453	T	-	DEL	MYBL1	ENST00000522677	human	ensembl	74_37	-1	known	frame_shift_del	c.1259	p.N420fs	0.992	NULL	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYBL1	HGNC	ENSG00000185697	tier1			75	0	0.00	176	46	20.72
MYH11	0	genome.wustl.edu	37	16	15802686	15802687	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	15802686	15802687	-	G	INS	MYH11	ENST00000452625	human	ensembl	74_37	-1	known	frame_shift_ins	c.5820_5819	p.Q1941fs	1.000:1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH11	HGNC	ENSG00000133392	tier1			42	0	0.00	39	13	25.00
MYH6	0	genome.wustl.edu	37	14	23859332	23859334	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	23859332	23859334	CTC	0	DEL	MYH6	ENST00000356287	human	ensembl	74_37	-1	known	in_frame_del	c.3666_3664	p.E1222in_frame_del	1.000:1.000:1.000	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH6	HGNC	ENSG00000197616				53	0	0.00	79	15	15.96
MYH7B	0	genome.wustl.edu	37	20	33565839	33565839	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	33565839	33565839	G	A	SNP	MYH7B	ENST00000262873	human	ensembl	74_37	+1	novel	missense	c.157	p.A53T	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Myosin_S1_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7B	HGNC	ENSG00000078814	tier1	-	-	39	0	0.00	69	26	27.37
MYH7B	0	genome.wustl.edu	37	20	33577720	33577720	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	33577720	33577720	G	A	SNP	MYH7B	ENST00000262873	human	ensembl	74_37	+1	novel	missense	c.1891	p.V631M	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Myosin_S1_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7B	HGNC	ENSG00000078814	tier1	-	-	40	0	0.00	62	12	16.22
MYO18A	0	genome.wustl.edu	37	17	27424355	27424355	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	27424355	27424355	C	T	SNP	MYO18A	ENST00000354329	human	ensembl	74_37	-1	known	silent	c.4116	p.R1372	1.000	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_PDZ,superfamily_P-loop_NTPase,superfamily_PDZ,superfamily_Regulat_G_prot_signal_superfam,smart_PDZ,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_PDZ,pfscan_RecA_monomer-monomer_interface,prints_Myosin_head_motor_dom	-	no_errors	MYO18A	HGNC	ENSG00000196535	tier1	-	-	49	0	0.00	63	17	20.99
MYO18B	0	genome.wustl.edu	37	22	26224901	26224901	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	26224901	26224901	G	A	SNP	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	missense	c.2945	p.R982Q	0.987	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tRNA-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454	tier1	-	-	38	0	0.00	39	33	45.21
MYO1A	0	genome.wustl.edu	37	12	57422573	57422573	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	57422573	57422573	T	-	DEL	MYO1A	ENST00000300119	human	ensembl	74_37	-1	known	frame_shift_del	c.3098	p.K1033fs	1.000	pfam_Myosin_tail_2	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYO1A	HGNC	ENSG00000166866	tier1			52	0	0.00	77	18	18.95
MYO1D	0	genome.wustl.edu	37	17	30986155	30986155	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	30986155	30986155	C	A	SNP	MYO1D	ENST00000318217	human	ensembl	74_37	-1	known	missense	c.2323	p.A775S	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO1D	HGNC	ENSG00000176658	tier1	-	-	66	0	0.00	68	17	20.00
MYO3B	0	genome.wustl.edu	37	2	171371459	171371459	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	171371459	171371459	A	G	SNP	MYO3B	ENST00000334231	human	ensembl	74_37	+1	known	silent	c.3426	p.P1142	0.000	NULL	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3B	HGNC	ENSG00000071909	tier1	-	-	27	0	0.00	28	20	41.67
MYO7A	0	genome.wustl.edu	37	11	76901898	76901898	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	76901898	76901898	A	G	SNP	MYO7A	ENST00000409709	human	ensembl	74_37	+1	known	missense	c.3907	p.I1303V	1.000	pfam_FERM_N,smart_Band_41_domain,pfscan_FERM_domain	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_FERM_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7A	HGNC	ENSG00000137474	tier1	-	-	23	0	0.00	37	22	37.29
MYRFL	0	genome.wustl.edu	37	12	70321513	70321514	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	70321513	70321514	-	A	INS	MYRFL	ENST00000552032	human	ensembl	74_37	+1	putative	frame_shift_ins	c.1815_1816	p.N607fs	0.000:0.000	NULL	pfam_NDT80_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd	-	no_errors	MYRFL	HGNC	ENSG00000166268	tier1			21	0	0.00	16	6	27.27
MYT1L	0	genome.wustl.edu	37	2	1983001	1983001	+	Splice_Site	SNP	T	T	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	1983001	1983001	T	G	SNP	MYT1L	ENST00000399161	human	ensembl	74_37	-1	known	splice_site	c.90-2	e3-2	1.000	-	-	-	no_errors	MYT1L	HGNC	ENSG00000186487	tier1	-	-	21	0	0.00	31	6	16.22
NAA20	0	genome.wustl.edu	37	20	20013995	20013995	+	RNA	SNP	G	G	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	20013995	20013995	G	C	SNP	NAA20	ENST00000463154	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NAA20	HGNC	ENSG00000173418	tier1	-	-	52	0	0.00	92	7	7.00
NAV2-AS1	0	genome.wustl.edu	37	11	20141368	20141368	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	20141368	20141368	A	-	DEL	NAV2-AS1	ENST00000526642	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NAV2-AS1	HGNC	ENSG00000254894	tier1			21	0	0.00	22	9	29.03
NCKAP5	0	genome.wustl.edu	37	2	133489420	133489420	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	133489420	133489420	T	G	SNP	NCKAP5	ENST00000317721	human	ensembl	74_37	-1	known	missense	c.5333	p.D1778A	0.163	NULL	NULL	-	no_errors	NCKAP5	HGNC	ENSG00000176771	tier1	-	-	38	0	0.00	53	29	35.37
NCKAP5	0	genome.wustl.edu	37	2	133539753	133539753	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	133539753	133539753	T	A	SNP	NCKAP5	ENST00000317721	human	ensembl	74_37	-1	known	missense	c.4631	p.N1544I	0.999	NULL	NULL	-	no_errors	NCKAP5	HGNC	ENSG00000176771	tier1	-	-	31	0	0.00	31	6	16.22
NCKAP5	0	genome.wustl.edu	37	2	133540491	133540491	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	133540491	133540491	C	T	SNP	NCKAP5	ENST00000317721	human	ensembl	74_37	-1	known	missense	c.3893	p.R1298H	1.000	NULL	NULL	-	no_errors	NCKAP5	HGNC	ENSG00000176771	tier1	-	-	72	0	0.00	66	19	22.35
NCL	0	genome.wustl.edu	37	2	232326393	232326393	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	232326393	232326393	C	G	SNP	NCL	ENST00000322723	human	ensembl	74_37	-1	known	missense	c.471	p.E157D	0.001	NULL	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom	-	no_errors	NCL	HGNC	ENSG00000115053				173	0	0.00	224	29	11.42
NCOA6	0	genome.wustl.edu	37	20	33346694	33346694	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	33346694	33346694	G	-	DEL	NCOA6	ENST00000359003	human	ensembl	74_37	-1	known	frame_shift_del	c.557	p.P186fs	0.996	NULL	NULL	-	no_errors	NCOA6	HGNC	ENSG00000198646	tier1			20	0	0.00	32	11	25.58
NCOR2	0	genome.wustl.edu	37	12	124862853	124862853	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	124862853	124862853	C	T	SNP	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	silent	c.2097	p.V699	0.615	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498	tier1	-	-	44	0	0.00	72	12	14.29
NDUFB2-AS1	0	genome.wustl.edu	37	7	140395555	140395556	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	140395555	140395556	TT	-	DEL	NDUFB2-AS1	ENST00000465466	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	NDUFB2-AS1	HGNC	ENSG00000240889	tier1			16	0	0.00	27	7	20.59
NDUFB7	0	genome.wustl.edu	37	19	14677646	14677646	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	14677646	14677646	C	T	SNP	NDUFB7	ENST00000215565	human	ensembl	74_37	-1	known	missense	c.212	p.R71H	0.998	pfam_NADH_UbQ_OxRdtase_B18_su	pfam_NADH_UbQ_OxRdtase_B18_su	-	no_errors	NDUFB7	HGNC	ENSG00000099795	tier1	-	-	36	0	0.00	50	11	18.03
NDUFS2	0	genome.wustl.edu	37	1	161179901	161179901	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	161179901	161179901	G	T	SNP	NDUFS2	ENST00000367993	human	ensembl	74_37	+1	known	missense	c.703	p.D235Y	1.000	pfam_NADH_Q_OxRdtase_suD,tigrfam_NDH1_su_D/H	pfam_NADH_Q_OxRdtase_suD,tigrfam_NDH1_su_D/H	-	no_errors	NDUFS2	HGNC	ENSG00000158864	tier1	-	-	46	0	0.00	41	13	24.07
NEB	0	genome.wustl.edu	37	2	152410372	152410372	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	152410372	152410372	G	A	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	silent	c.19596	p.H6532	0.992	smart_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091	tier1	-	-	27	0	0.00	47	18	27.69
NFATC2	0	genome.wustl.edu	37	20	50140068	50140068	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	50140068	50140068	C	T	SNP	NFATC2	ENST00000396009	human	ensembl	74_37	-1	known	missense	c.712	p.V238M	1.000	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC2	HGNC	ENSG00000101096	tier1	-	-	28	0	0.00	56	58	50.88
NFATC2IP	0	genome.wustl.edu	37	16	28967541	28967541	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	28967541	28967541	A	T	SNP	NFATC2IP	ENST00000320805	human	ensembl	74_37	+1	known	missense	c.729	p.Q243H	0.000	NULL	pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	NFATC2IP	HGNC	ENSG00000176953	tier1	-	-	30	0	0.00	22	14	38.89
NFRKB	0	genome.wustl.edu	37	11	129762692	129762692	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	129762692	129762692	C	A	SNP	NFRKB	ENST00000524794	human	ensembl	74_37	-1	known	missense	c.92	p.G31V	1.000	NULL	NULL	-	no_errors	NFRKB	HGNC	ENSG00000170322	tier1	-	-	19	0	0.00	15	8	34.78
NFYA	0	genome.wustl.edu	37	6	41059278	41059279	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	41059278	41059279	-	T	INS	NFYA	ENST00000341376	human	ensembl	74_37	+1	known	frame_shift_ins	c.559_560	p.S188fs	1.000:1.000	NULL	pfam_TF_CBFB,smart_TF_CBFB,pfscan_TF_CBFB,prints_TF_CBFB	-	no_errors	NFYA	HGNC	ENSG00000001167	tier1			26	0	0.00	13	9	40.91
NID1	0	genome.wustl.edu	37	1	236141179	236141179	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	236141179	236141179	G	A	SNP	NID1	ENST00000264187	human	ensembl	74_37	-1	known	silent	c.3732	p.I1244	0.039	smart_EG-like_dom	pfam_G2_nidogen/fibulin_G2F,pfam_LDLR_classB_rpt,pfam_Nidogen_extracell_dom,pfam_Thyroglobulin_1,pfam_EGF-like_Ca-bd_dom,superfamily_GFP,superfamily_Thyroglobulin_1,smart_Nidogen_extracell_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_G2_nidogen/fibulin_G2F,smart_Thyroglobulin_1,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thyroglobulin_1	-	no_errors	NID1	HGNC	ENSG00000116962	tier1	-	-	24	0	0.00	28	12	30.00
NKAPL	0	genome.wustl.edu	37	6	28227519	28227520	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	28227519	28227520	GA	-	DEL	NKAPL	ENST00000343684	human	ensembl	74_37	+1	known	frame_shift_del	c.370_371	p.R127fs	0.996:1.000	NULL	pfam_DUF926	-	no_errors	NKAPL	HGNC	ENSG00000189134	tier1			26	0	0.00	28	4	12.50
NKD1	0	genome.wustl.edu	37	16	50667134	50667135	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	50667134	50667135	-	C	INS	NKD1	ENST00000268459	human	ensembl	74_37	+1	known	frame_shift_ins	c.855_856	p.R287fs	1.000:1.000	NULL	pfscan_EF_hand_dom	-	no_errors	NKD1	HGNC	ENSG00000140807	tier1			24	0	0.00	41	24	36.92
NKRF	0	genome.wustl.edu	37	X	118722358	118722359	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	118722358	118722359	TT	-	DEL	NKRF	ENST00000487600	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.949:0.947	-	-	-	no_errors	NKRF	HGNC	ENSG00000186416	tier1			23	0	0.00	10	12	54.55
NLGN3	0	genome.wustl.edu	37	X	70390928	70390929	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	70390928	70390929	TT	-	DEL	NLGN3	ENST00000476589	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997:0.997	-	-	-	no_errors	NLGN3	HGNC	ENSG00000196338	tier1			22	0	0.00	21	19	47.50
NLRC5	0	genome.wustl.edu	37	16	57113482	57113482	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	57113482	57113482	C	T	SNP	NLRC5	ENST00000262510	human	ensembl	74_37	+1	known	silent	c.5262	p.N1754	0.997	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_NACHT_NTPase	-	no_errors	NLRC5	HGNC	ENSG00000140853				23	0	0.00	60	7	10.45
NLRP12	0	genome.wustl.edu	37	19	54313232	54313232	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	54313232	54313232	G	A	SNP	NLRP12	ENST00000324134	human	ensembl	74_37	-1	known	missense	c.1681	p.R561C	1.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP12	HGNC	ENSG00000142405	tier1	-	-	20	0	0.00	12	12	50.00
NLRP9	0	genome.wustl.edu	37	19	56249721	56249722	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	56249721	56249722	-	A	INS	NLRP9	ENST00000332836	human	ensembl	74_37	-1	known	frame_shift_ins	c.20_19	p.S7fs	0.014:0.009	superfamily_DEATH-like_dom,pfscan_DAPIN	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP9	HGNC	ENSG00000185792	tier1			43	0	0.00	28	18	39.13
NME5	0	genome.wustl.edu	37	5	137451362	137451362	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	137451362	137451362	T	-	DEL	NME5	ENST00000514481	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	NME5	HGNC	ENSG00000112981	tier1			55	0	0.00	45	8	15.09
NME7	0	genome.wustl.edu	37	1	169101823	169101823	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	169101823	169101823	A	G	SNP	NME7	ENST00000493481	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NME7	HGNC	ENSG00000143156	tier1	-	-	11	0	0.00	13	12	48.00
NOC2L	0	genome.wustl.edu	37	1	889215	889215	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	889215	889215	C	T	SNP	NOC2L	ENST00000327044	human	ensembl	74_37	-1	known	missense	c.835	p.V279M	0.008	superfamily_ARM-type_fold	pfam_Noc2,superfamily_ARM-type_fold	-	no_errors	NOC2L	HGNC	ENSG00000188976	tier1	-	-	24	0	0.00	20	10	33.33
NOD2	0	genome.wustl.edu	37	16	50745137	50745137	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	50745137	50745137	C	T	SNP	NOD2	ENST00000300589	human	ensembl	74_37	+1	known	missense	c.1315	p.R439C	0.493	superfamily_P-loop_NTPase	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NOD2	HGNC	ENSG00000167207	tier1	-	-	17	0	0.00	19	11	36.67
NOLC1	0	genome.wustl.edu	37	10	103919299	103919299	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	103919299	103919299	A	-	DEL	NOLC1	ENST00000405356	human	ensembl	74_37	+1	known	frame_shift_del	c.863	p.K290fs	0.998	NULL	pfam_SRP40_C,pfscan_LisH_dimerisation	-	no_errors	NOLC1	HGNC	ENSG00000166197	tier1			28	0	0.00	18	9	33.33
NOS3	0	genome.wustl.edu	37	7	150707781	150707783	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	150707781	150707783	CTC	-	DEL	NOS3	ENST00000297494	human	ensembl	74_37	+1	known	in_frame_del	c.2782_2784	p.L929in_frame_del	1.000:1.000:1.000	pfam_FAD-binding_1,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_euk,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS3	HGNC	ENSG00000164867	tier1			26	0	0.00	69	17	19.77
NOTCH1	0	genome.wustl.edu	37	9	139399786	139399789	+	Frame_Shift_Del	DEL	CAGT	CAGT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CAGT	CAGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	139399786	139399789	CAGT	-	DEL	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	frame_shift_del	c.4562_4559	p.D1520fs	1.000:1.000:1.000:1.000	superfamily_Notch_dom,smart_Notch_dom,pirsf_Notch,pfscan_Notch_dom,prints_Notch_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400	tier1			18	0	0.00	21	17	44.74
NOTCH1	0	genome.wustl.edu	37	9	139401189	139401189	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	139401189	139401189	C	A	SNP	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	nonsense	c.3880	p.E1294*	1.000	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_Notch,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400	tier1	-	-	37	0	0.00	13	72	84.71
NPAS2	0	genome.wustl.edu	37	2	101598834	101598834	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	101598834	101598834	G	A	SNP	NPAS2	ENST00000542504	human	ensembl	74_37	+1	known	missense	c.1819	p.V607I	0.062	NULL	pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_Nuc_translocat,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	NPAS2	HGNC	ENSG00000170485	tier1	-	-	24	0	0.00	20	17	45.95
NPHP1	0	genome.wustl.edu	37	2	110882862	110882862	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	110882862	110882862	T	-	DEL	NPHP1	ENST00000417665	human	ensembl	74_37	-1	novel	frame_shift_del	c.1797	p.K599fs	0.000	NULL	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	NPHP1	HGNC	ENSG00000144061	tier1			96	0	0.00	98	61	38.36
NRIP2	0	genome.wustl.edu	37	12	2943918	2943918	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	2943918	2943918	G	T	SNP	NRIP2	ENST00000337508	human	ensembl	74_37	-1	known	missense	c.232	p.H78N	0.994	NULL	pfam_Peptidase_aspartic_DDI1-type,superfamily_Peptidase_aspartic_dom	-	no_errors	NRIP2	HGNC	ENSG00000053702	tier1	-	-	49	0	0.00	74	43	36.75
NRXN3	0	genome.wustl.edu	37	14	79270068	79270068	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	79270068	79270068	G	A	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	missense	c.2144	p.R715Q	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645	tier1	-	-	44	0	0.00	19	72	79.12
NT5DC3	0	genome.wustl.edu	37	12	104187260	104187260	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	104187260	104187260	C	T	SNP	NT5DC3	ENST00000392876	human	ensembl	74_37	-1	known	missense	c.845	p.R282H	0.997	pfam_HAD-SF_hydro_IG_5-nucl,superfamily_HAD-like_dom,pirsf_Pur_nucleotidase,tigrfam_HAD-SF_hydro_IG_5-nucl	pfam_HAD-SF_hydro_IG_5-nucl,superfamily_HAD-like_dom,pirsf_Pur_nucleotidase,tigrfam_HAD-SF_hydro_IG_5-nucl	-	no_errors	NT5DC3	HGNC	ENSG00000111696	tier1	rs200566738	-	29	0	0.00	41	12	22.64
NTAN1	0	genome.wustl.edu	37	16	15132457	15132457	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	15132457	15132457	G	A	SNP	NTAN1	ENST00000287706	human	ensembl	74_37	-1	known	missense	c.727	p.H243Y	1.000	NULL	NULL	-	no_errors	NTAN1	HGNC	ENSG00000157045	tier1	-	-	56	0	0.00	56	21	27.27
NTM	0	genome.wustl.edu	37	11	132205624	132205625	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	132205624	132205625	TT	-	DEL	NTM	ENST00000474900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.011	-	-	-	no_errors	NTM	HGNC	ENSG00000182667	tier1			23	0	0.00	6	6	50.00
NTM	0	genome.wustl.edu	37	11	132206082	132206083	+	RNA	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	132206082	132206083	-	T	INS	NTM	ENST00000474900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998:0.998	-	-	-	no_errors	NTM	HGNC	ENSG00000182667	tier1			24	0	0.00	20	10	33.33
NTM	0	genome.wustl.edu	37	11	132206566	132206567	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	132206566	132206567	TT	-	DEL	NTM	ENST00000474900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.131:0.164	-	-	-	no_errors	NTM	HGNC	ENSG00000182667	tier1			13	0	0.00	13	6	31.58
NUDCD3	0	genome.wustl.edu	37	7	44432048	44432048	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	44432048	44432048	C	T	SNP	NUDCD3	ENST00000355451	human	ensembl	74_37	-1	known	missense	c.823	p.A275T	1.000	superfamily_HSP20-like_chaperone,pfscan_CS_dom	pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom	-	no_errors	NUDCD3	HGNC	ENSG00000015676	tier1	-	-	56	0	0.00	83	30	26.55
NUFIP1	0	genome.wustl.edu	37	13	45556208	45556208	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	45556208	45556208	T	-	DEL	NUFIP1	ENST00000379161	human	ensembl	74_37	-1	known	frame_shift_del	c.494	p.K165fs	1.000	NULL	pfam_NUFIP1_cons_dom,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	NUFIP1	HGNC	ENSG00000083635	tier1			42	0	0.00	47	12	20.34
NUP35	0	genome.wustl.edu	37	2	184023093	184023093	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	184023093	184023093	T	-	DEL	NUP35	ENST00000295119	human	ensembl	74_37	+1	known	frame_shift_del	c.692	p.F232fs	1.000	pfam_RRM_NUP35_dom,pirsf_Nucleoporin_NUP53	pfam_RRM_NUP35_dom,pirsf_Nucleoporin_NUP53	-	no_errors	NUP35	HGNC	ENSG00000163002	tier1			32	0	0.00	77	12	13.48
NUP35	0	genome.wustl.edu	37	2	184025805	184025805	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	184025805	184025805	A	-	DEL	NUP35	ENST00000295119	human	ensembl	74_37	+1	known	frame_shift_del	c.927	p.D312fs	0.996	pirsf_Nucleoporin_NUP53	pfam_RRM_NUP35_dom,pirsf_Nucleoporin_NUP53	-	no_errors	NUP35	HGNC	ENSG00000163002	tier1			19	0	0.00	19	4	17.39
OBSCN	0	genome.wustl.edu	37	1	228496835	228496835	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	228496835	228496835	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.12775	p.V4259M	0.002	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1	-	-	23	0	0.00	25	7	21.88
OLFML2A	0	genome.wustl.edu	37	9	127563354	127563354	+	Splice_Site	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	127563354	127563354	G	T	SNP	OLFML2A	ENST00000288815	human	ensembl	74_37	+1	known	splice_site	c.27+1	e1+1	0.000	-	-	-	no_errors	OLFML2A	HGNC	ENSG00000185585	tier1	-	-	35	0	0.00	54	4	6.90
OR10A2	0	genome.wustl.edu	37	11	6891852	6891852	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	6891852	6891852	C	G	SNP	OR10A2	ENST00000307322	human	ensembl	74_37	+1	known	missense	c.867	p.S289R	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10A2	HGNC	ENSG00000170790	tier1	-	-	42	0	0.00	39	15	27.78
OR13G1	0	genome.wustl.edu	37	1	247836052	247836052	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	247836052	247836052	G	C	SNP	OR13G1	ENST00000359688	human	ensembl	74_37	-1	known	missense	c.292	p.L98V	0.058	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR13G1	HGNC	ENSG00000197437	tier1	-	-	34	0	0.00	43	9	17.31
OR2F1	0	genome.wustl.edu	37	7	143657236	143657236	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	143657236	143657236	C	T	SNP	OR2F1	ENST00000392899	human	ensembl	74_37	+1	known	missense	c.173	p.P58L	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2F1	HGNC	ENSG00000213215	tier1	-	-	103	0	0.00	122	77	38.69
OR2J1	0	genome.wustl.edu	37	6	29068729	29068729	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	29068729	29068729	A	-	DEL	OR2J1	ENST00000377171	human	ensembl	74_37	+1	known	frame_shift_del	c.10	p.N6fs	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR2J1	HGNC	ENSG00000204702	tier1			42	0	0.00	34	7	17.07
OR4A47	0	genome.wustl.edu	37	11	48510904	48510904	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	48510904	48510904	G	A	SNP	OR4A47	ENST00000446524	human	ensembl	74_37	+1	known	missense	c.560	p.C187Y	0.853	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A47	HGNC	ENSG00000237388	tier1	-	-	56	0	0.00	59	11	15.71
OR4C46	0	genome.wustl.edu	37	11	51515970	51515970	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	51515970	51515970	C	T	SNP	OR4C46	ENST00000328188	human	ensembl	74_37	+1	known	missense	c.689	p.A230V	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C46	HGNC	ENSG00000185926	tier1	-	-	128	0	0.00	136	18	11.69
OR4D5	0	genome.wustl.edu	37	11	123810341	123810341	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	123810341	123810341	T	C	SNP	OR4D5	ENST00000307033	human	ensembl	74_37	+1	known	silent	c.18	p.H6	0.193	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4D5	HGNC	ENSG00000171014	tier1	-	-	66	0	0.00	42	49	53.85
OR52N5	0	genome.wustl.edu	37	11	5799652	5799652	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	5799652	5799652	A	-	DEL	OR52N5	ENST00000317093	human	ensembl	74_37	-1	known	frame_shift_del	c.213	p.F71fs	0.971	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	-	no_errors	OR52N5	HGNC	ENSG00000181009	tier1			23	0	0.00	28	6	17.65
OR5P2	0	genome.wustl.edu	37	11	7818170	7818170	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	7818170	7818170	T	A	SNP	OR5P2	ENST00000329434	human	ensembl	74_37	-1	known	missense	c.320	p.E107V	0.999	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5P2	HGNC	ENSG00000183303	tier1	-	-	40	0	0.00	34	21	38.18
OR5P2	0	genome.wustl.edu	37	11	7818171	7818171	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	7818171	7818171	C	A	SNP	OR5P2	ENST00000329434	human	ensembl	74_37	-1	known	nonsense	c.319	p.E107*	0.921	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5P2	HGNC	ENSG00000183303	tier1	-	-	38	0	0.00	35	21	37.50
OR7D2	0	genome.wustl.edu	37	19	9296772	9296773	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	9296772	9296773	-	T	INS	OR7D2	ENST00000344248	human	ensembl	74_37	+1	known	frame_shift_ins	c.315_316	p.P107fs	0.000:0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7D2	HGNC	ENSG00000188000	tier1			84	0	0.00	60	35	36.84
OR8D4	0	genome.wustl.edu	37	11	123777442	123777442	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	123777442	123777442	T	-	DEL	OR8D4	ENST00000321355	human	ensembl	74_37	+1	known	frame_shift_del	c.304	p.F104fs	0.939	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8D4	HGNC	ENSG00000181518	tier1			87	0	0.00	85	22	20.56
OR8G1	0	genome.wustl.edu	37	11	124120778	124120778	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	124120778	124120778	C	T	SNP	OR8G1	ENST00000341493	human	ensembl	74_37	+1	known	missense	c.356	p.A119V	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8G1	HGNC	ENSG00000197849	tier1	-	-	144	0	0.00	136	41	23.03
OS9	0	genome.wustl.edu	37	12	58112063	58112063	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	58112063	58112063	G	A	SNP	OS9	ENST00000315970	human	ensembl	74_37	+1	known	silent	c.1269	p.E423	0.976	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom	-	no_errors	OS9	HGNC	ENSG00000135506	tier1	-	-	20	0	0.00	25	32	56.14
OSGEPL1	0	genome.wustl.edu	37	2	190626331	190626331	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	190626331	190626331	A	-	DEL	OSGEPL1	ENST00000264151	human	ensembl	74_37	-1	known	frame_shift_del	c.36	p.F12fs	0.000	NULL	pfam_Gcp-like_dom,prints_KAE1/YgjD,tigrfam_KAE1/YgjD	-	no_errors	OSGEPL1	HGNC	ENSG00000128694	tier1			26	0	0.00	16	13	44.83
OTOF	0	genome.wustl.edu	37	2	26684619	26684619	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	26684619	26684619	C	T	SNP	OTOF	ENST00000272371	human	ensembl	74_37	-1	known	silent	c.5478	p.A1826	0.713	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	OTOF	HGNC	ENSG00000115155	tier1	-	-	31	0	0.00	52	27	34.18
OTOP1	0	genome.wustl.edu	37	4	4198967	4198967	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	4198967	4198967	G	A	SNP	OTOP1	ENST00000296358	human	ensembl	74_37	-1	known	missense	c.1594	p.R532C	0.000	NULL	pfam_Otopetrin	-	no_errors	OTOP1	HGNC	ENSG00000163982	tier1	rs137867656	-	34	0	0.00	66	4	5.71
PANK2	0	genome.wustl.edu	37	20	3888689	3888689	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	3888689	3888689	C	T	SNP	PANK2	ENST00000316562	human	ensembl	74_37	+1	known	missense	c.745	p.R249W	1.000	pfam_Type_II_PanK,tigrfam_Type_II_PanK	pfam_Type_II_PanK,tigrfam_Type_II_PanK	-	no_errors	PANK2	HGNC	ENSG00000125779	tier1	-	-	27	0	0.00	29	13	30.23
PAPD5	0	genome.wustl.edu	37	16	50263455	50263455	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	50263455	50263455	A	-	DEL	PAPD5	ENST00000573002	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	PAPD5	HGNC	ENSG00000121274	tier1			19	0	0.00	21	21	50.00
PAPD7	0	genome.wustl.edu	37	5	6755014	6755014	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	6755014	6755014	C	A	SNP	PAPD7	ENST00000230859	human	ensembl	74_37	+1	known	missense	c.1585	p.H529N	1.000	NULL	pfam_PAP_assoc,pfam_Nucleotidyltransferase	-	no_errors	PAPD7	HGNC	ENSG00000112941				18	0	0.00	56	8	12.50
PAPPA2	0	genome.wustl.edu	37	1	176526097	176526097	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	176526097	176526097	C	T	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	silent	c.639	p.S213	0.000	superfamily_ConA-like_lec_gl_sf	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	tier1	-	-	30	0	0.00	21	11	34.38
PARP3	0	genome.wustl.edu	37	3	51980259	51980259	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	51980259	51980259	C	T	SNP	PARP3	ENST00000398755	human	ensembl	74_37	+1	known	silent	c.1197	p.A399	0.894	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Poly(ADP-ribose)pol_reg_dom,pfam_WGR_domain,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_WGR_domain,smart_WGR_domain,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP3	HGNC	ENSG00000041880	tier1	-	-	16	0	0.00	10	7	41.18
PATL1	0	genome.wustl.edu	37	11	59425146	59425146	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	59425146	59425146	G	-	DEL	PATL1	ENST00000300146	human	ensembl	74_37	-1	known	frame_shift_del	c.478	p.Q160fs	0.999	pfam_Topo_II-assoc_PAT1	pfam_Topo_II-assoc_PAT1	-	no_errors	PATL1	HGNC	ENSG00000166889	tier1			30	0	0.00	28	13	31.71
PAXIP1	0	genome.wustl.edu	37	7	154782740	154782740	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	154782740	154782740	A	-	DEL	PAXIP1	ENST00000397192	human	ensembl	74_37	-1	known	frame_shift_del	c.300	p.F100fs	1.000	pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	PAXIP1	HGNC	ENSG00000157212	tier1			29	0	0.00	36	6	14.29
PCDH11X	0	genome.wustl.edu	37	X	91091004	91091004	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	91091004	91091004	C	T	SNP	PCDH11X	ENST00000373094	human	ensembl	74_37	+1	known	silent	c.501	p.D167	0.250	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11X	HGNC	ENSG00000102290	tier1	-	-	38	0	0.00	9	36	80.00
PCDH17	0	genome.wustl.edu	37	13	58206843	58206843	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	58206843	58206843	G	A	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	missense	c.163	p.G55S	0.986	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946	tier1	-	-	14	0	0.00	2	6	75.00
PCDH20	0	genome.wustl.edu	37	13	61986976	61986976	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	61986976	61986976	A	G	SNP	PCDH20	ENST00000409186	human	ensembl	74_37	-1	known	missense	c.1256	p.V419A	0.996	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH20	HGNC	ENSG00000197991	tier1	-	-	25	0	0.00	12	9	42.86
PCDHA13	0	genome.wustl.edu	37	5	140262129	140262129	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	140262129	140262129	C	T	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	silent	c.276	p.R92	0.551	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389	tier1	-	-	58	0	0.00	63	61	48.80
PCDHA2	0	genome.wustl.edu	37	5	140176199	140176199	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	140176199	140176199	G	A	SNP	PCDHA2	ENST00000526136	human	ensembl	74_37	+1	known	silent	c.1650	p.T550	0.518	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA2	HGNC	ENSG00000204969	tier1	-	-	98	0	0.00	139	63	31.19
PCDHB15	0	genome.wustl.edu	37	5	140626827	140626827	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	140626827	140626827	G	A	SNP	PCDHB15	ENST00000231173	human	ensembl	74_37	+1	known	missense	c.1681	p.V561M	0.655	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB15	HGNC	ENSG00000113248	tier1	-	-	91	0	0.00	53	122	69.32
PCDHB16	0	genome.wustl.edu	37	5	140563150	140563150	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	140563150	140563150	A	G	SNP	PCDHB16	ENST00000361016	human	ensembl	74_37	+1	known	missense	c.1016	p.D339G	0.999	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB16	HGNC	ENSG00000196963	tier1	-	-	28	0	0.00	26	9	25.71
PCDHB16	0	genome.wustl.edu	37	5	140563850	140563850	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	140563850	140563850	C	T	SNP	PCDHB16	ENST00000361016	human	ensembl	74_37	+1	known	silent	c.1716	p.C572	0.966	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB16	HGNC	ENSG00000196963	tier1	-	-	43	0	0.00	138	43	23.76
PCDHB3	0	genome.wustl.edu	37	5	140480982	140480982	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	140480982	140480982	C	T	SNP	PCDHB3	ENST00000231130	human	ensembl	74_37	+1	known	missense	c.749	p.A250V	0.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB3	HGNC	ENSG00000113205	tier1	-	-	22	0	0.00	5	18	78.26
PCDHGB2	0	genome.wustl.edu	37	5	140741195	140741195	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	140741195	140741195	C	T	SNP	PCDHGB2	ENST00000522605	human	ensembl	74_37	+1	known	missense	c.1493	p.P498L	0.078	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB2	HGNC	ENSG00000253910	tier1	-	-	43	0	0.00	12	42	77.78
PCDHGB4	0	genome.wustl.edu	37	5	140768214	140768214	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	140768214	140768214	G	A	SNP	PCDHGB4	ENST00000519479	human	ensembl	74_37	+1	known	missense	c.763	p.V255M	0.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB4	HGNC	ENSG00000253953	tier1	-	-	21	0	0.00	40	16	28.57
PCGF6	0	genome.wustl.edu	37	10	105063538	105063538	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	105063538	105063538	A	-	DEL	PCGF6	ENST00000490296	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.070	-	-	-	no_errors	PCGF6	HGNC	ENSG00000156374	tier1			49	0	0.00	38	17	30.91
PCNP	0	genome.wustl.edu	37	3	101311692	101311692	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	101311692	101311692	T	-	DEL	PCNP	ENST00000486406	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.864	-	-	-	no_errors	PCNP	HGNC	ENSG00000081154	tier1			28	0	0.00	27	8	22.86
PCNT	0	genome.wustl.edu	37	21	47858171	47858173	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	21	47858171	47858173	AGA	-	DEL	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	in_frame_del	c.9194_9196	p.K3066in_frame_del	1.000:1.000:1.000	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299	tier1			29	0	0.00	18	26	59.09
PDE4D	0	genome.wustl.edu	37	5	58271490	58271490	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	58271490	58271490	T	-	DEL	PDE4D	ENST00000340635	human	ensembl	74_37	-1	known	frame_shift_del	c.2007	p.K669fs	1.000	pfam_PDEase_catalytic_dom	pfam_PDEase_catalytic_dom,prints_PDEase	-	no_errors	PDE4D	HGNC	ENSG00000113448	tier1			49	0	0.00	19	31	62.00
PDE5A	0	genome.wustl.edu	37	4	120484001	120484001	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	120484001	120484001	T	C	SNP	PDE5A	ENST00000354960	human	ensembl	74_37	-1	known	missense	c.1118	p.D373G	1.000	pfam_GAF,smart_GAF	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE5A	HGNC	ENSG00000138735	tier1	-	-	56	0	0.00	41	11	21.15
PDE9A	0	genome.wustl.edu	37	21	44195538	44195540	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	21	44195538	44195540	AAA	-	DEL	PDE9A	ENST00000460989	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	PDE9A	HGNC	ENSG00000160191	tier1			15	0	0.00	5	7	58.33
PDIA5	0	genome.wustl.edu	37	3	122880331	122880332	+	RNA	INS	-	-	CT			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	122880331	122880332	-	CT	INS	PDIA5	ENST00000467157	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005:0.036	-	-	-	no_errors	PDIA5	HGNC	ENSG00000065485	tier1			23	0	0.00	16	5	23.81
PDLIM7	0	genome.wustl.edu	37	5	176910724	176910724	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	176910724	176910724	T	G	SNP	PDLIM7	ENST00000355841	human	ensembl	74_37	-1	known	missense	c.1295	p.Q432P	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	PDLIM7	HGNC	ENSG00000196923	tier1	-	-	30	0	0.00	9	46	83.64
PDX1	0	genome.wustl.edu	37	13	28498619	28498619	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	28498619	28498619	C	T	SNP	PDX1	ENST00000381033	human	ensembl	74_37	+1	known	silent	c.633	p.G211	0.994	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	PDX1	HGNC	ENSG00000139515				12	0	0.00	30	5	14.29
PDZD2	0	genome.wustl.edu	37	5	32087827	32087827	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	32087827	32087827	A	G	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.4273	p.T1425A	0.993	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	tier1	-	-	30	0	0.00	89	18	16.82
PER1	0	genome.wustl.edu	37	17	8053368	8053368	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	8053368	8053368	C	T	SNP	PER1	ENST00000317276	human	ensembl	74_37	-1	known	silent	c.450	p.P150	0.898	NULL	pfam_Period_circadian-like_C,pfam_PAS_fold_3,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PER1	HGNC	ENSG00000179094				19	0	0.00	31	4	10.81
PER3	0	genome.wustl.edu	37	1	7846785	7846785	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	7846785	7846785	C	T	SNP	PER3	ENST00000361923	human	ensembl	74_37	+1	known	silent	c.279	p.N93	1.000	NULL	pfam_Period_circadian-like_C,pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PER3	HGNC	ENSG00000049246	tier1	-	-	51	0	0.00	48	14	22.58
PGM5	0	genome.wustl.edu	37	9	71094403	71094403	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	71094403	71094403	G	A	SNP	PGM5	ENST00000396396	human	ensembl	74_37	+1	known	missense	c.1229	p.R410Q	1.000	pfam_A-D-PHexomutase_a/b/a-III,superfamily_A-D-PHexomutase_a/b/a-I/II/III	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_a/b/a-II,superfamily_A-D-PHexomutase_a/b/a-I/II/III,prints_Alpha-D-phosphohexomutase_SF	-	no_errors	PGM5	HGNC	ENSG00000154330	tier1	-	-	44	0	0.00	13	47	78.33
PHACTR1	0	genome.wustl.edu	37	6	13278490	13278490	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	13278490	13278490	T	-	DEL	PHACTR1	ENST00000481706	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.709	-	-	-	no_errors	PHACTR1	HGNC	ENSG00000112137	tier1			25	0	0.00	19	16	45.71
PHF1	0	genome.wustl.edu	37	6	33382566	33382566	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	33382566	33382566	C	-	DEL	PHF1	ENST00000374516	human	ensembl	74_37	+1	known	frame_shift_del	c.1009	p.P338fs	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF1	HGNC	ENSG00000112511	tier1			24	0	0.00	20	6	23.08
PHF12	0	genome.wustl.edu	37	17	27234682	27234682	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	27234682	27234682	T	A	SNP	PHF12	ENST00000332830	human	ensembl	74_37	-1	known	missense	c.2467	p.M823L	1.000	superfamily_SMAD_FHA_domain,pfscan_FHA_dom	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,superfamily_SMAD_FHA_domain,smart_Znf_PHD,pfscan_FHA_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF12	HGNC	ENSG00000109118	tier1	-	-	36	0	0.00	46	34	42.50
PHF21B	0	genome.wustl.edu	37	22	45312251	45312251	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	45312251	45312251	C	T	SNP	PHF21B	ENST00000313237	human	ensembl	74_37	-1	known	missense	c.473	p.S158N	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF21B	HGNC	ENSG00000056487	tier1	-	-	25	0	0.00	30	13	30.23
PHLDB1	0	genome.wustl.edu	37	11	118499019	118499019	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	118499019	118499019	C	T	SNP	PHLDB1	ENST00000361417	human	ensembl	74_37	+1	known	missense	c.1480	p.R494C	1.000	NULL	pfam_Pleckstrin_homology,superfamily_SMAD_FHA_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB1	HGNC	ENSG00000019144	tier1	-	-	21	0	0.00	21	21	50.00
PHTF2	0	genome.wustl.edu	37	7	77569845	77569845	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	77569845	77569845	C	T	SNP	PHTF2	ENST00000248550	human	ensembl	74_37	+1	known	nonsense	c.1741	p.R581*	1.000	NULL	pfam_TF_homeodomain_male	-	no_errors	PHTF2	HGNC	ENSG00000006576	tier1	-	-	41	0	0.00	43	11	20.37
PI4KA	0	genome.wustl.edu	37	22	21147531	21147531	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	21147531	21147531	C	T	SNP	PI4KA	ENST00000255882	human	ensembl	74_37	-1	known	missense	c.2278	p.A760T	1.000	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PI4KA	HGNC	ENSG00000241973	tier1	-	-	22	0	0.00	19	6	24.00
PIBF1	0	genome.wustl.edu	37	13	73505320	73505320	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	73505320	73505320	G	C	SNP	PIBF1	ENST00000326291	human	ensembl	74_37	+1	known	missense	c.1748	p.R583T	1.000	NULL	superfamily_t-SNARE	-	no_errors	PIBF1	HGNC	ENSG00000083535	tier1	-	-	18	0	0.00	7	7	50.00
PIEZO2	0	genome.wustl.edu	37	18	10699097	10699097	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	10699097	10699097	C	T	SNP	PIEZO2	ENST00000538948	human	ensembl	74_37	-1	known	missense	c.52	p.G18S	0.000	NULL	pfam_Piezo	-	no_errors	PIEZO2	HGNC	ENSG00000154864	tier1	-	-	28	0	0.00	22	15	40.54
PIK3CA	0	genome.wustl.edu	37	3	178921458	178921458	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	178921458	178921458	G	T	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.940	p.A314S	1.000	NULL	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879				48	0	0.00	92	5	5.15
PIK3R3	0	genome.wustl.edu	37	1	46508950	46508951	+	RNA	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	46508950	46508951	-	A	INS	PIK3R3	ENST00000488808	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006:0.000	-	-	-	no_errors	PIK3R3	HGNC	ENSG00000117461	tier1			18	0	0.00	11	7	38.89
PILRB	0	genome.wustl.edu	37	7	99956488	99956490	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	99956488	99956490	CTT	-	DEL	PILRB	ENST00000444073	human	ensembl	74_37	+1	known	in_frame_del	c.240_242	p.F81in_frame_del	0.108:0.107:0.153	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	PILRB	HGNC	ENSG00000121716	tier1			57	0	0.00	72	17	19.10
PINK1	0	genome.wustl.edu	37	1	20977076	20977076	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	20977076	20977076	G	T	SNP	PINK1	ENST00000321556	human	ensembl	74_37	+1	known	missense	c.1638	p.E546D	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PINK1	HGNC	ENSG00000158828	tier1	-	-	26	0	0.00	11	21	65.62
PIP4K2A	0	genome.wustl.edu	37	10	22830827	22830828	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	22830827	22830828	-	G	INS	PIP4K2A	ENST00000376573	human	ensembl	74_37	-1	known	frame_shift_ins	c.942_941	p.D315fs	0.026:1.000	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP4K2A	HGNC	ENSG00000150867	tier1			13	0	0.00	7	15	68.18
PIR	0	genome.wustl.edu	37	X	15408207	15408208	+	RNA	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	15408207	15408208	-	A	INS	PIR	ENST00000484433	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.001	-	-	-	no_errors	PIR	HGNC	ENSG00000087842	tier1			12	0	0.00	10	9	47.37
PIWIL2	0	genome.wustl.edu	37	8	22211817	22211817	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	22211817	22211817	G	A	SNP	PIWIL2	ENST00000356766	human	ensembl	74_37	+1	known	silent	c.2691	p.R897	0.937	pfam_Piwi,superfamily_RNaseH-like_dom,smart_Piwi,pfscan_Piwi	pfam_Piwi,pfam_PAZ_dom,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	PIWIL2	HGNC	ENSG00000197181	tier1	-	-	64	0	0.00	16	35	68.63
PKD1L1	0	genome.wustl.edu	37	7	47925456	47925456	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	47925456	47925456	C	A	SNP	PKD1L1	ENST00000289672	human	ensembl	74_37	-1	known	missense	c.3033	p.E1011D	0.000	pfam_PKD/REJ-like,pfscan_REJ-like	pfam_PKD/REJ-like,pfam_PKD1_2_channel,pfam_PKD_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,superfamily_PKD_dom,smart_PKD/Chitinase_dom,smart_PLAT/LH2_dom,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like	-	no_errors	PKD1L1	HGNC	ENSG00000158683	tier1	-	-	19	0	0.00	53	23	30.26
PKD1P6	0	genome.wustl.edu	37	16	15225202	15225202	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	15225202	15225202	A	G	SNP	PKD1P6	ENST00000424133	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PKD1P6	HGNC	ENSG00000250251	tier1	-	-	87	0	0.00	57	66	53.66
PKDREJ	0	genome.wustl.edu	37	22	46655330	46655330	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	46655330	46655330	C	T	SNP	PKDREJ	ENST00000253255	human	ensembl	74_37	-1	known	missense	c.3890	p.R1297H	0.031	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom	pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_Ion_trans_dom,superfamily_Lipase_LipOase,smart_GPS_dom,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,prints_PKD_2	-	no_errors	PKDREJ	HGNC	ENSG00000130943	tier1	-	-	57	0	0.00	33	22	40.00
PKN3	0	genome.wustl.edu	37	9	131482844	131482844	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	131482844	131482844	C	T	SNP	PKN3	ENST00000291906	human	ensembl	74_37	+1	known	missense	c.2629	p.R877W	0.997	pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_AGC-kinase_C	pfam_Prot_kinase_dom,pfam_HR1_rho-bd,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,superfamily_C2_dom,smart_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	PKN3	HGNC	ENSG00000160447	tier1	-	-	24	0	0.00	19	44	69.84
PLCB4	0	genome.wustl.edu	37	20	9460657	9460658	+	RNA	INS	-	-	TA			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	9460657	9460658	-	TA	INS	PLCB4	ENST00000464199	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.024:0.089	-	-	-	no_errors	PLCB4	HGNC	ENSG00000101333	tier1			17	0	0.00	20	9	31.03
PLD2	0	genome.wustl.edu	37	17	4711646	4711646	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	4711646	4711646	T	-	DEL	PLD2	ENST00000263088	human	ensembl	74_37	+1	known	frame_shift_del	c.318	p.Q108fs	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pirsf_PLipase_D_euk,pfscan_Phox	pfam_Phox,pfam_PLipase_D/transphosphatidylase,superfamily_Phox,smart_Phox,smart_Pleckstrin_homology,smart_PLipase_D/transphosphatidylase,pirsf_PLipase_D_euk,pfscan_Phox,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD2	HGNC	ENSG00000129219	tier1			22	0	0.00	47	17	26.56
PLEC	0	genome.wustl.edu	37	8	145008493	145008493	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	145008493	145008493	A	G	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	missense	c.1573	p.F525L	1.000	NULL	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209	tier1	-	-	40	0	0.00	113	51	31.10
PLEKHG4	0	genome.wustl.edu	37	16	67320198	67320198	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	67320198	67320198	G	A	SNP	PLEKHG4	ENST00000360461	human	ensembl	74_37	+1	known	missense	c.2464	p.A822T	0.997	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG4	HGNC	ENSG00000196155	tier1	-	-	70	0	0.00	74	99	57.23
PLEKHG4B	0	genome.wustl.edu	37	5	156905	156905	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	156905	156905	C	T	SNP	PLEKHG4B	ENST00000283426	human	ensembl	74_37	+1	known	missense	c.1298	p.A433V	0.023	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG4B	HGNC	ENSG00000153404	tier1	-	-	19	0	0.00	93	21	18.26
PLEKHG4B	0	genome.wustl.edu	37	5	171525	171525	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	171525	171525	A	G	SNP	PLEKHG4B	ENST00000283426	human	ensembl	74_37	+1	known	missense	c.2948	p.D983G	1.000	superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,superfamily_CRAL-TRIO_dom,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG4B	HGNC	ENSG00000153404	tier1	-	-	12	0	0.00	63	20	23.81
PLSCR1	0	genome.wustl.edu	37	3	146239638	146239640	+	In_Frame_Del	DEL	ACA	ACA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	ACA	ACA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	146239638	146239640	ACA	-	DEL	PLSCR1	ENST00000342435	human	ensembl	74_37	-1	known	in_frame_del	c.558_556	p.C186in_frame_del	0.786:0.008:0.108	pfam_Scramblase	pfam_Scramblase,superfamily_Tubby_C-like	-	no_errors	PLSCR1	HGNC	ENSG00000188313	tier1			35	0	0.00	73	11	13.10
PLXNB1	0	genome.wustl.edu	37	3	48465484	48465485	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	48465484	48465485	0	C	INS	PLXNB1	ENST00000296440	human	ensembl	74_37	-1	known	frame_shift_ins	c.537_536	p.G180fs	0.987:1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB1	HGNC	ENSG00000164050				11	0	0.00	8	4	33.33
PLXNB3	0	genome.wustl.edu	37	X	153044130	153044130	+	Splice_Site	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	153044130	153044130	G	A	SNP	PLXNB3	ENST00000538966	human	ensembl	74_37	+1	known	splice_site	c.5694+1	e34+1	1.000	-	-	-	no_errors	PLXNB3	HGNC	ENSG00000198753	tier1	-	-	18	0	0.00	5	23	82.14
PML	0	genome.wustl.edu	37	15	74335396	74335396	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	74335396	74335396	C	A	SNP	PML	ENST00000268058	human	ensembl	74_37	+1	known	missense	c.1777	p.L593I	0.014	NULL	pfam_DUF3583,pfam_Znf_B-box,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	PML	HGNC	ENSG00000140464	tier1	-	-	19	0	0.00	18	21	53.85
PNKD	0	genome.wustl.edu	37	2	219135295	219135296	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	219135295	219135296	-	G	INS	PNKD	ENST00000273077	human	ensembl	74_37	+1	known	frame_shift_ins	c.37_38	p.A15fs	1.000:1.000	NULL	pfam_Beta-lactamas-like,smart_Beta-lactamas-like,tigrfam_Hydroxyacylglutathione_Hdrlase	-	no_errors	PNKD	HGNC	ENSG00000127838	tier1			10	0	0.00	27	9	25.00
POGK	0	genome.wustl.edu	37	1	166818617	166818617	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	166818617	166818617	C	T	SNP	POGK	ENST00000367875	human	ensembl	74_37	+1	known	silent	c.801	p.A267	0.361	pfam_HTH_CenpB_DNA-bd_dom,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom	pfam_DDE_SF_endonuclease_CENPB-like,pfam_Brinker_DNA-bd,pfam_HTH_CenpB_DNA-bd_dom,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,superfamily_Homeodomain-like,smart_Krueppel-associated_box,smart_HTH_CenpB_DNA-bd_dom,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	POGK	HGNC	ENSG00000143157	tier1	-	-	15	0	0.00	25	7	21.88
POLR1C	0	genome.wustl.edu	37	6	43488100	43488102	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	43488100	43488102	TCC	-	DEL	POLR1C	ENST00000372389	human	ensembl	74_37	+1	known	in_frame_del	c.590_592	p.L198in_frame_del	1.000:1.000:1.000	pfam_DNA-dir_RNA_pol_insert,pfam_RBP11-like_dimer,superfamily_RBP11-like_dimer,superfamily_DNA-dir_RNA_pol_insert,smart_DNA-dir_RNA_pol_RpoA/D/Rpb3	pfam_DNA-dir_RNA_pol_insert,pfam_RBP11-like_dimer,superfamily_RBP11-like_dimer,superfamily_DNA-dir_RNA_pol_insert,smart_DNA-dir_RNA_pol_RpoA/D/Rpb3	-	no_errors	POLR1C	HGNC	ENSG00000171453	tier1			36	0	0.00	28	7	20.00
POLRMT	0	genome.wustl.edu	37	19	621120	621120	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	621120	621120	G	A	SNP	POLRMT	ENST00000588649	human	ensembl	74_37	-1	known	missense	c.2578	p.R860C	0.981	pfam_DNA-dir_Rpol_phage-type	pfam_DNA-dir_Rpol_phage-type	-	no_errors	POLRMT	HGNC	ENSG00000099821	tier1	-	-	36	0	0.00	57	41	41.41
POMGNT1	0	genome.wustl.edu	37	1	46659217	46659217	+	RNA	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	46659217	46659217	C	-	DEL	POMGNT1	ENST00000477114	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	POMGNT1	HGNC	ENSG00000085998	tier1			16	0	0.00	26	6	18.75
POMP	0	genome.wustl.edu	37	13	29238658	29238658	+	Silent	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	29238658	29238658	G	T	SNP	POMP	ENST00000380842	human	ensembl	74_37	+1	known	silent	c.114	p.V38	1.000	pfam_UMP1	pfam_UMP1	-	no_errors	POMP	HGNC	ENSG00000132963	tier1	-	-	31	0	0.00	26	19	42.22
POR	0	genome.wustl.edu	37	7	75609955	75609955	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	75609955	75609955	C	-	DEL	POR	ENST00000450476	human	ensembl	74_37	+1	known	frame_shift_del	c.128	p.P44fs	0.424	pfscan_Flavodoxin/NO_synth	pfam_FAD-binding_1,pfam_OxRdtase_FAD/NAD-bd,pfam_Flavodoxin/NO_synth,superfamily_Riboflavin_synthase-like_b-brl,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	POR	HGNC	ENSG00000127948	tier1			24	0	0.00	23	10	30.30
POTEM	0	genome.wustl.edu	37	14	20002279	20002279	+	Silent	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	20002279	20002279	C	A	SNP	POTEM	ENST00000547848	human	ensembl	74_37	-1	known	silent	c.1143	p.L381	0.041	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEM	HGNC	ENSG00000187537	tier1	-	-	80	0	0.00	148	40	21.28
POU2F1	0	genome.wustl.edu	37	1	167385179	167385180	+	RNA	DEL	AA	AA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	167385179	167385180	AA	-	DEL	POU2F1	ENST00000367865	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.090:0.002	-	-	-	no_errors	POU2F1	HGNC	ENSG00000143190	tier1			40	0	0.00	46	10	17.86
POU3F2	0	genome.wustl.edu	37	6	99283509	99283509	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	99283509	99283509	G	A	SNP	POU3F2	ENST00000328345	human	ensembl	74_37	+1	known	missense	c.760	p.A254T	0.963	pirsf_Transcription_factor_POU	pirsf_Transcription_factor_POU,pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F2	HGNC	ENSG00000184486				21	0	0.00	19	12	38.71
POU3F4	0	genome.wustl.edu	37	X	82763400	82763400	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	82763400	82763400	C	T	SNP	POU3F4	ENST00000373200	human	ensembl	74_37	+1	known	missense	c.68	p.A23V	0.998	pirsf_Transcription_factor_POU	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pirsf_Transcription_factor_POU,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F4	HGNC	ENSG00000196767	tier1	-	-	22	0	0.00	23	24	51.06
POU5F2	0	genome.wustl.edu	37	5	93076993	93076993	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	93076993	93076993	G	A	SNP	POU5F2	ENST00000510627	human	ensembl	74_37	-1	known	nonsense	c.277	p.R93*	0.002	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU5F2	HGNC	ENSG00000248483	tier1	-	-	22	0	0.00	7	21	75.00
PPFIA2	0	genome.wustl.edu	37	12	81671195	81671195	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	81671195	81671195	T	-	DEL	PPFIA2	ENST00000333447	human	ensembl	74_37	-1	known	frame_shift_del	c.3175	p.R1059fs	1.000	superfamily_SAM/pointed,smart_SAM	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_tRNA-bd_arm,smart_SAM,pfscan_SAM	-	no_errors	PPFIA2	HGNC	ENSG00000139220	tier1			27	0	0.00	19	5	20.83
PPFIA4	0	genome.wustl.edu	37	1	203008166	203008166	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	203008166	203008166	G	-	DEL	PPFIA4	ENST00000367240	human	ensembl	74_37	+1	novel	frame_shift_del	c.30	p.D12fs	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_Prefoldin,smart_SAM,pfscan_SAM	-	no_errors	PPFIA4	HGNC	ENSG00000143847	tier1			21	0	0.00	29	10	25.64
PPM1F	0	genome.wustl.edu	37	22	22287853	22287853	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	22287853	22287853	G	A	SNP	PPM1F	ENST00000263212	human	ensembl	74_37	-1	known	silent	c.657	p.R219	0.093	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1F	HGNC	ENSG00000100034	tier1	-	-	21	0	0.00	25	23	47.92
PPP1R12B	0	genome.wustl.edu	37	1	202407190	202407190	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	202407190	202407190	T	0	DEL	PPP1R12B	ENST00000480184	human	ensembl	74_37	+1	novel	frame_shift_del	c.1496	p.F502fs	0.041	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PPP1R12B	HGNC	ENSG00000077157				17	0	0.00	8	5	38.46
PPP1R21	0	genome.wustl.edu	37	2	48686995	48686995	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	48686995	48686995	G	A	SNP	PPP1R21	ENST00000294952	human	ensembl	74_37	+1	known	missense	c.478	p.G160S	1.000	NULL	pfam_KLRAQ/TTKRSYEDQ_C,pfam_Unchr_KLRAQ/TTKRSYEDQ_N,superfamily_Ferritin-like_SF	-	no_errors	PPP1R21	HGNC	ENSG00000162869	tier1	rs142054593	-	25	0	0.00	55	10	15.38
PRAM1	0	genome.wustl.edu	37	19	8563644	8563644	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	8563644	8563644	G	A	SNP	PRAM1	ENST00000423345	human	ensembl	74_37	-1	known	missense	c.1048	p.R350C	0.000	NULL	superfamily_SH3_domain	-	no_errors	PRAM1	HGNC	ENSG00000133246	tier1	-	-	46	0	0.00	47	24	33.80
PRDM1	0	genome.wustl.edu	37	6	106553730	106553730	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	106553730	106553730	G	A	SNP	PRDM1	ENST00000369096	human	ensembl	74_37	+1	known	silent	c.1695	p.P565	0.157	pirsf_Znf_PRDM1	pfam_Znf_C2H2,pfam_SET_dom,smart_SET_dom,smart_Znf_C2H2-like,pirsf_Znf_PRDM1,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM1	HGNC	ENSG00000057657	tier1	-	-	15	0	0.00	17	9	33.33
PRDM10	0	genome.wustl.edu	37	11	129812346	129812346	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	129812346	129812346	T	-	DEL	PRDM10	ENST00000358825	human	ensembl	74_37	-1	known	frame_shift_del	c.941	p.N314fs	0.999	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PRDM10	HGNC	ENSG00000170325	tier1			61	0	0.00	48	32	40.00
PRG2	0	genome.wustl.edu	37	11	57155247	57155247	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	57155247	57155247	C	T	SNP	PRG2	ENST00000311862	human	ensembl	74_37	-1	known	missense	c.590	p.C197Y	0.955	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_Eosinophil_major_basic	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_Eosinophil_major_basic	-	no_errors	PRG2	HGNC	ENSG00000186652				57	0	0.00	70	6	7.89
PRICKLE2-AS3	0	genome.wustl.edu	37	3	64184686	64184686	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	64184686	64184686	T	-	DEL	PRICKLE2-AS3	ENST00000473434	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.222	-	-	-	no_errors	PRICKLE2-AS3	HGNC	ENSG00000226017	tier1			9	0	0.00	9	4	30.77
PRKACA	0	genome.wustl.edu	37	19	14208488	14208488	+	Splice_Site	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	14208488	14208488	T	C	SNP	PRKACA	ENST00000308677	human	ensembl	74_37	-1	known	splice_site	c.547-2	e7-2	1.000	-	-	-	no_errors	PRKACA	HGNC	ENSG00000072062	tier1	-	-	32	0	0.00	38	26	40.62
PRKCI	0	genome.wustl.edu	37	3	169988209	169988209	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	169988209	169988209	C	T	SNP	PRKCI	ENST00000295797	human	ensembl	74_37	+1	known	missense	c.451	p.R151C	1.000	pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pirsf_PKC_zeta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_DAG/PE-bd	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_PKC_zeta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKCI	HGNC	ENSG00000163558	tier1	-	-	21	0	0.00	26	11	29.73
PRKDC	0	genome.wustl.edu	37	8	48805866	48805866	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	48805866	48805866	C	-	DEL	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	frame_shift_del	c.3680	p.G1227fs	0.938	NULL	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1			51	0	0.00	186	45	19.48
PRNP	0	genome.wustl.edu	37	20	4679939	4679939	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	4679939	4679939	C	T	SNP	PRNP	ENST00000379440	human	ensembl	74_37	+1	known	missense	c.73	p.R25C	0.998	pfam_Prion_N_dom,smart_Prion	pfam_Prion/Doppel_prot_b-ribbon_dom,pfam_Prion_N_dom,superfamily_Prion/Doppel_prot_b-ribbon_dom,smart_Prion,prints_Prion	-	no_errors	PRNP	HGNC	ENSG00000171867	tier1	-	-	19	0	0.00	43	11	20.37
PRR11	0	genome.wustl.edu	37	17	57247171	57247171	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	57247171	57247171	A	-	DEL	PRR11	ENST00000262293	human	ensembl	74_37	+1	known	frame_shift_del	c.58	p.E23fs	0.749	NULL	NULL	-	no_errors	PRR11	HGNC	ENSG00000068489	tier1			22	0	0.00	9	19	67.86
PRR5L	0	genome.wustl.edu	37	11	36485195	36485196	+	RNA	DEL	AA	AA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	36485195	36485196	AA	-	DEL	PRR5L	ENST00000389693	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.022:0.017	-	-	-	no_errors	PRR5L	HGNC	ENSG00000135362	tier1			16	0	0.00	7	11	61.11
PRRC2B	0	genome.wustl.edu	37	9	134350640	134350640	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	134350640	134350640	C	-	DEL	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	frame_shift_del	c.3124	p.M1044fs	0.992	NULL	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723	tier1			14	0	0.00	6	10	62.50
PRRC2B	0	genome.wustl.edu	37	9	134351550	134351551	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	134351550	134351551	TG	-	DEL	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	frame_shift_del	c.4034_4035	p.C1346fs	0.295:0.237	NULL	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723	tier1			19	0	0.00	34	5	12.82
PRSS36	0	genome.wustl.edu	37	16	31150582	31150582	+	Silent	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	31150582	31150582	G	T	SNP	PRSS36	ENST00000268281	human	ensembl	74_37	-1	known	silent	c.2445	p.P815	0.000	pirsf_Pept_S1A_polyserase-2	pirsf_Pept_S1A_polyserase-2,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	PRSS36	HGNC	ENSG00000178226	tier1	-	-	20	0	0.00	29	10	25.64
PRSS36	0	genome.wustl.edu	37	16	31151942	31151942	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	31151942	31151942	G	-	DEL	PRSS36	ENST00000268281	human	ensembl	74_37	-1	known	frame_shift_del	c.2038	p.L680fs	0.448	pirsf_Pept_S1A_polyserase-2,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Pept_S1A_polyserase-2,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	PRSS36	HGNC	ENSG00000178226	tier1			16	0	0.00	19	5	20.83
PRTG	0	genome.wustl.edu	37	15	55965576	55965576	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	55965576	55965576	G	A	SNP	PRTG	ENST00000389286	human	ensembl	74_37	-1	known	silent	c.1845	p.S615	0.935	pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	PRTG	HGNC	ENSG00000166450	tier1	-	-	24	0	0.00	19	18	48.65
PSIP1	0	genome.wustl.edu	37	9	15472612	15472612	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	15472612	15472612	A	-	DEL	PSIP1	ENST00000495873	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PSIP1	HGNC	ENSG00000164985	tier1			28	0	0.00	15	32	68.09
PSMD1	0	genome.wustl.edu	37	2	231931656	231931656	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	231931656	231931656	A	G	SNP	PSMD1	ENST00000308696	human	ensembl	74_37	+1	known	missense	c.341	p.E114G	1.000	superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn2	pfam_Proteasome/cyclosome_rpt,superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn2	-	no_errors	PSMD1	HGNC	ENSG00000173692	tier1	-	-	24	0	0.00	17	8	32.00
PSMD12	0	genome.wustl.edu	37	17	65337163	65337163	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	65337163	65337163	G	A	SNP	PSMD12	ENST00000356126	human	ensembl	74_37	-1	known	silent	c.1167	p.S389	0.976	pfam_PCI_dom,smart_PCI_dom	pfam_PCI_dom,smart_PCI_dom	-	no_errors	PSMD12	HGNC	ENSG00000197170	tier1	-	-	31	0	0.00	19	9	32.14
PSME2	0	genome.wustl.edu	37	14	24615778	24615778	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	24615778	24615778	A	G	SNP	PSME2	ENST00000216802	human	ensembl	74_37	-1	known	missense	c.13	p.C5R	0.991	NULL	pfam_Proteasome_activ_pa28_C,pfam_Proteasome_activ_pa28_N,superfamily_Proteasome_activ_pa28	-	no_errors	PSME2	HGNC	ENSG00000100911				26	0	0.00	40	3	6.98
PSPH	0	genome.wustl.edu	37	7	56079283	56079283	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	56079283	56079283	A	-	DEL	PSPH	ENST00000459834	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PSPH	HGNC	ENSG00000146733	tier1			8	0	0.00	7	7	50.00
PTCH1	0	genome.wustl.edu	37	9	98211549	98211549	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	98211549	98211549	G	-	DEL	PTCH1	ENST00000331920	human	ensembl	74_37	-1	known	frame_shift_del	c.3606	p.S1203fs	0.012	tigrfam_TM_rcpt_patched	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH1	HGNC	ENSG00000185920	tier1			44	0	0.00	43	10	18.87
PTGDS	0	genome.wustl.edu	37	9	139873716	139873716	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	139873716	139873716	C	T	SNP	PTGDS	ENST00000224167	human	ensembl	74_37	+1	known	missense	c.296	p.A99V	0.000	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_PstgldnD_synth	-	no_errors	PTGDS	HGNC	ENSG00000107317	tier1	-	-	44	0	0.00	58	37	38.95
PTHLH	0	genome.wustl.edu	37	12	28114898	28114898	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	28114898	28114898	T	-	DEL	PTHLH	ENST00000354417	human	ensembl	74_37	-1	known	frame_shift_del	c.557	p.K186fs	0.135	NULL	pfam_PTH/PTH-rel,smart_PTH/PTH-rel	-	no_errors	PTHLH	HGNC	ENSG00000087494	tier1			22	0	0.00	18	9	33.33
PTPRF	0	genome.wustl.edu	37	1	44054632	44054632	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	44054632	44054632	C	T	SNP	PTPRF	ENST00000359947	human	ensembl	74_37	+1	known	silent	c.910	p.L304	0.991	pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRF	HGNC	ENSG00000142949	tier1	-	-	40	0	0.00	72	24	25.00
PTPRU	0	genome.wustl.edu	37	1	29641996	29641996	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	29641996	29641996	C	A	SNP	PTPRU	ENST00000345512	human	ensembl	74_37	+1	known	missense	c.3370	p.R1124S	0.998	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRU	HGNC	ENSG00000060656	tier1	-	-	48	0	0.00	18	40	68.97
PVRL1	0	genome.wustl.edu	37	11	119535677	119535678	+	In_Frame_Ins	INS	-	-	CCT			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	119535677	119535678	-	CCT	INS	PVRL1	ENST00000264025	human	ensembl	74_37	-1	known	in_frame_ins	c.1334_1333	p.445in_frame_insE	0.902:0.989	NULL	pfam_CD80_C2-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PVRL1	HGNC	ENSG00000110400	tier1			17	0	0.00	34	7	17.07
PYCR2	0	genome.wustl.edu	37	1	226111805	226111805	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	226111805	226111805	G	C	SNP	PYCR2	ENST00000343818	human	ensembl	74_37	-1	known	missense	c.6	p.S2R	1.000	pirsf_Pyrroline-COOH_reductase	superfamily_6-PGluconate_DH_C-like,pirsf_Pyrroline-COOH_reductase,tigrfam_Pyrroline-COOH_reductase	-	no_errors	PYCR2	HGNC	ENSG00000143811	tier1	-	-	8	0	0.00	10	6	37.50
RAB12	0	genome.wustl.edu	37	18	8636357	8636358	+	Splice_Site	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	8636357	8636358	-	A	INS	RAB12	ENST00000329286	human	ensembl	74_37	+1	known	splice_site_ins	c.621+2_621+1	e5+2	1.000:0.962	-	-	-	no_errors	RAB12	HGNC	ENSG00000206418	tier1			19	0	0.00	15	12	44.44
RAB13	0	genome.wustl.edu	37	1	153955602	153955602	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	153955602	153955602	A	-	DEL	RAB13	ENST00000462680	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.029	-	-	-	no_errors	RAB13	HGNC	ENSG00000143545	tier1			11	0	0.00	16	5	23.81
RAB25	0	genome.wustl.edu	37	1	156035905	156035905	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	156035905	156035905	C	T	SNP	RAB25	ENST00000463614	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RAB25	HGNC	ENSG00000132698	tier1	-	-	38	0	0.00	24	22	47.83
RAB2B	0	genome.wustl.edu	37	14	21936607	21936607	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	21936607	21936607	G	A	SNP	RAB2B	ENST00000397762	human	ensembl	74_37	-1	known	missense	c.271	p.R91C	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB2B	HGNC	ENSG00000129472	tier1	-	-	25	0	0.00	27	24	47.06
RAB3GAP2	0	genome.wustl.edu	37	1	220327392	220327392	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	220327392	220327392	T	-	DEL	RAB3GAP2	ENST00000358951	human	ensembl	74_37	-1	known	frame_shift_del	c.3563	p.N1188fs	1.000	NULL	superfamily_WD40_repeat_dom	-	no_errors	RAB3GAP2	HGNC	ENSG00000118873	tier1			35	0	0.00	37	13	26.00
RALY	0	genome.wustl.edu	37	20	32660107	32660107	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	32660107	32660107	A	G	SNP	RALY	ENST00000246194	human	ensembl	74_37	+1	known	missense	c.227	p.N76S	1.000	pfam_RRM_dom,smart_RRM_dom,pirsf_hnRNP_C_Raly,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pirsf_hnRNP_C_Raly,pfscan_RRM_dom	-	no_errors	RALY	HGNC	ENSG00000125970	tier1	-	-	16	0	0.00	45	11	19.64
RALYL	0	genome.wustl.edu	37	8	85774569	85774569	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	85774569	85774569	G	A	SNP	RALYL	ENST00000521268	human	ensembl	74_37	+1	known	missense	c.452	p.R151H	0.995	pirsf_hnRNP_C_Raly	pfam_RRM_dom,smart_RRM_dom,pirsf_hnRNP_C_Raly,pfscan_RRM_dom	-	no_errors	RALYL	HGNC	ENSG00000184672	tier1	-	-	34	0	0.00	53	28	34.57
RAPGEF2	0	genome.wustl.edu	37	4	160260486	160260486	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	160260486	160260486	C	T	SNP	RAPGEF2	ENST00000264431	human	ensembl	74_37	+1	known	silent	c.2031	p.D677	0.969	pfam_Ras-assoc,superfamily_Ras_GEF_dom,smart_Ras-assoc,pfscan_Ras-assoc	pfam_RasGRF_CDC25,pfam_Ras-assoc,pfam_Ras-like_Gua-exchang_fac_N,pfam_PDZ,pfam_cNMP-bd_dom,superfamily_Ras_GEF_dom,superfamily_PDZ,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_PDZ,smart_Ras-assoc,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_PDZ,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF2	HGNC	ENSG00000109756	tier1	-	-	34	0	0.00	21	7	25.00
RAPGEF4	0	genome.wustl.edu	37	2	173679337	173679337	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	173679337	173679337	T	-	DEL	RAPGEF4	ENST00000464976	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RAPGEF4	HGNC	ENSG00000091428	tier1			59	0	0.00	77	33	30.00
RARRES3	0	genome.wustl.edu	37	11	63313709	63313709	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	63313709	63313709	A	-	DEL	RARRES3	ENST00000255688	human	ensembl	74_37	+1	known	frame_shift_del	c.476	p.A162fs	0.001	NULL	pfam_LRAT-like_dom	-	no_errors	RARRES3	HGNC	ENSG00000133321	tier1			46	0	0.00	46	31	40.26
RASSF5	0	genome.wustl.edu	37	1	206762574	206762574	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	206762574	206762574	A	-	DEL	RASSF5	ENST00000481486	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.036	-	-	-	no_errors	RASSF5	HGNC	ENSG00000136653	tier1			64	0	0.00	47	15	24.19
RBM12B	0	genome.wustl.edu	37	8	94746149	94746149	+	Silent	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	94746149	94746149	G	T	SNP	RBM12B	ENST00000399300	human	ensembl	74_37	-1	known	silent	c.2490	p.P830	0.971	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM12B	HGNC	ENSG00000183808	tier1	-	-	38	0	0.00	49	38	43.68
RBMS1	0	genome.wustl.edu	37	2	161130971	161130971	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	161130971	161130971	T	-	DEL	RBMS1	ENST00000474820	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.068	-	-	-	no_errors	RBMS1	HGNC	ENSG00000153250	tier1			20	0	0.00	21	5	19.23
RBP3	0	genome.wustl.edu	37	10	48390416	48390416	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	48390416	48390416	G	A	SNP	RBP3	ENST00000224600	human	ensembl	74_37	-1	known	silent	c.462	p.H154	0.000	pfam_Interphotoreceptor_retinol-bd,smart_Interphotoreceptor_retinol-bd	pfam_Interphotoreceptor_retinol-bd,pfam_Interphotorcpt_retinol-bd_N,smart_Interphotoreceptor_retinol-bd	-	no_errors	RBP3	HGNC	ENSG00000107618	tier1	-	-	21	0	0.00	29	7	19.44
RBPJL	0	genome.wustl.edu	37	20	43945485	43945485	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	43945485	43945485	C	A	SNP	RBPJL	ENST00000343694	human	ensembl	74_37	+1	known	missense	c.1440	p.S480R	0.665	NULL	pfam_Beta-trefoil_DNA-bd_dom,pfam_LAG1_DNA-bd,superfamily_Beta-trefoil_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set	-	no_errors	RBPJL	HGNC	ENSG00000124232	tier1	-	-	53	0	0.00	76	61	44.53
RECQL	0	genome.wustl.edu	37	12	21623237	21623237	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	21623237	21623237	T	0	DEL	RECQL	ENST00000421138	human	ensembl	74_37	-1	known	frame_shift_del	c.1841	p.K614fs	0.018	NULL	pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_RQC_domain,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL	HGNC	ENSG00000004700				55	0	0.00	40	14	25.93
RECQL5	0	genome.wustl.edu	37	17	73623721	73623723	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	73623721	73623723	TCT	-	DEL	RECQL5	ENST00000317905	human	ensembl	74_37	-1	known	in_frame_del	c.2857_2855	p.K952in_frame_del	0.000:0.005:0.052	NULL	pfam_RecQ_helicase-like_5,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL5	HGNC	ENSG00000108469	tier1			11	0	0.00	24	10	29.41
REN	0	genome.wustl.edu	37	1	204135375	204135377	+	In_Frame_Del	DEL	AGC	AGC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AGC	AGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	204135375	204135377	AGC	-	DEL	REN	ENST00000272190	human	ensembl	74_37	-1	known	in_frame_del	c.47_45	p.L16in_frame_del	0.984:0.987:0.989	superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,pfam_Aspartic_peptidase_N,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	-	no_errors	REN	HGNC	ENSG00000143839	tier1			52	0	0.00	58	9	13.43
REV3L	0	genome.wustl.edu	37	6	111694984	111694984	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	111694984	111694984	G	C	SNP	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	missense	c.4574	p.S1525C	1.000	superfamily_RNaseH-like_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413	tier1	-	-	64	0	0.00	59	22	27.16
RHBDL1	0	genome.wustl.edu	37	16	727386	727386	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	727386	727386	C	T	SNP	RHBDL1	ENST00000219551	human	ensembl	74_37	+1	known	missense	c.881	p.A294V	1.000	pfam_Peptidase_S54_rhomboid_dom,pirsf_Peptidase_S54_rhomboid_met	pfam_Peptidase_S54_rhomboid_dom,pirsf_Peptidase_S54_rhomboid_met	-	no_errors	RHBDL1	HGNC	ENSG00000103269	tier1	-	-	42	0	0.00	26	29	50.88
RHOBTB1	0	genome.wustl.edu	37	10	62647970	62647970	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	62647970	62647970	C	A	SNP	RHOBTB1	ENST00000337910	human	ensembl	74_37	-1	known	missense	c.1456	p.D486Y	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,superfamily_BTB/POZ_fold,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_BTB/POZ-like,pfscan_BTB/POZ-like,prints_Small_GTPase	-	no_errors	RHOBTB1	HGNC	ENSG00000072422	tier1	-	-	39	0	0.00	21	22	51.16
RHOJ	0	genome.wustl.edu	37	14	63671516	63671516	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	63671516	63671516	C	T	SNP	RHOJ	ENST00000557133	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	RHOJ	HGNC	ENSG00000126785	tier1	-	-	12	0	0.00	4	11	73.33
RIC3	0	genome.wustl.edu	37	11	8132633	8132633	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	8132633	8132633	C	T	SNP	RIC3	ENST00000309737	human	ensembl	74_37	-1	known	missense	c.722	p.R241H	0.219	NULL	NULL	-	no_errors	RIC3	HGNC	ENSG00000166405	tier1	-	-	33	0	0.00	25	7	21.88
RIC3	0	genome.wustl.edu	37	11	8159967	8159967	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	8159967	8159967	A	-	DEL	RIC3	ENST00000524799	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RIC3	HGNC	ENSG00000166405	tier1			19	0	0.00	11	14	56.00
RICTOR	0	genome.wustl.edu	37	5	38954826	38954826	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	38954826	38954826	T	-	DEL	RICTOR	ENST00000503698	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RICTOR	HGNC	ENSG00000164327	tier1			21	0	0.00	38	10	20.83
RIF1	0	genome.wustl.edu	37	2	152293790	152293790	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	152293790	152293790	T	-	DEL	RIF1	ENST00000243326	human	ensembl	74_37	+1	known	frame_shift_del	c.1408	p.S472fs	1.000	NULL	pfam_Rif1_N,superfamily_ARM-type_fold	-	no_errors	RIF1	HGNC	ENSG00000080345	tier1			41	0	0.00	37	22	37.29
RIMBP2	0	genome.wustl.edu	37	12	130898732	130898732	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	130898732	130898732	T	C	SNP	RIMBP2	ENST00000261655	human	ensembl	74_37	-1	known	missense	c.2590	p.M864V	1.000	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709	tier1	-	-	37	0	0.00	33	25	43.10
RIMS2	0	genome.wustl.edu	37	8	104933054	104933054	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	104933054	104933054	A	-	DEL	RIMS2	ENST00000501515	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.054	-	-	-	no_errors	RIMS2	HGNC	ENSG00000176406	tier1			10	0	0.00	26	3	10.34
RIOK1	0	genome.wustl.edu	37	6	7404247	7404247	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	7404247	7404247	G	T	SNP	RIOK1	ENST00000379834	human	ensembl	74_37	+1	known	missense	c.841	p.G281C	1.000	pfam_RIO-like_kinase,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_RIO_kinase,pirsf_Ser/Thr_kinase_Rio1	pfam_RIO-like_kinase,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_RIO_kinase,pirsf_Ser/Thr_kinase_Rio1	-	no_errors	RIOK1	HGNC	ENSG00000124784	tier1	-	-	65	0	0.00	31	13	29.55
RN7SKP228	0	genome.wustl.edu	37	7	12916462	12916462	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	12916462	12916462	C	T	SNP	RN7SKP228	ENST00000411042	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RN7SKP228	HGNC	ENSG00000222974	tier1	-	-	8	0	0.00	4	6	60.00
RNF10	0	genome.wustl.edu	37	12	120984267	120984267	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	120984267	120984267	A	-	DEL	RNF10	ENST00000413266	human	ensembl	74_37	+1	known	frame_shift_del	c.217	p.N74fs	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF10	HGNC	ENSG00000022840	tier1			26	0	0.00	17	9	34.62
RNF145	0	genome.wustl.edu	37	5	158630642	158630642	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	158630642	158630642	T	-	DEL	RNF145	ENST00000518802	human	ensembl	74_37	-1	known	frame_shift_del	c.74	p.K25fs	0.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF145	HGNC	ENSG00000145860	tier1			23	0	0.00	21	9	30.00
RNF19A	0	genome.wustl.edu	37	8	101277003	101277003	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	101277003	101277003	C	T	SNP	RNF19A	ENST00000341084	human	ensembl	74_37	-1	known	missense	c.1202	p.R401H	1.000	NULL	pfam_Znf_C6HC,smart_Znf_RING,smart_Znf_C6HC,pfscan_Znf_RING	-	no_errors	RNF19A	HGNC	ENSG00000034677	tier1	rs138968684	-	27	0	0.00	59	21	26.25
RNF213	0	genome.wustl.edu	37	17	78360569	78360569	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	78360569	78360569	C	A	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	missense	c.14800	p.L4934I	0.998	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821	tier1	-	-	22	0	0.00	33	10	23.26
RNF31	0	genome.wustl.edu	37	14	24621199	24621199	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	24621199	24621199	C	T	SNP	RNF31	ENST00000324103	human	ensembl	74_37	+1	known	missense	c.2128	p.R710W	1.000	NULL	pfam_PUB_domain,pfam_Znf_C6HC,superfamily_UBA-like,superfamily_DEATH-like_dom,superfamily_Znf_FYVE_PHD,smart_Znf_RanBP2,smart_Znf_C6HC,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RanBP2	-	no_errors	RNF31	HGNC	ENSG00000092098	tier1	-	-	35	0	0.00	57	11	16.18
RNF32	0	genome.wustl.edu	37	7	156437370	156437370	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	156437370	156437370	A	-	DEL	RNF32	ENST00000317955	human	ensembl	74_37	+1	known	frame_shift_del	c.193	p.T67fs	0.451	NULL	pfam_Znf_C3HC4_RING-type,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Znf_RING,pfscan_IQ_motif_EF-hand-BS,pfscan_Znf_RING	-	no_errors	RNF32	HGNC	ENSG00000105982	tier1			16	0	0.00	7	5	41.67
RNF4	0	genome.wustl.edu	37	4	2514166	2514168	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	2514166	2514168	AAG	0	DEL	RNF4	ENST00000314289	human	ensembl	74_37	+1	known	in_frame_del	c.216_218	p.R75in_frame_del	0.165:0.148:0.116	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF4	HGNC	ENSG00000063978				32	0	0.00	69	8	10.39
RNF43	0	genome.wustl.edu	37	17	56440667	56440667	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	56440667	56440667	A	G	SNP	RNF43	ENST00000407977	human	ensembl	74_37	-1	known	missense	c.551	p.V184A	1.000	NULL	pfam_Znf_C3HC4_RING-type,superfamily_PAS,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF43	HGNC	ENSG00000108375	tier1	-	-	34	0	0.00	45	16	25.81
RNU6-661P	0	genome.wustl.edu	37	5	61739107	61739108	+	RNA	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	61739107	61739108	-	A	INS	RNU6-661P	ENST00000362409	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.007	-	-	-	no_errors	RNU6-661P	HGNC	ENSG00000199279	tier1			13	0	0.00	5	7	58.33
ROM1	0	genome.wustl.edu	37	11	62381084	62381084	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	62381084	62381084	G	-	DEL	ROM1	ENST00000278833	human	ensembl	74_37	+1	known	frame_shift_del	c.331	p.L114fs	0.023	pfam_Tetraspanin/Peripherin,prints_Peripherin/rom-1	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Peripherin/rom-1	-	no_errors	ROM1	HGNC	ENSG00000149489	tier1			69	0	0.00	75	42	35.90
RPE65	0	genome.wustl.edu	37	1	68903930	68903931	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	68903930	68903931	-	T	INS	RPE65	ENST00000262340	human	ensembl	74_37	-1	known	frame_shift_ins	c.1068_1067	p.N356fs	0.995:1.000	pfam_Carotenoid_Oase	pfam_Carotenoid_Oase	-	no_errors	RPE65	HGNC	ENSG00000116745	tier1			48	0	0.00	46	20	30.30
RPL12P38	0	genome.wustl.edu	37	17	58512851	58512851	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	58512851	58512851	G	A	SNP	RPL12P38	ENST00000588627	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	RPL12P38	HGNC	ENSG00000213228				17	0	0.00	19	6	24.00
RPL13	0	genome.wustl.edu	37	16	89629407	89629407	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	89629407	89629407	G	-	DEL	RPL13	ENST00000311528	human	ensembl	74_37	+1	known	frame_shift_del	c.593	p.R198fs	1.000	NULL	pfam_Ribosomal_L13e	-	no_errors	RPL13	HGNC	ENSG00000167526	tier1			23	0	0.00	30	9	23.08
RPL18A	0	genome.wustl.edu	37	19	17972276	17972276	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	17972276	17972276	G	T	SNP	RPL18A	ENST00000222247	human	ensembl	74_37	+1	known	missense	c.193	p.G65W	0.999	pfam_Ribosomal_L18a/LX	pfam_Ribosomal_L18a/LX	-	no_errors	RPL18A	HGNC	ENSG00000105640	tier1	-	-	12	0	0.00	11	6	35.29
RPL22	0	genome.wustl.edu	37	1	6257785	6257785	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	6257785	6257785	T	-	DEL	RPL22	ENST00000234875	human	ensembl	74_37	-1	known	frame_shift_del	c.44	p.K15fs	1.000	pfam_Ribosomal_L22e	pfam_Ribosomal_L22e	-	no_errors	RPL22	HGNC	ENSG00000116251	tier1			25	0	0.00	15	9	37.50
RPL41	0	genome.wustl.edu	37	12	56510435	56510435	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	56510435	56510435	T	-	DEL	RPL41	ENST00000358888	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPL41	HGNC	ENSG00000229117	tier1			25	0	0.00	28	7	20.00
RPLP0P2	0	genome.wustl.edu	37	11	61405179	61405179	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	61405179	61405179	A	-	DEL	RPLP0P2	ENST00000496593	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.975	-	-	-	no_errors	RPLP0P2	HGNC	ENSG00000243742	tier1			32	0	0.00	21	7	25.00
RPS10P7	0	genome.wustl.edu	37	1	201489719	201489719	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	201489719	201489719	A	-	DEL	RPS10P7	ENST00000441932	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.056	-	-	-	no_errors	RPS10P7	HGNC	ENSG00000223396	tier1			11	0	0.00	3	5	62.50
RPS26	0	genome.wustl.edu	37	12	56436335	56436336	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	56436335	56436336	AT	-	DEL	RPS26	ENST00000356464	human	ensembl	74_37	+1	known	frame_shift_del	c.130_131	p.I44fs	1.000:0.998	pfam_Ribosomal_S26e	pfam_Ribosomal_S26e	-	no_errors	RPS26	HGNC	ENSG00000197728	tier1			50	0	0.00	67	33	33.00
RPS6KA5	0	genome.wustl.edu	37	14	91366489	91366489	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	91366489	91366489	T	-	DEL	RPS6KA5	ENST00000261991	human	ensembl	74_37	-1	known	frame_shift_del	c.1342	p.S448fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_Aminoglycoside_PTrfase,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_AGC-kinase_C,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	-	no_errors	RPS6KA5	HGNC	ENSG00000100784	tier1			30	0	0.00	43	60	58.25
RRP7A	0	genome.wustl.edu	37	22	42910203	42910203	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	42910203	42910203	G	A	SNP	RRP7A	ENST00000323013	human	ensembl	74_37	-1	known	silent	c.666	p.S222	1.000	NULL	NULL	-	no_errors	RRP7A	HGNC	ENSG00000189306	tier1	-	-	41	0	0.00	61	27	30.68
RRP7B	0	genome.wustl.edu	37	22	42972025	42972025	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	42972025	42972025	G	A	SNP	RRP7B	ENST00000357802	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RRP7B	HGNC	ENSG00000182841				72	0	0.00	114	7	5.79
RTKN2	0	genome.wustl.edu	37	10	63958149	63958149	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	63958149	63958149	T	-	DEL	RTKN2	ENST00000373789	human	ensembl	74_37	-1	known	frame_shift_del	c.1348	p.I450fs	1.000	NULL	pfam_Pleckstrin_homology,superfamily_HR1_rho-bd,smart_HR1_rho-bd,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	RTKN2	HGNC	ENSG00000182010	tier1			43	0	0.00	24	17	41.46
RTN2	0	genome.wustl.edu	37	19	45996513	45996513	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	45996513	45996513	G	-	DEL	RTN2	ENST00000245923	human	ensembl	74_37	-1	known	frame_shift_del	c.938	p.P313fs	0.005	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN2	HGNC	ENSG00000125744	tier1			34	0	0.00	14	11	44.00
RTN4	0	genome.wustl.edu	37	2	55252408	55252408	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	55252408	55252408	A	G	SNP	RTN4	ENST00000337526	human	ensembl	74_37	-1	known	missense	c.2827	p.S943P	0.376	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN4	HGNC	ENSG00000115310	tier1	-	-	41	0	0.00	46	6	11.54
RUNX1	0	genome.wustl.edu	37	21	36206863	36206863	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	21	36206863	36206863	C	T	SNP	RUNX1	ENST00000300305	human	ensembl	74_37	-1	known	missense	c.649	p.G217R	1.000	pirsf_TF_Runt-rel_RUNX	pfam_Runt_dom,pfam_RunxI_C_dom,superfamily_p53-like_TF_DNA-bd,pirsf_TF_Runt-rel_RUNX,pfscan_Runt_dom,prints_AML1_Runt	-	no_errors	RUNX1	HGNC	ENSG00000159216	tier1	-	-	49	0	0.00	49	24	32.88
RUNX1T1	0	genome.wustl.edu	37	8	92988144	92988144	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	92988144	92988144	C	A	SNP	RUNX1T1	ENST00000436581	human	ensembl	74_37	-1	known	missense	c.1370	p.W457L	1.000	NULL	pfam_NHR2,pfam_TAFH_NHR1,pfam_Znf_MYND,smart_TAFH_NHR1,pfscan_TAFH_NHR1,pfscan_Znf_MYND,prints_ETO,prints_MTG8	-	no_errors	RUNX1T1	HGNC	ENSG00000079102	tier1	-	-	27	0	0.00	19	50	72.46
RUNX2	0	genome.wustl.edu	37	6	45296446	45296446	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	45296446	45296446	A	-	DEL	RUNX2	ENST00000352853	human	ensembl	74_37	+1	known	frame_shift_del	c.187	p.G66fs	0.983	NULL	pfam_Runt_dom,pfam_RunxI_C_dom,superfamily_p53-like_TF_DNA-bd,pfscan_Runt_dom,prints_AML1_Runt	-	no_errors	RUNX2	HGNC	ENSG00000124813	tier1			29	0	0.00	19	10	34.48
RXFP1	0	genome.wustl.edu	37	4	159554592	159554592	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	159554592	159554592	C	T	SNP	RXFP1	ENST00000307765	human	ensembl	74_37	+1	known	missense	c.935	p.P312L	0.892	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_GPCR_Rhodpsn,pfam_Leu-rich_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Leu-rich_rpt_typical-subtyp,pfscan_LDrepeatLR_classA_rpt,pfscan_GPCR_Rhodpsn_7TM,prints_Relaxin_rcpt,prints_GPCR_Rhodpsn,prints_Gphrmn_rcpt_fam	-	no_errors	RXFP1	HGNC	ENSG00000171509	tier1	rs200427299	-	72	0	0.00	45	19	29.69
RYR1	0	genome.wustl.edu	37	19	38937180	38937180	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	38937180	38937180	C	A	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	missense	c.700	p.P234T	0.063	pfam_MIR_motif,superfamily_MIR_motif,smart_MIR_motif,pfscan_MIR_motif	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218	tier1	-	-	40	0	0.00	20	16	44.44
RYR1	0	genome.wustl.edu	37	19	39019604	39019606	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	39019604	39019606	AGG	-	DEL	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	in_frame_del	c.11048_11050	p.E3687in_frame_del	1.000:1.000:1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218	tier1			23	0	0.00	11	6	35.29
SAAL1	0	genome.wustl.edu	37	11	18103046	18103046	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	18103046	18103046	G	A	SNP	SAAL1	ENST00000524803	human	ensembl	74_37	-1	known	missense	c.1244	p.T415M	0.011	NULL	superfamily_ARM-type_fold	-	no_errors	SAAL1	HGNC	ENSG00000166788				13	0	0.00	20	3	13.04
SAFB	0	genome.wustl.edu	37	19	5653399	5653399	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	5653399	5653399	C	T	SNP	SAFB	ENST00000588852	human	ensembl	74_37	+1	known	silent	c.1494	p.D498	0.048	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SAFB	HGNC	ENSG00000160633	tier1	-	-	15	0	0.00	14	9	39.13
SBNO2	0	genome.wustl.edu	37	19	1122525	1122525	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	1122525	1122525	G	A	SNP	SBNO2	ENST00000361757	human	ensembl	74_37	-1	known	missense	c.947	p.A316V	1.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	SBNO2	HGNC	ENSG00000064932	tier1	-	-	13	0	0.00	9	5	35.71
SCAF1	0	genome.wustl.edu	37	19	50158042	50158042	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	50158042	50158042	C	-	DEL	SCAF1	ENST00000360565	human	ensembl	74_37	+1	known	frame_shift_del	c.3533	p.T1181fs	0.934	NULL	NULL	-	no_errors	SCAF1	HGNC	ENSG00000126461	tier1			11	0	0.00	4	6	60.00
SCARB1	0	genome.wustl.edu	37	12	125292390	125292390	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	125292390	125292390	G	T	SNP	SCARB1	ENST00000415380	human	ensembl	74_37	-1	known	missense	c.926	p.A309D	1.000	pfam_CD36	pfam_CD36,prints_CD36,prints_CD36_antigen	-	no_errors	SCARB1	HGNC	ENSG00000073060				34	0	0.00	57	3	5.00
SCN4B	0	genome.wustl.edu	37	11	118006753	118006754	+	RNA	DEL	GG	GG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	118006753	118006754	GG	-	DEL	SCN4B	ENST00000423160	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004:0.004	-	-	-	no_errors	SCN4B	HGNC	ENSG00000177098	tier1			8	0	0.00	12	4	25.00
SCOC	0	genome.wustl.edu	37	4	141302186	141302186	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	141302186	141302186	A	G	SNP	SCOC	ENST00000608372	human	ensembl	74_37	+1	known	silent	c.408	p.G136	0.999	pfam_DUF2205_coiled-coil	pfam_DUF2205_coiled-coil	-	no_errors	SCOC	HGNC	ENSG00000153130	tier1	-	-	31	0	0.00	28	9	24.32
SCPEP1	0	genome.wustl.edu	37	17	55058513	55058513	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	55058513	55058513	C	A	SNP	SCPEP1	ENST00000575423	human	ensembl	74_37	+1	known	missense	c.112	p.L38I	0.011	NULL	NULL	-	no_errors	SCPEP1	HGNC	ENSG00000121064	tier1	-	-	50	0	0.00	46	34	42.50
SCUBE2	0	genome.wustl.edu	37	11	9090982	9090982	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	9090982	9090982	C	A	SNP	SCUBE2	ENST00000457346	human	ensembl	74_37	-1	known	missense	c.578	p.R193M	0.931	smart_EG-like_dom	pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	SCUBE2	HGNC	ENSG00000175356	tier1	-	-	21	0	0.00	20	15	42.86
SDCBP2	0	genome.wustl.edu	37	20	1293248	1293248	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	1293248	1293248	G	A	SNP	SDCBP2	ENST00000339987	human	ensembl	74_37	-1	known	silent	c.543	p.V181	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SDCBP2	HGNC	ENSG00000125775	tier1	rs151023134	-	46	0	0.00	62	75	54.74
SDS	0	genome.wustl.edu	37	12	113831717	113831717	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	113831717	113831717	G	A	SNP	SDS	ENST00000257549	human	ensembl	74_37	-1	known	missense	c.758	p.A253V	0.294	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF	-	no_errors	SDS	HGNC	ENSG00000135094	tier1	-	-	13	0	0.00	16	12	42.86
SEC14L1	0	genome.wustl.edu	37	17	75208083	75208083	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	75208083	75208083	G	A	SNP	SEC14L1	ENST00000392476	human	ensembl	74_37	+1	known	missense	c.1663	p.V555M	1.000	superfamily_GOLD,pfscan_GOLD	pfam_PRELI/MSF1,pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,superfamily_GOLD,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,pfscan_PRELI/MSF1	-	no_errors	SEC14L1	HGNC	ENSG00000129657	tier1	-	-	27	0	0.00	29	8	21.62
SEC14L5	0	genome.wustl.edu	37	16	5061151	5061152	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	5061151	5061152	-	C	INS	SEC14L5	ENST00000251170	human	ensembl	74_37	+1	known	frame_shift_ins	c.1856_1857	p.S622fs	0.002:0.000	superfamily_GOLD,pfscan_GOLD	pfam_PRELI/MSF1,pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,superfamily_GOLD,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,pfscan_PRELI/MSF1,prints_CRAL-bd_toc_tran	-	no_errors	SEC14L5	HGNC	ENSG00000103184	tier1			48	0	0.00	78	26	25.00
SEC24A	0	genome.wustl.edu	37	5	133997018	133997018	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	133997018	133997018	G	T	SNP	SEC24A	ENST00000398844	human	ensembl	74_37	+1	known	missense	c.307	p.G103C	0.975	NULL	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom	-	no_errors	SEC24A	HGNC	ENSG00000113615	tier1	-	-	73	0	0.00	69	4	5.48
SELK	0	genome.wustl.edu	37	3	53920927	53920927	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	53920927	53920927	T	-	DEL	SELK	ENST00000541726	human	ensembl	74_37	-1	known	frame_shift_del	c.145	p.R49fs	0.878	pfam_Se_SelK/SelG	pfam_Se_SelK/SelG	-	no_errors	SELK	Uniprot_gn	ENSG00000113811	tier1			31	0	0.00	10	13	56.52
SEMA3F	0	genome.wustl.edu	37	3	50222192	50222192	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	50222192	50222192	C	T	SNP	SEMA3F	ENST00000002829	human	ensembl	74_37	+1	known	silent	c.1401	p.A467	0.135	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,smart_Ig_sub2,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3F	HGNC	ENSG00000001617	tier1	rs139236502	-	69	0	0.00	26	33	55.93
SERPINB10	0	genome.wustl.edu	37	18	61584739	61584739	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	61584739	61584739	A	-	DEL	SERPINB10	ENST00000238508	human	ensembl	74_37	+1	known	frame_shift_del	c.218	p.R76fs	0.998	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB10	HGNC	ENSG00000242550	tier1			26	0	0.00	20	8	28.57
SETD1A	0	genome.wustl.edu	37	16	30990868	30990868	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	30990868	30990868	C	T	SNP	SETD1A	ENST00000262519	human	ensembl	74_37	+1	known	missense	c.3761	p.A1254V	0.926	NULL	pfam_COMPASS_Set1_N-SET,pfam_SET_dom,pfam_RRM_dom,smart_RRM_dom,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_RRM_dom	-	no_errors	SETD1A	HGNC	ENSG00000099381	tier1	-	-	9	0	0.00	2	6	75.00
SETDB1	0	genome.wustl.edu	37	1	150917540	150917540	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	150917540	150917540	C	T	SNP	SETDB1	ENST00000271640	human	ensembl	74_37	+1	known	nonsense	c.1096	p.R366*	1.000	smart_Tudor	pfam_SET_dom,pfam_Pre-SET_dom,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Tudor,smart_Methyl_CpG_DNA-bd,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Methyl_CpG_DNA-bd,pfscan_SET_dom,pfscan_Pre-SET_dom,pfscan_Post-SET_dom	-	no_errors	SETDB1	HGNC	ENSG00000143379	tier1	-	-	82	0	0.00	117	21	15.22
SETDB1	0	genome.wustl.edu	37	1	150931756	150931756	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	150931756	150931756	G	A	SNP	SETDB1	ENST00000271640	human	ensembl	74_37	+1	known	silent	c.2433	p.Q811	1.000	smart_SET_dom,pfscan_SET_dom	pfam_SET_dom,pfam_Pre-SET_dom,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Tudor,smart_Methyl_CpG_DNA-bd,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Methyl_CpG_DNA-bd,pfscan_SET_dom,pfscan_Pre-SET_dom,pfscan_Post-SET_dom	-	no_errors	SETDB1	HGNC	ENSG00000143379	tier1	-	-	91	0	0.00	68	34	33.33
SF1	0	genome.wustl.edu	37	11	64536544	64536545	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	64536544	64536545	AC	-	DEL	SF1	ENST00000377390	human	ensembl	74_37	-1	known	frame_shift_del	c.837_836	p.C279fs	0.968:1.000	pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	pfam_KH_dom_type_1,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_KH_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_KH_dom_type_1	-	no_errors	SF1	HGNC	ENSG00000168066	tier1			38	0	0.00	58	26	30.95
SF3B2	0	genome.wustl.edu	37	11	65827296	65827296	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	65827296	65827296	C	T	SNP	SF3B2	ENST00000322535	human	ensembl	74_37	+1	known	missense	c.1445	p.A482V	0.999	pfam_DUF382	pfam_DUF382,pfam_PSP,pfam_SAP_dom,smart_SAP_dom,smart_PSP,pfscan_SAP_dom	-	no_errors	SF3B2	HGNC	ENSG00000087365	tier1	-	-	34	0	0.00	99	13	11.61
SF3B3	0	genome.wustl.edu	37	16	70590170	70590170	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	70590170	70590170	A	T	SNP	SF3B3	ENST00000302516	human	ensembl	74_37	+1	known	missense	c.1799	p.Q600L	1.000	superfamily_WD40_repeat_dom	pfam_Cleavage/polyA-sp_fac_asu_C,superfamily_WD40_repeat_dom	-	no_errors	SF3B3	HGNC	ENSG00000189091	tier1	-	-	51	0	0.00	53	46	46.46
SH2D4B	0	genome.wustl.edu	37	10	82402760	82402760	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	82402760	82402760	C	T	SNP	SH2D4B	ENST00000481537	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SH2D4B	HGNC	ENSG00000178217	tier1	-	-	37	0	0.00	36	6	14.29
SH3PXD2B	0	genome.wustl.edu	37	5	171809111	171809111	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	171809111	171809111	G	-	DEL	SH3PXD2B	ENST00000311601	human	ensembl	74_37	-1	known	frame_shift_del	c.330	p.Y111fs	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_SH3_domain,pfam_SH3_2,pfam_Phox,pfam_SH3-like_bac-type,pfam_DUF1058,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SH3PXD2B	HGNC	ENSG00000174705	tier1			17	0	0.00	8	35	81.40
SIK1	0	genome.wustl.edu	37	21	44839827	44839827	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	21	44839827	44839827	C	T	SNP	SIK1	ENST00000270162	human	ensembl	74_37	-1	known	missense	c.1031	p.R344Q	1.000	pirsf_Ser/Thr_kinase_SIK1/2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_SIK1/2,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	SIK1	HGNC	ENSG00000142178	tier1	-	-	30	0	0.00	24	12	33.33
SIRT7	0	genome.wustl.edu	37	17	79872373	79872373	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	79872373	79872373	C	T	SNP	SIRT7	ENST00000328666	human	ensembl	74_37	-1	known	missense	c.613	p.V205M	0.944	pfam_Sirtuin,pfscan_Ssirtuin_cat_dom	pfam_Sirtuin,pfscan_Ssirtuin_cat_dom	-	no_errors	SIRT7	HGNC	ENSG00000187531	tier1	-	-	26	0	0.00	32	32	50.00
SIX3	0	genome.wustl.edu	37	2	45171872	45171872	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	45171872	45171872	C	T	SNP	SIX3	ENST00000260653	human	ensembl	74_37	+1	known	silent	c.972	p.T324	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	SIX3	HGNC	ENSG00000138083	tier1	-	-	15	0	0.00	33	26	44.07
SLC12A7	0	genome.wustl.edu	37	5	1085510	1085510	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	1085510	1085510	G	A	SNP	SLC12A7	ENST00000264930	human	ensembl	74_37	-1	known	missense	c.754	p.R252C	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A7	HGNC	ENSG00000113504				26	0	0.00	114	9	7.32
SLC12A9	0	genome.wustl.edu	37	7	100424578	100424579	+	RNA	DEL	CC	CC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	100424578	100424579	CC	-	DEL	SLC12A9	ENST00000461016	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.002:0.080	-	-	-	no_errors	SLC12A9	HGNC	ENSG00000146828	tier1			14	0	0.00	21	8	27.59
SLC14A2	0	genome.wustl.edu	37	18	43248420	43248420	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	43248420	43248420	G	A	SNP	SLC14A2	ENST00000255226	human	ensembl	74_37	+1	known	missense	c.2014	p.V672I	0.856	pfam_Urea_transporter	pfam_Urea_transporter	-	no_errors	SLC14A2	HGNC	ENSG00000132874	tier1	rs145938404	-	88	0	0.00	78	20	20.41
SLC16A8	0	genome.wustl.edu	37	22	38474461	38474461	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	38474461	38474461	G	A	SNP	SLC16A8	ENST00000320521	human	ensembl	74_37	-1	known	silent	c.1449	p.S483	0.990	NULL	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	-	no_errors	SLC16A8	HGNC	ENSG00000100156	tier1	-	-	19	0	0.00	42	11	20.75
SLC25A41	0	genome.wustl.edu	37	19	6430130	6430131	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	6430130	6430131	-	C	INS	SLC25A41	ENST00000321510	human	ensembl	74_37	-1	known	frame_shift_ins	c.406_405	p.L135fs	0.009:0.003	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A41	HGNC	ENSG00000181240	tier1			30	0	0.00	63	13	17.11
SLC26A8	0	genome.wustl.edu	37	6	35944996	35944996	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	35944996	35944996	A	G	SNP	SLC26A8	ENST00000355574	human	ensembl	74_37	-1	known	silent	c.1158	p.S386	0.000	pfam_Sulph_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom	-	no_errors	SLC26A8	HGNC	ENSG00000112053	tier1	-	-	35	0	0.00	21	9	30.00
SLC29A1	0	genome.wustl.edu	37	6	44201262	44201262	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	44201262	44201262	G	A	SNP	SLC29A1	ENST00000313248	human	ensembl	74_37	+1	known	silent	c.1605	p.V535	1.000	tigrfam_Eqnu_transpt	pfam_Eqnu_transpt,superfamily_MFS_dom_general_subst_transpt,prints_Eqnu_transpt,tigrfam_Eqnu_transpt	-	no_errors	SLC29A1	HGNC	ENSG00000112759	tier1	-	-	32	0	0.00	33	14	29.79
SLC2A6	0	genome.wustl.edu	37	9	136339152	136339152	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	136339152	136339152	G	A	SNP	SLC2A6	ENST00000371899	human	ensembl	74_37	-1	known	missense	c.986	p.A329V	0.997	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A6	HGNC	ENSG00000160326	tier1	-	-	64	0	0.00	93	43	31.62
SLC2A8	0	genome.wustl.edu	37	9	130166382	130166382	+	RNA	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	130166382	130166382	C	-	DEL	SLC2A8	ENST00000485806	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC2A8	HGNC	ENSG00000136856	tier1			31	0	0.00	47	21	30.88
SLC4A1AP	0	genome.wustl.edu	37	2	27917513	27917513	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	27917513	27917513	A	G	SNP	SLC4A1AP	ENST00000326019	human	ensembl	74_37	+1	known	missense	c.2354	p.D785G	1.000	NULL	pfam_FHA_dom,pfam_dsRNA-bd_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	SLC4A1AP	HGNC	ENSG00000163798	tier1	-	-	53	0	0.00	45	20	30.30
SLC5A10	0	genome.wustl.edu	37	17	18916758	18916758	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	18916758	18916758	C	T	SNP	SLC5A10	ENST00000395647	human	ensembl	74_37	+1	known	missense	c.1066	p.R356W	1.000	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A10	HGNC	ENSG00000154025	tier1	-	-	35	0	0.00	61	47	43.52
SLC6A13	0	genome.wustl.edu	37	12	369121	369121	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	369121	369121	C	T	SNP	SLC6A13	ENST00000343164	human	ensembl	74_37	-1	known	missense	c.98	p.G33E	0.913	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_GABA_GAT2	-	no_errors	SLC6A13	HGNC	ENSG00000010379	tier1	-	-	61	0	0.00	74	55	42.64
SLC9C2	0	genome.wustl.edu	37	1	173526482	173526482	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	173526482	173526482	T	C	SNP	SLC9C2	ENST00000367714	human	ensembl	74_37	-1	known	silent	c.1212	p.Q404	0.052	pfam_Cation/H_exchanger	pfam_Cation/H_exchanger,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	SLC9C2	HGNC	ENSG00000162753	tier1	-	-	24	0	0.00	16	22	57.89
SLC9C2	0	genome.wustl.edu	37	1	173567087	173567087	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	173567087	173567087	C	A	SNP	SLC9C2	ENST00000367714	human	ensembl	74_37	-1	known	missense	c.313	p.A105S	1.000	pfam_Cation/H_exchanger	pfam_Cation/H_exchanger,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	SLC9C2	HGNC	ENSG00000162753				19	0	0.00	28	2	6.67
SLCO3A1	0	genome.wustl.edu	37	15	92459375	92459375	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	92459375	92459375	C	T	SNP	SLCO3A1	ENST00000318445	human	ensembl	74_37	+1	known	silent	c.333	p.C111	0.997	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO3A1	HGNC	ENSG00000176463	tier1	-	-	17	0	0.00	19	8	29.63
SLCO6A1	0	genome.wustl.edu	37	5	101834246	101834246	+	Nonsense_Mutation	SNP	A	A	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	101834246	101834246	A	T	SNP	SLCO6A1	ENST00000379807	human	ensembl	74_37	-1	known	nonsense	c.303	p.C101*	0.779	tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO6A1	HGNC	ENSG00000205359	tier1	-	-	27	0	0.00	11	23	67.65
SLFN14	0	genome.wustl.edu	37	17	33879871	33879871	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	33879871	33879871	A	-	DEL	SLFN14	ENST00000415846	human	ensembl	74_37	-1	known	frame_shift_del	c.1782	p.P595fs	1.000	superfamily_P-loop_NTPase	pfam_ATPase_AAA-4,superfamily_P-loop_NTPase	-	no_errors	SLFN14	HGNC	ENSG00000236320	tier1			22	0	0.00	21	6	22.22
SLITRK4	0	genome.wustl.edu	37	X	142717789	142717789	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	142717789	142717789	G	A	SNP	SLITRK4	ENST00000338017	human	ensembl	74_37	-1	known	missense	c.1136	p.A379V	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK4	HGNC	ENSG00000179542	tier1	-	-	31	0	0.00	6	25	80.65
SMARCAL1	0	genome.wustl.edu	37	2	217300166	217300168	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	217300166	217300168	CTT	-	DEL	SMARCAL1	ENST00000357276	human	ensembl	74_37	+1	known	in_frame_del	c.1591_1593	p.L532in_frame_del	1.000:1.000:0.972	pfam_SNF2_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_HARP_dom,pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCAL1	HGNC	ENSG00000138375	tier1			47	0	0.00	42	24	36.36
SMARCD2	0	genome.wustl.edu	37	17	61911556	61911556	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	61911556	61911556	A	G	SNP	SMARCD2	ENST00000448276	human	ensembl	74_37	-1	known	missense	c.1054	p.Y352H	1.000	pfam_SWIB_MDM2_domain,superfamily_SWIB_MDM2_domain,smart_SWIB_domain	pfam_SWIB_MDM2_domain,superfamily_SWIB_MDM2_domain,smart_SWIB_domain	-	no_errors	SMARCD2	HGNC	ENSG00000108604	tier1	-	-	12	0	0.00	12	8	38.10
SMG1P1	0	genome.wustl.edu	37	16	22503208	22503208	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	22503208	22503208	A	-	DEL	SMG1P1	ENST00000431681	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.087	-	-	-	no_errors	SMG1P1	HGNC	ENSG00000237296	tier1			55	0	0.00	57	17	22.97
SMPD2	0	genome.wustl.edu	37	6	109764847	109764847	+	Silent	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	109764847	109764847	C	G	SNP	SMPD2	ENST00000258052	human	ensembl	74_37	+1	known	silent	c.1011	p.L337	0.238	NULL	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	-	no_errors	SMPD2	HGNC	ENSG00000135587	tier1	-	-	45	0	0.00	29	25	45.45
SNORA67	0	genome.wustl.edu	37	17	7482902	7482903	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	7482902	7482903	TT	-	DEL	SNORA67	ENST00000581621	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.931:0.983	-	-	-	no_errors	SNORA67	HGNC	ENSG00000264772	tier1			44	0	0.00	44	26	37.14
SNORD115-19	0	genome.wustl.edu	37	15	25449560	25449560	+	RNA	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	25449560	25449560	T	C	SNP	SNORD115-19	ENST00000363098	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.871	-	-	-	no_errors	SNORD115-19	HGNC	ENSG00000199968				56	0	0.00	70	4	5.41
SNORD115-42	0	genome.wustl.edu	37	15	25492540	25492540	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	25492540	25492540	A	-	DEL	SNORD115-42	ENST00000364273	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.981	-	-	-	no_errors	SNORD115-42	HGNC	ENSG00000201143	tier1			58	0	0.00	37	52	58.43
SNRNP25	0	genome.wustl.edu	37	16	106355	106356	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	106355	106356	CT	-	DEL	SNRNP25	ENST00000397876	human	ensembl	74_37	+1	known	frame_shift_del	c.274_275	p.*93fs	0.357:0.368	NULL	NULL	-	no_errors	SNRNP25	HGNC	ENSG00000161981	tier1			28	0	0.00	38	6	13.64
SNRNP40	0	genome.wustl.edu	37	1	31732678	31732679	+	RNA	DEL	AA	AA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	31732678	31732679	AA	-	DEL	SNRNP40	ENST00000486941	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.040:0.034	-	-	-	no_errors	SNRNP40	HGNC	ENSG00000060688	tier1			22	0	0.00	8	8	50.00
SNX19	0	genome.wustl.edu	37	11	130775936	130775936	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	130775936	130775936	T	0	DEL	SNX19	ENST00000265909	human	ensembl	74_37	-1	known	frame_shift_del	c.2355	p.D786fs	0.005	NULL	pfam_Phox_assoc,pfam_Sorting_nexin_C,pfam_Phox,superfamily_Phox,smart_PX_assoc_Snx13,smart_Phox,pfscan_Phox,pfscan_Phox_assoc	-	no_errors	SNX19	HGNC	ENSG00000120451				44	0	0.00	39	7	15.22
SNX20	0	genome.wustl.edu	37	16	50707525	50707525	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	50707525	50707525	G	A	SNP	SNX20	ENST00000330943	human	ensembl	74_37	-1	known	missense	c.743	p.A248V	0.493	NULL	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX20	HGNC	ENSG00000167208	tier1	-	-	18	0	0.00	26	23	46.94
SNX21	0	genome.wustl.edu	37	20	44470649	44470651	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	44470649	44470651	TTT	-	DEL	SNX21	ENST00000344780	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.017:0.013:0.007	-	-	-	no_errors	SNX21	HGNC	ENSG00000124104	tier1			39	0	0.00	63	10	13.70
SNX25	0	genome.wustl.edu	37	4	186244914	186244914	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	186244914	186244914	A	-	DEL	SNX25	ENST00000264694	human	ensembl	74_37	+1	known	frame_shift_del	c.1217	p.K407fs	0.952	NULL	pfam_Phox_assoc,pfam_Sorting_nexin_C,pfam_RGS_dom,pfam_Phox,superfamily_Regulat_G_prot_signal_superfam,superfamily_Phox,smart_PX_assoc_Snx13,smart_Regulat_G_prot_signal_superfam,smart_Phox,pfscan_Phox,pfscan_Phox_assoc,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	SNX25	HGNC	ENSG00000109762	tier1			54	0	0.00	35	12	25.53
SOCS5	0	genome.wustl.edu	37	2	46986468	46986468	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	46986468	46986468	A	G	SNP	SOCS5	ENST00000306503	human	ensembl	74_37	+1	known	missense	c.799	p.R267G	1.000	NULL	pfam_SOCS,pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS5	HGNC	ENSG00000171150	tier1	-	-	49	0	0.00	29	30	50.85
SORBS1	0	genome.wustl.edu	37	10	97096993	97096993	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	97096993	97096993	C	T	SNP	SORBS1	ENST00000361941	human	ensembl	74_37	-1	known	missense	c.2924	p.R975Q	0.996	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain	-	no_errors	SORBS1	HGNC	ENSG00000095637	tier1	-	-	29	0	0.00	30	11	26.83
SORBS2	0	genome.wustl.edu	37	4	186541266	186541266	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	186541266	186541266	T	C	SNP	SORBS2	ENST00000284776	human	ensembl	74_37	-1	known	missense	c.2543	p.D848G	0.992	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SORBS2	HGNC	ENSG00000154556	tier1	-	-	64	0	0.00	61	13	17.57
SORCS1	0	genome.wustl.edu	37	10	108923947	108923947	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	108923947	108923947	G	A	SNP	SORCS1	ENST00000344440	human	ensembl	74_37	-1	known	missense	c.338	p.A113V	0.000	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS1	HGNC	ENSG00000108018	tier1	-	-	19	0	0.00	23	12	34.29
SOS2	0	genome.wustl.edu	37	14	50623685	50623685	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	50623685	50623685	A	G	SNP	SOS2	ENST00000555794	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SOS2	HGNC	ENSG00000100485	tier1	-	-	24	0	0.00	22	20	47.62
SOWAHA	0	genome.wustl.edu	37	5	132150631	132150631	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	132150631	132150631	G	A	SNP	SOWAHA	ENST00000378693	human	ensembl	74_37	+1	known	missense	c.1318	p.D440N	0.986	superfamily_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SOWAHA	HGNC	ENSG00000198944	tier1	-	-	11	0	0.00	10	5	33.33
SOX2-OT	0	genome.wustl.edu	37	3	181417763	181417763	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	181417763	181417763	T	-	DEL	SOX2-OT	ENST00000597347	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SOX2-OT	HGNC	ENSG00000242808	tier1			11	0	0.00	25	11	30.56
SP2	0	genome.wustl.edu	37	17	46000463	46000463	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	46000463	46000463	A	-	DEL	SP2	ENST00000376741	human	ensembl	74_37	+1	known	frame_shift_del	c.1195	p.K400fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP2	HGNC	ENSG00000167182	tier1			27	0	0.00	27	13	32.50
SPATA1	0	genome.wustl.edu	37	1	84991635	84991635	+	RNA	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	84991635	84991635	T	C	SNP	SPATA1	ENST00000370638	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SPATA1	HGNC	ENSG00000122432	tier1	-	-	38	0	0.00	54	12	18.18
SPATA13	0	genome.wustl.edu	37	13	24798196	24798196	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	24798196	24798196	G	A	SNP	SPATA13	ENST00000382108	human	ensembl	74_37	+1	known	missense	c.1129	p.G377R	0.000	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	SPATA13	HGNC	ENSG00000182957	tier1	-	-	31	0	0.00	29	18	38.30
SPATA2L	0	genome.wustl.edu	37	16	89764373	89764374	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	89764373	89764374	-	G	INS	SPATA2L	ENST00000289805	human	ensembl	74_37	-1	known	frame_shift_ins	c.644_643	p.R215fs	0.007:0.010	NULL	NULL	-	no_errors	SPATA2L	HGNC	ENSG00000158792	tier1			45	0	0.00	82	23	21.90
SPATA42	0	genome.wustl.edu	37	1	109400924	109400925	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	109400924	109400925	TT	-	DEL	SPATA42	ENST00000417241	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	SPATA42	HGNC	ENSG00000203897	tier1			20	0	0.00	12	2	14.29
SPATA5	0	genome.wustl.edu	37	4	123855285	123855285	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	123855285	123855285	A	G	SNP	SPATA5	ENST00000274008	human	ensembl	74_37	+1	known	missense	c.539	p.Y180C	0.268	NULL	pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase	-	no_errors	SPATA5	HGNC	ENSG00000145375	tier1	-	-	43	0	0.00	34	16	32.00
SPEG	0	genome.wustl.edu	37	2	220333698	220333698	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	220333698	220333698	A	T	SNP	SPEG	ENST00000312358	human	ensembl	74_37	+1	novel	missense	c.3419	p.N1140I	0.976	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	SPEG	HGNC	ENSG00000072195	tier1	-	-	45	0	0.00	52	33	38.82
SPHKAP	0	genome.wustl.edu	37	2	228884465	228884465	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	228884465	228884465	C	T	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	missense	c.1105	p.G369R	0.001	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	tier1	-	-	62	0	0.00	70	36	33.96
SPTBN5	0	genome.wustl.edu	37	15	42160632	42160632	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	42160632	42160632	C	T	SNP	SPTBN5	ENST00000320955	human	ensembl	74_37	-1	known	silent	c.6021	p.Q2007	0.992	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877	tier1	-	-	46	0	0.00	17	48	73.85
SQLE	0	genome.wustl.edu	37	8	126017779	126017779	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	126017779	126017779	G	T	SNP	SQLE	ENST00000265896	human	ensembl	74_37	+1	known	missense	c.557	p.G186V	1.000	pfam_mOase_FAD-bd	pfam_Squalene_epoxidase,pfam_mOase_FAD-bd,pfam_Pyr_OxRdtase_NAD-bd_dom,prints_Rng_hydrolase-like	-	no_errors	SQLE	HGNC	ENSG00000104549	tier1	-	-	39	0	0.00	117	24	17.02
SRCIN1	0	genome.wustl.edu	37	17	36699355	36699355	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	36699355	36699355	G	A	SNP	SRCIN1	ENST00000398579	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SRCIN1	HGNC	ENSG00000017373	tier1	-	-	13	0	0.00	28	21	42.00
SREK1IP1	0	genome.wustl.edu	37	5	64023941	64023941	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	64023941	64023941	T	C	SNP	SREK1IP1	ENST00000513458	human	ensembl	74_37	-1	known	missense	c.271	p.R91G	1.000	NULL	superfamily_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	SREK1IP1	HGNC	ENSG00000153006				36	0	0.00	21	4	8.33
SRL	0	genome.wustl.edu	37	16	4257572	4257572	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	4257572	4257572	C	T	SNP	SRL	ENST00000572111	human	ensembl	74_37	-1	known	missense	c.595	p.V199I	0.004	NULL	NULL	-	no_errors	SRL	HGNC	ENSG00000185739	tier1	-	-	44	0	0.00	36	32	47.06
SRP14	0	genome.wustl.edu	37	15	40328597	40328599	+	In_Frame_Del	DEL	TGC	TGC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TGC	TGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	40328597	40328599	TGC	-	DEL	SRP14	ENST00000267884	human	ensembl	74_37	-1	known	in_frame_del	c.348_346	p.A116in_frame_del	0.058:0.058:0.057	prints_Antifreeze_1	pfam_Signal_recog_particle_SRP14,superfamily_Signal_recog_particle_SRP9/14,prints_Antifreeze_1	-	no_errors	SRP14	HGNC	ENSG00000140319	tier1			57	0	0.00	93	11	10.58
SRP72	0	genome.wustl.edu	37	4	57333820	57333820	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	57333820	57333820	G	-	DEL	SRP72	ENST00000342756	human	ensembl	74_37	+1	known	frame_shift_del	c.19	p.V9fs	0.920	NULL	pfam_Signal_recog_part_SRP72_RNA-bd,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	SRP72	HGNC	ENSG00000174780	tier1			15	0	0.00	16	18	52.94
SRPK1	0	genome.wustl.edu	37	6	35838144	35838145	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	35838144	35838145	-	T	INS	SRPK1	ENST00000373825	human	ensembl	74_37	-1	known	frame_shift_ins	c.905_904	p.R302fs	1.000:1.000	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	SRPK1	HGNC	ENSG00000096063	tier1			52	0	0.00	41	9	18.00
SRPR	0	genome.wustl.edu	37	11	126137087	126137087	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	126137087	126137087	T	-	DEL	SRPR	ENST00000332118	human	ensembl	74_37	-1	known	frame_shift_del	c.509	p.K170fs	0.991	pfam_Sig_recog_particle_rcpt_asu_N	pfam_Sig_recog_particle_rcpt_asu_N,pfam_SRP54_GTPase_dom,pfam_ArgK,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,pfam_Signal_recog_particl_SRP54_hlx,superfamily_Longin-like_dom,superfamily_P-loop_NTPase,superfamily_Signal_recog_particl_SRP54_hlx,smart_Signal_recog_particl_SRP54_hlx,smart_AAA+_ATPase,smart_SRP54_GTPase_dom	-	no_errors	SRPR	HGNC	ENSG00000182934	tier1			110	0	0.00	114	29	20.28
SRRD	0	genome.wustl.edu	37	22	26884176	26884176	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	26884176	26884176	C	T	SNP	SRRD	ENST00000215917	human	ensembl	74_37	+1	known	silent	c.432	p.Y144	0.950	pfam_SRR1-like	pfam_SRR1-like	-	no_errors	SRRD	HGNC	ENSG00000100104	tier1	-	-	19	0	0.00	19	13	40.62
SRRM2	0	genome.wustl.edu	37	16	2821468	2821468	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	2821468	2821468	C	T	SNP	SRRM2	ENST00000573583	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	SRRM2	HGNC	ENSG00000167978	tier1	-	-	42	0	0.00	65	19	22.62
SRRM2	0	genome.wustl.edu	37	16	2812095	2812095	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	2812095	2812095	G	T	SNP	SRRM2	ENST00000301740	human	ensembl	74_37	+1	known	missense	c.1566	p.W522C	1.000	NULL	pfam_mRNA_splic_Cwf21	-	no_errors	SRRM2	HGNC	ENSG00000167978				25	0	0.00	27	4	12.50
SS18L1	0	genome.wustl.edu	37	20	60737811	60737811	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	60737811	60737811	C	T	SNP	SS18L1	ENST00000370848	human	ensembl	74_37	+1	known	missense	c.389	p.P130L	0.998	NULL	pfam_SS18_fam	-	no_errors	SS18L1	HGNC	ENSG00000184402	tier1	-	-	29	0	0.00	53	53	50.00
ST18	0	genome.wustl.edu	37	8	53055599	53055599	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	53055599	53055599	G	T	SNP	ST18	ENST00000276480	human	ensembl	74_37	-1	known	missense	c.2059	p.P687T	0.925	pfam_Myelin_TF	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	ST18	HGNC	ENSG00000147488	tier1	-	-	38	0	0.00	94	38	28.79
STAG3L5P-PVRIG2P-PILRB	0	genome.wustl.edu	37	7	99943553	99943553	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	99943553	99943553	T	-	DEL	STAG3L5P-PVRIG2P-PILRB	ENST00000310771	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	STAG3L5P-PVRIG2P-PILRB	HGNC	ENSG00000272752	tier1			15	0	0.00	15	11	42.31
STK11	0	genome.wustl.edu	37	19	1220393	1220393	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	1220393	1220393	C	T	SNP	STK11	ENST00000326873	human	ensembl	74_37	+1	known	silent	c.486	p.D162	0.955	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK11	HGNC	ENSG00000118046	tier1	-	-	33	0	0.00	54	25	31.65
STK17A	0	genome.wustl.edu	37	7	43647973	43647973	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	43647973	43647973	C	T	SNP	STK17A	ENST00000319357	human	ensembl	74_37	+1	known	missense	c.538	p.R180C	0.983	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK17A	HGNC	ENSG00000164543	tier1	-	-	43	0	0.00	43	24	35.82
STL	0	genome.wustl.edu	37	6	125232172	125232172	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	125232172	125232172	C	T	SNP	STL	ENST00000439075	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-510H23.1	Clone_based_vega_gene	ENSG00000236548	tier1	-	-	20	0	0.00	9	13	56.52
SURF1	0	genome.wustl.edu	37	9	136218825	136218826	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	136218825	136218826	AG	-	DEL	SURF1	ENST00000371974	human	ensembl	74_37	-1	known	frame_shift_del	c.846_845	p.S282fs	1.000:1.000	pfam_Surf1/Shy1,pfscan_Surf1/Shy1	pfam_Surf1/Shy1,pfscan_Surf1/Shy1	-	no_errors	SURF1	HGNC	ENSG00000148290	tier1			37	0	0.00	41	16	28.07
SVEP1	0	genome.wustl.edu	37	9	113208246	113208246	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	113208246	113208246	A	G	SNP	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	missense	c.4334	p.L1445P	0.969	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124	tier1	-	-	23	0	0.00	28	13	31.71
SVIL	0	genome.wustl.edu	37	10	29762850	29762852	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	29762850	29762852	AGA	-	DEL	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	in_frame_del	c.5446_5444	p.F1815in_frame_del	1.000:1.000:1.000	pfam_Gelsolin_dom,smart_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321	tier1			20	0	0.00	19	3	13.64
SWT1	0	genome.wustl.edu	37	1	185151134	185151134	+	Silent	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	185151134	185151134	T	A	SNP	SWT1	ENST00000367500	human	ensembl	74_37	+1	known	silent	c.1083	p.P361	0.992	NULL	smart_PIN_dom	-	no_errors	SWT1	HGNC	ENSG00000116668	tier1	-	-	30	0	0.00	38	8	17.39
SYCP3	0	genome.wustl.edu	37	12	102122901	102122901	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	102122901	102122901	T	-	DEL	SYCP3	ENST00000266743	human	ensembl	74_37	-1	known	frame_shift_del	c.643	p.I215fs	0.988	NULL	pfam_Cor1/Xlr/Xmr	-	no_errors	SYCP3	HGNC	ENSG00000139351	tier1			36	0	0.00	19	16	45.71
SYDE1	0	genome.wustl.edu	37	19	15222161	15222161	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	15222161	15222161	T	C	SNP	SYDE1	ENST00000342784	human	ensembl	74_37	+1	known	missense	c.1328	p.V443A	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	SYDE1	HGNC	ENSG00000105137	tier1	-	-	74	0	0.00	74	28	27.18
SYMPK	0	genome.wustl.edu	37	19	46328449	46328449	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	46328449	46328449	G	A	SNP	SYMPK	ENST00000245934	human	ensembl	74_37	-1	known	silent	c.2470	p.L824	1.000	superfamily_ARM-type_fold	pfam_DUF3453,pfam_Symplekin_C,superfamily_ARM-type_fold	-	no_errors	SYMPK	HGNC	ENSG00000125755	tier1	-	-	53	0	0.00	41	69	62.73
SYNE2	0	genome.wustl.edu	37	14	64655376	64655376	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	64655376	64655376	C	G	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.17821	p.L5941V	0.779	smart_Spectrin/alpha-actinin	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654				13	0	0.00	27	2	6.90
SYT2	0	genome.wustl.edu	37	1	202574790	202574790	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	202574790	202574790	C	T	SNP	SYT2	ENST00000367267	human	ensembl	74_37	-1	known	silent	c.111	p.G37	0.097	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT2	HGNC	ENSG00000143858	tier1	-	-	105	0	0.00	94	82	46.33
TAF1C	0	genome.wustl.edu	37	16	84213651	84213651	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	84213651	84213651	G	-	DEL	TAF1C	ENST00000378541	human	ensembl	74_37	-1	known	frame_shift_del	c.1600	p.Q534fs	0.998	NULL	superfamily_WD40_repeat_dom	-	no_errors	TAF1C	HGNC	ENSG00000103168	tier1			8	0	0.00	12	5	29.41
TAF1D	0	genome.wustl.edu	37	11	93469128	93469128	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	93469128	93469128	T	-	DEL	TAF1D	ENST00000530089	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TAF1D	HGNC	ENSG00000166012	tier1			12	0	0.00	10	4	28.57
TANC1	0	genome.wustl.edu	37	2	160050800	160050800	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	160050800	160050800	C	T	SNP	TANC1	ENST00000263635	human	ensembl	74_37	+1	known	silent	c.2775	p.N925	0.954	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC1	HGNC	ENSG00000115183	tier1	-	-	34	0	0.00	54	18	25.00
TARS	0	genome.wustl.edu	37	5	33441106	33441106	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	33441106	33441106	G	A	SNP	TARS	ENST00000502508	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TARS	HGNC	ENSG00000113407	tier1	-	-	25	0	0.00	76	29	27.62
TBC1D1	0	genome.wustl.edu	37	4	38134424	38134426	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	38134424	38134426	TTT	-	DEL	TBC1D1	ENST00000405444	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.018:0.027:0.074	-	-	-	no_errors	TBC1D1	HGNC	ENSG00000065882	tier1			30	0	0.00	45	15	25.00
TBC1D29	0	genome.wustl.edu	37	17	28887667	28887667	+	Silent	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	28887667	28887667	T	C	SNP	TBC1D29	ENST00000579181	human	ensembl	74_37	+1	known	silent	c.111	p.D37	1.000	superfamily_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	superfamily_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D29	HGNC	ENSG00000266733	tier1	rs78888987	-	63	0	0.00	141	12	7.84
TBC1D30	0	genome.wustl.edu	37	12	65269009	65269009	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	65269009	65269009	T	C	SNP	TBC1D30	ENST00000229088	human	ensembl	74_37	+1	known	missense	c.2216	p.M739T	0.702	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D30	HGNC	ENSG00000111490	tier1	-	-	18	0	0.00	23	16	41.03
TBC1D3P1-DHX40P1	0	genome.wustl.edu	37	17	58066651	58066651	+	RNA	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	58066651	58066651	C	T	SNP	TBC1D3P1-DHX40P1	ENST00000587125	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TBC1D3P1-DHX40P1	HGNC	ENSG00000267104				28	0	0.00	30	4	11.76
TBC1D9B	0	genome.wustl.edu	37	5	179306764	179306764	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	179306764	179306764	G	A	SNP	TBC1D9B	ENST00000356834	human	ensembl	74_37	-1	known	missense	c.1280	p.S427L	0.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9B	HGNC	ENSG00000197226	tier1	-	-	21	0	0.00	11	31	73.81
TBCD	0	genome.wustl.edu	37	17	80895806	80895806	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	80895806	80895806	G	A	SNP	TBCD	ENST00000539345	human	ensembl	74_37	+1	novel	silent	c.3366	p.P1122	0.001	NULL	pfam_Tubulin_specific_chaperoneD_C,superfamily_ARM-type_fold	-	no_errors	TBCD	HGNC	ENSG00000141556	tier1	-	-	55	0	0.00	36	34	48.57
TBP	0	genome.wustl.edu	37	6	170871055	170871055	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	170871055	170871055	G	A	SNP	TBP	ENST00000230354	human	ensembl	74_37	+1	known	silent	c.231	p.Q77	0.993	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592	tier1	rs112928724	-	50	0	0.00	89	8	8.16
TBX10	0	genome.wustl.edu	37	11	67399149	67399149	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	67399149	67399149	A	G	SNP	TBX10	ENST00000335385	human	ensembl	74_37	-1	known	missense	c.1085	p.L362P	0.006	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX10	HGNC	ENSG00000167800	tier1	-	-	40	0	0.00	180	23	11.33
TCF20	0	genome.wustl.edu	37	22	42608248	42608248	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	42608248	42608248	G	A	SNP	TCF20	ENST00000359486	human	ensembl	74_37	-1	known	missense	c.3064	p.R1022W	0.895	NULL	smart_Znf_PHD	-	no_errors	TCF20	HGNC	ENSG00000100207	tier1	-	-	39	0	0.00	60	8	11.76
TCF25	0	genome.wustl.edu	37	16	89972642	89972642	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	89972642	89972642	C	T	SNP	TCF25	ENST00000263346	human	ensembl	74_37	+1	known	missense	c.1669	p.R557C	1.000	pfam_TCF25	pfam_TCF25	-	no_errors	TCF25	HGNC	ENSG00000141002	tier1	-	-	41	0	0.00	64	18	21.95
TCFL5	0	genome.wustl.edu	37	20	61488860	61488860	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	61488860	61488860	A	G	SNP	TCFL5	ENST00000335351	human	ensembl	74_37	-1	known	silent	c.1125	p.A375	0.003	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TCFL5	HGNC	ENSG00000101190	tier1	-	-	39	0	0.00	42	45	51.72
TCHP	0	genome.wustl.edu	37	12	110350842	110350842	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	110350842	110350842	C	T	SNP	TCHP	ENST00000312777	human	ensembl	74_37	+1	known	nonsense	c.1099	p.R367*	1.000	NULL	NULL	-	no_errors	TCHP	HGNC	ENSG00000139437	tier1	-	-	28	0	0.00	40	14	25.93
TCHP	0	genome.wustl.edu	37	12	110353217	110353217	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	110353217	110353217	C	T	SNP	TCHP	ENST00000312777	human	ensembl	74_37	+1	known	missense	c.1330	p.R444C	1.000	NULL	NULL	-	no_errors	TCHP	HGNC	ENSG00000139437	tier1	-	-	34	0	0.00	22	24	52.17
TCN2	0	genome.wustl.edu	37	22	31011717	31011717	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	31011717	31011717	G	A	SNP	TCN2	ENST00000215838	human	ensembl	74_37	+1	known	missense	c.883	p.V295I	0.042	pfam_Cbl-bd_transpt_euk	pfam_Cbl-bd_transpt_euk,superfamily_Terpenoid_cyclase/PrenylTrfase	-	no_errors	TCN2	HGNC	ENSG00000185339	tier1	-	-	28	0	0.00	37	19	33.93
TDRD1	0	genome.wustl.edu	37	10	115986880	115986880	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	115986880	115986880	A	-	DEL	TDRD1	ENST00000251864	human	ensembl	74_37	+1	known	frame_shift_del	c.3225	p.N1077fs	0.327	NULL	pfam_Tudor,pfam_Znf_MYND,smart_Tudor,pfscan_Tudor,pfscan_Znf_MYND	-	no_errors	TDRD1	HGNC	ENSG00000095627	tier1			48	0	0.00	44	20	31.25
TDRD3	0	genome.wustl.edu	37	13	61109341	61109341	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	61109341	61109341	A	G	SNP	TDRD3	ENST00000535286	human	ensembl	74_37	+1	known	missense	c.2092	p.I698V	1.000	pfam_Tudor,pfam_Survival_motor_neuron,smart_Tudor,pfscan_Tudor	pfam_DUF1767,pfam_Tudor,pfam_Survival_motor_neuron,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,smart_Tudor,pfscan_Tudor,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TDRD3	HGNC	ENSG00000083544	tier1	-	-	41	0	0.00	32	29	47.54
TDRD5	0	genome.wustl.edu	37	1	179638527	179638527	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	179638527	179638527	C	T	SNP	TDRD5	ENST00000444136	human	ensembl	74_37	+1	known	missense	c.2848	p.P950S	0.000	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD5	HGNC	ENSG00000162782	tier1	-	-	106	0	0.00	57	36	38.71
TDRD6	0	genome.wustl.edu	37	6	46656650	46656650	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	46656650	46656650	C	A	SNP	TDRD6	ENST00000316081	human	ensembl	74_37	+1	known	missense	c.785	p.P262H	1.000	pfam_Tudor	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD6	HGNC	ENSG00000180113	tier1	-	-	67	0	0.00	44	19	30.16
TECPR1	0	genome.wustl.edu	37	7	97860399	97860399	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	97860399	97860399	C	-	DEL	TECPR1	ENST00000379795	human	ensembl	74_37	-1	known	frame_shift_del	c.2159	p.S720fs	1.000	smart_Beta-propeller_rpt_TECPR	pfam_Beta-propeller_rpt_TECPR,superfamily_RCC1/BLIP-II,smart_Beta-propeller_rpt_TECPR,smart_Peroxin/Ferlin	-	no_errors	TECPR1	HGNC	ENSG00000205356	tier1			50	0	0.00	44	35	44.30
TELO2	0	genome.wustl.edu	37	16	1550422	1550422	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	1550422	1550422	C	T	SNP	TELO2	ENST00000262319	human	ensembl	74_37	+1	known	silent	c.1077	p.H359	0.042	NULL	pfam_Telomere_length_regulation_dom,superfamily_ARM-type_fold	-	no_errors	TELO2	HGNC	ENSG00000100726	tier1	-	-	22	0	0.00	28	8	22.22
TENM2	0	genome.wustl.edu	37	5	167674984	167674984	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	167674984	167674984	A	G	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	missense	c.7040	p.Y2347C	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934	tier1	-	-	34	0	0.00	5	25	83.33
TEP1	0	genome.wustl.edu	37	14	20845785	20845785	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	20845785	20845785	C	A	SNP	TEP1	ENST00000262715	human	ensembl	74_37	-1	known	missense	c.5849	p.G1950V	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_TROVE,pfam_TEP1_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_NACHT_NTPase,pfscan_TROVE,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TEP1	HGNC	ENSG00000129566	tier1	-	-	24	0	0.00	20	21	51.22
TET3	0	genome.wustl.edu	37	2	74326650	74326652	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	74326650	74326652	AGA	-	DEL	TET3	ENST00000409262	human	ensembl	74_37	+1	known	in_frame_del	c.3110_3112	p.K1040in_frame_del	1.000:1.000:1.000	NULL	NULL	-	no_errors	TET3	HGNC	ENSG00000187605	tier1			26	0	0.00	37	25	40.32
TET3	0	genome.wustl.edu	37	2	74328621	74328621	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	74328621	74328621	C	T	SNP	TET3	ENST00000409262	human	ensembl	74_37	+1	known	missense	c.4301	p.A1434V	1.000	NULL	NULL	-	no_errors	TET3	HGNC	ENSG00000187605	tier1	-	-	47	0	0.00	82	19	18.81
TFAP2A	0	genome.wustl.edu	37	6	10407037	10407038	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	10407037	10407038	AC	-	DEL	TFAP2A	ENST00000379604	human	ensembl	74_37	-1	known	frame_shift_del	c.521_520	p.V174fs	1.000:1.000	NULL	pfam_TF_AP2_C,prints_TF_AP2_C,prints_TF_AP2_alpha_N	-	no_errors	TFAP2A	HGNC	ENSG00000137203	tier1			45	0	0.00	32	12	27.27
TFG	0	genome.wustl.edu	37	3	100463493	100463493	+	RNA	SNP	G	G	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	100463493	100463493	G	C	SNP	TFG	ENST00000481203	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.965	-	-	-	no_errors	TFG	HGNC	ENSG00000114354	tier1	-	-	31	0	0.00	24	16	40.00
TFRC	0	genome.wustl.edu	37	3	195778941	195778941	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	195778941	195778941	G	A	SNP	TFRC	ENST00000360110	human	ensembl	74_37	-1	known	missense	c.2155	p.R719C	0.007	pfam_TFR-like_dimer_dom,superfamily_TFR-like_dimer_dom	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	TFRC	HGNC	ENSG00000072274	tier1	-	-	34	0	0.00	71	11	13.41
TGFBR2	0	genome.wustl.edu	37	3	30691872	30691872	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	30691872	30691872	A	-	DEL	TGFBR2	ENST00000359013	human	ensembl	74_37	+1	known	frame_shift_del	c.449	p.K153fs	1.000	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,prints_TGFB_receptor	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_TGFB_receptor,pfscan_Prot_kinase_dom	-	no_errors	TGFBR2	HGNC	ENSG00000163513	tier1			38	0	0.00	17	24	58.54
THAP3	0	genome.wustl.edu	37	1	6694120	6694120	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	6694120	6694120	G	A	SNP	THAP3	ENST00000377627	human	ensembl	74_37	+1	known	missense	c.500	p.R167H	0.000	NULL	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP3	HGNC	ENSG00000041988				28	0	0.00	26	4	13.33
TIA1	0	genome.wustl.edu	37	2	70442603	70442603	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	70442603	70442603	G	A	SNP	TIA1	ENST00000433529	human	ensembl	74_37	-1	known	missense	c.788	p.A263V	1.000	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	TIA1	HGNC	ENSG00000116001	tier1	-	-	46	0	0.00	32	22	40.74
TLL2	0	genome.wustl.edu	37	10	98170377	98170377	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	98170377	98170377	A	G	SNP	TLL2	ENST00000469598	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TLL2	HGNC	ENSG00000095587	tier1	-	-	29	0	0.00	44	20	31.25
TMC8	0	genome.wustl.edu	37	17	76127679	76127679	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	76127679	76127679	C	T	SNP	TMC8	ENST00000318430	human	ensembl	74_37	+1	known	missense	c.10	p.P4S	0.007	NULL	pfam_TMC	-	no_errors	TMC8	HGNC	ENSG00000167895	tier1	-	-	11	0	0.00	13	4	23.53
TMCO3	0	genome.wustl.edu	37	13	114204129	114204130	+	RNA	DEL	TT	TT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	114204129	114204130	TT	-	DEL	TMCO3	ENST00000460039	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	TMCO3	HGNC	ENSG00000150403	tier1			71	0	0.00	109	45	29.22
TMEM117	0	genome.wustl.edu	37	12	44783452	44783452	+	RNA	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	44783452	44783452	T	C	SNP	TMEM117	ENST00000546978	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TMEM117	HGNC	ENSG00000139173	tier1	-	-	22	0	0.00	10	15	60.00
TMEM132B	0	genome.wustl.edu	37	12	126138243	126138243	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	126138243	126138243	G	A	SNP	TMEM132B	ENST00000299308	human	ensembl	74_37	+1	known	missense	c.2224	p.E742K	0.992	NULL	NULL	-	no_errors	TMEM132B	HGNC	ENSG00000139364	tier1	-	-	69	0	0.00	46	20	30.30
TMEM132C	0	genome.wustl.edu	37	12	128899918	128899918	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	12	128899918	128899918	G	A	SNP	TMEM132C	ENST00000435159	human	ensembl	74_37	+1	known	missense	c.727	p.G243R	0.000	NULL	NULL	-	no_errors	TMEM132C	HGNC	ENSG00000181234	tier1	-	-	23	0	0.00	29	28	49.12
TMEM173	0	genome.wustl.edu	37	5	138858042	138858042	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	138858042	138858042	C	T	SNP	TMEM173	ENST00000330794	human	ensembl	74_37	-1	known	missense	c.572	p.R191Q	0.000	NULL	NULL	-	no_errors	TMEM173	HGNC	ENSG00000184584	tier1	-	-	49	0	0.00	43	33	43.42
TMEM245	0	genome.wustl.edu	37	9	111849505	111849505	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	111849505	111849505	G	A	SNP	TMEM245	ENST00000374586	human	ensembl	74_37	-1	known	missense	c.1268	p.A423V	1.000	NULL	pfam_UPF0118	-	no_errors	TMEM245	HGNC	ENSG00000106771	tier1	-	-	32	0	0.00	28	11	28.21
TMEM55B	0	genome.wustl.edu	37	14	20926824	20926824	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	14	20926824	20926824	A	C	SNP	TMEM55B	ENST00000398020	human	ensembl	74_37	-1	known	missense	c.749	p.I250S	1.000	pfam_Transmembrane_protein_55A/B	pfam_Transmembrane_protein_55A/B	-	no_errors	TMEM55B	HGNC	ENSG00000165782	tier1	-	-	26	0	0.00	54	28	34.15
TMEM67	0	genome.wustl.edu	37	8	94828722	94828723	+	RNA	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	94828722	94828723	-	A	INS	TMEM67	ENST00000463467	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.573:0.614	-	-	-	no_errors	TMEM67	HGNC	ENSG00000164953	tier1			20	0	0.00	60	10	14.29
TMF1	0	genome.wustl.edu	37	3	69072373	69072373	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	69072373	69072373	C	T	SNP	TMF1	ENST00000543976	human	ensembl	74_37	-1	known	missense	c.3246	p.M1082I	1.000	pfam_TMF_TATA-bd	pfam_TMF_TATA-bd,pfam_TMF_DNA-bd	-	no_errors	TMF1	HGNC	ENSG00000144747	tier1	-	-	53	0	0.00	15	15	50.00
TMPRSS5	0	genome.wustl.edu	37	11	113560988	113560988	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	113560988	113560988	C	T	SNP	TMPRSS5	ENST00000299882	human	ensembl	74_37	-1	known	missense	c.1171	p.A391T	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS5	HGNC	ENSG00000166682	tier1	-	-	14	0	0.00	7	14	66.67
TNFRSF14	0	genome.wustl.edu	37	1	2493292	2493292	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	2493292	2493292	A	G	SNP	TNFRSF14	ENST00000480305	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TNFRSF14	HGNC	ENSG00000157873	tier1	-	-	42	0	0.00	49	15	23.44
TNKS1BP1	0	genome.wustl.edu	37	11	57087989	57087989	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	57087989	57087989	G	A	SNP	TNKS1BP1	ENST00000358252	human	ensembl	74_37	-1	known	missense	c.292	p.P98S	0.876	NULL	NULL	-	no_errors	TNKS1BP1	HGNC	ENSG00000149115	tier1	-	-	40	0	0.00	31	50	61.73
TNN	0	genome.wustl.edu	37	1	175097224	175097224	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	175097224	175097224	C	T	SNP	TNN	ENST00000239462	human	ensembl	74_37	+1	known	silent	c.3102	p.G1034	0.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNN	HGNC	ENSG00000120332	tier1	-	-	38	0	0.00	34	35	50.72
TNR	0	genome.wustl.edu	37	1	175360447	175360447	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	175360447	175360447	G	-	DEL	TNR	ENST00000263525	human	ensembl	74_37	-1	known	frame_shift_del	c.1484	p.P495fs	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNR	HGNC	ENSG00000116147	tier1			36	0	0.00	21	30	58.82
TNXB	0	genome.wustl.edu	37	6	32032631	32032631	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	32032631	32032631	G	A	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.6808	p.R2270C	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477				27	0	0.00	34	5	12.82
TOMM22	0	genome.wustl.edu	37	22	39078977	39078977	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	39078977	39078977	A	G	SNP	TOMM22	ENST00000216034	human	ensembl	74_37	+1	known	silent	c.330	p.Q110	0.994	pfam_Tom22	pfam_Tom22	-	no_errors	TOMM22	HGNC	ENSG00000100216	tier1	-	-	56	0	0.00	90	24	21.05
TOPAZ1	0	genome.wustl.edu	37	3	44286118	44286119	+	Frame_Shift_Ins	INS	-	-	AG			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	44286118	44286119	-	AG	INS	TOPAZ1	ENST00000309765	human	ensembl	74_37	+1	known	frame_shift_ins	c.2120_2121	p.E711fs	1.000:0.999	NULL	NULL	-	no_errors	TOPAZ1	HGNC	ENSG00000173769	tier1			10	0	0.00	6	3	33.33
TOPBP1	0	genome.wustl.edu	37	3	133379900	133379900	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	133379900	133379900	A	-	DEL	TOPBP1	ENST00000260810	human	ensembl	74_37	-1	known	frame_shift_del	c.72	p.F24fs	0.998	NULL	pfam_BRCT_dom,superfamily_BRCT_dom,superfamily_Secretoglobin,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TOPBP1	HGNC	ENSG00000163781	tier1			39	0	0.00	45	25	35.71
TP53	0	genome.wustl.edu	37	17	7577094	7577094	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	7577094	7577094	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.844	p.R282W	0.997	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934574	-	38	0	0.00	35	25	41.67
TP53	0	genome.wustl.edu	37	17	7578190	7578190	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	7578190	7578190	T	C	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.659	p.Y220C	0.998	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	27	0	0.00	46	37	44.58
TPO	0	genome.wustl.edu	37	2	1544474	1544474	+	Silent	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	1544474	1544474	C	A	SNP	TPO	ENST00000329066	human	ensembl	74_37	+1	known	silent	c.2727	p.A909	0.000	NULL	pfam_Haem_peroxidase_animal,pfam_EGF-like_Ca-bd_dom,superfamily_Haem_peroxidase,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	TPO	HGNC	ENSG00000115705	tier1	-	-	42	0	0.00	41	32	43.84
TPRXL	0	genome.wustl.edu	37	3	14106354	14106354	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	14106354	14106354	C	T	SNP	TPRXL	ENST00000326972	human	ensembl	74_37	+1	known	silent	c.678	p.S226	0.580	NULL	NULL	-	no_errors	TPRXL	HGNC	ENSG00000180438	tier1	-	-	20	0	0.00	31	9	22.50
TRA2B	0	genome.wustl.edu	37	3	185641779	185641779	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	185641779	185641779	A	-	DEL	TRA2B	ENST00000465245	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TRA2B	HGNC	ENSG00000136527	tier1			13	0	0.00	22	7	24.14
TRABD2B	0	genome.wustl.edu	37	1	48240924	48240924	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	48240924	48240924	G	A	SNP	TRABD2B	ENST00000606738	human	ensembl	74_37	-1	known	missense	c.1267	p.R423W	0.989	NULL	superfamily_SuperAg_toxin_C	-	no_errors	TRABD2B	HGNC	ENSG00000269113	tier1	-	-	26	0	0.00	44	7	13.73
TRAF6	0	genome.wustl.edu	37	11	36522834	36522834	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	36522834	36522834	G	A	SNP	TRAF6	ENST00000348124	human	ensembl	74_37	-1	known	nonsense	c.232	p.R78*	0.994	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pirsf_TNF_rcpt--assoc_TRAF,pfscan_Znf_RING	pfam_MATH,pfam_Znf_C3HC4_RING-type,superfamily_TRAF-like,smart_Znf_RING,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF6	HGNC	ENSG00000175104	tier1	-	-	39	0	0.00	36	24	40.00
TRAPPC12	0	genome.wustl.edu	37	2	3464042	3464042	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	3464042	3464042	C	T	SNP	TRAPPC12	ENST00000324266	human	ensembl	74_37	+1	known	missense	c.1612	p.R538W	0.977	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TRAPPC12	HGNC	ENSG00000171853	tier1	-	-	61	0	0.00	99	58	36.94
TRAPPC9	0	genome.wustl.edu	37	8	141294067	141294067	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	141294067	141294067	G	A	SNP	TRAPPC9	ENST00000389328	human	ensembl	74_37	-1	known	missense	c.2329	p.P777S	0.787	pfam_TRAPP_II_complex_Trs120	pfam_TRAPP_II_complex_Trs120	-	no_errors	TRAPPC9	HGNC	ENSG00000167632	tier1	-	-	31	0	0.00	73	9	10.98
TRDN	0	genome.wustl.edu	37	6	123759208	123759209	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	123759208	123759209	-	T	INS	TRDN	ENST00000398178	human	ensembl	74_37	-1	known	frame_shift_ins	c.1051_1050	p.E350fs	1.000:1.000	NULL	pfam_Asp-B-hydro/Triadin_dom	-	no_errors	TRDN	HGNC	ENSG00000186439	tier1			26	0	0.00	18	8	30.77
TRDN	0	genome.wustl.edu	37	6	123786066	123786066	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	6	123786066	123786066	A	C	SNP	TRDN	ENST00000398178	human	ensembl	74_37	-1	known	missense	c.916	p.S306A	0.015	NULL	pfam_Asp-B-hydro/Triadin_dom	-	no_errors	TRDN	HGNC	ENSG00000186439	tier1	-	-	20	0	0.00	28	6	17.65
TRIL	0	genome.wustl.edu	37	7	28996482	28996482	+	RNA	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	28996482	28996482	G	-	DEL	TRIL	ENST00000322982	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.426	-	-	-	no_errors	TRIL	HGNC	ENSG00000176734	tier1			22	0	0.00	66	20	23.26
TRIM25	0	genome.wustl.edu	37	17	54968084	54968085	+	RNA	DEL	AG	AG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	54968084	54968085	AG	-	DEL	TRIM25	ENST00000573108	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	TRIM25	HGNC	ENSG00000121060	tier1			41	0	0.00	18	21	53.85
TRIM33	0	genome.wustl.edu	37	1	115007001	115007001	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	115007001	115007001	A	C	SNP	TRIM33	ENST00000358465	human	ensembl	74_37	-1	known	missense	c.536	p.I179R	1.000	smart_Znf_PHD,smart_Znf_RING,pfscan_Znf_RING	pfam_Bromodomain,pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	TRIM33	HGNC	ENSG00000197323	tier1	-	-	18	0	0.00	23	5	17.86
TRIM36	0	genome.wustl.edu	37	5	114499432	114499432	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	114499432	114499432	G	A	SNP	TRIM36	ENST00000282369	human	ensembl	74_37	-1	known	silent	c.81	p.I27	1.000	NULL	pfam_Znf_B-box,pfam_Fibronectin_type3,pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM36	HGNC	ENSG00000152503	tier1	-	-	27	0	0.00	3	11	78.57
TRIM48	0	genome.wustl.edu	37	11	55035844	55035844	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	55035844	55035844	T	C	SNP	TRIM48	ENST00000417545	human	ensembl	74_37	+1	known	missense	c.574	p.Y192H	0.183	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM48	HGNC	ENSG00000150244	tier1	-	-	104	0	0.00	117	20	14.49
TRIM71	0	genome.wustl.edu	37	3	32932582	32932582	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	32932582	32932582	G	C	SNP	TRIM71	ENST00000383763	human	ensembl	74_37	+1	known	missense	c.1886	p.R629P	1.000	pfam_NHL_repeat,pfscan_NHL_repeat_subgr	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM71	HGNC	ENSG00000206557	tier1	-	-	8	0	0.00	7	12	63.16
TRIO	0	genome.wustl.edu	37	5	14477004	14477004	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	14477004	14477004	T	0	DEL	TRIO	ENST00000344204	human	ensembl	74_37	+1	known	frame_shift_del	c.6085	p.L2031fs	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	TRIO	HGNC	ENSG00000038382				62	0	0.00	147	19	11.45
TSC2	0	genome.wustl.edu	37	16	2131769	2131769	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	2131769	2131769	A	G	SNP	TSC2	ENST00000219476	human	ensembl	74_37	+1	known	missense	c.3784	p.K1262E	1.000	NULL	pfam_Tuberin-type_domain,pfam_Tuberin_N,pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom,prints_Tuberin	-	no_errors	TSC2	HGNC	ENSG00000103197	tier1	-	-	72	0	0.00	94	21	18.26
TSGA10	0	genome.wustl.edu	37	2	99695219	99695219	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	99695219	99695219	G	T	SNP	TSGA10	ENST00000355053	human	ensembl	74_37	-1	known	missense	c.785	p.T262N	0.999	NULL	NULL	-	no_errors	TSGA10	HGNC	ENSG00000135951	tier1	-	-	41	0	0.00	35	25	41.67
TSPAN1	0	genome.wustl.edu	37	1	46650192	46650192	+	RNA	DEL	G	G	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	46650192	46650192	G	-	DEL	TSPAN1	ENST00000482143	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TSPAN1	HGNC	ENSG00000117472	tier1			25	0	0.00	45	13	22.41
TSPAN14	0	genome.wustl.edu	37	10	82279271	82279273	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	82279271	82279273	TTT	-	DEL	TSPAN14	ENST00000265450	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	TSPAN14	HGNC	ENSG00000108219	tier1			87	0	0.00	77	9	10.47
TSPEAR	0	genome.wustl.edu	37	21	45947292	45947292	+	Silent	SNP	T	T	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	21	45947292	45947292	T	G	SNP	TSPEAR	ENST00000323084	human	ensembl	74_37	-1	known	silent	c.1032	p.T344	0.000	pfscan_EAR	pfam_EPTP,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_EAR	-	no_errors	TSPEAR	HGNC	ENSG00000175894	tier1	-	-	34	0	0.00	7	26	78.79
TSPY26P	0	genome.wustl.edu	37	20	30776958	30776958	+	RNA	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	30776958	30776958	A	G	SNP	TSPY26P	ENST00000565928	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.025	-	-	-	no_errors	TSPY26P	HGNC	ENSG00000235217	tier1	-	-	9	0	0.00	15	8	33.33
TSPYL6	0	genome.wustl.edu	37	2	54483060	54483060	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	54483060	54483060	C	T	SNP	TSPYL6	ENST00000317802	human	ensembl	74_37	-1	known	missense	c.229	p.A77T	0.003	NULL	pfam_NAP_family	-	no_errors	TSPYL6	HGNC	ENSG00000178021	tier1	-	-	13	0	0.00	45	10	18.18
TTC21B	0	genome.wustl.edu	37	2	166781085	166781085	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	166781085	166781085	A	T	SNP	TTC21B	ENST00000243344	human	ensembl	74_37	-1	known	missense	c.1490	p.L497Q	1.000	smart_TPR_repeat	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC21B	HGNC	ENSG00000123607	tier1	-	-	34	0	0.00	39	27	40.91
TTC40	0	genome.wustl.edu	37	10	134682866	134682866	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	134682866	134682866	C	T	SNP	TTC40	ENST00000368586	human	ensembl	74_37	-1	putative	missense	c.4522	p.A1508T	0.001	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811	tier1	-	-	18	0	0.00	21	12	36.36
TTF1	0	genome.wustl.edu	37	9	135277540	135277541	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	135277540	135277541	-	T	INS	TTF1	ENST00000334270	human	ensembl	74_37	-1	known	frame_shift_ins	c.669_668	p.K224fs	0.189:0.184	NULL	superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	TTF1	HGNC	ENSG00000125482	tier1			23	0	0.00	46	13	22.03
TTF1	0	genome.wustl.edu	37	9	135277549	135277549	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	135277549	135277549	C	T	SNP	TTF1	ENST00000334270	human	ensembl	74_37	-1	known	silent	c.660	p.K220	0.320	NULL	superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	TTF1	HGNC	ENSG00000125482				25	0	0.00	47	4	7.84
TTLL12	0	genome.wustl.edu	37	22	43570300	43570300	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	43570300	43570300	C	G	SNP	TTLL12	ENST00000216129	human	ensembl	74_37	-1	known	missense	c.1144	p.E382Q	0.888	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL12	HGNC	ENSG00000100304	tier1	-	-	16	0	0.00	31	21	40.38
TTN	0	genome.wustl.edu	37	2	179445156	179445156	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	179445156	179445156	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.59246	p.T19749I	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	33	0	0.00	35	24	40.68
TTN	0	genome.wustl.edu	37	2	179584079	179584079	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	179584079	179584079	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.20306	p.P6769L	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	47	0	0.00	20	24	54.55
TTN-AS1	0	genome.wustl.edu	37	2	179623635	179623635	+	RNA	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	179623635	179623635	T	C	SNP	TTN-AS1	ENST00000610005	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TTN-AS1	HGNC	ENSG00000237298	tier1	-	-	30	0	0.00	19	13	40.62
TTYH2	0	genome.wustl.edu	37	17	72248476	72248476	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	72248476	72248476	T	C	SNP	TTYH2	ENST00000269346	human	ensembl	74_37	+1	known	missense	c.1220	p.I407T	1.000	pfam_Tweety	pfam_Tweety	-	no_errors	TTYH2	HGNC	ENSG00000141540	tier1	-	-	48	0	0.00	33	28	45.90
TUBA3D	0	genome.wustl.edu	37	2	132236889	132236889	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	132236889	132236889	C	T	SNP	TUBA3D	ENST00000321253	human	ensembl	74_37	+1	known	missense	c.235	p.R79C	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Epsilon_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3D	HGNC	ENSG00000075886	tier1	-	-	42	0	0.00	61	10	14.08
TUBGCP6	0	genome.wustl.edu	37	22	50656444	50656444	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	50656444	50656444	C	-	DEL	TUBGCP6	ENST00000248846	human	ensembl	74_37	-1	known	frame_shift_del	c.5271	p.P1759fs	0.000	NULL	pfam_TUBGCP	-	no_errors	TUBGCP6	HGNC	ENSG00000128159	tier1			37	0	0.00	37	17	31.48
TUBGCP6	0	genome.wustl.edu	37	22	50656444	50656444	+	Silent	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	50656444	50656444	C	G	SNP	TUBGCP6	ENST00000248846	human	ensembl	74_37	-1	known	silent	c.5271	p.G1757	0.000	NULL	pfam_TUBGCP	-	no_errors	TUBGCP6	HGNC	ENSG00000128159				37	0	0.00	33	4	7.41
TVP23A	0	genome.wustl.edu	37	16	10867203	10867203	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	10867203	10867203	A	0	DEL	TVP23A	ENST00000299866	human	ensembl	74_37	-1	known	frame_shift_del	c.420	p.F140fs	1.000	pfam_DUF846_euk	pfam_DUF846_euk	-	no_errors	TVP23A	HGNC	ENSG00000166676				12	0	0.00	9	4	30.77
TVP23B	0	genome.wustl.edu	37	17	18694321	18694323	+	In_Frame_Del	DEL	TTG	TTG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	TTG	TTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	18694321	18694323	TTG	-	DEL	TVP23B	ENST00000307767	human	ensembl	74_37	+1	known	in_frame_del	c.208_210	p.L72in_frame_del	1.000:1.000:0.999	pfam_DUF846_euk	pfam_DUF846_euk	-	no_errors	TVP23B	HGNC	ENSG00000171928	tier1			82	0	0.00	84	28	25.00
TVP23C	0	genome.wustl.edu	37	17	15441469	15441469	+	Splice_Site	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	15441469	15441469	C	T	SNP	TVP23C	ENST00000523573	human	ensembl	74_37	-1	known	splice_site	c.162-2	e5-2	0.998	-	-	-	no_errors	TVP23C	HGNC	ENSG00000175106	tier1	-	-	42	0	0.00	80	30	27.27
UBA6	0	genome.wustl.edu	37	4	68499110	68499110	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	68499110	68499110	A	G	SNP	UBA6	ENST00000322244	human	ensembl	74_37	-1	known	missense	c.2095	p.C699R	1.000	superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	pfam_ThiF_NAD_FAD-bd,pfam_Ub-activating_enz_e1_C,pfam_UBact_repeat,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	-	no_errors	UBA6	HGNC	ENSG00000033178	tier1	-	-	32	0	0.00	32	10	23.81
UBAP1	0	genome.wustl.edu	37	9	34241819	34241819	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	34241819	34241819	C	A	SNP	UBAP1	ENST00000545103	human	ensembl	74_37	+1	known	missense	c.988	p.L330M	1.000	NULL	superfamily_UBA-like,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAP1	HGNC	ENSG00000165006	tier1	-	-	41	0	0.00	27	28	50.91
UBBP4	0	genome.wustl.edu	37	17	21731488	21731489	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	21731488	21731489	-	C	INS	UBBP4	ENST00000578713	human	ensembl	74_37	+1	putative	frame_shift_ins	c.563_564	p.D191fs	1.000:1.000	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	UBBP4	HGNC	ENSG00000263563	tier1			64	0	0.00	69	10	12.66
UBE2E1	0	genome.wustl.edu	37	3	23848848	23848850	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	23848848	23848850	AAG	-	DEL	UBE2E1	ENST00000306627	human	ensembl	74_37	+1	known	in_frame_del	c.88_90	p.K32in_frame_del	1.000:1.000:1.000	NULL	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2E1	HGNC	ENSG00000170142	tier1			50	0	0.00	22	19	46.34
UBE2E1	0	genome.wustl.edu	37	3	23848850	23848850	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	23848850	23848850	G	C	SNP	UBE2E1	ENST00000306627	human	ensembl	74_37	+1	known	missense	c.90	p.K30N	1.000	NULL	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2E1	HGNC	ENSG00000170142				50	0	0.00	20	4	16.67
UBE2K	0	genome.wustl.edu	37	4	39780194	39780194	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	39780194	39780194	A	-	DEL	UBE2K	ENST00000438068	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.844	-	-	-	no_errors	UBE2K	HGNC	ENSG00000078140	tier1			31	0	0.00	15	25	62.50
UBR4	0	genome.wustl.edu	37	1	19441999	19441999	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	19441999	19441999	C	A	SNP	UBR4	ENST00000375267	human	ensembl	74_37	-1	known	missense	c.10956	p.Q3652H	1.000	NULL	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR4	HGNC	ENSG00000127481	tier1	-	-	28	0	0.00	15	27	64.29
UBR5	0	genome.wustl.edu	37	8	103289349	103289349	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	103289349	103289349	T	-	DEL	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	frame_shift_del	c.6360	p.E2121fs	0.987	NULL	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517	tier1			106	0	0.00	204	57	21.84
UCK2	0	genome.wustl.edu	37	1	165877338	165877338	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	165877338	165877338	A	-	DEL	UCK2	ENST00000463772	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	UCK2	HGNC	ENSG00000143179	tier1			8	0	0.00	9	4	30.77
UGGT1	0	genome.wustl.edu	37	2	128900742	128900742	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	128900742	128900742	G	A	SNP	UGGT1	ENST00000259253	human	ensembl	74_37	+1	known	silent	c.1794	p.P598	0.084	NULL	pfam_UDP-g_GGtrans	-	no_errors	UGGT1	HGNC	ENSG00000136731	tier1	-	-	71	0	0.00	75	28	27.18
UMOD	0	genome.wustl.edu	37	16	20352508	20352508	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	20352508	20352508	G	A	SNP	UMOD	ENST00000424589	human	ensembl	74_37	-1	known	silent	c.1581	p.G527	0.002	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_ZP_dom,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_ZP_dom,pfscan_EG-like_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	UMOD	HGNC	ENSG00000169344	tier1	-	-	34	0	0.00	37	35	48.61
UNC93B1	0	genome.wustl.edu	37	11	67766770	67766770	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	67766770	67766770	G	A	SNP	UNC93B1	ENST00000227471	human	ensembl	74_37	-1	known	missense	c.560	p.A187V	1.000	pfam_Ion_channel_UNC-93,superfamily_MFS_dom_general_subst_transpt	pfam_Ion_channel_UNC-93,superfamily_MFS_dom_general_subst_transpt	-	no_errors	UNC93B1	HGNC	ENSG00000110057	tier1	-	-	37	0	0.00	53	20	27.40
UPF1	0	genome.wustl.edu	37	19	18967000	18967000	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	18967000	18967000	C	A	SNP	UPF1	ENST00000599848	human	ensembl	74_37	+1	known	missense	c.1748	p.P583H	1.000	pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase	pfam_RNA-helicase_UPF1_UPF2-interct,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase	-	no_errors	UPF1	HGNC	ENSG00000005007	tier1	-	-	53	0	0.00	21	34	61.82
UPF2	0	genome.wustl.edu	37	10	12070974	12070974	+	Silent	SNP	G	G	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	12070974	12070974	G	C	SNP	UPF2	ENST00000356352	human	ensembl	74_37	-1	known	silent	c.915	p.V305	0.998	pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	pfam_MIF4G-like_typ-3,pfam_Up-fram_suppressor-2,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	-	no_errors	UPF2	HGNC	ENSG00000151461	tier1	-	-	20	0	0.00	11	15	57.69
UPF3A	0	genome.wustl.edu	37	13	115057211	115057211	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	115057211	115057211	A	0	DEL	UPF3A	ENST00000375299	human	ensembl	74_37	+1	known	frame_shift_del	c.790	p.E267fs	0.943	NULL	pfam_Nonsense_mediated_decay_UPF3	-	no_errors	UPF3A	HGNC	ENSG00000169062				38	0	0.00	25	13	34.21
USF2	0	genome.wustl.edu	37	19	35770659	35770659	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	35770659	35770659	A	-	DEL	USF2	ENST00000600341	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.089	-	-	-	no_errors	USF2	HGNC	ENSG00000105698	tier1			30	0	0.00	12	8	40.00
USP24	0	genome.wustl.edu	37	1	55591178	55591178	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	55591178	55591178	C	T	SNP	USP24	ENST00000407756	human	ensembl	74_37	-1	known	missense	c.3295	p.D1099N	1.000	NULL	pfam_Peptidase_C19/C67,superfamily_UBA-like,superfamily_ARM-type_fold,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Peptidase_C19/C67	-	no_errors	USP24	HGNC	ENSG00000162402	tier1	-	-	49	0	0.00	29	27	48.21
USP32P1	0	genome.wustl.edu	37	17	16703311	16703312	+	RNA	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	16703311	16703312	0	A	INS	USP32P1	ENST00000341745	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	USP32P1	HGNC	ENSG00000188933				123	0	0.00	193	12	5.85
USP35	0	genome.wustl.edu	37	11	77911710	77911710	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	77911710	77911710	C	-	DEL	USP35	ENST00000529308	human	ensembl	74_37	+1	known	frame_shift_del	c.1053	p.M354fs	0.969	superfamily_ARM-type_fold	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP35	HGNC	ENSG00000118369	tier1			34	0	0.00	40	37	48.05
USP43	0	genome.wustl.edu	37	17	9578294	9578294	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	9578294	9578294	A	G	SNP	USP43	ENST00000285199	human	ensembl	74_37	+1	known	missense	c.827	p.Q276R	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP43	HGNC	ENSG00000154914	tier1	-	-	64	0	0.00	68	51	42.86
USP54	0	genome.wustl.edu	37	10	75277223	75277225	+	In_Frame_Del	DEL	ATG	ATG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	ATG	ATG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	75277223	75277225	ATG	-	DEL	USP54	ENST00000339859	human	ensembl	74_37	-1	known	in_frame_del	c.2961_2959	p.H987in_frame_del	0.001:0.002:0.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP54	HGNC	ENSG00000166348	tier1			48	0	0.00	66	13	16.46
USP6NL	0	genome.wustl.edu	37	10	11504795	11504795	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	11504795	11504795	G	A	SNP	USP6NL	ENST00000379237	human	ensembl	74_37	-1	known	missense	c.2201	p.S734L	0.020	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	USP6NL	HGNC	ENSG00000148429	tier1	-	-	30	0	0.00	9	15	62.50
USP7	0	genome.wustl.edu	37	16	8997206	8997206	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	8997206	8997206	T	A	SNP	USP7	ENST00000344836	human	ensembl	74_37	-1	known	missense	c.1758	p.E586D	1.000	NULL	pfam_Peptidase_C19/C67,pfam_MATH,pfam_USP7_ICP0-binding_dom,superfamily_TRAF-like,smart_MATH,pfscan_MATH,pfscan_Peptidase_C19/C67	-	no_errors	USP7	HGNC	ENSG00000187555	tier1	-	-	23	0	0.00	22	11	33.33
UTP11L	0	genome.wustl.edu	37	1	38483297	38483297	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	38483297	38483297	T	-	DEL	UTP11L	ENST00000488453	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	UTP11L	HGNC	ENSG00000183520	tier1			28	0	0.00	20	9	31.03
UTP14C	0	genome.wustl.edu	37	13	52604834	52604834	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	52604834	52604834	G	A	SNP	UTP14C	ENST00000521776	human	ensembl	74_37	+1	known	missense	c.1894	p.E632K	0.982	pfam_SSU_processome_Utp14	pfam_SSU_processome_Utp14	-	no_errors	UTP14C	HGNC	ENSG00000253797	tier1	-	-	40	0	0.00	36	24	40.00
VAV2	0	genome.wustl.edu	37	9	136726534	136726534	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	136726534	136726534	C	T	SNP	VAV2	ENST00000371850	human	ensembl	74_37	-1	known	silent	c.342	p.R114	0.233	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_DH-domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH3_domain,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH2,prints_SH3_domain	-	no_errors	VAV2	HGNC	ENSG00000160293	tier1	-	-	23	0	0.00	18	10	35.71
VAX2	0	genome.wustl.edu	37	2	71160174	71160174	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	71160174	71160174	C	-	DEL	VAX2	ENST00000234392	human	ensembl	74_37	+1	known	frame_shift_del	c.713	p.P240fs	0.296	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	VAX2	HGNC	ENSG00000116035	tier1			26	0	0.00	50	29	36.71
VCAM1	0	genome.wustl.edu	37	1	101194932	101194932	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	101194932	101194932	C	A	SNP	VCAM1	ENST00000294728	human	ensembl	74_37	+1	known	missense	c.1198	p.L400I	0.170	smart_Ig_sub	pfam_Ig_I-set,pfam_Ig_C2-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom,prints_VCAM-1,prints_ICAM_VCAM_N	-	no_errors	VCAM1	HGNC	ENSG00000162692	tier1	-	-	39	0	0.00	27	23	46.00
VEGFC	0	genome.wustl.edu	37	4	177632776	177632777	+	Frame_Shift_Ins	INS	-	-	GA			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	177632776	177632777	-	GA	INS	VEGFC	ENST00000280193	human	ensembl	74_37	-1	known	frame_shift_ins	c.581_580	p.Q194fs	1.000:1.000	pfam_PDGF/VEGF_dom,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	pfam_PDGF/VEGF_dom,pfam_CXCXC_repeat,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	-	no_errors	VEGFC	HGNC	ENSG00000150630	tier1			45	0	0.00	40	14	25.93
VPS13C	0	genome.wustl.edu	37	15	62202414	62202414	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	62202414	62202414	G	A	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	nonsense	c.8806	p.R2936*	0.038	pfam_VPSAP_dom	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	tier1	rs148074630	-	19	0	0.00	1	16	94.12
VPS9D1	0	genome.wustl.edu	37	16	89777228	89777228	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	89777228	89777228	C	T	SNP	VPS9D1	ENST00000389386	human	ensembl	74_37	-1	known	missense	c.1024	p.A342T	0.005	NULL	pfam_VPS9,smart_VPS9_subgr,pfscan_VPS9	-	no_errors	VPS9D1	HGNC	ENSG00000075399	tier1	-	-	15	0	0.00	16	14	45.16
VSTM2A	0	genome.wustl.edu	37	7	54617880	54617880	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	54617880	54617880	C	T	SNP	VSTM2A	ENST00000402026	human	ensembl	74_37	+1	known	silent	c.648	p.F216	0.999	NULL	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	VSTM2A	HGNC	ENSG00000170419				12	0	0.00	19	4	17.39
VTI1A	0	genome.wustl.edu	37	10	114220329	114220329	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	114220329	114220329	A	C	SNP	VTI1A	ENST00000393077	human	ensembl	74_37	+1	known	missense	c.141	p.E47D	1.000	pfam_Vesicle_trsprt_v-SNARE_N,superfamily_t-SNARE	pfam_Vesicle_trsprt_v-SNARE_N,superfamily_t-SNARE,smart_T_SNARE_dom	-	no_errors	VTI1A	HGNC	ENSG00000151532	tier1	-	-	19	0	0.00	16	4	20.00
WAPAL	0	genome.wustl.edu	37	10	88195258	88195260	+	RNA	DEL	GTT	GTT	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	GTT	GTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	88195258	88195260	GTT	-	DEL	WAPAL	ENST00000484070	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000:1.000	-	-	-	no_errors	WAPAL	HGNC	ENSG00000062650	tier1			36	0	0.00	40	11	21.57
WASF3	0	genome.wustl.edu	37	13	27256953	27256953	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	13	27256953	27256953	C	T	SNP	WASF3	ENST00000335327	human	ensembl	74_37	+1	known	missense	c.1193	p.P398L	0.991	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF3	HGNC	ENSG00000132970	tier1	-	-	12	0	0.00	11	10	47.62
WBP2NL	0	genome.wustl.edu	37	22	42399163	42399166	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	42399163	42399166	AAAA	-	DEL	WBP2NL	ENST00000461730	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.027:0.025:0.028:0.037	-	-	-	no_errors	WBP2NL	HGNC	ENSG00000183066	tier1			51	0	0.00	41	14	25.45
WDFY3	0	genome.wustl.edu	37	4	85658516	85658516	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	85658516	85658516	C	T	SNP	WDFY3	ENST00000295888	human	ensembl	74_37	-1	known	missense	c.6578	p.R2193H	1.000	NULL	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl_sf,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625	tier1	-	-	23	0	0.00	4	6	60.00
WDR19	0	genome.wustl.edu	37	4	39230210	39230212	+	In_Frame_Del	DEL	AAC	AAC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AAC	AAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	39230210	39230212	AAC	-	DEL	WDR19	ENST00000399820	human	ensembl	74_37	+1	known	in_frame_del	c.1882_1884	p.N629in_frame_del	1.000:1.000:1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR19	HGNC	ENSG00000157796	tier1			41	0	0.00	76	7	8.43
WDR7	0	genome.wustl.edu	37	18	54348614	54348614	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	54348614	54348614	G	A	SNP	WDR7	ENST00000254442	human	ensembl	74_37	+1	known	missense	c.337	p.G113S	1.000	superfamily_Quinonprotein_ADH-like_supfam	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR7	HGNC	ENSG00000091157	tier1	-	-	36	0	0.00	41	12	22.64
WDR81	0	genome.wustl.edu	37	17	1628919	1628919	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	1628919	1628919	G	T	SNP	WDR81	ENST00000409644	human	ensembl	74_37	+1	known	missense	c.666	p.E222D	0.998	superfamily_Kinase-like_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Kinase-like_dom,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR81	HGNC	ENSG00000167716	tier1	-	-	23	0	0.00	17	10	37.04
WHAMMP2	0	genome.wustl.edu	37	15	28996727	28996727	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	15	28996727	28996727	G	A	SNP	WHAMMP2	ENST00000508764	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.206	-	-	-	no_errors	WHAMMP2	HGNC	ENSG00000248334	tier1	-	-	23	0	0.00	10	20	66.67
WRN	0	genome.wustl.edu	37	8	30921934	30921934	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	30921934	30921934	C	T	SNP	WRN	ENST00000298139	human	ensembl	74_37	+1	known	silent	c.339	p.H113	0.998	pfam_3'-5'_exonuclease_dom,superfamily_RNaseH-like_dom,smart_3'-5'_exonuclease_dom	pfam_3'-5'_exonuclease_dom,pfam_Helicase_C,pfam_RQC_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	WRN	HGNC	ENSG00000165392	tier1	-	-	89	0	0.00	70	24	25.53
WWP2	0	genome.wustl.edu	37	16	69820935	69820935	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	69820935	69820935	C	T	SNP	WWP2	ENST00000356003	human	ensembl	74_37	+1	known	missense	c.22	p.R8W	1.000	NULL	pfam_HECT,pfam_WW_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_WW_dom	-	no_errors	WWP2	HGNC	ENSG00000198373	tier1	rs142617495	-	25	0	0.00	22	16	42.11
XIRP2	0	genome.wustl.edu	37	2	168107566	168107566	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	168107566	168107566	C	T	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	missense	c.9664	p.R3222C	0.422	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092	tier1	-	-	12	0	0.00	17	5	22.73
XIST	0	genome.wustl.edu	37	X	73068387	73068387	+	RNA	SNP	C	C	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	73068387	73068387	C	G	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	tier1	-	-	12	0	0.00	11	8	42.11
XKR7	0	genome.wustl.edu	37	20	30584487	30584487	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	30584487	30584487	G	A	SNP	XKR7	ENST00000562532	human	ensembl	74_37	+1	known	missense	c.967	p.V323I	1.000	pfam_Transport_prot_XK	pfam_Transport_prot_XK	-	no_errors	XKR7	HGNC	ENSG00000260903	tier1	-	-	45	0	0.00	31	46	59.74
XRRA1	0	genome.wustl.edu	37	11	74656099	74656099	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	74656099	74656099	T	-	DEL	XRRA1	ENST00000524430	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	XRRA1	HGNC	ENSG00000166435	tier1			28	0	0.00	22	13	37.14
ZBED4	0	genome.wustl.edu	37	22	50278015	50278017	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	22	50278015	50278017	CTC	-	DEL	ZBED4	ENST00000216268	human	ensembl	74_37	+1	known	in_frame_del	c.705_707	p.S237in_frame_del	0.000:0.167:0.230	NULL	pfam_Znf_BED_prd,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED4	HGNC	ENSG00000100426	tier1			18	0	0.00	58	7	10.77
ZBTB4	0	genome.wustl.edu	37	17	7369187	7369187	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	17	7369187	7369187	C	T	SNP	ZBTB4	ENST00000311403	human	ensembl	74_37	-1	known	missense	c.934	p.A312T	0.998	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB4	HGNC	ENSG00000174282	tier1	-	-	45	0	0.00	99	25	20.16
ZC3H11A	0	genome.wustl.edu	37	1	203770930	203770930	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	203770930	203770930	T	-	DEL	ZC3H11A	ENST00000461980	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ZC3H11A	HGNC	ENSG00000058673	tier1			97	0	0.00	87	13	13.00
ZC3H18	0	genome.wustl.edu	37	16	88691141	88691141	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	88691141	88691141	C	-	DEL	ZC3H18	ENST00000301011	human	ensembl	74_37	+1	known	frame_shift_del	c.2030	p.R680fs	0.568	NULL	smart_Znf_CCCH	-	no_errors	ZC3H18	HGNC	ENSG00000158545	tier1			19	0	0.00	30	10	25.00
ZC3H3	0	genome.wustl.edu	37	8	144621036	144621037	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	8	144621036	144621037	0	G	INS	ZC3H3	ENST00000262577	human	ensembl	74_37	-1	known	frame_shift_ins	c.501_500	p.R168fs	0.011:0.048	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H3	HGNC	ENSG00000014164				41	0	0.00	160	20	11.11
ZC3HAV1	0	genome.wustl.edu	37	7	138749694	138749695	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	138749694	138749695	AG	-	DEL	ZC3HAV1	ENST00000242351	human	ensembl	74_37	-1	known	frame_shift_del	c.1924_1923	p.Y642fs	0.035:0.001	pfscan_WWE-dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	ZC3HAV1	HGNC	ENSG00000105939	tier1			32	0	0.00	40	7	14.89
ZDBF2	0	genome.wustl.edu	37	2	207174428	207174428	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	207174428	207174428	A	-	DEL	ZDBF2	ENST00000374423	human	ensembl	74_37	+1	known	frame_shift_del	c.5176	p.K1728fs	0.000	NULL	pfam_Znf_DBF,smart_Znf_DBF	-	no_errors	ZDBF2	HGNC	ENSG00000204186	tier1			15	0	0.00	10	9	47.37
ZDHHC16	0	genome.wustl.edu	37	10	99215505	99215507	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	99215505	99215507	AAG	-	DEL	ZDHHC16	ENST00000370854	human	ensembl	74_37	+1	known	in_frame_del	c.913_915	p.K306in_frame_del	1.000:0.988:0.995	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC16	HGNC	ENSG00000171307	tier1			47	0	0.00	48	12	20.00
ZEB1	0	genome.wustl.edu	37	10	31810288	31810288	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	10	31810288	31810288	A	G	SNP	ZEB1	ENST00000361642	human	ensembl	74_37	+1	known	silent	c.2028	p.V676	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZEB1	HGNC	ENSG00000148516	tier1	-	-	18	0	0.00	8	7	46.67
ZEB2	0	genome.wustl.edu	37	2	145156467	145156467	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	2	145156467	145156467	G	A	SNP	ZEB2	ENST00000303660	human	ensembl	74_37	-1	known	missense	c.2287	p.P763S	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZEB2	HGNC	ENSG00000169554	tier1	-	-	44	0	0.00	29	20	40.82
ZFHX3	0	genome.wustl.edu	37	16	72845811	72845811	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	72845811	72845811	G	A	SNP	ZFHX3	ENST00000268489	human	ensembl	74_37	-1	known	missense	c.3656	p.P1219L	0.048	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836	tier1	-	-	31	0	0.00	22	18	45.00
ZFP1	0	genome.wustl.edu	37	16	75203737	75203737	+	Silent	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	75203737	75203737	G	A	SNP	ZFP1	ENST00000393430	human	ensembl	74_37	+1	known	silent	c.729	p.P243	0.022	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP1	HGNC	ENSG00000184517	tier1	-	-	36	0	0.00	25	13	34.21
ZFR	0	genome.wustl.edu	37	5	32404161	32404161	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	32404161	32404161	T	0	DEL	ZFR	ENST00000265069	human	ensembl	74_37	-1	known	frame_shift_del	c.1074	p.E359fs	1.000	smart_Znf_U1	pfam_DZF,pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like,smart_DZF	-	no_errors	ZFR	HGNC	ENSG00000056097				108	0	0.00	210	22	9.48
ZMAT1	0	genome.wustl.edu	37	X	101138439	101138439	+	RNA	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	101138439	101138439	T	-	DEL	ZMAT1	ENST00000494068	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZMAT1	HGNC	ENSG00000166432	tier1			16	0	0.00	10	18	64.29
ZMYM4	0	genome.wustl.edu	37	1	35846959	35846960	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	35846959	35846960	-	A	INS	ZMYM4	ENST00000314607	human	ensembl	74_37	+1	known	frame_shift_ins	c.1281_1282	p.P430fs	0.987:1.000	NULL	pfam_DUF3504,pfam_Znf_MYM,smart_TRASH_dom	-	no_errors	ZMYM4	HGNC	ENSG00000146463	tier1			27	0	0.00	32	12	27.27
ZMYND19	0	genome.wustl.edu	37	9	140481423	140481423	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	9	140481423	140481423	G	A	SNP	ZMYND19	ENST00000298585	human	ensembl	74_37	-1	known	nonsense	c.355	p.Q119*	1.000	NULL	pfam_Znf_MYND,pfscan_Znf_MYND	-	no_errors	ZMYND19	HGNC	ENSG00000165724	tier1	-	-	28	0	0.00	29	23	44.23
ZMYND8	0	genome.wustl.edu	37	20	45867410	45867410	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	20	45867410	45867410	A	-	DEL	ZMYND8	ENST00000468376	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZMYND8	HGNC	ENSG00000101040	tier1			31	0	0.00	40	7	14.89
ZNF114	0	genome.wustl.edu	37	19	48789818	48789818	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	48789818	48789818	T	-	DEL	ZNF114	ENST00000315849	human	ensembl	74_37	+1	known	frame_shift_del	c.937	p.Y315fs	0.070	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF114	HGNC	ENSG00000178150	tier1			15	0	0.00	4	7	63.64
ZNF300	0	genome.wustl.edu	37	5	150275828	150275828	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	150275828	150275828	A	G	SNP	ZNF300	ENST00000446148	human	ensembl	74_37	-1	known	missense	c.1021	p.Y341H	0.888	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF300	HGNC	ENSG00000145908	tier1	-	-	46	0	0.00	37	11	22.92
ZNF317	0	genome.wustl.edu	37	19	9271738	9271738	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	9271738	9271738	C	T	SNP	ZNF317	ENST00000247956	human	ensembl	74_37	+1	known	missense	c.1417	p.R473C	0.892	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF317	HGNC	ENSG00000130803				21	0	0.00	24	3	11.11
ZNF385D	0	genome.wustl.edu	37	3	22413997	22413997	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	3	22413997	22413997	G	A	SNP	ZNF385D	ENST00000494108	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	ZNF385D	HGNC	ENSG00000151789	tier1	-	-	34	0	0.00	19	21	52.50
ZNF407	0	genome.wustl.edu	37	18	72343072	72343072	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	18	72343072	72343072	G	A	SNP	ZNF407	ENST00000299687	human	ensembl	74_37	+1	known	missense	c.97	p.G33S	0.060	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,smart_Znf_U1,pfscan_Znf_C2H2	-	no_errors	ZNF407	HGNC	ENSG00000215421	tier1	-	-	47	0	0.00	26	18	40.91
ZNF41	0	genome.wustl.edu	37	X	47307383	47307383	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	X	47307383	47307383	C	T	SNP	ZNF41	ENST00000397050	human	ensembl	74_37	-1	known	missense	c.1816	p.V606M	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF41	HGNC	ENSG00000147124	tier1	-	-	19	0	0.00	7	14	66.67
ZNF608	0	genome.wustl.edu	37	5	123972786	123972786	+	RNA	DEL	A	A	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	123972786	123972786	A	-	DEL	ZNF608	ENST00000513985	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	ZNF608	HGNC	ENSG00000168916	tier1			27	0	0.00	13	8	38.10
ZNF608	0	genome.wustl.edu	37	5	124036909	124036909	+	Silent	SNP	G	G	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	5	124036909	124036909	G	T	SNP	ZNF608	ENST00000306315	human	ensembl	74_37	-1	known	silent	c.960	p.L320	1.000	NULL	NULL	-	no_errors	ZNF608	HGNC	ENSG00000168916				49	0	0.00	56	3	5.08
ZNF629	0	genome.wustl.edu	37	16	30794962	30794962	+	Silent	SNP	C	C	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	16	30794962	30794962	C	T	SNP	ZNF629	ENST00000262525	human	ensembl	74_37	-1	known	silent	c.687	p.T229	0.999	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF629	HGNC	ENSG00000102870	tier1	-	-	56	0	0.00	69	33	32.35
ZNF644	0	genome.wustl.edu	37	1	91381965	91381965	+	RNA	SNP	A	A	T			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	91381965	91381965	A	T	SNP	ZNF644	ENST00000467231	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZNF644	HGNC	ENSG00000122482	tier1	-	-	31	0	0.00	18	14	43.75
ZNF644	0	genome.wustl.edu	37	1	91382292	91382293	+	RNA	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	91382292	91382293	-	A	INS	ZNF644	ENST00000467231	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.373:1.000	-	-	-	no_errors	ZNF644	HGNC	ENSG00000122482	tier1			21	0	0.00	21	9	30.00
ZNF644	0	genome.wustl.edu	37	1	91403430	91403432	+	In_Frame_Del	DEL	ACG	ACG	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	ACG	ACG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	1	91403430	91403432	ACG	-	DEL	ZNF644	ENST00000337393	human	ensembl	74_37	-1	known	in_frame_del	c.3300_3298	p.R1100in_frame_del	1.000:1.000:1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF644	HGNC	ENSG00000122482	tier1			48	0	0.00	49	6	10.91
ZNF667-AS1	0	genome.wustl.edu	37	19	57006425	57006425	+	RNA	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	57006425	57006425	G	A	SNP	ZNF667-AS1	ENST00000299997	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ZNF667-AS1	HGNC	ENSG00000166770	tier1	-	-	68	0	0.00	18	39	68.42
ZNF721	0	genome.wustl.edu	37	4	435768	435768	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	4	435768	435768	T	C	SNP	ZNF721	ENST00000511833	human	ensembl	74_37	-1	known	missense	c.2488	p.I830V	0.998	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF721	HGNC	ENSG00000182903	tier1	-	-	38	0	0.00	34	36	51.43
ZNF733P	0	genome.wustl.edu	37	7	62752759	62752759	+	RNA	SNP	T	T	C			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	62752759	62752759	T	C	SNP	ZNF733P	ENST00000331425	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZNF733P	HGNC	ENSG00000185037	tier1	-	-	35	0	0.00	22	8	26.67
ZNF746	0	genome.wustl.edu	37	7	149172342	149172342	+	Silent	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	149172342	149172342	A	G	SNP	ZNF746	ENST00000458143	human	ensembl	74_37	-1	known	silent	c.1071	p.G357	0.000	NULL	pfam_Znf_C2H2,pfam_DUF3669_Znf,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF746	HGNC	ENSG00000181220	tier1	-	-	39	0	0.00	60	31	34.07
ZNF804B	0	genome.wustl.edu	37	7	88956723	88956724	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	7	88956723	88956724	-	A	INS	ZNF804B	ENST00000333190	human	ensembl	74_37	+1	known	frame_shift_ins	c.315_316	p.Q107fs	0.992:1.000	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804B	HGNC	ENSG00000182348	tier1			36	0	0.00	28	10	26.32
ZNF845	0	genome.wustl.edu	37	19	53854383	53854383	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	53854383	53854383	A	G	SNP	ZNF845	ENST00000458035	human	ensembl	74_37	+1	known	missense	c.455	p.H152R	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF845	HGNC	ENSG00000213799	tier1	-	-	61	0	0.00	49	17	25.76
ZNF878	0	genome.wustl.edu	37	19	12157236	12157236	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	19	12157236	12157236	T	-	DEL	ZNF878	ENST00000602107	human	ensembl	74_37	-1	known	frame_shift_del	c.279	p.K93fs	0.000	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF878	HGNC	ENSG00000257446	tier1			60	0	0.00	61	14	18.67
ZW10	0	genome.wustl.edu	37	11	113639628	113639628	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43J-01A-12D-A247-09	TCGA-L5-A43J-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	339fc9a4-1aa8-43cc-9228-0f3b9062fa21	f88aa7fe-2469-421c-8fc0-fc46a9b21611	11	113639628	113639628	G	A	SNP	ZW10	ENST00000200135	human	ensembl	74_37	-1	known	missense	c.167	p.A56V	1.000	pfam_RZZ-complex_Zw10	pfam_RZZ-complex_Zw10	-	no_errors	ZW10	HGNC	ENSG00000086827	tier1	rs201149106	-	29	0	0.00	33	25	43.10
