Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ACLY	0	genome.wustl.edu	37	17	40027984	40027984	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	17	40027984	40027984	C	A	SNP	ACLY	ENST00000352035	human	ensembl	74_37	-1	known	missense	c.2895	p.K965N	0.998	pfam_Citrate_synthase-like,superfamily_Citrate_synthase-like_core,pirsf_ATP-citrate_synthase	pfam_Citrate_synthase-like,pfam_CoA_ligase,pfam_CoA-bd,pfam_ATP-grasp_succ-CoA_synth-type,superfamily_Citrate_synthase-like_core,superfamily_Succinyl-CoA_synth-like,smart_CoA-bd,pirsf_ATP-citrate_synthase	-	no_errors	ACLY	HGNC	ENSG00000131473	tier1	-	-	95	0	0.00	54	13	19.40
ACOT4	0	genome.wustl.edu	37	14	74058892	74058892	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	14	74058892	74058892	C	G	SNP	ACOT4	ENST00000326303	human	ensembl	74_37	+1	known	missense	c.229	p.P77A	1.000	pfam_Thio_Ohase/aa_AcTrfase,pirsf_Acyl-CoA_thioEstase_long-chain	pfam_BAAT_C,pfam_Thio_Ohase/aa_AcTrfase,pirsf_Acyl-CoA_thioEstase_long-chain	-	no_errors	ACOT4	HGNC	ENSG00000177465	tier1	-	-	39	0	0.00	9	5	35.71
ADAM30	0	genome.wustl.edu	37	1	120437095	120437095	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	1	120437095	120437095	T	-	DEL	ADAM30	ENST00000369400	human	ensembl	74_37	-1	known	frame_shift_del	c.1865	p.N622fs	0.000	smart_ADAM_Cys-rich	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM30	HGNC	ENSG00000134249	tier1			51	0	0.00	22	3	12.00
ALKBH8	0	genome.wustl.edu	37	11	107375398	107375398	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	11	107375398	107375398	G	A	SNP	ALKBH8	ENST00000417449	human	ensembl	74_37	-1	known	missense	c.1990	p.L664F	0.998	NULL	pfam_Methyltransf_11,pfam_AlkB_hom8_N,pfam_Oxoglu/Fe-dep_dioxygenase,pfam_Methyltransferase-rel	-	no_errors	ALKBH8	HGNC	ENSG00000137760				46	0	0.00	43	3	6.52
ALMS1P	0	genome.wustl.edu	37	2	73912287	73912287	+	RNA	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	2	73912287	73912287	G	T	SNP	ALMS1P	ENST00000450720	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	ALMS1P	HGNC	ENSG00000163016				28	0	0.00	13	4	23.53
APOB	0	genome.wustl.edu	37	2	21231540	21231540	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	2	21231540	21231540	G	T	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.8200	p.P2734T	0.994	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674				37	0	0.00	14	2	12.50
ARHGEF15	0	genome.wustl.edu	37	17	8222388	8222388	+	Silent	SNP	G	G	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	17	8222388	8222388	G	A	SNP	ARHGEF15	ENST00000361926	human	ensembl	74_37	+1	known	silent	c.2097	p.P699	0.418	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF15	HGNC	ENSG00000198844	tier1	-	-	18	0	0.00	17	7	29.17
ARSF	0	genome.wustl.edu	37	X	3030501	3030501	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	X	3030501	3030501	G	C	SNP	ARSF	ENST00000359361	human	ensembl	74_37	+1	known	missense	c.1677	p.R559S	0.000	superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSF	HGNC	ENSG00000062096	tier1	-	-	57	0	0.00	26	9	25.71
ASMT	0	genome.wustl.edu	37	X	1748766	1748766	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	X	1748766	1748766	G	A	SNP	ASMT	ENST00000381241	human	ensembl	74_37	+1	known	missense	c.496	p.V166I	0.999	pfam_O_MeTrfase_2,pirsf_COMT	pfam_O_MeTrfase_2,pirsf_COMT	-	no_errors	ASMT	HGNC	ENSG00000196433	tier1	-	-	203	0	0.00	131	23	14.94
BARHL1	0	genome.wustl.edu	37	9	135458334	135458334	+	Silent	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	9	135458334	135458334	G	T	SNP	BARHL1	ENST00000263610	human	ensembl	74_37	+1	known	silent	c.150	p.S50	0.932	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	BARHL1	HGNC	ENSG00000125492	tier1	-	-	64	0	0.00	31	6	15.79
C7orf13	0	genome.wustl.edu	37	7	156432831	156432831	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	7	156432831	156432831	C	A	SNP	C7orf13	ENST00000333319	human	ensembl	74_37	-1	known	missense	c.518	p.G173V	0.002	NULL	NULL	-	no_errors	C7orf13	HGNC	ENSG00000244291				38	0	0.00	26	3	10.34
CACNA1G	0	genome.wustl.edu	37	17	48696187	48696187	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	17	48696187	48696187	C	A	SNP	CACNA1G	ENST00000359106	human	ensembl	74_37	+1	known	missense	c.5599	p.L1867I	1.000	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1G	HGNC	ENSG00000006283	tier1	-	-	77	0	0.00	38	5	11.63
CAPSL	0	genome.wustl.edu	37	5	35921208	35921208	+	Silent	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	5	35921208	35921208	C	T	SNP	CAPSL	ENST00000397366	human	ensembl	74_37	-1	known	silent	c.15	p.A5	0.097	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,prints_Recoverin,pfscan_EF_hand_dom	-	no_errors	CAPSL	HGNC	ENSG00000152611	tier1	-	-	82	0	0.00	36	10	21.74
CDC45	0	genome.wustl.edu	37	22	19496146	19496146	+	Silent	SNP	G	G	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	22	19496146	19496146	G	A	SNP	CDC45	ENST00000437685	human	ensembl	74_37	+1	known	silent	c.1245	p.L415	0.999	pfam_CDC45	pfam_CDC45	-	no_errors	CDC45	HGNC	ENSG00000093009	tier1	-	-	68	0	0.00	52	4	7.14
CERK	0	genome.wustl.edu	37	22	47103869	47103869	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	22	47103869	47103869	C	A	SNP	CERK	ENST00000216264	human	ensembl	74_37	-1	known	nonsense	c.586	p.G196*	1.000	pfam_Diacylglycerol_kinase_cat_dom,superfamily_ATP-NAD_kinase_PpnK-typ,smart_Diacylglycerol_kinase_cat_dom	pfam_Diacylglycerol_kinase_cat_dom,superfamily_ATP-NAD_kinase_PpnK-typ,smart_Diacylglycerol_kinase_cat_dom	-	no_errors	CERK	HGNC	ENSG00000100422				86	0	0.00	40	3	6.98
CKAP5	0	genome.wustl.edu	37	11	46776437	46776437	+	Splice_Site	SNP	C	C	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	11	46776437	46776437	C	A	SNP	CKAP5	ENST00000415402	human	ensembl	74_37	-1	known	splice_site	c.4869+1	e35+1	1.000	-	-	-	no_errors	CKAP5	HGNC	ENSG00000175216	tier1	-	-	91	0	0.00	73	12	14.12
CLUH	0	genome.wustl.edu	37	17	2607801	2607801	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	17	2607801	2607801	G	A	SNP	CLUH	ENST00000435359	human	ensembl	74_37	-1	known	missense	c.44	p.A15V	0.915	NULL	superfamily_GSKIP_dom	-	no_errors	CLUH	HGNC	ENSG00000132361				71	0	0.00	33	2	5.71
COPS7B	0	genome.wustl.edu	37	2	232659056	232659056	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	2	232659056	232659056	A	T	SNP	COPS7B	ENST00000350033	human	ensembl	74_37	+1	known	missense	c.322	p.M108L	1.000	pfam_PCI_dom,smart_PCI_dom	pfam_PCI_dom,smart_PCI_dom	-	no_errors	COPS7B	HGNC	ENSG00000144524	tier1	-	-	79	0	0.00	37	10	21.28
CORO7-PAM16	0	genome.wustl.edu	37	16	4414633	4414633	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	16	4414633	4414633	C	T	SNP	CORO7-PAM16	ENST00000572467	human	ensembl	74_37	-1	known	missense	c.1102	p.D368N	0.003	pfam_DUF1900	pfam_DUF1900,pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO7-PAM16	HGNC	ENSG00000103426	tier1	-	-	44	0	0.00	21	5	19.23
CPB2	0	genome.wustl.edu	37	13	46652979	46652979	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	13	46652979	46652979	G	C	SNP	CPB2	ENST00000181383	human	ensembl	74_37	-1	known	missense	c.442	p.H148D	1.000	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPB2	HGNC	ENSG00000080618	tier1	-	-	36	0	0.00	28	8	22.22
CRYZL1	0	genome.wustl.edu	37	21	35003857	35003857	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	21	35003857	35003857	T	C	SNP	CRYZL1	ENST00000381554	human	ensembl	74_37	-1	known	missense	c.1	p.M1V	1.000	superfamily_GroES-like	pfam_ADH_C,pfam_ADH_GroES-like,superfamily_GroES-like,smart_PKS_ER	-	no_errors	CRYZL1	HGNC	ENSG00000205758	tier1	-	-	46	0	0.00	24	12	33.33
CSPG4	0	genome.wustl.edu	37	15	75970175	75970175	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	15	75970175	75970175	C	A	SNP	CSPG4	ENST00000308508	human	ensembl	74_37	-1	known	missense	c.5003	p.W1668L	1.000	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	-	no_errors	CSPG4	HGNC	ENSG00000173546	tier1	-	-	66	0	0.00	30	6	16.67
DHRS2	0	genome.wustl.edu	37	14	24111042	24111043	+	RNA	INS	-	-	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	14	24111042	24111043	-	A	INS	DHRS2	ENST00000553896	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	DHRS2	HGNC	ENSG00000100867	tier1			32	0	0.00	11	2	15.38
DHX15	0	genome.wustl.edu	37	4	24531252	24531252	+	Silent	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	4	24531252	24531252	G	T	SNP	DHX15	ENST00000336812	human	ensembl	74_37	-1	known	silent	c.2242	p.R748	1.000	pfam_DUF1605	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX15	HGNC	ENSG00000109606	tier1	-	-	68	0	0.00	66	4	5.71
DLL3	0	genome.wustl.edu	37	19	39994766	39994766	+	Silent	SNP	A	A	G			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	19	39994766	39994766	A	G	SNP	DLL3	ENST00000205143	human	ensembl	74_37	+1	known	silent	c.708	p.E236	0.934	pfam_EGF_extracell,smart_EG-like_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_EGF_extracell,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	DLL3	HGNC	ENSG00000090932	tier1	-	-	53	0	0.00	27	5	15.62
DNAH10	0	genome.wustl.edu	37	12	124352662	124352662	+	Silent	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	12	124352662	124352662	G	T	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	silent	c.7161	p.L2387	0.984	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653				68	0	0.00	35	3	7.89
DNAJA2	0	genome.wustl.edu	37	16	46992949	46992949	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	16	46992949	46992949	G	T	SNP	DNAJA2	ENST00000317089	human	ensembl	74_37	-1	known	missense	c.1013	p.P338H	1.000	pfam_DnaJ_C,superfamily_HSP40/DnaJ_pept-bd	pfam_DnaJ_C,pfam_DnaJ_domain,pfam_HSP_DnaJ_Cys-rich_dom,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,superfamily_HSP_DnaJ_Cys-rich_dom,smart_DnaJ_domain,pfscan_DnaJ_domain,pfscan_HSP_DnaJ_Cys-rich_dom,prints_DnaJ_domain	-	no_errors	DNAJA2	HGNC	ENSG00000069345				37	0	0.00	11	2	15.38
DOK4	0	genome.wustl.edu	37	16	57507333	57507333	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	16	57507333	57507333	G	T	SNP	DOK4	ENST00000340099	human	ensembl	74_37	-1	known	missense	c.937	p.P313T	0.009	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	-	no_errors	DOK4	HGNC	ENSG00000125170				91	0	0.00	40	4	9.09
DPF3	0	genome.wustl.edu	37	14	73181155	73181155	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	14	73181155	73181155	G	-	DEL	DPF3	ENST00000366353	human	ensembl	74_37	-1	known	frame_shift_del	c.745	p.H249fs	0.998	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	DPF3	HGNC	ENSG00000205683	tier1			51	0	0.00	15	2	11.76
ENSG00000221096	0	genome.wustl.edu	37	15	59443246	59443246	+	RNA	SNP	A	A	G			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	15	59443246	59443246	A	G	SNP	ENSG00000221096	ENST00000408169	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	AC092757.1	Clone_based_ensembl_gene	ENSG00000221096	tier1	-	-	19	0	0.00	7	6	46.15
ENSG00000236957	0	genome.wustl.edu	37	1	157899339	157899339	+	RNA	SNP	G	G	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	1	157899339	157899339	G	A	SNP	ENSG00000236957	ENST00000422062	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-451O13.1	Clone_based_vega_gene	ENSG00000236957				66	0	0.00	34	3	8.11
ENSG00000249846	0	genome.wustl.edu	37	3	129838380	129838383	+	RNA	DEL	AGAA	AGAA	-			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	AGAA	AGAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	3	129838380	129838383	AGAA	-	DEL	ENSG00000249846	ENST00000504808	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.016:0.012:0.011:0.011	-	-	-	no_errors	RP11-77P16.4	Clone_based_vega_gene	ENSG00000249846	tier1			15	0	0.00	3	4	57.14
ERN2	0	genome.wustl.edu	37	16	23707240	23707240	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	16	23707240	23707240	C	T	SNP	ERN2	ENST00000256797	human	ensembl	74_37	-1	known	missense	c.1729	p.G577R	0.999	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_KEN_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like_supfam,smart_PQQ_beta_propeller_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PUG-dom,pfscan_Prot_kinase_dom	-	no_errors	ERN2	HGNC	ENSG00000134398	tier1	-	-	87	0	0.00	46	16	25.81
FAM124B	0	genome.wustl.edu	37	2	225265849	225265849	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	2	225265849	225265849	C	A	SNP	FAM124B	ENST00000409685	human	ensembl	74_37	-1	known	missense	c.637	p.G213C	1.000	NULL	NULL	-	no_errors	FAM124B	HGNC	ENSG00000124019	tier1	-	-	45	0	0.00	29	6	17.14
FHOD3	0	genome.wustl.edu	37	18	34092450	34092450	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	18	34092450	34092450	G	T	SNP	FHOD3	ENST00000257209	human	ensembl	74_37	+1	known	missense	c.455	p.C152F	1.000	superfamily_ARM-type_fold	pfam_FH2_Formin,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FHOD3	HGNC	ENSG00000134775	tier1	-	-	87	0	0.00	43	4	8.51
FMN2	0	genome.wustl.edu	37	1	240255442	240255442	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	1	240255442	240255442	C	A	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	missense	c.33	p.S11R	0.999	NULL	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816	tier1	-	-	53	0	0.00	15	6	28.57
GGT5	0	genome.wustl.edu	37	22	24622685	24622685	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	22	24622685	24622685	C	T	SNP	GGT5	ENST00000398292	human	ensembl	74_37	-1	known	missense	c.952	p.V318M	0.766	pfam_GGT_peptidase	pfam_GGT_peptidase,prints_GGT_peptidase	-	no_errors	GGT5	HGNC	ENSG00000099998	tier1	-	-	79	0	0.00	28	19	40.43
GOLGA8H	0	genome.wustl.edu	37	15	30906600	30906600	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	15	30906600	30906600	G	C	SNP	GOLGA8H	ENST00000566740	human	ensembl	74_37	+1	novel	missense	c.1735	p.V579L	0.912	NULL	NULL	-	no_errors	GOLGA8H	HGNC	ENSG00000261794	tier1	-	-	54	0	0.00	17	9	34.62
GVINP1	0	genome.wustl.edu	37	11	6740462	6740462	+	RNA	SNP	G	G	C			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	11	6740462	6740462	G	C	SNP	GVINP1	ENST00000526769	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	GVINP1	HGNC	ENSG00000254838				81	0	0.00	43	3	6.52
HMCN1	0	genome.wustl.edu	37	1	185950197	185950197	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	1	185950197	185950197	C	A	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.2654	p.T885N	1.000	smart_Ig_sub	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	33	0	0.00	29	10	25.64
HSPA1L	0	genome.wustl.edu	37	6	31778675	31778675	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	6	31778675	31778675	G	A	SNP	HSPA1L	ENST00000375654	human	ensembl	74_37	-1	known	missense	c.1075	p.R359C	0.998	pfam_Hsp_70_fam,pfam_MreB_Mrl	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA1L	HGNC	ENSG00000204390	tier1	-	-	104	0	0.00	47	13	21.67
IQSEC3	0	genome.wustl.edu	37	12	247762	247762	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	12	247762	247762	G	-	DEL	IQSEC3	ENST00000326261	human	ensembl	74_37	+1	known	frame_shift_del	c.1233	p.K411fs	1.000	NULL	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Sec7_dom	-	no_errors	IQSEC3	HGNC	ENSG00000120645	tier1			37	0	0.00	9	2	18.18
KRBA1	0	genome.wustl.edu	37	7	149420836	149420836	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	7	149420836	149420836	G	A	SNP	KRBA1	ENST00000255992	human	ensembl	74_37	+1	known	missense	c.784	p.A262T	0.013	NULL	NULL	-	no_errors	KRBA1	HGNC	ENSG00000133619	tier1	-	-	230	0	0.00	136	45	24.86
KRT16P2	0	genome.wustl.edu	37	17	16735593	16735593	+	RNA	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	17	16735593	16735593	G	T	SNP	KRT16P2	ENST00000579062	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.432	-	-	-	no_errors	KRT16P2	HGNC	ENSG00000227300	tier1	-	-	152	0	0.00	82	21	20.39
LEMD3	0	genome.wustl.edu	37	12	65634751	65634751	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	12	65634751	65634751	T	C	SNP	LEMD3	ENST00000308330	human	ensembl	74_37	+1	known	missense	c.2189	p.V730A	1.000	pfam_Inner-Nucl-membr_MAN1	pfam_Inner-Nucl-membr_MAN1,pfam_LEM_dom,superfamily_LEM/LEM-like_dom,smart_LEM_dom,pfscan_LEM_dom	-	no_errors	LEMD3	HGNC	ENSG00000174106				72	0	0.00	228	19	7.69
LMF1	0	genome.wustl.edu	37	16	920852	920852	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	16	920852	920852	G	T	SNP	LMF1	ENST00000262301	human	ensembl	74_37	-1	known	nonsense	c.1109	p.S370*	0.015	pfam_LMF	pfam_LMF	-	no_errors	LMF1	HGNC	ENSG00000103227				62	0	0.00	38	2	5.00
LOC100653515	0	genome.wustl.edu	37	17	76887813	76887813	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	17	76887813	76887813	G	T	SNP	LOC100653515	ENST00000322630	human	ensembl	74_37	-1	putative	missense	c.773	p.A258D	0.000	NULL	NULL	-	no_errors	DDC8	Uniprot_gn	ENSG00000178404	tier1	-	-	44	0	0.00	30	4	11.76
LRIT1	0	genome.wustl.edu	37	10	85992508	85992508	+	Silent	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	10	85992508	85992508	C	T	SNP	LRIT1	ENST00000372105	human	ensembl	74_37	-1	known	silent	c.1047	p.P349	0.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRIT1	HGNC	ENSG00000148602	tier1	-	-	32	0	0.00	12	3	20.00
MDGA1	0	genome.wustl.edu	37	6	37623625	37623625	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	6	37623625	37623625	G	A	SNP	MDGA1	ENST00000297153	human	ensembl	74_37	-1	known	nonsense	c.430	p.R144*	0.953	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA1	HGNC	ENSG00000112139	tier1	-	-	41	0	0.00	29	5	14.71
MGST3	0	genome.wustl.edu	37	1	165619133	165619133	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	1	165619133	165619133	G	T	SNP	MGST3	ENST00000367886	human	ensembl	74_37	+1	known	missense	c.91	p.A31S	1.000	pfam_Membr-assoc_MAPEG	pfam_Membr-assoc_MAPEG	-	no_errors	MGST3	HGNC	ENSG00000143198	tier1	-	-	61	0	0.00	26	4	13.33
MPI	0	genome.wustl.edu	37	15	75190056	75190056	+	Silent	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	15	75190056	75190056	C	T	SNP	MPI	ENST00000352410	human	ensembl	74_37	+1	known	silent	c.1257	p.A419	1.000	superfamily_RmlC_Cupin,pirsf_Mannose-6-P_Isomerase	pfam_Man6P_Isoase-1,superfamily_RmlC_Cupin,pirsf_Mannose-6-P_Isomerase,prints_Mannose-6-P_Isomerase,tigrfam_Man6P_Isoase-1	-	no_errors	MPI	HGNC	ENSG00000178802	tier1	-	-	83	0	0.00	36	6	14.29
MS4A15	0	genome.wustl.edu	37	11	60543107	60543107	+	Silent	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	11	60543107	60543107	C	T	SNP	MS4A15	ENST00000405633	human	ensembl	74_37	+1	known	silent	c.642	p.S214	0.996	NULL	pfam_CD20-like	-	no_errors	MS4A15	HGNC	ENSG00000166961	tier1	-	-	64	0	0.00	27	14	34.15
MSH4	0	genome.wustl.edu	37	1	76280729	76280729	+	Silent	SNP	A	A	G			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	1	76280729	76280729	A	G	SNP	MSH4	ENST00000263187	human	ensembl	74_37	+1	known	silent	c.723	p.Q241	1.000	pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mmatch_repair_MutS_con_dom	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH4	HGNC	ENSG00000057468	tier1	-	-	62	0	0.00	26	6	18.75
NBPF1	0	genome.wustl.edu	37	1	16921146	16921146	+	RNA	SNP	T	T	C			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	1	16921146	16921146	T	C	SNP	NBPF1	ENST00000420513	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	NBPF1	HGNC	ENSG00000219481	tier1	rs1759165	-	11	0	0.00	3	4	57.14
NBPF22P	0	genome.wustl.edu	37	5	85589080	85589080	+	RNA	SNP	C	C	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	5	85589080	85589080	C	A	SNP	NBPF22P	ENST00000590707	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	NBPF22P	HGNC	ENSG00000205449				98	0	0.00	62	4	6.06
NELL1	0	genome.wustl.edu	37	11	20968944	20968944	+	Silent	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	11	20968944	20968944	C	T	SNP	NELL1	ENST00000357134	human	ensembl	74_37	+1	known	silent	c.1134	p.H378	0.953	smart_VWF_C	pfam_EGF-like_Ca-bd_dom,pfam_VWF_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_VWC_out,smart_VWF_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	NELL1	HGNC	ENSG00000165973	tier1	-	-	43	0	0.00	16	3	15.79
NRG3	0	genome.wustl.edu	37	10	84745037	84745037	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	10	84745037	84745037	G	T	SNP	NRG3	ENST00000404547	human	ensembl	74_37	+1	known	missense	c.1839	p.M613I	1.000	NULL	pfscan_EG-like_dom	-	no_errors	NRG3	HGNC	ENSG00000185737	tier1	-	-	51	0	0.00	34	5	12.82
PCNXL4	0	genome.wustl.edu	37	14	60591065	60591065	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	14	60591065	60591065	A	T	SNP	PCNXL4	ENST00000404681	human	ensembl	74_37	+1	known	missense	c.2176	p.T726S	1.000	NULL	pfam_Pecanex	-	no_errors	PCNXL4	HGNC	ENSG00000126773	tier1	-	-	71	0	0.00	27	22	44.90
PDE11A	0	genome.wustl.edu	37	2	178762828	178762828	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	2	178762828	178762828	C	T	SNP	PDE11A	ENST00000286063	human	ensembl	74_37	-1	known	missense	c.1259	p.C420Y	1.000	pfam_GAF,smart_GAF	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE11A	HGNC	ENSG00000128655	tier1	-	-	85	0	0.00	49	21	30.00
PDGFA	0	genome.wustl.edu	37	7	550549	550549	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	7	550549	550549	A	G	SNP	PDGFA	ENST00000354513	human	ensembl	74_37	-1	known	missense	c.350	p.F117S	1.000	pfam_PDGF/VEGF_dom,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	pfam_PDGF/VEGF_dom,pfam_PDGF_N,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	-	no_errors	PDGFA	HGNC	ENSG00000197461	tier1	-	-	68	0	0.00	83	18	17.82
PLCH1	0	genome.wustl.edu	37	3	155212209	155212209	+	Silent	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	3	155212209	155212209	G	T	SNP	PLCH1	ENST00000340059	human	ensembl	74_37	-1	known	silent	c.1956	p.L652	0.984	pfam_PLipase_C_Pinositol-sp_Y,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_Pinositol-sp_Y,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCH1	HGNC	ENSG00000114805				58	0	0.00	37	2	5.13
PRDM9	0	genome.wustl.edu	37	5	23527050	23527050	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	5	23527050	23527050	G	T	SNP	PRDM9	ENST00000296682	human	ensembl	74_37	+1	known	missense	c.1853	p.S618I	0.042	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_SSXRD_motif,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	PRDM9	HGNC	ENSG00000164256	tier1	-	-	72	0	0.00	39	5	11.36
PRPS2	0	genome.wustl.edu	37	X	12837707	12837707	+	Silent	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	X	12837707	12837707	G	T	SNP	PRPS2	ENST00000398491	human	ensembl	74_37	+1	known	silent	c.621	p.R207	1.000	pfam_PRibTrfase_dom,tigrfam_Rib-P_diPkinase	pfam_PRibTrfase_dom,tigrfam_Rib-P_diPkinase	-	no_errors	PRPS2	HGNC	ENSG00000101911	tier1	-	-	76	0	0.00	54	4	6.90
PTPRZ1	0	genome.wustl.edu	37	7	121652125	121652125	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	7	121652125	121652125	G	T	SNP	PTPRZ1	ENST00000393386	human	ensembl	74_37	+1	known	missense	c.3025	p.D1009Y	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRZ1	HGNC	ENSG00000106278				36	0	0.00	25	5	16.67
PYHIN1	0	genome.wustl.edu	37	1	158912089	158912089	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	1	158912089	158912089	C	A	SNP	PYHIN1	ENST00000368140	human	ensembl	74_37	+1	known	missense	c.902	p.P301Q	0.004	pfam_HIN200/IF120x,pfscan_HIN200/IF120x	pfam_HIN200/IF120x,pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN,pfscan_HIN200/IF120x	-	no_errors	PYHIN1	HGNC	ENSG00000163564				32	0	0.00	20	3	13.04
RFX6	0	genome.wustl.edu	37	6	117243304	117243304	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	6	117243304	117243304	G	T	SNP	RFX6	ENST00000332958	human	ensembl	74_37	+1	known	missense	c.1427	p.R476I	1.000	NULL	pfam_DNA-bd_RFX	-	no_errors	RFX6	HGNC	ENSG00000185002				46	0	0.00	30	2	6.25
RFX7	0	genome.wustl.edu	37	15	56390553	56390553	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	15	56390553	56390553	G	A	SNP	RFX7	ENST00000423270	human	ensembl	74_37	-1	known	missense	c.833	p.P278L	1.000	NULL	pfam_DNA-bd_RFX	-	no_errors	RFX7	HGNC	ENSG00000181827	tier1	-	-	40	0	0.00	6	13	68.42
RTEL1	0	genome.wustl.edu	37	20	62321468	62321468	+	Silent	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	20	62321468	62321468	C	T	SNP	RTEL1	ENST00000318100	human	ensembl	74_37	+1	known	silent	c.2170	p.L724	1.000	tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	RTEL1	HGNC	ENSG00000258366				37	0	0.00	17	2	10.53
SIGMAR1	0	genome.wustl.edu	37	9	34637400	34637400	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	9	34637400	34637400	C	-	DEL	SIGMAR1	ENST00000277010	human	ensembl	74_37	-1	known	frame_shift_del	c.169	p.A57fs	1.000	pfam_ERG2_sigma1_rcpt-like	pfam_ERG2_sigma1_rcpt-like	-	no_errors	SIGMAR1	HGNC	ENSG00000147955	tier1			19	0	0.00	3	2	40.00
SIRT2	0	genome.wustl.edu	37	19	39390226	39390226	+	RNA	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	19	39390226	39390226	C	T	SNP	SIRT2	ENST00000481381	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.891	-	-	-	no_errors	SIRT2	HGNC	ENSG00000068903	tier1	-	-	91	0	0.00	48	5	9.43
SLC22A2	0	genome.wustl.edu	37	6	160679544	160679544	+	Silent	SNP	G	G	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	6	160679544	160679544	G	A	SNP	SLC22A2	ENST00000366953	human	ensembl	74_37	-1	known	silent	c.246	p.G82	0.055	pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A2	HGNC	ENSG00000112499	tier1	-	-	139	0	0.00	38	18	32.14
SMEK1	0	genome.wustl.edu	37	14	91932626	91932626	+	RNA	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	14	91932626	91932626	C	T	SNP	SMEK1	ENST00000555718	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SMEK1	HGNC	ENSG00000100796	tier1	-	-	154	0	0.00	56	31	35.63
SOAT1	0	genome.wustl.edu	37	1	179308616	179308616	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	1	179308616	179308616	T	C	SNP	SOAT1	ENST00000367619	human	ensembl	74_37	+1	known	missense	c.433	p.F145L	1.000	NULL	pfam_MBOAT_fam	-	no_errors	SOAT1	HGNC	ENSG00000057252	tier1	-	-	61	0	0.00	21	4	16.00
SPATA6	0	genome.wustl.edu	37	1	48850999	48850999	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	1	48850999	48850999	G	T	SNP	SPATA6	ENST00000371847	human	ensembl	74_37	-1	known	nonsense	c.891	p.C297*	0.701	NULL	NULL	-	no_errors	SPATA6	HGNC	ENSG00000132122	tier1	-	-	75	0	0.00	50	4	7.27
SRPK2	0	genome.wustl.edu	37	7	104787088	104787088	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	7	104787088	104787088	A	C	SNP	SRPK2	ENST00000393651	human	ensembl	74_37	-1	known	missense	c.639	p.D213E	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	SRPK2	HGNC	ENSG00000135250	tier1	-	-	45	0	0.00	37	11	22.92
SSTR1	0	genome.wustl.edu	37	14	38678867	38678867	+	Silent	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	14	38678867	38678867	G	T	SNP	SSTR1	ENST00000267377	human	ensembl	74_37	+1	known	silent	c.273	p.T91	0.998	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Opioid_rcpt,prints_NPY_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt_1,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Opioid_rcpt,prints_NPY_rcpt,prints_Neuropept_B/W_rcpt	-	no_errors	SSTR1	HGNC	ENSG00000139874				72	0	0.00	32	2	5.88
SYT10	0	genome.wustl.edu	37	12	33529826	33529826	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	12	33529826	33529826	C	T	SNP	SYT10	ENST00000228567	human	ensembl	74_37	-1	known	missense	c.1511	p.R504Q	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT10	HGNC	ENSG00000110975	tier1	-	-	35	0	0.00	13	5	27.78
SYTL4	0	genome.wustl.edu	37	X	99930886	99930887	+	RNA	INS	-	-	AC			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	X	99930886	99930887	-	AC	INS	SYTL4	ENST00000491602	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.041:0.081	-	-	-	no_errors	SYTL4	HGNC	ENSG00000102362	tier1			18	0	0.00	2	5	71.43
TADA2B	0	genome.wustl.edu	37	4	7056555	7056555	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	4	7056555	7056555	C	T	SNP	TADA2B	ENST00000310074	human	ensembl	74_37	+1	known	missense	c.1037	p.P346L	0.793	superfamily_Homeodomain-like,pirsf_Transcriptional_adaptor_2	pfam_SANT/Myb,pfam_Znf_ZZ,superfamily_Homeodomain-like,smart_Znf_ZZ,smart_SANT/Myb,pirsf_Transcriptional_adaptor_2,pfscan_Znf_ZZ,pfscan_Myb-like_dom	-	no_errors	TADA2B	HGNC	ENSG00000173011	tier1	-	-	27	0	0.00	7	4	36.36
TG	0	genome.wustl.edu	37	8	133899255	133899255	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	8	133899255	133899255	G	T	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	missense	c.1638	p.K546N	0.010	pirsf_Thyroglobulin	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832				48	0	0.00	27	2	6.90
TMEM246	0	genome.wustl.edu	37	9	104238319	104238319	+	Silent	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	9	104238319	104238319	G	T	SNP	TMEM246	ENST00000374847	human	ensembl	74_37	-1	known	silent	c.1056	p.S352	0.962	NULL	NULL	-	no_errors	TMEM246	HGNC	ENSG00000165152				75	0	0.00	55	3	5.17
TP53I11	0	genome.wustl.edu	37	11	44956472	44956472	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	11	44956472	44956472	T	C	SNP	TP53I11	ENST00000308212	human	ensembl	74_37	-1	known	missense	c.533	p.Y178C	1.000	NULL	NULL	-	no_errors	TP53I11	HGNC	ENSG00000175274	tier1	-	-	61	0	0.00	20	4	16.67
TRPC3	0	genome.wustl.edu	37	4	122854046	122854046	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	4	122854046	122854046	C	T	SNP	TRPC3	ENST00000379645	human	ensembl	74_37	-1	known	missense	c.367	p.G123S	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPC3_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC3	HGNC	ENSG00000138741	tier1	-	-	77	0	0.00	39	10	20.41
TTC39C	0	genome.wustl.edu	37	18	21708871	21708871	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	18	21708871	21708871	C	T	SNP	TTC39C	ENST00000317571	human	ensembl	74_37	+1	known	missense	c.1442	p.S481L	0.999	pfam_OMP_IML2_mit/TPR_39	pfam_OMP_IML2_mit/TPR_39,pfam_Cohesin_loading_factor	-	no_errors	TTC39C	HGNC	ENSG00000168234	tier1	-	-	110	0	0.00	70	26	27.08
TTN	0	genome.wustl.edu	37	2	179600781	179600781	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	2	179600781	179600781	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.10660	p.L3554F	0.989	pfam_Ig_I-set,superfamily_RNaseH-like_dom,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	46	0	0.00	32	4	11.11
TYR	0	genome.wustl.edu	37	11	88911367	88911367	+	Silent	SNP	C	C	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	11	88911367	88911367	C	T	SNP	TYR	ENST00000263321	human	ensembl	74_37	+1	known	silent	c.246	p.S82	0.004	superfamily_Unchr_di-copper_centre	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	TYR	HGNC	ENSG00000077498	tier1	rs139926589	-	28	0	0.00	18	5	21.74
USP51	0	genome.wustl.edu	37	X	55515360	55515360	+	Silent	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	X	55515360	55515360	G	T	SNP	USP51	ENST00000500968	human	ensembl	74_37	-1	known	silent	c.13	p.R5	0.909	NULL	pfam_Peptidase_C19/C67,pfam_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP51	HGNC	ENSG00000247746				45	0	0.00	14	3	17.65
VAV1	0	genome.wustl.edu	37	19	6826687	6826687	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	19	6826687	6826687	G	T	SNP	VAV1	ENST00000602142	human	ensembl	74_37	+1	known	missense	c.892	p.A298S	0.991	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH3_domain,prints_SH2,prints_SM22_calponin	-	no_errors	VAV1	HGNC	ENSG00000141968	tier1	-	-	59	0	0.00	32	4	11.11
VWDE	0	genome.wustl.edu	37	7	12414816	12414816	+	Silent	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	7	12414816	12414816	G	T	SNP	VWDE	ENST00000452576	human	ensembl	74_37	-1	known	silent	c.1062	p.S354	0.990	NULL	pfam_VWF_type-D,superfamily_Cadherin-like,smart_VWF_type-D,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	VWDE	HGNC	ENSG00000146530	tier1	-	-	42	0	0.00	28	12	30.00
YWHAH	0	genome.wustl.edu	37	22	32353392	32353392	+	RNA	DEL	T	T	-			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	22	32353392	32353392	T	-	DEL	YWHAH	ENST00000471374	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	YWHAH	HGNC	ENSG00000128245	tier1			41	0	0.00	25	5	16.67
ZNF157	0	genome.wustl.edu	37	X	47269756	47269756	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	X	47269756	47269756	C	A	SNP	ZNF157	ENST00000377073	human	ensembl	74_37	+1	known	missense	c.154	p.H52N	1.000	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF157	HGNC	ENSG00000147117	tier1	-	-	198	0	0.00	245	22	8.24
ZNF544	0	genome.wustl.edu	37	19	58772365	58772365	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	19	58772365	58772365	G	T	SNP	ZNF544	ENST00000269829	human	ensembl	74_37	+1	known	missense	c.393	p.Q131H	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF544	HGNC	ENSG00000198131	tier1	-	-	47	0	0.00	55	4	6.78
ZNF81	0	genome.wustl.edu	37	X	47775628	47775628	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A43M-01A-11D-A247-09	TCGA-L5-A43M-11A-11D-A247-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a5c13439-c890-4471-a0c8-f2045cad7ca1	8fe2df9d-573d-4432-b47e-a608df7c0f4f	X	47775628	47775628	G	T	SNP	ZNF81	ENST00000338637	human	ensembl	74_37	+1	known	missense	c.1583	p.C528F	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF81	HGNC	ENSG00000197779	tier1	-	-	71	0	0.00	60	22	26.83
