Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AACS	0	genome.wustl.edu	37	12	125613986	125613986	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	125613986	125613986	C	T	SNP	AACS	ENST00000316519	human	ensembl	74_37	+1	known	missense	c.1529	p.A510V	1.000	pfam_AMP-dep_Synth/Lig,tigrfam_Acac_CoA_synth	pfam_AMP-dep_Synth/Lig,tigrfam_Acac_CoA_synth	-	no_errors	AACS	HGNC	ENSG00000081760	tier1	-	-	212	0	0.00	115	41	26.28
AACS	0	genome.wustl.edu	37	12	125626670	125626670	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	125626670	125626670	C	T	SNP	AACS	ENST00000261686	human	ensembl	74_37	+1	known	missense	c.1711	p.R571C	0.000	NULL	pfam_AMP-dep_Synth/Lig,tigrfam_Acac_CoA_synth	-	no_errors	AACS	HGNC	ENSG00000081760	tier1	rs148449574	-	63	0	0.00	51	26	33.77
AAK1	0	genome.wustl.edu	37	2	69704020	69704020	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	69704020	69704020	T	-	DEL	AAK1	ENST00000409085	human	ensembl	74_37	-1	known	frame_shift_del	c.2783	p.N928fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	AAK1	HGNC	ENSG00000115977	tier1			45	0	0.00	26	14	35.00
AASDH	0	genome.wustl.edu	37	4	57209044	57209044	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	57209044	57209044	C	T	SNP	AASDH	ENST00000205214	human	ensembl	74_37	-1	known	missense	c.2864	p.C955Y	0.999	superfamily_Quinonprotein_ADH-like_supfam	pfam_AMP-dep_Synth/Lig,pfam_Acyl_carrier_prot-like,superfamily_Quinonprotein_ADH-like_supfam,superfamily_Acyl_carrier_prot-like,smart_PQQ_beta_propeller_repeat,pfscan_Acyl_carrier_prot-like	-	no_errors	AASDH	HGNC	ENSG00000157426	tier1	-	-	21	0	0.00	16	14	46.67
ABCA12	0	genome.wustl.edu	37	2	215855716	215855716	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	215855716	215855716	A	T	SNP	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	missense	c.3334	p.F1112I	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452	tier1	-	-	15	0	0.00	7	9	56.25
ABCA12	0	genome.wustl.edu	37	2	215940284	215940285	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	215940284	215940285	AA	-	DEL	ABCA12	ENST00000412081	human	ensembl	74_37	-1	novel	frame_shift_del	c.220_219	p.S74fs	0.082:0.069	NULL	NULL	-	no_errors	ABCA12	HGNC	ENSG00000144452	tier1			32	0	0.00	19	9	32.14
ABCA13	0	genome.wustl.edu	37	7	48312959	48312959	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	48312959	48312959	G	A	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	silent	c.3696	p.R1232	0.030	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	tier1	-	-	24	0	0.00	13	10	43.48
ABCA2	0	genome.wustl.edu	37	9	139908434	139908434	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	139908434	139908434	C	T	SNP	ABCA2	ENST00000265662	human	ensembl	74_37	-1	known	missense	c.4297	p.G1433R	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA2	HGNC	ENSG00000107331	tier1	-	-	11	0	0.00	2	6	75.00
ABCA2	0	genome.wustl.edu	37	9	139909958	139909958	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	139909958	139909958	C	T	SNP	ABCA2	ENST00000265662	human	ensembl	74_37	-1	known	missense	c.3605	p.C1202Y	1.000	superfamily_P-loop_NTPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA2	HGNC	ENSG00000107331	tier1	-	-	129	0	0.00	53	36	40.45
ABCA5	0	genome.wustl.edu	37	17	67260954	67260954	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	67260954	67260954	G	A	SNP	ABCA5	ENST00000392677	human	ensembl	74_37	-1	known	silent	c.3240	p.I1080	0.054	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA5	HGNC	ENSG00000154265	tier1	-	-	27	0	0.00	28	15	34.88
ABCA6	0	genome.wustl.edu	37	17	67125767	67125767	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	67125767	67125767	A	-	DEL	ABCA6	ENST00000284425	human	ensembl	74_37	-1	known	frame_shift_del	c.917	p.L306fs	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA6	HGNC	ENSG00000154262	tier1			30	0	0.00	17	13	43.33
ABCA8	0	genome.wustl.edu	37	17	66872639	66872639	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	66872639	66872639	C	T	SNP	ABCA8	ENST00000430352	human	ensembl	74_37	-1	known	silent	c.4332	p.P1444	0.055	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA8	HGNC	ENSG00000141338	tier1	rs143428358	-	63	0	0.00	41	4	8.89
ABCB10	0	genome.wustl.edu	37	1	229654633	229654633	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	229654633	229654633	A	-	DEL	ABCB10	ENST00000498158	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.079	-	-	-	no_errors	ABCB10	HGNC	ENSG00000135776	tier1			34	0	0.00	44	13	22.81
ABCB6	0	genome.wustl.edu	37	2	220081123	220081123	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	220081123	220081123	G	T	SNP	ABCB6	ENST00000265316	human	ensembl	74_37	-1	known	missense	c.933	p.F311L	0.996	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB6	HGNC	ENSG00000115657	tier1	-	-	59	0	0.00	58	4	6.45
ABCC10	0	genome.wustl.edu	37	6	43395732	43395732	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	43395732	43395732	G	T	SNP	ABCC10	ENST00000372530	human	ensembl	74_37	+1	known	missense	c.16	p.A6S	0.996	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC10	HGNC	ENSG00000124574	tier1	-	-	87	0	0.00	50	4	7.41
ABCC11	0	genome.wustl.edu	37	16	48264408	48264408	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	48264408	48264408	G	T	SNP	ABCC11	ENST00000356608	human	ensembl	74_37	-1	known	missense	c.176	p.P59Q	0.000	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC11	HGNC	ENSG00000121270	tier1	-	-	45	0	0.00	56	4	6.67
ABCC13	0	genome.wustl.edu	37	21	15663705	15663707	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	15663705	15663707	AAA	-	DEL	ABCC13	ENST00000471902	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001:0.000:0.000	-	-	-	no_errors	ABCC13	HGNC	ENSG00000243064	tier1			35	0	0.00	35	7	16.67
ABCC13	0	genome.wustl.edu	37	21	15663705	15663708	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	15663705	15663708	AAAA	-	DEL	ABCC13	ENST00000471902	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001:0.000:0.000:0.000	-	-	-	no_errors	ABCC13	HGNC	ENSG00000243064	tier1			35	0	0.00	37	5	11.90
ABCC8	0	genome.wustl.edu	37	11	17414565	17414565	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	17414565	17414565	G	A	SNP	ABCC8	ENST00000302539	human	ensembl	74_37	-1	known	silent	c.4722	p.F1574	0.980	pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC8	HGNC	ENSG00000006071	tier1	-	-	65	0	0.00	30	16	34.78
ABCE1	0	genome.wustl.edu	37	4	146033434	146033434	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	146033434	146033434	C	T	SNP	ABCE1	ENST00000296577	human	ensembl	74_37	+1	known	missense	c.754	p.R252C	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,pfam_RNaseL-inhib_metal-bd_dom,pfam_4Fe4S-bd_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,prints_ABC_E	-	no_errors	ABCE1	HGNC	ENSG00000164163	tier1	-	-	70	0	0.00	60	29	32.58
ABCG1	0	genome.wustl.edu	37	21	43691299	43691299	+	Splice_Site	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	43691299	43691299	T	C	SNP	ABCG1	ENST00000398437	human	ensembl	74_37	+1	known	splice_site	c.842+2	e4+2	1.000	-	-	-	no_errors	ABCG1	HGNC	ENSG00000160179	tier1	-	-	40	0	0.00	24	20	45.45
ABHD10	0	genome.wustl.edu	37	3	111705797	111705797	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	111705797	111705797	C	T	SNP	ABHD10	ENST00000273359	human	ensembl	74_37	+1	known	missense	c.475	p.L159F	1.000	pfam_AB_hydrolase_1,pfam_Peptidase_S9	pfam_AB_hydrolase_1,pfam_Peptidase_S9	-	no_errors	ABHD10	HGNC	ENSG00000144827	tier1	-	-	53	0	0.00	30	18	37.50
ABHD17B	0	genome.wustl.edu	37	9	74481778	74481778	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	74481778	74481778	G	T	SNP	ABHD17B	ENST00000377041	human	ensembl	74_37	-1	known	missense	c.792	p.H264Q	1.000	pfam_Peptidase_S9,pfam_Dienelactn_hydro	pfam_Peptidase_S9,pfam_Dienelactn_hydro	-	no_errors	ABHD17B	HGNC	ENSG00000107362	tier1	-	-	62	0	0.00	54	5	8.47
ABLIM1	0	genome.wustl.edu	37	10	116205099	116205099	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	116205099	116205099	C	T	SNP	ABLIM1	ENST00000277895	human	ensembl	74_37	-1	known	missense	c.1799	p.R600Q	1.000	NULL	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM1	HGNC	ENSG00000099204	tier1	rs148624929	-	95	0	0.00	36	24	40.00
ABLIM3	0	genome.wustl.edu	37	5	148630032	148630032	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	148630032	148630032	C	A	SNP	ABLIM3	ENST00000309868	human	ensembl	74_37	+1	known	silent	c.1752	p.A584	1.000	NULL	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM3	HGNC	ENSG00000173210	tier1	-	-	104	0	0.00	47	35	42.68
ABR	0	genome.wustl.edu	37	17	916344	916344	+	Splice_Site	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	916344	916344	C	-	DEL	ABR	ENST00000302538	human	ensembl	74_37	-1	known	splice_site_del	c.1851+1	e17+1	1.000	-	-	-	no_errors	ABR	HGNC	ENSG00000159842	tier1			99	0	0.00	48	24	33.33
ACACA	0	genome.wustl.edu	37	17	35557399	35557399	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	35557399	35557399	G	T	SNP	ACACA	ENST00000353139	human	ensembl	74_37	-1	known	silent	c.4084	p.R1362	0.985	pfam_AcCoA_COase_cen	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_carboxylate-amine,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACA	HGNC	ENSG00000132142				13	0	0.00	30	3	9.09
ACLY	0	genome.wustl.edu	37	17	40066524	40066524	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	40066524	40066524	G	T	SNP	ACLY	ENST00000352035	human	ensembl	74_37	-1	known	missense	c.296	p.T99K	0.833	pfam_ATP-grasp_succ-CoA_synth-type,pirsf_ATP-citrate_synthase	pfam_Citrate_synthase-like,pfam_CoA_ligase,pfam_CoA-bd,pfam_ATP-grasp_succ-CoA_synth-type,superfamily_Citrate_synthase-like_core,superfamily_Succinyl-CoA_synth-like,smart_CoA-bd,pirsf_ATP-citrate_synthase	-	no_errors	ACLY	HGNC	ENSG00000131473	tier1	-	-	53	0	0.00	39	5	11.36
ACSL5	0	genome.wustl.edu	37	10	114181709	114181709	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	114181709	114181709	C	T	SNP	ACSL5	ENST00000356116	human	ensembl	74_37	+1	known	silent	c.1560	p.H520	0.893	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL5	HGNC	ENSG00000197142	tier1	-	-	51	0	0.00	28	14	33.33
ACTB	0	genome.wustl.edu	37	7	5567138	5567138	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	5567138	5567138	A	-	DEL	ACTB	ENST00000464611	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ACTB	HGNC	ENSG00000075624	tier1			56	0	0.00	38	21	35.59
ACTR6	0	genome.wustl.edu	37	12	100598718	100598718	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	100598718	100598718	G	A	SNP	ACTR6	ENST00000188312	human	ensembl	74_37	+1	known	silent	c.69	p.S23	0.998	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related	-	no_errors	ACTR6	HGNC	ENSG00000075089	tier1	-	-	77	0	0.00	43	26	37.68
ACVR1B	0	genome.wustl.edu	37	12	52374794	52374794	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	52374794	52374794	G	A	SNP	ACVR1B	ENST00000257963	human	ensembl	74_37	+1	known	missense	c.622	p.V208I	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ACVR1B	HGNC	ENSG00000135503	tier1	-	-	71	0	0.00	38	19	33.33
ACVR1C	0	genome.wustl.edu	37	2	158412733	158412733	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	158412733	158412733	C	T	SNP	ACVR1C	ENST00000243349	human	ensembl	74_37	-1	known	missense	c.416	p.R139Q	0.901	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ACVR1C	HGNC	ENSG00000123612	tier1	rs201171210	-	52	0	0.00	34	32	48.48
ACVR2A	0	genome.wustl.edu	37	2	148683686	148683686	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	148683686	148683686	A	-	DEL	ACVR2A	ENST00000241416	human	ensembl	74_37	+1	known	frame_shift_del	c.1303	p.K437fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVR2A	HGNC	ENSG00000121989	tier1			79	0	0.00	30	59	66.29
ACY1	0	genome.wustl.edu	37	3	52021444	52021444	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	52021444	52021444	G	-	DEL	ACY1	ENST00000458031	human	ensembl	74_37	+1	known	frame_shift_del	c.1097	p.R366fs	0.999	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer,tigrfam_N-acyl_aa_amidohydrolase	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer,tigrfam_N-acyl_aa_amidohydrolase	-	no_errors	ACY1	HGNC	ENSG00000243989	tier1			47	0	0.00	14	15	51.72
ADAD1	0	genome.wustl.edu	37	4	123333870	123333870	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	123333870	123333870	A	G	SNP	ADAD1	ENST00000296513	human	ensembl	74_37	+1	known	silent	c.1155	p.S385	0.965	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADAD1	HGNC	ENSG00000164113	tier1	-	-	45	0	0.00	30	23	43.40
ADAD1	0	genome.wustl.edu	37	4	123342478	123342478	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	123342478	123342478	G	A	SNP	ADAD1	ENST00000296513	human	ensembl	74_37	+1	known	missense	c.1550	p.R517Q	1.000	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADAD1	HGNC	ENSG00000164113	tier1	-	-	49	0	0.00	30	11	26.83
ADAM15	0	genome.wustl.edu	37	1	155032745	155032745	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	155032745	155032745	T	C	SNP	ADAM15	ENST00000356955	human	ensembl	74_37	+1	known	silent	c.2133	p.L711	1.000	NULL	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,pfam_Peptidase_M12B_N,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM15	HGNC	ENSG00000143537	tier1	-	-	36	0	0.00	27	13	32.50
ADAM22	0	genome.wustl.edu	37	7	87762205	87762205	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	87762205	87762205	G	A	SNP	ADAM22	ENST00000265727	human	ensembl	74_37	+1	known	missense	c.1016	p.R339Q	1.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM22	HGNC	ENSG00000008277	tier1	-	-	171	0	0.00	88	49	35.77
ADAM23	0	genome.wustl.edu	37	2	207460861	207460861	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	207460861	207460861	C	-	DEL	ADAM23	ENST00000264377	human	ensembl	74_37	+1	known	frame_shift_del	c.2334	p.K781fs	0.000	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM23	HGNC	ENSG00000114948	tier1			74	0	0.00	19	40	67.80
ADAM32	0	genome.wustl.edu	37	8	39068767	39068767	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	39068767	39068767	A	-	DEL	ADAM32	ENST00000379907	human	ensembl	74_37	+1	known	frame_shift_del	c.1157	p.K388fs	0.517	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM32	HGNC	ENSG00000197140	tier1			40	0	0.00	35	14	28.57
ADAM32	0	genome.wustl.edu	37	8	39114763	39114763	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	39114763	39114763	T	A	SNP	ADAM32	ENST00000379907	human	ensembl	74_37	+1	known	missense	c.2063	p.L688H	0.001	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B	-	no_errors	ADAM32	HGNC	ENSG00000197140	tier1	-	-	28	0	0.00	34	15	30.61
ADAM7	0	genome.wustl.edu	37	8	24342860	24342860	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	24342860	24342860	A	T	SNP	ADAM7	ENST00000175238	human	ensembl	74_37	+1	known	missense	c.946	p.T316S	0.992	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM7	HGNC	ENSG00000069206	tier1	-	-	58	0	0.00	57	23	28.75
ADAM7	0	genome.wustl.edu	37	8	24359015	24359015	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	24359015	24359015	G	T	SNP	ADAM7	ENST00000175238	human	ensembl	74_37	+1	known	nonsense	c.2134	p.E712*	0.995	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM7	HGNC	ENSG00000069206	tier1	-	-	78	0	0.00	117	8	6.40
ADAMDEC1	0	genome.wustl.edu	37	8	24257805	24257805	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	24257805	24257805	G	T	SNP	ADAMDEC1	ENST00000256412	human	ensembl	74_37	+1	known	missense	c.1134	p.Q378H	0.145	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B	-	no_errors	ADAMDEC1	HGNC	ENSG00000134028	tier1	-	-	53	0	0.00	89	5	5.32
ADAMTS16	0	genome.wustl.edu	37	5	5140806	5140806	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	5140806	5140806	G	A	SNP	ADAMTS16	ENST00000274181	human	ensembl	74_37	+1	known	silent	c.102	p.A34	0.208	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS16	HGNC	ENSG00000145536	tier1	-	-	43	0	0.00	61	10	14.08
ADAMTS7	0	genome.wustl.edu	37	15	79058838	79058838	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	79058838	79058838	G	T	SNP	ADAMTS7	ENST00000388820	human	ensembl	74_37	-1	known	missense	c.3415	p.R1139S	0.000	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS7	HGNC	ENSG00000136378	tier1	-	-	50	0	0.00	19	11	36.67
ADAMTS8	0	genome.wustl.edu	37	11	130281317	130281317	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	130281317	130281317	G	-	DEL	ADAMTS8	ENST00000257359	human	ensembl	74_37	-1	known	frame_shift_del	c.1745	p.P582fs	0.014	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS8,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS8	HGNC	ENSG00000134917	tier1			63	0	0.00	26	12	31.58
ADAMTS9	0	genome.wustl.edu	37	3	64672616	64672616	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	64672616	64672616	G	A	SNP	ADAMTS9	ENST00000498707	human	ensembl	74_37	-1	known	silent	c.144	p.Y48	1.000	pfam_Peptidase_M12B_N	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS9	HGNC	ENSG00000163638	tier1	-	-	74	0	0.00	43	18	29.51
ADAMTSL1	0	genome.wustl.edu	37	9	18680349	18680350	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	18680349	18680350	-	G	INS	ADAMTSL1	ENST00000327883	human	ensembl	74_37	+1	known	frame_shift_ins	c.1176_1177	p.I395fs	1.000:1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,pfam_ADAM_spacer1,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_Thrombospondin_1_rpt	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031	tier1			45	0	0.00	24	15	38.46
ADAMTSL1	0	genome.wustl.edu	37	9	18776908	18776908	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	18776908	18776908	C	T	SNP	ADAMTSL1	ENST00000380548	human	ensembl	74_37	+1	novel	missense	c.2681	p.A894V	0.137	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031	tier1	-	-	55	0	0.00	32	24	42.86
ADAMTSL4	0	genome.wustl.edu	37	1	150524368	150524369	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	150524368	150524369	AA	-	DEL	ADAMTSL4	ENST00000483335	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ADAMTSL4	HGNC	ENSG00000143382	tier1			14	0	0.00	20	5	20.00
ADAMTSL4	0	genome.wustl.edu	37	1	150530505	150530506	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	150530505	150530506	-	G	INS	ADAMTSL4	ENST00000369039	human	ensembl	74_37	+1	known	frame_shift_ins	c.2331_2332	p.G780fs	1.000:1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	ADAMTSL4	HGNC	ENSG00000143382	tier1			81	0	0.00	75	13	14.77
ADARB2-AS1	0	genome.wustl.edu	37	10	1569024	1569024	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	1569024	1569024	G	A	SNP	ADARB2-AS1	ENST00000381301	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ADARB2-AS1	HGNC	ENSG00000205696	tier1	-	-	32	0	0.00	26	16	38.10
ADARB2-AS1	0	genome.wustl.edu	37	10	1577031	1577031	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	1577031	1577031	G	A	SNP	ADARB2-AS1	ENST00000381301	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	ADARB2-AS1	HGNC	ENSG00000205696	tier1	-	-	32	0	0.00	36	14	28.00
ADCK3	0	genome.wustl.edu	37	1	227171736	227171736	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	227171736	227171736	G	-	DEL	ADCK3	ENST00000478406	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ADCK3	HGNC	ENSG00000163050	tier1			42	0	0.00	41	11	21.15
ADCY2	0	genome.wustl.edu	37	5	7695879	7695879	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	7695879	7695879	A	G	SNP	ADCY2	ENST00000338316	human	ensembl	74_37	+1	known	missense	c.884	p.D295G	1.000	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY2	HGNC	ENSG00000078295	tier1	-	-	32	0	0.00	50	17	25.37
ADCY5	0	genome.wustl.edu	37	3	123010123	123010123	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	123010123	123010123	C	T	SNP	ADCY5	ENST00000462833	human	ensembl	74_37	-1	known	missense	c.3164	p.R1055H	1.000	smart_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY5	HGNC	ENSG00000173175	tier1	-	-	67	0	0.00	41	18	30.51
ADCY6	0	genome.wustl.edu	37	12	49168286	49168286	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	49168286	49168286	G	A	SNP	ADCY6	ENST00000307885	human	ensembl	74_37	-1	known	silent	c.2182	p.L728	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY6	HGNC	ENSG00000174233				30	0	0.00	35	2	5.41
ADCY9	0	genome.wustl.edu	37	16	4016810	4016810	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	4016810	4016810	C	T	SNP	ADCY9	ENST00000294016	human	ensembl	74_37	-1	known	missense	c.3028	p.G1010R	1.000	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY9	HGNC	ENSG00000162104	tier1	-	-	46	0	0.00	18	18	50.00
ADCY9	0	genome.wustl.edu	37	16	4039070	4039070	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	4039070	4039070	C	T	SNP	ADCY9	ENST00000294016	human	ensembl	74_37	-1	known	silent	c.2235	p.P745	0.443	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY9	HGNC	ENSG00000162104	tier1	-	-	45	0	0.00	16	18	52.94
ADH7	0	genome.wustl.edu	37	4	100334325	100334325	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	100334325	100334325	G	T	SNP	ADH7	ENST00000209665	human	ensembl	74_37	-1	known	silent	c.1141	p.R381	0.078	superfamily_GroES-like	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like	-	no_errors	ADH7	HGNC	ENSG00000196344				55	0	0.00	44	3	6.38
ADM	0	genome.wustl.edu	37	11	10328153	10328154	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	10328153	10328154	-	C	INS	ADM	ENST00000278175	human	ensembl	74_37	+1	known	frame_shift_ins	c.523_524	p.S178fs	0.000:0.000	prints_Adrenomedullin	pfam_Procalcitonin/adrenomedullin,prints_Adrenomedullin	-	no_errors	ADM	HGNC	ENSG00000148926	tier1			44	0	0.00	32	6	15.79
ADORA3	0	genome.wustl.edu	37	1	112045780	112045780	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	112045780	112045780	A	G	SNP	ADORA3	ENST00000369716	human	ensembl	74_37	-1	known	missense	c.197	p.M66T	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Adeno_A3_rcpt,prints_GPCR_Rhodpsn	-	no_errors	ADORA3	HGNC	ENSG00000121933	tier1	-	-	72	0	0.00	40	20	33.33
ADRB1	0	genome.wustl.edu	37	10	115804315	115804315	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	115804315	115804315	G	A	SNP	ADRB1	ENST00000369295	human	ensembl	74_37	+1	known	missense	c.424	p.V142M	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_ADRB1_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam,prints_5HT6_rcpt	-	no_errors	ADRB1	HGNC	ENSG00000043591	tier1	-	-	121	0	0.00	48	31	39.24
ADRBK1	0	genome.wustl.edu	37	11	67051342	67051342	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	67051342	67051342	C	-	DEL	ADRBK1	ENST00000308595	human	ensembl	74_37	+1	known	frame_shift_del	c.1413	p.P473fs	1.000	superfamily_Kinase-like_dom,smart_AGC-kinase_C,prints_GPCR_kinase	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	ADRBK1	HGNC	ENSG00000173020	tier1			25	0	0.00	15	7	31.82
ADTRP	0	genome.wustl.edu	37	6	11714640	11714642	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	11714640	11714642	AAA	-	DEL	ADTRP	ENST00000512139	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.001	-	-	-	no_errors	ADTRP	HGNC	ENSG00000111863	tier1			52	0	0.00	16	20	55.56
AFAP1	0	genome.wustl.edu	37	4	7870447	7870447	+	Splice_Site	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	7870447	7870447	C	A	SNP	AFAP1	ENST00000420658	human	ensembl	74_37	-1	known	splice_site	c.128-1	e2-1	1.000	-	-	-	no_errors	AFAP1	HGNC	ENSG00000196526	tier1	-	-	23	0	0.00	12	9	42.86
AFMID	0	genome.wustl.edu	37	17	76200772	76200772	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	76200772	76200772	C	T	SNP	AFMID	ENST00000327898	human	ensembl	74_37	+1	known	missense	c.344	p.T115M	0.988	pfam_AB_hydrolase_3	pfam_AB_hydrolase_3	-	no_errors	AFMID	HGNC	ENSG00000183077	tier1	-	-	98	0	0.00	49	24	32.43
AGAP3	0	genome.wustl.edu	37	7	150840884	150840884	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	150840884	150840884	C	T	SNP	AGAP3	ENST00000397238	human	ensembl	74_37	+1	known	missense	c.2590	p.R864W	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_ArfGAP,pfam_MIRO-like,pfam_Small_GTPase,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Pleckstrin_homology,smart_ArfGAP,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP,prints_Small_GTPase	-	no_errors	AGAP3	HGNC	ENSG00000133612	tier1	-	-	61	0	0.00	59	4	6.35
AGBL1	0	genome.wustl.edu	37	15	86810253	86810253	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	86810253	86810253	G	A	SNP	AGBL1	ENST00000441037	human	ensembl	74_37	+1	known	missense	c.1646	p.R549Q	0.253	superfamily_ARM-type_fold	pfam_Peptidase_M14,superfamily_ARM-type_fold	-	no_errors	AGBL1	HGNC	ENSG00000166748	tier1	-	-	41	0	0.00	26	12	31.58
AGBL4	0	genome.wustl.edu	37	1	49119009	49119009	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	49119009	49119009	C	A	SNP	AGBL4	ENST00000371839	human	ensembl	74_37	-1	known	missense	c.839	p.R280M	1.000	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,smart_Peptidase_M14	-	no_errors	AGBL4	HGNC	ENSG00000186094	tier1	-	-	77	0	0.00	58	24	29.27
AGL	0	genome.wustl.edu	37	1	100380976	100380976	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	100380976	100380976	G	T	SNP	AGL	ENST00000294724	human	ensembl	74_37	+1	known	missense	c.4193	p.W1398L	1.000	pfam_AGL/Gdb1,superfamily_6-hairpin_glycosidase-like,tigrfam_Glycogen_debranch_met	pfam_AGL/Gdb1,superfamily_6-hairpin_glycosidase-like,superfamily_Glycoside_hydrolase_SF,tigrfam_Glycogen_debranch_met	-	no_errors	AGL	HGNC	ENSG00000162688	tier1	-	-	38	0	0.00	29	4	12.12
AGO4	0	genome.wustl.edu	37	1	36316704	36316704	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	36316704	36316704	A	-	DEL	AGO4	ENST00000488778	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.117	-	-	-	no_errors	AGO4	HGNC	ENSG00000134698	tier1			16	0	0.00	23	7	23.33
AGPAT9	0	genome.wustl.edu	37	4	84519291	84519291	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	84519291	84519291	A	G	SNP	AGPAT9	ENST00000264409	human	ensembl	74_37	+1	known	missense	c.1084	p.I362V	1.000	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	AGPAT9	HGNC	ENSG00000138678	tier1	-	-	80	0	0.00	40	43	51.81
AHCTF1	0	genome.wustl.edu	37	1	247003631	247003631	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	247003631	247003631	A	-	DEL	AHCTF1	ENST00000470300	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AHCTF1	HGNC	ENSG00000153207	tier1			32	0	0.00	47	11	18.97
AIM1L	0	genome.wustl.edu	37	1	26648510	26648510	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	26648510	26648510	C	A	SNP	AIM1L	ENST00000527815	human	ensembl	74_37	-1	known	missense	c.2313	p.W771C	1.000	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Beta/gamma_crystallin,pfam_Ricin_B_lectin,superfamily_G_crystallin-rel,superfamily_Ricin_B_lectin,smart_Beta/gamma_crystallin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	AIM1L	HGNC	ENSG00000176092	tier1	-	-	61	0	0.00	36	27	42.86
AK9	0	genome.wustl.edu	37	6	109814612	109814612	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	109814612	109814612	G	C	SNP	AK9	ENST00000424296	human	ensembl	74_37	-1	known	missense	c.5696	p.T1899S	0.985	NULL	pfam_Adenylate_kin,pfam_YHS_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	AK9	HGNC	ENSG00000155085	tier1	-	-	74	0	0.00	50	38	43.18
AKAP9	0	genome.wustl.edu	37	7	91603085	91603085	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	91603085	91603085	A	-	DEL	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	frame_shift_del	c.145	p.K51fs	1.000	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914	tier1			24	0	0.00	22	5	18.52
AKAP9	0	genome.wustl.edu	37	7	91695843	91695843	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	91695843	91695843	G	T	SNP	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	nonsense	c.6349	p.E2117*	1.000	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914	tier1	-	-	21	0	0.00	19	4	17.39
AKNA	0	genome.wustl.edu	37	9	117129899	117129899	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	117129899	117129899	C	T	SNP	AKNA	ENST00000307564	human	ensembl	74_37	-1	known	missense	c.1652	p.R551Q	0.000	NULL	pfam_TF_AT-hook	-	no_errors	AKNA	HGNC	ENSG00000106948	tier1	-	-	29	0	0.00	14	9	39.13
AKR1B15	0	genome.wustl.edu	37	7	134261164	134261165	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	134261164	134261165	-	A	INS	AKR1B15	ENST00000423958	human	ensembl	74_37	+1	known	frame_shift_ins	c.723_724	p.T243fs	1.000:1.000	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1B15	HGNC	ENSG00000227471	tier1			72	0	0.00	36	29	44.62
AKR1E2	0	genome.wustl.edu	37	10	4872921	4872921	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	4872921	4872921	C	T	SNP	AKR1E2	ENST00000298375	human	ensembl	74_37	+1	known	missense	c.94	p.R32W	0.966	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1E2	HGNC	ENSG00000165568	tier1	-	-	90	0	0.00	71	40	36.04
ALDH1A3	0	genome.wustl.edu	37	15	101438350	101438350	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	101438350	101438350	G	-	DEL	ALDH1A3	ENST00000329841	human	ensembl	74_37	+1	known	frame_shift_del	c.843	p.K284fs	0.008	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1A3	HGNC	ENSG00000184254	tier1			56	0	0.00	46	21	31.34
ALDH1L1	0	genome.wustl.edu	37	3	125831672	125831672	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	125831672	125831672	G	A	SNP	ALDH1L1	ENST00000393434	human	ensembl	74_37	-1	known	nonsense	c.2134	p.R712*	0.985	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,pirsf_10_FTHF_DH	pfam_Aldehyde_DH_dom,pfam_Formyl_transf_N,pfam_Formyl_trans_C,pfam_Acyl_carrier_prot-like,superfamily_Ald_DH/histidinol_DH,superfamily_Formyl_transf_N,superfamily_Formyl_transferase_C-like,superfamily_Acyl_carrier_prot-like,pirsf_10_FTHF_DH,pfscan_Acyl_carrier_prot-like	-	no_errors	ALDH1L1	HGNC	ENSG00000144908	tier1	-	-	30	0	0.00	13	14	51.85
ALDH1L2	0	genome.wustl.edu	37	12	105464438	105464438	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	105464438	105464438	G	A	SNP	ALDH1L2	ENST00000258494	human	ensembl	74_37	-1	known	missense	c.338	p.P113L	1.000	pfam_Formyl_transf_N,superfamily_Formyl_transf_N,pirsf_10_FTHF_DH	pfam_Aldehyde_DH_dom,pfam_Formyl_transf_N,pfam_Formyl_trans_C,pfam_Acyl_carrier_prot-like,superfamily_Ald_DH/histidinol_DH,superfamily_Formyl_transf_N,superfamily_Formyl_transferase_C-like,superfamily_Acyl_carrier_prot-like,pirsf_10_FTHF_DH,pfscan_Acyl_carrier_prot-like	-	no_errors	ALDH1L2	HGNC	ENSG00000136010	tier1	-	-	60	0	0.00	38	25	39.68
ALDH4A1	0	genome.wustl.edu	37	1	19199403	19199403	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	19199403	19199403	G	A	SNP	ALDH4A1	ENST00000290597	human	ensembl	74_37	-1	known	missense	c.1628	p.S543L	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,tigrfam_1-pyrroline-5-COlate_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,tigrfam_1-pyrroline-5-COlate_DH	-	no_errors	ALDH4A1	HGNC	ENSG00000159423	tier1	rs149468487	-	28	0	0.00	12	7	36.84
ALDOA	0	genome.wustl.edu	37	16	30078291	30078291	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	30078291	30078291	C	-	DEL	ALDOA	ENST00000395248	human	ensembl	74_37	+1	novel	frame_shift_del	c.73	p.P26fs	0.001	NULL	pfam_Aldolase_I	-	no_errors	ALDOA	HGNC	ENSG00000149925	tier1			43	0	0.00	29	10	25.64
ALG1	0	genome.wustl.edu	37	16	5128869	5128869	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	5128869	5128869	G	A	SNP	ALG1	ENST00000262374	human	ensembl	74_37	+1	known	silent	c.852	p.T284	0.786	pfam_Glyco_trans_1	pfam_Glyco_trans_1	-	no_errors	ALG1	HGNC	ENSG00000033011	tier1	-	-	100	0	0.00	56	34	37.78
ALG1	0	genome.wustl.edu	37	16	5129771	5129771	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	5129771	5129771	T	C	SNP	ALG1	ENST00000262374	human	ensembl	74_37	+1	known	silent	c.924	p.D308	0.000	pfam_Glyco_trans_1	pfam_Glyco_trans_1	-	no_errors	ALG1	HGNC	ENSG00000033011				121	0	0.00	128	7	5.19
ALG13	0	genome.wustl.edu	37	X	110987996	110987996	+	Silent	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	110987996	110987996	A	T	SNP	ALG13	ENST00000394780	human	ensembl	74_37	+1	putative	silent	c.2796	p.P932	0.007	NULL	pfam_Glyco_trans_28_C,pfam_OTU,pfscan_OTU,pfscan_Tudor	-	no_errors	ALG13	HGNC	ENSG00000101901	tier1	-	-	9	0	0.00	3	4	57.14
ALG6	0	genome.wustl.edu	37	1	63836654	63836654	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	63836654	63836654	G	T	SNP	ALG6	ENST00000371108	human	ensembl	74_37	+1	known	missense	c.6	p.E2D	0.514	NULL	pfam_Glyco_trans_ALG6/ALG8	-	no_errors	ALG6	HGNC	ENSG00000088035	tier1	-	-	131	0	0.00	72	49	40.50
ALMS1	0	genome.wustl.edu	37	2	73613032	73613034	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	73613032	73613034	GGA	-	DEL	ALMS1	ENST00000264448	human	ensembl	74_37	+1	known	in_frame_del	c.36_38	p.E16in_frame_del	0.989:0.996:1.000	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127	tier1			25	0	0.00	33	7	17.50
ALMS1	0	genome.wustl.edu	37	2	73676528	73676528	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	73676528	73676528	C	T	SNP	ALMS1	ENST00000264448	human	ensembl	74_37	+1	known	silent	c.2871	p.S957	0.000	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127	tier1	-	-	13	0	0.00	12	13	52.00
ALOX12P2	0	genome.wustl.edu	37	17	6799719	6799719	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	6799719	6799719	G	T	SNP	ALOX12P2	ENST00000570890	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	ALOX12P2	HGNC	ENSG00000262943	tier1	-	-	104	0	0.00	95	5	5.00
ALPK2	0	genome.wustl.edu	37	18	56246390	56246390	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	56246390	56246390	G	A	SNP	ALPK2	ENST00000361673	human	ensembl	74_37	-1	known	missense	c.1618	p.P540S	0.058	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK2	HGNC	ENSG00000198796	tier1	-	-	33	0	0.00	15	9	37.50
ALPK2	0	genome.wustl.edu	37	18	56247704	56247704	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	56247704	56247704	C	T	SNP	ALPK2	ENST00000361673	human	ensembl	74_37	-1	known	missense	c.304	p.V102I	0.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK2	HGNC	ENSG00000198796	tier1	-	-	66	0	0.00	55	31	36.05
ALPK3	0	genome.wustl.edu	37	15	85382275	85382275	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	85382275	85382275	G	T	SNP	ALPK3	ENST00000258888	human	ensembl	74_37	+1	known	missense	c.975	p.L325F	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK3	HGNC	ENSG00000136383	tier1	-	-	88	0	0.00	64	5	7.25
ALS2CL	0	genome.wustl.edu	37	3	46722636	46722636	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	46722636	46722636	A	G	SNP	ALS2CL	ENST00000431015	human	ensembl	74_37	-1	known	missense	c.1511	p.V504A	0.000	NULL	pfam_MORN,superfamily_DH-domain,smart_MORN	-	no_errors	ALS2CL	HGNC	ENSG00000178038	tier1	-	-	79	0	0.00	62	6	8.82
ALS2CL	0	genome.wustl.edu	37	3	46729610	46729610	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	46729610	46729610	G	T	SNP	ALS2CL	ENST00000318962	human	ensembl	74_37	-1	known	missense	c.280	p.R94S	0.110	superfamily_DH-domain	pfam_MORN,pfam_VPS9,superfamily_DH-domain,smart_MORN,pfscan_VPS9	-	no_errors	ALS2CL	HGNC	ENSG00000178038				47	0	0.00	32	2	5.88
ALS2CR12	0	genome.wustl.edu	37	2	202216070	202216070	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	202216070	202216070	G	A	SNP	ALS2CR12	ENST00000286190	human	ensembl	74_37	-1	known	missense	c.58	p.R20W	0.838	NULL	superfamily_t-SNARE	-	no_errors	ALS2CR12	HGNC	ENSG00000155749	tier1	-	-	66	0	0.00	38	15	28.30
ALX4	0	genome.wustl.edu	37	11	44286624	44286624	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	44286624	44286624	G	-	DEL	ALX4	ENST00000329255	human	ensembl	74_37	-1	known	frame_shift_del	c.1016	p.P339fs	0.977	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	ALX4	HGNC	ENSG00000052850	tier1			65	0	0.00	41	21	33.87
AMACR	0	genome.wustl.edu	37	5	33989302	33989302	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	33989302	33989302	G	A	SNP	AMACR	ENST00000335606	human	ensembl	74_37	-1	known	missense	c.1045	p.H349Y	1.000	superfamily_CoA-Trfase_III_dom	pfam_CoA-Trfase_fam_III,superfamily_CoA-Trfase_III_dom	-	no_errors	AMACR	HGNC	ENSG00000242110	tier1	-	-	53	0	0.00	74	26	26.00
AMER3	0	genome.wustl.edu	37	2	131520251	131520251	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	131520251	131520251	C	-	DEL	AMER3	ENST00000321420	human	ensembl	74_37	+1	known	frame_shift_del	c.606	p.P204fs	0.000	NULL	pfam_Uncharacterised_FAM123	-	no_errors	AMER3	HGNC	ENSG00000178171	tier1			29	0	0.00	15	9	37.50
AMFR	0	genome.wustl.edu	37	16	56396935	56396935	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	56396935	56396935	C	T	SNP	AMFR	ENST00000290649	human	ensembl	74_37	-1	known	silent	c.1818	p.A606	0.000	NULL	pfam_CUE,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_CUE,pfscan_CUE,pfscan_Znf_RING	-	no_errors	AMFR	HGNC	ENSG00000159461				59	0	0.00	45	3	6.25
AMHR2	0	genome.wustl.edu	37	12	53825226	53825226	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	53825226	53825226	C	A	SNP	AMHR2	ENST00000257863	human	ensembl	74_37	+1	known	missense	c.1691	p.P564H	0.000	pirsf_Anti-muellerian_hrmn_rcpt_II	pirsf_Anti-muellerian_hrmn_rcpt_II,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	AMHR2	HGNC	ENSG00000135409	tier1	-	-	34	0	0.00	23	10	30.30
AMOTL1	0	genome.wustl.edu	37	11	94602625	94602625	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	94602625	94602625	C	T	SNP	AMOTL1	ENST00000433060	human	ensembl	74_37	+1	known	silent	c.2751	p.T917	0.000	NULL	pfam_Angiomotin_C,prints_Angiomotin	-	no_errors	AMOTL1	HGNC	ENSG00000166025	tier1	-	-	30	0	0.00	9	17	65.38
ANAPC1	0	genome.wustl.edu	37	2	112614257	112614258	+	Splice_Site	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	112614257	112614258	0	T	INS	ANAPC1	ENST00000341068	human	ensembl	74_37	-1	known	splice_site_ins	c.1450-2_1450-1	e12-1	0.994:0.992	-	-	-	no_errors	ANAPC1	HGNC	ENSG00000153107				111	0	0.00	153	11	6.71
ANAPC16	0	genome.wustl.edu	37	10	73993364	73993364	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	73993364	73993364	T	-	DEL	ANAPC16	ENST00000470481	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ANAPC16	HGNC	ENSG00000166295	tier1			40	0	0.00	16	24	60.00
ANK2	0	genome.wustl.edu	37	4	114280135	114280135	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	114280135	114280135	G	-	DEL	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	frame_shift_del	c.10361	p.G3456fs	0.005	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362	tier1			49	0	0.00	32	15	31.91
ANK2	0	genome.wustl.edu	37	4	114279580	114279580	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	114279580	114279580	G	T	SNP	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	missense	c.9806	p.R3269M	0.002	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362				22	0	0.00	13	2	13.33
ANKFY1	0	genome.wustl.edu	37	17	4071196	4071196	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	4071196	4071196	G	A	SNP	ANKFY1	ENST00000570535	human	ensembl	74_37	-1	known	silent	c.3513	p.C1171	1.000	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	pfam_Ankyrin_rpt,pfam_Znf_FYVE,pfam_BTB_POZ,superfamily_Ankyrin_rpt-contain_dom,superfamily_BTB/POZ_fold,superfamily_Znf_FYVE_PHD,smart_BTB/POZ-like,smart_Ankyrin_rpt,smart_Znf_FYVE,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like,pfscan_Znf_FYVE-rel,prints_Ankyrin_rpt	-	no_errors	ANKFY1	HGNC	ENSG00000185722	tier1	-	-	25	0	0.00	24	8	25.00
ANKHD1	0	genome.wustl.edu	37	5	139781739	139781739	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	139781739	139781739	G	A	SNP	ANKHD1	ENST00000297183	human	ensembl	74_37	+1	known	missense	c.187	p.G63S	0.592	NULL	pfam_Ankyrin_rpt,pfam_KH_dom_type_1,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_KH_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_KH_dom_type_1,prints_Ankyrin_rpt	-	no_errors	ANKHD1	HGNC	ENSG00000131503	tier1	-	-	16	0	0.00	12	6	33.33
ANKK1	0	genome.wustl.edu	37	11	113270316	113270316	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	113270316	113270316	C	T	SNP	ANKK1	ENST00000303941	human	ensembl	74_37	+1	known	missense	c.1625	p.A542V	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	ANKK1	HGNC	ENSG00000170209	tier1	-	-	47	0	0.00	26	10	27.78
ANKMY1	0	genome.wustl.edu	37	2	241459933	241459933	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	241459933	241459933	C	T	SNP	ANKMY1	ENST00000272972	human	ensembl	74_37	-1	known	missense	c.1583	p.R528Q	0.017	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt	pfam_Ankyrin_rpt,pfam_MORN,pfam_Znf_MYND,superfamily_Ankyrin_rpt-contain_dom,smart_MORN,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Znf_MYND	-	no_errors	ANKMY1	HGNC	ENSG00000144504	tier1	-	-	39	0	0.00	23	5	17.86
ANKMY1	0	genome.wustl.edu	37	2	241494373	241494373	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	241494373	241494373	C	T	SNP	ANKMY1	ENST00000361678	human	ensembl	74_37	-1	known	silent	c.246	p.V82	0.175	NULL	pfam_MORN,pfam_Znf_MYND,superfamily_Ankyrin_rpt-contain_dom,smart_MORN,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Znf_MYND	-	no_errors	ANKMY1	HGNC	ENSG00000144504	tier1	-	-	26	0	0.00	29	8	21.62
ANKMY2	0	genome.wustl.edu	37	7	16640464	16640464	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	16640464	16640464	C	T	SNP	ANKMY2	ENST00000306999	human	ensembl	74_37	-1	known	silent	c.1248	p.K416	0.006	NULL	pfam_Ankyrin_rpt,pfam_Znf_MYND,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Znf_MYND	-	no_errors	ANKMY2	HGNC	ENSG00000106524				43	0	0.00	25	2	7.41
ANKRD11	0	genome.wustl.edu	37	16	89347410	89347410	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	89347410	89347410	G	A	SNP	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	missense	c.5540	p.S1847L	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522	tier1	-	-	40	0	0.00	23	10	30.30
ANKRD11	0	genome.wustl.edu	37	16	89349640	89349641	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	89349640	89349641	-	T	INS	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	frame_shift_ins	c.3310_3309	p.D1103fs	1.000:1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522	tier1			42	0	0.00	28	7	20.00
ANKRD11	0	genome.wustl.edu	37	16	89357574	89357574	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	89357574	89357574	G	A	SNP	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	missense	c.244	p.R82W	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522	tier1	-	-	41	0	0.00	16	17	51.52
ANKRD20A19P	0	genome.wustl.edu	37	13	24515468	24515468	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	24515468	24515468	T	-	DEL	ANKRD20A19P	ENST00000420143	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.055	-	-	-	no_errors	ANKRD20A19P	HGNC	ENSG00000196593	tier1			154	0	0.00	145	70	32.56
ANKRD20A4	0	genome.wustl.edu	37	9	69421905	69421905	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	69421905	69421905	A	0	DEL	ANKRD20A4	ENST00000357336	human	ensembl	74_37	+1	known	frame_shift_del	c.1369	p.N459fs	0.373	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD20A4	HGNC	ENSG00000172014				64	0	0.00	55	8	12.70
ANKRD20A5P	0	genome.wustl.edu	37	18	14179418	14179418	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	14179418	14179418	C	T	SNP	ANKRD20A5P	ENST00000581181	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ANKRD20A5P	HGNC	ENSG00000186481	tier1	-	-	110	0	0.00	61	34	35.79
ANKRD20A8P	0	genome.wustl.edu	37	2	95483039	95483039	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	95483039	95483039	T	0	DEL	ANKRD20A8P	ENST00000432432	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.232	-	-	-	no_errors	ANKRD20A8P	HGNC	ENSG00000229089				71	0	0.00	45	32	41.56
ANKRD26	0	genome.wustl.edu	37	10	27368033	27368033	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	27368033	27368033	G	A	SNP	ANKRD26	ENST00000436985	human	ensembl	74_37	-1	known	silent	c.945	p.L315	0.000	NULL	pfam_DUF3496,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Polyketide_synth_docking,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD26	HGNC	ENSG00000107890	tier1	-	-	40	0	0.00	36	26	41.94
ANKRD27	0	genome.wustl.edu	37	19	33130392	33130392	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	33130392	33130392	A	G	SNP	ANKRD27	ENST00000306065	human	ensembl	74_37	-1	known	missense	c.986	p.M329T	1.000	pfam_VPS9,smart_VPS9_subgr,pfscan_VPS9	pfam_Ankyrin_rpt,pfam_VPS9,superfamily_Ankyrin_rpt-contain_dom,smart_VPS9_subgr,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_VPS9,prints_Ankyrin_rpt	-	no_errors	ANKRD27	HGNC	ENSG00000105186	tier1	-	-	63	0	0.00	37	6	13.95
ANKRD30A	0	genome.wustl.edu	37	10	37431116	37431116	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	37431116	37431116	G	A	SNP	ANKRD30A	ENST00000361713	human	ensembl	74_37	+1	known	missense	c.1123	p.V375M	0.014	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30A	HGNC	ENSG00000148513				24	0	0.00	4	2	33.33
ANKRD30BP2	0	genome.wustl.edu	37	21	14421333	14421333	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	14421333	14421333	C	A	SNP	ANKRD30BP2	ENST00000471407	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ANKRD30BP2	HGNC	ENSG00000224309	tier1	-	-	76	0	0.00	46	25	35.21
ANKRD35	0	genome.wustl.edu	37	1	145562534	145562534	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	145562534	145562534	G	A	SNP	ANKRD35	ENST00000355594	human	ensembl	74_37	+1	known	missense	c.2222	p.R741Q	0.052	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD35	HGNC	ENSG00000198483	tier1	-	-	60	0	0.00	27	24	47.06
ANKRD35	0	genome.wustl.edu	37	1	145562653	145562653	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	145562653	145562653	G	T	SNP	ANKRD35	ENST00000355594	human	ensembl	74_37	+1	known	missense	c.2341	p.A781S	0.988	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD35	HGNC	ENSG00000198483	tier1	-	-	80	0	0.00	33	24	42.11
ANKRD36	0	genome.wustl.edu	37	2	97899538	97899538	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	97899538	97899538	C	T	SNP	ANKRD36	ENST00000420699	human	ensembl	74_37	+1	known	silent	c.4101	p.D1367	0.094	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD36	HGNC	ENSG00000135976	tier1	-	-	29	0	0.00	25	13	34.21
ANKRD36C	0	genome.wustl.edu	37	2	96592969	96592969	+	Silent	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	96592969	96592969	A	C	SNP	ANKRD36C	ENST00000456556	human	ensembl	74_37	-1	known	silent	c.1932	p.S644	0.001	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD36C	HGNC	ENSG00000174501	tier1	-	-	187	0	0.00	106	109	50.70
ANKRD42	0	genome.wustl.edu	37	11	82966931	82966932	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	82966931	82966932	AA	-	DEL	ANKRD42	ENST00000260047	human	ensembl	74_37	+1	putative	frame_shift_del	c.1509_1510	p.K506fs	0.991:1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD42	HGNC	ENSG00000137494	tier1			54	0	0.00	33	21	38.89
ANKRD49	0	genome.wustl.edu	37	11	94230120	94230120	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	94230120	94230120	A	-	DEL	ANKRD49	ENST00000534911	human	ensembl	74_37	+1	known	frame_shift_del	c.261	p.K90fs	1.000	NULL	NULL	-	no_errors	ANKRD49	HGNC	ENSG00000168876	tier1			17	0	0.00	14	11	44.00
ANKRD50	0	genome.wustl.edu	37	4	125593559	125593559	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	125593559	125593559	C	T	SNP	ANKRD50	ENST00000504087	human	ensembl	74_37	-1	known	missense	c.873	p.M291I	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD50	HGNC	ENSG00000151458	tier1	-	-	46	0	0.00	34	10	22.73
ANKS1A	0	genome.wustl.edu	37	6	35051266	35051266	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	35051266	35051266	G	A	SNP	ANKS1A	ENST00000360359	human	ensembl	74_37	+1	known	missense	c.2980	p.D994N	1.000	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_PTB/PI_dom,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,smart_PTB/PI_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PTB/PI_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS1A	HGNC	ENSG00000064999	tier1	rs201592159	-	40	0	0.00	13	14	51.85
ANO1	0	genome.wustl.edu	37	11	70009451	70009451	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	70009451	70009451	C	T	SNP	ANO1	ENST00000316296	human	ensembl	74_37	+1	known	missense	c.1781	p.T594I	0.000	NULL	pfam_Anoctamin	-	no_errors	ANO1	HGNC	ENSG00000131620	tier1	-	-	50	0	0.00	18	12	40.00
ANO2	0	genome.wustl.edu	37	12	5687598	5687598	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	5687598	5687598	G	T	SNP	ANO2	ENST00000356134	human	ensembl	74_37	-1	known	silent	c.2323	p.R775	0.981	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO2	HGNC	ENSG00000047617	tier1	-	-	49	0	0.00	39	63	61.76
ANO9	0	genome.wustl.edu	37	11	428562	428562	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	428562	428562	G	A	SNP	ANO9	ENST00000332826	human	ensembl	74_37	-1	known	silent	c.1098	p.A366	0.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO9	HGNC	ENSG00000185101	tier1	-	-	57	0	0.00	29	13	30.95
ANP32A	0	genome.wustl.edu	37	15	69072248	69072248	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	69072248	69072248	G	A	SNP	ANP32A	ENST00000267918	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.981	-	-	-	no_errors	ANP32A	HGNC	ENSG00000140350	tier1	-	-	10	0	0.00	3	5	62.50
ANP32BP1	0	genome.wustl.edu	37	15	75614855	75614855	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	75614855	75614855	C	A	SNP	ANP32BP1	ENST00000564205	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.670	-	-	-	no_errors	ANP32BP1	HGNC	ENSG00000259790	tier1	-	-	101	0	0.00	58	39	40.21
ANXA9	0	genome.wustl.edu	37	1	150955885	150955885	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	150955885	150955885	G	T	SNP	ANXA9	ENST00000368947	human	ensembl	74_37	+1	known	missense	c.147	p.R49S	1.000	pfam_Annexin_repeat,prints_AnnexinXXXI	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinXXXI	-	no_errors	ANXA9	HGNC	ENSG00000143412	tier1	-	-	41	0	0.00	69	4	5.48
AOC2	0	genome.wustl.edu	37	17	40996995	40996995	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	40996995	40996995	C	T	SNP	AOC2	ENST00000253799	human	ensembl	74_37	+1	known	missense	c.352	p.R118W	0.999	pfam_Cu_amine_oxidase_N2,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	pfam_Cu_amine_oxidase_C,pfam_Cu_amine_oxidase_N3,pfam_Cu_amine_oxidase_N2,superfamily_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	-	no_errors	AOC2	HGNC	ENSG00000131480	tier1	rs200726584	-	80	0	0.00	27	17	38.64
AP1M1	0	genome.wustl.edu	37	19	16314384	16314384	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	16314384	16314384	G	-	DEL	AP1M1	ENST00000444449	human	ensembl	74_37	+1	known	frame_shift_del	c.157	p.V55fs	1.000	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_Clathrin_mu	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_errors	AP1M1	HGNC	ENSG00000072958	tier1			79	0	0.00	63	24	27.59
AP3B1	0	genome.wustl.edu	37	5	77334907	77334907	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	77334907	77334907	T	-	DEL	AP3B1	ENST00000255194	human	ensembl	74_37	-1	known	frame_shift_del	c.2769	p.K923fs	0.419	pirsf_AP3_beta	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP3_beta	-	no_errors	AP3B1	HGNC	ENSG00000132842	tier1			69	0	0.00	58	25	30.12
AP4B1	0	genome.wustl.edu	37	1	114438761	114438761	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	114438761	114438761	A	G	SNP	AP4B1	ENST00000479285	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AP4B1	HGNC	ENSG00000134262	tier1	-	-	17	0	0.00	14	14	50.00
APAF1	0	genome.wustl.edu	37	12	99109237	99109237	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	99109237	99109237	G	A	SNP	APAF1	ENST00000551964	human	ensembl	74_37	+1	known	silent	c.2991	p.Q997	0.011	superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Apoptotic_pept-activating_1,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_NB-ARC,pfam_CARD,superfamily_WD40_repeat_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pirsf_Apoptotic_pept-activating_1,pfscan_CARD,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Disease_R,prints_G-protein_beta_WD-40_rep	-	no_errors	APAF1	HGNC	ENSG00000120868	tier1	-	-	61	0	0.00	37	16	30.19
APAF1	0	genome.wustl.edu	37	12	99128498	99128498	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	99128498	99128498	G	A	SNP	APAF1	ENST00000547666	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	APAF1	HGNC	ENSG00000120868	tier1	-	-	108	0	0.00	77	36	31.58
APBB1	0	genome.wustl.edu	37	11	6422905	6422905	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	6422905	6422905	C	T	SNP	APBB1	ENST00000389906	human	ensembl	74_37	-1	known	missense	c.1402	p.V468I	1.000	pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_PTB/PI_dom,pfam_WW_dom,pfam_PTB,superfamily_WW_dom,smart_WW_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom,pfscan_WW_dom	-	no_errors	APBB1	HGNC	ENSG00000166313	tier1	-	-	70	0	0.00	32	26	44.83
APC	0	genome.wustl.edu	37	5	112043282	112043283	+	RNA	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	112043282	112043283	-	G	INS	APC	ENST00000505350	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.028:0.026	-	-	-	no_errors	APC	HGNC	ENSG00000134982	tier1			19	0	0.00	11	6	35.29
APC	0	genome.wustl.edu	37	5	112154722	112154722	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	112154722	112154722	G	A	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	silent	c.993	p.S331	0.109	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982	tier1	rs148343173	-	60	0	0.00	37	20	35.09
APLNR	0	genome.wustl.edu	37	11	57003870	57003870	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	57003870	57003870	G	T	SNP	APLNR	ENST00000257254	human	ensembl	74_37	-1	known	silent	c.609	p.V203	0.871	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_ATII_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM,prints_APJ_rcpt,prints_GPCR_Rhodpsn,prints_ATII_rcpt	-	no_errors	APLNR	HGNC	ENSG00000134817	tier1	-	-	55	0	0.00	25	4	13.79
APOBEC3D	0	genome.wustl.edu	37	22	39421260	39421260	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	39421260	39421260	C	T	SNP	APOBEC3D	ENST00000216099	human	ensembl	74_37	+1	known	silent	c.396	p.A132	0.032	pfam_APOBEC_N,superfamily_Cytidine_deaminase-like	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	APOBEC3D	HGNC	ENSG00000243811	tier1	-	-	66	0	0.00	39	29	42.03
APOBR	0	genome.wustl.edu	37	16	28507636	28507636	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	28507636	28507636	C	T	SNP	APOBR	ENST00000564831	human	ensembl	74_37	+1	known	missense	c.1274	p.P425L	0.000	NULL	NULL	-	no_errors	APOBR	HGNC	ENSG00000184730	tier1	-	-	29	0	0.00	20	15	42.86
APOC1	0	genome.wustl.edu	37	19	45419665	45419666	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	45419665	45419666	-	A	INS	APOC1	ENST00000592885	human	ensembl	74_37	+1	novel	frame_shift_ins	c.277_278	p.T96fs	0.009:0.005	NULL	pfam_ApoC-I	-	no_errors	APOC1	HGNC	ENSG00000130208	tier1			24	0	0.00	19	8	29.63
APPL1	0	genome.wustl.edu	37	3	57276921	57276921	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	57276921	57276921	A	-	DEL	APPL1	ENST00000288266	human	ensembl	74_37	+1	known	frame_shift_del	c.453	p.R154fs	0.881	NULL	pfam_PTB/PI_dom,smart_Pleckstrin_homology,smart_PTB/PI_dom,pfscan_Pleckstrin_homology,pfscan_PTB/PI_dom	-	no_errors	APPL1	HGNC	ENSG00000157500	tier1			134	0	0.00	103	51	33.12
APPL2	0	genome.wustl.edu	37	12	105589058	105589059	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	105589058	105589059	-	T	INS	APPL2	ENST00000551662	human	ensembl	74_37	-1	known	frame_shift_ins	c.1240_1239	p.Q413fs	0.817:0.836	NULL	pfam_PTB/PI_dom,pfam_Pleckstrin_homology,pfam_PTB,smart_Pleckstrin_homology,smart_PTB/PI_dom,pfscan_Pleckstrin_homology,pfscan_PTB/PI_dom	-	no_errors	APPL2	HGNC	ENSG00000136044	tier1			120	0	0.00	109	44	28.76
APPL2	0	genome.wustl.edu	37	12	105600899	105600899	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	105600899	105600899	C	T	SNP	APPL2	ENST00000551662	human	ensembl	74_37	-1	known	silent	c.579	p.A193	0.048	NULL	pfam_PTB/PI_dom,pfam_Pleckstrin_homology,pfam_PTB,smart_Pleckstrin_homology,smart_PTB/PI_dom,pfscan_Pleckstrin_homology,pfscan_PTB/PI_dom	-	no_errors	APPL2	HGNC	ENSG00000136044	tier1	-	-	52	0	0.00	26	7	21.21
APRT	0	genome.wustl.edu	37	16	88876196	88876196	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	88876196	88876196	C	T	SNP	APRT	ENST00000378364	human	ensembl	74_37	-1	known	silent	c.453	p.L151	1.000	pfam_PRibTrfase_dom,tigrfam_Ade_phspho_trans	pfam_PRibTrfase_dom,tigrfam_Ade_phspho_trans	-	no_errors	APRT	HGNC	ENSG00000198931	tier1	-	-	45	0	0.00	47	4	7.84
AQP10	0	genome.wustl.edu	37	1	154296077	154296077	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	154296077	154296077	G	T	SNP	AQP10	ENST00000324978	human	ensembl	74_37	+1	known	missense	c.502	p.G168W	0.000	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,tigrfam_MIP	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,prints_Aquaporin_10,prints_Aquaporin_3,tigrfam_MIP	-	no_errors	AQP10	HGNC	ENSG00000143595	tier1	-	-	125	0	0.00	119	40	25.16
AQP12A	0	genome.wustl.edu	37	2	241631890	241631890	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	241631890	241631890	T	C	SNP	AQP12A	ENST00000429564	human	ensembl	74_37	+1	known	missense	c.559	p.Y187H	0.018	pfam_MIP,superfamily_Aquaporin-like,pirsf_Aquaporin_11/12,prints_Aquaporin_12	pfam_MIP,superfamily_Aquaporin-like,pirsf_Aquaporin_11/12,prints_Aquaporin_12,prints_MIP	-	no_errors	AQP12A	HGNC	ENSG00000184945	tier1	-	-	39	0	0.00	30	6	16.67
AQP12B	0	genome.wustl.edu	37	2	241621696	241621696	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	241621696	241621696	A	G	SNP	AQP12B	ENST00000407834	human	ensembl	74_37	-1	known	missense	c.559	p.Y187H	0.066	pfam_MIP,superfamily_Aquaporin-like,pirsf_Aquaporin_11/12,prints_Aquaporin_12	pfam_MIP,superfamily_Aquaporin-like,pirsf_Aquaporin_11/12,prints_Aquaporin_12,prints_MIP	-	no_errors	AQP12B	HGNC	ENSG00000185176	tier1	-	-	20	0	0.00	10	4	28.57
AQP3	0	genome.wustl.edu	37	9	33443746	33443746	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	33443746	33443746	G	T	SNP	AQP3	ENST00000493581	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	AQP3	HGNC	ENSG00000165272	tier1	-	-	62	0	0.00	39	4	9.30
AQPEP	0	genome.wustl.edu	37	5	115327857	115327857	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	115327857	115327857	G	T	SNP	AQPEP	ENST00000357872	human	ensembl	74_37	+1	known	missense	c.1143	p.M381I	1.000	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	AQPEP	Uniprot_gn	ENSG00000172901	tier1	-	-	33	0	0.00	31	5	13.89
ARAP2	0	genome.wustl.edu	37	4	36160352	36160352	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	36160352	36160352	C	A	SNP	ARAP2	ENST00000303965	human	ensembl	74_37	-1	known	nonsense	c.2752	p.E918*	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_SAM_2,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP2	HGNC	ENSG00000047365	tier1	-	-	45	0	0.00	20	10	33.33
ARAP2	0	genome.wustl.edu	37	4	36212270	36212270	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	36212270	36212270	G	T	SNP	ARAP2	ENST00000303965	human	ensembl	74_37	-1	known	missense	c.1229	p.A410D	0.967	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_SAM_2,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP2	HGNC	ENSG00000047365	tier1	-	-	47	0	0.00	58	4	6.35
ARAP3	0	genome.wustl.edu	37	5	141052865	141052866	+	RNA	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	141052865	141052866	-	C	INS	ARAP3	ENST00000524066	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	ARAP3	HGNC	ENSG00000120318	tier1			18	0	0.00	17	4	19.05
ARFGEF1	0	genome.wustl.edu	37	8	68113742	68113742	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	68113742	68113742	G	A	SNP	ARFGEF1	ENST00000262215	human	ensembl	74_37	-1	known	missense	c.5227	p.R1743C	1.000	NULL	pfam_Sec7_dom,pfam_DUF1981_Sec7_assoc,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	ARFGEF1	HGNC	ENSG00000066777	tier1	-	-	59	0	0.00	52	21	28.77
ARFIP1	0	genome.wustl.edu	37	4	153833145	153833145	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	153833145	153833145	A	-	DEL	ARFIP1	ENST00000510497	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARFIP1	HGNC	ENSG00000164144	tier1			23	0	0.00	18	14	43.75
ARG1	0	genome.wustl.edu	37	6	131894346	131894346	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	131894346	131894346	A	-	DEL	ARG1	ENST00000469293	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.285	-	-	-	no_errors	ARG1	HGNC	ENSG00000118520	tier1			23	0	0.00	16	8	33.33
ARGLU1	0	genome.wustl.edu	37	13	107196174	107196177	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	107196174	107196177	AAAA	-	DEL	ARGLU1	ENST00000472226	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.246:0.234:0.000	-	-	-	no_errors	ARGLU1	HGNC	ENSG00000134884	tier1			13	0	0.00	22	3	12.00
ARHGAP23	0	genome.wustl.edu	37	17	36623506	36623506	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	36623506	36623506	C	T	SNP	ARHGAP23	ENST00000431231	human	ensembl	74_37	+1	known	missense	c.1582	p.R528C	0.196	NULL	pfam_RhoGAP_dom,pfam_PDZ,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP23	HGNC	ENSG00000225485	tier1	-	-	48	0	0.00	18	18	50.00
ARHGAP25	0	genome.wustl.edu	37	2	69002247	69002247	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	69002247	69002247	C	-	DEL	ARHGAP25	ENST00000463061	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARHGAP25	HGNC	ENSG00000163219	tier1			38	0	0.00	18	11	37.93
ARHGEF11	0	genome.wustl.edu	37	1	156904838	156904838	+	RNA	SNP	G	G	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	156904838	156904838	G	C	SNP	ARHGEF11	ENST00000487682	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.026	-	-	-	no_errors	ARHGEF11	HGNC	ENSG00000132694	tier1	-	-	83	0	0.00	84	17	16.83
ARHGEF15	0	genome.wustl.edu	37	17	8224297	8224298	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	8224297	8224298	-	C	INS	ARHGEF15	ENST00000361926	human	ensembl	74_37	+1	known	frame_shift_ins	c.2512_2513	p.P841fs	0.000:0.001	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF15	HGNC	ENSG00000198844	tier1			28	0	0.00	20	5	20.00
ARHGEF18	0	genome.wustl.edu	37	19	7504999	7504999	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	7504999	7504999	C	T	SNP	ARHGEF18	ENST00000359920	human	ensembl	74_37	+1	known	missense	c.173	p.A58V	0.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF18	HGNC	ENSG00000104880	tier1	-	-	55	0	0.00	25	16	39.02
ARHGEF18	0	genome.wustl.edu	37	19	7534888	7534888	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	7534888	7534888	G	A	SNP	ARHGEF18	ENST00000359920	human	ensembl	74_37	+1	known	missense	c.3322	p.G1108S	0.001	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF18	HGNC	ENSG00000104880	tier1	-	-	43	0	0.00	16	12	42.86
ARHGEF25	0	genome.wustl.edu	37	12	58008378	58008378	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	58008378	58008378	G	A	SNP	ARHGEF25	ENST00000333972	human	ensembl	74_37	+1	known	missense	c.923	p.S308N	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF25	HGNC	ENSG00000240771	tier1	-	-	74	0	0.00	68	4	5.56
ARHGEF26	0	genome.wustl.edu	37	3	153973715	153973715	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	153973715	153973715	T	-	DEL	ARHGEF26	ENST00000483068	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ARHGEF26	HGNC	ENSG00000114790	tier1			15	0	0.00	4	9	69.23
ARHGEF37	0	genome.wustl.edu	37	5	148980676	148980676	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	148980676	148980676	G	A	SNP	ARHGEF37	ENST00000333677	human	ensembl	74_37	+1	known	silent	c.192	p.P64	0.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_BAR_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF37	HGNC	ENSG00000183111	tier1	-	-	68	0	0.00	54	25	31.65
ARID1A	0	genome.wustl.edu	37	1	27099461	27099462	+	Frame_Shift_Ins	INS	-	-	TG			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	27099461	27099462	-	TG	INS	ARID1A	ENST00000324856	human	ensembl	74_37	+1	known	frame_shift_ins	c.3698_3699	p.G1234fs	1.000:1.000	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1A	HGNC	ENSG00000117713	tier1			27	0	0.00	24	13	35.14
ARID5A	0	genome.wustl.edu	37	2	97216896	97216896	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	97216896	97216896	C	-	DEL	ARID5A	ENST00000357485	human	ensembl	74_37	+1	known	frame_shift_del	c.631	p.R213fs	0.000	NULL	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID5A	HGNC	ENSG00000196843	tier1			40	0	0.00	24	2	7.69
ARMC4	0	genome.wustl.edu	37	10	28233164	28233164	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	28233164	28233164	C	-	DEL	ARMC4	ENST00000305242	human	ensembl	74_37	-1	known	frame_shift_del	c.1730	p.G577fs	1.000	superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_GSKIP_dom,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC4	HGNC	ENSG00000169126	tier1			67	0	0.00	40	25	38.46
ARMC5	0	genome.wustl.edu	37	16	31474229	31474229	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	31474229	31474229	G	A	SNP	ARMC5	ENST00000408912	human	ensembl	74_37	+1	known	missense	c.1646	p.R549Q	0.960	NULL	superfamily_ARM-type_fold,superfamily_BTB/POZ_fold,smart_Armadillo,pfscan_Armadillo,pfscan_BTB/POZ-like	-	no_errors	ARMC5	HGNC	ENSG00000140691	tier1	-	-	43	0	0.00	28	11	28.21
ARNTL2	0	genome.wustl.edu	37	12	27573424	27573424	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	27573424	27573424	G	T	SNP	ARNTL2	ENST00000266503	human	ensembl	74_37	+1	known	nonsense	c.1870	p.G624*	0.984	NULL	pfam_PAS_fold,pfam_PAS_fold_3,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,prints_Nuc_translocat,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	ARNTL2	HGNC	ENSG00000029153				25	0	0.00	57	4	6.56
ARSD	0	genome.wustl.edu	37	X	2828792	2828792	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	2828792	2828792	G	T	SNP	ARSD	ENST00000381154	human	ensembl	74_37	-1	known	nonsense	c.1043	p.S348*	0.016	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSD	HGNC	ENSG00000006756	tier1	-	-	61	0	0.00	69	4	5.48
ARSD-AS1	0	genome.wustl.edu	37	X	2822945	2822947	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	2822945	2822947	TTT	-	DEL	ARSD-AS1	ENST00000414053	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012:0.010:0.007	-	-	-	no_errors	ARSD-AS1	HGNC	ENSG00000229851	tier1			18	0	0.00	5	5	50.00
ARSJ	0	genome.wustl.edu	37	4	114823494	114823494	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	114823494	114823494	T	-	DEL	ARSJ	ENST00000315366	human	ensembl	74_37	-1	known	frame_shift_del	c.1736	p.K579fs	0.628	NULL	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSJ	HGNC	ENSG00000180801	tier1			23	0	0.00	3	7	70.00
ARVCF	0	genome.wustl.edu	37	22	19967479	19967479	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	19967479	19967479	G	A	SNP	ARVCF	ENST00000263207	human	ensembl	74_37	-1	known	missense	c.1183	p.R395C	0.989	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARVCF	HGNC	ENSG00000099889	tier1	-	-	24	0	0.00	14	6	30.00
ASCC2	0	genome.wustl.edu	37	22	30189349	30189349	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	30189349	30189349	C	A	SNP	ASCC2	ENST00000307790	human	ensembl	74_37	-1	known	missense	c.1919	p.R640M	1.000	NULL	pfam_CUE,superfamily_UBA-like,smart_CUE,pfscan_CUE	-	no_errors	ASCC2	HGNC	ENSG00000100325	tier1	-	-	51	0	0.00	30	16	34.78
ASF1A	0	genome.wustl.edu	37	6	119226836	119226836	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	119226836	119226836	G	T	SNP	ASF1A	ENST00000229595	human	ensembl	74_37	+1	known	missense	c.245	p.G82V	1.000	pfam_Histone_chaperone_ASF1-like,superfamily_Histone_chaperone_ASF1-like	pfam_Histone_chaperone_ASF1-like,superfamily_Histone_chaperone_ASF1-like	-	no_errors	ASF1A	HGNC	ENSG00000111875	tier1	-	-	55	0	0.00	47	5	9.62
ASH2L	0	genome.wustl.edu	37	8	37985908	37985908	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	37985908	37985908	A	G	SNP	ASH2L	ENST00000343823	human	ensembl	74_37	+1	known	missense	c.1265	p.Y422C	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	-	no_errors	ASH2L	HGNC	ENSG00000129691	tier1	-	-	62	0	0.00	65	27	29.35
ASIC1	0	genome.wustl.edu	37	12	50467800	50467800	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	50467800	50467800	C	T	SNP	ASIC1	ENST00000552438	human	ensembl	74_37	+1	putative	missense	c.433	p.R145W	1.000	pfam_Na+channel_ASC,prints_Na+channel_ASC	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	-	no_errors	ASIC1	HGNC	ENSG00000110881	tier1	-	-	43	0	0.00	21	24	53.33
ASNSD1	0	genome.wustl.edu	37	2	190530112	190530112	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	190530112	190530112	G	T	SNP	ASNSD1	ENST00000607829	human	ensembl	74_37	+1	putative	missense	c.155	p.R52M	0.841	NULL	NULL	-	no_errors	ASNSD1	HGNC	ENSG00000138381	tier1	-	-	65	0	0.00	25	19	43.18
ASPM	0	genome.wustl.edu	37	1	197073232	197073232	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	197073232	197073232	T	-	DEL	ASPM	ENST00000367409	human	ensembl	74_37	-1	known	frame_shift_del	c.5149	p.I1717fs	0.000	superfamily_ARM-type_fold	pfam_IQ_motif_EF-hand-BS,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_CH-domain,smart_IQ_motif_EF-hand-BS,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS	-	no_errors	ASPM	HGNC	ENSG00000066279	tier1			53	0	0.00	77	19	19.79
ASTE1	0	genome.wustl.edu	37	3	130733047	130733047	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	130733047	130733047	T	-	DEL	ASTE1	ENST00000264992	human	ensembl	74_37	-1	known	frame_shift_del	c.1894	p.R632fs	0.014	NULL	pfam_XPG_DNA_repair_N	-	no_errors	ASTE1	HGNC	ENSG00000034533	tier1			17	0	0.00	18	8	30.77
ASTN1	0	genome.wustl.edu	37	1	176833508	176833508	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	176833508	176833508	G	A	SNP	ASTN1	ENST00000367654	human	ensembl	74_37	-1	known	missense	c.3821	p.A1274V	0.976	NULL	superfamily_Fibronectin_type3,smart_EG-like_dom,smart_MACPF,pfscan_Fibronectin_type3	-	no_errors	ASTN1	HGNC	ENSG00000152092	tier1	-	-	64	0	0.00	35	15	30.00
ASXL1	0	genome.wustl.edu	37	20	31021423	31021423	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	31021423	31021423	C	T	SNP	ASXL1	ENST00000375687	human	ensembl	74_37	+1	known	silent	c.1422	p.P474	0.000	NULL	NULL	-	no_errors	ASXL1	HGNC	ENSG00000171456	tier1	-	-	52	0	0.00	16	16	50.00
ATAD2	0	genome.wustl.edu	37	8	124384893	124384893	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	124384893	124384893	T	-	DEL	ATAD2	ENST00000287394	human	ensembl	74_37	-1	known	frame_shift_del	c.354	p.E119fs	0.995	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2	HGNC	ENSG00000156802	tier1			36	0	0.00	41	26	38.81
ATCAY	0	genome.wustl.edu	37	19	3913846	3913846	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	3913846	3913846	C	T	SNP	ATCAY	ENST00000301260	human	ensembl	74_37	+1	known	silent	c.957	p.C319	0.937	smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	ATCAY	HGNC	ENSG00000167654	tier1	-	-	33	0	0.00	30	16	34.78
ATF6	0	genome.wustl.edu	37	1	161751764	161751764	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	161751764	161751764	G	T	SNP	ATF6	ENST00000367942	human	ensembl	74_37	+1	known	missense	c.222	p.W74C	0.984	NULL	pfam_bZIP,smart_bZIP,pfscan_bZIP	-	no_errors	ATF6	HGNC	ENSG00000118217	tier1	-	-	53	0	0.00	69	4	5.48
ATF7IP	0	genome.wustl.edu	37	12	14649259	14649261	+	In_Frame_Del	DEL	ACC	ACC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	ACC	ACC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	14649259	14649261	ACC	-	DEL	ATF7IP	ENST00000261168	human	ensembl	74_37	+1	known	in_frame_del	c.3375_3377	p.P1127in_frame_del	0.882:1.000:1.000	NULL	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	ATF7IP	HGNC	ENSG00000171681	tier1			26	0	0.00	51	16	23.88
ATG2B	0	genome.wustl.edu	37	14	96783572	96783572	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	96783572	96783572	T	-	DEL	ATG2B	ENST00000359933	human	ensembl	74_37	-1	known	frame_shift_del	c.3120	p.K1040fs	0.052	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2B	HGNC	ENSG00000066739	tier1			33	0	0.00	37	12	24.49
ATG2B	0	genome.wustl.edu	37	14	96788614	96788614	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	96788614	96788614	A	-	DEL	ATG2B	ENST00000488421	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ATG2B	HGNC	ENSG00000066739	tier1			18	0	0.00	32	8	20.00
ATG9A	0	genome.wustl.edu	37	2	220089461	220089461	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	220089461	220089461	C	T	SNP	ATG9A	ENST00000361242	human	ensembl	74_37	-1	known	missense	c.632	p.R211H	1.000	pfam_Autophagy-rel_prot_9	pfam_Autophagy-rel_prot_9,superfamily_Cyt_c_oxidase_su3	-	no_errors	ATG9A	HGNC	ENSG00000198925	tier1	-	-	38	0	0.00	36	16	30.77
ATG9B	0	genome.wustl.edu	37	7	150709313	150709314	+	RNA	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	150709313	150709314	-	T	INS	ATG9B	ENST00000494791	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ATG9B	HGNC	ENSG00000181652	tier1			8	0	0.00	4	6	60.00
ATG9B	0	genome.wustl.edu	37	7	150720306	150720307	+	RNA	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	150720306	150720307	-	G	INS	ATG9B	ENST00000473698	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.007	-	-	-	no_errors	ATG9B	HGNC	ENSG00000181652	tier1			51	0	0.00	36	12	25.00
ATG9B	0	genome.wustl.edu	37	7	150721484	150721484	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	150721484	150721484	C	0	DEL	ATG9B	ENST00000377974	human	ensembl	74_37	-1	known	frame_shift_del	c.27	p.R10fs	0.511	NULL	pfam_Autophagy-rel_prot_9	-	no_errors	ATG9B	HGNC	ENSG00000181652				10	0	0.00	6	3	33.33
ATL3	0	genome.wustl.edu	37	11	63398665	63398665	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	63398665	63398665	G	T	SNP	ATL3	ENST00000332645	human	ensembl	74_37	-1	known	silent	c.1467	p.G489	1.000	NULL	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	ATL3	HGNC	ENSG00000184743				54	0	0.00	63	4	5.97
ATMIN	0	genome.wustl.edu	37	16	81077608	81077608	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	81077608	81077608	C	T	SNP	ATMIN	ENST00000299575	human	ensembl	74_37	+1	known	missense	c.1505	p.T502M	0.000	NULL	smart_Znf_C2H2-like	-	no_errors	ATMIN	HGNC	ENSG00000166454	tier1	-	-	46	0	0.00	29	13	30.95
ATP10A	0	genome.wustl.edu	37	15	25959230	25959230	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	25959230	25959230	C	T	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	silent	c.1935	p.P645	0.553	superfamily_HAD-like_dom	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190	tier1	-	-	196	0	0.00	88	58	39.73
ATP10A	0	genome.wustl.edu	37	15	26107956	26107956	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	26107956	26107956	C	A	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	silent	c.288	p.L96	1.000	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190	tier1	-	-	80	0	0.00	50	17	25.37
ATP10B	0	genome.wustl.edu	37	5	160067536	160067536	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	160067536	160067536	C	T	SNP	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	missense	c.932	p.R311Q	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10B	HGNC	ENSG00000118322	tier1	-	-	84	0	0.00	58	27	31.76
ATP13A2	0	genome.wustl.edu	37	1	17316763	17316763	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	17316763	17316763	C	T	SNP	ATP13A2	ENST00000326735	human	ensembl	74_37	-1	known	silent	c.2271	p.A757	0.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A2	HGNC	ENSG00000159363	tier1	-	-	76	0	0.00	30	19	38.78
ATP1A1	0	genome.wustl.edu	37	1	116927462	116927462	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	116927462	116927462	C	T	SNP	ATP1A1	ENST00000295598	human	ensembl	74_37	+1	known	missense	c.181	p.R61W	1.000	pfam_ATPase_P-typ_cation-transptr_N,smart_ATPase_P-typ_cation-transptr_N,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A1	HGNC	ENSG00000163399	tier1	-	-	74	0	0.00	49	25	33.78
ATP1A1	0	genome.wustl.edu	37	1	116930848	116930849	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	116930848	116930849	-	A	INS	ATP1A1	ENST00000295598	human	ensembl	74_37	+1	known	frame_shift_ins	c.483_484	p.N162fs	1.000:1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A1	HGNC	ENSG00000163399	tier1			30	0	0.00	25	9	26.47
ATP1A2	0	genome.wustl.edu	37	1	160091008	160091008	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	160091008	160091008	G	T	SNP	ATP1A2	ENST00000361216	human	ensembl	74_37	+1	known	missense	c.144	p.E48D	1.000	pfam_ATPase_P-typ_cation-transptr_N,smart_ATPase_P-typ_cation-transptr_N,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A2	HGNC	ENSG00000018625	tier1	-	-	82	0	0.00	112	6	5.08
ATP1A4	0	genome.wustl.edu	37	1	160125039	160125039	+	Splice_Site	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	160125039	160125039	G	A	SNP	ATP1A4	ENST00000368081	human	ensembl	74_37	+1	known	splice_site	c.411+1	e3+1	1.000	-	-	-	no_errors	ATP1A4	HGNC	ENSG00000132681	tier1	-	-	27	0	0.00	41	19	31.67
ATP2A1	0	genome.wustl.edu	37	16	28913313	28913313	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	28913313	28913313	G	A	SNP	ATP2A1	ENST00000357084	human	ensembl	74_37	+1	known	missense	c.2230	p.V744I	1.000	superfamily_HAD-like_dom,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A1	HGNC	ENSG00000196296	tier1	-	-	89	0	0.00	35	30	45.45
ATP2B1	0	genome.wustl.edu	37	12	90010583	90010583	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	90010583	90010583	G	T	SNP	ATP2B1	ENST00000261173	human	ensembl	74_37	-1	known	missense	c.2063	p.P688H	1.000	pfam_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B1	HGNC	ENSG00000070961				50	0	0.00	54	3	5.26
ATP2B4	0	genome.wustl.edu	37	1	203689833	203689833	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	203689833	203689833	G	A	SNP	ATP2B4	ENST00000357681	human	ensembl	74_37	+1	known	missense	c.2563	p.V855M	1.000	tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B4	HGNC	ENSG00000058668	tier1	-	-	109	0	0.00	91	39	30.00
ATP5G2	0	genome.wustl.edu	37	12	54063863	54063863	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	54063863	54063863	G	A	SNP	ATP5G2	ENST00000549748	human	ensembl	74_37	-1	known	silent	c.75	p.N25	0.000	NULL	NULL	-	no_errors	ATP5G2	HGNC	ENSG00000135390	tier1	-	-	8	0	0.00	6	4	40.00
ATP6V0A4	0	genome.wustl.edu	37	7	138413561	138413561	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	138413561	138413561	G	T	SNP	ATP6V0A4	ENST00000310018	human	ensembl	74_37	-1	known	missense	c.1955	p.P652Q	0.998	pfam_V-ATPase_116kDa_su	pfam_V-ATPase_116kDa_su	-	no_errors	ATP6V0A4	HGNC	ENSG00000105929	tier1	-	-	36	0	0.00	26	10	27.78
ATP6V0A4	0	genome.wustl.edu	37	7	138417705	138417705	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	138417705	138417705	C	T	SNP	ATP6V0A4	ENST00000310018	human	ensembl	74_37	-1	known	missense	c.1825	p.A609T	1.000	pfam_V-ATPase_116kDa_su	pfam_V-ATPase_116kDa_su	-	no_errors	ATP6V0A4	HGNC	ENSG00000105929	tier1	-	-	61	0	0.00	58	4	6.45
ATP8B3	0	genome.wustl.edu	37	19	1788961	1788963	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	1788961	1788963	AGA	-	DEL	ATP8B3	ENST00000539485	human	ensembl	74_37	-1	known	in_frame_del	c.3034_3032	p.F1011in_frame_del	1.000:1.000:1.000	tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B3	HGNC	ENSG00000130270	tier1			84	0	0.00	37	24	39.34
ATP8B3	0	genome.wustl.edu	37	19	1799764	1799766	+	In_Frame_Del	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	1799764	1799766	AAA	-	DEL	ATP8B3	ENST00000526092	human	ensembl	74_37	-1	putative	in_frame_del	c.1575_1573	p.F525in_frame_del	0.016:0.015:0.015	NULL	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom	-	no_errors	ATP8B3	HGNC	ENSG00000130270	tier1			9	0	0.00	9	5	35.71
ATP8B5P	0	genome.wustl.edu	37	9	35446471	35446471	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	35446471	35446471	G	A	SNP	ATP8B5P	ENST00000329395	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.487	-	-	-	no_errors	ATP8B5P	HGNC	ENSG00000179766	tier1	-	-	56	0	0.00	31	25	44.64
ATP9A	0	genome.wustl.edu	37	20	50235287	50235287	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	50235287	50235287	A	G	SNP	ATP9A	ENST00000338821	human	ensembl	74_37	-1	known	missense	c.2264	p.V755A	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9A	HGNC	ENSG00000054793	tier1	-	-	126	0	0.00	57	49	46.23
ATR	0	genome.wustl.edu	37	3	142274740	142274741	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	142274740	142274741	TT	-	DEL	ATR	ENST00000350721	human	ensembl	74_37	-1	known	frame_shift_del	c.2320_2319	p.K773fs	0.000:0.001	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_PIK-rel_kinase_FAT,pfam_UME,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_UME,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_HEAT_type_2,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATR	HGNC	ENSG00000175054	tier1			39	0	0.00	38	12	24.00
ATRX	0	genome.wustl.edu	37	X	76763680	76763681	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	76763680	76763681	AA	-	DEL	ATRX	ENST00000480283	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.001	-	-	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1			12	0	0.00	9	3	25.00
ATRX	0	genome.wustl.edu	37	X	76891501	76891501	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	76891501	76891501	G	T	SNP	ATRX	ENST00000373344	human	ensembl	74_37	-1	known	missense	c.4604	p.T1535N	1.000	superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ATRX	HGNC	ENSG00000085224				78	0	0.00	63	4	5.97
ATXN2	0	genome.wustl.edu	37	12	111926574	111926574	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	111926574	111926574	C	G	SNP	ATXN2	ENST00000377617	human	ensembl	74_37	-1	known	missense	c.2426	p.S809T	1.000	NULL	pfam_LsmAD_domain,pfam_Ataxin-2_C,superfamily_LSM_dom	-	no_errors	ATXN2	HGNC	ENSG00000204842	tier1	-	-	60	0	0.00	50	31	38.27
ATXN8OS	0	genome.wustl.edu	37	13	70713521	70713521	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	70713521	70713521	G	A	SNP	ATXN8OS	ENST00000414504	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ATXN8OS	HGNC	ENSG00000230223	tier1	rs5002471	-	37	0	0.00	60	8	11.76
ATXN8OS	0	genome.wustl.edu	37	13	70713524	70713524	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	70713524	70713524	G	A	SNP	ATXN8OS	ENST00000414504	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ATXN8OS	HGNC	ENSG00000230223	tier1	rs112128542	-	36	0	0.00	60	8	11.76
AXDND1	0	genome.wustl.edu	37	1	179363073	179363073	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	179363073	179363073	G	A	SNP	AXDND1	ENST00000367618	human	ensembl	74_37	+1	known	missense	c.899	p.R300Q	0.969	pfam_Axonemal_dynein_light_chain	pfam_Axonemal_dynein_light_chain	-	no_errors	AXDND1	HGNC	ENSG00000162779	tier1	-	-	65	0	0.00	74	46	38.33
AXL	0	genome.wustl.edu	37	19	41727120	41727120	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	41727120	41727120	C	T	SNP	AXL	ENST00000301178	human	ensembl	74_37	+1	known	silent	c.378	p.F126	0.020	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	AXL	HGNC	ENSG00000167601	tier1	-	-	120	0	0.00	64	48	42.86
AXL	0	genome.wustl.edu	37	19	41743933	41743933	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	41743933	41743933	C	-	DEL	AXL	ENST00000301178	human	ensembl	74_37	+1	known	frame_shift_del	c.868	p.H292fs	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	AXL	HGNC	ENSG00000167601	tier1			52	0	0.00	32	9	21.95
AZI1	0	genome.wustl.edu	37	17	79164775	79164775	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	79164775	79164775	C	T	SNP	AZI1	ENST00000269392	human	ensembl	74_37	-1	known	missense	c.2884	p.E962K	0.998	superfamily_t-SNARE	superfamily_t-SNARE	-	no_errors	AZI1	HGNC	ENSG00000141577	tier1	-	-	54	0	0.00	32	22	40.74
B2M	0	genome.wustl.edu	37	15	45003745	45003745	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	45003745	45003745	A	T	SNP	B2M	ENST00000544417	human	ensembl	74_37	+1	known	missense	c.1	p.M1L	0.685	NULL	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	B2M	HGNC	ENSG00000166710	tier1	-	-	62	0	0.00	22	25	53.19
B2M	0	genome.wustl.edu	37	15	45007798	45007801	+	Frame_Shift_Del	DEL	TCTA	TCTA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TCTA	TCTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	45007798	45007801	TCTA	-	DEL	B2M	ENST00000544417	human	ensembl	74_37	+1	known	frame_shift_del	c.245_248	p.Y83fs	1.000:1.000:0.992:0.989	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	B2M	HGNC	ENSG00000166710	tier1			93	0	0.00	65	27	29.35
B2M	0	genome.wustl.edu	37	15	45007801	45007801	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	45007801	45007801	A	T	SNP	B2M	ENST00000544417	human	ensembl	74_37	+1	known	missense	c.248	p.Y83F	0.989	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	B2M	HGNC	ENSG00000166710				97	0	0.00	59	5	7.35
B3GAT2	0	genome.wustl.edu	37	6	71666061	71666061	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	71666061	71666061	G	A	SNP	B3GAT2	ENST00000230053	human	ensembl	74_37	-1	known	silent	c.72	p.D24	1.000	NULL	pfam_Glyco_trans_43	-	no_errors	B3GAT2	HGNC	ENSG00000112309	tier1	-	-	69	0	0.00	19	13	40.62
B3GNT7	0	genome.wustl.edu	37	2	232263177	232263177	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	232263177	232263177	C	T	SNP	B3GNT7	ENST00000287590	human	ensembl	74_37	+1	known	silent	c.747	p.N249	1.000	pfam_Glyco_trans_31,pfam_Fringe-like	pfam_Glyco_trans_31,pfam_Fringe-like	-	no_errors	B3GNT7	HGNC	ENSG00000156966	tier1	-	-	30	0	0.00	13	3	18.75
B4GALNT1	0	genome.wustl.edu	37	12	58025103	58025103	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	58025103	58025103	C	-	DEL	B4GALNT1	ENST00000341156	human	ensembl	74_37	-1	known	frame_shift_del	c.263	p.G88fs	0.099	pirsf_GM2_synthase	pfam_Glyco_trans_2,pirsf_GM2_synthase	-	no_errors	B4GALNT1	HGNC	ENSG00000135454	tier1			43	0	0.00	27	8	22.86
B4GALNT1	0	genome.wustl.edu	37	12	58025802	58025802	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	58025802	58025802	C	T	SNP	B4GALNT1	ENST00000341156	human	ensembl	74_37	-1	known	silent	c.114	p.A38	0.367	pirsf_GM2_synthase	pfam_Glyco_trans_2,pirsf_GM2_synthase	-	no_errors	B4GALNT1	HGNC	ENSG00000135454	tier1	-	-	42	0	0.00	17	13	43.33
B4GALNT4	0	genome.wustl.edu	37	11	380921	380921	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	380921	380921	G	-	DEL	B4GALNT4	ENST00000329962	human	ensembl	74_37	+1	known	frame_shift_del	c.2966	p.G991fs	1.000	pfam_Chond_GalNAc	pfam_Chond_GalNAc,pfam_PA14,smart_PA14	-	no_errors	B4GALNT4	HGNC	ENSG00000182272	tier1			58	0	0.00	25	21	45.65
B4GALT2	0	genome.wustl.edu	37	1	44451262	44451262	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	44451262	44451262	C	T	SNP	B4GALT2	ENST00000309519	human	ensembl	74_37	+1	known	missense	c.1024	p.R342C	1.000	pfam_Galactosyl_T_C	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT2	HGNC	ENSG00000117411				15	0	0.00	6	3	33.33
B9D1	0	genome.wustl.edu	37	17	19261171	19261171	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	19261171	19261171	T	-	DEL	B9D1	ENST00000261499	human	ensembl	74_37	-1	known	frame_shift_del	c.226	p.S76fs	1.000	pfam_B9_dom	pfam_B9_dom	-	no_errors	B9D1	HGNC	ENSG00000108641	tier1			49	0	0.00	20	15	42.86
BAHCC1	0	genome.wustl.edu	37	17	79409064	79409064	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	79409064	79409064	G	A	SNP	BAHCC1	ENST00000307745	human	ensembl	74_37	+1	known	missense	c.689	p.G230D	0.893	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	RP11-1055B8.7	Clone_based_vega_gene	ENSG00000171282	tier1	-	-	39	0	0.00	14	12	46.15
BAHCC1	0	genome.wustl.edu	37	17	79410506	79410506	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	79410506	79410506	C	T	SNP	BAHCC1	ENST00000307745	human	ensembl	74_37	+1	known	missense	c.2131	p.R711W	1.000	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	RP11-1055B8.7	Clone_based_vega_gene	ENSG00000171282				22	0	0.00	16	7	30.43
BAI1	0	genome.wustl.edu	37	8	143603442	143603442	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	143603442	143603442	C	T	SNP	BAI1	ENST00000323289	human	ensembl	74_37	+1	known	silent	c.3141	p.R1047	1.000	pfam_GPCR_2_secretin-like,prints_GPCR_2_brain-spec_angio_inhib,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_Thrombospondin_1_rpt,pfam_DUF3497,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	BAI1	HGNC	ENSG00000181790	tier1	-	-	59	0	0.00	40	16	28.57
BAI2	0	genome.wustl.edu	37	1	32200983	32200984	+	RNA	DEL	GA	GA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	32200983	32200984	GA	-	DEL	BAI2	ENST00000465256	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.643:0.996	-	-	-	no_errors	BAI2	HGNC	ENSG00000121753	tier1			33	0	0.00	10	7	41.18
BAI2	0	genome.wustl.edu	37	1	32201935	32201935	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	32201935	32201935	C	T	SNP	BAI2	ENST00000373658	human	ensembl	74_37	-1	known	missense	c.3187	p.G1063S	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI2	HGNC	ENSG00000121753	tier1	-	-	65	0	0.00	18	31	62.00
BAI2	0	genome.wustl.edu	37	1	32221807	32221807	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	32221807	32221807	C	T	SNP	BAI2	ENST00000373658	human	ensembl	74_37	-1	known	missense	c.631	p.A211T	0.100	NULL	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI2	HGNC	ENSG00000121753	tier1	-	-	21	0	0.00	12	8	40.00
BAIAP2	0	genome.wustl.edu	37	17	79077331	79077331	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	79077331	79077331	G	A	SNP	BAIAP2	ENST00000321300	human	ensembl	74_37	+1	known	silent	c.672	p.P224	0.001	pfam_IRSp53/MIM_homology_IMD	pfam_IRSp53/MIM_homology_IMD,pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	BAIAP2	HGNC	ENSG00000175866	tier1	-	-	16	0	0.00	7	5	41.67
BAIAP2-AS1	0	genome.wustl.edu	37	17	79006821	79006821	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	79006821	79006821	G	A	SNP	BAIAP2-AS1	ENST00000573167	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	BAIAP2-AS1	HGNC	ENSG00000226137	tier1	-	-	69	0	0.00	30	12	28.57
BATF	0	genome.wustl.edu	37	14	76012833	76012833	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	76012833	76012833	C	T	SNP	BATF	ENST00000286639	human	ensembl	74_37	+1	known	missense	c.197	p.A66V	1.000	pfam_bZIP,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	-	no_errors	BATF	HGNC	ENSG00000156127	tier1	-	-	49	0	0.00	16	13	43.33
BAX	0	genome.wustl.edu	37	19	49458971	49458971	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	49458971	49458971	G	-	DEL	BAX	ENST00000293288	human	ensembl	74_37	+1	known	frame_shift_del	c.114	p.E41fs	0.588	NULL	pfam_Blc2_fam,pfscan_Bcl2-like,prints_Blc2_fam	-	no_errors	BAX	HGNC	ENSG00000087088	tier1			79	0	0.00	52	18	25.71
BAZ2A	0	genome.wustl.edu	37	12	56992712	56992712	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	56992712	56992712	C	T	SNP	BAZ2A	ENST00000551812	human	ensembl	74_37	-1	known	missense	c.5492	p.R1831Q	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_dom,superfamily_Znf_FYVE_PHD,smart_Methyl_CpG_DNA-bd,smart_AT_hook_DNA-bd_motif,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2A	HGNC	ENSG00000076108	tier1	-	-	30	0	0.00	9	10	52.63
BAZ2A	0	genome.wustl.edu	37	12	56995512	56995512	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	56995512	56995512	G	T	SNP	BAZ2A	ENST00000551812	human	ensembl	74_37	-1	known	missense	c.3895	p.P1299T	0.471	NULL	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_dom,superfamily_Znf_FYVE_PHD,smart_Methyl_CpG_DNA-bd,smart_AT_hook_DNA-bd_motif,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2A	HGNC	ENSG00000076108	tier1	-	-	38	0	0.00	17	22	56.41
BAZ2A	0	genome.wustl.edu	37	12	57000030	57000030	+	Splice_Site	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	57000030	57000030	C	T	SNP	BAZ2A	ENST00000551812	human	ensembl	74_37	-1	known	splice_site	c.2265+1	e12+1	1.000	-	-	-	no_errors	BAZ2A	HGNC	ENSG00000076108	tier1	-	-	187	0	0.00	129	62	32.46
BBS10	0	genome.wustl.edu	37	12	76741019	76741019	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	76741019	76741019	C	T	SNP	BBS10	ENST00000393262	human	ensembl	74_37	-1	known	missense	c.746	p.R249H	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom	-	no_errors	BBS10	HGNC	ENSG00000179941	tier1	-	-	34	0	0.00	22	12	35.29
BBS9	0	genome.wustl.edu	37	7	33296864	33296864	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	33296864	33296864	C	T	SNP	BBS9	ENST00000242067	human	ensembl	74_37	+1	known	silent	c.459	p.C153	0.998	NULL	NULL	-	no_errors	BBS9	HGNC	ENSG00000122507	tier1	-	-	52	0	0.00	36	4	10.00
BCAP29	0	genome.wustl.edu	37	7	107221266	107221266	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	107221266	107221266	G	T	SNP	BCAP29	ENST00000379119	human	ensembl	74_37	+1	known	nonsense	c.49	p.G17*	1.000	pfam_Bap31	pfam_Bap31	-	no_errors	BCAP29	HGNC	ENSG00000075790	tier1	-	-	33	0	0.00	28	20	41.67
BCHE	0	genome.wustl.edu	37	3	165547749	165547749	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	165547749	165547749	A	-	DEL	BCHE	ENST00000264381	human	ensembl	74_37	-1	known	frame_shift_del	c.1073	p.L358fs	0.998	pfam_CarbesteraseB,prints_Cholinesterase	pfam_CarbesteraseB,pfam_AChE_tetra,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	BCHE	HGNC	ENSG00000114200	tier1			36	0	0.00	37	24	39.34
BCL2L2	0	genome.wustl.edu	37	14	23778157	23778157	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	23778157	23778157	T	-	DEL	BCL2L2	ENST00000250405	human	ensembl	74_37	+1	known	frame_shift_del	c.565	p.F190fs	1.000	NULL	pfam_Blc2_fam,pfam_Bcl2_BH4,smart_Bcl2_BH4,pfscan_Bcl2-like,pfscan_Bcl2_BH4,prints_Apop_reg_BclW,prints_Blc2_fam	-	no_errors	BCL2L2	HGNC	ENSG00000129473	tier1			34	0	0.00	13	6	31.58
BCL9L	0	genome.wustl.edu	37	11	118768995	118768995	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	118768995	118768995	C	A	SNP	BCL9L	ENST00000526143	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	BCL9L	HGNC	ENSG00000186174	tier1	-	-	21	0	0.00	10	5	33.33
BCORL1	0	genome.wustl.edu	37	X	129149744	129149744	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	129149744	129149744	C	-	DEL	BCORL1	ENST00000303743	human	ensembl	74_37	+1	known	frame_shift_del	c.2996	p.Q1001fs	0.986	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	BCORL1	HGNC	ENSG00000085185	tier1			53	0	0.00	9	16	64.00
BDH2	0	genome.wustl.edu	37	4	104016363	104016363	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	104016363	104016363	G	T	SNP	BDH2	ENST00000296424	human	ensembl	74_37	-1	known	missense	c.148	p.P50T	0.698	pfam_DH_sc/Rdtase_SDR	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DHB_DH,prints_DH_sc/Rdtase_SDR,prints_ADH_insect	-	no_errors	BDH2	HGNC	ENSG00000164039	tier1	-	-	70	0	0.00	60	4	6.25
BDNF	0	genome.wustl.edu	37	11	27679080	27679081	+	RNA	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	27679080	27679081	-	T	INS	BDNF	ENST00000584049	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.395:1.000	-	-	-	no_errors	BDNF	HGNC	ENSG00000176697	tier1			15	0	0.00	6	6	50.00
BDP1	0	genome.wustl.edu	37	5	70766232	70766233	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	70766232	70766233	-	T	INS	BDP1	ENST00000358731	human	ensembl	74_37	+1	known	frame_shift_ins	c.930_931	p.L312fs	1.000:1.000	superfamily_Homeodomain-like,smart_SANT/Myb	superfamily_Homeodomain-like,smart_SANT/Myb	-	no_errors	BDP1	HGNC	ENSG00000145734	tier1			32	0	0.00	30	16	34.78
BEND3	0	genome.wustl.edu	37	6	107391188	107391188	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	107391188	107391188	C	T	SNP	BEND3	ENST00000369042	human	ensembl	74_37	-1	known	missense	c.1207	p.E403K	1.000	NULL	pfam_BEN_domain	-	no_errors	BEND3	HGNC	ENSG00000178409	tier1	-	-	26	0	0.00	20	13	39.39
BEND3	0	genome.wustl.edu	37	6	107391210	107391210	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	107391210	107391210	C	A	SNP	BEND3	ENST00000369042	human	ensembl	74_37	-1	known	missense	c.1185	p.Q395H	1.000	NULL	pfam_BEN_domain	-	no_errors	BEND3	HGNC	ENSG00000178409	tier1	-	-	34	0	0.00	14	14	50.00
BEND7	0	genome.wustl.edu	37	10	13568140	13568140	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	13568140	13568140	A	-	DEL	BEND7	ENST00000396900	human	ensembl	74_37	-1	known	frame_shift_del	c.143	p.L48fs	1.000	NULL	pfam_BEN_domain	-	no_errors	BEND7	HGNC	ENSG00000165626	tier1			59	0	0.00	53	21	28.38
BEST3	0	genome.wustl.edu	37	12	70049362	70049362	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	70049362	70049362	G	-	DEL	BEST3	ENST00000330891	human	ensembl	74_37	-1	known	frame_shift_del	c.1332	p.R445fs	0.001	NULL	pfam_Bestrophin/UPF0187	-	no_errors	BEST3	HGNC	ENSG00000127325	tier1			95	0	0.00	49	26	34.67
BHLHA15	0	genome.wustl.edu	37	7	97841874	97841874	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	97841874	97841874	C	A	SNP	BHLHA15	ENST00000314018	human	ensembl	74_37	+1	known	silent	c.253	p.R85	0.995	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	BHLHA15	HGNC	ENSG00000180535	tier1	-	-	20	0	0.00	7	7	50.00
BICD1	0	genome.wustl.edu	37	12	32491758	32491758	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	32491758	32491758	G	T	SNP	BICD1	ENST00000281474	human	ensembl	74_37	+1	known	missense	c.2609	p.R870M	1.000	NULL	pfam_Bicaudal-D_microtubule-assoc,superfamily_SPOC_like_C_dom	-	no_errors	BICD1	HGNC	ENSG00000151746	tier1	-	-	46	0	0.00	77	5	6.10
BICD2	0	genome.wustl.edu	37	9	95481635	95481635	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	95481635	95481635	C	A	SNP	BICD2	ENST00000356884	human	ensembl	74_37	-1	known	missense	c.1292	p.G431V	1.000	pfam_Bicaudal-D_microtubule-assoc	pfam_Bicaudal-D_microtubule-assoc	-	no_errors	BICD2	HGNC	ENSG00000185963	tier1	-	-	92	0	0.00	35	33	48.53
BIRC6	0	genome.wustl.edu	37	2	32626374	32626374	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	32626374	32626374	C	T	SNP	BIRC6	ENST00000421745	human	ensembl	74_37	+1	known	missense	c.1178	p.S393L	0.994	superfamily_WD40_repeat_dom	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760	tier1	-	-	109	0	0.00	52	40	43.48
BIRC6	0	genome.wustl.edu	37	2	32740485	32740485	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	32740485	32740485	G	A	SNP	BIRC6	ENST00000421745	human	ensembl	74_37	+1	known	missense	c.10997	p.R3666H	1.000	NULL	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760	tier1	-	-	79	0	0.00	52	32	37.65
BLK	0	genome.wustl.edu	37	8	11412845	11412845	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	11412845	11412845	G	-	DEL	BLK	ENST00000259089	human	ensembl	74_37	+1	known	frame_shift_del	c.624	p.D210fs	0.569	smart_SH2,pfscan_SH2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	BLK	HGNC	ENSG00000136573	tier1			36	0	0.00	22	10	31.25
BLNK	0	genome.wustl.edu	37	10	97969609	97969609	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	97969609	97969609	G	A	SNP	BLNK	ENST00000224337	human	ensembl	74_37	-1	known	missense	c.731	p.P244L	1.000	NULL	pfam_SH2,smart_SH2,pfscan_SH2	-	no_errors	BLNK	HGNC	ENSG00000095585	tier1	-	-	67	0	0.00	30	14	31.82
BMI1	0	genome.wustl.edu	37	10	22615824	22615824	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	22615824	22615824	A	-	DEL	BMI1	ENST00000376663	human	ensembl	74_37	+1	known	frame_shift_del	c.118	p.T41fs	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	BMI1	HGNC	ENSG00000168283	tier1			66	0	0.00	49	28	36.36
BMP2	0	genome.wustl.edu	37	20	6751098	6751098	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	6751098	6751098	G	A	SNP	BMP2	ENST00000378827	human	ensembl	74_37	+1	known	missense	c.325	p.V109M	1.000	pfam_TGF-b_N	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	BMP2	HGNC	ENSG00000125845	tier1	-	-	50	0	0.00	35	20	36.36
BMPR2	0	genome.wustl.edu	37	2	203420804	203420804	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	203420804	203420804	A	G	SNP	BMPR2	ENST00000374580	human	ensembl	74_37	+1	known	missense	c.2416	p.M806V	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BMPR2	HGNC	ENSG00000204217	tier1	-	-	61	0	0.00	28	21	42.86
BMS1P20	0	genome.wustl.edu	37	22	22661547	22661547	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	22661547	22661547	G	T	SNP	BMS1P20	ENST00000426066	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	BMS1P20	HGNC	ENSG00000236850	tier1	-	-	362	0	0.00	202	91	31.06
BMS1P5	0	genome.wustl.edu	37	10	48930118	48930118	+	RNA	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	48930118	48930118	T	C	SNP	BMS1P5	ENST00000449800	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	BMS1P5	HGNC	ENSG00000204164	tier1	-	-	50	0	0.00	62	15	19.48
BNC1	0	genome.wustl.edu	37	15	83932172	83932172	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	83932172	83932172	G	T	SNP	BNC1	ENST00000345382	human	ensembl	74_37	-1	known	missense	c.1831	p.R611S	0.001	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC1	HGNC	ENSG00000169594				71	0	0.00	56	3	5.08
BRCA2	0	genome.wustl.edu	37	13	32899266	32899266	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	32899266	32899266	A	G	SNP	BRCA2	ENST00000380152	human	ensembl	74_37	+1	known	missense	c.370	p.M124V	0.000	pirsf_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold,pirsf_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618	tier1	-	-	79	0	0.00	48	66	57.89
BRD1	0	genome.wustl.edu	37	22	50181346	50181346	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	50181346	50181346	C	T	SNP	BRD1	ENST00000457780	human	ensembl	74_37	-1	known	missense	c.2549	p.R850H	1.000	NULL	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD1	HGNC	ENSG00000100425	tier1	-	-	43	0	0.00	12	17	58.62
BRD3	0	genome.wustl.edu	37	9	136915646	136915646	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	136915646	136915646	G	-	DEL	BRD3	ENST00000303407	human	ensembl	74_37	-1	known	frame_shift_del	c.564	p.T189fs	0.954	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	BRD3	HGNC	ENSG00000169925	tier1			58	0	0.00	33	16	32.65
BRD4	0	genome.wustl.edu	37	19	15376314	15376314	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	15376314	15376314	C	T	SNP	BRD4	ENST00000263377	human	ensembl	74_37	-1	known	missense	c.700	p.V234I	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD4	HGNC	ENSG00000141867	tier1	-	-	100	0	0.00	43	31	41.89
BRSK2	0	genome.wustl.edu	37	11	1475821	1475821	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	1475821	1475821	G	A	SNP	BRSK2	ENST00000382179	human	ensembl	74_37	+1	known	missense	c.1789	p.V597M	0.978	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BRSK2	HGNC	ENSG00000174672	tier1	-	-	53	0	0.00	25	12	32.43
BRWD1	0	genome.wustl.edu	37	21	40558989	40558989	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	40558989	40558989	A	-	DEL	BRWD1	ENST00000333229	human	ensembl	74_37	-1	known	frame_shift_del	c.6926	p.L2309fs	0.001	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_WD40_repeat_dom,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	BRWD1	HGNC	ENSG00000185658	tier1			46	0	0.00	24	15	38.46
BSN	0	genome.wustl.edu	37	3	49691163	49691163	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	49691163	49691163	G	T	SNP	BSN	ENST00000296452	human	ensembl	74_37	+1	known	missense	c.4174	p.G1392W	0.006	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061	tier1	-	-	66	0	0.00	51	4	7.27
BTBD17	0	genome.wustl.edu	37	17	72353398	72353398	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	72353398	72353398	C	T	SNP	BTBD17	ENST00000375366	human	ensembl	74_37	-1	known	missense	c.835	p.G279S	0.991	NULL	pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD17	HGNC	ENSG00000204347				12	0	0.00	4	3	42.86
BTBD18	0	genome.wustl.edu	37	11	57512577	57512577	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	57512577	57512577	C	T	SNP	BTBD18	ENST00000422652	human	ensembl	74_37	-1	known	missense	c.1168	p.G390R	0.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	BTBD18	HGNC	ENSG00000233436				42	0	0.00	32	7	17.95
BTF3L4	0	genome.wustl.edu	37	1	52530571	52530571	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	52530571	52530571	A	-	DEL	BTF3L4	ENST00000313334	human	ensembl	74_37	+1	known	frame_shift_del	c.129	p.K45fs	0.252	pfam_Nas_poly-pep-assoc_cplx_dom,pfscan_Nas_poly-pep-assoc_cplx_dom	pfam_Nas_poly-pep-assoc_cplx_dom,pfscan_Nas_poly-pep-assoc_cplx_dom	-	no_errors	BTF3L4	HGNC	ENSG00000134717	tier1			56	0	0.00	48	27	36.00
BZRAP1-AS1	0	genome.wustl.edu	37	17	56431059	56431059	+	RNA	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	56431059	56431059	A	T	SNP	BZRAP1-AS1	ENST00000578025	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	BZRAP1-AS1	HGNC	ENSG00000265148	tier1	-	-	29	0	0.00	17	3	15.00
C10orf137	0	genome.wustl.edu	37	10	127409791	127409791	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	127409791	127409791	G	T	SNP	C10orf137	ENST00000356792	human	ensembl	74_37	+1	known	nonsense	c.127	p.G43*	1.000	NULL	NULL	-	no_errors	C10orf137	HGNC	ENSG00000107938	tier1	-	-	60	0	0.00	56	4	6.67
C10orf35	0	genome.wustl.edu	37	10	71391530	71391530	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	71391530	71391530	G	A	SNP	C10orf35	ENST00000373279	human	ensembl	74_37	+1	known	missense	c.31	p.V11M	0.993	NULL	NULL	-	no_errors	C10orf35	HGNC	ENSG00000171224	tier1	-	-	78	0	0.00	39	21	35.00
C10orf67	0	genome.wustl.edu	37	10	23611349	23611349	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	23611349	23611349	G	A	SNP	C10orf67	ENST00000323327	human	ensembl	74_37	-1	known	silent	c.448	p.L150	0.000	NULL	NULL	-	no_errors	C10orf67	HGNC	ENSG00000179133	tier1	-	-	46	0	0.00	33	11	25.00
C10orf68	0	genome.wustl.edu	37	10	33137552	33137552	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	33137552	33137552	G	A	SNP	C10orf68	ENST00000375025	human	ensembl	74_37	+1	known	missense	c.1722	p.M574I	0.000	NULL	NULL	-	no_errors	C10orf68	HGNC	ENSG00000150076	tier1	-	-	28	0	0.00	17	12	41.38
C10orf76	0	genome.wustl.edu	37	10	103771512	103771512	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	103771512	103771512	G	T	SNP	C10orf76	ENST00000370033	human	ensembl	74_37	-1	known	missense	c.799	p.Q267K	1.000	superfamily_ARM-type_fold	pfam_DUF1741,superfamily_ARM-type_fold	-	no_errors	C10orf76	HGNC	ENSG00000120029	tier1	-	-	42	0	0.00	39	8	17.02
C10orf88	0	genome.wustl.edu	37	10	124711510	124711510	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	124711510	124711510	T	-	DEL	C10orf88	ENST00000481909	human	ensembl	74_37	-1	known	frame_shift_del	c.401	p.N134fs	0.704	NULL	NULL	-	no_errors	C10orf88	HGNC	ENSG00000119965	tier1			32	0	0.00	30	15	33.33
C12orf43	0	genome.wustl.edu	37	12	121442025	121442025	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	121442025	121442025	C	A	SNP	C12orf43	ENST00000288757	human	ensembl	74_37	-1	known	missense	c.720	p.K240N	0.053	NULL	NULL	-	no_errors	C12orf43	HGNC	ENSG00000157895	tier1	-	-	154	0	0.00	90	41	31.30
C12orf54	0	genome.wustl.edu	37	12	48882265	48882265	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	48882265	48882265	A	-	DEL	C12orf54	ENST00000548913	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.084	-	-	-	no_errors	C12orf54	HGNC	ENSG00000177627	tier1			12	0	0.00	7	8	53.33
C12orf55	0	genome.wustl.edu	37	12	96912781	96912781	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	96912781	96912781	T	C	SNP	C12orf55	ENST00000524981	human	ensembl	74_37	+1	putative	missense	c.874	p.W292R	0.988	NULL	superfamily_Fibronectin_type3	-	no_errors	C12orf55	HGNC	ENSG00000188596	tier1	-	-	102	0	0.00	79	48	37.50
C12orf55	0	genome.wustl.edu	37	12	97024359	97024359	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	97024359	97024359	A	-	DEL	C12orf55	ENST00000524981	human	ensembl	74_37	+1	putative	frame_shift_del	c.4246	p.K1418fs	0.001	NULL	superfamily_Fibronectin_type3	-	no_errors	C12orf55	HGNC	ENSG00000188596	tier1			49	0	0.00	45	19	29.69
C12orf66	0	genome.wustl.edu	37	12	64587767	64587767	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	64587767	64587767	G	A	SNP	C12orf66	ENST00000398055	human	ensembl	74_37	-1	known	missense	c.1193	p.P398L	1.000	pfam_DUF2003	pfam_DUF2003	-	no_errors	C12orf66	HGNC	ENSG00000174206	tier1	-	-	64	0	0.00	33	27	45.00
C12orf66	0	genome.wustl.edu	37	12	64615932	64615932	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	64615932	64615932	G	T	SNP	C12orf66	ENST00000398055	human	ensembl	74_37	-1	known	missense	c.86	p.S29Y	1.000	pfam_DUF2003	pfam_DUF2003	-	no_errors	C12orf66	HGNC	ENSG00000174206	tier1	-	-	61	0	0.00	52	4	7.14
C12orf68	0	genome.wustl.edu	37	12	48578460	48578460	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	48578460	48578460	G	T	SNP	C12orf68	ENST00000316554	human	ensembl	74_37	+1	known	silent	c.555	p.L185	1.000	NULL	NULL	-	no_errors	C12orf68	HGNC	ENSG00000177875	tier1	-	-	47	0	0.00	44	4	8.33
C12orf68	0	genome.wustl.edu	37	12	48578355	48578355	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	48578355	48578355	C	T	SNP	C12orf68	ENST00000316554	human	ensembl	74_37	+1	known	silent	c.450	p.P150	0.941	NULL	NULL	-	no_errors	C12orf68	HGNC	ENSG00000177875				29	0	0.00	39	3	7.14
C14orf169	0	genome.wustl.edu	37	14	73959974	73959974	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	73959974	73959974	T	-	DEL	C14orf169	ENST00000531973	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.897	-	-	-	no_errors	C14orf169	HGNC	ENSG00000255242	tier1			39	0	0.00	19	7	26.92
C15orf39	0	genome.wustl.edu	37	15	75499804	75499804	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	75499804	75499804	C	-	DEL	C15orf39	ENST00000360639	human	ensembl	74_37	+1	known	frame_shift_del	c.1415	p.P474fs	0.848	NULL	NULL	-	no_errors	C15orf39	HGNC	ENSG00000167173	tier1			88	0	0.00	35	31	46.97
C16orf82	0	genome.wustl.edu	37	16	27080038	27080041	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	27080038	27080041	TTTT	-	DEL	C16orf82	ENST00000418886	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.004:0.008	-	-	-	no_errors	C16orf82	HGNC	ENSG00000234186	tier1			13	0	0.00	0	5	100.00
C16orf86	0	genome.wustl.edu	37	16	67700903	67700903	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	67700903	67700903	G	A	SNP	C16orf86	ENST00000403458	human	ensembl	74_37	+1	known	silent	c.30	p.P10	0.001	NULL	NULL	-	no_errors	C16orf86	HGNC	ENSG00000159761	tier1	-	-	41	0	0.00	7	18	72.00
C16orf93	0	genome.wustl.edu	37	16	30772913	30772913	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	30772913	30772913	C	T	SNP	C16orf93	ENST00000543610	human	ensembl	74_37	-1	known	missense	c.157	p.A53T	0.000	NULL	NULL	-	no_errors	C16orf93	HGNC	ENSG00000196118	tier1	-	-	109	0	0.00	51	37	42.05
C17orf107	0	genome.wustl.edu	37	17	4803728	4803728	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	4803728	4803728	G	A	SNP	C17orf107	ENST00000381365	human	ensembl	74_37	+1	known	missense	c.473	p.R158Q	0.012	NULL	NULL	-	no_errors	C17orf107	HGNC	ENSG00000205710	tier1	-	-	70	0	0.00	32	21	39.62
C17orf72	0	genome.wustl.edu	37	17	62078849	62078849	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	62078849	62078849	C	-	DEL	C17orf72	ENST00000412177	human	ensembl	74_37	+1	known	frame_shift_del	c.493	p.S167fs	1.000	NULL	NULL	-	no_errors	C17orf72	HGNC	ENSG00000224383	tier1			52	0	0.00	24	20	45.45
C17orf77	0	genome.wustl.edu	37	17	72588242	72588242	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	72588242	72588242	G	A	SNP	C17orf77	ENST00000328023	human	ensembl	74_37	+1	known	silent	c.57	p.A19	0.000	NULL	NULL	-	no_errors	C17orf77	HGNC	ENSG00000182352	tier1	rs143787635	-	38	0	0.00	37	21	36.21
C19orf25	0	genome.wustl.edu	37	19	1474829	1474829	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	1474829	1474829	C	T	SNP	C19orf25	ENST00000588871	human	ensembl	74_37	-1	putative	silent	c.468	p.P156	0.002	NULL	NULL	-	no_errors	C19orf25	HGNC	ENSG00000119559	tier1	-	-	54	0	0.00	44	19	30.16
C19orf38	0	genome.wustl.edu	37	19	10961063	10961063	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	10961063	10961063	G	-	DEL	C19orf38	ENST00000397820	human	ensembl	74_37	+1	known	frame_shift_del	c.160	p.Q56fs	0.009	NULL	NULL	-	no_errors	C19orf38	HGNC	ENSG00000214212	tier1			102	0	0.00	24	18	42.86
C19orf48	0	genome.wustl.edu	37	19	51301954	51301954	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	51301954	51301954	G	T	SNP	C19orf48	ENST00000595794	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.212	-	-	-	no_errors	C19orf48	HGNC	ENSG00000167747	tier1	-	-	102	0	0.00	60	4	6.25
C1orf109	0	genome.wustl.edu	37	1	38155688	38155688	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	38155688	38155688	T	-	DEL	C1orf109	ENST00000472584	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	C1orf109	HGNC	ENSG00000116922	tier1			15	0	0.00	7	4	36.36
C1orf132	0	genome.wustl.edu	37	1	207975272	207975272	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	207975272	207975272	C	A	SNP	C1orf132	ENST00000385231	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	C1orf132	HGNC	ENSG00000203709	tier1	-	-	32	0	0.00	17	11	39.29
C1orf145	0	genome.wustl.edu	37	1	228400554	228400554	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	228400554	228400554	C	T	SNP	C1orf145	ENST00000337335	human	ensembl	74_37	-1	known	silent	c.294	p.T98	0.000	NULL	NULL	-	no_errors	C1orf145	HGNC	ENSG00000162913	tier1	-	-	78	0	0.00	56	26	31.71
C1orf167	0	genome.wustl.edu	37	1	11826586	11826586	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	11826586	11826586	C	T	SNP	C1orf167	ENST00000433342	human	ensembl	74_37	+1	known	missense	c.1313	p.A438V	0.017	NULL	NULL	-	no_errors	C1orf167	HGNC	ENSG00000215910	tier1	-	-	25	0	0.00	9	10	52.63
C1orf185	0	genome.wustl.edu	37	1	51613179	51613179	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	51613179	51613179	A	-	DEL	C1orf185	ENST00000371759	human	ensembl	74_37	+1	known	frame_shift_del	c.336	p.N114fs	0.029	NULL	NULL	-	no_errors	C1orf185	HGNC	ENSG00000204006	tier1			50	0	0.00	35	31	46.97
C1orf185	0	genome.wustl.edu	37	1	51613355	51613355	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	51613355	51613355	G	T	SNP	C1orf185	ENST00000371759	human	ensembl	74_37	+1	known	missense	c.512	p.G171V	0.002	NULL	NULL	-	no_errors	C1orf185	HGNC	ENSG00000204006	tier1	-	-	64	0	0.00	64	4	5.88
C1orf63	0	genome.wustl.edu	37	1	25571794	25571795	+	Splice_Site	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	25571794	25571795	-	A	INS	C1orf63	ENST00000417642	human	ensembl	74_37	-1	known	splice_site_ins	c.500-3_500-2	e2-2	0.972:0.056	-	-	-	no_errors	C1orf63	HGNC	ENSG00000117616	tier1			16	0	0.00	25	5	16.67
C1orf86	0	genome.wustl.edu	37	1	2116003	2116005	+	RNA	DEL	CTC	CTC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	2116003	2116005	CTC	-	DEL	C1orf86	ENST00000469733	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	C1orf86	HGNC	ENSG00000162585	tier1			48	0	0.00	17	7	29.17
C20orf112	0	genome.wustl.edu	37	20	31041556	31041556	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	31041556	31041556	G	-	DEL	C20orf112	ENST00000359676	human	ensembl	74_37	-1	known	frame_shift_del	c.396	p.Y133fs	0.034	NULL	NULL	-	no_errors	C20orf112	HGNC	ENSG00000197183	tier1			45	0	0.00	24	13	35.14
C20orf26	0	genome.wustl.edu	37	20	20147072	20147073	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	20147072	20147073	-	T	INS	C20orf26	ENST00000245957	human	ensembl	74_37	+1	known	frame_shift_ins	c.1237_1238	p.S415fs	1.000:1.000	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	C20orf26	HGNC	ENSG00000089101	tier1			112	0	0.00	79	48	37.80
C21orf2	0	genome.wustl.edu	37	21	45758217	45758217	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	45758217	45758217	G	A	SNP	C21orf2	ENST00000496321	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C21orf2	HGNC	ENSG00000160226	tier1	-	-	38	0	0.00	7	15	68.18
C2CD3	0	genome.wustl.edu	37	11	73804962	73804963	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	73804962	73804963	GA	-	DEL	C2CD3	ENST00000334126	human	ensembl	74_37	-1	known	frame_shift_del	c.3243_3242	p.L1081fs	0.812:1.000	smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	C2CD3	HGNC	ENSG00000168014	tier1			59	0	0.00	35	16	31.37
C2orf42	0	genome.wustl.edu	37	2	70392682	70392682	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	70392682	70392682	T	0	DEL	C2orf42	ENST00000264434	human	ensembl	74_37	-1	known	frame_shift_del	c.1230	p.K410fs	1.000	NULL	NULL	-	no_errors	C2orf42	HGNC	ENSG00000115998				55	0	0.00	47	7	12.96
C2orf71	0	genome.wustl.edu	37	2	29294162	29294162	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	29294162	29294162	G	-	DEL	C2orf71	ENST00000331664	human	ensembl	74_37	-1	known	frame_shift_del	c.2966	p.P989fs	0.000	NULL	NULL	-	no_errors	C2orf71	HGNC	ENSG00000179270	tier1			84	0	0.00	55	23	29.49
C3	0	genome.wustl.edu	37	19	6694571	6694571	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	6694571	6694571	C	A	SNP	C3	ENST00000245907	human	ensembl	74_37	-1	known	missense	c.3025	p.G1009C	1.000	pfam_MacrogloblnA2_thiol-ester-bond,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_A2M_comp,pfam_A-macroglobulin_rcpt-bd,pfam_Macroglobln_a2,pfam_Netrin_module_non-TIMP,pfam_A2M_N_2,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_TIMP-like_OB-fold,superfamily_A-macroglobulin_rcpt-bd,superfamily_Anaphylatoxin_comp_syst,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,prints_Anaphylatoxn_comp_syst_dom,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain	-	no_errors	C3	HGNC	ENSG00000125730	tier1	-	-	36	0	0.00	24	24	50.00
C3	0	genome.wustl.edu	37	19	6697481	6697481	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	6697481	6697481	G	-	DEL	C3	ENST00000245907	human	ensembl	74_37	-1	known	frame_shift_del	c.2670	p.K891fs	0.014	NULL	pfam_A2M_comp,pfam_A-macroglobulin_rcpt-bd,pfam_Macroglobln_a2,pfam_Netrin_module_non-TIMP,pfam_A2M_N_2,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_TIMP-like_OB-fold,superfamily_A-macroglobulin_rcpt-bd,superfamily_Anaphylatoxin_comp_syst,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,prints_Anaphylatoxn_comp_syst_dom,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain	-	no_errors	C3	HGNC	ENSG00000125730	tier1			80	0	0.00	61	36	37.11
C3orf20	0	genome.wustl.edu	37	3	14770040	14770040	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	14770040	14770040	G	T	SNP	C3orf20	ENST00000253697	human	ensembl	74_37	+1	known	missense	c.1785	p.K595N	0.000	NULL	NULL	-	no_errors	C3orf20	HGNC	ENSG00000131379	tier1	-	-	91	0	0.00	68	4	5.56
C3orf65	0	genome.wustl.edu	37	3	185434550	185434550	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	185434550	185434550	G	A	SNP	C3orf65	ENST00000296270	human	ensembl	74_37	+1	known	missense	c.383	p.G128E	0.000	NULL	NULL	-	no_errors	C3orf65	HGNC	ENSG00000163915	tier1	-	-	67	0	0.00	31	13	29.55
C4BPB	0	genome.wustl.edu	37	1	207268778	207268778	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	207268778	207268778	C	T	SNP	C4BPB	ENST00000451804	human	ensembl	74_37	+1	known	silent	c.522	p.S174	0.004	NULL	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	C4BPB	HGNC	ENSG00000123843				12	0	0.00	10	3	23.08
C4orf50	0	genome.wustl.edu	37	4	5982016	5982016	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	5982016	5982016	G	A	SNP	C4orf50	ENST00000531445	human	ensembl	74_37	-1	known	missense	c.1475	p.A492V	0.000	NULL	NULL	-	no_errors	C4orf50	HGNC	ENSG00000181215	tier1	-	-	55	0	0.00	36	20	35.71
C5AR1	0	genome.wustl.edu	37	19	47824042	47824042	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	47824042	47824042	G	A	SNP	C5AR1	ENST00000355085	human	ensembl	74_37	+1	known	silent	c.1008	p.T336	0.000	prints_Anaphtx_C5AR1/C5AR2	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Anaphtx_C5AR1/C5AR2,prints_GPCR_Rhodpsn,prints_Anphylx_rcpt,prints_Brdyknn_rcpt,prints_Formyl_pep_rcpt	-	no_errors	C5AR1	HGNC	ENSG00000197405	tier1	rs142511245	-	31	0	0.00	9	9	50.00
C6orf141	0	genome.wustl.edu	37	6	49518517	49518517	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	49518517	49518517	T	C	SNP	C6orf141	ENST00000371194	human	ensembl	74_37	+1	known	silent	c.12	p.P4	0.000	NULL	NULL	-	no_errors	C6orf141	HGNC	ENSG00000197261	tier1	-	-	77	0	0.00	43	27	38.57
C6orf165	0	genome.wustl.edu	37	6	88120371	88120371	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	88120371	88120371	G	A	SNP	C6orf165	ENST00000369562	human	ensembl	74_37	+1	known	silent	c.177	p.V59	0.995	NULL	pfam_DUF3508	-	no_errors	C6ORF165	Uniprot_gn	ENSG00000272514	tier1	-	-	67	0	0.00	39	20	33.90
C7orf55-LUC7L2	0	genome.wustl.edu	37	7	139056191	139056191	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	139056191	139056191	G	A	SNP	C7orf55-LUC7L2	ENST00000541170	human	ensembl	74_37	+1	known	missense	c.34	p.G12R	1.000	pfam_Luc7-rel	pfam_Luc7-rel	-	no_errors	C7orf55-LUC7L2	HGNC	ENSG00000146963	tier1	-	-	55	0	0.00	29	24	45.28
C8A	0	genome.wustl.edu	37	1	57378168	57378168	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	57378168	57378168	G	A	SNP	C8A	ENST00000361249	human	ensembl	74_37	+1	known	silent	c.1473	p.L491	0.996	smart_MACPF,prints_MAC_perforin	pfam_MACPF,pfam_LDrepeatLR_classA_rpt,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,pfscan_LDrepeatLR_classA_rpt,pfscan_Thrombospondin_1_rpt,prints_MAC_perforin	-	no_errors	C8A	HGNC	ENSG00000157131	tier1	rs148316319	-	49	0	0.00	27	25	48.08
C8orf31	0	genome.wustl.edu	37	8	144126186	144126186	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	144126186	144126186	C	T	SNP	C8orf31	ENST00000395172	human	ensembl	74_37	+1	known	missense	c.307	p.R103C	0.000	NULL	NULL	-	no_errors	C8orf31	HGNC	ENSG00000177335	tier1	-	-	37	0	0.00	19	12	38.71
C8orf47	0	genome.wustl.edu	37	8	99102178	99102178	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	99102178	99102178	A	G	SNP	C8orf47	ENST00000318528	human	ensembl	74_37	+1	known	silent	c.933	p.P311	0.000	NULL	NULL	-	no_errors	C8orf47	HGNC	ENSG00000177459	tier1	-	-	27	0	0.00	36	13	26.53
C8orf58	0	genome.wustl.edu	37	8	22458526	22458526	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	22458526	22458526	G	T	SNP	C8orf58	ENST00000289989	human	ensembl	74_37	+1	known	nonsense	c.172	p.E58*	0.055	NULL	NULL	-	no_errors	C8orf58	HGNC	ENSG00000241852	tier1	-	-	102	0	0.00	96	33	25.58
C9orf16	0	genome.wustl.edu	37	9	130925726	130925726	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	130925726	130925726	C	T	SNP	C9orf16	ENST00000372994	human	ensembl	74_37	+1	known	silent	c.84	p.Y28	0.993	pfam_UPF0184	pfam_UPF0184	-	no_errors	C9orf16	HGNC	ENSG00000171159	tier1	-	-	47	0	0.00	27	20	42.55
C9orf78	0	genome.wustl.edu	37	9	132595850	132595850	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	132595850	132595850	T	-	DEL	C9orf78	ENST00000461762	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.032	-	-	-	no_errors	C9orf78	HGNC	ENSG00000136819	tier1			60	0	0.00	33	25	43.10
C9orf96	0	genome.wustl.edu	37	9	136259328	136259328	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	136259328	136259328	G	-	DEL	C9orf96	ENST00000462310	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	C9orf96	HGNC	ENSG00000198870	tier1			66	0	0.00	33	14	29.79
CA10	0	genome.wustl.edu	37	17	50008356	50008357	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	50008356	50008357	-	C	INS	CA10	ENST00000340813	human	ensembl	74_37	-1	known	frame_shift_ins	c.291_290	p.R98fs	0.994:1.000	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA10	HGNC	ENSG00000154975	tier1			62	0	0.00	27	28	50.91
CA5BP1	0	genome.wustl.edu	37	X	15721077	15721077	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	15721077	15721077	G	A	SNP	CA5BP1	ENST00000380333	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CA5BP1	HGNC	ENSG00000186312	tier1	-	-	31	0	0.00	2	30	93.75
CACNA1E	0	genome.wustl.edu	37	1	181687262	181687262	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	181687262	181687262	C	T	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	missense	c.1597	p.R533C	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	tier1	-	-	67	0	0.00	99	12	10.81
CACNA1E	0	genome.wustl.edu	37	1	181726119	181726119	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	181726119	181726119	C	T	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	missense	c.4186	p.R1396C	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	tier1	-	-	99	0	0.00	73	33	31.13
CACNA1F	0	genome.wustl.edu	37	X	49087004	49087004	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	49087004	49087004	G	A	SNP	CACNA1F	ENST00000376265	human	ensembl	74_37	-1	known	missense	c.589	p.P197S	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1F	HGNC	ENSG00000102001	tier1	-	-	37	0	0.00	3	29	90.62
CACNA1H	0	genome.wustl.edu	37	16	1245456	1245456	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	1245456	1245456	T	-	DEL	CACNA1H	ENST00000348261	human	ensembl	74_37	+1	known	frame_shift_del	c.436	p.F147fs	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_PKD_2	-	no_errors	CACNA1H	HGNC	ENSG00000196557	tier1			98	0	0.00	51	33	39.29
CACNA1S	0	genome.wustl.edu	37	1	201052298	201052298	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	201052298	201052298	C	T	SNP	CACNA1S	ENST00000362061	human	ensembl	74_37	-1	known	missense	c.1385	p.R462H	0.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su,prints_VDCC_L_a1ssu	-	no_errors	CACNA1S	HGNC	ENSG00000081248	tier1	rs146696298	-	48	0	0.00	37	13	26.00
CACNA2D4	0	genome.wustl.edu	37	12	2019083	2019083	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	2019083	2019083	C	A	SNP	CACNA2D4	ENST00000382722	human	ensembl	74_37	-1	known	nonsense	c.475	p.E159*	0.025	pfam_VWA_N	pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D4	HGNC	ENSG00000151062	tier1	-	-	30	0	0.00	44	8	15.38
CACNG5	0	genome.wustl.edu	37	17	64873530	64873530	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	64873530	64873530	C	T	SNP	CACNG5	ENST00000169565	human	ensembl	74_37	+1	known	missense	c.80	p.A27V	0.997	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu,prints_VDCC_g5su	-	no_errors	CACNG5	HGNC	ENSG00000075429	tier1	-	-	72	0	0.00	37	25	40.32
CACNG5	0	genome.wustl.edu	37	17	64873628	64873628	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	64873628	64873628	C	T	SNP	CACNG5	ENST00000169565	human	ensembl	74_37	+1	known	missense	c.178	p.R60W	1.000	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu,prints_VDCC_g5su	-	no_errors	CACNG5	HGNC	ENSG00000075429	tier1	rs141219015	-	43	0	0.00	25	16	39.02
CACNG5	0	genome.wustl.edu	37	17	64881306	64881306	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	64881306	64881306	C	T	SNP	CACNG5	ENST00000307139	human	ensembl	74_37	+1	known	silent	c.777	p.P259	0.066	NULL	pfam_PMP22/EMP/MP20/Claudin,prints_VDCC_gsu,prints_VDCC_g5su	-	no_errors	CACNG5	HGNC	ENSG00000075429	tier1	-	-	52	0	0.00	24	13	35.14
CAD	0	genome.wustl.edu	37	2	27457496	27457496	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	27457496	27457496	G	0	DEL	CAD	ENST00000264705	human	ensembl	74_37	+1	known	frame_shift_del	c.3729	p.E1245fs	1.000	pfam_CbamoylP_synth_lsu-like_ATP-bd,tigrfam_CarbamoylP_synth_lsu	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_Asp/Orn_carbamoyltranf_P-bd,pfam_GATASE,pfam_Asp_carbamoyltransf_Asp/Orn-bd,pfam_CarbamoylP_synth_lsu_oligo,pfam_CarbamoylP_synth_lsu_N,pfam_ATP-grasp_carboxylate-amine,pfam_MGS-like_dom,pfam_Dala_Dala_lig_C,pfam_Amidohydro_1,superfamily_Asp/Orn_carbamoylTrfase,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,superfamily_Metal-dep_hydrolase_composite,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,prints_Asp_carbamoyltransf,prints_Asp/Orn_carbamoylTrfase,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu,tigrfam_Asp_carbamoyltransf	-	no_errors	CAD	HGNC	ENSG00000084774				78	0	0.00	87	7	7.45
CALD1	0	genome.wustl.edu	37	7	134653474	134653475	+	RNA	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	134653474	134653475	-	T	INS	CALD1	ENST00000466704	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.008	-	-	-	no_errors	CALD1	HGNC	ENSG00000122786	tier1			35	0	0.00	20	7	25.93
CAMKK2	0	genome.wustl.edu	37	12	121678328	121678330	+	In_Frame_Del	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	121678328	121678330	TTT	-	DEL	CAMKK2	ENST00000392474	human	ensembl	74_37	-1	known	in_frame_del	c.1614_1612	p.K538in_frame_del	0.000:0.000:0.002	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMKK2	HGNC	ENSG00000110931	tier1			55	0	0.00	16	16	50.00
CAMKK2	0	genome.wustl.edu	37	12	121712281	121712281	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	121712281	121712281	G	-	DEL	CAMKK2	ENST00000324774	human	ensembl	74_37	-1	known	frame_shift_del	c.49	p.Q17fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMKK2	HGNC	ENSG00000110931	tier1			54	0	0.00	28	20	41.67
CAMSAP1	0	genome.wustl.edu	37	9	138715799	138715800	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	138715799	138715800	-	T	INS	CAMSAP1	ENST00000409386	human	ensembl	74_37	-1	known	frame_shift_ins	c.1430_1429	p.T477fs	0.022:0.003	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP1	HGNC	ENSG00000130559	tier1			42	0	0.00	28	2	6.67
CAMSAP2	0	genome.wustl.edu	37	1	200822549	200822549	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	200822549	200822549	A	-	DEL	CAMSAP2	ENST00000236925	human	ensembl	74_37	+1	known	frame_shift_del	c.3782	p.K1263fs	0.945	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP2	HGNC	ENSG00000118200	tier1			26	0	0.00	24	5	17.24
CAMSAP3	0	genome.wustl.edu	37	19	7670318	7670318	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	7670318	7670318	G	A	SNP	CAMSAP3	ENST00000446248	human	ensembl	74_37	+1	known	missense	c.355	p.E119K	0.889	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP3	HGNC	ENSG00000076826	tier1	-	-	29	0	0.00	8	6	42.86
CAMTA1	0	genome.wustl.edu	37	1	7723499	7723499	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	7723499	7723499	G	A	SNP	CAMTA1	ENST00000303635	human	ensembl	74_37	+1	known	missense	c.892	p.G298R	1.000	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA1	HGNC	ENSG00000171735	tier1	-	-	111	0	0.00	52	30	36.59
CAPG	0	genome.wustl.edu	37	2	85622671	85622671	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	85622671	85622671	G	-	DEL	CAPG	ENST00000263867	human	ensembl	74_37	-1	known	frame_shift_del	c.971	p.P324fs	0.057	pfam_Gelsolin_dom,smart_Villin/Gelsolin	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	CAPG	HGNC	ENSG00000042493	tier1			41	0	0.00	21	18	46.15
CAPG	0	genome.wustl.edu	37	2	85622675	85622675	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	85622675	85622675	C	T	SNP	CAPG	ENST00000263867	human	ensembl	74_37	-1	known	missense	c.967	p.A323T	0.933	pfam_Gelsolin_dom,smart_Villin/Gelsolin	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	CAPG	HGNC	ENSG00000042493	tier1	-	-	38	0	0.00	22	15	40.54
CAPN11	0	genome.wustl.edu	37	6	44145101	44145101	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	44145101	44145101	C	T	SNP	CAPN11	ENST00000398776	human	ensembl	74_37	+1	known	missense	c.1360	p.R454W	0.635	pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Calpain_III	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN11	HGNC	ENSG00000137225	tier1	rs201179894	-	32	0	0.00	21	21	50.00
CAPN6	0	genome.wustl.edu	37	X	110495579	110495579	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	110495579	110495579	A	G	SNP	CAPN6	ENST00000324068	human	ensembl	74_37	-1	known	missense	c.655	p.Y219H	1.000	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,pfam_C2_dom,superfamily_Calpain_domain_III,superfamily_C2_dom,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_C2_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN6	HGNC	ENSG00000077274	tier1	-	-	38	0	0.00	8	26	76.47
CAPZA2	0	genome.wustl.edu	37	7	116520180	116520180	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	116520180	116520180	T	-	DEL	CAPZA2	ENST00000449080	human	ensembl	74_37	+1	known	frame_shift_del	c.99	p.L36fs	0.021	NULL	NULL	-	no_errors	CAPZA2	HGNC	ENSG00000198898	tier1			20	0	0.00	23	7	23.33
CARD8	0	genome.wustl.edu	37	19	48685631	48685633	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	48685631	48685633	AAA	-	DEL	CARD8	ENST00000600800	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.001	-	-	-	no_errors	CARD8	HGNC	ENSG00000105483	tier1			14	0	0.00	11	10	47.62
CARD9	0	genome.wustl.edu	37	9	139264771	139264771	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	139264771	139264771	C	T	SNP	CARD9	ENST00000371732	human	ensembl	74_37	-1	known	missense	c.926	p.R309H	0.997	NULL	pfam_CARD,superfamily_DEATH-like_dom,pfscan_CARD	-	no_errors	CARD9	HGNC	ENSG00000187796	tier1	-	-	51	0	0.00	18	16	47.06
CARKD	0	genome.wustl.edu	37	13	111277612	111277612	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	111277612	111277612	G	A	SNP	CARKD	ENST00000309957	human	ensembl	74_37	+1	known	missense	c.373	p.V125I	1.000	pfam_YjeF_C_carb_kinase-rel,tigrfam_YjeF_C_carb_kinase-rel	pfam_YjeF_C_carb_kinase-rel,tigrfam_YjeF_C_carb_kinase-rel	-	no_errors	CARKD	HGNC	ENSG00000213995	tier1	rs147657999	-	36	0	0.00	16	25	60.98
CARM1	0	genome.wustl.edu	37	19	11032065	11032065	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	11032065	11032065	G	A	SNP	CARM1	ENST00000327064	human	ensembl	74_37	+1	known	missense	c.1630	p.V544I	1.000	NULL	pfam_Histone-Arg_MeTrfase_N,pfam_Arg_MeTrfase,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Small_mtfrase_dom,pfam_mo5U34_MeTrfas-like,pfam_Methyltransf_11	-	no_errors	CARM1	HGNC	ENSG00000142453	tier1	-	-	84	0	0.00	49	4	7.55
CARNS1	0	genome.wustl.edu	37	11	67185908	67185908	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	67185908	67185908	C	A	SNP	CARNS1	ENST00000445895	human	ensembl	74_37	+1	known	missense	c.281	p.P94H	1.000	superfamily_TIL_dom	superfamily_PreATP-grasp_dom,superfamily_TIL_dom,pfscan_ATP-grasp	-	no_errors	CARNS1	HGNC	ENSG00000172508	tier1	-	-	109	0	0.00	65	41	38.68
CASP16	0	genome.wustl.edu	37	16	3194815	3194815	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	3194815	3194815	G	A	SNP	CASP16	ENST00000571356	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.958	-	-	-	no_errors	CASP16	HGNC	ENSG00000228146	tier1	-	-	54	0	0.00	40	25	38.46
CASP5	0	genome.wustl.edu	37	11	104868169	104868169	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	104868169	104868169	G	T	SNP	CASP5	ENST00000393141	human	ensembl	74_37	-1	known	missense	c.1186	p.L396I	0.416	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_Pept_C14_p10	pfam_Pept_C14_caspase,pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP5	HGNC	ENSG00000137757	tier1	-	-	70	0	0.00	88	5	5.38
CASZ1	0	genome.wustl.edu	37	1	10715751	10715751	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	10715751	10715751	G	A	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	silent	c.1620	p.H540	0.982	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940	tier1	-	-	69	0	0.00	36	18	33.33
CATSPER1	0	genome.wustl.edu	37	11	65793344	65793344	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	65793344	65793344	G	A	SNP	CATSPER1	ENST00000312106	human	ensembl	74_37	-1	known	silent	c.507	p.H169	0.000	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel	-	no_errors	CATSPER1	HGNC	ENSG00000175294	tier1	-	-	59	0	0.00	28	16	36.36
CBLC	0	genome.wustl.edu	37	19	45295733	45295733	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	45295733	45295733	G	A	SNP	CBLC	ENST00000270279	human	ensembl	74_37	+1	known	missense	c.1099	p.G367R	0.996	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Adaptor_Cbl_N_hlx,pfam_Znf_C3HC4_RING-type,superfamily_Adaptor_Cbl_N_hlx,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	CBLC	HGNC	ENSG00000142273	tier1	-	-	41	0	0.00	16	12	42.86
CBR3-AS1	0	genome.wustl.edu	37	21	37504209	37504210	+	RNA	INS	-	-	AAAT			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	37504209	37504210	0	AAAT	INS	CBR3-AS1	ENST00000413862	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997:0.993	-	-	-	no_errors	CBR3-AS1	HGNC	ENSG00000236830				10	0	0.00	6	2	25.00
CBWD6	0	genome.wustl.edu	37	9	69218744	69218744	+	RNA	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	69218744	69218744	T	A	SNP	CBWD6	ENST00000477430	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	CBWD6	HGNC	ENSG00000204790	tier1	-	-	30	0	0.00	66	10	13.16
CBWD6	0	genome.wustl.edu	37	9	69218755	69218755	+	RNA	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	69218755	69218755	A	T	SNP	CBWD6	ENST00000477430	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CBWD6	HGNC	ENSG00000204790	tier1	-	-	33	0	0.00	65	10	13.33
CBWD6	0	genome.wustl.edu	37	9	69218762	69218762	+	RNA	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	69218762	69218762	A	C	SNP	CBWD6	ENST00000477430	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CBWD6	HGNC	ENSG00000204790	tier1	-	-	33	0	0.00	58	17	22.67
CBWD6	0	genome.wustl.edu	37	9	69218763	69218763	+	RNA	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	69218763	69218763	A	C	SNP	CBWD6	ENST00000477430	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	CBWD6	HGNC	ENSG00000204790	tier1	-	-	33	0	0.00	50	25	33.33
CBX6	0	genome.wustl.edu	37	22	39263028	39263028	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	39263028	39263028	C	-	DEL	CBX6	ENST00000407418	human	ensembl	74_37	-1	known	frame_shift_del	c.425	p.G142fs	1.000	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow,prints_Chromo_dom_subgr	-	no_errors	CBX6	HGNC	ENSG00000183741	tier1			33	0	0.00	16	10	38.46
CBX8	0	genome.wustl.edu	37	17	77768661	77768662	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	77768661	77768662	-	G	INS	CBX8	ENST00000269385	human	ensembl	74_37	-1	known	frame_shift_ins	c.943_942	p.S314fs	0.052:0.011	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CBX8	HGNC	ENSG00000141570	tier1			22	0	0.00	9	2	18.18
CBX8	0	genome.wustl.edu	37	17	77768912	77768912	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	77768912	77768912	A	G	SNP	CBX8	ENST00000269385	human	ensembl	74_37	-1	known	missense	c.692	p.L231P	0.990	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CBX8	HGNC	ENSG00000141570	tier1	-	-	47	0	0.00	17	14	45.16
CCDC105	0	genome.wustl.edu	37	19	15122081	15122081	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	15122081	15122081	C	T	SNP	CCDC105	ENST00000292574	human	ensembl	74_37	+1	known	silent	c.444	p.N148	0.046	pfam_Tektin	pfam_Tektin	-	no_errors	CCDC105	HGNC	ENSG00000160994				17	0	0.00	17	5	22.73
CCDC13	0	genome.wustl.edu	37	3	42799707	42799707	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	42799707	42799707	G	T	SNP	CCDC13	ENST00000310232	human	ensembl	74_37	-1	known	missense	c.131	p.A44D	0.000	NULL	superfamily_Prefoldin	-	no_errors	CCDC13	HGNC	ENSG00000244607	tier1	-	-	147	0	0.00	117	7	5.65
CCDC136	0	genome.wustl.edu	37	7	128455793	128455794	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	128455793	128455794	GT	-	DEL	CCDC136	ENST00000297788	human	ensembl	74_37	+1	known	frame_shift_del	c.3171_3172	p.C1058fs	0.000:0.000	NULL	NULL	-	no_errors	CCDC136	HGNC	ENSG00000128596	tier1			45	0	0.00	27	13	32.50
CCDC142	0	genome.wustl.edu	37	2	74709916	74709916	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	74709916	74709916	G	A	SNP	CCDC142	ENST00000393965	human	ensembl	74_37	-1	known	missense	c.49	p.P17S	0.001	NULL	NULL	-	no_errors	CCDC142	HGNC	ENSG00000135637	tier1	-	-	36	0	0.00	17	11	39.29
CCDC144B	0	genome.wustl.edu	37	17	18528581	18528581	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	18528581	18528581	G	A	SNP	CCDC144B	ENST00000450277	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.052	-	-	-	no_errors	CCDC144B	HGNC	ENSG00000154874	tier1	-	-	73	0	0.00	30	24	44.44
CCDC150	0	genome.wustl.edu	37	2	197584490	197584491	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	197584490	197584491	AA	-	DEL	CCDC150	ENST00000461825	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CCDC150	HGNC	ENSG00000144395	tier1			27	0	0.00	16	26	61.90
CCDC169	0	genome.wustl.edu	37	13	36857616	36857616	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	36857616	36857616	C	T	SNP	CCDC169	ENST00000239859	human	ensembl	74_37	-1	known	missense	c.305	p.R102Q	0.002	NULL	NULL	-	no_errors	CCDC169	HGNC	ENSG00000242715	tier1	-	-	67	0	0.00	86	12	12.24
CCDC19	0	genome.wustl.edu	37	1	159863013	159863013	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	159863013	159863013	G	A	SNP	CCDC19	ENST00000368099	human	ensembl	74_37	-1	known	missense	c.86	p.A29V	0.988	NULL	NULL	-	no_errors	CCDC19	HGNC	ENSG00000213085	tier1	-	-	69	0	0.00	70	38	35.19
CCDC3	0	genome.wustl.edu	37	10	12940451	12940451	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	12940451	12940451	G	A	SNP	CCDC3	ENST00000378825	human	ensembl	74_37	-1	known	missense	c.778	p.R260W	0.615	NULL	NULL	-	no_errors	CCDC3	HGNC	ENSG00000151468				12	0	0.00	8	4	33.33
CCDC30	0	genome.wustl.edu	37	1	42948563	42948564	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	42948563	42948564	AA	-	DEL	CCDC30	ENST00000475614	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.003	-	-	-	no_errors	CCDC30	HGNC	ENSG00000186409	tier1			30	0	0.00	7	17	70.83
CCDC33	0	genome.wustl.edu	37	15	74573101	74573101	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	74573101	74573101	A	-	DEL	CCDC33	ENST00000321288	human	ensembl	74_37	+1	known	frame_shift_del	c.1591	p.G532fs	0.120	NULL	pfam_C2_dom,superfamily_C2_dom	-	no_errors	CCDC33	HGNC	ENSG00000140481	tier1			61	0	0.00	46	17	26.98
CCDC33	0	genome.wustl.edu	37	15	74627334	74627334	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	74627334	74627334	C	T	SNP	CCDC33	ENST00000321288	human	ensembl	74_37	+1	known	missense	c.2755	p.R919C	0.993	NULL	pfam_C2_dom,superfamily_C2_dom	-	no_errors	CCDC33	HGNC	ENSG00000140481	tier1	-	-	76	0	0.00	39	19	32.76
CCDC40	0	genome.wustl.edu	37	17	78055751	78055751	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	78055751	78055751	C	T	SNP	CCDC40	ENST00000397545	human	ensembl	74_37	+1	known	missense	c.1883	p.T628M	0.003	NULL	pfam_E3_ubiquit_lig_BRE1	-	no_errors	CCDC40	HGNC	ENSG00000141519	tier1	-	-	27	0	0.00	16	15	48.39
CCDC43	0	genome.wustl.edu	37	17	42756253	42756253	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	42756253	42756253	T	-	DEL	CCDC43	ENST00000315286	human	ensembl	74_37	-1	known	frame_shift_del	c.646	p.R216fs	1.000	NULL	NULL	-	no_errors	CCDC43	HGNC	ENSG00000180329	tier1			83	0	0.00	49	16	24.62
CCDC43	0	genome.wustl.edu	37	17	42756261	42756261	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	42756261	42756261	T	C	SNP	CCDC43	ENST00000315286	human	ensembl	74_37	-1	known	missense	c.638	p.E213G	1.000	NULL	NULL	-	no_errors	CCDC43	HGNC	ENSG00000180329				83	0	0.00	59	6	9.23
CCDC57	0	genome.wustl.edu	37	17	80121090	80121090	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	80121090	80121090	G	A	SNP	CCDC57	ENST00000389641	human	ensembl	74_37	-1	known	nonsense	c.2026	p.R676*	0.000	NULL	NULL	-	no_errors	CCDC57	HGNC	ENSG00000176155	tier1	rs201336748	-	55	0	0.00	24	14	36.84
CCDC63	0	genome.wustl.edu	37	12	111321964	111321964	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	111321964	111321964	C	T	SNP	CCDC63	ENST00000308208	human	ensembl	74_37	+1	known	silent	c.984	p.A328	1.000	NULL	NULL	-	no_errors	CCDC63	HGNC	ENSG00000173093	tier1	-	-	75	0	0.00	51	37	42.05
CCDC77	0	genome.wustl.edu	37	12	521005	521005	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	521005	521005	C	-	DEL	CCDC77	ENST00000239830	human	ensembl	74_37	+1	known	frame_shift_del	c.131	p.E46fs	1.000	NULL	NULL	-	no_errors	CCDC77	HGNC	ENSG00000120647	tier1			23	0	0.00	22	26	54.17
CCDC96	0	genome.wustl.edu	37	4	7043578	7043578	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	7043578	7043578	G	A	SNP	CCDC96	ENST00000310085	human	ensembl	74_37	-1	known	missense	c.1088	p.A363V	0.842	NULL	NULL	-	no_errors	CCDC96	HGNC	ENSG00000173013	tier1	-	-	23	0	0.00	9	8	47.06
CCER1	0	genome.wustl.edu	37	12	91348110	91348110	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	91348110	91348110	G	0	DEL	CCER1	ENST00000358859	human	ensembl	74_37	-1	known	frame_shift_del	c.410	p.P137fs	0.002	NULL	NULL	-	no_errors	CCER1	HGNC	ENSG00000197651				16	0	0.00	16	5	23.81
CCL14	0	genome.wustl.edu	37	17	34312816	34312816	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	34312816	34312816	G	T	SNP	CCL14	ENST00000435911	human	ensembl	74_37	-1	known	missense	c.95	p.P32Q	0.000	NULL	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL14	HGNC	ENSG00000213494	tier1	-	-	65	0	0.00	54	5	8.47
CCNF	0	genome.wustl.edu	37	16	2499297	2499297	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	2499297	2499297	G	T	SNP	CCNF	ENST00000397066	human	ensembl	74_37	+1	known	silent	c.1233	p.V411	0.949	pfam_Cyclin_C-dom,superfamily_Cyclin-like	pfam_Cyclin_N,pfam_Cyclin_C-dom,pfam_F-box_dom,superfamily_Cyclin-like,superfamily_F-box_dom,smart_F-box_dom,smart_Cyclin-like,pfscan_F-box_dom	-	no_errors	CCNF	HGNC	ENSG00000162063	tier1	-	-	15	0	0.00	16	4	20.00
CCNF	0	genome.wustl.edu	37	16	2499426	2499426	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	2499426	2499426	C	T	SNP	CCNF	ENST00000397066	human	ensembl	74_37	+1	known	silent	c.1362	p.A454	0.004	pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like	pfam_Cyclin_N,pfam_Cyclin_C-dom,pfam_F-box_dom,superfamily_Cyclin-like,superfamily_F-box_dom,smart_F-box_dom,smart_Cyclin-like,pfscan_F-box_dom	-	no_errors	CCNF	HGNC	ENSG00000162063				13	0	0.00	9	3	25.00
CCNL1	0	genome.wustl.edu	37	3	156866204	156866204	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	156866204	156866204	T	-	DEL	CCNL1	ENST00000295926	human	ensembl	74_37	-1	known	frame_shift_del	c.1407	p.K469fs	0.503	pirsf_Cyclin_L	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	-	no_errors	CCNL1	HGNC	ENSG00000163660	tier1			122	0	0.00	66	35	34.65
CCNYL2	0	genome.wustl.edu	37	10	42928728	42928728	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	42928728	42928728	C	T	SNP	CCNYL2	ENST00000483242	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.977	-	-	-	no_errors	CCNYL2	HGNC	ENSG00000182632	tier1	-	-	175	0	0.00	120	59	32.96
CCSAP	0	genome.wustl.edu	37	1	229460198	229460198	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	229460198	229460198	A	-	DEL	CCSAP	ENST00000483092	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CCSAP	HGNC	ENSG00000154429	tier1			28	0	0.00	39	14	26.42
CCSAP	0	genome.wustl.edu	37	1	229460857	229460857	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	229460857	229460857	A	-	DEL	CCSAP	ENST00000483092	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CCSAP	HGNC	ENSG00000154429	tier1			34	0	0.00	43	21	32.81
CCSER1	0	genome.wustl.edu	37	4	91389480	91389480	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	91389480	91389480	C	T	SNP	CCSER1	ENST00000333691	human	ensembl	74_37	+1	known	missense	c.1699	p.P567S	0.263	NULL	NULL	-	no_errors	CCSER1	HGNC	ENSG00000184305	tier1	-	-	61	0	0.00	43	38	46.91
CCSER2	0	genome.wustl.edu	37	10	86133433	86133433	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	86133433	86133433	C	A	SNP	CCSER2	ENST00000372088	human	ensembl	74_37	+1	known	missense	c.1476	p.D492E	1.000	NULL	NULL	-	no_errors	CCSER2	HGNC	ENSG00000107771	tier1	-	-	52	0	0.00	44	21	32.31
CD109	0	genome.wustl.edu	37	6	74495145	74495145	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	74495145	74495145	G	T	SNP	CD109	ENST00000287097	human	ensembl	74_37	+1	known	missense	c.2282	p.G761V	1.000	pfam_Macroglobln_a2	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	CD109	HGNC	ENSG00000156535	tier1	-	-	49	0	0.00	50	6	10.71
CD160	0	genome.wustl.edu	37	1	145704302	145704302	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	145704302	145704302	G	A	SNP	CD160	ENST00000235933	human	ensembl	74_37	-1	known	nonsense	c.115	p.R39*	0.000	NULL	NULL	-	no_errors	CD160	HGNC	ENSG00000117281	tier1	rs149851492	-	58	0	0.00	32	15	31.91
CD28	0	genome.wustl.edu	37	2	204571260	204571260	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	204571260	204571260	T	C	SNP	CD28	ENST00000458610	human	ensembl	74_37	+1	putative	missense	c.14	p.L5S	0.998	NULL	pfam_Ig_V-set,smart_Ig_V-set_subgr,prints_CD28	-	no_errors	CD28	HGNC	ENSG00000178562	tier1	-	-	184	0	0.00	92	71	43.56
CD300C	0	genome.wustl.edu	37	17	72539041	72539041	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	72539041	72539041	G	A	SNP	CD300C	ENST00000330793	human	ensembl	74_37	-1	known	silent	c.486	p.S162	0.000	NULL	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	CD300C	HGNC	ENSG00000167850	tier1	-	-	64	0	0.00	37	15	28.85
CD36	0	genome.wustl.edu	37	7	80286011	80286011	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	80286011	80286011	G	A	SNP	CD36	ENST00000309881	human	ensembl	74_37	+1	known	silent	c.276	p.T92	0.004	pfam_CD36,prints_CD36	pfam_CD36,prints_CD36_antigen,prints_CD36	-	no_errors	CD36	HGNC	ENSG00000135218	tier1	-	-	26	0	0.00	10	11	52.38
CD3EAP	0	genome.wustl.edu	37	19	45911872	45911872	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	45911872	45911872	A	-	DEL	CD3EAP	ENST00000589804	human	ensembl	74_37	+1	known	frame_shift_del	c.652	p.N220fs	0.178	pfam_DNA-dir_RNA_pol1_su_RPA34	pfam_DNA-dir_RNA_pol1_su_RPA34	-	no_errors	CD3EAP	HGNC	ENSG00000117877	tier1			50	0	0.00	13	7	35.00
CD3G	0	genome.wustl.edu	37	11	118220583	118220583	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	118220583	118220583	A	-	DEL	CD3G	ENST00000532917	human	ensembl	74_37	+1	known	frame_shift_del	c.205	p.K71fs	0.000	smart_Ig_sub2	pfam_Phos_immunorcpt_sig_ITAM,smart_Ig_sub2,smart_Phos_immunorcpt_sig_ITAM,pfscan_Phos_immunorcpt_sig_ITAM	-	no_errors	CD3G	HGNC	ENSG00000160654	tier1			40	0	0.00	33	16	32.65
CD46	0	genome.wustl.edu	37	1	207930454	207930454	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	207930454	207930454	A	-	DEL	CD46	ENST00000322875	human	ensembl	74_37	+1	known	frame_shift_del	c.193	p.G67fs	0.001	pirsf_M_CF_CD46,pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pirsf_M_CF_CD46,pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CD46	HGNC	ENSG00000117335	tier1			70	0	0.00	99	22	18.18
CD46	0	genome.wustl.edu	37	1	207934699	207934699	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	207934699	207934699	C	T	SNP	CD46	ENST00000322875	human	ensembl	74_37	+1	known	missense	c.581	p.A194V	0.000	pirsf_M_CF_CD46,pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pirsf_M_CF_CD46,pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CD46	HGNC	ENSG00000117335	tier1	-	-	98	0	0.00	105	49	31.82
CD47	0	genome.wustl.edu	37	3	107762206	107762206	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	107762206	107762206	T	-	DEL	CD47	ENST00000471694	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.995	-	-	-	no_errors	CD47	HGNC	ENSG00000196776	tier1			21	0	0.00	26	7	21.21
CD5L	0	genome.wustl.edu	37	1	157805866	157805866	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	157805866	157805866	C	A	SNP	CD5L	ENST00000368174	human	ensembl	74_37	-1	known	missense	c.135	p.W45C	1.000	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	CD5L	HGNC	ENSG00000073754	tier1	-	-	41	0	0.00	35	16	31.37
CD72	0	genome.wustl.edu	37	9	35610103	35610103	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	35610103	35610103	C	T	SNP	CD72	ENST00000490239	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.191	-	-	-	no_errors	CD72	HGNC	ENSG00000137101	tier1	-	-	51	0	0.00	21	23	52.27
CD79A	0	genome.wustl.edu	37	19	42383610	42383610	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	42383610	42383610	C	-	DEL	CD79A	ENST00000221972	human	ensembl	74_37	+1	known	frame_shift_del	c.385	p.R131fs	0.007	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Phos_immunorcpt_sig_ITAM,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Phos_immunorcpt_sig_ITAM,pfscan_Phos_immunorcpt_sig_ITAM,pfscan_Ig-like_dom	-	no_errors	CD79A	HGNC	ENSG00000105369	tier1			35	0	0.00	24	10	29.41
CD9	0	genome.wustl.edu	37	12	6347089	6347089	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	6347089	6347089	T	-	DEL	CD9	ENST00000481267	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	CD9	HGNC	ENSG00000010278	tier1			9	0	0.00	14	15	51.72
CD93	0	genome.wustl.edu	37	20	23065105	23065105	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	23065105	23065105	G	T	SNP	CD93	ENST00000246006	human	ensembl	74_37	-1	known	silent	c.1725	p.G575	0.263	NULL	pirsf_CD93/CD141,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_MFS_dom_general_subst_transpt,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_C-type_lectin	-	no_errors	CD93	HGNC	ENSG00000125810	tier1	-	-	78	0	0.00	44	19	30.16
CDC123	0	genome.wustl.edu	37	10	12292343	12292343	+	RNA	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	12292343	12292343	T	C	SNP	CDC123	ENST00000498747	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CDC123	HGNC	ENSG00000151465	tier1	-	-	43	0	0.00	38	15	28.30
CDC14A	0	genome.wustl.edu	37	1	100889837	100889837	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	100889837	100889837	C	-	DEL	CDC14A	ENST00000361544	human	ensembl	74_37	+1	known	frame_shift_del	c.369	p.Y126fs	0.021	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	CDC14A	HGNC	ENSG00000079335	tier1			97	0	0.00	56	31	35.63
CDC16	0	genome.wustl.edu	37	13	115012591	115012591	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	115012591	115012591	T	-	DEL	CDC16	ENST00000494581	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	CDC16	HGNC	ENSG00000130177	tier1			22	0	0.00	16	12	42.86
CDC42BPA	0	genome.wustl.edu	37	1	227219077	227219077	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	227219077	227219077	G	A	SNP	CDC42BPA	ENST00000334218	human	ensembl	74_37	-1	known	missense	c.3592	p.R1198C	1.000	NULL	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Pkinase_C,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,superfamily_WD40_repeat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,smart_CRIB_dom,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CDC42BPA	HGNC	ENSG00000143776	tier1	-	-	31	0	0.00	38	10	20.83
CDC42BPA	0	genome.wustl.edu	37	1	227288919	227288919	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	227288919	227288919	G	T	SNP	CDC42BPA	ENST00000334218	human	ensembl	74_37	-1	known	missense	c.2023	p.P675T	1.000	NULL	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Pkinase_C,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,superfamily_WD40_repeat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,smart_CRIB_dom,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CDC42BPA	HGNC	ENSG00000143776	tier1	-	-	58	0	0.00	71	6	7.79
CDC45	0	genome.wustl.edu	37	22	19496067	19496067	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	19496067	19496067	G	A	SNP	CDC45	ENST00000437685	human	ensembl	74_37	+1	known	missense	c.1166	p.R389H	1.000	pfam_CDC45	pfam_CDC45	-	no_errors	CDC45	HGNC	ENSG00000093009	tier1	-	-	78	0	0.00	51	23	30.67
CDC7	0	genome.wustl.edu	37	1	91967300	91967300	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	91967300	91967300	G	T	SNP	CDC7	ENST00000234626	human	ensembl	74_37	+1	known	missense	c.27	p.M9I	0.981	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDC7	HGNC	ENSG00000097046	tier1	-	-	50	0	0.00	46	4	7.84
CDC7	0	genome.wustl.edu	37	1	91978780	91978780	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	91978780	91978780	G	T	SNP	CDC7	ENST00000234626	human	ensembl	74_37	+1	known	silent	c.738	p.L246	0.004	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDC7	HGNC	ENSG00000097046				26	0	0.00	31	4	11.43
CDCP2	0	genome.wustl.edu	37	1	54606938	54606938	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	54606938	54606938	G	A	SNP	CDCP2	ENST00000371330	human	ensembl	74_37	-1	novel	missense	c.596	p.T199I	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	-	no_errors	CDCP2	HGNC	ENSG00000157211	tier1	-	-	32	0	0.00	23	14	37.84
CDH18	0	genome.wustl.edu	37	5	19543993	19543993	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	19543993	19543993	T	C	SNP	CDH18	ENST00000274170	human	ensembl	74_37	-1	known	missense	c.1375	p.T459A	0.987	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH18	HGNC	ENSG00000145526	tier1	-	-	75	0	0.00	118	38	24.36
CDH20	0	genome.wustl.edu	37	18	59166500	59166500	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	59166500	59166500	G	A	SNP	CDH20	ENST00000262717	human	ensembl	74_37	+1	known	missense	c.328	p.D110N	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH20	HGNC	ENSG00000101542	tier1	-	-	51	0	0.00	30	19	38.78
CDHR2	0	genome.wustl.edu	37	5	176008500	176008500	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	176008500	176008500	G	A	SNP	CDHR2	ENST00000261944	human	ensembl	74_37	+1	known	missense	c.1975	p.G659S	0.997	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR2	HGNC	ENSG00000074276	tier1	-	-	96	0	0.00	53	39	42.39
CDHR3	0	genome.wustl.edu	37	7	105664829	105664829	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	105664829	105664829	C	T	SNP	CDHR3	ENST00000343407	human	ensembl	74_37	+1	known	nonsense	c.586	p.Q196*	1.000	NULL	superfamily_Cadherin-like,pfscan_Cadherin	-	no_errors	CDHR3	HGNC	ENSG00000128536	tier1	-	-	107	0	0.00	84	30	26.32
CDK12	0	genome.wustl.edu	37	17	37650845	37650845	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	37650845	37650845	C	T	SNP	CDK12	ENST00000447079	human	ensembl	74_37	+1	known	missense	c.2317	p.R773C	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK12	HGNC	ENSG00000167258	tier1	-	-	42	0	0.00	23	15	39.47
CDK18	0	genome.wustl.edu	37	1	205501330	205501330	+	RNA	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	205501330	205501330	T	G	SNP	CDK18	ENST00000509056	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CDK18	HGNC	ENSG00000117266	tier1	-	-	37	0	0.00	35	10	22.22
CDK5RAP2	0	genome.wustl.edu	37	9	123223027	123223028	+	Splice_Site	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	123223027	123223028	TT	-	DEL	CDK5RAP2	ENST00000480112	human	ensembl	74_37	-1	known	splice_site_del	c.2104-3_2104-2	e19-2	0.979:0.982	-	-	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861	tier1			50	0	0.00	26	9	25.71
CDKAL1	0	genome.wustl.edu	37	6	20955679	20955679	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	20955679	20955679	G	T	SNP	CDKAL1	ENST00000274695	human	ensembl	74_37	+1	known	nonsense	c.772	p.E258*	1.000	pfam_rSAM,smart_Elp3/MiaB/NifB,tigrfam_MiaB-like_B,tigrfam_Methylthiotransferase	pfam_Methylthiotransferase_N,pfam_rSAM,pfam_TRAM_dom,smart_Elp3/MiaB/NifB,pfscan_TRAM_dom,tigrfam_MiaB-like_B,tigrfam_Methylthiotransferase	-	no_errors	CDKAL1	HGNC	ENSG00000145996	tier1	-	-	59	0	0.00	68	4	5.56
CDR2L	0	genome.wustl.edu	37	17	72999572	72999572	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	72999572	72999572	G	A	SNP	CDR2L	ENST00000337231	human	ensembl	74_37	+1	known	silent	c.801	p.P267	0.892	NULL	NULL	-	no_errors	CDR2L	HGNC	ENSG00000109089	tier1	-	-	60	0	0.00	31	23	42.59
CDS2	0	genome.wustl.edu	37	20	5170988	5170991	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	5170988	5170991	TTTT	-	DEL	CDS2	ENST00000379070	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.004:0.004:0.002	-	-	-	no_errors	CDS2	HGNC	ENSG00000101290	tier1			66	0	0.00	39	20	33.90
CDX2	0	genome.wustl.edu	37	13	28539139	28539139	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	28539139	28539139	C	T	SNP	CDX2	ENST00000381020	human	ensembl	74_37	-1	known	silent	c.555	p.T185	0.998	superfamily_Homeodomain-like,pfscan_Homeobox_dom	pfam_Caudal_activation_dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	CDX2	HGNC	ENSG00000165556	tier1	-	-	84	0	0.00	54	52	49.06
CEACAM18	0	genome.wustl.edu	37	19	51981849	51981849	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	51981849	51981849	G	A	SNP	CEACAM18	ENST00000451626	human	ensembl	74_37	+1	known	missense	c.136	p.A46T	0.000	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CEACAM18	HGNC	ENSG00000213822	tier1	-	-	64	0	0.00	28	19	40.43
CECR2	0	genome.wustl.edu	37	22	18028458	18028458	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	18028458	18028458	A	G	SNP	CECR2	ENST00000400573	human	ensembl	74_37	+1	novel	missense	c.3415	p.R1139G	0.017	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	CECR2	HGNC	ENSG00000099954	tier1	-	-	35	0	0.00	24	9	27.27
CECR6	0	genome.wustl.edu	37	22	17600401	17600401	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	17600401	17600401	G	A	SNP	CECR6	ENST00000331437	human	ensembl	74_37	-1	known	silent	c.1617	p.S539	0.000	NULL	NULL	-	no_errors	CECR6	HGNC	ENSG00000183307	tier1	-	-	36	0	0.00	21	16	43.24
CELF2	0	genome.wustl.edu	37	10	11207539	11207539	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	11207539	11207539	C	T	SNP	CELF2	ENST00000450189	human	ensembl	74_37	+1	known	silent	c.165	p.P55	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA	-	no_errors	CELF2	HGNC	ENSG00000048740	tier1	-	-	54	0	0.00	25	13	34.21
CELF2	0	genome.wustl.edu	37	10	11291153	11291153	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	11291153	11291153	A	-	DEL	CELF2	ENST00000450189	human	ensembl	74_37	+1	known	frame_shift_del	c.392	p.K132fs	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA	-	no_errors	CELF2	HGNC	ENSG00000048740	tier1			57	0	0.00	31	19	38.00
CELP	0	genome.wustl.edu	37	9	135962433	135962433	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	135962433	135962433	G	A	SNP	CELP	ENST00000411440	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CELP	HGNC	ENSG00000170827	tier1	-	-	24	0	0.00	15	7	31.82
CELSR2	0	genome.wustl.edu	37	1	109812405	109812405	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	109812405	109812405	C	T	SNP	CELSR2	ENST00000271332	human	ensembl	74_37	+1	known	missense	c.7070	p.T2357M	1.000	pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126	tier1	-	-	36	0	0.00	15	3	16.67
CELSR2	0	genome.wustl.edu	37	1	109816043	109816043	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	109816043	109816043	C	T	SNP	CELSR2	ENST00000498157	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.232	-	-	-	no_errors	CELSR2	HGNC	ENSG00000143126	tier1	-	-	44	0	0.00	43	17	28.33
CELSR3	0	genome.wustl.edu	37	3	48697857	48697858	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	48697857	48697858	AG	-	DEL	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	frame_shift_del	c.2211_2210	p.S737fs	0.098:1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300	tier1			60	0	0.00	36	11	23.40
CEND1	0	genome.wustl.edu	37	11	788130	788130	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	788130	788130	T	-	DEL	CEND1	ENST00000330106	human	ensembl	74_37	-1	known	frame_shift_del	c.447	p.K149fs	0.985	NULL	NULL	-	no_errors	CEND1	HGNC	ENSG00000184524	tier1			24	0	0.00	11	12	52.17
CEP290	0	genome.wustl.edu	37	12	88487681	88487681	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	88487681	88487681	T	-	DEL	CEP290	ENST00000309041	human	ensembl	74_37	-1	known	frame_shift_del	c.3181	p.I1061fs	1.000	NULL	NULL	-	no_errors	CEP290	HGNC	ENSG00000198707	tier1			43	0	0.00	44	17	27.87
CEP350	0	genome.wustl.edu	37	1	179993623	179993623	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	179993623	179993623	T	C	SNP	CEP350	ENST00000367607	human	ensembl	74_37	+1	known	silent	c.3456	p.V1152	0.004	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	-	no_errors	CEP350	HGNC	ENSG00000135837	tier1	-	-	42	0	0.00	71	17	19.32
CEPT1	0	genome.wustl.edu	37	1	111703576	111703578	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	111703576	111703578	AAA	-	DEL	CEPT1	ENST00000480324	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.207:0.326:0.318	-	-	-	no_errors	CEPT1	HGNC	ENSG00000134255	tier1			19	0	0.00	14	4	22.22
CERK	0	genome.wustl.edu	37	22	47095243	47095243	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	47095243	47095243	G	A	SNP	CERK	ENST00000216264	human	ensembl	74_37	-1	known	missense	c.910	p.R304W	1.000	NULL	pfam_Diacylglycerol_kinase_cat_dom,superfamily_ATP-NAD_kinase_PpnK-typ,smart_Diacylglycerol_kinase_cat_dom	-	no_errors	CERK	HGNC	ENSG00000100422	tier1	-	-	94	0	0.00	36	32	47.06
CERS2	0	genome.wustl.edu	37	1	150937767	150937767	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	150937767	150937767	T	-	DEL	CERS2	ENST00000345896	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CERS2	HGNC	ENSG00000143418	tier1			14	0	0.00	26	15	36.59
CES1	0	genome.wustl.edu	37	16	55857578	55857578	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	55857578	55857578	G	A	SNP	CES1	ENST00000360526	human	ensembl	74_37	-1	known	silent	c.423	p.H141	0.907	pfam_CarbesteraseB,pfam_AB_hydrolase_3	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES1	HGNC	ENSG00000198848	tier1	-	-	491	0	0.00	319	110	25.64
CES5A	0	genome.wustl.edu	37	16	55903619	55903619	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	55903619	55903619	C	T	SNP	CES5A	ENST00000521992	human	ensembl	74_37	-1	known	missense	c.542	p.G181D	0.961	pfam_CarbesteraseB,pfam_AB_hydrolase_3	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES5A	HGNC	ENSG00000159398	tier1	-	-	55	0	0.00	35	15	30.00
CETN3	0	genome.wustl.edu	37	5	89701581	89701581	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	89701581	89701581	T	-	DEL	CETN3	ENST00000283122	human	ensembl	74_37	-1	known	frame_shift_del	c.189	p.A64fs	1.000	pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CETN3	HGNC	ENSG00000153140	tier1			66	0	0.00	59	26	30.59
CGN	0	genome.wustl.edu	37	1	151491588	151491588	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	151491588	151491588	G	T	SNP	CGN	ENST00000271636	human	ensembl	74_37	+1	known	missense	c.593	p.G198V	1.000	NULL	pfam_Myosin_tail	-	no_errors	CGN	HGNC	ENSG00000143375				42	0	0.00	51	4	7.27
CHAF1A	0	genome.wustl.edu	37	19	4409561	4409564	+	Frame_Shift_Del	DEL	CCTT	CCTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CCTT	CCTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	4409561	4409564	CCTT	-	DEL	CHAF1A	ENST00000301280	human	ensembl	74_37	+1	known	frame_shift_del	c.765_768	p.L256fs	0.006:0.007:0.000:0.000	NULL	pfam_CAF1A	-	no_errors	CHAF1A	HGNC	ENSG00000167670	tier1			62	0	0.00	32	12	27.27
CHAT	0	genome.wustl.edu	37	10	50827789	50827789	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	50827789	50827789	G	A	SNP	CHAT	ENST00000337653	human	ensembl	74_37	+1	known	missense	c.406	p.V136M	0.993	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CHAT	HGNC	ENSG00000070748	tier1	rs201479289	-	56	0	0.00	22	8	26.67
CHAT	0	genome.wustl.edu	37	10	50854670	50854670	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	50854670	50854670	G	A	SNP	CHAT	ENST00000337653	human	ensembl	74_37	+1	known	missense	c.1231	p.G411R	1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CHAT	HGNC	ENSG00000070748	tier1	-	-	65	0	0.00	31	19	37.25
CHCHD5	0	genome.wustl.edu	37	2	113346512	113346512	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	113346512	113346512	A	-	DEL	CHCHD5	ENST00000469030	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CHCHD5	HGNC	ENSG00000125611	tier1			43	0	0.00	21	20	48.78
CHD2	0	genome.wustl.edu	37	15	93521378	93521378	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	93521378	93521378	G	T	SNP	CHD2	ENST00000557340	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CHD2	HGNC	ENSG00000173575	tier1	-	-	78	0	0.00	69	4	5.48
CHD2	0	genome.wustl.edu	37	15	93528733	93528733	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	93528733	93528733	G	T	SNP	CHD2	ENST00000557381	human	ensembl	74_37	+1	putative	missense	c.3243	p.Q1081H	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD2	HGNC	ENSG00000173575	tier1	-	-	56	0	0.00	64	4	5.88
CHD3	0	genome.wustl.edu	37	17	7797811	7797811	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	7797811	7797811	G	A	SNP	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	missense	c.1154	p.C385Y	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004	tier1	-	-	73	0	0.00	37	24	39.34
CHD6	0	genome.wustl.edu	37	20	40054758	40054758	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	40054758	40054758	G	A	SNP	CHD6	ENST00000373233	human	ensembl	74_37	-1	known	silent	c.4104	p.S1368	0.999	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_BRK_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD6	HGNC	ENSG00000124177	tier1	-	-	37	0	0.00	26	15	36.59
CHD8	0	genome.wustl.edu	37	14	21899050	21899050	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	21899050	21899050	C	T	SNP	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	silent	c.753	p.Q251	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888	tier1	-	-	43	0	0.00	16	16	50.00
CHERP	0	genome.wustl.edu	37	19	16633994	16633994	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	16633994	16633994	G	-	DEL	CHERP	ENST00000546361	human	ensembl	74_37	-1	known	frame_shift_del	c.1849	p.H617fs	0.998	NULL	pfam_Surp,pfam_G_patch_dom,pfam_RNA_pol_II-bd,superfamily_Surp,superfamily_ENTH_VHS,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	CHERP	HGNC	ENSG00000085872	tier1			33	0	0.00	19	16	45.71
CHGA	0	genome.wustl.edu	37	14	93392964	93392964	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	93392964	93392964	C	T	SNP	CHGA	ENST00000216492	human	ensembl	74_37	+1	known	silent	c.108	p.I36	0.998	pfam_Granin,prints_Chromogranin_AB	pfam_Granin,prints_Chromogranin_AB	-	no_errors	CHGA	HGNC	ENSG00000100604	tier1	-	-	41	0	0.00	29	11	27.50
CHID1	0	genome.wustl.edu	37	11	893458	893458	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	893458	893458	G	T	SNP	CHID1	ENST00000323541	human	ensembl	74_37	-1	known	missense	c.760	p.L254I	0.998	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	-	no_errors	CHID1	HGNC	ENSG00000177830	tier1	-	-	150	0	0.00	65	51	43.97
CHL1	0	genome.wustl.edu	37	3	439987	439987	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	439987	439987	G	T	SNP	CHL1	ENST00000256509	human	ensembl	74_37	+1	known	nonsense	c.3172	p.E1058*	0.970	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CHL1	HGNC	ENSG00000134121	tier1	-	-	45	0	0.00	26	28	51.85
CHM	0	genome.wustl.edu	37	X	85118101	85118101	+	Splice_Site	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	85118101	85118101	T	-	DEL	CHM	ENST00000467744	human	ensembl	74_37	-1	known	splice_site_del	c.NULL	NULL	0.003	-	-	-	no_errors	CHM	HGNC	ENSG00000188419	tier1			13	0	0.00	11	5	31.25
CHPF2	0	genome.wustl.edu	37	7	150932435	150932435	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	150932435	150932435	G	C	SNP	CHPF2	ENST00000035307	human	ensembl	74_37	+1	known	missense	c.565	p.A189P	1.000	pfam_Fringe-like	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHPF2	HGNC	ENSG00000033100	tier1	-	-	57	0	0.00	27	21	42.86
CHPF2	0	genome.wustl.edu	37	7	150935268	150935268	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	150935268	150935268	G	T	SNP	CHPF2	ENST00000035307	human	ensembl	74_37	+1	known	missense	c.1820	p.C607F	1.000	pfam_Chond_GalNAc	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHPF2	HGNC	ENSG00000033100	tier1	-	-	34	0	0.00	24	4	14.29
CHPF2	0	genome.wustl.edu	37	7	150935672	150935672	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	150935672	150935672	T	C	SNP	CHPF2	ENST00000035307	human	ensembl	74_37	+1	known	missense	c.2224	p.Y742H	1.000	pfam_Chond_GalNAc	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHPF2	HGNC	ENSG00000033100	tier1	-	-	36	0	0.00	21	12	36.36
CHRD	0	genome.wustl.edu	37	3	184104414	184104414	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	184104414	184104414	G	A	SNP	CHRD	ENST00000204604	human	ensembl	74_37	+1	known	silent	c.2067	p.A689	0.000	pirsf_Chordin	pfam_CHRD,pfam_VWF_C,smart_VWF_C,smart_CHRD,pirsf_Chordin,pfscan_CHRD,pfscan_VWF_C	-	no_errors	CHRD	HGNC	ENSG00000090539	tier1	-	-	8	0	0.00	3	5	62.50
CHRM3	0	genome.wustl.edu	37	1	240072235	240072235	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	240072235	240072235	C	T	SNP	CHRM3	ENST00000255380	human	ensembl	74_37	+1	known	missense	c.1484	p.A495V	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M3_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM3	HGNC	ENSG00000133019	tier1	-	-	51	0	0.00	22	18	45.00
CHRM3	0	genome.wustl.edu	37	1	240072444	240072444	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	240072444	240072444	A	-	DEL	CHRM3	ENST00000255380	human	ensembl	74_37	+1	known	frame_shift_del	c.1693	p.K567fs	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M3_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM3	HGNC	ENSG00000133019	tier1			46	0	0.00	21	21	50.00
CHRNB2	0	genome.wustl.edu	37	1	154544175	154544175	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	154544175	154544175	C	T	SNP	CHRNB2	ENST00000368476	human	ensembl	74_37	+1	known	silent	c.876	p.L292	0.886	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB2	HGNC	ENSG00000160716	tier1	-	-	49	0	0.00	38	16	29.63
CHST12	0	genome.wustl.edu	37	7	2473033	2473033	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	2473033	2473033	C	T	SNP	CHST12	ENST00000258711	human	ensembl	74_37	+1	known	silent	c.759	p.S253	0.076	pfam_Sulfotransferase,superfamily_P-loop_NTPase	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	CHST12	HGNC	ENSG00000136213	tier1	-	-	67	0	0.00	27	25	48.08
CHST3	0	genome.wustl.edu	37	10	73768016	73768016	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	73768016	73768016	C	T	SNP	CHST3	ENST00000373115	human	ensembl	74_37	+1	known	silent	c.1227	p.H409	0.006	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST3	HGNC	ENSG00000122863	tier1	-	-	52	0	0.00	26	26	50.00
CHUK	0	genome.wustl.edu	37	10	101953783	101953783	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	101953783	101953783	T	C	SNP	CHUK	ENST00000370397	human	ensembl	74_37	-1	known	silent	c.1932	p.G644	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IKKbetaNEMObind,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	CHUK	HGNC	ENSG00000213341	tier1	-	-	64	0	0.00	57	34	37.36
CILP	0	genome.wustl.edu	37	15	65499358	65499358	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	65499358	65499358	G	A	SNP	CILP	ENST00000261883	human	ensembl	74_37	-1	known	silent	c.186	p.I62	0.065	NULL	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,superfamily_CarboxyPept-like_regulatory,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	CILP	HGNC	ENSG00000138615	tier1	-	-	81	0	0.00	33	33	50.00
CISD3	0	genome.wustl.edu	37	17	36890761	36890761	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	36890761	36890761	G	A	SNP	CISD3	ENST00000578573	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CISD3	HGNC	ENSG00000230055	tier1	-	-	11	0	0.00	8	8	50.00
CISD3	0	genome.wustl.edu	37	17	36890781	36890783	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	36890781	36890783	AAA	-	DEL	CISD3	ENST00000578573	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	CISD3	HGNC	ENSG00000230055	tier1			13	0	0.00	10	9	47.37
CLASP1	0	genome.wustl.edu	37	2	122135110	122135110	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	122135110	122135110	G	A	SNP	CLASP1	ENST00000263710	human	ensembl	74_37	-1	known	missense	c.3607	p.P1203S	1.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP1	HGNC	ENSG00000074054	tier1	-	-	51	0	0.00	31	16	34.04
CLASP1	0	genome.wustl.edu	37	2	122208519	122208519	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	122208519	122208519	G	T	SNP	CLASP1	ENST00000263710	human	ensembl	74_37	-1	known	missense	c.1493	p.A498D	1.000	pfam_CLASP_N_dom,superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP1	HGNC	ENSG00000074054	tier1	-	-	60	0	0.00	49	5	9.26
CLASRP	0	genome.wustl.edu	37	19	45567329	45567329	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	45567329	45567329	G	A	SNP	CLASRP	ENST00000221455	human	ensembl	74_37	+1	known	missense	c.965	p.R322H	0.963	NULL	pfam_SWAP_N_domain	-	no_errors	CLASRP	HGNC	ENSG00000104859	tier1	-	-	30	0	0.00	17	29	63.04
CLCN5	0	genome.wustl.edu	37	X	49806967	49806967	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	49806967	49806967	G	T	SNP	CLCN5	ENST00000376088	human	ensembl	74_37	+1	known	missense	c.59	p.S20I	1.000	NULL	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-5	-	no_errors	CLCN5	HGNC	ENSG00000171365	tier1	-	-	52	0	0.00	34	5	12.82
CLEC16A	0	genome.wustl.edu	37	16	11272291	11272291	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	11272291	11272291	C	T	SNP	CLEC16A	ENST00000409790	human	ensembl	74_37	+1	known	missense	c.2906	p.A969V	0.001	NULL	pfam_Uncharacterised_FPL	-	no_errors	CLEC16A	HGNC	ENSG00000038532	tier1	-	-	53	0	0.00	21	16	43.24
CLEC18A	0	genome.wustl.edu	37	16	69985298	69985298	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	69985298	69985298	G	0	DEL	CLEC18A	ENST00000449317	human	ensembl	74_37	+1	known	frame_shift_del	c.29	p.H12fs	0.000	NULL	pfam_CAP_domain,pfam_C-type_lectin,superfamily_CAP_domain,superfamily_C-type_lectin_fold,smart_Allrgn_V5/Tpx1,smart_EG-like_dom,smart_C-type_lectin,pfscan_EG-like_dom,pfscan_C-type_lectin,prints_Allrgn_V5/Tpx1	-	no_errors	CLEC18A	HGNC	ENSG00000157322				59	0	0.00	49	6	10.91
CLEC3B	0	genome.wustl.edu	37	3	45077350	45077350	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	45077350	45077350	C	T	SNP	CLEC3B	ENST00000296130	human	ensembl	74_37	+1	known	silent	c.543	p.N181	0.002	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC3B	HGNC	ENSG00000163815	tier1	-	-	71	0	0.00	60	4	6.25
CLEC9A	0	genome.wustl.edu	37	12	10205421	10205424	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	10205421	10205424	TTTT	-	DEL	CLEC9A	ENST00000544751	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.008:0.006	-	-	-	no_errors	CLEC9A	HGNC	ENSG00000197992	tier1			25	0	0.00	34	18	34.62
CLIC4	0	genome.wustl.edu	37	1	25124245	25124245	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	25124245	25124245	G	T	SNP	CLIC4	ENST00000374379	human	ensembl	74_37	+1	known	missense	c.85	p.G29C	1.000	superfamily_Thioredoxin-like_fold,tigrfam_Int_Cl_channel	superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_Int_Cl_channel,tigrfam_Int_Cl_channel	-	no_errors	CLIC4	HGNC	ENSG00000169504	tier1	-	-	71	0	0.00	50	37	42.53
CLIC5	0	genome.wustl.edu	37	6	45882249	45882249	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	45882249	45882249	C	T	SNP	CLIC5	ENST00000484572	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CLIC5	HGNC	ENSG00000112782	tier1	-	-	12	0	0.00	11	7	38.89
CLIP2	0	genome.wustl.edu	37	7	73790972	73790972	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	73790972	73790972	G	T	SNP	CLIP2	ENST00000223398	human	ensembl	74_37	+1	known	missense	c.2241	p.Q747H	0.969	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_t-SNARE,pfscan_CAP-Gly_domain	-	no_errors	CLIP2	HGNC	ENSG00000106665	tier1	-	-	42	0	0.00	28	20	41.67
CLK2	0	genome.wustl.edu	37	1	155232994	155232994	+	RNA	SNP	C	C	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	155232994	155232994	C	G	SNP	CLK2	ENST00000476983	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CLK2	HGNC	ENSG00000176444	tier1	-	-	32	0	0.00	24	9	27.27
CLK2	0	genome.wustl.edu	37	1	155238599	155238600	+	RNA	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	155238599	155238600	-	G	INS	CLK2	ENST00000497188	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	CLK2	HGNC	ENSG00000176444	tier1			31	0	0.00	16	7	30.43
CLN6	0	genome.wustl.edu	37	15	68500615	68500615	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	68500615	68500615	C	T	SNP	CLN6	ENST00000249806	human	ensembl	74_37	-1	known	missense	c.799	p.A267T	0.000	NULL	NULL	-	no_errors	CLN6	HGNC	ENSG00000128973	tier1	-	-	20	0	0.00	19	9	32.14
CLN8	0	genome.wustl.edu	37	8	1719218	1719218	+	RNA	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	1719218	1719218	A	T	SNP	CLN8	ENST00000524258	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	CLN8	HGNC	ENSG00000182372	tier1	-	-	27	0	0.00	29	12	29.27
CLN8	0	genome.wustl.edu	37	8	1728667	1728667	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	1728667	1728667	C	T	SNP	CLN8	ENST00000331222	human	ensembl	74_37	+1	known	silent	c.795	p.F265	0.058	NULL	pfam_TLC-dom,smart_TLC-dom,pfscan_TLC-dom	-	no_errors	CLN8	HGNC	ENSG00000182372	tier1	-	-	33	0	0.00	18	8	30.77
CLP1	0	genome.wustl.edu	37	11	57428888	57428888	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	57428888	57428888	C	T	SNP	CLP1	ENST00000525602	human	ensembl	74_37	+1	known	missense	c.1258	p.R420W	1.000	pfam_Pre-mRNA_cleavage_cplxII_Clp1	pfam_Pre-mRNA_cleavage_cplxII_Clp1,superfamily_P-loop_NTPase	-	no_errors	CLP1	HGNC	ENSG00000172409	tier1	-	-	28	0	0.00	16	13	44.83
CLPTM1L	0	genome.wustl.edu	37	5	1339037	1339037	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	1339037	1339037	C	T	SNP	CLPTM1L	ENST00000320895	human	ensembl	74_37	-1	known	missense	c.537	p.M179I	1.000	pfam_CLPTM1	pfam_CLPTM1	-	no_errors	CLPTM1L	HGNC	ENSG00000049656	tier1	-	-	58	0	0.00	61	32	34.41
CLSTN2	0	genome.wustl.edu	37	3	140123554	140123554	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	140123554	140123554	A	T	SNP	CLSTN2	ENST00000458420	human	ensembl	74_37	+1	known	missense	c.583	p.I195F	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CLSTN2	HGNC	ENSG00000158258	tier1	-	-	91	0	0.00	78	5	6.02
CLSTN3	0	genome.wustl.edu	37	12	7310095	7310095	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	7310095	7310095	C	T	SNP	CLSTN3	ENST00000266546	human	ensembl	74_37	+1	known	silent	c.2538	p.S846	0.966	NULL	pfam_Cadherin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CLSTN3	HGNC	ENSG00000139182	tier1	-	-	44	0	0.00	60	20	25.00
CLUH	0	genome.wustl.edu	37	17	2606773	2606774	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	2606773	2606774	-	G	INS	CLUH	ENST00000435359	human	ensembl	74_37	-1	known	frame_shift_ins	c.200_199	p.Q67fs	1.000:1.000	NULL	superfamily_GSKIP_dom	-	no_errors	CLUH	HGNC	ENSG00000132361	tier1			53	0	0.00	30	11	26.83
CLVS1	0	genome.wustl.edu	37	8	62212594	62212594	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	62212594	62212594	C	T	SNP	CLVS1	ENST00000325897	human	ensembl	74_37	+1	known	missense	c.208	p.R70C	1.000	pfam_CRAL/TRIO_N_dom,superfamily_CRAL/TRIO_N_dom	pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,prints_CRAL-bd_toc_tran	-	no_errors	CLVS1	HGNC	ENSG00000177182	tier1	-	-	60	0	0.00	51	17	25.00
CMC1	0	genome.wustl.edu	37	3	28357733	28357733	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	28357733	28357733	T	-	DEL	CMC1	ENST00000469102	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CMC1	HGNC	ENSG00000187118	tier1			26	0	0.00	20	15	42.86
CMYA5	0	genome.wustl.edu	37	5	79026843	79026844	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	79026843	79026844	-	CT	INS	CMYA5	ENST00000446378	human	ensembl	74_37	+1	known	frame_shift_ins	c.2255_2256	p.S756fs	0.000:0.000	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309	tier1			21	0	0.00	12	12	50.00
CNIH4	0	genome.wustl.edu	37	1	224544611	224544611	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	224544611	224544611	G	T	SNP	CNIH4	ENST00000366860	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	CNIH4	HGNC	ENSG00000143771	tier1	-	-	65	0	0.00	69	4	5.48
CNKSR1	0	genome.wustl.edu	37	1	26514777	26514778	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	26514777	26514778	-	C	INS	CNKSR1	ENST00000374253	human	ensembl	74_37	+1	known	frame_shift_ins	c.1528_1529	p.P513fs	0.000:0.000	NULL	pfam_CRIC_domain_Chordata,pfam_Pleckstrin_homology,pfam_SAM_type1,superfamily_SAM/pointed,superfamily_PDZ,smart_SAM,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_SAM	-	no_errors	CNKSR1	HGNC	ENSG00000142675	tier1			73	0	0.00	55	29	34.52
CNKSR1	0	genome.wustl.edu	37	1	26514778	26514778	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	26514778	26514778	C	-	DEL	CNKSR1	ENST00000374253	human	ensembl	74_37	+1	known	frame_shift_del	c.1529	p.P512fs	0.000	NULL	pfam_CRIC_domain_Chordata,pfam_Pleckstrin_homology,pfam_SAM_type1,superfamily_SAM/pointed,superfamily_PDZ,smart_SAM,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_SAM	-	no_errors	CNKSR1	HGNC	ENSG00000142675	tier1			73	0	0.00	59	25	29.76
CNKSR2	0	genome.wustl.edu	37	X	21627459	21627459	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	21627459	21627459	C	T	SNP	CNKSR2	ENST00000379510	human	ensembl	74_37	+1	known	missense	c.2416	p.R806W	1.000	NULL	pfam_CNKSR2,pfam_CRIC_domain_Chordata,pfam_SAM_type1,pfam_Pleckstrin_homology,pfam_SAM_2,pfam_PDZ,superfamily_SAM/pointed,superfamily_PDZ,smart_SAM,smart_PDZ,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_SAM	-	no_errors	CNKSR2	HGNC	ENSG00000149970	tier1	-	-	28	0	0.00	7	24	77.42
CNN1	0	genome.wustl.edu	37	19	11649718	11649718	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	11649718	11649718	C	-	DEL	CNN1	ENST00000588468	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.199	-	-	-	no_errors	CNN1	HGNC	ENSG00000130176	tier1			78	0	0.00	51	24	32.00
CNNM2	0	genome.wustl.edu	37	10	104679763	104679763	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	104679763	104679763	C	-	DEL	CNNM2	ENST00000369878	human	ensembl	74_37	+1	known	frame_shift_del	c.1526	p.L511fs	1.000	NULL	pfam_DUF21,superfamily_cNMP-bd-like	-	no_errors	CNNM2	HGNC	ENSG00000148842	tier1			88	0	0.00	31	36	53.73
CNOT1	0	genome.wustl.edu	37	16	58575501	58575501	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	58575501	58575501	C	A	SNP	CNOT1	ENST00000317147	human	ensembl	74_37	-1	known	missense	c.4704	p.Q1568H	1.000	NULL	pfam_CCR4-Not_Not1_C,superfamily_ARM-type_fold	-	no_errors	CNOT1	HGNC	ENSG00000125107	tier1	-	-	41	0	0.00	28	20	41.67
CNPY3	0	genome.wustl.edu	37	6	42897358	42897360	+	In_Frame_Del	DEL	TGC	TGC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TGC	TGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	42897358	42897360	TGC	-	DEL	CNPY3	ENST00000372836	human	ensembl	74_37	+1	known	in_frame_del	c.50_52	p.L21in_frame_del	0.122:0.131:0.153	NULL	pfam_DUF3456	-	no_errors	CNPY3	HGNC	ENSG00000137161	tier1			35	0	0.00	14	5	26.32
CNPY3	0	genome.wustl.edu	37	6	42905914	42905914	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	42905914	42905914	C	T	SNP	CNPY3	ENST00000372836	human	ensembl	74_37	+1	known	silent	c.582	p.C194	1.000	pfam_DUF3456	pfam_DUF3456	-	no_errors	CNPY3	HGNC	ENSG00000137161	tier1	-	-	73	0	0.00	76	5	6.17
CNTLN	0	genome.wustl.edu	37	9	17135271	17135271	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	17135271	17135271	G	-	DEL	CNTLN	ENST00000380647	human	ensembl	74_37	+1	known	frame_shift_del	c.208	p.A72fs	0.002	NULL	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459	tier1			33	0	0.00	25	10	28.57
CNTLN	0	genome.wustl.edu	37	9	17135271	17135271	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	17135271	17135271	G	T	SNP	CNTLN	ENST00000380647	human	ensembl	74_37	+1	known	missense	c.208	p.G70W	0.002	NULL	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459				33	0	0.00	20	5	14.29
CNTN2	0	genome.wustl.edu	37	1	205031075	205031075	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	205031075	205031075	C	T	SNP	CNTN2	ENST00000331830	human	ensembl	74_37	+1	known	silent	c.1056	p.G352	0.995	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN2	HGNC	ENSG00000184144	tier1	-	-	54	0	0.00	70	19	21.35
CNTN5	0	genome.wustl.edu	37	11	99827718	99827718	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	99827718	99827718	C	T	SNP	CNTN5	ENST00000279463	human	ensembl	74_37	+1	known	missense	c.854	p.T285M	1.000	smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN5	HGNC	ENSG00000149972	tier1	-	-	22	0	0.00	12	12	50.00
CNTNAP1	0	genome.wustl.edu	37	17	40844640	40844640	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	40844640	40844640	A	G	SNP	CNTNAP1	ENST00000264638	human	ensembl	74_37	+1	known	missense	c.2654	p.K885R	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP1	HGNC	ENSG00000108797				70	0	0.00	52	3	5.45
CNTNAP3	0	genome.wustl.edu	37	9	39102541	39102541	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	39102541	39102541	G	0	DEL	CNTNAP3	ENST00000297668	human	ensembl	74_37	-1	known	frame_shift_del	c.2708	p.P903fs	0.923	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP3	HGNC	ENSG00000106714				44	0	0.00	27	14	34.15
CNTRL	0	genome.wustl.edu	37	9	123935992	123935992	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	123935992	123935992	C	T	SNP	CNTRL	ENST00000238341	human	ensembl	74_37	+1	known	missense	c.6724	p.R2242C	1.000	NULL	pfam_Leu-rich_rpt,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	CNTRL	HGNC	ENSG00000119397	tier1	-	-	36	0	0.00	17	6	26.09
COBLL1	0	genome.wustl.edu	37	2	165551296	165551297	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	165551296	165551297	AA	-	DEL	COBLL1	ENST00000194871	human	ensembl	74_37	-1	known	frame_shift_del	c.2921_2920	p.L974fs	0.972:0.886	NULL	pfam_Cordon-bleu_ubiquitin_domain,pfscan_WH2_dom	-	no_errors	COBLL1	HGNC	ENSG00000082438	tier1			22	0	0.00	5	18	78.26
COL11A1	0	genome.wustl.edu	37	1	103474067	103474067	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	103474067	103474067	C	-	DEL	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	frame_shift_del	c.1671	p.P558fs	0.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718	tier1			46	0	0.00	28	18	39.13
COL11A2	0	genome.wustl.edu	37	6	33152023	33152023	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	33152023	33152023	G	T	SNP	COL11A2	ENST00000341947	human	ensembl	74_37	-1	known	missense	c.1018	p.P340T	0.910	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A2	HGNC	ENSG00000204248	tier1	-	-	51	0	0.00	49	4	7.55
COL13A1	0	genome.wustl.edu	37	10	71658500	71658500	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	71658500	71658500	A	-	DEL	COL13A1	ENST00000356340	human	ensembl	74_37	+1	known	frame_shift_del	c.762	p.R256fs	0.992	NULL	pfam_Collagen	-	no_errors	COL13A1	HGNC	ENSG00000197467	tier1			54	0	0.00	36	18	33.33
COL13A1	0	genome.wustl.edu	37	10	71697406	71697406	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	71697406	71697406	G	A	SNP	COL13A1	ENST00000356340	human	ensembl	74_37	+1	known	missense	c.1780	p.D594N	1.000	pfam_Collagen	pfam_Collagen	-	no_errors	COL13A1	HGNC	ENSG00000197467	tier1	-	-	67	0	0.00	11	13	54.17
COL14A1	0	genome.wustl.edu	37	8	121292216	121292216	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	121292216	121292216	C	T	SNP	COL14A1	ENST00000297848	human	ensembl	74_37	+1	known	missense	c.3524	p.S1175L	0.986	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Fibronectin_type3,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL14A1	HGNC	ENSG00000187955	tier1	-	-	78	0	0.00	98	43	30.50
COL21A1	0	genome.wustl.edu	37	6	56035809	56035809	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	56035809	56035809	T	-	DEL	COL21A1	ENST00000244728	human	ensembl	74_37	-1	known	frame_shift_del	c.758	p.K253fs	1.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL21A1	HGNC	ENSG00000124749	tier1			97	0	0.00	71	32	31.07
COL25A1	0	genome.wustl.edu	37	4	109773420	109773420	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	109773420	109773420	G	T	SNP	COL25A1	ENST00000399132	human	ensembl	74_37	-1	known	missense	c.1361	p.P454H	1.000	pfam_Collagen	pfam_Collagen	-	no_errors	COL25A1	HGNC	ENSG00000188517	tier1	-	-	55	0	0.00	69	4	5.48
COL27A1	0	genome.wustl.edu	37	9	116924994	116924994	+	Splice_Site	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	116924994	116924994	G	-	DEL	COL27A1	ENST00000356083	human	ensembl	74_37	+1	known	splice_site_del	c.63-1	e2-1	1.000	-	-	-	no_errors	COL27A1	HGNC	ENSG00000196739	tier1			15	0	0.00	9	5	35.71
COL3A1	0	genome.wustl.edu	37	2	189868173	189868173	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	189868173	189868173	G	T	SNP	COL3A1	ENST00000304636	human	ensembl	74_37	+1	known	missense	c.2590	p.G864C	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL3A1	HGNC	ENSG00000168542	tier1	-	-	67	0	0.00	63	6	8.70
COL4A2	0	genome.wustl.edu	37	13	111117918	111117918	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	111117918	111117918	G	T	SNP	COL4A2	ENST00000360467	human	ensembl	74_37	+1	known	missense	c.1943	p.G648V	0.554	NULL	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A2	HGNC	ENSG00000134871				47	0	0.00	50	4	7.41
COL4A5	0	genome.wustl.edu	37	X	107929267	107929267	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	107929267	107929267	C	T	SNP	COL4A5	ENST00000328300	human	ensembl	74_37	+1	known	missense	c.4223	p.T1408I	0.781	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A5	HGNC	ENSG00000188153	tier1	-	-	32	0	0.00	23	4	14.81
COL5A2	0	genome.wustl.edu	37	2	189904132	189904132	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	189904132	189904132	G	A	SNP	COL5A2	ENST00000374866	human	ensembl	74_37	-1	known	missense	c.3791	p.T1264M	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL5A2	HGNC	ENSG00000204262	tier1	-	-	103	0	0.00	53	29	35.37
COL6A2	0	genome.wustl.edu	37	21	47531407	47531407	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	47531407	47531407	G	T	SNP	COL6A2	ENST00000300527	human	ensembl	74_37	+1	known	missense	c.17	p.C6F	0.000	NULL	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A2	HGNC	ENSG00000142173	tier1	-	-	61	0	0.00	53	4	7.02
COL6A2	0	genome.wustl.edu	37	21	47532223	47532223	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	47532223	47532223	G	A	SNP	COL6A2	ENST00000300527	human	ensembl	74_37	+1	known	missense	c.446	p.R149H	0.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A2	HGNC	ENSG00000142173	tier1	rs143891262	-	19	0	0.00	7	4	36.36
COL6A3	0	genome.wustl.edu	37	2	238253013	238253013	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	238253013	238253013	G	T	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	missense	c.7648	p.Q2550K	0.866	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359				31	0	0.00	29	2	6.45
COL7A1	0	genome.wustl.edu	37	3	48616352	48616352	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	48616352	48616352	G	A	SNP	COL7A1	ENST00000328333	human	ensembl	74_37	-1	known	silent	c.5424	p.D1808	0.963	NULL	pfam_Collagen,pfam_Fibronectin_type3,pfam_VWF_A,pfam_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,superfamily_Prot_inh_Kunz-m,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL7A1	HGNC	ENSG00000114270	tier1	-	-	31	0	0.00	14	12	46.15
COL9A1	0	genome.wustl.edu	37	6	70991130	70991130	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	70991130	70991130	G	A	SNP	COL9A1	ENST00000357250	human	ensembl	74_37	-1	known	missense	c.839	p.P280L	0.974	pfam_Collagen	pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL9A1	HGNC	ENSG00000112280	tier1	-	-	42	0	0.00	17	7	29.17
COLEC10	0	genome.wustl.edu	37	8	120101974	120101974	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	120101974	120101974	A	G	SNP	COLEC10	ENST00000332843	human	ensembl	74_37	+1	known	silent	c.204	p.G68	0.489	pfam_Collagen	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	COLEC10	HGNC	ENSG00000184374	tier1	-	-	40	0	0.00	48	15	23.81
COPA	0	genome.wustl.edu	37	1	160261861	160261861	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	160261861	160261861	G	A	SNP	COPA	ENST00000368069	human	ensembl	74_37	-1	known	missense	c.3115	p.R1039C	1.000	pfam_Coatomer_asu_C,pirsf_Coatomer_asu	pfam_Coatomer_asu_C,pfam_Coatomer_WD-assoc_reg,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Coatomer_asu,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	COPA	HGNC	ENSG00000122218	tier1	-	-	50	0	0.00	55	21	27.63
COPB1	0	genome.wustl.edu	37	11	14486551	14486551	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	14486551	14486551	C	T	SNP	COPB1	ENST00000249923	human	ensembl	74_37	-1	known	silent	c.2316	p.P772	0.443	pfam_Coatomer_bsu_C,pirsf_COPB1	pfam_Coatomer_bsu_C,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_COPB1	-	no_errors	COPB1	HGNC	ENSG00000129083	tier1	-	-	46	0	0.00	22	18	45.00
COQ10B	0	genome.wustl.edu	37	2	198318518	198318518	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	198318518	198318518	T	-	DEL	COQ10B	ENST00000488445	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	COQ10B	HGNC	ENSG00000115520	tier1			36	0	0.00	19	16	45.71
CORIN	0	genome.wustl.edu	37	4	47788868	47788868	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	47788868	47788868	C	T	SNP	CORIN	ENST00000273857	human	ensembl	74_37	-1	known	missense	c.283	p.D95N	0.004	pirsf_Peptidase_S1A_corin	pirsf_Peptidase_S1A_corin,pfam_Peptidase_S1,pfam_LDrepeatLR_classA_rpt,pfam_Frizzled_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Frizzled_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_Srcr_rcpt-rel,smart_Frizzled_dom,smart_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,prints_LDrepeatLR_classA_rpt,prints_Peptidase_S1A,pfscan_Frizzled_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1	-	no_errors	CORIN	HGNC	ENSG00000145244	tier1	-	-	49	0	0.00	37	26	41.27
COX16	0	genome.wustl.edu	37	14	70793016	70793017	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	70793016	70793017	AA	-	DEL	COX16	ENST00000557612	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002:0.001	-	-	-	no_errors	COX16	HGNC	ENSG00000133983	tier1			29	0	0.00	16	21	56.76
CPB1	0	genome.wustl.edu	37	3	148558742	148558742	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	148558742	148558742	C	T	SNP	CPB1	ENST00000282957	human	ensembl	74_37	+1	known	missense	c.454	p.R152C	0.992	pfam_Peptidase_M14,smart_Peptidase_M14,prints_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPB1	HGNC	ENSG00000153002	tier1	-	-	35	0	0.00	27	14	34.15
CPEB4	0	genome.wustl.edu	37	5	173370047	173370047	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	173370047	173370047	G	T	SNP	CPEB4	ENST00000265085	human	ensembl	74_37	+1	known	missense	c.1277	p.R426M	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CPEB4	HGNC	ENSG00000113742	tier1	-	-	53	0	0.00	71	4	5.33
CPED1	0	genome.wustl.edu	37	7	120704315	120704315	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	120704315	120704315	G	A	SNP	CPED1	ENST00000310396	human	ensembl	74_37	+1	known	silent	c.564	p.Q188	1.000	NULL	NULL	-	no_errors	CPED1	HGNC	ENSG00000106034	tier1	-	-	81	0	0.00	53	32	37.21
CPLX4	0	genome.wustl.edu	37	18	56963955	56963955	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	56963955	56963955	G	A	SNP	CPLX4	ENST00000299721	human	ensembl	74_37	-1	known	missense	c.458	p.A153V	1.000	NULL	pfam_Synaphin	-	no_errors	CPLX4	HGNC	ENSG00000166569	tier1	-	-	65	0	0.00	40	21	34.43
CPNE6	0	genome.wustl.edu	37	14	24542776	24542776	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	24542776	24542776	T	-	DEL	CPNE6	ENST00000537691	human	ensembl	74_37	+1	known	frame_shift_del	c.402	p.F136fs	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE6	HGNC	ENSG00000100884	tier1			59	0	0.00	39	17	30.36
CPNE8	0	genome.wustl.edu	37	12	39047419	39047420	+	RNA	INS	-	-	AAA			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	39047419	39047420	-	AAA	INS	CPNE8	ENST00000546603	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.031:0.001	-	-	-	no_errors	CPNE8	HGNC	ENSG00000139117	tier1			35	0	0.00	54	6	10.00
CPNE8	0	genome.wustl.edu	37	12	39047419	39047420	+	RNA	INS	-	-	AAAA			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	39047419	39047420	-	AAAA	INS	CPNE8	ENST00000546603	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.031:0.001	-	-	-	no_errors	CPNE8	HGNC	ENSG00000139117	tier1			35	0	0.00	47	13	21.67
CPNE8	0	genome.wustl.edu	37	12	39079292	39079292	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	39079292	39079292	C	T	SNP	CPNE8	ENST00000331366	human	ensembl	74_37	-1	known	missense	c.1271	p.R424K	1.000	pfam_Copine,smart_VWF_A,pfscan_VWF_A	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE8	HGNC	ENSG00000139117	tier1	-	-	91	0	0.00	43	34	44.16
CPNE9	0	genome.wustl.edu	37	3	9768856	9768856	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	9768856	9768856	C	T	SNP	CPNE9	ENST00000383832	human	ensembl	74_37	+1	known	missense	c.1462	p.R488W	1.000	smart_VWF_A,pfscan_VWF_A	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE9	HGNC	ENSG00000144550	tier1	-	-	63	0	0.00	33	18	34.62
CPSF1	0	genome.wustl.edu	37	8	145621896	145621898	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	145621896	145621898	CTT	-	DEL	CPSF1	ENST00000349769	human	ensembl	74_37	-1	known	in_frame_del	c.2743_2741	p.E914in_frame_del	1.000:0.999:1.000	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894	tier1			39	0	0.00	34	12	26.09
CPSF6	0	genome.wustl.edu	37	12	69650552	69650552	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	69650552	69650552	T	A	SNP	CPSF6	ENST00000266679	human	ensembl	74_37	+1	known	missense	c.450	p.H150Q	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CPSF6	HGNC	ENSG00000111605	tier1	-	-	79	0	0.00	45	48	51.61
CPT1B	0	genome.wustl.edu	37	22	51010669	51010669	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	51010669	51010669	G	A	SNP	CPT1B	ENST00000312108	human	ensembl	74_37	-1	known	missense	c.1421	p.A474V	0.994	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT1B	HGNC	ENSG00000205560	tier1	-	-	27	0	0.00	16	13	44.83
CR1	0	genome.wustl.edu	37	1	207787753	207787753	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	207787753	207787753	C	T	SNP	CR1	ENST00000367049	human	ensembl	74_37	+1	known	nonsense	c.6580	p.R2194*	0.477	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1	HGNC	ENSG00000203710	tier1	rs55749440	-	176	0	0.00	230	41	15.13
CR2	0	genome.wustl.edu	37	1	207642015	207642018	+	Frame_Shift_Del	DEL	TGTT	TGTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TGTT	TGTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	207642015	207642018	TGTT	-	DEL	CR2	ENST00000367057	human	ensembl	74_37	+1	known	frame_shift_del	c.589_592	p.S199fs	0.960:0.990:0.985:0.986	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR2	HGNC	ENSG00000117322	tier1			127	0	0.00	97	30	23.62
CRB1	0	genome.wustl.edu	37	1	197390734	197390734	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	197390734	197390734	C	T	SNP	CRB1	ENST00000367400	human	ensembl	74_37	+1	known	silent	c.1776	p.I592	0.002	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_EG-like_dom,pfam_Laminin_G,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	CRB1	HGNC	ENSG00000134376				29	0	0.00	38	2	5.00
CRCT1	0	genome.wustl.edu	37	1	152488094	152488094	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	152488094	152488094	G	-	DEL	CRCT1	ENST00000368790	human	ensembl	74_37	+1	known	frame_shift_del	c.235	p.G80fs	0.677	NULL	NULL	-	no_errors	CRCT1	HGNC	ENSG00000169509	tier1			14	0	0.00	12	9	42.86
CREBBP	0	genome.wustl.edu	37	16	3828084	3828085	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	3828084	3828085	-	C	INS	CREBBP	ENST00000262367	human	ensembl	74_37	-1	known	frame_shift_ins	c.2041_2040	p.N680fs	1.000:1.000	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339	tier1			95	0	0.00	77	30	28.04
CRMP1	0	genome.wustl.edu	37	4	5843033	5843033	+	Splice_Site	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	5843033	5843033	A	G	SNP	CRMP1	ENST00000324989	human	ensembl	74_37	-1	known	splice_site	c.1153+2	e8+2	1.000	-	-	-	no_errors	CRMP1	HGNC	ENSG00000072832				10	0	0.00	7	3	30.00
CROCC	0	genome.wustl.edu	37	1	17297165	17297165	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	17297165	17297165	C	T	SNP	CROCC	ENST00000375541	human	ensembl	74_37	+1	known	missense	c.5687	p.T1896I	0.947	NULL	superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CROCC	HGNC	ENSG00000058453	tier1	-	-	54	0	0.00	25	22	46.81
CROCCP3	0	genome.wustl.edu	37	1	16809912	16809912	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	16809912	16809912	C	T	SNP	CROCCP3	ENST00000263511	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	CROCCP3	HGNC	ENSG00000080947	tier1	-	-	163	0	0.00	91	41	31.06
CRY2	0	genome.wustl.edu	37	11	45891125	45891125	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	45891125	45891125	G	T	SNP	CRY2	ENST00000443527	human	ensembl	74_37	+1	known	silent	c.1014	p.T338	0.986	pfam_Photolyase_FAD-bd/Cryptochr_C,superfamily_Photolyase_FAD-bd/Cryptochr_C	pfam_Photolyase_FAD-bd/Cryptochr_C,pfam_DNA_photolyase_N,superfamily_Photolyase_FAD-bd/Cryptochr_C,superfamily_DNA_photolyase_N	-	no_errors	CRY2	HGNC	ENSG00000121671				73	0	0.00	38	2	5.00
CRYAA	0	genome.wustl.edu	37	21	44589921	44589922	+	Frame_Shift_Del	DEL	CC	CC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	44589921	44589922	CC	-	DEL	CRYAA	ENST00000398133	human	ensembl	74_37	+1	putative	frame_shift_del	c.87_88	p.H33fs	0.026:0.029	superfamily_HSP20-like_chaperone	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	-	no_errors	CRYAA	HGNC	ENSG00000160202	tier1			32	0	0.00	33	25	43.10
CRYAB	0	genome.wustl.edu	37	11	111779648	111779648	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	111779648	111779648	C	T	SNP	CRYAB	ENST00000227251	human	ensembl	74_37	-1	known	missense	c.368	p.R123Q	1.000	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	pfam_Alpha-crystallin_N,pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	-	no_errors	CRYAB	HGNC	ENSG00000109846	tier1	-	-	56	0	0.00	24	19	44.19
CRYBA4	0	genome.wustl.edu	37	22	27024395	27024395	+	Splice_Site	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	27024395	27024395	G	A	SNP	CRYBA4	ENST00000354760	human	ensembl	74_37	+1	known	splice_site	c.443+1	e4+1	1.000	-	-	-	no_errors	CRYBA4	HGNC	ENSG00000196431				21	0	0.00	18	6	25.00
CRYBG3	0	genome.wustl.edu	37	3	97596787	97596787	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	97596787	97596787	A	-	DEL	CRYBG3	ENST00000182096	human	ensembl	74_37	+1	known	frame_shift_del	c.905	p.G304fs	1.000	NULL	pfam_Beta/gamma_crystallin,pfam_Ricin_B_lectin,superfamily_G_crystallin-rel,superfamily_Ricin_B_lectin,smart_Beta/gamma_crystallin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBG3	HGNC	ENSG00000080200	tier1			44	0	0.00	36	16	30.77
CSDE1	0	genome.wustl.edu	37	1	115292534	115292534	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	115292534	115292534	A	-	DEL	CSDE1	ENST00000524652	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CSDE1	HGNC	ENSG00000009307	tier1			53	0	0.00	22	18	45.00
CSF2RA	0	genome.wustl.edu	37	X	1428554	1428554	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	1428554	1428554	C	T	SNP	CSF2RA	ENST00000498153	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.053	-	-	-	no_errors	CSF2RA	HGNC	ENSG00000198223	tier1	-	-	33	0	0.00	17	22	56.41
CSF2RB	0	genome.wustl.edu	37	22	37328884	37328884	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	37328884	37328884	C	T	SNP	CSF2RB	ENST00000262825	human	ensembl	74_37	+1	known	nonsense	c.1108	p.R370*	0.000	pirsf_IL3_rcpt_beta,pfam_Fibronectin_type3,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_IL3_rcpt_beta,pfam_Fibronectin_type3,pfam_IL-6_rcpt_alpha-bd,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	CSF2RB	HGNC	ENSG00000100368	tier1	-	-	44	0	0.00	19	19	50.00
CSF3R	0	genome.wustl.edu	37	1	36938156	36938156	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	36938156	36938156	G	A	SNP	CSF3R	ENST00000373103	human	ensembl	74_37	-1	known	missense	c.805	p.R269C	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_IgC2-like_lig-bd,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	CSF3R	HGNC	ENSG00000119535	tier1	-	-	78	0	0.00	35	23	39.66
CSH2	0	genome.wustl.edu	37	17	61949908	61949908	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	61949908	61949908	G	T	SNP	CSH2	ENST00000336844	human	ensembl	74_37	-1	known	missense	c.485	p.P162H	0.001	superfamily_4_helix_cytokine-like_core	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	CSH2	HGNC	ENSG00000213218	tier1	-	-	96	0	0.00	87	5	5.43
CSMD2	0	genome.wustl.edu	37	1	34011768	34011768	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	34011768	34011768	C	T	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	missense	c.8969	p.R2990H	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	tier1	-	-	33	0	0.00	25	9	26.47
CSMD2	0	genome.wustl.edu	37	1	34190222	34190222	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	34190222	34190222	C	T	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	missense	c.2779	p.A927T	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	tier1	-	-	54	0	0.00	14	8	36.36
CSMD3	0	genome.wustl.edu	37	8	113241029	113241029	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	113241029	113241029	A	-	DEL	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	frame_shift_del	c.10920	p.F3640fs	1.000	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1			36	0	0.00	39	9	18.75
CSMD3	0	genome.wustl.edu	37	8	113349856	113349856	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	113349856	113349856	C	A	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	nonsense	c.6757	p.G2253*	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	39	0	0.00	45	15	25.00
CSNK1A1	0	genome.wustl.edu	37	5	148875308	148875311	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	148875308	148875311	AAAA	-	DEL	CSNK1A1	ENST00000412431	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.004:0.004:0.004	-	-	-	no_errors	CTB-89H12.4	Clone_based_vega_gene	ENSG00000230551	tier1			26	0	0.00	23	6	20.69
CSNK1G2-AS1	0	genome.wustl.edu	37	19	1954179	1954179	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	1954179	1954179	G	T	SNP	CSNK1G2-AS1	ENST00000314315	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CSNK1G2-AS1	HGNC	ENSG00000180846	tier1	-	-	51	0	0.00	41	6	12.77
CSRNP3	0	genome.wustl.edu	37	2	166535346	166535346	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	166535346	166535346	C	T	SNP	CSRNP3	ENST00000314499	human	ensembl	74_37	+1	known	nonsense	c.841	p.R281*	1.000	NULL	prints_Cys/Ser-rich_nuc_prot	-	no_errors	CSRNP3	HGNC	ENSG00000178662	tier1	-	-	53	0	0.00	28	32	53.33
CTBP2	0	genome.wustl.edu	37	10	126692022	126692022	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	126692022	126692022	C	T	SNP	CTBP2	ENST00000309035	human	ensembl	74_37	-1	known	missense	c.1718	p.R573H	1.000	NULL	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom	-	no_errors	CTBP2	HGNC	ENSG00000175029	tier1	-	-	198	0	0.00	93	65	40.88
CTBS	0	genome.wustl.edu	37	1	85020568	85020568	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	85020568	85020568	T	-	DEL	CTBS	ENST00000477677	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CTBS	HGNC	ENSG00000117151	tier1			17	0	0.00	18	6	25.00
CTC1	0	genome.wustl.edu	37	17	8132624	8132624	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	8132624	8132624	C	T	SNP	CTC1	ENST00000315684	human	ensembl	74_37	-1	known	missense	c.3152	p.R1051Q	0.236	NULL	NULL	-	no_errors	CTC1	HGNC	ENSG00000178971	tier1	-	-	63	0	0.00	29	32	52.46
CTDP1	0	genome.wustl.edu	37	18	77496373	77496373	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	77496373	77496373	G	T	SNP	CTDP1	ENST00000299543	human	ensembl	74_37	+1	known	nonsense	c.2599	p.E867*	1.000	pfam_FCP1_C	pfam_FCP1_C,pfam_NIF,superfamily_HAD-like_dom,superfamily_BRCT_dom,superfamily_Single_hybrid_motif,smart_NIF,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_NIF,tigrfam_FCP1_euk	-	no_errors	CTDP1	HGNC	ENSG00000060069	tier1	-	-	35	0	0.00	47	6	11.32
CTNNA2	0	genome.wustl.edu	37	2	80085237	80085237	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	80085237	80085237	G	A	SNP	CTNNA2	ENST00000361291	human	ensembl	74_37	+1	known	missense	c.499	p.A167T	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA2	HGNC	ENSG00000066032	tier1	-	-	51	0	0.00	26	15	34.88
CTNS	0	genome.wustl.edu	37	17	3559997	3559997	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	3559997	3559997	G	A	SNP	CTNS	ENST00000381870	human	ensembl	74_37	+1	known	missense	c.589	p.G197R	0.998	tigrfam_LC_transporter	smart_CTNS,tigrfam_LC_transporter	-	no_errors	CTNS	HGNC	ENSG00000040531	tier1	rs113994207	-	44	0	0.00	26	14	35.00
CTPS1	0	genome.wustl.edu	37	1	41462979	41462979	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	41462979	41462979	T	-	DEL	CTPS1	ENST00000486889	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	CTPS1	HGNC	ENSG00000171793	tier1			93	0	0.00	46	39	45.88
CTTNBP2NL	0	genome.wustl.edu	37	1	112999451	112999451	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	112999451	112999451	G	A	SNP	CTTNBP2NL	ENST00000271277	human	ensembl	74_37	+1	known	missense	c.1337	p.G446D	1.000	NULL	pfam_Cortactin-binding_p2_N	-	no_errors	CTTNBP2NL	HGNC	ENSG00000143079	tier1	-	-	21	0	0.00	26	15	36.59
CUBN	0	genome.wustl.edu	37	10	16990497	16990497	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	16990497	16990497	G	A	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.5189	p.T1730M	0.000	superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611	tier1	rs201958183	-	69	0	0.00	19	14	42.42
CUBN	0	genome.wustl.edu	37	10	17165597	17165597	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	17165597	17165597	G	-	DEL	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	frame_shift_del	c.479	p.P160fs	0.470	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611	tier1			35	0	0.00	19	5	20.83
CUL2	0	genome.wustl.edu	37	10	35360127	35360127	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	35360127	35360127	G	A	SNP	CUL2	ENST00000537177	human	ensembl	74_37	-1	known	missense	c.176	p.S59L	1.000	pfam_Cullin_N,superfamily_Cullin_repeat-like_dom	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL2	HGNC	ENSG00000108094	tier1	-	-	41	0	0.00	20	23	53.49
CUL4B	0	genome.wustl.edu	37	X	119666201	119666201	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	119666201	119666201	A	-	DEL	CUL4B	ENST00000497616	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.026	-	-	-	no_errors	CUL4B	HGNC	ENSG00000158290	tier1			9	0	0.00	6	8	57.14
CUX2	0	genome.wustl.edu	37	12	111749924	111749924	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	111749924	111749924	C	T	SNP	CUX2	ENST00000261726	human	ensembl	74_37	+1	known	missense	c.1921	p.R641C	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_Prefoldin,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX2	HGNC	ENSG00000111249	tier1	-	-	25	0	0.00	17	8	32.00
CWC27	0	genome.wustl.edu	37	5	64181325	64181326	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	64181325	64181326	-	A	INS	CWC27	ENST00000381070	human	ensembl	74_37	+1	known	frame_shift_ins	c.994_995	p.V335fs	1.000:1.000	NULL	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	CWC27	HGNC	ENSG00000153015	tier1			40	0	0.00	34	12	26.09
CWF19L1	0	genome.wustl.edu	37	10	101992924	101992925	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	101992924	101992925	AA	-	DEL	CWF19L1	ENST00000468709	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.167:0.180	-	-	-	no_errors	CWF19L1	HGNC	ENSG00000095485	tier1			15	0	0.00	9	7	43.75
CWF19L2	0	genome.wustl.edu	37	11	107200652	107200652	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	107200652	107200652	A	T	SNP	CWF19L2	ENST00000282251	human	ensembl	74_37	-1	known	missense	c.2533	p.F845I	1.000	pfam_Cwf19-like_C_dom-2	pfam_Cwf19-like_C_dom-1,pfam_Cwf19-like_C_dom-2,superfamily_HIT-like	-	no_errors	CWF19L2	HGNC	ENSG00000152404	tier1	-	-	68	0	0.00	39	36	48.00
CWF19L2	0	genome.wustl.edu	37	11	107299560	107299560	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	107299560	107299560	T	-	DEL	CWF19L2	ENST00000282251	human	ensembl	74_37	-1	known	frame_shift_del	c.1398	p.E467fs	0.186	NULL	pfam_Cwf19-like_C_dom-1,pfam_Cwf19-like_C_dom-2,superfamily_HIT-like	-	no_errors	CWF19L2	HGNC	ENSG00000152404	tier1			115	0	0.00	60	40	40.00
CXADRP3	0	genome.wustl.edu	37	18	14478362	14478362	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	14478362	14478362	G	A	SNP	CXADRP3	ENST00000581457	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CXADRP3	HGNC	ENSG00000265766	tier1	-	-	54	0	0.00	29	16	35.56
CXCL16	0	genome.wustl.edu	37	17	4637776	4637777	+	Splice_Site	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	4637776	4637777	-	A	INS	CXCL16	ENST00000293778	human	ensembl	74_37	-1	known	splice_site_ins	c.822-3_4	e6-2	0.001:0.000	-	-	-	no_errors	CXCL16	HGNC	ENSG00000161921	tier1			32	0	0.00	26	7	21.21
CXXC4	0	genome.wustl.edu	37	4	105393330	105393332	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	105393330	105393332	TTT	-	DEL	CXXC4	ENST00000466963	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.073:0.076:0.062	-	-	-	no_errors	CXXC4	HGNC	ENSG00000168772	tier1			38	0	0.00	28	13	31.71
CYB5R3	0	genome.wustl.edu	37	22	43040443	43040443	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	43040443	43040443	G	A	SNP	CYB5R3	ENST00000361740	human	ensembl	74_37	-1	known	missense	c.73	p.R25C	0.025	NULL	pfam_OxRdtase_FAD-bd_dom,pfam_OxRdtase_FAD/NAD-bd,superfamily_Riboflavin_synthase-like_b-brl,prints_NADH-Cyt_B5_reductase,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase	-	no_errors	CYB5R3	HGNC	ENSG00000100243	tier1	-	-	66	0	0.00	42	21	33.33
CYFIP1	0	genome.wustl.edu	37	15	22945143	22945144	+	Frame_Shift_Del	DEL	GC	GC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	22945143	22945144	GC	-	DEL	CYFIP1	ENST00000313077	human	ensembl	74_37	+1	known	frame_shift_del	c.1214_1215	p.H407fs	1.000:0.996	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub	pfam_Cytoplasmic_FMR1-int,pirsf_Cytoplasmic_FMR1-int_sub,prints_Cytoplasmic_FMR1-int	-	no_errors	CYFIP1	HGNC	ENSG00000068793	tier1			31	0	0.00	15	11	42.31
CYFIP2	0	genome.wustl.edu	37	5	156786063	156786063	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	156786063	156786063	G	T	SNP	CYFIP2	ENST00000442283	human	ensembl	74_37	+1	known	missense	c.577	p.G193W	1.000	pfam_Cytoplasmic_FMR1-int,superfamily_Chemokine_IL8-like_dom	pfam_Cytoplasmic_FMR1-int,superfamily_Chemokine_IL8-like_dom	-	no_errors	CYFIP2	HGNC	ENSG00000055163	tier1	-	-	84	0	0.00	76	4	5.00
CYGB	0	genome.wustl.edu	37	17	74524670	74524670	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	74524670	74524670	G	A	SNP	CYGB	ENST00000293230	human	ensembl	74_37	-1	known	missense	c.563	p.S188L	0.879	NULL	pfam_Globin,superfamily_Globin-like,pfscan_Globin,prints_Globin_lamprey/hagfish,prints_Myoglobin	-	no_errors	CYGB	HGNC	ENSG00000161544	tier1	-	-	85	0	0.00	40	24	37.50
CYP11B2	0	genome.wustl.edu	37	8	143994741	143994741	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	143994741	143994741	C	T	SNP	CYP11B2	ENST00000323110	human	ensembl	74_37	-1	known	missense	c.1081	p.E361K	0.961	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP11B2	HGNC	ENSG00000179142	tier1	rs202173105	-	79	0	0.00	52	22	29.73
CYP11B2	0	genome.wustl.edu	37	8	143995767	143995767	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	143995767	143995767	G	A	SNP	CYP11B2	ENST00000323110	human	ensembl	74_37	-1	known	silent	c.867	p.I289	0.972	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP11B2	HGNC	ENSG00000179142	tier1	-	-	76	0	0.00	68	25	26.88
CYP24A1	0	genome.wustl.edu	37	20	52782309	52782309	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	52782309	52782309	G	T	SNP	CYP24A1	ENST00000216862	human	ensembl	74_37	-1	known	missense	c.704	p.A235D	0.981	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_CYP24A_mit,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	-	no_errors	CYP24A1	HGNC	ENSG00000019186	tier1	-	-	54	0	0.00	38	5	11.63
CYP2C9	0	genome.wustl.edu	37	10	96740985	96740985	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	96740985	96740985	G	T	SNP	CYP2C9	ENST00000260682	human	ensembl	74_37	+1	known	missense	c.1007	p.S336I	0.928	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2C9	HGNC	ENSG00000138109				92	0	0.00	76	4	5.00
CYP2U1	0	genome.wustl.edu	37	4	108866275	108866275	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	108866275	108866275	G	A	SNP	CYP2U1	ENST00000332884	human	ensembl	74_37	+1	known	missense	c.640	p.G214R	0.996	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B,prints_Cyt_P450_E_grp-I_CYP2D-like	-	no_errors	CYP2U1	HGNC	ENSG00000155016	tier1	-	-	54	0	0.00	32	19	37.25
CYP46A1	0	genome.wustl.edu	37	14	100182232	100182232	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	100182232	100182232	G	A	SNP	CYP46A1	ENST00000261835	human	ensembl	74_37	+1	known	missense	c.779	p.R260H	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP46A1	HGNC	ENSG00000036530	tier1	-	-	64	0	0.00	35	27	43.55
CYP4Z1	0	genome.wustl.edu	37	1	47534379	47534379	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	47534379	47534379	C	T	SNP	CYP4Z1	ENST00000334194	human	ensembl	74_37	+1	known	missense	c.263	p.T88M	0.017	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4Z1	HGNC	ENSG00000186160	tier1	-	-	158	0	0.00	87	58	40.00
DAAM2	0	genome.wustl.edu	37	6	39869234	39869234	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	39869234	39869234	C	T	SNP	DAAM2	ENST00000274867	human	ensembl	74_37	+1	known	missense	c.2968	p.R990C	1.000	smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DAAM2	HGNC	ENSG00000146122	tier1	-	-	13	0	0.00	9	4	30.77
DAB2IP	0	genome.wustl.edu	37	9	124530759	124530759	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	124530759	124530759	G	T	SNP	DAB2IP	ENST00000408936	human	ensembl	74_37	+1	known	missense	c.1746	p.E582D	1.000	superfamily_Rho_GTPase_activation_prot,smart_RasGAP	pfam_DUF3498,pfam_RasGAP,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	DAB2IP	HGNC	ENSG00000136848	tier1	-	-	45	0	0.00	46	4	8.00
DAOA-AS1	0	genome.wustl.edu	37	13	106118696	106118697	+	RNA	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	106118696	106118697	-	T	INS	DAOA-AS1	ENST00000448407	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	DAOA-AS1	HGNC	ENSG00000232307	tier1			115	0	0.00	110	26	19.12
DAPK1	0	genome.wustl.edu	37	9	90321801	90321802	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	90321801	90321802	-	G	INS	DAPK1	ENST00000469640	human	ensembl	74_37	+1	known	frame_shift_ins	c.3890_3891	p.Y1300fs	1.000:1.000	NULL	pfam_Prot_kinase_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730	tier1			43	0	0.00	14	8	36.36
DBH	0	genome.wustl.edu	37	9	136507451	136507451	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	136507451	136507451	C	T	SNP	DBH	ENST00000393056	human	ensembl	74_37	+1	known	silent	c.609	p.P203	0.007	superfamily_PHM/PNGase_F_dom	pfam_Cu2_ascorb_mOase_N,pfam_DOMON_domain,superfamily_PHM/PNGase_F_dom,smart_DOMON_domain,pfscan_DOMON_domain,prints_Dopamine_b_mOase	-	no_errors	DBH	HGNC	ENSG00000123454	tier1	-	-	85	0	0.00	43	34	44.16
DBX1	0	genome.wustl.edu	37	11	20177882	20177882	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	20177882	20177882	G	A	SNP	DBX1	ENST00000227256	human	ensembl	74_37	-1	known	missense	c.1027	p.R343W	0.583	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	DBX1	HGNC	ENSG00000109851	tier1	-	-	50	0	0.00	18	24	57.14
DCAF12L1	0	genome.wustl.edu	37	X	125686220	125686220	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	125686220	125686220	G	A	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	silent	c.372	p.D124	0.996	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889	tier1	-	-	48	0	0.00	10	31	75.61
DCAF4	0	genome.wustl.edu	37	14	73407001	73407001	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	73407001	73407001	C	-	DEL	DCAF4	ENST00000358377	human	ensembl	74_37	+1	known	frame_shift_del	c.267	p.L91fs	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4	HGNC	ENSG00000119599	tier1			74	0	0.00	59	7	10.61
DCAF6	0	genome.wustl.edu	37	1	168032896	168032896	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	168032896	168032896	C	T	SNP	DCAF6	ENST00000367840	human	ensembl	74_37	+1	known	missense	c.2338	p.R780W	0.999	superfamily_WD40_repeat_dom,pfscan_IQ_motif_EF-hand-BS	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_IQ_motif_EF-hand-BS,pfscan_WD40_repeat_dom	-	no_errors	DCAF6	HGNC	ENSG00000143164	tier1	-	-	18	0	0.00	33	11	25.00
DCAF6	0	genome.wustl.edu	37	1	168034905	168034905	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	168034905	168034905	G	A	SNP	DCAF6	ENST00000367840	human	ensembl	74_37	+1	known	silent	c.2517	p.R839	0.993	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_IQ_motif_EF-hand-BS,pfscan_WD40_repeat_dom	-	no_errors	DCAF6	HGNC	ENSG00000143164	tier1	-	-	29	0	0.00	62	4	6.06
DCAF7	0	genome.wustl.edu	37	17	61667770	61667770	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	61667770	61667770	A	-	DEL	DCAF7	ENST00000577702	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DCAF7	HGNC	ENSG00000136485	tier1			89	0	0.00	50	32	39.02
DCAF8	0	genome.wustl.edu	37	1	160209917	160209917	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	160209917	160209917	C	T	SNP	DCAF8	ENST00000608310	human	ensembl	74_37	-1	known	missense	c.755	p.R252H	0.997	NULL	pfam_Pex19,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF8	HGNC	ENSG00000132716	tier1	-	-	59	0	0.00	35	17	32.69
DCAKD	0	genome.wustl.edu	37	17	43107517	43107518	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	43107517	43107518	-	G	INS	DCAKD	ENST00000342350	human	ensembl	74_37	-1	known	frame_shift_ins	c.347_346	p.L116fs	1.000:1.000	pfam_Depp_CoAkinase,superfamily_P-loop_NTPase,tigrfam_Depp_CoAkinase	pfam_Depp_CoAkinase,superfamily_P-loop_NTPase,tigrfam_Depp_CoAkinase	-	no_errors	DCAKD	HGNC	ENSG00000172992	tier1			124	0	0.00	86	45	34.35
DCHS2	0	genome.wustl.edu	37	4	155411314	155411314	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	155411314	155411314	G	A	SNP	DCHS2	ENST00000339452	human	ensembl	74_37	-1	known	silent	c.1194	p.R398	0.961	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410	tier1	-	-	39	0	0.00	17	12	41.38
DCLK2	0	genome.wustl.edu	37	4	151177234	151177234	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	151177234	151177234	G	C	SNP	DCLK2	ENST00000302176	human	ensembl	74_37	+1	known	missense	c.2187	p.R729S	0.010	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK2	HGNC	ENSG00000170390	tier1	-	-	54	0	0.00	40	29	42.03
DCLK3	0	genome.wustl.edu	37	3	36756896	36756896	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	36756896	36756896	G	T	SNP	DCLK3	ENST00000416516	human	ensembl	74_37	-1	known	silent	c.1870	p.R624	0.002	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK3	HGNC	ENSG00000163673				54	0	0.00	42	3	6.67
DCLRE1C	0	genome.wustl.edu	37	10	14951099	14951101	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	14951099	14951101	CTT	-	DEL	DCLRE1C	ENST00000378278	human	ensembl	74_37	-1	known	in_frame_del	c.1387_1385	p.E462in_frame_del	0.001:0.990:1.000	NULL	pfam_DRMBL	-	no_errors	DCLRE1C	HGNC	ENSG00000152457	tier1			56	0	0.00	30	12	28.57
DCP1A	0	genome.wustl.edu	37	3	53381515	53381517	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	53381515	53381517	CTC	-	DEL	DCP1A	ENST00000607628	human	ensembl	74_37	-1	known	in_frame_del	c.30_28	p.E10in_frame_del	1.000:1.000:1.000	pfam_DCP1	pfam_DCP1	-	no_errors	DCP1A	HGNC	ENSG00000162290	tier1			34	0	0.00	36	11	23.40
DCSTAMP	0	genome.wustl.edu	37	8	105367351	105367351	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	105367351	105367351	A	-	DEL	DCSTAMP	ENST00000297581	human	ensembl	74_37	+1	known	frame_shift_del	c.1276	p.R428fs	0.229	superfamily_ABC1_TM_dom	pfam_DC_STAMP-like,superfamily_ABC1_TM_dom	-	no_errors	DCSTAMP	HGNC	ENSG00000164935	tier1			27	0	0.00	16	6	27.27
DCTN6	0	genome.wustl.edu	37	8	30036928	30036928	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	30036928	30036928	C	A	SNP	DCTN6	ENST00000523666	human	ensembl	74_37	+1	known	missense	c.199	p.P67T	0.999	NULL	superfamily_Trimer_LpxA-like	-	no_errors	DCTN6	HGNC	ENSG00000104671	tier1	-	-	74	0	0.00	81	23	21.70
DCUN1D5	0	genome.wustl.edu	37	11	102935036	102935036	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	102935036	102935036	G	A	SNP	DCUN1D5	ENST00000260247	human	ensembl	74_37	-1	known	missense	c.626	p.A209V	1.000	pfam_PONY_dom	pfam_PONY_dom	-	no_errors	DCUN1D5	HGNC	ENSG00000137692	tier1	-	-	23	0	0.00	20	11	35.48
DDAH1	0	genome.wustl.edu	37	1	85787205	85787205	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	85787205	85787205	G	T	SNP	DDAH1	ENST00000284031	human	ensembl	74_37	-1	known	missense	c.788	p.S263Y	1.000	pfam_Amidino_trans	pfam_Amidino_trans	-	no_errors	DDAH1	HGNC	ENSG00000153904	tier1	-	-	78	0	0.00	58	4	6.45
DDC	0	genome.wustl.edu	37	7	50544324	50544324	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	50544324	50544324	G	A	SNP	DDC	ENST00000357936	human	ensembl	74_37	-1	known	missense	c.1039	p.R347W	1.000	pfam_PyrdxlP-dep_de-COase,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,pfam_ArAA_b-elim_lyase/Thr_aldolase,superfamily_PyrdxlP-dep_Trfase,prints_Aromatic_deC	-	no_errors	DDC	HGNC	ENSG00000132437				11	0	0.00	1	3	75.00
DDHD1	0	genome.wustl.edu	37	14	53570518	53570518	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	53570518	53570518	G	T	SNP	DDHD1	ENST00000323669	human	ensembl	74_37	-1	known	missense	c.895	p.P299T	1.000	NULL	pfam_DDHD,pfscan_DDHD	-	no_errors	DDHD1	HGNC	ENSG00000100523	tier1	-	-	49	0	0.00	63	4	5.97
DDR2	0	genome.wustl.edu	37	1	162748376	162748376	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	162748376	162748376	T	C	SNP	DDR2	ENST00000367921	human	ensembl	74_37	+1	known	missense	c.2290	p.F764L	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	DDR2	HGNC	ENSG00000162733	tier1	-	-	98	0	0.00	99	28	21.88
DDX19A	0	genome.wustl.edu	37	16	70405395	70405395	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	70405395	70405395	G	T	SNP	DDX19A	ENST00000302243	human	ensembl	74_37	+1	known	missense	c.1304	p.R435M	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX19A	HGNC	ENSG00000168872	tier1	-	-	32	0	0.00	14	15	51.72
DDX23	0	genome.wustl.edu	37	12	49230537	49230537	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	49230537	49230537	G	T	SNP	DDX23	ENST00000308025	human	ensembl	74_37	-1	known	missense	c.1051	p.R351S	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX23	HGNC	ENSG00000174243				45	0	0.00	43	3	6.52
DDX3X	0	genome.wustl.edu	37	X	41192965	41192965	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	41192965	41192965	A	G	SNP	DDX3X	ENST00000478993	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	DDX3X	HGNC	ENSG00000215301	tier1	-	-	11	0	0.00	3	5	62.50
DDX3X	0	genome.wustl.edu	37	X	41201775	41201775	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	41201775	41201775	C	T	SNP	DDX3X	ENST00000399959	human	ensembl	74_37	+1	known	silent	c.312	p.Y104	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX3X	HGNC	ENSG00000215301	tier1	-	-	48	0	0.00	12	37	75.51
DDX3Y	0	genome.wustl.edu	37	Y	15026659	15026661	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	Y	15026659	15026661	TTT	-	DEL	DDX3Y	ENST00000472510	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001:0.000:0.000	-	-	-	no_errors	DDX3Y	HGNC	ENSG00000067048	tier1			21	0	0.00	6	7	53.85
DDX5	0	genome.wustl.edu	37	17	62496720	62496720	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	62496720	62496720	G	T	SNP	DDX5	ENST00000225792	human	ensembl	74_37	-1	known	missense	c.1388	p.A463D	1.000	pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_P68HR,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX5	HGNC	ENSG00000108654	tier1	-	-	67	0	0.00	70	4	5.41
DDX59	0	genome.wustl.edu	37	1	200619669	200619669	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	200619669	200619669	G	A	SNP	DDX59	ENST00000331314	human	ensembl	74_37	-1	known	missense	c.1198	p.H400Y	1.000	superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Znf_HIT,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX59	HGNC	ENSG00000118197	tier1	-	-	63	0	0.00	59	27	31.03
DEDD	0	genome.wustl.edu	37	1	161091815	161091818	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	161091815	161091818	AAAA	-	DEL	DEDD	ENST00000486041	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000:1.000:1.000	-	-	-	no_errors	DEDD	HGNC	ENSG00000158796	tier1			11	0	0.00	14	6	30.00
DEDD	0	genome.wustl.edu	37	1	161092920	161092920	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	161092920	161092920	G	T	SNP	DEDD	ENST00000368005	human	ensembl	74_37	-1	known	missense	c.525	p.S175R	0.987	NULL	pfam_DED,superfamily_DEATH-like_dom,smart_DED,pfscan_DED	-	no_errors	DEDD	HGNC	ENSG00000158796	tier1	-	-	52	0	0.00	69	4	5.48
DEDD2	0	genome.wustl.edu	37	19	42713965	42713965	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	42713965	42713965	C	T	SNP	DEDD2	ENST00000595337	human	ensembl	74_37	-1	known	missense	c.476	p.R159Q	1.000	NULL	pfam_DED,superfamily_DEATH-like_dom,smart_DED,pfscan_DED	-	no_errors	DEDD2	HGNC	ENSG00000160570	tier1	-	-	44	0	0.00	27	25	48.08
DEFB124	0	genome.wustl.edu	37	20	30060721	30060722	+	RNA	DEL	CA	CA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	30060721	30060722	CA	-	DEL	DEFB124	ENST00000481595	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.435:0.465	-	-	-	no_errors	DEFB124	HGNC	ENSG00000180383	tier1			15	0	0.00	8	4	33.33
DENND2C	0	genome.wustl.edu	37	1	115127989	115127989	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	115127989	115127989	A	-	DEL	DENND2C	ENST00000495031	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DENND2C	HGNC	ENSG00000175984	tier1			10	0	0.00	9	4	30.77
DENND4A	0	genome.wustl.edu	37	15	66007940	66007940	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	66007940	66007940	C	T	SNP	DENND4A	ENST00000443035	human	ensembl	74_37	-1	known	missense	c.1829	p.R610Q	1.000	pfam_dDENN_dom,smart_dDENN_dom,pfscan_dDENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,tigrfam_Pentatricopeptide_repeat	-	no_errors	DENND4A	HGNC	ENSG00000174485	tier1	-	-	42	0	0.00	27	22	44.90
DENND5B	0	genome.wustl.edu	37	12	31586118	31586118	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	31586118	31586118	G	T	SNP	DENND5B	ENST00000306833	human	ensembl	74_37	-1	known	missense	c.2182	p.H728N	1.000	NULL	pfam_DENN_dom,pfam_Run,pfam_uDENN_dom,pfam_dDENN_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_Run,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_PLAT/LH2_dom,pfscan_Run	-	no_errors	DENND5B	HGNC	ENSG00000170456				40	0	0.00	69	4	5.48
DENND6B	0	genome.wustl.edu	37	22	50751527	50751528	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	50751527	50751528	-	G	INS	DENND6B	ENST00000413817	human	ensembl	74_37	-1	known	frame_shift_ins	c.1358_1357	p.Q453fs	1.000:1.000	pfam_Afi1_N	pfam_Afi1_N,pfam_DENN_dom,pfam_ABL9/DENND6_dom	-	no_errors	DENND6B	HGNC	ENSG00000205593	tier1			54	0	0.00	27	9	25.00
DEPDC5	0	genome.wustl.edu	37	22	32271244	32271244	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	32271244	32271244	C	T	SNP	DEPDC5	ENST00000494060	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DEPDC5	HGNC	ENSG00000100150	tier1	-	-	43	0	0.00	17	11	39.29
DFFB	0	genome.wustl.edu	37	1	3782236	3782236	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	3782236	3782236	C	A	SNP	DFFB	ENST00000339350	human	ensembl	74_37	+1	known	silent	c.271	p.R91	0.000	NULL	pfam_CIDE-N_dom,smart_CIDE-N_dom,pfscan_CIDE-N_dom	-	no_errors	DFFB	HGNC	ENSG00000169598	tier1	-	-	30	0	0.00	21	18	46.15
DGKI	0	genome.wustl.edu	37	7	137257514	137257514	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	137257514	137257514	G	T	SNP	DGKI	ENST00000288490	human	ensembl	74_37	-1	known	missense	c.1832	p.P611H	1.000	pfam_Diacylglycerol_kin_accessory,smart_Diacylglycerol_kin_accessory	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DGKI	HGNC	ENSG00000157680				28	0	0.00	35	3	7.89
DHRS4L1	0	genome.wustl.edu	37	14	24520063	24520063	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	24520063	24520063	G	T	SNP	DHRS4L1	ENST00000558293	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.252	-	-	-	no_errors	RP11-468E2.9	Clone_based_vega_gene	ENSG00000225766	tier1	-	-	88	0	0.00	55	4	6.78
DHX16	0	genome.wustl.edu	37	6	30638221	30638221	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	30638221	30638221	C	T	SNP	DHX16	ENST00000376442	human	ensembl	74_37	-1	known	missense	c.632	p.R211H	1.000	NULL	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX16	HGNC	ENSG00000204560	tier1	rs200028840	-	24	0	0.00	21	16	43.24
DHX34	0	genome.wustl.edu	37	19	47884244	47884244	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	47884244	47884244	C	A	SNP	DHX34	ENST00000328771	human	ensembl	74_37	+1	known	missense	c.3154	p.L1052I	1.000	NULL	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX34	HGNC	ENSG00000134815	tier1	-	-	28	0	0.00	13	12	48.00
DHX37	0	genome.wustl.edu	37	12	125438447	125438447	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	125438447	125438447	G	A	SNP	DHX37	ENST00000308736	human	ensembl	74_37	-1	known	missense	c.2674	p.R892W	0.997	superfamily_P-loop_NTPase	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_T2SS_protein-E,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX37	HGNC	ENSG00000150990	tier1	-	-	36	0	0.00	18	17	48.57
DHX38	0	genome.wustl.edu	37	16	72141562	72141562	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	72141562	72141562	G	A	SNP	DHX38	ENST00000268482	human	ensembl	74_37	+1	known	missense	c.2828	p.G943E	1.000	pfam_Helicase-assoc_dom,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX38	HGNC	ENSG00000140829	tier1	-	-	103	0	0.00	57	37	39.36
DHX57	0	genome.wustl.edu	37	2	39085933	39085933	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	39085933	39085933	G	T	SNP	DHX57	ENST00000295373	human	ensembl	74_37	-1	known	missense	c.1457	p.P486H	0.838	NULL	pfam_RWD-domain,pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Znf_CCCH,superfamily_P-loop_NTPase,superfamily_UBA-like,superfamily_UBQ-conjugating_enzyme/RWD,smart_Znf_CCCH,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX57	HGNC	ENSG00000163214	tier1	-	-	34	0	0.00	27	3	10.00
DIEXF	0	genome.wustl.edu	37	1	210006627	210006627	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	210006627	210006627	C	T	SNP	DIEXF	ENST00000491415	human	ensembl	74_37	+1	known	silent	c.486	p.H162	0.826	NULL	pfam_Digest_organ_expansion_fac-prd,superfamily_P-loop_NTPase	-	no_errors	DIEXF	HGNC	ENSG00000117597	tier1	-	-	78	0	0.00	60	29	32.58
DIO3OS	0	genome.wustl.edu	37	14	102024806	102024806	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	102024806	102024806	G	-	DEL	DIO3OS	ENST00000554735	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DIO3OS	HGNC	ENSG00000258498	tier1			36	0	0.00	24	12	33.33
DISC1	0	genome.wustl.edu	37	1	231858326	231858326	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	231858326	231858326	T	C	SNP	DISC1	ENST00000317586	human	ensembl	74_37	+1	known	silent	c.1089	p.H363	0.045	NULL	NULL	-	no_errors	DISC1	HGNC	ENSG00000162946	tier1	-	-	70	0	0.00	93	29	23.77
DKFZP434H168	0	genome.wustl.edu	37	16	56226638	56226639	+	RNA	INS	-	-	CACA			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	56226638	56226639	-	CACA	INS	DKFZP434H168	ENST00000567381	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.271	-	-	-	no_errors	CTD-2050B12.2	Clone_based_vega_gene	ENSG00000261439	tier1			51	0	0.00	41	9	18.00
DLC1	0	genome.wustl.edu	37	8	12973135	12973135	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	12973135	12973135	T	C	SNP	DLC1	ENST00000276297	human	ensembl	74_37	-1	known	silent	c.1380	p.L460	0.080	pfam_SAM_2	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	DLC1	HGNC	ENSG00000164741	tier1	-	-	36	0	0.00	29	10	25.64
DLG2	0	genome.wustl.edu	37	11	83182726	83182726	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	83182726	83182726	G	A	SNP	DLG2	ENST00000376104	human	ensembl	74_37	-1	known	missense	c.2389	p.R797W	1.000	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_Guanylate_kin-like	pfam_PDZ,pfam_GK/Ca_channel_bsu,pfam_MAGUK_PEST_N,pfam_PDZ_assoc,pfam_L27_1,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG2	HGNC	ENSG00000150672	tier1	-	-	34	0	0.00	17	12	41.38
DLG2	0	genome.wustl.edu	37	11	83770365	83770365	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	83770365	83770365	G	T	SNP	DLG2	ENST00000376104	human	ensembl	74_37	-1	known	silent	c.912	p.G304	0.696	pfam_PDZ,superfamily_PDZ,pirsf_M-assoc_guanylate_kinase,pfscan_PDZ	pfam_PDZ,pfam_GK/Ca_channel_bsu,pfam_MAGUK_PEST_N,pfam_PDZ_assoc,pfam_L27_1,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG2	HGNC	ENSG00000150672	tier1	-	-	35	0	0.00	24	4	14.29
DLG4	0	genome.wustl.edu	37	17	7095249	7095249	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	7095249	7095249	C	T	SNP	DLG4	ENST00000399510	human	ensembl	74_37	-1	known	missense	c.2068	p.A690T	1.000	pirsf_M-assoc_guanylate_kinase,pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pirsf_M-assoc_guanylate_kinase,pfam_GK/Ca_channel_bsu,pfam_PDZ,pfam_PDZ_assoc,pfam_MAGUK_PEST_N,pfam_SH3_domain,pfam_SH3_2,pfam_L27_1,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG4	HGNC	ENSG00000132535	tier1	-	-	39	0	0.00	16	10	38.46
DLGAP4	0	genome.wustl.edu	37	20	35155512	35155512	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	35155512	35155512	A	G	SNP	DLGAP4	ENST00000475894	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.995	-	-	-	no_errors	DLGAP4	HGNC	ENSG00000080845	tier1	-	-	26	0	0.00	27	12	30.77
DLGAP4	0	genome.wustl.edu	37	20	35156540	35156543	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	35156540	35156543	TTTT	-	DEL	DLGAP4	ENST00000475894	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010:0.004:0.002:0.003	-	-	-	no_errors	DLGAP4	HGNC	ENSG00000080845	tier1			47	0	0.00	33	15	31.25
DLGAP5	0	genome.wustl.edu	37	14	55625371	55625371	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	55625371	55625371	T	-	DEL	DLGAP5	ENST00000247191	human	ensembl	74_37	-1	known	frame_shift_del	c.1742	p.N581fs	0.680	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP5	HGNC	ENSG00000126787	tier1			67	0	0.00	50	26	34.21
DLL1	0	genome.wustl.edu	37	6	170592659	170592659	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	170592659	170592659	G	A	SNP	DLL1	ENST00000366756	human	ensembl	74_37	-1	known	missense	c.1708	p.R570W	0.993	NULL	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_DSL,pfscan_EG-like_dom	-	no_errors	DLL1	HGNC	ENSG00000198719	tier1	-	-	64	0	0.00	26	14	35.00
DLX6	0	genome.wustl.edu	37	7	96635421	96635423	+	In_Frame_Del	DEL	GCC	GCC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GCC	GCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	96635421	96635423	GCC	-	DEL	DLX6	ENST00000518156	human	ensembl	74_37	+1	known	in_frame_del	c.132_134	p.P48in_frame_del	1.000:1.000:0.992	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DLX6	HGNC	ENSG00000006377	tier1			49	0	0.00	49	7	12.50
DLX6	0	genome.wustl.edu	37	7	96635545	96635547	+	In_Frame_Del	DEL	CAC	CAC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CAC	CAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	96635545	96635547	CAC	-	DEL	DLX6	ENST00000518156	human	ensembl	74_37	+1	known	in_frame_del	c.256_258	p.H89in_frame_del	0.872:0.883:0.914	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DLX6	HGNC	ENSG00000006377	tier1			8	0	0.00	4	3	42.86
DMC1	0	genome.wustl.edu	37	22	38962674	38962674	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	38962674	38962674	G	A	SNP	DMC1	ENST00000216024	human	ensembl	74_37	-1	known	missense	c.164	p.T55I	1.000	superfamily_DNA_repair_Rad51/TF_NusA_a-hlx,pirsf_DNA_recomb/repair_RecA-like,tigrfam_DMC1_rcmbase	pfam_DNA_recomb/repair_Rad51_C,pfam_DNA_recomb/repair_RecA,pfam_Circ_KaiC/RadA,superfamily_P-loop_NTPase,superfamily_DNA_repair_Rad51/TF_NusA_a-hlx,smart_AAA+_ATPase,pirsf_DNA_recomb/repair_RecA-like,pfscan_DNA_recomb_RecA/RadB_ATP-bd,pfscan_RecA_monomer-monomer_interface,tigrfam_DMC1_rcmbase	-	no_errors	DMC1	HGNC	ENSG00000100206	tier1	-	-	87	0	0.00	46	25	35.21
DMXL2	0	genome.wustl.edu	37	15	51787281	51787281	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	51787281	51787281	G	T	SNP	DMXL2	ENST00000543779	human	ensembl	74_37	-1	known	missense	c.4723	p.L1575I	0.939	pfam_Rav1p_C	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL2	HGNC	ENSG00000104093	tier1	-	-	26	0	0.00	15	10	40.00
DMXL2	0	genome.wustl.edu	37	15	51860757	51860758	+	Splice_Site	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	51860757	51860758	-	A	INS	DMXL2	ENST00000543779	human	ensembl	74_37	-1	known	splice_site_ins	c.214-3_214-2	e3-2	1.000:0.998	-	-	-	no_errors	DMXL2	HGNC	ENSG00000104093	tier1			29	0	0.00	22	15	40.54
DNAH1	0	genome.wustl.edu	37	3	52431015	52431015	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	52431015	52431015	C	T	SNP	DNAH1	ENST00000420323	human	ensembl	74_37	+1	known	silent	c.11742	p.S3914	0.002	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	-	no_errors	DNAH1	HGNC	ENSG00000114841	tier1	-	-	44	0	0.00	11	14	56.00
DNAH10	0	genome.wustl.edu	37	12	124298415	124298415	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	124298415	124298415	G	T	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	missense	c.3382	p.D1128Y	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	tier1	-	-	61	0	0.00	61	12	16.44
DNAH10	0	genome.wustl.edu	37	12	124335572	124335572	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	124335572	124335572	G	A	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	silent	c.5886	p.L1962	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	tier1	-	-	40	0	0.00	24	15	38.46
DNAH11	0	genome.wustl.edu	37	7	21857862	21857862	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	21857862	21857862	G	T	SNP	DNAH11	ENST00000328843	human	ensembl	74_37	+1	known	missense	c.10617	p.L3539F	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH11	HGNC	ENSG00000105877	tier1	-	-	41	0	0.00	46	6	11.54
DNAH14	0	genome.wustl.edu	37	1	225230734	225230735	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	225230734	225230735	-	A	INS	DNAH14	ENST00000430092	human	ensembl	74_37	+1	known	frame_shift_ins	c.1686_1687	p.H564fs	0.000:0.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Tautomerase/MIF_sf,smart_AAA+_ATPase	-	no_errors	DNAH14	HGNC	ENSG00000185842	tier1			38	0	0.00	41	22	34.92
DNAH17	0	genome.wustl.edu	37	17	76491157	76491157	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	76491157	76491157	C	T	SNP	DNAH17	ENST00000389840	human	ensembl	74_37	-1	known	missense	c.5884	p.D1962N	1.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_HR1_rho-bd	-	no_errors	DNAH17	HGNC	ENSG00000187775	tier1	-	-	37	0	0.00	14	15	51.72
DNAH3	0	genome.wustl.edu	37	16	20952745	20952745	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	20952745	20952745	G	T	SNP	DNAH3	ENST00000261383	human	ensembl	74_37	-1	known	missense	c.11632	p.Q3878K	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486	tier1	-	-	72	0	0.00	43	5	10.42
DNAH5	0	genome.wustl.edu	37	5	13751302	13751302	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	13751302	13751302	G	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.11096	p.P3699H	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	121	0	0.00	166	44	20.95
DNAH7	0	genome.wustl.edu	37	2	196602560	196602560	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	196602560	196602560	A	-	DEL	DNAH7	ENST00000484183	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	DNAH7	HGNC	ENSG00000118997	tier1			14	0	0.00	13	6	31.58
DNAH9	0	genome.wustl.edu	37	17	11738145	11738145	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	11738145	11738145	G	T	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.9437	p.C3146F	1.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174				26	0	0.00	37	3	7.50
DNAJA1	0	genome.wustl.edu	37	9	33030485	33030485	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	33030485	33030485	G	T	SNP	DNAJA1	ENST00000330899	human	ensembl	74_37	+1	known	missense	c.463	p.G155C	1.000	pfam_HSP_DnaJ_Cys-rich_dom,superfamily_HSP40/DnaJ_pept-bd,superfamily_HSP_DnaJ_Cys-rich_dom,pfscan_HSP_DnaJ_Cys-rich_dom	pfam_DnaJ_C,pfam_DnaJ_domain,pfam_HSP_DnaJ_Cys-rich_dom,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,superfamily_HSP_DnaJ_Cys-rich_dom,smart_DnaJ_domain,pfscan_DnaJ_domain,pfscan_HSP_DnaJ_Cys-rich_dom,prints_DnaJ_domain	-	no_errors	DNAJA1	HGNC	ENSG00000086061	tier1	-	-	25	0	0.00	28	15	34.88
DNAJA1	0	genome.wustl.edu	37	9	33037063	33037063	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	33037063	33037063	C	T	SNP	DNAJA1	ENST00000330899	human	ensembl	74_37	+1	known	missense	c.925	p.P309S	1.000	pfam_DnaJ_C,superfamily_HSP40/DnaJ_pept-bd	pfam_DnaJ_C,pfam_DnaJ_domain,pfam_HSP_DnaJ_Cys-rich_dom,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,superfamily_HSP_DnaJ_Cys-rich_dom,smart_DnaJ_domain,pfscan_DnaJ_domain,pfscan_HSP_DnaJ_Cys-rich_dom,prints_DnaJ_domain	-	no_errors	DNAJA1	HGNC	ENSG00000086061	tier1	-	-	76	0	0.00	61	7	10.29
DNAJB2	0	genome.wustl.edu	37	2	220149370	220149370	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	220149370	220149370	G	T	SNP	DNAJB2	ENST00000336576	human	ensembl	74_37	+1	known	silent	c.636	p.L212	1.000	smart_Ubiquitin-int_motif	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB2	HGNC	ENSG00000135924	tier1	-	-	80	0	0.00	58	4	6.45
DNAJC11	0	genome.wustl.edu	37	1	6696231	6696231	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	6696231	6696231	C	T	SNP	DNAJC11	ENST00000377577	human	ensembl	74_37	-1	known	missense	c.1600	p.V534I	0.999	pfam_DnaJ-like_C11_C	pfam_DnaJ-like_C11_C,pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC11	HGNC	ENSG00000007923	tier1	-	-	42	0	0.00	41	4	8.89
DNAJC16	0	genome.wustl.edu	37	1	15895341	15895341	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	15895341	15895341	A	G	SNP	DNAJC16	ENST00000483270	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	DNAJC16	HGNC	ENSG00000116138	tier1	-	-	37	0	0.00	13	11	45.83
DNAJC21	0	genome.wustl.edu	37	5	34949704	34949704	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	34949704	34949704	A	-	DEL	DNAJC21	ENST00000382021	human	ensembl	74_37	+1	known	frame_shift_del	c.1242	p.K416fs	0.000	NULL	pfam_DnaJ_domain,pfam_Znf_C2H2_jaz,superfamily_DnaJ_domain,smart_DnaJ_domain,smart_Znf_U1,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC21	HGNC	ENSG00000168724	tier1			109	0	0.00	170	47	21.66
DNAJC27	0	genome.wustl.edu	37	2	25180754	25180754	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	25180754	25180754	C	T	SNP	DNAJC27	ENST00000264711	human	ensembl	74_37	-1	known	nonsense	c.330	p.W110*	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_DnaJ_domain,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,superfamily_DnaJ_domain,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_Small_GTPase,prints_DnaJ_domain,tigrfam_Small_GTP-bd_dom	-	no_errors	DNAJC27	HGNC	ENSG00000115137	tier1	-	-	34	0	0.00	19	13	40.62
DNLZ	0	genome.wustl.edu	37	9	139257455	139257455	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	139257455	139257455	G	T	SNP	DNLZ	ENST00000371738	human	ensembl	74_37	-1	known	missense	c.354	p.D118E	1.000	pfam_Znf_DNL-typ	pfam_Znf_DNL-typ	-	no_errors	DNLZ	HGNC	ENSG00000213221	tier1	-	-	74	0	0.00	68	4	5.56
DNM1	0	genome.wustl.edu	37	9	131016963	131016963	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	131016963	131016963	T	C	SNP	DNM1	ENST00000372923	human	ensembl	74_37	+1	known	silent	c.2565	p.P855	1.000	NULL	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin_SF	-	no_errors	DNM1	HGNC	ENSG00000106976	tier1	-	-	58	0	0.00	44	24	35.29
DNM1	0	genome.wustl.edu	37	9	131013112	131013112	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	131013112	131013112	G	0	DEL	DNM1	ENST00000372923	human	ensembl	74_37	+1	known	frame_shift_del	c.2427	p.A812fs	1.000	NULL	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin_SF	-	no_errors	DNM1	HGNC	ENSG00000106976				10	0	0.00	7	3	30.00
DNM1P46	0	genome.wustl.edu	37	15	100330968	100330969	+	RNA	DEL	AC	AC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	100330968	100330969	AC	-	DEL	DNM1P46	ENST00000341853	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008:0.009	-	-	-	no_errors	DNM1P46	HGNC	ENSG00000182397	tier1			16	0	0.00	11	6	35.29
DNM1P51	0	genome.wustl.edu	37	15	84953251	84953251	+	RNA	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	84953251	84953251	T	A	SNP	DNM1P51	ENST00000558801	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.055	-	-	-	no_errors	DNM1P51	HGNC	ENSG00000235370	tier1	-	-	50	0	0.00	34	16	32.00
DNM1P51	0	genome.wustl.edu	37	15	84957359	84957359	+	RNA	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	84957359	84957359	T	C	SNP	DNM1P51	ENST00000558801	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.953	-	-	-	no_errors	DNM1P51	HGNC	ENSG00000235370	tier1	-	-	205	0	0.00	108	27	20.00
DNM1P51	0	genome.wustl.edu	37	15	84957408	84957408	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	84957408	84957408	C	T	SNP	DNM1P51	ENST00000558801	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.868	-	-	-	no_errors	DNM1P51	HGNC	ENSG00000235370	tier1	-	-	251	0	0.00	129	27	17.31
DNM1P51	0	genome.wustl.edu	37	15	84957409	84957409	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	84957409	84957409	A	G	SNP	DNM1P51	ENST00000558801	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.867	-	-	-	no_errors	DNM1P51	HGNC	ENSG00000235370	tier1	-	-	251	0	0.00	130	29	18.24
DNM1P51	0	genome.wustl.edu	37	15	84957430	84957430	+	RNA	SNP	G	G	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	84957430	84957430	G	C	SNP	DNM1P51	ENST00000558801	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.977	-	-	-	no_errors	DNM1P51	HGNC	ENSG00000235370	tier1	-	-	270	0	0.00	136	62	31.31
DNMT3A	0	genome.wustl.edu	37	2	25505431	25505431	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	25505431	25505431	C	-	DEL	DNMT3A	ENST00000264709	human	ensembl	74_37	-1	known	frame_shift_del	c.327	p.Q110fs	0.978	NULL	pfam_PWWP_dom,pfam_C5_MeTfrase,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	DNMT3A	HGNC	ENSG00000119772	tier1			49	0	0.00	27	11	28.95
DNMT3B	0	genome.wustl.edu	37	20	31384650	31384651	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	31384650	31384651	-	G	INS	DNMT3B	ENST00000328111	human	ensembl	74_37	+1	known	frame_shift_ins	c.1352_1353	p.L454fs	1.000:1.000	NULL	pfam_PWWP_dom,pfam_C5_MeTfrase,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	DNMT3B	HGNC	ENSG00000088305	tier1			52	0	0.00	33	21	38.89
DNMT3L	0	genome.wustl.edu	37	21	45666415	45666417	+	In_Frame_Del	DEL	TTC	TTC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTC	TTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	45666415	45666417	TTC	-	DEL	DNMT3L	ENST00000270172	human	ensembl	74_37	-1	known	in_frame_del	c.1029_1027	p.E343in_frame_del	0.000:0.000:0.001	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	DNMT3L	HGNC	ENSG00000142182	tier1			57	0	0.00	47	20	29.85
DOC2A	0	genome.wustl.edu	37	16	30021446	30021446	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	30021446	30021446	G	T	SNP	DOC2A	ENST00000350119	human	ensembl	74_37	-1	known	missense	c.98	p.S33Y	1.000	pirsf_Doc2	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pirsf_Doc2,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_dom	-	no_errors	DOC2A	HGNC	ENSG00000149927	tier1	-	-	48	0	0.00	35	5	12.50
DOCK10	0	genome.wustl.edu	37	2	225781494	225781494	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	225781494	225781494	G	T	SNP	DOCK10	ENST00000258390	human	ensembl	74_37	-1	known	missense	c.251	p.T84K	0.994	pfam_DOCK_C/D_N	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK10	HGNC	ENSG00000135905	tier1	-	-	60	0	0.00	64	4	5.88
DOCK3	0	genome.wustl.edu	37	3	51352461	51352461	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	51352461	51352461	G	T	SNP	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	missense	c.3304	p.V1102L	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538	tier1	-	-	44	0	0.00	38	4	9.52
DOCK3	0	genome.wustl.edu	37	3	51417604	51417604	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	51417604	51417604	C	-	DEL	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	frame_shift_del	c.5549	p.P1852fs	0.115	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538	tier1			63	0	0.00	31	28	47.46
DOCK5	0	genome.wustl.edu	37	8	25230154	25230154	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	25230154	25230154	G	T	SNP	DOCK5	ENST00000276440	human	ensembl	74_37	+1	known	nonsense	c.3604	p.E1202*	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK5	HGNC	ENSG00000147459	tier1	-	-	68	0	0.00	73	4	5.19
DOCK5	0	genome.wustl.edu	37	8	25240190	25240190	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	25240190	25240190	A	-	DEL	DOCK5	ENST00000276440	human	ensembl	74_37	+1	known	frame_shift_del	c.4027	p.R1345fs	1.000	NULL	pfam_DOCK_C,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK5	HGNC	ENSG00000147459	tier1			47	0	0.00	43	22	33.85
DOCK7	0	genome.wustl.edu	37	1	62941104	62941104	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	62941104	62941104	A	-	DEL	DOCK7	ENST00000467758	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.057	-	-	-	no_errors	DOCK7	HGNC	ENSG00000116641	tier1			13	0	0.00	5	13	72.22
DOCK9	0	genome.wustl.edu	37	13	99502312	99502312	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	99502312	99502312	A	-	DEL	DOCK9	ENST00000339416	human	ensembl	74_37	-1	known	frame_shift_del	c.4005	p.F1335fs	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK9	HGNC	ENSG00000088387	tier1			27	0	0.00	46	12	20.69
DOK6	0	genome.wustl.edu	37	18	67345063	67345063	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	67345063	67345063	C	T	SNP	DOK6	ENST00000382713	human	ensembl	74_37	+1	known	missense	c.383	p.A128V	1.000	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	-	no_errors	DOK6	HGNC	ENSG00000206052	tier1	-	-	80	0	0.00	54	38	40.86
DOT1L	0	genome.wustl.edu	37	19	2226760	2226760	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	2226760	2226760	C	T	SNP	DOT1L	ENST00000398665	human	ensembl	74_37	+1	known	missense	c.4240	p.R1414W	0.989	pirsf_Histone_H3-K79_MeTrfase_met	pfam_DOT1,pirsf_Histone_H3-K79_MeTrfase_met	-	no_errors	DOT1L	HGNC	ENSG00000104885				18	0	0.00	8	5	38.46
DPAGT1	0	genome.wustl.edu	37	11	118969143	118969143	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	118969143	118969143	A	-	DEL	DPAGT1	ENST00000354202	human	ensembl	74_37	-1	known	frame_shift_del	c.698	p.F233fs	1.000	pfam_Glycosyl_transferase_4	pfam_Glycosyl_transferase_4	-	no_errors	DPAGT1	HGNC	ENSG00000172269	tier1			47	0	0.00	38	18	32.14
DPH2	0	genome.wustl.edu	37	1	44435689	44435689	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	44435689	44435689	A	G	SNP	DPH2	ENST00000471934	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DPH2	HGNC	ENSG00000132768	tier1	-	-	30	0	0.00	15	12	44.44
DPP7	0	genome.wustl.edu	37	9	140006327	140006327	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	140006327	140006327	C	-	DEL	DPP7	ENST00000371579	human	ensembl	74_37	-1	known	frame_shift_del	c.1205	p.G402fs	0.000	pfam_Peptidase_S28	pfam_Peptidase_S28,pfam_AB_hydrolase_1	-	no_errors	DPP7	HGNC	ENSG00000176978	tier1			43	0	0.00	11	10	47.62
DPY19L2	0	genome.wustl.edu	37	12	64062105	64062105	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	64062105	64062105	G	A	SNP	DPY19L2	ENST00000324472	human	ensembl	74_37	-1	known	silent	c.69	p.R23	0.839	NULL	pfam_Dpy-19	-	no_errors	DPY19L2	HGNC	ENSG00000177990	tier1	-	-	53	0	0.00	16	20	55.56
DPY19L2P1	0	genome.wustl.edu	37	7	35131548	35131548	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	35131548	35131548	G	A	SNP	DPY19L2P1	ENST00000436258	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.985	-	-	-	no_errors	DPY19L2P1	HGNC	ENSG00000189212	tier1	-	-	87	0	0.00	53	16	23.19
DSC1	0	genome.wustl.edu	37	18	28711575	28711575	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	28711575	28711575	G	T	SNP	DSC1	ENST00000257198	human	ensembl	74_37	-1	known	silent	c.2469	p.T823	0.970	pfam_Cadherin_cytoplasmic-dom,prints_Cadherin/Desmocollin	pfam_Cadherin,pfam_Cadherin_pro_dom,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin/Desmocollin,prints_Cadherin,prints_Desmosomal_cadherin	-	no_errors	DSC1	HGNC	ENSG00000134765	tier1	-	-	94	0	0.00	61	43	41.35
DSG4	0	genome.wustl.edu	37	18	28993367	28993367	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	28993367	28993367	A	C	SNP	DSG4	ENST00000359747	human	ensembl	74_37	+1	known	missense	c.2989	p.S997R	0.004	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Desmoglein,prints_Desmosomal_cadherin	-	no_errors	DSG4	HGNC	ENSG00000175065	tier1	-	-	71	0	0.00	51	33	39.29
DST	0	genome.wustl.edu	37	6	56473882	56473882	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	56473882	56473882	C	T	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	silent	c.5445	p.A1815	0.000	superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	44	0	0.00	29	26	47.27
DST	0	genome.wustl.edu	37	6	56819248	56819248	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	56819248	56819248	C	-	DEL	DST	ENST00000370754	human	ensembl	74_37	-1	known	frame_shift_del	c.138	p.R46fs	1.000	superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1			82	0	0.00	46	15	24.59
DSTYK	0	genome.wustl.edu	37	1	205117339	205117339	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	205117339	205117339	G	A	SNP	DSTYK	ENST00000367162	human	ensembl	74_37	-1	known	missense	c.2596	p.R866W	0.999	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DSTYK	HGNC	ENSG00000133059	tier1	-	-	29	0	0.00	42	11	20.75
DTL	0	genome.wustl.edu	37	1	212254045	212254045	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	212254045	212254045	C	T	SNP	DTL	ENST00000366991	human	ensembl	74_37	+1	known	missense	c.1214	p.T405M	0.353	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DTL	HGNC	ENSG00000143476	tier1	-	-	79	0	0.00	81	20	19.80
DTNBP1	0	genome.wustl.edu	37	6	15523213	15523213	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	15523213	15523213	T	C	SNP	DTNBP1	ENST00000355917	human	ensembl	74_37	-1	known	missense	c.1052	p.D351G	1.000	NULL	pfam_Dysbindin,superfamily_Trp_syn_b_sub_like_PLP_eny_SF	-	no_errors	DTNBP1	HGNC	ENSG00000047579	tier1	-	-	42	0	0.00	24	10	29.41
DUOX2	0	genome.wustl.edu	37	15	45405204	45405204	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	45405204	45405204	G	A	SNP	DUOX2	ENST00000389039	human	ensembl	74_37	-1	known	silent	c.141	p.H47	0.950	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr,prints_Recoverin	-	no_errors	DUOX2	HGNC	ENSG00000140279	tier1	-	-	42	0	0.00	15	20	57.14
DUSP10	0	genome.wustl.edu	37	1	221874930	221874931	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	221874930	221874931	AA	-	DEL	DUSP10	ENST00000468085	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.966:0.957	-	-	-	no_errors	DUSP10	HGNC	ENSG00000143507	tier1			11	0	0.00	24	8	25.00
DUSP10	0	genome.wustl.edu	37	1	221875662	221875663	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	221875662	221875663	AA	-	DEL	DUSP10	ENST00000468085	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.040:0.067	-	-	-	no_errors	DUSP10	HGNC	ENSG00000143507	tier1			23	0	0.00	18	6	25.00
DUSP5	0	genome.wustl.edu	37	10	112266859	112266859	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	112266859	112266859	A	G	SNP	DUSP5	ENST00000369583	human	ensembl	74_37	+1	known	missense	c.695	p.D232G	1.000	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pirsf_MKP,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP5	HGNC	ENSG00000138166	tier1	-	-	51	0	0.00	24	13	35.14
DVL2	0	genome.wustl.edu	37	17	7129207	7129207	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	7129207	7129207	C	T	SNP	DVL2	ENST00000005340	human	ensembl	74_37	-1	known	missense	c.2188	p.E730K	1.000	NULL	pfam_Dishevelled_C-dom,pfam_DIX,pfam_Dishevelled_protein_dom,pfam_PDZ,pfam_DEP_dom,superfamily_PDZ,smart_DIX,smart_PDZ,smart_DEP_dom,pfscan_DEP_dom,pfscan_DIX,pfscan_PDZ,prints_Dishevelled_2,prints_Dishevelled_fam	-	no_errors	DVL2	HGNC	ENSG00000004975	tier1	-	-	73	0	0.00	34	21	38.18
DYNC1H1	0	genome.wustl.edu	37	14	102494139	102494139	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	102494139	102494139	C	T	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	missense	c.9232	p.R3078W	1.000	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102	tier1	-	-	67	0	0.00	28	27	49.09
DYNC2H1	0	genome.wustl.edu	37	11	103006263	103006263	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	103006263	103006263	T	C	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.2245	p.W749R	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	47	0	0.00	33	19	36.54
DYNLT1	0	genome.wustl.edu	37	6	159058760	159058760	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	159058760	159058760	A	-	DEL	DYNLT1	ENST00000367085	human	ensembl	74_37	-1	known	frame_shift_del	c.236	p.L79fs	0.000	NULL	pfam_Tctex	-	no_errors	DYNLT1	HGNC	ENSG00000146425	tier1			25	0	0.00	7	10	58.82
DYRK1A	0	genome.wustl.edu	37	21	38877824	38877824	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	38877824	38877824	T	C	SNP	DYRK1A	ENST00000398960	human	ensembl	74_37	+1	known	missense	c.1478	p.V493A	0.996	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK1A	HGNC	ENSG00000157540				37	0	0.00	23	2	8.00
DZIP1L	0	genome.wustl.edu	37	3	137822704	137822704	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	137822704	137822704	C	T	SNP	DZIP1L	ENST00000327532	human	ensembl	74_37	-1	known	missense	c.110	p.R37H	1.000	NULL	pfscan_Znf_C2H2	-	no_errors	DZIP1L	HGNC	ENSG00000158163	tier1	-	-	60	0	0.00	50	4	7.41
EAF1-AS1	0	genome.wustl.edu	37	3	15480599	15480599	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	15480599	15480599	T	-	DEL	EAF1-AS1	ENST00000494875	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.925	-	-	-	no_errors	EAF1-AS1	HGNC	ENSG00000249786	tier1			28	0	0.00	34	7	17.07
EAPP	0	genome.wustl.edu	37	14	34998660	34998660	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	34998660	34998660	T	-	DEL	EAPP	ENST00000250454	human	ensembl	74_37	-1	known	frame_shift_del	c.374	p.K125fs	1.000	NULL	pfam_E2F-assoc_phosphoprotein	-	no_errors	EAPP	HGNC	ENSG00000129518	tier1			63	0	0.00	46	15	24.59
EBF3	0	genome.wustl.edu	37	10	131761680	131761680	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	131761680	131761680	G	A	SNP	EBF3	ENST00000355311	human	ensembl	74_37	-1	known	missense	c.242	p.P81L	1.000	NULL	pfam_IPT,superfamily_Ig_E-set,smart_IPT	-	no_errors	EBF3	HGNC	ENSG00000108001	tier1	-	-	103	0	0.00	58	25	30.12
EBF3	0	genome.wustl.edu	37	10	131761704	131761704	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	131761704	131761704	G	A	SNP	EBF3	ENST00000355311	human	ensembl	74_37	-1	known	missense	c.218	p.A73V	1.000	NULL	pfam_IPT,superfamily_Ig_E-set,smart_IPT	-	no_errors	EBF3	HGNC	ENSG00000108001				99	0	0.00	75	4	5.06
EBI3	0	genome.wustl.edu	37	19	4233255	4233255	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	4233255	4233255	C	-	DEL	EBI3	ENST00000221847	human	ensembl	74_37	+1	known	frame_shift_del	c.330	p.W112fs	0.004	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	EBI3	HGNC	ENSG00000105246	tier1			104	0	0.00	66	7	9.59
ECE1	0	genome.wustl.edu	37	1	21554464	21554464	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	21554464	21554464	C	T	SNP	ECE1	ENST00000374893	human	ensembl	74_37	-1	known	missense	c.1741	p.G581R	1.000	pfam_Peptidase_M13_C,prints_Peptidase_M13_C	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	ECE1	HGNC	ENSG00000117298	tier1	-	-	37	0	0.00	28	14	33.33
ECE1	0	genome.wustl.edu	37	1	21586835	21586835	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	21586835	21586835	A	G	SNP	ECE1	ENST00000374893	human	ensembl	74_37	-1	known	missense	c.544	p.Y182H	1.000	pfam_Peptidase_M13_N	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	ECE1	HGNC	ENSG00000117298	tier1	-	-	49	0	0.00	39	6	13.33
ECE2	0	genome.wustl.edu	37	3	184001715	184001715	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	184001715	184001715	G	A	SNP	ECE2	ENST00000402825	human	ensembl	74_37	+1	known	missense	c.1313	p.R438H	0.999	pfam_Peptidase_M13_N	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,pfam_Methyltransf_11,prints_Peptidase_M13_C	-	no_errors	ECE2	HGNC	ENSG00000145194	tier1	-	-	40	0	0.00	50	10	16.67
ECEL1	0	genome.wustl.edu	37	2	233350693	233350693	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	233350693	233350693	G	A	SNP	ECEL1	ENST00000304546	human	ensembl	74_37	-1	known	missense	c.671	p.A224V	0.003	pfam_Peptidase_M13_N	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	ECEL1	HGNC	ENSG00000171551	tier1	-	-	30	0	0.00	16	6	27.27
ECM1	0	genome.wustl.edu	37	1	150483621	150483621	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	150483621	150483621	C	T	SNP	ECM1	ENST00000369049	human	ensembl	74_37	+1	known	missense	c.736	p.R246C	1.000	pfam_ECM1,superfamily_Serum_albumin-like	pfam_ECM1,superfamily_Serum_albumin-like	-	no_errors	ECM1	HGNC	ENSG00000143369	tier1	-	-	72	0	0.00	56	22	28.21
ECSIT	0	genome.wustl.edu	37	19	11624897	11624897	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	11624897	11624897	G	A	SNP	ECSIT	ENST00000270517	human	ensembl	74_37	-1	known	missense	c.236	p.A79V	0.010	pfam_ECSIT	pfam_ECSIT	-	no_errors	ECSIT	HGNC	ENSG00000130159	tier1	-	-	49	0	0.00	21	17	44.74
ECT2L	0	genome.wustl.edu	37	6	139165650	139165650	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	139165650	139165650	C	T	SNP	ECT2L	ENST00000367682	human	ensembl	74_37	+1	known	nonsense	c.697	p.R233*	0.000	NULL	pfam_DH-domain,pfam_F-box_dom,superfamily_DH-domain,superfamily_F-box_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ECT2L	HGNC	ENSG00000203734	tier1	-	-	46	0	0.00	45	5	10.00
EDEM2	0	genome.wustl.edu	37	20	33730239	33730239	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	33730239	33730239	G	T	SNP	EDEM2	ENST00000374492	human	ensembl	74_37	-1	known	missense	c.301	p.L101I	1.000	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	EDEM2	HGNC	ENSG00000088298	tier1	-	-	50	0	0.00	70	4	5.41
EDIL3	0	genome.wustl.edu	37	5	83362376	83362376	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	83362376	83362376	G	A	SNP	EDIL3	ENST00000296591	human	ensembl	74_37	-1	known	missense	c.701	p.A234V	1.000	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,pfam_EGF_extracell,superfamily_Galactose-bd-like,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Coagulation_fac_5/8-C_type_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	EDIL3	HGNC	ENSG00000164176	tier1	-	-	50	0	0.00	35	28	44.44
EEF2	0	genome.wustl.edu	37	19	3980633	3980633	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	3980633	3980633	G	A	SNP	EEF2	ENST00000309311	human	ensembl	74_37	-1	known	missense	c.1225	p.R409W	0.987	superfamily_Transl_B-barrel	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFG/EF2_IV,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Transl_B-barrel,superfamily_EFG_III-V,smart_Transl_elong_EFG/EF2_IV,smart_EFG_V,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EEF2	HGNC	ENSG00000167658	tier1	-	-	57	0	0.00	25	19	43.18
EFEMP2	0	genome.wustl.edu	37	11	65634513	65634513	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	65634513	65634513	C	T	SNP	EFEMP2	ENST00000307998	human	ensembl	74_37	-1	known	missense	c.1208	p.R403Q	1.000	NULL	pfam_EGF-like_Ca-bd_dom,superfamily_TIL_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,prints_Thrombomodulin	-	no_errors	EFEMP2	HGNC	ENSG00000172638				46	0	0.00	49	3	5.77
EFHC2	0	genome.wustl.edu	37	X	44094659	44094660	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	44094659	44094660	-	A	INS	EFHC2	ENST00000420999	human	ensembl	74_37	-1	known	frame_shift_ins	c.1315_1314	p.A438fs	1.000:0.996	smart_Uncharacterised_DM10	pfam_DUF1126,smart_Uncharacterised_DM10,pfscan_EF_hand_dom	-	no_errors	EFHC2	HGNC	ENSG00000183690	tier1			23	0	0.00	10	13	56.52
EFTUD1P1	0	genome.wustl.edu	37	15	84770803	84770803	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	84770803	84770803	A	G	SNP	EFTUD1P1	ENST00000558187	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	EFTUD1P1	HGNC	ENSG00000259404	tier1	-	-	134	0	0.00	71	53	42.74
EGFLAM	0	genome.wustl.edu	37	5	38370435	38370435	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	38370435	38370435	C	T	SNP	EGFLAM	ENST00000354891	human	ensembl	74_37	+1	known	missense	c.583	p.R195W	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Laminin_G,pfam_Fibronectin_type3,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Laminin_G	-	no_errors	EGFLAM	HGNC	ENSG00000164318	tier1	-	-	41	0	0.00	79	17	17.71
EGLN2	0	genome.wustl.edu	37	19	41313052	41313052	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	41313052	41313052	G	A	SNP	EGLN2	ENST00000303961	human	ensembl	74_37	+1	known	missense	c.973	p.G325S	1.000	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	EGLN2	HGNC	ENSG00000269858	tier1	-	-	70	0	0.00	20	22	52.38
EGR2	0	genome.wustl.edu	37	10	64573471	64573473	+	In_Frame_Del	DEL	GGC	GGC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GGC	GGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	64573471	64573473	GGC	-	DEL	EGR2	ENST00000242480	human	ensembl	74_37	-1	known	in_frame_del	c.927_925	p.A309in_frame_del	1.000:1.000:0.861	NULL	pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR2	HGNC	ENSG00000122877	tier1			52	0	0.00	41	13	24.07
EID1	0	genome.wustl.edu	37	15	49170653	49170653	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	49170653	49170653	G	A	SNP	EID1	ENST00000530028	human	ensembl	74_37	+1	known	missense	c.280	p.E94K	0.846	NULL	NULL	-	no_errors	EID1	HGNC	ENSG00000255302	tier1	-	-	90	0	0.00	38	33	46.48
EIF2A	0	genome.wustl.edu	37	3	150293481	150293481	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	150293481	150293481	G	A	SNP	EIF2A	ENST00000460851	human	ensembl	74_37	+1	known	missense	c.1429	p.D477N	1.000	pirsf_TIF2A	pfam_TIF_beta_prop-like,pirsf_TIF2A	-	no_errors	EIF2A	HGNC	ENSG00000144895	tier1	-	-	20	0	0.00	17	18	51.43
EIF2AK4	0	genome.wustl.edu	37	15	40280227	40280227	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	40280227	40280227	A	G	SNP	EIF2AK4	ENST00000263791	human	ensembl	74_37	+1	known	missense	c.2447	p.Q816R	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_GCN2,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RWD-domain,superfamily_Kinase-like_dom,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Anticodon-bd,smart_RWD-domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_GCN2,pfscan_RWD-domain,pfscan_Prot_kinase_dom	-	no_errors	EIF2AK4	HGNC	ENSG00000128829	tier1	-	-	83	0	0.00	33	32	49.23
EIF2AK4	0	genome.wustl.edu	37	15	40309342	40309342	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	40309342	40309342	C	T	SNP	EIF2AK4	ENST00000263791	human	ensembl	74_37	+1	known	nonsense	c.3964	p.Q1322*	1.000	pirsf_Ser/Thr_kinase_GCN2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RWD-domain,superfamily_Kinase-like_dom,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Anticodon-bd,smart_RWD-domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_GCN2,pfscan_RWD-domain,pfscan_Prot_kinase_dom	-	no_errors	EIF2AK4	HGNC	ENSG00000128829	tier1	-	-	76	0	0.00	74	4	5.13
EIF2AK4	0	genome.wustl.edu	37	15	40326639	40326639	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	40326639	40326639	A	-	DEL	EIF2AK4	ENST00000263791	human	ensembl	74_37	+1	known	frame_shift_del	c.4886	p.K1631fs	1.000	pirsf_Ser/Thr_kinase_GCN2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RWD-domain,superfamily_Kinase-like_dom,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Anticodon-bd,smart_RWD-domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_GCN2,pfscan_RWD-domain,pfscan_Prot_kinase_dom	-	no_errors	EIF2AK4	HGNC	ENSG00000128829	tier1			66	0	0.00	45	22	32.84
EIF2D	0	genome.wustl.edu	37	1	206765123	206765123	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	206765123	206765123	G	A	SNP	EIF2D	ENST00000271764	human	ensembl	74_37	-1	known	missense	c.1739	p.P580L	1.000	NULL	pfam_TIF_SUI1,superfamily_TIF_SUI1,superfamily_SWIB_MDM2_domain,superfamily_PUA-like_domain,smart_PUA,pfscan_PUA,pfscan_TIF_SUI1	-	no_errors	EIF2D	HGNC	ENSG00000143486	tier1	-	-	87	0	0.00	101	27	21.09
EIF4B	0	genome.wustl.edu	37	12	53400172	53400172	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	53400172	53400172	C	-	DEL	EIF4B	ENST00000551527	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	EIF4B	HGNC	ENSG00000063046	tier1			50	0	0.00	38	11	22.45
EIF4E1B	0	genome.wustl.edu	37	5	176070674	176070674	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	176070674	176070674	C	T	SNP	EIF4E1B	ENST00000318682	human	ensembl	74_37	+1	known	missense	c.235	p.R79W	1.000	pfam_TIF_eIF_4E,superfamily_TIF_eIF4e-like_dom	pfam_TIF_eIF_4E,superfamily_TIF_eIF4e-like_dom	-	no_errors	EIF4E1B	HGNC	ENSG00000175766	tier1	-	-	56	0	0.00	30	29	49.15
EIF4EBP2	0	genome.wustl.edu	37	10	72179687	72179687	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	72179687	72179687	G	T	SNP	EIF4EBP2	ENST00000373218	human	ensembl	74_37	+1	known	missense	c.163	p.D55Y	1.000	pfam_EIF4EBP	pfam_EIF4EBP	-	no_errors	EIF4EBP2	HGNC	ENSG00000148730				28	0	0.00	32	3	8.57
EIF4G1	0	genome.wustl.edu	37	3	184045617	184045617	+	Splice_Site	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	184045617	184045617	G	T	SNP	EIF4G1	ENST00000352767	human	ensembl	74_37	+1	known	splice_site	c.3802-1	e25-1	1.000	-	-	-	no_errors	EIF4G1	HGNC	ENSG00000114867				22	0	0.00	21	2	8.70
ELAVL1	0	genome.wustl.edu	37	19	8028566	8028566	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	8028566	8028566	C	A	SNP	ELAVL1	ENST00000351593	human	ensembl	74_37	-1	known	missense	c.863	p.W288L	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL1	HGNC	ENSG00000066044	tier1	-	-	50	0	0.00	27	19	41.30
ELAVL2	0	genome.wustl.edu	37	9	23692567	23692567	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	23692567	23692567	C	T	SNP	ELAVL2	ENST00000380117	human	ensembl	74_37	-1	known	silent	c.1068	p.T356	1.000	tigrfam_ELAD_HUD_SF	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL2	HGNC	ENSG00000107105	tier1	-	-	27	0	0.00	29	14	32.56
ELAVL3	0	genome.wustl.edu	37	19	11591485	11591485	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	11591485	11591485	G	-	DEL	ELAVL3	ENST00000592218	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.999	-	-	-	no_errors	ELAVL3	HGNC	ENSG00000196361	tier1			62	0	0.00	33	29	46.77
ELL2	0	genome.wustl.edu	37	5	95297452	95297452	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	95297452	95297452	G	A	SNP	ELL2	ENST00000506628	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ELL2	HGNC	ENSG00000118985	tier1	-	-	19	0	0.00	7	6	42.86
ELMO2	0	genome.wustl.edu	37	20	45014792	45014792	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	45014792	45014792	G	A	SNP	ELMO2	ENST00000439931	human	ensembl	74_37	-1	known	silent	c.648	p.T216	1.000	pfam_DUF3361,superfamily_ARM-type_fold	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO2	HGNC	ENSG00000062598	tier1	rs145510870	-	30	0	0.00	19	6	24.00
ELMO3	0	genome.wustl.edu	37	16	67236803	67236803	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	67236803	67236803	G	A	SNP	ELMO3	ENST00000393997	human	ensembl	74_37	+1	known	missense	c.1730	p.R577Q	1.000	NULL	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO3	HGNC	ENSG00000102890	tier1	-	-	52	0	0.00	20	20	50.00
ELMSAN1	0	genome.wustl.edu	37	14	74205773	74205773	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	74205773	74205773	G	-	DEL	ELMSAN1	ENST00000286523	human	ensembl	74_37	-1	known	frame_shift_del	c.939	p.N314fs	0.000	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	ELMSAN1	HGNC	ENSG00000156030	tier1			50	0	0.00	14	10	41.67
ELOVL2	0	genome.wustl.edu	37	6	10995330	10995330	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	10995330	10995330	T	-	DEL	ELOVL2	ENST00000354666	human	ensembl	74_37	-1	known	frame_shift_del	c.415	p.T139fs	1.000	pfam_GNS1_SUR4	pfam_GNS1_SUR4	-	no_errors	ELOVL2	HGNC	ENSG00000197977	tier1			54	0	0.00	31	5	13.89
ELP2	0	genome.wustl.edu	37	18	33725927	33725927	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	33725927	33725927	G	T	SNP	ELP2	ENST00000358232	human	ensembl	74_37	+1	known	missense	c.909	p.Q303H	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	ELP2	HGNC	ENSG00000134759	tier1	-	-	37	0	0.00	56	5	8.20
ELP3	0	genome.wustl.edu	37	8	27987107	27987107	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	27987107	27987107	T	C	SNP	ELP3	ENST00000256398	human	ensembl	74_37	+1	known	silent	c.706	p.L236	1.000	pfam_rSAM,smart_Elp3/MiaB/NifB,pirsf_Hist_AcTrfase_ELP3,tigrfam_Hist_AcTrfase_ELP3	pfam_rSAM,pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,smart_Elp3/MiaB/NifB,pirsf_Hist_AcTrfase_ELP3,pfscan_GNAT_dom,tigrfam_Hist_AcTrfase_ELP3	-	no_errors	ELP3	HGNC	ENSG00000134014	tier1	-	-	84	0	0.00	101	28	21.71
ELP4	0	genome.wustl.edu	37	11	31561258	31561258	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	31561258	31561258	G	T	SNP	ELP4	ENST00000395934	human	ensembl	74_37	+1	known	silent	c.309	p.L103	1.000	pfam_Elongator_complex_protein_4	pfam_Elongator_complex_protein_4,superfamily_P-loop_NTPase	-	no_errors	ELP4	HGNC	ENSG00000109911	tier1	-	-	63	0	0.00	45	4	8.16
EMC3	0	genome.wustl.edu	37	3	10015329	10015329	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	10015329	10015329	G	T	SNP	EMC3	ENST00000245046	human	ensembl	74_37	-1	known	silent	c.477	p.L159	0.942	pfam_DUF106_TM,pirsf_UCP010045_TM_euk	pfam_DUF106_TM,pirsf_UCP010045_TM_euk	-	no_errors	EMC3	HGNC	ENSG00000125037	tier1	-	-	73	0	0.00	70	4	5.41
EMX2	0	genome.wustl.edu	37	10	119305214	119305214	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	119305214	119305214	G	A	SNP	EMX2	ENST00000553456	human	ensembl	74_37	+1	known	missense	c.478	p.A160T	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_HTH_motif	-	no_errors	EMX2	HGNC	ENSG00000170370	tier1	-	-	88	0	0.00	45	35	43.75
ENKUR	0	genome.wustl.edu	37	10	25288338	25288339	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	25288338	25288339	AG	-	DEL	ENKUR	ENST00000331161	human	ensembl	74_37	-1	known	frame_shift_del	c.215_214	p.L72fs	0.376:0.161	NULL	NULL	-	no_errors	ENKUR	HGNC	ENSG00000151023	tier1			45	0	0.00	39	35	47.30
ENO1	0	genome.wustl.edu	37	1	8927293	8927293	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	8927293	8927293	G	A	SNP	ENO1	ENST00000234590	human	ensembl	74_37	-1	known	silent	c.327	p.N109	0.971	pfam_Enolase_N,pirsf_Enolase,prints_Enolase,tigrfam_Enolase	pfam_Enolase_C,pfam_Enolase_N,pirsf_Enolase,prints_Enolase,tigrfam_Enolase	-	no_errors	ENO1	HGNC	ENSG00000074800	tier1	-	-	52	0	0.00	29	18	38.30
ENO4	0	genome.wustl.edu	37	10	118618628	118618628	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	118618628	118618628	A	-	DEL	ENO4	ENST00000341276	human	ensembl	74_37	+1	known	frame_shift_del	c.616	p.K208fs	0.942	NULL	pfam_Enolase_C,pfam_Enolase_N	-	no_errors	ENO4	HGNC	ENSG00000188316	tier1			55	0	0.00	36	30	45.45
ENPP3	0	genome.wustl.edu	37	6	132043497	132043497	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	132043497	132043497	T	C	SNP	ENPP3	ENST00000357639	human	ensembl	74_37	+1	known	silent	c.1698	p.N566	0.051	NULL	pfam_Phosphodiest/P_Trfase,pfam_Somatomedin_B_dom,pfam_DNA/RNA_non-sp_Endonuclease,superfamily_Alkaline_phosphatase_core,smart_Somatomedin_B_dom,smart_DNA/RNA_non-sp_Endonuclease,smart_Extracellular_endonuc_su_A,pfscan_Somatomedin_B_dom	-	no_errors	ENPP3	HGNC	ENSG00000154269	tier1	-	-	112	0	0.00	78	7	8.24
ENSG00000188850	0	genome.wustl.edu	37	5	43348817	43348820	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	43348817	43348820	AAAA	-	DEL	ENSG00000188850	ENST00000511991	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001:0.002:0.003	-	-	-	no_errors	RP11-159F24.2	Clone_based_vega_gene	ENSG00000188850	tier1			13	0	0.00	16	14	46.67
ENSG00000188971	0	genome.wustl.edu	37	2	69693391	69693392	+	RNA	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	69693391	69693392	-	G	INS	ENSG00000188971	ENST00000339092	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.417:0.405	-	-	-	no_errors	RP11-427H3.3	Clone_based_vega_gene	ENSG00000188971	tier1			50	0	0.00	25	10	28.57
ENSG00000200630	0	genome.wustl.edu	37	8	13017741	13017741	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	13017741	13017741	T	-	DEL	ENSG00000200630	ENST00000363760	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.567	-	-	-	no_errors	Y_RNA	RFAM	ENSG00000200630	tier1			10	0	0.00	7	3	30.00
ENSG00000203394	0	genome.wustl.edu	37	1	21069616	21069617	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	21069616	21069617	TT	-	DEL	ENSG00000203394	ENST00000413451	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	RP5-930J4.4	Clone_based_vega_gene	ENSG00000203394	tier1			20	0	0.00	18	7	28.00
ENSG00000204791	0	genome.wustl.edu	37	8	145104649	145104649	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	145104649	145104649	C	T	SNP	ENSG00000204791	ENST00000528912	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.055	-	-	-	no_errors	CTD-3065J16.6	Clone_based_vega_gene	ENSG00000204791	tier1	-	-	16	0	0.00	9	7	43.75
ENSG00000206113	0	genome.wustl.edu	37	4	2428672	2428672	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	2428672	2428672	C	T	SNP	ENSG00000206113	ENST00000382849	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-503N18.1	Clone_based_vega_gene	ENSG00000206113	tier1	-	-	91	0	0.00	38	25	39.68
ENSG00000206567	0	genome.wustl.edu	37	3	10048499	10048499	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	10048499	10048499	G	T	SNP	ENSG00000206567	ENST00000383808	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	AC022007.5	Clone_based_vega_gene	ENSG00000206567	tier1	-	-	36	0	0.00	18	18	50.00
ENSG00000211518	0	genome.wustl.edu	37	7	88269891	88269893	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	88269891	88269893	TTT	-	DEL	ENSG00000211518	ENST00000390184	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.475:0.436:0.392	-	-	-	no_errors	AC006988.1	Clone_based_ensembl_gene	ENSG00000211518	tier1			21	0	0.00	10	14	58.33
ENSG00000212857	0	genome.wustl.edu	37	GL000212.1	65790	65790	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	GL000212.1	65790	65790	G	A	SNP	ENSG00000212857	ENST00000391545	human	ensembl	74_37	+1	known	silent	c.1539	p.T513	NULL	NULL	NULL	-	no_errors	AL356585.1	Clone_based_ensembl_gene	ENSG00000212857	tier1	-	-	89	0	0.00	68	25	26.88
ENSG00000212999	0	genome.wustl.edu	37	8	93897074	93897075	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	93897074	93897075	-	G	INS	ENSG00000212999	ENST00000391681	human	ensembl	74_37	+1	novel	frame_shift_ins	c.32_33	p.W14fs	0.969:0.807	NULL	NULL	-	no_errors	AC117834.1	Clone_based_ensembl_gene	ENSG00000212999	tier1			21	0	0.00	33	11	25.00
ENSG00000213225	0	genome.wustl.edu	37	2	130989054	130989054	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	130989054	130989054	C	T	SNP	ENSG00000213225	ENST00000450578	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.719	-	-	-	no_errors	AC018804.7	Clone_based_vega_gene	ENSG00000213225	tier1	-	-	78	0	0.00	43	30	41.10
ENSG00000214797	0	genome.wustl.edu	37	11	59038011	59038012	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	59038011	59038012	AA	-	DEL	ENSG00000214797	ENST00000399003	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-1036E20.9	Clone_based_vega_gene	ENSG00000214797	tier1			25	0	0.00	10	18	64.29
ENSG00000216022	0	genome.wustl.edu	37	10	53399574	53399574	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	53399574	53399574	G	A	SNP	ENSG00000216022	ENST00000401203	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	AC068062.1	Clone_based_ensembl_gene	ENSG00000216022	tier1	-	-	22	0	0.00	6	7	53.85
ENSG00000216037	0	genome.wustl.edu	37	1	95970583	95970583	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	95970583	95970583	A	-	DEL	ENSG00000216037	ENST00000401218	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.009	-	-	-	no_errors	AL356479.1	Clone_based_ensembl_gene	ENSG00000216037	tier1			49	0	0.00	31	27	46.55
ENSG00000216113	0	genome.wustl.edu	37	8	104863916	104863916	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	104863916	104863916	C	T	SNP	ENSG00000216113	ENST00000401294	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AP001572.1	Clone_based_ensembl_gene	ENSG00000216113	tier1	-	-	22	0	0.00	10	7	41.18
ENSG00000221060	0	genome.wustl.edu	37	14	70270922	70270922	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	70270922	70270922	T	-	DEL	ENSG00000221060	ENST00000408133	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.003	-	-	-	no_errors	SNORA11	RFAM	ENSG00000221060	tier1			16	0	0.00	9	11	55.00
ENSG00000221219	0	genome.wustl.edu	37	4	54969778	54969778	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	54969778	54969778	G	A	SNP	ENSG00000221219	ENST00000408292	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.002	-	-	-	no_errors	AC110298.1	Clone_based_ensembl_gene	ENSG00000221219	tier1	rs28628203	-	67	0	0.00	35	15	30.00
ENSG00000221244	0	genome.wustl.edu	37	5	1004312	1004312	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	1004312	1004312	T	-	DEL	ENSG00000221244	ENST00000408317	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.050	-	-	-	no_errors	AC116351.2	Clone_based_ensembl_gene	ENSG00000221244	tier1			47	0	0.00	45	14	23.73
ENSG00000221734	0	genome.wustl.edu	37	9	117554475	117554476	+	RNA	DEL	GT	GT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	117554475	117554476	GT	-	DEL	ENSG00000221734	ENST00000408807	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.007:0.006	-	-	-	no_errors	AL390240.1	Clone_based_ensembl_gene	ENSG00000221734	tier1			15	0	0.00	7	3	30.00
ENSG00000222899	0	genome.wustl.edu	37	14	27396917	27396919	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	27396917	27396919	AAA	-	DEL	ENSG00000222899	ENST00000410967	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000:0.001:0.000	-	-	-	no_errors	AL110292.1	Clone_based_ensembl_gene	ENSG00000222899	tier1			122	0	0.00	120	40	25.00
ENSG00000223231	0	genome.wustl.edu	37	1	84259638	84259638	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	84259638	84259638	A	-	DEL	ENSG00000223231	ENST00000411299	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.062	-	-	-	no_errors	AL035706.1	Clone_based_ensembl_gene	ENSG00000223231	tier1			11	0	0.00	7	13	65.00
ENSG00000223697	0	genome.wustl.edu	37	8	133854715	133854717	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	133854715	133854717	TTT	-	DEL	ENSG00000223697	ENST00000608375	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.002:0.000	-	-	-	no_errors	AF230666.2	Clone_based_vega_gene	ENSG00000223697	tier1			16	0	0.00	16	25	60.98
ENSG00000224666	0	genome.wustl.edu	37	6	36359695	36359698	+	RNA	DEL	TTTA	TTTA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTA	TTTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	36359695	36359698	TTTA	-	DEL	ENSG00000224666	ENST00000411643	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001:0.002:0.005	-	-	-	no_errors	RP1-50J22.4	Clone_based_vega_gene	ENSG00000224666	tier1			20	0	0.00	7	7	50.00
ENSG00000225241	0	genome.wustl.edu	37	1	144598579	144598579	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	144598579	144598579	C	T	SNP	ENSG00000225241	ENST00000419820	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-640M9.2	Clone_based_vega_gene	ENSG00000225241	tier1	-	-	57	0	0.00	52	7	11.86
ENSG00000225782	0	genome.wustl.edu	37	1	220836379	220836379	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	220836379	220836379	G	T	SNP	ENSG00000225782	ENST00000446040	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-322F10.2	Clone_based_vega_gene	ENSG00000225782	tier1	-	-	55	0	0.00	67	6	8.22
ENSG00000226849	0	genome.wustl.edu	37	1	11132251	11132251	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	11132251	11132251	A	-	DEL	ENSG00000226849	ENST00000452378	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP4-635E18.7	Clone_based_vega_gene	ENSG00000226849	tier1			38	0	0.00	16	15	48.39
ENSG00000228172	0	genome.wustl.edu	37	1	26143253	26143253	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	26143253	26143253	T	-	DEL	ENSG00000228172	ENST00000442055	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP1-317E23.3	Clone_based_vega_gene	ENSG00000228172	tier1			52	0	0.00	39	15	27.78
ENSG00000228189	0	genome.wustl.edu	37	9	91262294	91262294	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	91262294	91262294	C	T	SNP	ENSG00000228189	ENST00000418343	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP13-60M5.2	Clone_based_vega_gene	ENSG00000228189	tier1	-	-	89	0	0.00	38	36	48.65
ENSG00000228436	0	genome.wustl.edu	37	1	39341838	39341838	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	39341838	39341838	G	T	SNP	ENSG00000228436	ENST00000443161	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.277	-	-	-	no_errors	RP5-864K19.4	Clone_based_vega_gene	ENSG00000228436	tier1	-	-	70	0	0.00	45	5	10.00
ENSG00000229481	0	genome.wustl.edu	37	19	38321455	38321455	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	38321455	38321455	C	T	SNP	ENSG00000229481	ENST00000443870	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	CTD-2554C21.3	Clone_based_vega_gene	ENSG00000229481	tier1	-	-	45	0	0.00	25	22	46.81
ENSG00000230490	0	genome.wustl.edu	37	13	34098474	34098475	+	RNA	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	34098474	34098475	-	T	INS	ENSG00000230490	ENST00000454681	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004:0.002	-	-	-	no_errors	RP11-141M1.3	Clone_based_vega_gene	ENSG00000230490	tier1			25	0	0.00	19	9	32.14
ENSG00000230615	0	genome.wustl.edu	37	1	44569721	44569721	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	44569721	44569721	G	A	SNP	ENSG00000230615	ENST00000434244	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	RP5-1198O20.4	Clone_based_vega_gene	ENSG00000230615	tier1	-	-	36	0	0.00	22	23	51.11
ENSG00000231345	0	genome.wustl.edu	37	10	52419262	52419262	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	52419262	52419262	C	T	SNP	ENSG00000231345	ENST00000449695	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.951	-	-	-	no_errors	RP11-564C4.6	Clone_based_vega_gene	ENSG00000231345	tier1	-	-	25	0	0.00	12	8	40.00
ENSG00000232043	0	genome.wustl.edu	37	20	49191303	49191303	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	49191303	49191303	C	T	SNP	ENSG00000232043	ENST00000431019	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP4-530I15.9	Clone_based_vega_gene	ENSG00000232043	tier1	-	-	15	0	0.00	13	11	45.83
ENSG00000232220	0	genome.wustl.edu	37	19	54378026	54378029	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	54378026	54378029	TTTT	-	DEL	ENSG00000232220	ENST00000413496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000:0.000	-	-	-	no_errors	AC008440.5	Clone_based_vega_gene	ENSG00000232220	tier1			98	0	0.00	71	12	14.46
ENSG00000232220	0	genome.wustl.edu	37	19	54378033	54378033	+	RNA	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	54378033	54378033	T	C	SNP	ENSG00000232220	ENST00000413496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC008440.5	Clone_based_vega_gene	ENSG00000232220	tier1	rs1143256	-	87	0	0.00	66	15	18.52
ENSG00000232220	0	genome.wustl.edu	37	19	54379104	54379105	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	54379104	54379105	AA	-	DEL	ENSG00000232220	ENST00000413496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC008440.5	Clone_based_vega_gene	ENSG00000232220	tier1			16	0	0.00	8	4	33.33
ENSG00000232335	0	genome.wustl.edu	37	1	36208989	36208989	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	36208989	36208989	A	-	DEL	ENSG00000232335	ENST00000373226	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-435D7.3	Clone_based_vega_gene	ENSG00000232335	tier1			63	0	0.00	39	16	29.09
ENSG00000232532	0	genome.wustl.edu	37	6	90630851	90630851	+	RNA	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	90630851	90630851	T	G	SNP	ENSG00000232532	ENST00000458201	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-63K6.7	Clone_based_vega_gene	ENSG00000232532	tier1	-	-	49	0	0.00	36	18	33.33
ENSG00000232783	0	genome.wustl.edu	37	3	197838274	197838276	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	197838274	197838276	AAA	-	DEL	ENSG00000232783	ENST00000411596	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001:0.001	-	-	-	no_errors	AC073135.3	Clone_based_vega_gene	ENSG00000232783	tier1			16	0	0.00	27	5	15.62
ENSG00000233030	0	genome.wustl.edu	37	1	149764212	149764213	+	RNA	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	149764212	149764213	-	G	INS	ENSG00000233030	ENST00000428289	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	RP11-196G18.3	Clone_based_vega_gene	ENSG00000233030	tier1			8	0	0.00	12	5	29.41
ENSG00000234117	0	genome.wustl.edu	37	6	116818039	116818039	+	RNA	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	116818039	116818039	T	A	SNP	ENSG00000234117	ENST00000420595	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-259P20.1	Clone_based_vega_gene	ENSG00000234117	tier1	-	-	42	0	0.00	28	16	36.36
ENSG00000234277	0	genome.wustl.edu	37	1	227618299	227618299	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	227618299	227618299	A	-	DEL	ENSG00000234277	ENST00000445817	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTD-2090I13.1	Clone_based_vega_gene	ENSG00000234277	tier1			35	0	0.00	38	16	29.63
ENSG00000234484	0	genome.wustl.edu	37	6	133073948	133073948	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	133073948	133073948	A	-	DEL	ENSG00000234484	ENST00000430895	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.029	-	-	-	no_errors	RP1-55C23.7	Clone_based_vega_gene	ENSG00000234484	tier1			10	0	0.00	11	3	21.43
ENSG00000234921	0	genome.wustl.edu	37	9	126794643	126794643	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	126794643	126794643	G	-	DEL	ENSG00000234921	ENST00000429482	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-85O21.5	Clone_based_vega_gene	ENSG00000234921	tier1			17	0	0.00	13	6	31.58
ENSG00000236817	0	genome.wustl.edu	37	1	247729207	247729209	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	247729207	247729209	TTT	-	DEL	ENSG00000236817	ENST00000435333	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.001	-	-	-	no_errors	RP11-978I15.10	Clone_based_vega_gene	ENSG00000236817	tier1			31	0	0.00	58	9	13.43
ENSG00000236986	0	genome.wustl.edu	37	9	134008392	134008392	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	134008392	134008392	T	-	DEL	ENSG00000236986	ENST00000587264	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-544A12.4	Clone_based_vega_gene	ENSG00000236986	tier1			16	0	0.00	12	9	42.86
ENSG00000241358	0	genome.wustl.edu	37	3	146119248	146119248	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	146119248	146119248	G	A	SNP	ENSG00000241358	ENST00000490344	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-758I14.3	Clone_based_vega_gene	ENSG00000241358	tier1	-	-	68	0	0.00	28	26	48.15
ENSG00000242048	0	genome.wustl.edu	37	7	151504031	151504031	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	151504031	151504031	A	-	DEL	ENSG00000242048	ENST00000462083	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP13-452N2.1	Clone_based_vega_gene	ENSG00000242048	tier1			25	0	0.00	16	5	23.81
ENSG00000242288	0	genome.wustl.edu	37	10	75434061	75434061	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	75434061	75434061	C	A	SNP	ENSG00000242288	ENST00000399449	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	RP11-464F9.1	Clone_based_vega_gene	ENSG00000242288	tier1	-	-	44	0	0.00	69	9	11.54
ENSG00000243008	0	genome.wustl.edu	37	13	25157681	25157681	+	RNA	SNP	G	G	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	25157681	25157681	G	C	SNP	ENSG00000243008	ENST00000453498	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.881	-	-	-	no_errors	RP11-556N21.1	Clone_based_vega_gene	ENSG00000243008	tier1	-	-	143	0	0.00	173	12	6.49
ENSG00000245156	0	genome.wustl.edu	37	11	66039143	66039143	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	66039143	66039143	A	-	DEL	ENSG00000245156	ENST00000501708	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.020	-	-	-	no_errors	RP11-867G23.3	Clone_based_vega_gene	ENSG00000245156	tier1			22	0	0.00	10	31	75.61
ENSG00000246790	0	genome.wustl.edu	37	11	121323408	121323408	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	121323408	121323408	C	A	SNP	ENSG00000246790	ENST00000501964	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.083	-	-	-	no_errors	RP11-730K11.1	Clone_based_vega_gene	ENSG00000246790	tier1	-	-	54	0	0.00	21	18	46.15
ENSG00000247373	0	genome.wustl.edu	37	12	124069475	124069475	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	124069475	124069475	C	A	SNP	ENSG00000247373	ENST00000498967	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.603	-	-	-	no_errors	RP11-486O12.2	Clone_based_vega_gene	ENSG00000247373	tier1	-	-	23	0	0.00	13	10	43.48
ENSG00000248015	0	genome.wustl.edu	37	19	1395345	1395345	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	1395345	1395345	C	T	SNP	ENSG00000248015	ENST00000501448	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC005329.7	Clone_based_vega_gene	ENSG00000248015	tier1	-	-	11	0	0.00	6	8	57.14
ENSG00000248245	0	genome.wustl.edu	37	5	132559937	132559937	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	132559937	132559937	G	T	SNP	ENSG00000248245	ENST00000502776	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	CTB-49A3.2	Clone_based_vega_gene	ENSG00000248245	tier1	-	-	72	0	0.00	55	4	6.78
ENSG00000248840	0	genome.wustl.edu	37	4	3314643	3314644	+	RNA	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	3314643	3314644	-	A	INS	ENSG00000248840	ENST00000600073	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.004	-	-	-	no_errors	RP11-357G3.2	Clone_based_vega_gene	ENSG00000248840	tier1			19	0	0.00	13	6	31.58
ENSG00000249428	0	genome.wustl.edu	37	4	2453979	2453979	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	2453979	2453979	G	A	SNP	ENSG00000249428	ENST00000506607	human	ensembl	74_37	+1	putative	missense	c.302	p.R101Q	0.999	NULL	NULL	-	no_errors	RP11-503N18.3	Clone_based_vega_gene	ENSG00000249428	tier1	-	-	60	0	0.00	30	30	50.00
ENSG00000251095	0	genome.wustl.edu	37	4	90647546	90647546	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	90647546	90647546	A	-	DEL	ENSG00000251095	ENST00000508021	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-115D19.1	Clone_based_vega_gene	ENSG00000251095	tier1			24	0	0.00	25	7	21.88
ENSG00000251429	0	genome.wustl.edu	37	4	159198967	159198967	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	159198967	159198967	G	A	SNP	ENSG00000251429	ENST00000512016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.114	-	-	-	no_errors	RP11-597D13.7	Clone_based_vega_gene	ENSG00000251429	tier1	-	-	41	0	0.00	12	13	52.00
ENSG00000251680	0	genome.wustl.edu	37	5	129098338	129098338	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	129098338	129098338	C	T	SNP	ENSG00000251680	ENST00000503616	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	CTC-575N7.1	Clone_based_vega_gene	ENSG00000251680	tier1	-	-	95	0	0.00	60	32	34.78
ENSG00000252176	0	genome.wustl.edu	37	8	39418478	39418483	+	RNA	DEL	TGTGTG	TGTGTG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TGTGTG	TGTGTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	39418478	39418483	TGTGTG	0	DEL	ENSG00000252176	ENST00000516367	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000:0.000:0.000:0.000:0.000:0.000	-	-	-	no_errors	AC123767.1	Clone_based_ensembl_gene	ENSG00000252176				22	0	0.00	28	16	36.36
ENSG00000252664	0	genome.wustl.edu	37	Y	18174668	18174668	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	Y	18174668	18174668	G	A	SNP	ENSG00000252664	ENST00000516855	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.263	-	-	-	no_errors	AC017020.1	Clone_based_ensembl_gene	ENSG00000252664	tier1	-	-	12	0	0.00	2	10	83.33
ENSG00000253334	0	genome.wustl.edu	37	8	82727641	82727641	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	82727641	82727641	A	-	DEL	ENSG00000253334	ENST00000524337	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.496	-	-	-	no_errors	RP13-923O23.6	Clone_based_vega_gene	ENSG00000253334	tier1			28	0	0.00	14	10	41.67
ENSG00000253722	0	genome.wustl.edu	37	8	94745547	94745548	+	RNA	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	94745547	94745548	-	A	INS	ENSG00000253722	ENST00000517998	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	RP11-10N23.4	Clone_based_vega_gene	ENSG00000253722	tier1			16	0	0.00	8	3	27.27
ENSG00000253917	0	genome.wustl.edu	37	4	3923361	3923361	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	3923361	3923361	G	-	DEL	ENSG00000253917	ENST00000514073	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.471	-	-	-	no_errors	AC226119.5	Clone_based_vega_gene	ENSG00000253917	tier1			64	0	0.00	28	13	31.71
ENSG00000254154	0	genome.wustl.edu	37	1	177898421	177898421	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	177898421	177898421	A	-	DEL	ENSG00000254154	ENST00000354921	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.047	-	-	-	no_errors	RP4-798P15.3	Clone_based_vega_gene	ENSG00000254154	tier1			19	0	0.00	7	6	46.15
ENSG00000254420	0	genome.wustl.edu	37	11	78154811	78154812	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	78154811	78154812	AA	-	DEL	ENSG00000254420	ENST00000534168	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.006	-	-	-	no_errors	RP11-452H21.1	Clone_based_vega_gene	ENSG00000254420	tier1			30	0	0.00	11	22	66.67
ENSG00000254741	0	genome.wustl.edu	37	8	144662012	144662012	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	144662012	144662012	C	T	SNP	ENSG00000254741	ENST00000529247	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-661A12.7	Clone_based_vega_gene	ENSG00000254741	tier1	-	-	58	0	0.00	51	23	31.08
ENSG00000257042	0	genome.wustl.edu	37	12	28122681	28122681	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	28122681	28122681	A	-	DEL	ENSG00000257042	ENST00000538113	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-993B23.3	Clone_based_vega_gene	ENSG00000257042	tier1			33	0	0.00	43	11	20.37
ENSG00000257434	0	genome.wustl.edu	37	12	75434784	75434784	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	75434784	75434784	G	T	SNP	ENSG00000257434	ENST00000547040	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.980	-	-	-	no_errors	RP11-81K13.1	Clone_based_vega_gene	ENSG00000257434	tier1	-	-	53	0	0.00	59	4	6.35
ENSG00000257434	0	genome.wustl.edu	37	12	75435987	75435988	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	75435987	75435988	TT	-	DEL	ENSG00000257434	ENST00000547040	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005:0.007	-	-	-	no_errors	RP11-81K13.1	Clone_based_vega_gene	ENSG00000257434	tier1			19	0	0.00	14	11	44.00
ENSG00000257769	0	genome.wustl.edu	37	16	15702390	15702390	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	15702390	15702390	G	-	DEL	ENSG00000257769	ENST00000549756	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTB-193M12.1	Clone_based_vega_gene	ENSG00000257769	tier1			35	0	0.00	18	13	41.94
ENSG00000257913	0	genome.wustl.edu	37	12	49412241	49412241	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	49412241	49412241	G	A	SNP	ENSG00000257913	ENST00000547395	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-386G11.5	Clone_based_vega_gene	ENSG00000257913	tier1	-	-	54	0	0.00	26	13	33.33
ENSG00000257913	0	genome.wustl.edu	37	12	49412461	49412461	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	49412461	49412461	G	-	DEL	ENSG00000257913	ENST00000547395	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.377	-	-	-	no_errors	RP11-386G11.5	Clone_based_vega_gene	ENSG00000257913	tier1			56	0	0.00	26	22	45.83
ENSG00000258727	0	genome.wustl.edu	37	14	24034973	24034974	+	RNA	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	24034973	24034974	-	C	INS	ENSG00000258727	ENST00000555968	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-66N24.3	Clone_based_vega_gene	ENSG00000258727	tier1			40	0	0.00	20	7	25.93
ENSG00000258745	0	genome.wustl.edu	37	14	51379086	51379087	+	RNA	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	51379086	51379087	-	T	INS	ENSG00000258745	ENST00000557343	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.329:0.559	-	-	-	no_errors	RP11-218E20.5	Clone_based_vega_gene	ENSG00000258745	tier1			12	0	0.00	7	2	22.22
ENSG00000258908	0	genome.wustl.edu	37	14	20943125	20943125	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	20943125	20943125	T	-	DEL	ENSG00000258908	ENST00000554678	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP11-203M5.8	Clone_based_vega_gene	ENSG00000258908	tier1			40	0	0.00	30	9	23.08
ENSG00000259180	0	genome.wustl.edu	37	15	55972661	55972663	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	55972661	55972663	TTT	-	DEL	ENSG00000259180	ENST00000561155	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	RP11-420M1.2	Clone_based_vega_gene	ENSG00000259180	tier1			15	0	0.00	10	11	52.38
ENSG00000259211	0	genome.wustl.edu	37	15	40756486	40756486	+	RNA	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	40756486	40756486	T	G	SNP	ENSG00000259211	ENST00000559730	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-64K12.8	Clone_based_vega_gene	ENSG00000259211	tier1	-	-	15	0	0.00	3	4	57.14
ENSG00000259241	0	genome.wustl.edu	37	15	51987960	51987960	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	51987960	51987960	A	-	DEL	ENSG00000259241	ENST00000559918	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	RP11-313P18.2	Clone_based_vega_gene	ENSG00000259241	tier1			23	0	0.00	27	2	6.90
ENSG00000260415	0	genome.wustl.edu	37	12	52204038	52204039	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	52204038	52204039	-	A	INS	ENSG00000260415	ENST00000599343	human	ensembl	74_37	+1	known	frame_shift_ins	c.80_81	p.K31fs	0.000:0.001	NULL	NULL	-	no_errors	AC068987.1	Clone_based_ensembl_gene	ENSG00000260415	tier1			27	0	0.00	21	12	36.36
ENSG00000260465	0	genome.wustl.edu	37	16	66755236	66755236	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	66755236	66755236	T	-	DEL	ENSG00000260465	ENST00000569274	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.712	-	-	-	no_errors	RP11-63M22.2	Clone_based_vega_gene	ENSG00000260465	tier1			36	0	0.00	18	16	47.06
ENSG00000260628	0	genome.wustl.edu	37	16	31998189	31998189	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	31998189	31998189	C	A	SNP	ENSG00000260628	ENST00000568570	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-1166P10.1	Clone_based_vega_gene	ENSG00000260628	tier1	-	-	75	0	0.00	40	26	39.39
ENSG00000261238	0	genome.wustl.edu	37	16	51183171	51183171	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	51183171	51183171	T	-	DEL	ENSG00000261238	ENST00000570060	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	AC009166.5	Clone_based_vega_gene	ENSG00000261238	tier1			9	0	0.00	10	8	44.44
ENSG00000261286	0	genome.wustl.edu	37	16	84493954	84493954	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	84493954	84493954	G	-	DEL	ENSG00000261286	ENST00000565700	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-517C16.2	Clone_based_vega_gene	ENSG00000261286	tier1			74	0	0.00	84	10	10.64
ENSG00000261317	0	genome.wustl.edu	37	16	90038592	90038592	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	90038592	90038592	G	A	SNP	ENSG00000261317	ENST00000565150	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-566K11.5	Clone_based_vega_gene	ENSG00000261317	tier1	-	-	55	0	0.00	30	20	40.00
ENSG00000261460	0	genome.wustl.edu	37	15	72638557	72638557	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	72638557	72638557	C	-	DEL	ENSG00000261460	ENST00000570175	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-106M3.3	Clone_based_vega_gene	ENSG00000261460	tier1			32	0	0.00	21	13	38.24
ENSG00000264558	0	genome.wustl.edu	37	17	45760047	45760047	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	45760047	45760047	A	-	DEL	ENSG00000264558	ENST00000578482	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-138C9.1	Clone_based_vega_gene	ENSG00000264558	tier1			26	0	0.00	21	9	30.00
ENSG00000264714	0	genome.wustl.edu	37	18	10727320	10727320	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	10727320	10727320	C	A	SNP	ENSG00000264714	ENST00000581724	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.185	-	-	-	no_errors	RP11-21G15.1	Clone_based_vega_gene	ENSG00000264714	tier1	-	-	19	0	0.00	16	4	20.00
ENSG00000265194	0	genome.wustl.edu	37	9	21861903	21861904	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	21861903	21861904	TT	-	DEL	ENSG00000265194	ENST00000581788	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-70L8.4	Clone_based_vega_gene	ENSG00000265194	tier1			26	0	0.00	6	7	53.85
ENSG00000265209	0	genome.wustl.edu	37	16	57908381	57908382	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	57908381	57908382	AA	-	DEL	ENSG00000265209	ENST00000580935	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC010543.1	Clone_based_ensembl_gene	ENSG00000265209	tier1			23	0	0.00	13	11	45.83
ENSG00000265803	0	genome.wustl.edu	37	6	158596080	158596081	+	RNA	DEL	AC	AC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	158596080	158596081	AC	-	DEL	ENSG00000265803	ENST00000580588	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	AL590703.1	Clone_based_ensembl_gene	ENSG00000265803	tier1			30	0	0.00	20	6	23.08
ENSG00000266002	0	genome.wustl.edu	37	17	57477848	57477849	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	57477848	57477849	TT	-	DEL	ENSG00000266002	ENST00000585190	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.648:0.971	-	-	-	no_errors	RP11-567L7.5	Clone_based_vega_gene	ENSG00000266002	tier1			27	0	0.00	37	10	21.28
ENSG00000266775	0	genome.wustl.edu	37	17	28885005	28885005	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	28885005	28885005	A	-	DEL	ENSG00000266775	ENST00000582125	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	RP11-218M11.6	Clone_based_vega_gene	ENSG00000266775	tier1			68	0	0.00	47	10	17.54
ENSG00000266865	0	genome.wustl.edu	37	17	29349145	29349145	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	29349145	29349145	G	A	SNP	ENSG00000266865	ENST00000579692	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.185	-	-	-	no_errors	RP11-848P1.9	Clone_based_vega_gene	ENSG00000266865	tier1	-	-	27	0	0.00	37	5	11.90
ENSG00000266903	0	genome.wustl.edu	37	19	45202434	45202434	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	45202434	45202434	G	A	SNP	ENSG00000266903	ENST00000590796	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTB-171A8.1	Clone_based_vega_gene	ENSG00000266903	tier1	-	-	40	0	0.00	29	7	19.44
ENSG00000267040	0	genome.wustl.edu	37	18	55335787	55335789	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	55335787	55335789	AAA	-	DEL	ENSG00000267040	ENST00000592201	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	RP11-35G9.3	Clone_based_vega_gene	ENSG00000267040	tier1			24	0	0.00	16	9	36.00
ENSG00000267848	0	genome.wustl.edu	37	20	62585044	62585044	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	62585044	62585044	A	-	DEL	ENSG00000267848	ENST00000595604	human	ensembl	74_37	+1	known	frame_shift_del	c.38	p.K16fs	0.024	NULL	NULL	-	no_errors	AL118506.1	Clone_based_ensembl_gene	ENSG00000267848	tier1			12	0	0.00	7	3	30.00
ENSG00000268163	0	genome.wustl.edu	37	19	57988704	57988704	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	57988704	57988704	C	A	SNP	ENSG00000268163	ENST00000415705	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC004076.9	Clone_based_vega_gene	ENSG00000268163	tier1	-	-	61	0	0.00	44	20	31.25
ENSG00000268241	0	genome.wustl.edu	37	2	175201785	175201785	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	175201785	175201785	G	A	SNP	ENSG00000268241	ENST00000595354	human	ensembl	74_37	-1	known	missense	c.367	p.R123C	1.000	NULL	NULL	-	no_errors	AC018470.1	Clone_based_ensembl_gene	ENSG00000268241	tier1	-	-	20	0	0.00	4	3	42.86
ENSG00000268713	0	genome.wustl.edu	37	19	57773719	57773721	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	57773719	57773721	AAA	-	DEL	ENSG00000268713	ENST00000600047	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.002:0.001	-	-	-	no_errors	CTC-444N24.8	Clone_based_vega_gene	ENSG00000268713	tier1			46	0	0.00	22	41	65.08
ENSG00000269243	0	genome.wustl.edu	37	19	16244264	16244265	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	16244264	16244265	TT	-	DEL	ENSG00000269243	ENST00000599676	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	CTD-2231E14.8	Clone_based_vega_gene	ENSG00000269243	tier1			20	0	0.00	6	15	71.43
ENSG00000269939	0	genome.wustl.edu	37	11	82896644	82896644	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	82896644	82896644	T	-	DEL	ENSG00000269939	ENST00000602322	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-727A23.11	Clone_based_vega_gene	ENSG00000269939	tier1			67	0	0.00	63	32	33.68
ENSG00000270726	0	genome.wustl.edu	37	X	155255058	155255058	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	155255058	155255058	C	-	DEL	ENSG00000270726	ENST00000285718	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.076	-	-	-	no_errors	AJ271736.10	Clone_based_vega_gene	ENSG00000270726	tier1			288	0	0.00	216	29	11.84
ENSG00000271894	0	genome.wustl.edu	37	2	56612188	56612188	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	56612188	56612188	T	-	DEL	ENSG00000271894	ENST00000607540	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-482H16.1	Clone_based_vega_gene	ENSG00000271894	tier1			67	0	0.00	41	17	29.31
ENSG00000272054	0	genome.wustl.edu	37	2	37438026	37438027	+	RNA	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	37438026	37438027	-	C	INS	ENSG00000272054	ENST00000606229	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-423P10.2	Clone_based_vega_gene	ENSG00000272054	tier1			19	0	0.00	17	6	26.09
ENSG00000272179	0	genome.wustl.edu	37	X	119678199	119678199	+	RNA	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	119678199	119678199	T	C	SNP	ENSG00000272179	ENST00000605987	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	snoU13	RFAM	ENSG00000272179	tier1	-	-	12	0	0.00	3	6	66.67
ENSG00000272299	0	genome.wustl.edu	37	13	64411581	64411582	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	64411581	64411582	AA	-	DEL	ENSG00000272299	ENST00000606894	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.288:0.278	-	-	-	no_errors	RP11-394A14.4	Clone_based_vega_gene	ENSG00000272299	tier1			20	0	0.00	9	16	64.00
ENSG00000272842	0	genome.wustl.edu	37	9	19371688	19371688	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	19371688	19371688	A	-	DEL	ENSG00000272842	ENST00000609609	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-513M16.7	Clone_based_vega_gene	ENSG00000272842	tier1			53	0	0.00	33	17	34.00
ENSG00000272913	0	genome.wustl.edu	37	2	96192343	96192343	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	96192343	96192343	G	A	SNP	ENSG00000272913	ENST00000609975	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.058	-	-	-	no_errors	RP11-440D17.3	Clone_based_vega_gene	ENSG00000272913	tier1	-	-	10	0	0.00	2	4	66.67
ENSG00000273192	0	genome.wustl.edu	37	22	50297002	50297002	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	50297002	50297002	G	-	DEL	ENSG00000273192	ENST00000610245	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CITF22-1A6.3	Clone_based_vega_gene	ENSG00000273192	tier1			66	0	0.00	31	11	26.19
ENSG00000273333	0	genome.wustl.edu	37	6	32153476	32153476	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	32153476	32153476	A	-	DEL	ENSG00000273333	ENST00000559458	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	XXbac-BPG300A18.13	Clone_based_vega_gene	ENSG00000273333	tier1			33	0	0.00	17	22	56.41
ENSG00000273443	0	genome.wustl.edu	37	1	998660	998660	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	998660	998660	G	A	SNP	ENSG00000273443	ENST00000442292	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-54O7.18	Clone_based_vega_gene	ENSG00000273443	tier1	-	-	48	0	0.00	32	15	31.91
EOMES	0	genome.wustl.edu	37	3	27761750	27761750	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	27761750	27761750	G	A	SNP	EOMES	ENST00000449599	human	ensembl	74_37	-1	known	silent	c.948	p.F316	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	EOMES	HGNC	ENSG00000163508	tier1	-	-	31	0	0.00	16	9	36.00
EP300	0	genome.wustl.edu	37	22	41574679	41574679	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	41574679	41574679	C	-	DEL	EP300	ENST00000263253	human	ensembl	74_37	+1	known	frame_shift_del	c.6964	p.H2324fs	1.000	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	EP300	HGNC	ENSG00000100393	tier1			50	0	0.00	16	9	36.00
EPG5	0	genome.wustl.edu	37	18	43532399	43532399	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	43532399	43532399	G	T	SNP	EPG5	ENST00000282041	human	ensembl	74_37	-1	known	missense	c.1219	p.L407M	0.972	NULL	NULL	-	no_errors	EPG5	HGNC	ENSG00000152223	tier1	-	-	40	0	0.00	47	4	7.84
EPHA10	0	genome.wustl.edu	37	1	38219906	38219906	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	38219906	38219906	C	T	SNP	EPHA10	ENST00000427468	human	ensembl	74_37	-1	known	silent	c.987	p.P329	0.978	pirsf_Tyr_kinase_ephrin_rcpt	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_SAM/pointed,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA10	HGNC	ENSG00000183317	tier1	-	-	176	0	0.00	67	47	41.23
EPHA5	0	genome.wustl.edu	37	4	66535355	66535355	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	66535355	66535355	G	A	SNP	EPHA5	ENST00000273854	human	ensembl	74_37	-1	known	nonsense	c.106	p.R36*	0.363	pirsf_Tyr_kinase_ephrin_rcpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242	tier1	-	-	19	0	0.00	4	4	50.00
EPHB2	0	genome.wustl.edu	37	1	23239995	23239995	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	23239995	23239995	A	-	DEL	EPHB2	ENST00000400191	human	ensembl	74_37	+1	known	frame_shift_del	c.2893	p.I967fs	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHB2	HGNC	ENSG00000133216	tier1			96	0	0.00	40	30	42.86
EPN1	0	genome.wustl.edu	37	19	56203122	56203122	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	56203122	56203122	G	A	SNP	EPN1	ENST00000411543	human	ensembl	74_37	+1	known	silent	c.1023	p.S341	0.027	NULL	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN1	HGNC	ENSG00000063245	tier1	-	-	68	0	0.00	43	16	26.23
EPN1	0	genome.wustl.edu	37	19	56203184	56203184	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	56203184	56203184	G	-	DEL	EPN1	ENST00000411543	human	ensembl	74_37	+1	known	frame_shift_del	c.1085	p.G364fs	1.000	NULL	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN1	HGNC	ENSG00000063245	tier1			36	0	0.00	22	5	18.52
EPS15L1	0	genome.wustl.edu	37	19	16472690	16472690	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	16472690	16472690	T	-	DEL	EPS15L1	ENST00000455140	human	ensembl	74_37	-1	known	frame_shift_del	c.2486	p.K829fs	1.000	NULL	superfamily_Prefoldin,smart_EPS15_homology,smart_EF_hand_dom,smart_Ubiquitin-int_motif,pfscan_EF_hand_dom,pfscan_EPS15_homology,pfscan_Ubiquitin-int_motif	-	no_errors	EPS15L1	HGNC	ENSG00000127527	tier1			71	0	0.00	52	25	32.47
EPS8L1	0	genome.wustl.edu	37	19	55598783	55598783	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	55598783	55598783	G	A	SNP	EPS8L1	ENST00000201647	human	ensembl	74_37	+1	known	missense	c.2065	p.V689M	0.998	superfamily_SAM/pointed	pfam_PTB,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_PTB/PI_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	EPS8L1	HGNC	ENSG00000131037	tier1	-	-	32	0	0.00	12	7	36.84
EPS8L3	0	genome.wustl.edu	37	1	110300959	110300959	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	110300959	110300959	G	T	SNP	EPS8L3	ENST00000369805	human	ensembl	74_37	-1	known	silent	c.699	p.P233	0.000	NULL	pfam_PTB,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	EPS8L3	HGNC	ENSG00000198758				76	0	0.00	53	3	5.36
ERAL1	0	genome.wustl.edu	37	17	27185670	27185670	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	27185670	27185670	A	C	SNP	ERAL1	ENST00000254928	human	ensembl	74_37	+1	known	missense	c.788	p.K263T	0.939	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_GTP_binding_domain,pfam_MIRO-like,pfam_Dynamin_GTPase,pfam_AIG1,pfam_EF_GTP-bd_dom,pfam_Fe2_transport_prot_B_N,superfamily_P-loop_NTPase,superfamily_KH_prok-type,prints_GTP_binding_domain,tigrfam_Small_GTP-bd_dom	-	no_errors	ERAL1	HGNC	ENSG00000132591	tier1	-	-	38	0	0.00	17	18	51.43
ERBB2	0	genome.wustl.edu	37	17	37866417	37866417	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	37866417	37866417	C	T	SNP	ERBB2	ENST00000269571	human	ensembl	74_37	+1	known	missense	c.722	p.A241V	0.999	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Furin-like_Cys-rich_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB2	HGNC	ENSG00000141736	tier1	-	-	28	0	0.00	16	10	38.46
ERBB2	0	genome.wustl.edu	37	17	37881000	37881000	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	37881000	37881000	G	T	SNP	ERBB2	ENST00000269571	human	ensembl	74_37	+1	known	missense	c.2329	p.V777L	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB2	HGNC	ENSG00000141736	tier1	rs121913471	-	99	0	0.00	46	20	30.30
ERBB3	0	genome.wustl.edu	37	12	56495024	56495024	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	56495024	56495024	C	T	SNP	ERBB3	ENST00000267101	human	ensembl	74_37	+1	known	silent	c.3381	p.R1127	0.134	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Furin-like_Cys-rich_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB3	HGNC	ENSG00000065361	tier1	-	-	16	0	0.00	10	10	50.00
ERBB4	0	genome.wustl.edu	37	2	212989493	212989493	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	212989493	212989493	T	C	SNP	ERBB4	ENST00000342788	human	ensembl	74_37	-1	known	missense	c.218	p.D73G	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_EGF_rcpt_L	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB4	HGNC	ENSG00000178568	tier1	-	-	43	0	0.00	16	20	55.56
ERC2	0	genome.wustl.edu	37	3	55544295	55544298	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	55544295	55544298	AAAA	-	DEL	ERC2	ENST00000484530	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000:0.000	-	-	-	no_errors	ERC2	HGNC	ENSG00000187672	tier1			26	0	0.00	10	7	41.18
ERC2	0	genome.wustl.edu	37	3	56330173	56330173	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	56330173	56330173	G	T	SNP	ERC2	ENST00000288221	human	ensembl	74_37	-1	known	silent	c.948	p.G316	0.240	pfam_CAZ_cplx_RIM-bd_prot	pfam_CAZ_cplx_RIM-bd_prot,superfamily_Prefoldin	-	no_errors	ERC2	HGNC	ENSG00000187672	tier1	-	-	99	0	0.00	84	6	6.67
ERCC6	0	genome.wustl.edu	37	10	50684358	50684358	+	Splice_Site	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	50684358	50684358	T	C	SNP	ERCC6	ENST00000355832	human	ensembl	74_37	-1	known	splice_site	c.2287-2	e11-2	0.993	-	-	-	no_errors	ERCC6	HGNC	ENSG00000225830	tier1	-	-	34	0	0.00	19	18	47.37
ERCC8	0	genome.wustl.edu	37	5	60187968	60187968	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	60187968	60187968	T	-	DEL	ERCC8	ENST00000462279	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ERCC8	HGNC	ENSG00000049167	tier1			60	0	0.00	31	6	16.22
ERF	0	genome.wustl.edu	37	19	42753368	42753368	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	42753368	42753368	C	-	DEL	ERF	ENST00000222329	human	ensembl	74_37	-1	known	frame_shift_del	c.896	p.G299fs	0.941	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ERF	HGNC	ENSG00000105722	tier1			52	0	0.00	19	15	44.12
ERG	0	genome.wustl.edu	37	21	39947607	39947607	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	39947607	39947607	C	T	SNP	ERG	ENST00000398919	human	ensembl	74_37	-1	known	silent	c.18	p.P6	0.470	NULL	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ERG	HGNC	ENSG00000157554	tier1	-	-	43	0	0.00	31	12	27.91
ERO1LB	0	genome.wustl.edu	37	1	236415381	236415381	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	236415381	236415381	G	A	SNP	ERO1LB	ENST00000354619	human	ensembl	74_37	-1	known	missense	c.317	p.P106L	1.000	pfam_Ero1,pirsf_Ero1	pfam_Ero1,pirsf_Ero1	-	no_errors	ERO1LB	HGNC	ENSG00000086619	tier1	-	-	25	0	0.00	18	14	43.75
ERP29	0	genome.wustl.edu	37	12	112457621	112457623	+	In_Frame_Del	DEL	AGC	AGC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AGC	AGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	112457621	112457623	AGC	-	DEL	ERP29	ENST00000261735	human	ensembl	74_37	+1	known	in_frame_del	c.206_208	p.Q70in_frame_del	1.000:1.000:1.000	pfam_ERp29_N,superfamily_Thioredoxin-like_fold,pirsf_ER_p29	pfam_ERp29_N,pfam_ER_p29_C,superfamily_ER_p29_C,superfamily_Thioredoxin-like_fold,pirsf_ER_p29	-	no_errors	ERP29	HGNC	ENSG00000089248	tier1			64	0	0.00	36	29	44.62
ESRP1	0	genome.wustl.edu	37	8	95686611	95686611	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	95686611	95686611	A	-	DEL	ESRP1	ENST00000433389	human	ensembl	74_37	+1	known	frame_shift_del	c.1528	p.N512fs	1.000	smart_RRM_dom	superfamily_RNaseH-like_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ESRP1	HGNC	ENSG00000104413	tier1			98	0	0.00	80	21	20.79
ETAA1	0	genome.wustl.edu	37	2	67626314	67626314	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	67626314	67626314	A	G	SNP	ETAA1	ENST00000272342	human	ensembl	74_37	+1	known	silent	c.237	p.T79	0.896	NULL	NULL	-	no_errors	ETAA1	HGNC	ENSG00000143971	tier1	-	-	58	0	0.00	31	25	44.64
ETV3	0	genome.wustl.edu	37	1	157094756	157094756	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	157094756	157094756	G	-	DEL	ETV3	ENST00000368192	human	ensembl	74_37	-1	known	frame_shift_del	c.1416	p.K473fs	0.991	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ETV3	HGNC	ENSG00000117036	tier1			41	0	0.00	43	13	23.21
EVC2	0	genome.wustl.edu	37	4	5617231	5617231	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	5617231	5617231	C	T	SNP	EVC2	ENST00000344408	human	ensembl	74_37	-1	known	missense	c.2747	p.S916N	0.485	NULL	pfam_Limbin	-	no_errors	EVC2	HGNC	ENSG00000173040	tier1	-	-	77	0	0.00	64	25	28.09
EXOC4	0	genome.wustl.edu	37	7	133059721	133059721	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	133059721	133059721	G	T	SNP	EXOC4	ENST00000253861	human	ensembl	74_37	+1	known	missense	c.1147	p.A383S	1.000	NULL	pfam_Sec8_exocyst	-	no_errors	EXOC4	HGNC	ENSG00000131558	tier1	-	-	48	0	0.00	33	14	29.79
EXOSC10	0	genome.wustl.edu	37	1	11136981	11136981	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	11136981	11136981	G	A	SNP	EXOSC10	ENST00000376936	human	ensembl	74_37	-1	known	missense	c.1904	p.A635V	0.056	NULL	pfam_3'-5'_exonuclease_dom,pfam_Exosome-assoc_fac_Rrp6_N,pfam_HRDC_dom,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_HRDC_dom,pfscan_HRDC_dom	-	no_errors	EXOSC10	HGNC	ENSG00000171824	tier1	-	-	25	0	0.00	21	17	44.74
F2R	0	genome.wustl.edu	37	5	76028423	76028423	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	76028423	76028423	G	A	SNP	F2R	ENST00000319211	human	ensembl	74_37	+1	known	missense	c.373	p.V125I	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Thrmbn_rcpt,prints_GPCR_Rhodpsn,prints_Protea_act_rcpt	-	no_errors	F2R	HGNC	ENSG00000181104	tier1	-	-	94	0	0.00	59	42	41.58
F8	0	genome.wustl.edu	37	X	154194908	154194908	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	154194908	154194908	C	T	SNP	F8	ENST00000360256	human	ensembl	74_37	-1	known	missense	c.1064	p.R355Q	0.001	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010	tier1	rs146581224	-	35	0	0.00	7	27	79.41
FADS2	0	genome.wustl.edu	37	11	61615632	61615632	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	61615632	61615632	G	T	SNP	FADS2	ENST00000278840	human	ensembl	74_37	+1	known	missense	c.620	p.G207V	1.000	pfam_Fatty_acid_desaturase-1,pirsf_Fatty_acid/sphinglp_desaturase	pfam_Fatty_acid_desaturase-1,pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pirsf_Fatty_acid/sphinglp_desaturase,pfscan_Cyt_B5-like_heme/steroid-bd	-	no_errors	FADS2	HGNC	ENSG00000134824	tier1	-	-	69	0	0.00	37	4	9.76
FAHD2A	0	genome.wustl.edu	37	2	96078465	96078466	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	96078465	96078466	-	C	INS	FAHD2A	ENST00000233379	human	ensembl	74_37	+1	known	frame_shift_ins	c.835_836	p.G282fs	1.000:0.997	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel	-	no_errors	FAHD2A	HGNC	ENSG00000115042	tier1			67	0	0.00	36	18	33.33
FAHD2B	0	genome.wustl.edu	37	2	97749725	97749725	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	97749725	97749725	G	-	DEL	FAHD2B	ENST00000272610	human	ensembl	74_37	-1	known	frame_shift_del	c.842	p.P281fs	1.000	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel	-	no_errors	FAHD2B	HGNC	ENSG00000144199	tier1			80	0	0.00	58	24	29.27
FAHD2B	0	genome.wustl.edu	37	2	97756048	97756048	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	97756048	97756048	T	C	SNP	FAHD2B	ENST00000272610	human	ensembl	74_37	-1	known	missense	c.260	p.Q87R	0.189	NULL	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel	-	no_errors	FAHD2B	HGNC	ENSG00000144199	tier1	-	-	123	0	0.00	58	34	36.96
FAHD2B	0	genome.wustl.edu	37	2	97757244	97757244	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	97757244	97757244	G	A	SNP	FAHD2B	ENST00000272610	human	ensembl	74_37	-1	known	missense	c.200	p.T67M	0.991	NULL	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel	-	no_errors	FAHD2B	HGNC	ENSG00000144199	tier1	-	-	102	0	0.00	49	36	42.35
FAM104B	0	genome.wustl.edu	37	X	55172586	55172586	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	55172586	55172586	G	A	SNP	FAM104B	ENST00000425133	human	ensembl	74_37	-1	known	silent	c.282	p.S94	0.008	NULL	NULL	-	no_errors	FAM104B	HGNC	ENSG00000182518				28	0	0.00	50	4	7.41
FAM111B	0	genome.wustl.edu	37	11	58892343	58892343	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	58892343	58892343	A	G	SNP	FAM111B	ENST00000343597	human	ensembl	74_37	+1	known	missense	c.773	p.E258G	0.001	NULL	superfamily_Trypsin-like_Pept_dom	-	no_errors	FAM111B	HGNC	ENSG00000189057	tier1	-	-	25	0	0.00	15	8	34.78
FAM111B	0	genome.wustl.edu	37	11	58893105	58893105	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	58893105	58893105	G	T	SNP	FAM111B	ENST00000343597	human	ensembl	74_37	+1	known	missense	c.1535	p.C512F	0.001	superfamily_Trypsin-like_Pept_dom	superfamily_Trypsin-like_Pept_dom	-	no_errors	FAM111B	HGNC	ENSG00000189057				35	0	0.00	39	3	7.14
FAM117A	0	genome.wustl.edu	37	17	47795063	47795063	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	47795063	47795063	G	T	SNP	FAM117A	ENST00000240364	human	ensembl	74_37	-1	known	missense	c.722	p.P241H	0.985	NULL	NULL	-	no_errors	FAM117A	HGNC	ENSG00000121104	tier1	-	-	72	0	0.00	48	5	9.43
FAM120A	0	genome.wustl.edu	37	9	96259883	96259884	+	Splice_Site	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	96259883	96259884	-	A	INS	FAM120A	ENST00000333936	human	ensembl	74_37	+1	known	splice_site_ins	c.933+2_933+1	e4+2	1.000:0.997	-	-	-	no_errors	FAM120A	HGNC	ENSG00000048828	tier1			37	0	0.00	52	11	17.46
FAM124A	0	genome.wustl.edu	37	13	51825749	51825749	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	51825749	51825749	C	T	SNP	FAM124A	ENST00000280057	human	ensembl	74_37	+1	known	silent	c.354	p.S118	0.001	NULL	NULL	-	no_errors	FAM124A	HGNC	ENSG00000150510	tier1	-	-	21	0	0.00	18	8	30.77
FAM131A	0	genome.wustl.edu	37	3	184062461	184062461	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	184062461	184062461	G	A	SNP	FAM131A	ENST00000383847	human	ensembl	74_37	+1	known	silent	c.804	p.P268	0.001	NULL	NULL	-	no_errors	FAM131A	HGNC	ENSG00000175182	tier1	-	-	113	0	0.00	66	34	34.00
FAM131C	0	genome.wustl.edu	37	1	16385004	16385004	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	16385004	16385004	G	A	SNP	FAM131C	ENST00000375662	human	ensembl	74_37	-1	known	silent	c.771	p.T257	0.004	NULL	superfamily_Chromodomain-like	-	no_errors	FAM131C	HGNC	ENSG00000185519				63	0	0.00	58	6	9.38
FAM133A	0	genome.wustl.edu	37	X	92964950	92964950	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	92964950	92964950	A	-	DEL	FAM133A	ENST00000322139	human	ensembl	74_37	+1	known	frame_shift_del	c.532	p.R180fs	0.996	NULL	NULL	-	no_errors	FAM133A	HGNC	ENSG00000179083	tier1			13	0	0.00	3	6	66.67
FAM135B	0	genome.wustl.edu	37	8	139144926	139144926	+	Silent	SNP	C	C	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	139144926	139144926	C	G	SNP	FAM135B	ENST00000395297	human	ensembl	74_37	-1	known	silent	c.4131	p.L1377	1.000	NULL	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like	-	no_errors	FAM135B	HGNC	ENSG00000147724	tier1	-	-	43	0	0.00	37	25	40.32
FAM135B	0	genome.wustl.edu	37	8	139151309	139151309	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	139151309	139151309	G	T	SNP	FAM135B	ENST00000395297	human	ensembl	74_37	-1	known	missense	c.3821	p.S1274Y	1.000	pfam_DUF676_lipase-like	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like	-	no_errors	FAM135B	HGNC	ENSG00000147724	tier1	-	-	60	0	0.00	49	17	25.76
FAM135B	0	genome.wustl.edu	37	8	139163952	139163952	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	139163952	139163952	G	T	SNP	FAM135B	ENST00000395297	human	ensembl	74_37	-1	known	silent	c.2766	p.G922	0.000	NULL	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like	-	no_errors	FAM135B	HGNC	ENSG00000147724				35	0	0.00	41	3	6.82
FAM13A	0	genome.wustl.edu	37	4	89708944	89708946	+	In_Frame_Del	DEL	GGC	GGC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GGC	GGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	89708944	89708946	GGC	-	DEL	FAM13A	ENST00000264344	human	ensembl	74_37	-1	known	in_frame_del	c.1231_1229	p.R410in_frame_del	0.947:0.929:0.952	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	FAM13A	HGNC	ENSG00000138640	tier1			45	0	0.00	29	18	38.30
FAM151A	0	genome.wustl.edu	37	1	55081757	55081757	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	55081757	55081757	G	-	DEL	FAM151A	ENST00000302250	human	ensembl	74_37	-1	known	frame_shift_del	c.351	p.T118fs	0.037	pfam_DUF2181	pfam_DUF2181	-	no_errors	FAM151A	HGNC	ENSG00000162391	tier1			43	0	0.00	29	15	34.09
FAM155B	0	genome.wustl.edu	37	X	68725612	68725613	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	68725612	68725613	-	C	INS	FAM155B	ENST00000252338	human	ensembl	74_37	+1	known	frame_shift_ins	c.487_488	p.L166fs	0.069:0.029	NULL	NULL	-	no_errors	FAM155B	HGNC	ENSG00000130054	tier1			25	0	0.00	9	13	59.09
FAM155B	0	genome.wustl.edu	37	X	68725612	68725613	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	68725612	68725613	-	CC	INS	FAM155B	ENST00000252338	human	ensembl	74_37	+1	known	frame_shift_ins	c.487_488	p.L167fs	0.069:0.029	NULL	NULL	-	no_errors	FAM155B	HGNC	ENSG00000130054	tier1			25	0	0.00	19	3	13.64
FAM155B	0	genome.wustl.edu	37	X	68725688	68725688	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	68725688	68725688	A	G	SNP	FAM155B	ENST00000252338	human	ensembl	74_37	+1	known	missense	c.563	p.K188R	1.000	NULL	NULL	-	no_errors	FAM155B	HGNC	ENSG00000130054	tier1	-	-	21	0	0.00	1	13	92.86
FAM163A	0	genome.wustl.edu	37	1	179783147	179783147	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	179783147	179783147	G	A	SNP	FAM163A	ENST00000341785	human	ensembl	74_37	+1	known	silent	c.327	p.T109	0.977	NULL	NULL	-	no_errors	FAM163A	HGNC	ENSG00000143340	tier1	-	-	62	0	0.00	44	25	36.23
FAM166A	0	genome.wustl.edu	37	9	140140255	140140255	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	140140255	140140255	C	T	SNP	FAM166A	ENST00000344774	human	ensembl	74_37	-1	known	missense	c.107	p.G36E	1.000	pfam_UPF0573/UPF0605	pfam_UPF0573/UPF0605	-	no_errors	FAM166A	HGNC	ENSG00000188163	tier1	-	-	30	0	0.00	17	4	19.05
FAM171A1	0	genome.wustl.edu	37	10	15256454	15256454	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	15256454	15256454	G	T	SNP	FAM171A1	ENST00000378116	human	ensembl	74_37	-1	known	missense	c.1133	p.S378Y	0.319	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171	-	no_errors	FAM171A1	HGNC	ENSG00000148468	tier1	-	-	46	0	0.00	50	4	7.41
FAM174A	0	genome.wustl.edu	37	5	99871109	99871109	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	99871109	99871109	C	A	SNP	FAM174A	ENST00000509040	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.036	-	-	-	no_errors	FAM174A	HGNC	ENSG00000174132	tier1	-	-	69	0	0.00	37	32	46.38
FAM179B	0	genome.wustl.edu	37	14	45433438	45433438	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	45433438	45433438	C	T	SNP	FAM179B	ENST00000361577	human	ensembl	74_37	+1	known	missense	c.1814	p.A605V	0.895	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FAM179B	HGNC	ENSG00000198718	tier1	-	-	62	0	0.00	33	19	36.54
FAM184A	0	genome.wustl.edu	37	6	119338013	119338013	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	119338013	119338013	C	T	SNP	FAM184A	ENST00000338891	human	ensembl	74_37	-1	known	missense	c.1429	p.E477K	1.000	NULL	superfamily_Prefoldin	-	no_errors	FAM184A	HGNC	ENSG00000111879	tier1	-	-	62	0	0.00	50	32	39.02
FAM184B	0	genome.wustl.edu	37	4	17634191	17634191	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	17634191	17634191	C	T	SNP	FAM184B	ENST00000265018	human	ensembl	74_37	-1	known	silent	c.3147	p.P1049	0.000	NULL	NULL	-	no_errors	FAM184B	HGNC	ENSG00000047662	tier1	-	-	137	0	0.00	98	65	39.88
FAM184B	0	genome.wustl.edu	37	4	17634192	17634192	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	17634192	17634192	G	A	SNP	FAM184B	ENST00000265018	human	ensembl	74_37	-1	known	missense	c.3146	p.P1049L	0.000	NULL	NULL	-	no_errors	FAM184B	HGNC	ENSG00000047662	tier1	-	-	137	0	0.00	112	50	30.49
FAM184B	0	genome.wustl.edu	37	4	17711179	17711179	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	17711179	17711179	G	A	SNP	FAM184B	ENST00000265018	human	ensembl	74_37	-1	known	missense	c.230	p.A77V	0.018	NULL	NULL	-	no_errors	FAM184B	HGNC	ENSG00000047662	tier1	-	-	58	0	0.00	33	13	28.26
FAM204A	0	genome.wustl.edu	37	10	120095902	120095902	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	120095902	120095902	C	T	SNP	FAM204A	ENST00000369172	human	ensembl	74_37	-1	known	missense	c.26	p.G9D	1.000	NULL	NULL	-	no_errors	FAM204A	HGNC	ENSG00000165669	tier1	-	-	76	0	0.00	30	23	43.40
FAM205B	0	genome.wustl.edu	37	9	34834815	34834815	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	34834815	34834815	G	T	SNP	FAM205B	ENST00000455647	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM205B	HGNC	ENSG00000257198	tier1	-	-	38	0	0.00	54	4	6.90
FAM206A	0	genome.wustl.edu	37	9	111698011	111698011	+	RNA	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	111698011	111698011	T	C	SNP	FAM206A	ENST00000466200	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	FAM206A	HGNC	ENSG00000119328	tier1	-	-	17	0	0.00	15	7	31.82
FAM214B	0	genome.wustl.edu	37	9	35106613	35106613	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	35106613	35106613	C	T	SNP	FAM214B	ENST00000322813	human	ensembl	74_37	-1	known	silent	c.981	p.G327	0.463	NULL	NULL	-	no_errors	FAM214B	HGNC	ENSG00000005238	tier1	-	-	29	0	0.00	12	9	42.86
FAM227A	0	genome.wustl.edu	37	22	39024946	39024946	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	39024946	39024946	A	-	DEL	FAM227A	ENST00000543295	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM227A	HGNC	ENSG00000184949	tier1			37	0	0.00	13	7	35.00
FAM228B	0	genome.wustl.edu	37	2	24392365	24392365	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	24392365	24392365	A	-	DEL	FAM228B	ENST00000468799	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM228B	HGNC	ENSG00000219626	tier1			15	0	0.00	4	5	55.56
FAM230A	0	genome.wustl.edu	37	22	20708955	20708955	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	20708955	20708955	C	T	SNP	FAM230A	ENST00000434783	human	ensembl	74_37	+1	known	silent	c.687	p.V229	0.052	superfamily_Kinase-like_dom	pfam_Ret-finger_pr-like_3_antisense,superfamily_Kinase-like_dom	-	no_errors	FAM230A	HGNC	ENSG00000188280	tier1	-	-	62	0	0.00	25	28	52.83
FAM230A	0	genome.wustl.edu	37	22	20710199	20710199	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	20710199	20710199	C	T	SNP	FAM230A	ENST00000434783	human	ensembl	74_37	+1	known	missense	c.1931	p.A644V	0.004	superfamily_Kinase-like_dom	pfam_Ret-finger_pr-like_3_antisense,superfamily_Kinase-like_dom	-	no_errors	FAM230A	HGNC	ENSG00000188280	tier1	-	-	77	0	0.00	53	28	34.57
FAM230A	0	genome.wustl.edu	37	22	20710754	20710754	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	20710754	20710754	C	T	SNP	FAM230A	ENST00000434783	human	ensembl	74_37	+1	known	missense	c.2486	p.T829M	0.000	NULL	pfam_Ret-finger_pr-like_3_antisense,superfamily_Kinase-like_dom	-	no_errors	FAM230A	HGNC	ENSG00000188280	tier1	-	-	262	0	0.00	168	33	16.42
FAM230B	0	genome.wustl.edu	37	22	21539696	21539696	+	RNA	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	21539696	21539696	T	C	SNP	FAM230B	ENST00000451257	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.566	-	-	-	no_errors	FAM230B	HGNC	ENSG00000215498	tier1	-	-	74	0	0.00	50	11	18.03
FAM25C	0	genome.wustl.edu	37	10	49207770	49207770	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	49207770	49207770	G	A	SNP	FAM25C	ENST00000342763	human	ensembl	74_37	-1	known	silent	c.30	p.A10	0.005	prints_FAM25	prints_FAM25	-	no_errors	FAM25C	HGNC	ENSG00000188279	tier1	-	-	184	0	0.00	135	29	17.68
FAM26E	0	genome.wustl.edu	37	6	116836792	116836792	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	116836792	116836792	G	A	SNP	FAM26E	ENST00000368599	human	ensembl	74_37	+1	known	silent	c.570	p.A190	0.236	NULL	NULL	-	no_errors	FAM26E	HGNC	ENSG00000178033	tier1	-	-	61	0	0.00	64	25	28.09
FAM71A	0	genome.wustl.edu	37	1	212798457	212798457	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	212798457	212798457	C	A	SNP	FAM71A	ENST00000294829	human	ensembl	74_37	+1	known	missense	c.238	p.L80I	0.453	NULL	pfam_DUF3699	-	no_errors	FAM71A	HGNC	ENSG00000162771	tier1	-	-	83	0	0.00	73	29	28.43
FAM71E2	0	genome.wustl.edu	37	19	55869962	55869962	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	55869962	55869962	C	A	SNP	FAM71E2	ENST00000424985	human	ensembl	74_37	-1	novel	missense	c.2274	p.Q758H	0.000	NULL	pfam_DUF3699	-	no_errors	FAM71E2	HGNC	ENSG00000180043	tier1	-	-	83	0	0.00	43	32	42.67
FAM83C	0	genome.wustl.edu	37	20	33875260	33875260	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	33875260	33875260	A	C	SNP	FAM83C	ENST00000374408	human	ensembl	74_37	-1	known	missense	c.1322	p.V441G	0.067	NULL	pfam_DUF1669	-	no_errors	FAM83C	HGNC	ENSG00000125998	tier1	-	-	59	0	0.00	36	23	38.98
FAM83E	0	genome.wustl.edu	37	19	49113185	49113185	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	49113185	49113185	G	A	SNP	FAM83E	ENST00000263266	human	ensembl	74_37	-1	known	missense	c.706	p.R236W	0.882	pfam_DUF1669	pfam_DUF1669,superfamily_Acyl_CoA_acyltransferase	-	no_errors	FAM83E	HGNC	ENSG00000105523	tier1	-	-	77	0	0.00	38	20	34.48
FAM83G	0	genome.wustl.edu	37	17	18891589	18891589	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	18891589	18891589	G	A	SNP	FAM83G	ENST00000345041	human	ensembl	74_37	-1	known	missense	c.661	p.R221W	1.000	pfam_DUF1669	pfam_DUF1669	-	no_errors	FAM83G	HGNC	ENSG00000188522	tier1	-	-	53	0	0.00	30	14	31.82
FAM84B	0	genome.wustl.edu	37	8	127568850	127568850	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	127568850	127568850	C	T	SNP	FAM84B	ENST00000304916	human	ensembl	74_37	-1	known	missense	c.785	p.R262H	0.994	NULL	pfam_LRAT-like_dom	-	no_errors	FAM84B	HGNC	ENSG00000168672	tier1	-	-	93	0	0.00	67	17	20.24
FAM86B3P	0	genome.wustl.edu	37	8	8098200	8098200	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	8098200	8098200	A	G	SNP	FAM86B3P	ENST00000310542	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	FAM86B3P	HGNC	ENSG00000173295	tier1	-	-	75	0	0.00	94	19	16.81
FAM87A	0	genome.wustl.edu	37	8	327602	327602	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	327602	327602	C	T	SNP	FAM87A	ENST00000330148	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	FAM87A	HGNC	ENSG00000182366				13	0	0.00	17	8	32.00
FAM98A	0	genome.wustl.edu	37	2	33810498	33810498	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	33810498	33810498	C	A	SNP	FAM98A	ENST00000238823	human	ensembl	74_37	-1	known	missense	c.902	p.R301M	1.000	pfam_Uncharacterised_FAM98	pfam_Uncharacterised_FAM98	-	no_errors	FAM98A	HGNC	ENSG00000119812	tier1	-	-	25	0	0.00	12	7	36.84
FANCE	0	genome.wustl.edu	37	6	35425714	35425715	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	35425714	35425715	-	C	INS	FANCE	ENST00000229769	human	ensembl	74_37	+1	known	frame_shift_ins	c.922_923	p.V311fs	0.000:0.000	pfam_Fanconi_anaemia_gr_E_prot_C	pfam_Fanconi_anaemia_gr_E_prot_C	-	no_errors	FANCE	HGNC	ENSG00000112039	tier1			47	0	0.00	41	14	25.45
FANCF	0	genome.wustl.edu	37	11	22646528	22646528	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	22646528	22646528	G	A	SNP	FANCF	ENST00000327470	human	ensembl	74_37	-1	known	silent	c.829	p.L277	0.592	NULL	NULL	-	no_errors	FANCF	HGNC	ENSG00000183161	tier1	-	-	27	0	0.00	20	14	41.18
FANCM	0	genome.wustl.edu	37	14	45645955	45645955	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	45645955	45645955	A	-	DEL	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	frame_shift_del	c.3998	p.V1336fs	0.008	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790	tier1			34	0	0.00	31	14	31.11
FARP1	0	genome.wustl.edu	37	13	99047581	99047581	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	99047581	99047581	C	T	SNP	FARP1	ENST00000376586	human	ensembl	74_37	+1	known	missense	c.1265	p.P422L	0.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM-adjacent,pfam_FERM_central,superfamily_DH-domain,superfamily_FERM_central,smart_Band_41_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_FERM_domain,pfscan_Pleckstrin_homology,pfscan_DH-domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FARP1	HGNC	ENSG00000152767	tier1	-	-	35	0	0.00	19	23	54.76
FASN	0	genome.wustl.edu	37	17	80041180	80041180	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	80041180	80041180	C	A	SNP	FASN	ENST00000306749	human	ensembl	74_37	-1	known	silent	c.5463	p.G1821	0.002	smart_PKS_ER	pfam_Acyl_transferase,pfam_Ketoacyl_synth_N,pfam_Thioesterase,pfam_PKS_KR,pfam_DH_sc/Rdtase_SDR,pfam_Ketoacyl_synth_C,pfam_ADH_C,pfam_Acyl_carrier_prot-like,pfam_Methyltransf_12,pfam_Methyltransf_11,superfamily_Thiolase-like,superfamily_Acyl_Trfase/lysoPLipase,superfamily_GroES-like,superfamily_Acyl_carrier_prot-like,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_Beta-ketoAc_synthase_dom,smart_PKS_acyl_transferase,smart_PKS_dehydratase,smart_PKS_ER,smart_PKS/FAS_KR,smart_PKS_PP-bd,pfscan_Acyl_carrier_prot-like	-	no_errors	FASN	HGNC	ENSG00000169710	tier1	-	-	117	0	0.00	42	27	39.13
FASN	0	genome.wustl.edu	37	17	80047566	80047566	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	80047566	80047566	G	-	DEL	FASN	ENST00000306749	human	ensembl	74_37	-1	known	frame_shift_del	c.1907	p.P636fs	0.705	pfam_Acyl_transferase,superfamily_Acyl_Trfase/lysoPLipase,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_acyl_transferase	pfam_Acyl_transferase,pfam_Ketoacyl_synth_N,pfam_Thioesterase,pfam_PKS_KR,pfam_DH_sc/Rdtase_SDR,pfam_Ketoacyl_synth_C,pfam_ADH_C,pfam_Acyl_carrier_prot-like,pfam_Methyltransf_12,pfam_Methyltransf_11,superfamily_Thiolase-like,superfamily_Acyl_Trfase/lysoPLipase,superfamily_GroES-like,superfamily_Acyl_carrier_prot-like,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_Beta-ketoAc_synthase_dom,smart_PKS_acyl_transferase,smart_PKS_dehydratase,smart_PKS_ER,smart_PKS/FAS_KR,smart_PKS_PP-bd,pfscan_Acyl_carrier_prot-like	-	no_errors	FASN	HGNC	ENSG00000169710	tier1			89	0	0.00	40	30	42.86
FASTKD5	0	genome.wustl.edu	37	20	3128000	3128001	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	3128000	3128001	-	C	INS	FASTKD5	ENST00000380266	human	ensembl	74_37	-1	known	frame_shift_ins	c.1717_1716	p.P572fs	1.000:0.997	pfam_FAST_2	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTKD5	HGNC	ENSG00000215251	tier1			17	0	0.00	15	8	34.78
FAT3	0	genome.wustl.edu	37	11	92085985	92085985	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	92085985	92085985	G	T	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.707	p.R236L	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	66	0	0.00	57	4	6.56
FAT3	0	genome.wustl.edu	37	11	92534013	92534013	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	92534013	92534013	G	T	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.7834	p.D2612Y	0.998	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	56	0	0.00	26	26	50.00
FAT3	0	genome.wustl.edu	37	11	92534496	92534496	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	92534496	92534496	C	T	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.8317	p.R2773C	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	52	0	0.00	33	17	34.00
FAT3	0	genome.wustl.edu	37	11	92577336	92577336	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	92577336	92577336	C	T	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	silent	c.10803	p.H3601	0.067	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	94	0	0.00	31	28	46.67
FAT3	0	genome.wustl.edu	37	11	92600024	92600024	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	92600024	92600024	C	T	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.11776	p.R3926C	0.994	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	75	0	0.00	39	30	43.48
FAT4	0	genome.wustl.edu	37	4	126408620	126408620	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	126408620	126408620	G	T	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	nonsense	c.12937	p.G4313*	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				43	0	0.00	38	2	5.00
FBN2	0	genome.wustl.edu	37	5	127607801	127607801	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	127607801	127607801	T	C	SNP	FBN2	ENST00000262464	human	ensembl	74_37	-1	known	missense	c.7850	p.E2617G	1.000	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829	tier1	-	-	48	0	0.00	22	28	56.00
FBN2	0	genome.wustl.edu	37	5	127638705	127638705	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	127638705	127638705	G	A	SNP	FBN2	ENST00000262464	human	ensembl	74_37	-1	known	silent	c.5877	p.C1959	1.000	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829	tier1	-	-	44	0	0.00	24	30	55.56
FBN2	0	genome.wustl.edu	37	5	127873215	127873215	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	127873215	127873215	C	T	SNP	FBN2	ENST00000262464	human	ensembl	74_37	-1	known	missense	c.82	p.G28S	0.089	pirsf_FBN	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829	tier1	-	-	24	0	0.00	10	11	52.38
FBN3	0	genome.wustl.edu	37	19	8153004	8153004	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	8153004	8153004	C	T	SNP	FBN3	ENST00000270509	human	ensembl	74_37	-1	known	missense	c.6436	p.G2146R	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_FBN,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449	tier1	-	-	68	0	0.00	35	19	35.19
FBRS	0	genome.wustl.edu	37	16	30675549	30675549	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	30675549	30675549	C	-	DEL	FBRS	ENST00000356166	human	ensembl	74_37	+1	known	frame_shift_del	c.1069	p.K359fs	1.000	NULL	prints_AUTS2	-	no_errors	FBRS	HGNC	ENSG00000156860	tier1			53	0	0.00	28	8	22.22
FBRS	0	genome.wustl.edu	37	16	30680769	30680769	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	30680769	30680769	T	C	SNP	FBRS	ENST00000356166	human	ensembl	74_37	+1	known	missense	c.2746	p.Y916H	0.994	NULL	prints_AUTS2	-	no_errors	FBRS	HGNC	ENSG00000156860	tier1	-	-	47	0	0.00	31	14	31.11
FBXO18	0	genome.wustl.edu	37	10	5957464	5957464	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	5957464	5957464	G	T	SNP	FBXO18	ENST00000379999	human	ensembl	74_37	+1	known	nonsense	c.1648	p.E550*	0.004	superfamily_P-loop_NTPase	pfam_UvrD-like_ATP-bd,pfam_F-box_dom,superfamily_P-loop_NTPase,superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO18	HGNC	ENSG00000134452				53	0	0.00	56	3	5.08
FBXO25	0	genome.wustl.edu	37	8	382898	382898	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	382898	382898	A	-	DEL	FBXO25	ENST00000276326	human	ensembl	74_37	+1	known	frame_shift_del	c.251	p.K85fs	1.000	NULL	superfamily_F-box_dom	-	no_errors	FBXO25	HGNC	ENSG00000147364	tier1			122	0	0.00	154	40	20.62
FBXO43	0	genome.wustl.edu	37	8	101153207	101153207	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	101153207	101153207	A	G	SNP	FBXO43	ENST00000428847	human	ensembl	74_37	-1	known	silent	c.1275	p.D425	0.000	NULL	pfam_Znf_C6HC,superfamily_F-box_dom,smart_Znf_C6HC	-	no_errors	FBXO43	HGNC	ENSG00000156509	tier1	-	-	49	0	0.00	44	23	34.33
FBXO46	0	genome.wustl.edu	37	19	46215043	46215043	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	46215043	46215043	G	A	SNP	FBXO46	ENST00000317683	human	ensembl	74_37	-1	known	missense	c.1711	p.R571C	0.016	superfamily_F-box_dom	superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO46	HGNC	ENSG00000177051	tier1	-	-	93	0	0.00	35	31	46.97
FBXO46	0	genome.wustl.edu	37	19	46215926	46215926	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	46215926	46215926	G	A	SNP	FBXO46	ENST00000317683	human	ensembl	74_37	-1	known	silent	c.828	p.S276	0.988	NULL	superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO46	HGNC	ENSG00000177051				11	0	0.00	2	4	66.67
FBXO6	0	genome.wustl.edu	37	1	11733420	11733420	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	11733420	11733420	A	G	SNP	FBXO6	ENST00000376753	human	ensembl	74_37	+1	known	missense	c.596	p.E199G	0.994	pfam_F-box-assoc_dom,superfamily_Galactose-bd-like,pfscan_F-box-assoc_dom	pfam_F-box-assoc_dom,pfam_F-box_dom,superfamily_Galactose-bd-like,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom,pfscan_F-box-assoc_dom	-	no_errors	FBXO6	HGNC	ENSG00000116663	tier1	-	-	57	0	0.00	24	11	30.56
FBXW10	0	genome.wustl.edu	37	17	18681823	18681823	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	18681823	18681823	T	A	SNP	FBXW10	ENST00000308799	human	ensembl	74_37	+1	known	missense	c.2398	p.L800M	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW10	HGNC	ENSG00000171931	tier1	-	-	93	0	0.00	64	39	37.86
FBXW5	0	genome.wustl.edu	37	9	139836708	139836708	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	139836708	139836708	C	T	SNP	FBXW5	ENST00000325285	human	ensembl	74_37	-1	known	missense	c.886	p.A296T	0.000	superfamily_Quinoprot_gluc/sorb_DH	pfam_WD40_repeat,pfam_F-box_dom,superfamily_Quinoprot_gluc/sorb_DH,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	FBXW5	HGNC	ENSG00000159069	tier1	-	-	66	0	0.00	28	23	45.10
FBXW7	0	genome.wustl.edu	37	4	153247289	153247289	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	153247289	153247289	G	A	SNP	FBXW7	ENST00000281708	human	ensembl	74_37	-1	known	missense	c.1513	p.R505C	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW7	HGNC	ENSG00000109670	tier1	rs149680468	-	46	0	0.00	21	13	38.24
FCGBP	0	genome.wustl.edu	37	19	40395898	40395898	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	40395898	40395898	G	A	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	missense	c.7499	p.A2500V	0.288	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920	tier1	-	-	183	0	0.00	95	28	22.76
FCGBP	0	genome.wustl.edu	37	19	40421199	40421199	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	40421199	40421199	C	T	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	missense	c.2722	p.E908K	1.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920	tier1	-	-	65	0	0.00	24	19	44.19
FCGR3B	0	genome.wustl.edu	37	1	161594337	161594337	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	161594337	161594337	C	T	SNP	FCGR3B	ENST00000294800	human	ensembl	74_37	-1	known	missense	c.670	p.G224R	0.174	NULL	smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	FCGR3B	HGNC	ENSG00000162747	tier1	-	-	151	0	0.00	156	28	15.22
FCRL3	0	genome.wustl.edu	37	1	157660325	157660325	+	Splice_Site	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	157660325	157660325	T	C	SNP	FCRL3	ENST00000492769	human	ensembl	74_37	-1	known	splice_site	c.1430-2	e8-2	0.871	-	-	-	no_errors	FCRL3	HGNC	ENSG00000160856	tier1	-	-	29	0	0.00	13	8	38.10
FEM1A	0	genome.wustl.edu	37	19	4792859	4792859	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	4792859	4792859	G	-	DEL	FEM1A	ENST00000269856	human	ensembl	74_37	+1	known	frame_shift_del	c.993	p.G333fs	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	FEM1A	HGNC	ENSG00000141965	tier1			132	0	0.00	54	27	33.33
FER1L6	0	genome.wustl.edu	37	8	125131921	125131921	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	125131921	125131921	A	-	DEL	FER1L6	ENST00000399018	human	ensembl	74_37	+1	known	frame_shift_del	c.5464	p.K1823fs	1.000	superfamily_ABC1_TM_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,superfamily_ABC1_TM_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	FER1L6	HGNC	ENSG00000214814	tier1			71	0	0.00	77	18	18.95
FER1L6-AS1	0	genome.wustl.edu	37	8	125026586	125026587	+	RNA	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	125026586	125026587	-	C	INS	FER1L6-AS1	ENST00000518567	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.286:0.299	-	-	-	no_errors	FER1L6-AS1	HGNC	ENSG00000181171	tier1			52	0	0.00	51	17	25.00
FERMT2	0	genome.wustl.edu	37	14	53360081	53360082	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	53360081	53360082	-	T	INS	FERMT2	ENST00000343279	human	ensembl	74_37	-1	known	frame_shift_ins	c.456_455	p.K153fs	1.000:1.000	pfam_FERM_N,smart_Band_41_domain	pfam_FERM_central,pfam_Pleckstrin_homology,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	FERMT2	HGNC	ENSG00000073712	tier1			34	0	0.00	22	8	26.67
FGF10	0	genome.wustl.edu	37	5	44310592	44310592	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	44310592	44310592	G	A	SNP	FGF10	ENST00000264664	human	ensembl	74_37	-1	known	silent	c.366	p.A122	0.588	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF10	HGNC	ENSG00000070193	tier1	rs200392834	-	88	0	0.00	133	39	22.67
FGF3	0	genome.wustl.edu	37	11	69631126	69631126	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	69631126	69631126	A	G	SNP	FGF3	ENST00000334134	human	ensembl	74_37	-1	known	missense	c.286	p.Y96H	1.000	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF3	HGNC	ENSG00000186895	tier1	-	-	77	0	0.00	34	27	44.26
FGFBP1	0	genome.wustl.edu	37	4	15938178	15938178	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	15938178	15938178	T	-	DEL	FGFBP1	ENST00000259988	human	ensembl	74_37	-1	known	frame_shift_del	c.78	p.V27fs	0.001	pfam_FGF1-bd	pfam_FGF1-bd	-	no_errors	FGFBP1	HGNC	ENSG00000137440	tier1			77	0	0.00	54	18	25.00
FGFR1OP	0	genome.wustl.edu	37	6	167438458	167438458	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	167438458	167438458	T	-	DEL	FGFR1OP	ENST00000496181	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.043	-	-	-	no_errors	FGFR1OP	HGNC	ENSG00000213066	tier1			16	0	0.00	17	11	39.29
FGFRL1	0	genome.wustl.edu	37	4	1018800	1018800	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	1018800	1018800	C	A	SNP	FGFRL1	ENST00000264748	human	ensembl	74_37	+1	known	missense	c.1180	p.L394M	0.699	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FGFRL1	HGNC	ENSG00000127418	tier1	-	-	51	0	0.00	22	10	31.25
FHOD3	0	genome.wustl.edu	37	18	34205516	34205516	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	34205516	34205516	C	-	DEL	FHOD3	ENST00000257209	human	ensembl	74_37	+1	known	frame_shift_del	c.1000	p.S336fs	0.999	superfamily_ARM-type_fold	pfam_FH2_Formin,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FHOD3	HGNC	ENSG00000134775	tier1			81	0	0.00	42	25	37.31
FIGF	0	genome.wustl.edu	37	X	15364159	15364159	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	15364159	15364159	T	-	DEL	FIGF	ENST00000488351	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FIGF	HGNC	ENSG00000165197	tier1			17	0	0.00	5	13	72.22
FIGLA	0	genome.wustl.edu	37	2	71017547	71017547	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	71017547	71017547	C	T	SNP	FIGLA	ENST00000332372	human	ensembl	74_37	-1	known	missense	c.224	p.R75H	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	FIGLA	HGNC	ENSG00000183733	tier1	-	-	12	0	0.00	5	6	54.55
FLG	0	genome.wustl.edu	37	1	152277634	152277634	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	152277634	152277634	A	G	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.9728	p.V3243A	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	rs3126068	-	164	0	0.00	166	53	24.20
FLG	0	genome.wustl.edu	37	1	152283692	152283692	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	152283692	152283692	T	C	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.3670	p.K1224E	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	210	0	0.00	223	66	22.84
FLG	0	genome.wustl.edu	37	1	152283696	152283696	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	152283696	152283696	C	G	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.3666	p.K1222N	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	213	0	0.00	231	71	23.51
FLII	0	genome.wustl.edu	37	17	18150067	18150067	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	18150067	18150067	G	A	SNP	FLII	ENST00000327031	human	ensembl	74_37	-1	known	silent	c.2892	p.G964	0.009	smart_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	FLII	HGNC	ENSG00000177731	tier1	-	-	89	0	0.00	44	29	39.73
FLOT1	0	genome.wustl.edu	37	6	30697904	30697904	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	30697904	30697904	G	A	SNP	FLOT1	ENST00000376389	human	ensembl	74_37	-1	known	silent	c.1149	p.S383	0.980	NULL	pfam_Band_7,smart_Band_7	-	no_errors	FLOT1	HGNC	ENSG00000137312	tier1	-	-	39	0	0.00	13	9	40.91
FLRT2	0	genome.wustl.edu	37	14	86089811	86089811	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	86089811	86089811	C	T	SNP	FLRT2	ENST00000330753	human	ensembl	74_37	+1	known	silent	c.1953	p.S651	0.922	NULL	pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT2	HGNC	ENSG00000185070	tier1	-	-	16	0	0.00	11	5	31.25
FLRT2	0	genome.wustl.edu	37	14	86090075	86090076	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	86090075	86090076	AA	-	DEL	FLRT2	ENST00000553650	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	FLRT2	HGNC	ENSG00000185070	tier1			44	0	0.00	25	12	32.43
FLT1	0	genome.wustl.edu	37	13	28893668	28893668	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	28893668	28893668	G	A	SNP	FLT1	ENST00000282397	human	ensembl	74_37	-1	known	nonsense	c.3178	p.R1060*	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR1_rcpt	-	no_errors	FLT1	HGNC	ENSG00000102755				11	0	0.00	14	3	17.65
FLYWCH1	0	genome.wustl.edu	37	16	2983467	2983467	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	2983467	2983467	C	A	SNP	FLYWCH1	ENST00000399667	human	ensembl	74_37	+1	known	missense	c.1133	p.P378Q	0.003	NULL	pfam_Znf_FLYWCH	-	no_errors	FLYWCH1	HGNC	ENSG00000059122	tier1	-	-	62	0	0.00	34	19	35.85
FMN2	0	genome.wustl.edu	37	1	240370225	240370225	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	240370225	240370225	G	T	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	missense	c.2113	p.A705S	0.002	NULL	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816	tier1	-	-	37	0	0.00	27	9	25.00
FMNL1	0	genome.wustl.edu	37	17	43319736	43319736	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	43319736	43319736	T	C	SNP	FMNL1	ENST00000328118	human	ensembl	74_37	+1	known	silent	c.1914	p.T638	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FMNL1	HGNC	ENSG00000184922	tier1	-	-	69	0	0.00	18	16	47.06
FNDC1	0	genome.wustl.edu	37	6	159653240	159653241	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	159653240	159653241	CT	-	DEL	FNDC1	ENST00000297267	human	ensembl	74_37	+1	known	frame_shift_del	c.1696_1697	p.L566fs	0.000:0.067	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC1	HGNC	ENSG00000164694	tier1			45	0	0.00	18	13	41.94
FOCAD	0	genome.wustl.edu	37	9	20988415	20988415	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	20988415	20988415	C	T	SNP	FOCAD	ENST00000338382	human	ensembl	74_37	+1	known	missense	c.4991	p.T1664M	1.000	pfam_DUF3028	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC	ENSG00000188352	tier1	-	-	33	0	0.00	21	13	38.24
FOSL2	0	genome.wustl.edu	37	2	28634811	28634813	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	28634811	28634813	GGA	-	DEL	FOSL2	ENST00000264716	human	ensembl	74_37	+1	known	in_frame_del	c.477_479	p.E162in_frame_del	1.000:1.000:1.000	pfam_bZIP,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	-	no_errors	FOSL2	HGNC	ENSG00000075426	tier1			33	0	0.00	23	16	41.03
FOXD1	0	genome.wustl.edu	37	5	72744084	72744086	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	72744084	72744086	TCC	-	DEL	FOXD1	ENST00000499003	human	ensembl	74_37	-1	known	in_frame_del	c.104_102	p.E34in_frame_del	0.996:0.998:0.999	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD1	HGNC	ENSG00000251493	tier1			20	0	0.00	16	8	33.33
FOXD4L5	0	genome.wustl.edu	37	9	70177789	70177789	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	70177789	70177789	G	A	SNP	FOXD4L5	ENST00000377420	human	ensembl	74_37	-1	known	silent	c.195	p.G65	0.026	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD4L5	HGNC	ENSG00000204779	tier1	-	-	84	0	0.00	68	12	15.00
FOXF1	0	genome.wustl.edu	37	16	86545069	86545069	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	86545069	86545069	C	0	DEL	FOXF1	ENST00000262426	human	ensembl	74_37	+1	known	frame_shift_del	c.894	p.L300fs	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXF1	HGNC	ENSG00000103241				10	0	0.00	10	4	28.57
FOXI2	0	genome.wustl.edu	37	10	129536832	129536832	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	129536832	129536832	A	G	SNP	FOXI2	ENST00000388920	human	ensembl	74_37	+1	known	missense	c.560	p.D187G	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXI2	HGNC	ENSG00000186766	tier1	-	-	64	0	0.00	28	19	40.43
FOXN3	0	genome.wustl.edu	37	14	89878615	89878615	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	89878615	89878615	C	T	SNP	FOXN3	ENST00000261302	human	ensembl	74_37	-1	known	missense	c.206	p.S69N	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXN3	HGNC	ENSG00000053254	tier1	-	-	44	0	0.00	32	12	27.27
FOXP1	0	genome.wustl.edu	37	3	71008342	71008344	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	71008342	71008344	TTT	-	DEL	FOXP1	ENST00000460805	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.439:0.024:0.024	-	-	-	no_errors	FOXP1	HGNC	ENSG00000114861	tier1			39	0	0.00	33	11	25.00
FOXP1	0	genome.wustl.edu	37	3	71026132	71026132	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	71026132	71026132	C	T	SNP	FOXP1	ENST00000318789	human	ensembl	74_37	-1	known	missense	c.1490	p.R497Q	1.000	pfam_TF_fork_head,smart_TF_fork_head,prints_TF_fork_head,pfscan_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,prints_TF_fork_head,pfscan_TF_fork_head	-	no_errors	FOXP1	HGNC	ENSG00000114861	tier1	-	-	55	0	0.00	56	6	9.68
FOXP4	0	genome.wustl.edu	37	6	41554855	41554855	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	41554855	41554855	C	T	SNP	FOXP4	ENST00000307972	human	ensembl	74_37	+1	known	missense	c.619	p.P207S	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXP4	HGNC	ENSG00000137166				9	0	0.00	3	5	62.50
FPGS	0	genome.wustl.edu	37	9	130569113	130569113	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	130569113	130569113	G	-	DEL	FPGS	ENST00000497386	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	FPGS	HGNC	ENSG00000136877	tier1			42	0	0.00	18	16	47.06
FRAS1	0	genome.wustl.edu	37	4	79350351	79350351	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	79350351	79350351	C	T	SNP	FRAS1	ENST00000264895	human	ensembl	74_37	+1	known	missense	c.4814	p.A1605V	0.277	NULL	pfam_Calx_beta,pfam_VWF_C,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_VWC_out,smart_VWF_C,smart_Furin_repeat,smart_EG-like_dom,smart_Calx_beta,pfscan_VWF_C	-	no_errors	FRAS1	HGNC	ENSG00000138759	tier1	-	-	91	0	0.00	59	44	42.72
FRAS1	0	genome.wustl.edu	37	4	79371317	79371317	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	79371317	79371317	G	A	SNP	FRAS1	ENST00000264895	human	ensembl	74_37	+1	known	missense	c.6287	p.R2096H	0.025	NULL	pfam_Calx_beta,pfam_VWF_C,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_VWC_out,smart_VWF_C,smart_Furin_repeat,smart_EG-like_dom,smart_Calx_beta,pfscan_VWF_C	-	no_errors	FRAS1	HGNC	ENSG00000138759	tier1	-	-	68	0	0.00	34	19	35.85
FREM2	0	genome.wustl.edu	37	13	39432168	39432168	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	39432168	39432168	A	C	SNP	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	missense	c.7213	p.T2405P	1.000	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	tier1	-	-	78	0	0.00	90	29	24.37
FRMD4A	0	genome.wustl.edu	37	10	13696452	13696452	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	13696452	13696452	G	-	DEL	FRMD4A	ENST00000357447	human	ensembl	74_37	-1	known	frame_shift_del	c.3014	p.P1005fs	1.000	NULL	pfam_DUF3338,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam	-	no_errors	FRMD4A	HGNC	ENSG00000151474	tier1			33	0	0.00	14	17	54.84
FRMD6	0	genome.wustl.edu	37	14	52156598	52156598	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	52156598	52156598	G	T	SNP	FRMD6	ENST00000344768	human	ensembl	74_37	+1	known	missense	c.44	p.R15L	1.000	smart_Band_41_domain	pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	-	no_errors	FRMD6	HGNC	ENSG00000139926				51	0	0.00	23	3	11.54
FRZB	0	genome.wustl.edu	37	2	183731079	183731079	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	183731079	183731079	C	T	SNP	FRZB	ENST00000295113	human	ensembl	74_37	-1	known	missense	c.202	p.A68T	1.000	pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom	pfam_Frizzled_dom,pfam_Netrin_module_non-TIMP,superfamily_Frizzled_dom,superfamily_TIMP-like_OB-fold,smart_Frizzled_dom,smart_Netrin_module_non-TIMP,pfscan_Frizzled_dom,pfscan_Netrin_domain	-	no_errors	FRZB	HGNC	ENSG00000162998	tier1	-	-	115	0	0.00	49	35	41.67
FSIP2	0	genome.wustl.edu	37	2	186658445	186658445	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	186658445	186658445	A	-	DEL	FSIP2	ENST00000343098	human	ensembl	74_37	+1	known	frame_shift_del	c.6849	p.I2285fs	0.143	NULL	NULL	-	no_errors	FSIP2	HGNC	ENSG00000188738	tier1			16	0	0.00	20	7	25.93
FSIP2	0	genome.wustl.edu	37	2	186666048	186666048	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	186666048	186666048	G	A	SNP	FSIP2	ENST00000343098	human	ensembl	74_37	+1	known	silent	c.12282	p.E4094	0.986	NULL	NULL	-	no_errors	FSIP2	HGNC	ENSG00000188738	tier1	-	-	51	0	0.00	30	22	42.31
FTMT	0	genome.wustl.edu	37	5	121187966	121187966	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	121187966	121187966	G	A	SNP	FTMT	ENST00000321339	human	ensembl	74_37	+1	known	missense	c.308	p.R103Q	0.999	pfam_Ferritin_DPS_dom,superfamily_Ferritin-like_SF,pfscan_Ferritin-like_diiron	pfam_Ferritin_DPS_dom,superfamily_Ferritin-like_SF,pfscan_Ferritin-like_diiron	-	no_errors	FTMT	HGNC	ENSG00000181867	tier1	-	-	47	0	0.00	33	19	36.54
FTSJ2	0	genome.wustl.edu	37	7	2275111	2275111	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	2275111	2275111	G	A	SNP	FTSJ2	ENST00000242257	human	ensembl	74_37	-1	known	silent	c.387	p.D129	1.000	pfam_rRNA_MeTrfase_FtsJ_dom,pirsf_rRNA-MeTfrase_E	pfam_rRNA_MeTrfase_FtsJ_dom,pirsf_rRNA-MeTfrase_E	-	no_errors	FTSJ2	HGNC	ENSG00000122687	tier1	-	-	38	0	0.00	23	12	34.29
FUBP1	0	genome.wustl.edu	37	1	78444659	78444659	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	78444659	78444659	G	-	DEL	FUBP1	ENST00000436586	human	ensembl	74_37	-1	known	frame_shift_del	c.30	p.S11fs	0.020	NULL	pfam_KH_dom_type_1,pfam_KH_dom_type_2,pfam_DUF1897,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FUBP1	HGNC	ENSG00000162613	tier1			112	0	0.00	50	29	36.71
FUT7	0	genome.wustl.edu	37	9	139926112	139926112	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	139926112	139926112	G	T	SNP	FUT7	ENST00000314412	human	ensembl	74_37	-1	known	missense	c.79	p.L27I	0.026	NULL	pfam_Glyco_trans_10	-	no_errors	FUT7	HGNC	ENSG00000180549	tier1	-	-	21	0	0.00	7	5	41.67
FZD10	0	genome.wustl.edu	37	12	130647719	130647719	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	130647719	130647719	G	A	SNP	FZD10	ENST00000229030	human	ensembl	74_37	+1	known	missense	c.232	p.G78S	1.000	pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD10	HGNC	ENSG00000111432	tier1	-	-	33	0	0.00	9	15	62.50
FZD10	0	genome.wustl.edu	37	12	130648109	130648109	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	130648109	130648109	G	A	SNP	FZD10	ENST00000229030	human	ensembl	74_37	+1	known	missense	c.622	p.A208T	1.000	NULL	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD10	HGNC	ENSG00000111432				19	0	0.00	13	3	18.75
FZR1	0	genome.wustl.edu	37	19	3534441	3534441	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	3534441	3534441	C	T	SNP	FZR1	ENST00000395095	human	ensembl	74_37	+1	known	missense	c.1370	p.A457V	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	FZR1	HGNC	ENSG00000105325	tier1	-	-	75	0	0.00	45	29	39.19
G2E3	0	genome.wustl.edu	37	14	31066642	31066642	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	31066642	31066642	C	T	SNP	G2E3	ENST00000206595	human	ensembl	74_37	+1	known	missense	c.545	p.A182V	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD	pfam_HECT,superfamily_HECT,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_HECT,pfscan_HECT	-	no_errors	G2E3	HGNC	ENSG00000092140	tier1	-	-	23	0	0.00	27	13	32.50
GAA	0	genome.wustl.edu	37	17	78078888	78078888	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	78078888	78078888	G	T	SNP	GAA	ENST00000302262	human	ensembl	74_37	+1	known	missense	c.503	p.R168L	0.822	superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	GAA	HGNC	ENSG00000171298	tier1	-	-	54	0	0.00	64	4	5.88
GABRA1	0	genome.wustl.edu	37	5	161300245	161300246	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	161300245	161300246	-	T	INS	GABRA1	ENST00000023897	human	ensembl	74_37	+1	known	frame_shift_ins	c.378_379	p.H128fs	0.975:1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Neur_channel,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa1_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA1	HGNC	ENSG00000022355	tier1			61	0	0.00	52	18	25.71
GABRB1	0	genome.wustl.edu	37	4	47427773	47427773	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	47427773	47427773	G	A	SNP	GABRB1	ENST00000295454	human	ensembl	74_37	+1	known	missense	c.1163	p.S388N	0.191	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAb_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRB1	HGNC	ENSG00000163288	tier1	-	-	59	0	0.00	32	16	33.33
GABRB3	0	genome.wustl.edu	37	15	26806289	26806289	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	26806289	26806289	G	A	SNP	GABRB3	ENST00000299267	human	ensembl	74_37	-1	known	silent	c.870	p.N290	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAb_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRB3	HGNC	ENSG00000166206	tier1	-	-	77	0	0.00	45	32	41.56
GABRD	0	genome.wustl.edu	37	1	1961475	1961475	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	1961475	1961475	G	A	SNP	GABRD	ENST00000378585	human	ensembl	74_37	+1	known	silent	c.1113	p.T371	0.732	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAAd_rcpt	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_GABAAd_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRD	HGNC	ENSG00000187730	tier1	-	-	57	0	0.00	40	4	9.09
GABRG2	0	genome.wustl.edu	37	5	161580287	161580288	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	161580287	161580288	-	A	INS	GABRG2	ENST00000356592	human	ensembl	74_37	+1	known	frame_shift_ins	c.1341_1342	p.M448fs	1.000:1.000	superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABBAg_rcpt,prints_GABAA_rcpt,prints_GABBAg2_rcpt,prints_GABAAa_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRG2	HGNC	ENSG00000113327	tier1			71	0	0.00	37	20	35.09
GAK	0	genome.wustl.edu	37	4	870338	870338	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	870338	870338	G	T	SNP	GAK	ENST00000314167	human	ensembl	74_37	-1	known	silent	c.2034	p.A678	0.060	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pfscan_Tensin_phosphatase_C2-dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Tensin_phosphatase_C2-dom,pfam_DnaJ_domain,superfamily_Kinase-like_dom,superfamily_DnaJ_domain,superfamily_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_DnaJ_domain,pfscan_Prot_kinase_dom,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom,pfscan_DnaJ_domain	-	no_errors	GAK	HGNC	ENSG00000178950	tier1	-	-	59	0	0.00	47	4	7.84
GAK	0	genome.wustl.edu	37	4	884355	884355	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	884355	884355	G	-	DEL	GAK	ENST00000314167	human	ensembl	74_37	-1	known	frame_shift_del	c.1046	p.P349fs	0.018	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Tensin_phosphatase_C2-dom,pfam_DnaJ_domain,superfamily_Kinase-like_dom,superfamily_DnaJ_domain,superfamily_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_DnaJ_domain,pfscan_Prot_kinase_dom,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom,pfscan_DnaJ_domain	-	no_errors	GAK	HGNC	ENSG00000178950	tier1			79	0	0.00	39	27	40.91
GAL3ST1	0	genome.wustl.edu	37	22	30951276	30951276	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	30951276	30951276	G	A	SNP	GAL3ST1	ENST00000338911	human	ensembl	74_37	-1	known	silent	c.936	p.N312	1.000	pfam_Gal-3-0_sulfotransfrase	pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	-	no_errors	GAL3ST1	HGNC	ENSG00000128242	tier1	-	-	96	0	0.00	51	25	32.05
GAL3ST1	0	genome.wustl.edu	37	22	30953322	30953322	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	30953322	30953322	C	T	SNP	GAL3ST1	ENST00000338911	human	ensembl	74_37	-1	known	missense	c.58	p.A20T	0.021	pfam_Gal-3-0_sulfotransfrase	pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	-	no_errors	GAL3ST1	HGNC	ENSG00000128242	tier1	-	-	45	0	0.00	8	8	50.00
GAL3ST3	0	genome.wustl.edu	37	11	65810450	65810450	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	65810450	65810450	C	T	SNP	GAL3ST3	ENST00000312006	human	ensembl	74_37	-1	known	missense	c.824	p.R275H	1.000	pfam_Gal-3-0_sulfotransfrase	pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	-	no_errors	GAL3ST3	HGNC	ENSG00000175229	tier1	-	-	11	0	0.00	9	6	40.00
GALE	0	genome.wustl.edu	37	1	24124802	24124804	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	24124802	24124804	TTT	-	DEL	GALE	ENST00000467493	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.017:0.021:0.022	-	-	-	no_errors	GALE	HGNC	ENSG00000117308	tier1			52	0	0.00	30	6	16.67
GALNT10	0	genome.wustl.edu	37	5	153789185	153789185	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	153789185	153789185	G	A	SNP	GALNT10	ENST00000297107	human	ensembl	74_37	+1	known	missense	c.1249	p.A417T	0.672	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT10	HGNC	ENSG00000164574	tier1	-	-	37	0	0.00	27	15	35.71
GALR1	0	genome.wustl.edu	37	18	74962958	74962958	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	74962958	74962958	G	A	SNP	GALR1	ENST00000299727	human	ensembl	74_37	+1	known	missense	c.454	p.A152T	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Galanin_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GAL1_rcpt,prints_GPCR_Rhodpsn,prints_Galanin_rcpt,prints_NPY_rcpt	-	no_errors	GALR1	HGNC	ENSG00000166573				26	0	0.00	14	5	26.32
GALR2	0	genome.wustl.edu	37	17	74073035	74073035	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	74073035	74073035	C	T	SNP	GALR2	ENST00000329003	human	ensembl	74_37	+1	known	silent	c.687	p.R229	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_7TM,prints_GAL2_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Galanin_rcpt,prints_GAL2_rcpt	-	no_errors	GALR2	HGNC	ENSG00000182687	tier1	-	-	53	0	0.00	13	18	58.06
GAPDHS	0	genome.wustl.edu	37	19	36034636	36034636	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	36034636	36034636	C	T	SNP	GAPDHS	ENST00000222286	human	ensembl	74_37	+1	known	silent	c.963	p.L321	0.952	pirsf_GlycerAld/Erythrose_P_DH,pfam_GlycerAld_3-P_DH_cat,tigrfam_Glyceraldehyde-3-P_DH_1	pirsf_GlycerAld/Erythrose_P_DH,pfam_GlycerAld_3-P_DH_cat,pfam_GlycerAld_3-P_DH_NAD(P)-bd,smart_GlycerAld_3-P_DH_NAD(P)-bd,prints_GlycerAld/Erythrose_P_DH,tigrfam_Glyceraldehyde-3-P_DH_1	-	no_errors	GAPDHS	HGNC	ENSG00000105679	tier1	-	-	72	0	0.00	38	27	41.54
GARS	0	genome.wustl.edu	37	7	30661090	30661090	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	30661090	30661090	G	T	SNP	GARS	ENST00000389266	human	ensembl	74_37	+1	known	missense	c.1441	p.V481L	1.000	pfscan_aa-tRNA-synth_II,tigrfam_tRNA-synt_gly	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_WHEP-TRS,superfamily_Anticodon-bd,superfamily_S15_NS1_RNA-bd,prints_tRNA-synt_gly,pfscan_aa-tRNA-synth_II,pfscan_WHEP-TRS,tigrfam_tRNA-synt_gly	-	no_errors	GARS	HGNC	ENSG00000106105				59	0	0.00	58	4	6.45
GAS5	0	genome.wustl.edu	37	1	173834997	173834997	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	173834997	173834997	G	A	SNP	GAS5	ENST00000414075	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GAS5	HGNC	ENSG00000234741	tier1	-	-	75	0	0.00	52	27	34.18
GATA3	0	genome.wustl.edu	37	10	8105978	8105979	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	8105978	8105979	-	G	INS	GATA3	ENST00000379328	human	ensembl	74_37	+1	known	frame_shift_ins	c.801_802	p.A268fs	0.984:1.000	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485	tier1			66	0	0.00	33	25	43.10
GBE1	0	genome.wustl.edu	37	3	81635292	81635292	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	81635292	81635292	C	-	DEL	GBE1	ENST00000429644	human	ensembl	74_37	-1	known	frame_shift_del	c.1286	p.G429fs	0.014	superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_A-amylase_b_C,pfam_Glyco_hydro_13_cat_dom,pfam_Glyco_hydro_13_N,superfamily_Glycoside_hydrolase_SF,superfamily_Ig_E-set,smart_Glyco_hydro_13_sub_cat_dom	-	no_errors	GBE1	HGNC	ENSG00000114480	tier1			27	0	0.00	24	14	36.84
GBF1	0	genome.wustl.edu	37	10	104136853	104136853	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	104136853	104136853	G	A	SNP	GBF1	ENST00000369983	human	ensembl	74_37	+1	known	missense	c.4447	p.V1483M	0.999	NULL	pfam_Sec7_dom,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	GBF1	HGNC	ENSG00000107862	tier1	-	-	57	0	0.00	25	20	44.44
GBP3	0	genome.wustl.edu	37	1	89473442	89473442	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	89473442	89473442	T	-	DEL	GBP3	ENST00000370481	human	ensembl	74_37	-1	known	frame_shift_del	c.1753	p.T585fs	0.000	NULL	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP3	HGNC	ENSG00000117226	tier1			147	0	0.00	116	54	31.76
GCC2	0	genome.wustl.edu	37	2	109086477	109086477	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	109086477	109086477	A	-	DEL	GCC2	ENST00000309863	human	ensembl	74_37	+1	known	frame_shift_del	c.692	p.N233fs	1.000	NULL	pfam_GRIP,superfamily_GRIP,superfamily_tRNA-bd_arm,smart_GRIP,pfscan_GRIP	-	no_errors	GCC2	HGNC	ENSG00000135968	tier1			14	0	0.00	16	4	20.00
GCFC2	0	genome.wustl.edu	37	2	75916352	75916352	+	Splice_Site	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	75916352	75916352	C	A	SNP	GCFC2	ENST00000321027	human	ensembl	74_37	-1	known	splice_site	c.1340-1	e10-1	1.000	-	-	-	no_errors	GCFC2	HGNC	ENSG00000005436	tier1	-	-	27	0	0.00	23	11	32.35
GCGR	0	genome.wustl.edu	37	17	79769607	79769607	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	79769607	79769607	C	T	SNP	GCGR	ENST00000400723	human	ensembl	74_37	+1	known	silent	c.738	p.G246	0.932	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_glucagon_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_GLP1/glucagon_rcpt,prints_GPCR_2_GIP_rcpt	-	no_errors	GCGR	HGNC	ENSG00000215644	tier1	-	-	123	0	0.00	69	37	34.58
GDAP2	0	genome.wustl.edu	37	1	118430389	118430389	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	118430389	118430389	G	A	SNP	GDAP2	ENST00000369443	human	ensembl	74_37	-1	known	missense	c.961	p.R321C	1.000	NULL	pfam_Macro_dom,superfamily_CRAL-TRIO_dom,smart_Macro_dom,smart_CRAL-TRIO_dom,pfscan_Macro_dom	-	no_errors	GDAP2	HGNC	ENSG00000196505	tier1	rs146263543	-	119	0	0.00	91	41	31.06
GFPT2	0	genome.wustl.edu	37	5	179745817	179745817	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	179745817	179745817	T	C	SNP	GFPT2	ENST00000253778	human	ensembl	74_37	-1	known	missense	c.934	p.M312V	1.000	tigrfam_GlmS_trans	pfam_SIS,pfam_GATase_dom,tigrfam_GlmS_trans	-	no_errors	GFPT2	HGNC	ENSG00000131459	tier1	-	-	58	0	0.00	19	21	52.50
GGNBP1	0	genome.wustl.edu	37	6	33556739	33556739	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	33556739	33556739	T	C	SNP	GGNBP1	ENST00000374458	human	ensembl	74_37	+1	known	missense	c.266	p.I89T	0.000	NULL	NULL	-	no_errors	GGNBP1	HGNC	ENSG00000204188	tier1	-	-	63	0	0.00	35	20	36.36
GGNBP2	0	genome.wustl.edu	37	17	34913100	34913100	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	34913100	34913100	C	T	SNP	GGNBP2	ENST00000304718	human	ensembl	74_37	+1	known	missense	c.352	p.P118S	1.000	NULL	NULL	-	no_errors	GGNBP2	HGNC	ENSG00000005955	tier1	-	-	91	0	0.00	41	29	41.43
GGNBP2	0	genome.wustl.edu	37	17	34934522	34934522	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	34934522	34934522	C	T	SNP	GGNBP2	ENST00000304718	human	ensembl	74_37	+1	known	missense	c.751	p.R251W	1.000	NULL	NULL	-	no_errors	GGNBP2	HGNC	ENSG00000005955	tier1	-	-	75	0	0.00	35	28	44.44
GGT7	0	genome.wustl.edu	37	20	33437806	33437806	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	33437806	33437806	G	A	SNP	GGT7	ENST00000336431	human	ensembl	74_37	-1	novel	missense	c.1783	p.R595C	1.000	pfam_GGT_peptidase	pfam_GGT_peptidase,prints_GGT_peptidase	-	no_errors	GGT7	HGNC	ENSG00000131067	tier1	-	-	88	0	0.00	39	30	43.48
GIPC1	0	genome.wustl.edu	37	19	14590322	14590322	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	14590322	14590322	G	A	SNP	GIPC1	ENST00000345425	human	ensembl	74_37	-1	known	missense	c.670	p.R224C	0.995	superfamily_PDZ,pirsf_UCP038083_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_UCP038083_PDZ,pfscan_PDZ	-	no_errors	GIPC1	HGNC	ENSG00000123159	tier1	-	-	32	0	0.00	14	12	46.15
GIPC3	0	genome.wustl.edu	37	19	3589527	3589527	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	3589527	3589527	G	-	DEL	GIPC3	ENST00000322315	human	ensembl	74_37	+1	known	frame_shift_del	c.679	p.A229fs	0.803	pirsf_UCP038083_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_UCP038083_PDZ,pfscan_PDZ	-	no_errors	GIPC3	HGNC	ENSG00000179855	tier1			80	0	0.00	53	32	37.65
GJA3	0	genome.wustl.edu	37	13	20716933	20716933	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	20716933	20716933	G	A	SNP	GJA3	ENST00000241125	human	ensembl	74_37	-1	known	silent	c.495	p.A165	0.996	pfam_Connexin_CCC,prints_Connexin	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin46	-	no_errors	GJA3	HGNC	ENSG00000121743	tier1	-	-	68	0	0.00	49	49	50.00
GLI3	0	genome.wustl.edu	37	7	42005573	42005573	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	42005573	42005573	G	0	DEL	GLI3	ENST00000395925	human	ensembl	74_37	-1	known	frame_shift_del	c.3098	p.P1033fs	0.131	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI3	HGNC	ENSG00000106571				20	0	0.00	5	3	37.50
GLI4	0	genome.wustl.edu	37	8	144358905	144358905	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	144358905	144358905	C	T	SNP	GLI4	ENST00000340042	human	ensembl	74_37	+1	known	silent	c.1062	p.G354	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI4	HGNC	ENSG00000250571	tier1	-	-	33	0	0.00	27	16	37.21
GLIS1	0	genome.wustl.edu	37	1	53990500	53990500	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	53990500	53990500	G	A	SNP	GLIS1	ENST00000312233	human	ensembl	74_37	-1	known	missense	c.1018	p.R340C	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLIS1	HGNC	ENSG00000174332	tier1	-	-	62	0	0.00	36	17	32.08
GLIS3	0	genome.wustl.edu	37	9	4286007	4286007	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	4286007	4286007	T	-	DEL	GLIS3	ENST00000471664	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GLIS3	HGNC	ENSG00000107249	tier1			45	0	0.00	20	9	31.03
GLS2	0	genome.wustl.edu	37	12	56881845	56881845	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	56881845	56881845	G	T	SNP	GLS2	ENST00000311966	human	ensembl	74_37	-1	known	silent	c.58	p.R20	0.898	NULL	pfam_Glutaminase,pfam_Ankyrin_rpt,superfamily_Beta-lactam/transpept-like,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_Glutaminase	-	no_errors	GLS2	HGNC	ENSG00000135423				24	0	0.00	27	2	6.90
GMEB1	0	genome.wustl.edu	37	1	29041386	29041387	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	29041386	29041387	AA	-	DEL	GMEB1	ENST00000480454	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.252:0.049	-	-	-	no_errors	GMEB1	HGNC	ENSG00000162419	tier1			17	0	0.00	5	6	54.55
GMIP	0	genome.wustl.edu	37	19	19745476	19745476	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	19745476	19745476	C	T	SNP	GMIP	ENST00000203556	human	ensembl	74_37	-1	known	missense	c.1924	p.A642T	0.756	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	GMIP	HGNC	ENSG00000089639	tier1	-	-	77	0	0.00	35	20	36.36
GMIP	0	genome.wustl.edu	37	19	19748865	19748865	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	19748865	19748865	G	A	SNP	GMIP	ENST00000203556	human	ensembl	74_37	-1	known	missense	c.791	p.A264V	0.009	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	GMIP	HGNC	ENSG00000089639	tier1	-	-	39	0	0.00	13	8	38.10
GNA12	0	genome.wustl.edu	37	7	2768249	2768249	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	2768249	2768249	C	A	SNP	GNA12	ENST00000491117	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	GNA12	HGNC	ENSG00000146535	tier1	-	-	16	0	0.00	15	16	51.61
GNAI2	0	genome.wustl.edu	37	3	50294248	50294248	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	50294248	50294248	C	T	SNP	GNAI2	ENST00000313601	human	ensembl	74_37	+1	known	silent	c.687	p.S229	1.000	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_I,prints_Fungi_Gprotein_alpha	-	no_errors	GNAI2	HGNC	ENSG00000114353	tier1	-	-	145	0	0.00	59	43	42.16
GNB1	0	genome.wustl.edu	37	1	1720538	1720538	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	1720538	1720538	G	A	SNP	GNB1	ENST00000378609	human	ensembl	74_37	-1	known	silent	c.870	p.D290	0.857	pirsf_Guanine_nucleotide-bd_bsu,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pirsf_Guanine_nucleotide-bd_bsu,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_Gprotein_B,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	GNB1	HGNC	ENSG00000078369	tier1	-	-	40	0	0.00	22	10	31.25
GNB1L	0	genome.wustl.edu	37	22	19808206	19808206	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	19808206	19808206	G	A	SNP	GNB1L	ENST00000329517	human	ensembl	74_37	-1	known	missense	c.169	p.R57W	0.978	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	GNB1L	HGNC	ENSG00000185838	tier1	rs138225912	-	69	0	0.00	23	27	54.00
GNE	0	genome.wustl.edu	37	9	36249366	36249366	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	36249366	36249366	C	T	SNP	GNE	ENST00000396594	human	ensembl	74_37	-1	known	missense	c.80	p.R27Q	0.000	NULL	pfam_UDP_GlcNAc_Epimerase_2,pfam_ROK,prints_Hexokinase,tigrfam_UDP-GlcNAc_Epase	-	no_errors	GNE	HGNC	ENSG00000159921				14	0	0.00	12	4	25.00
GOLGA3	0	genome.wustl.edu	37	12	133349866	133349866	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	133349866	133349866	C	T	SNP	GOLGA3	ENST00000204726	human	ensembl	74_37	-1	known	missense	c.4322	p.S1441N	1.000	NULL	superfamily_Prefoldin	-	no_errors	GOLGA3	HGNC	ENSG00000090615	tier1	-	-	32	0	0.00	12	15	55.56
GOLGA6A	0	genome.wustl.edu	37	15	74363576	74363576	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	74363576	74363576	C	A	SNP	GOLGA6A	ENST00000290438	human	ensembl	74_37	-1	known	missense	c.1843	p.G615C	0.563	NULL	NULL	-	no_errors	GOLGA6A	HGNC	ENSG00000159289	tier1	-	-	29	0	0.00	20	16	44.44
GOLGA6C	0	genome.wustl.edu	37	15	75558448	75558448	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	75558448	75558448	G	A	SNP	GOLGA6C	ENST00000300576	human	ensembl	74_37	+1	known	missense	c.850	p.E284K	0.999	NULL	NULL	-	no_errors	GOLGA6C	HGNC	ENSG00000167195	tier1	-	-	41	0	0.00	81	17	17.35
GOLGA6C	0	genome.wustl.edu	37	15	75562260	75562260	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	75562260	75562260	C	T	SNP	GOLGA6C	ENST00000300576	human	ensembl	74_37	+1	known	missense	c.1888	p.P630S	0.994	NULL	NULL	-	no_errors	GOLGA6C	HGNC	ENSG00000167195	tier1	-	-	27	0	0.00	11	6	33.33
GOLGA6L1	0	genome.wustl.edu	37	15	22742753	22742753	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	22742753	22742753	C	T	SNP	GOLGA6L1	ENST00000316397	human	ensembl	74_37	+1	known	missense	c.1138	p.R380W	0.069	prints_Tropomyosin	superfamily_Ribosomal_L7/12_C/ClpS-like,prints_Tropomyosin	-	no_errors	GOLGA6L1	HGNC	ENSG00000197414	tier1	-	-	532	0	0.00	371	96	20.56
GOLGA6L3	0	genome.wustl.edu	37	15	83014112	83014112	+	Silent	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	83014112	83014112	A	T	SNP	GOLGA6L3	ENST00000557886	human	ensembl	74_37	-1	putative	silent	c.471	p.S157	0.343	NULL	NULL	-	no_errors	RP13-996F3.4	Clone_based_vega_gene	ENSG00000259243	tier1	-	-	55	0	0.00	63	12	15.79
GOLGA8B	0	genome.wustl.edu	37	15	34820022	34820022	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	34820022	34820022	C	T	SNP	GOLGA8B	ENST00000438958	human	ensembl	74_37	-1	known	silent	c.1713	p.A571	1.000	NULL	NULL	-	no_errors	GOLGA8B	HGNC	ENSG00000215252	tier1	-	-	205	0	0.00	131	35	21.08
GOLIM4	0	genome.wustl.edu	37	3	167747677	167747677	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	167747677	167747677	G	T	SNP	GOLIM4	ENST00000470487	human	ensembl	74_37	-1	known	missense	c.1324	p.H442N	0.012	NULL	NULL	-	no_errors	GOLIM4	HGNC	ENSG00000173905				64	0	0.00	61	4	6.15
GON4L	0	genome.wustl.edu	37	1	155823541	155823541	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	155823541	155823541	C	T	SNP	GON4L	ENST00000368331	human	ensembl	74_37	-1	known	missense	c.31	p.V11M	0.001	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580	tier1	-	-	92	0	0.00	85	34	28.57
GOT1L1	0	genome.wustl.edu	37	8	37791834	37791834	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	37791834	37791834	T	-	DEL	GOT1L1	ENST00000307599	human	ensembl	74_37	-1	known	frame_shift_del	c.1243	p.T415fs	0.000	NULL	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase,prints_Asp_trans	-	no_errors	GOT1L1	HGNC	ENSG00000169154	tier1			79	0	0.00	87	24	21.62
GPALPP1	0	genome.wustl.edu	37	13	45602078	45602078	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	45602078	45602078	A	-	DEL	GPALPP1	ENST00000361121	human	ensembl	74_37	+1	known	frame_shift_del	c.963	p.K323fs	1.000	pfam_DUF3752	pfam_DUF3752	-	no_errors	GPALPP1	HGNC	ENSG00000133114	tier1			70	0	0.00	118	12	9.23
GPATCH4	0	genome.wustl.edu	37	1	156571203	156571203	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	156571203	156571203	T	C	SNP	GPATCH4	ENST00000438976	human	ensembl	74_37	-1	known	missense	c.29	p.D10G	0.007	NULL	pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	GPATCH4	HGNC	ENSG00000160818	tier1	-	-	38	0	0.00	34	19	35.85
GPIHBP1	0	genome.wustl.edu	37	8	144297286	144297286	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	144297286	144297286	A	G	SNP	GPIHBP1	ENST00000330824	human	ensembl	74_37	+1	known	missense	c.448	p.T150A	0.000	NULL	pfam_LY6_UPAR	-	no_errors	GPIHBP1	HGNC	ENSG00000182851	tier1	-	-	32	0	0.00	17	12	41.38
GPNMB	0	genome.wustl.edu	37	7	23313743	23313743	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	23313743	23313743	G	T	SNP	GPNMB	ENST00000381990	human	ensembl	74_37	+1	known	missense	c.1619	p.G540V	0.348	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_PKD/Chitinase_dom,pfscan_PKD_dom	-	no_errors	GPNMB	HGNC	ENSG00000136235	tier1	-	-	58	0	0.00	45	4	8.16
GPR101	0	genome.wustl.edu	37	X	136113358	136113358	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	136113358	136113358	G	A	SNP	GPR101	ENST00000298110	human	ensembl	74_37	-1	known	missense	c.476	p.A159V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR101	HGNC	ENSG00000165370	tier1	-	-	39	0	0.00	6	25	80.65
GPR114	0	genome.wustl.edu	37	16	57600566	57600566	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	57600566	57600566	G	-	DEL	GPR114	ENST00000340339	human	ensembl	74_37	+1	known	frame_shift_del	c.602	p.G203fs	0.995	pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom	pfam_GPCR_2_secretin-like,pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_orphan_rcpt_GPR56	-	no_errors	GPR114	HGNC	ENSG00000159618	tier1			32	0	0.00	14	5	26.32
GPR115	0	genome.wustl.edu	37	6	47678531	47678531	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	47678531	47678531	T	C	SNP	GPR115	ENST00000371220	human	ensembl	74_37	+1	known	missense	c.380	p.F127S	0.471	prints_GPCR_2_Ig-hepta_rcpt	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_Ig-hepta_rcpt	-	no_errors	GPR115	HGNC	ENSG00000153294	tier1	-	-	59	0	0.00	48	23	31.94
GPR115	0	genome.wustl.edu	37	6	47678561	47678561	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	47678561	47678561	A	-	DEL	GPR115	ENST00000371220	human	ensembl	74_37	+1	known	frame_shift_del	c.410	p.K139fs	0.923	prints_GPCR_2_Ig-hepta_rcpt	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_Ig-hepta_rcpt	-	no_errors	GPR115	HGNC	ENSG00000153294	tier1			72	0	0.00	38	32	45.71
GPR116	0	genome.wustl.edu	37	6	46851912	46851912	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	46851912	46851912	C	T	SNP	GPR116	ENST00000265417	human	ensembl	74_37	-1	known	missense	c.425	p.R142H	0.000	prints_GPCR_2_Ig-hepta_rcpt	pfam_GPCR_2_secretin-like,pfam_SEA_dom,pfam_GPS_dom,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom,prints_GPCR_2_Ig-hepta_rcpt,prints_GPCR_2_secretin-like	-	no_errors	GPR116	HGNC	ENSG00000069122	tier1	-	-	45	0	0.00	25	11	30.56
GPR123	0	genome.wustl.edu	37	10	134902466	134902466	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	134902466	134902466	G	0	DEL	GPR123	ENST00000607359	human	ensembl	74_37	+1	putative	frame_shift_del	c.1685	p.G564fs	0.000	NULL	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	-	no_errors	GPR123	HGNC	ENSG00000197177				24	0	0.00	21	10	32.26
GPR124	0	genome.wustl.edu	37	8	37692814	37692814	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	37692814	37692814	C	T	SNP	GPR124	ENST00000412232	human	ensembl	74_37	+1	known	silent	c.1731	p.G577	0.828	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom	-	no_errors	GPR124	HGNC	ENSG00000020181	tier1	-	-	74	0	0.00	34	18	34.62
GPR124	0	genome.wustl.edu	37	8	37696506	37696506	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	37696506	37696506	C	T	SNP	GPR124	ENST00000412232	human	ensembl	74_37	+1	known	silent	c.2292	p.G764	0.025	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom	-	no_errors	GPR124	HGNC	ENSG00000020181	tier1	rs147055217	-	50	0	0.00	34	11	24.44
GPR144	0	genome.wustl.edu	37	9	127214852	127214852	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	127214852	127214852	G	A	SNP	GPR144	ENST00000334810	human	ensembl	74_37	+1	known	missense	c.188	p.R63Q	0.027	superfamily_C-type_lectin_fold	pfam_GPCR_2_secretin-like,pfam_Pentaxin,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_C-type_lectin_fold,smart_Pentaxin,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_Pentaxin,prints_GPCR_2_secretin-like	-	no_errors	GPR144	HGNC	ENSG00000180264	tier1	-	-	104	0	0.00	58	24	29.27
GPR144	0	genome.wustl.edu	37	9	127220451	127220451	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	127220451	127220451	C	A	SNP	GPR144	ENST00000334810	human	ensembl	74_37	+1	known	missense	c.1621	p.L541I	0.097	NULL	pfam_GPCR_2_secretin-like,pfam_Pentaxin,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_C-type_lectin_fold,smart_Pentaxin,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_Pentaxin,prints_GPCR_2_secretin-like	-	no_errors	GPR144	HGNC	ENSG00000180264	tier1	-	-	51	0	0.00	23	19	45.24
GPR158	0	genome.wustl.edu	37	10	25889407	25889407	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	25889407	25889407	T	-	DEL	GPR158	ENST00000490549	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GPR158	HGNC	ENSG00000151025	tier1			9	0	0.00	4	3	42.86
GPR174	0	genome.wustl.edu	37	X	78427238	78427238	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	78427238	78427238	C	T	SNP	GPR174	ENST00000276077	human	ensembl	74_37	+1	known	missense	c.734	p.P245L	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR174	HGNC	ENSG00000147138	tier1	-	-	15	0	0.00	3	14	82.35
GPR18	0	genome.wustl.edu	37	13	99907471	99907471	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	99907471	99907471	G	A	SNP	GPR18	ENST00000340807	human	ensembl	74_37	-1	known	missense	c.656	p.T219M	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR18	HGNC	ENSG00000125245	tier1	-	-	60	0	0.00	38	19	33.33
GPR183	0	genome.wustl.edu	37	13	99947438	99947438	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	99947438	99947438	C	A	SNP	GPR183	ENST00000376414	human	ensembl	74_37	-1	known	missense	c.962	p.R321M	1.000	pfam_7TM_GPCR_olfarory/Srsx	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR183	HGNC	ENSG00000169508	tier1	-	-	84	0	0.00	84	22	20.75
GPR20	0	genome.wustl.edu	37	8	142367058	142367058	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	142367058	142367058	G	A	SNP	GPR20	ENST00000377741	human	ensembl	74_37	-1	known	silent	c.966	p.S322	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR20	HGNC	ENSG00000204882	tier1	-	-	89	0	0.00	79	30	27.52
GPR20	0	genome.wustl.edu	37	8	142367352	142367352	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	142367352	142367352	C	T	SNP	GPR20	ENST00000377741	human	ensembl	74_37	-1	known	silent	c.672	p.S224	0.005	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR20	HGNC	ENSG00000204882	tier1	-	-	47	0	0.00	27	16	37.21
GPR20	0	genome.wustl.edu	37	8	142367375	142367375	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	142367375	142367375	C	T	SNP	GPR20	ENST00000377741	human	ensembl	74_37	-1	known	missense	c.649	p.G217S	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR20	HGNC	ENSG00000204882	tier1	-	-	44	0	0.00	28	14	33.33
GPR37	0	genome.wustl.edu	37	7	124387326	124387326	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	124387326	124387326	G	A	SNP	GPR37	ENST00000303921	human	ensembl	74_37	-1	known	silent	c.1095	p.N365	0.998	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR37_orph,prints_GPCR_Rhodpsn	-	no_errors	GPR37	HGNC	ENSG00000170775	tier1	-	-	118	0	0.00	64	32	32.99
GPR68	0	genome.wustl.edu	37	14	91700596	91700596	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	91700596	91700596	C	T	SNP	GPR68	ENST00000238699	human	ensembl	74_37	-1	known	missense	c.829	p.A277T	0.054	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_OGR1_rcpt,prints_GPCR_Rhodpsn,prints_Psych_rcpt	-	no_errors	GPR68	HGNC	ENSG00000119714	tier1	-	-	44	0	0.00	29	25	46.30
GPR83	0	genome.wustl.edu	37	11	94134356	94134356	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	94134356	94134356	G	T	SNP	GPR83	ENST00000243673	human	ensembl	74_37	-1	known	missense	c.58	p.H20N	0.003	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	GPR83	HGNC	ENSG00000123901	tier1	-	-	18	0	0.00	13	11	45.83
GPR84	0	genome.wustl.edu	37	12	54756738	54756738	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	54756738	54756738	G	T	SNP	GPR84	ENST00000267015	human	ensembl	74_37	-1	known	missense	c.898	p.P300T	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR84	HGNC	ENSG00000139572	tier1	-	-	85	0	0.00	67	4	5.63
GPR84	0	genome.wustl.edu	37	12	54757554	54757554	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	54757554	54757554	C	-	DEL	GPR84	ENST00000267015	human	ensembl	74_37	-1	known	frame_shift_del	c.82	p.V28fs	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR84	HGNC	ENSG00000139572	tier1			60	0	0.00	29	16	35.56
GPR87	0	genome.wustl.edu	37	3	151012592	151012593	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	151012592	151012593	-	A	INS	GPR87	ENST00000260843	human	ensembl	74_37	-1	known	frame_shift_ins	c.442_441	p.G147fs	1.000:0.999	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_P2Y14_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_P2Y13_rcpt,prints_P2Y14_rcpt	-	no_errors	GPR87	HGNC	ENSG00000138271	tier1			45	0	0.00	22	7	24.14
GPR89A	0	genome.wustl.edu	37	1	145811901	145811901	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	145811901	145811901	C	T	SNP	GPR89A	ENST00000313835	human	ensembl	74_37	-1	known	missense	c.308	p.R103Q	1.000	NULL	pfam_ABA_GPCR_dom,pfam_Golgi_pH-regulator_cons_dom	-	no_errors	GPR89A	HGNC	ENSG00000117262	tier1	-	-	35	0	0.00	37	18	32.73
GPR98	0	genome.wustl.edu	37	5	90124781	90124781	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	90124781	90124781	T	-	DEL	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	frame_shift_del	c.16389	p.F5465fs	0.351	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	tier1			28	0	0.00	13	10	43.48
GPRC5B	0	genome.wustl.edu	37	16	19884026	19884026	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	19884026	19884026	G	T	SNP	GPRC5B	ENST00000537135	human	ensembl	74_37	-1	known	missense	c.220	p.L74M	1.000	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPRC5B	HGNC	ENSG00000167191	tier1	-	-	60	0	0.00	21	22	51.16
GPRC6A	0	genome.wustl.edu	37	6	117113925	117113925	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	117113925	117113925	G	T	SNP	GPRC6A	ENST00000310357	human	ensembl	74_37	-1	known	missense	c.2161	p.L721I	0.000	pfam_GPCR_3_C,pfscan_GPCR_3_C,prints_GPCR_3	pfam_GPCR_3_C,pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_vmron_rcpt_2	-	no_errors	GPRC6A	HGNC	ENSG00000173612	tier1	-	-	46	0	0.00	24	12	33.33
GPX5	0	genome.wustl.edu	37	6	28502011	28502011	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	28502011	28502011	A	-	DEL	GPX5	ENST00000442674	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GPX5	HGNC	ENSG00000224586	tier1			13	0	0.00	4	5	55.56
GRB14	0	genome.wustl.edu	37	2	165365288	165365288	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	165365288	165365288	T	-	DEL	GRB14	ENST00000263915	human	ensembl	74_37	-1	known	frame_shift_del	c.891	p.K297fs	0.015	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_BPS-dom,pfam_SH2,pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SH2,prints_SH2	-	no_errors	GRB14	HGNC	ENSG00000115290	tier1			41	0	0.00	28	16	36.36
GREB1	0	genome.wustl.edu	37	2	11758984	11758984	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	11758984	11758984	G	A	SNP	GREB1	ENST00000234142	human	ensembl	74_37	+1	known	missense	c.3983	p.R1328Q	0.957	NULL	superfamily_P-loop_NTPase	-	no_errors	GREB1	HGNC	ENSG00000196208				29	0	0.00	17	10	37.04
GREB1L	0	genome.wustl.edu	37	18	19034430	19034430	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	19034430	19034430	G	T	SNP	GREB1L	ENST00000424526	human	ensembl	74_37	+1	known	silent	c.2088	p.L696	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	GREB1L	HGNC	ENSG00000141449	tier1	-	-	54	0	0.00	43	5	10.42
GRIA4	0	genome.wustl.edu	37	11	105850924	105850924	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	105850924	105850924	A	G	SNP	GRIA4	ENST00000533094	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	GRIA4	HGNC	ENSG00000152578	tier1	-	-	31	0	0.00	25	16	39.02
GRID1	0	genome.wustl.edu	37	10	87361805	87361805	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	87361805	87361805	C	T	SNP	GRID1	ENST00000552278	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GRID1	HGNC	ENSG00000182771	tier1	-	-	49	0	0.00	40	24	37.50
GRID2	0	genome.wustl.edu	37	4	93225753	93225754	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	93225753	93225754	AA	-	DEL	GRID2	ENST00000505687	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	GRID2	HGNC	ENSG00000152208	tier1			43	0	0.00	18	21	53.85
GRID2IP	0	genome.wustl.edu	37	7	6550665	6550665	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	6550665	6550665	G	T	SNP	GRID2IP	ENST00000457091	human	ensembl	74_37	-1	putative	missense	c.1429	p.P477T	0.193	NULL	pfam_FH2_Formin,pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_FH2_Formin,pfscan_PDZ	-	no_errors	GRID2IP	HGNC	ENSG00000215045	tier1	-	-	77	0	0.00	41	5	10.87
GRIK2	0	genome.wustl.edu	37	6	102503432	102503432	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	102503432	102503432	A	-	DEL	GRIK2	ENST00000421544	human	ensembl	74_37	+1	known	frame_shift_del	c.2539	p.N849fs	1.000	NULL	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK2	HGNC	ENSG00000164418	tier1			20	0	0.00	5	12	70.59
GRIK3	0	genome.wustl.edu	37	1	37315825	37315825	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	37315825	37315825	G	-	DEL	GRIK3	ENST00000479620	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GRIK3	HGNC	ENSG00000163873	tier1			20	0	0.00	9	5	35.71
GRIK3	0	genome.wustl.edu	37	1	37316015	37316015	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	37316015	37316015	C	A	SNP	GRIK3	ENST00000373091	human	ensembl	74_37	-1	known	missense	c.1223	p.W408L	1.000	superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK3	HGNC	ENSG00000163873	tier1	-	-	76	0	0.00	29	20	40.00
GRIK3	0	genome.wustl.edu	37	1	37319265	37319265	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	37319265	37319265	G	A	SNP	GRIK3	ENST00000373091	human	ensembl	74_37	-1	known	missense	c.1163	p.T388M	0.989	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK3	HGNC	ENSG00000163873	tier1	rs142974275	-	62	0	0.00	29	19	39.58
GRIK3	0	genome.wustl.edu	37	1	37324816	37324816	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	37324816	37324816	C	T	SNP	GRIK3	ENST00000373091	human	ensembl	74_37	-1	known	missense	c.997	p.V333M	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK3	HGNC	ENSG00000163873				31	0	0.00	23	2	8.00
GRIN2A	0	genome.wustl.edu	37	16	9857619	9857619	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	9857619	9857619	G	A	SNP	GRIN2A	ENST00000330684	human	ensembl	74_37	-1	known	missense	c.3782	p.A1261V	0.031	pfam_NMDAR2_C	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2A	HGNC	ENSG00000183454	tier1	-	-	110	0	0.00	59	28	32.18
GRIN2B	0	genome.wustl.edu	37	12	14019063	14019063	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	14019063	14019063	C	T	SNP	GRIN2B	ENST00000609686	human	ensembl	74_37	-1	known	missense	c.80	p.R27H	0.256	NULL	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2B	HGNC	ENSG00000273079	tier1	rs200727145	-	15	0	0.00	3	13	81.25
GRK5	0	genome.wustl.edu	37	10	121189930	121189930	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	121189930	121189930	G	T	SNP	GRK5	ENST00000392870	human	ensembl	74_37	+1	known	nonsense	c.577	p.G193*	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	GRK5	HGNC	ENSG00000198873				96	0	0.00	69	4	5.48
GRM1	0	genome.wustl.edu	37	6	146351349	146351349	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	146351349	146351349	G	A	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	silent	c.696	p.T232	0.019	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822	tier1	-	-	28	0	0.00	9	16	64.00
GRM4	0	genome.wustl.edu	37	6	34003759	34003759	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	34003759	34003759	G	A	SNP	GRM4	ENST00000374181	human	ensembl	74_37	-1	known	nonsense	c.2128	p.Q710*	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_4,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM4	HGNC	ENSG00000124493	tier1	-	-	35	0	0.00	27	21	43.75
GRN	0	genome.wustl.edu	37	17	42428095	42428095	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	42428095	42428095	G	A	SNP	GRN	ENST00000053867	human	ensembl	74_37	+1	known	missense	c.635	p.R212Q	0.000	smart_Granulin	pfam_Granulin,smart_Granulin	-	no_errors	GRN	HGNC	ENSG00000030582	tier1	rs63750787	-	56	0	0.00	53	6	10.17
GTF2F2	0	genome.wustl.edu	37	13	45781549	45781550	+	RNA	DEL	TC	TC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	45781549	45781550	TC	-	DEL	GTF2F2	ENST00000494087	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.825:0.930	-	-	-	no_errors	GTF2F2	HGNC	ENSG00000188342	tier1			62	0	0.00	64	21	24.71
GTF2IRD1	0	genome.wustl.edu	37	7	73961439	73961439	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	73961439	73961439	C	A	SNP	GTF2IRD1	ENST00000265755	human	ensembl	74_37	+1	known	missense	c.1739	p.A580D	1.000	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	-	no_errors	GTF2IRD1	HGNC	ENSG00000006704	tier1	-	-	65	0	0.00	40	21	34.43
GTF3C2	0	genome.wustl.edu	37	2	27551017	27551017	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	27551017	27551017	G	T	SNP	GTF3C2	ENST00000264720	human	ensembl	74_37	-1	known	missense	c.2296	p.P766T	0.313	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	GTF3C2	HGNC	ENSG00000115207	tier1	-	-	44	0	0.00	39	4	9.30
GTPBP2	0	genome.wustl.edu	37	6	43588291	43588292	+	RNA	DEL	TA	TA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	43588291	43588292	TA	-	DEL	GTPBP2	ENST00000476510	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	GTPBP2	HGNC	ENSG00000172432	tier1			11	0	0.00	4	7	63.64
GUCY1A3	0	genome.wustl.edu	37	4	156632032	156632032	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	156632032	156632032	T	C	SNP	GUCY1A3	ENST00000296518	human	ensembl	74_37	+1	known	missense	c.715	p.C239R	0.991	superfamily_NO_sig/Golgi_transp_ligand-bd	pfam_A/G_cyclase,pfam_Haem_no_assoc-bd,pfam_Heme_NO-bd,superfamily_A/G_cyclase,superfamily_NO_sig/Golgi_transp_ligand-bd,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	GUCY1A3	HGNC	ENSG00000164116	tier1	-	-	31	0	0.00	17	10	37.04
GUCY2C	0	genome.wustl.edu	37	12	14832637	14832637	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	14832637	14832637	G	A	SNP	GUCY2C	ENST00000261170	human	ensembl	74_37	-1	known	nonsense	c.784	p.R262*	0.006	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_A/G_cyclase,superfamily_Peripla_BP_I,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2C	HGNC	ENSG00000070019	tier1	-	-	45	0	0.00	59	20	25.32
GUSBP2	0	genome.wustl.edu	37	6	26856819	26856819	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	26856819	26856819	G	A	SNP	GUSBP2	ENST00000463434	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GUSBP2	HGNC	ENSG00000241549	tier1	-	-	117	0	0.00	64	39	37.86
GXYLT1	0	genome.wustl.edu	37	12	42499672	42499672	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	42499672	42499672	T	C	SNP	GXYLT1	ENST00000398675	human	ensembl	74_37	-1	known	missense	c.812	p.N271S	1.000	pfam_Glyco_trans_8	pfam_Glyco_trans_8	-	no_errors	GXYLT1	HGNC	ENSG00000151233	tier1	-	-	29	0	0.00	19	9	32.14
GZF1	0	genome.wustl.edu	37	20	23347639	23347639	+	Splice_Site	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	23347639	23347639	G	T	SNP	GZF1	ENST00000338121	human	ensembl	74_37	+1	known	splice_site	c.1365-1	e2-1	1.000	-	-	-	no_errors	GZF1	HGNC	ENSG00000125812	tier1	-	-	31	0	0.00	26	4	13.33
GZMK	0	genome.wustl.edu	37	5	54326289	54326289	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	54326289	54326289	G	A	SNP	GZMK	ENST00000231009	human	ensembl	74_37	+1	known	silent	c.240	p.V80	1.000	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	GZMK	HGNC	ENSG00000113088	tier1	-	-	109	0	0.00	75	58	43.61
H1FNT	0	genome.wustl.edu	37	12	48723224	48723224	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	48723224	48723224	G	A	SNP	H1FNT	ENST00000335017	human	ensembl	74_37	+1	known	silent	c.150	p.S50	0.000	NULL	NULL	-	no_errors	H1FNT	HGNC	ENSG00000187166	tier1	-	-	30	0	0.00	11	12	52.17
H1FX-AS1	0	genome.wustl.edu	37	3	129036981	129036981	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	129036981	129036981	G	A	SNP	H1FX-AS1	ENST00000383461	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	H1FX-AS1	HGNC	ENSG00000206417	tier1	-	-	34	0	0.00	19	5	20.83
HAP1	0	genome.wustl.edu	37	17	39890494	39890494	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	39890494	39890494	C	T	SNP	HAP1	ENST00000310778	human	ensembl	74_37	-1	known	silent	c.393	p.T131	0.000	pfam_HAP1_N	pfam_HAP1_N	-	no_errors	HAP1	HGNC	ENSG00000173805				13	0	0.00	4	3	42.86
HAPLN4	0	genome.wustl.edu	37	19	19371676	19371676	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	19371676	19371676	C	T	SNP	HAPLN4	ENST00000291481	human	ensembl	74_37	-1	known	missense	c.430	p.E144K	1.000	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Link,pfam_Ig_V-set,superfamily_C-type_lectin_fold,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Link,pfscan_Link,pfscan_Ig-like_dom,prints_Link	-	no_errors	HAPLN4	HGNC	ENSG00000187664	tier1	-	-	60	0	0.00	25	21	45.65
HAUS6	0	genome.wustl.edu	37	9	19058188	19058188	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	19058188	19058188	G	A	SNP	HAUS6	ENST00000380502	human	ensembl	74_37	-1	known	silent	c.2577	p.P859	0.224	NULL	NULL	-	no_errors	HAUS6	HGNC	ENSG00000147874	tier1	rs147153475	-	98	0	0.00	69	32	31.68
HAX1	0	genome.wustl.edu	37	1	154246356	154246357	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	154246356	154246357	-	G	INS	HAX1	ENST00000483970	human	ensembl	74_37	+1	known	frame_shift_ins	c.447_448	p.V151fs	0.892:0.777	pirsf_HS1--assoc_X-1	pirsf_HS1--assoc_X-1	-	no_errors	HAX1	HGNC	ENSG00000143575	tier1			34	0	0.00	38	8	17.39
HCN1	0	genome.wustl.edu	37	5	45262495	45262495	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	45262495	45262495	G	A	SNP	HCN1	ENST00000303230	human	ensembl	74_37	-1	known	missense	c.2201	p.P734L	0.004	NULL	pfam_Ion_trans_N,pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	-	no_errors	HCN1	HGNC	ENSG00000164588	tier1	-	-	52	0	0.00	32	60	65.22
HCN1	0	genome.wustl.edu	37	5	45267271	45267271	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	45267271	45267271	T	A	SNP	HCN1	ENST00000303230	human	ensembl	74_37	-1	known	missense	c.1703	p.N568I	1.000	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	pfam_Ion_trans_N,pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	-	no_errors	HCN1	HGNC	ENSG00000164588	tier1	-	-	90	0	0.00	118	34	22.37
HDAC11	0	genome.wustl.edu	37	3	13538267	13538268	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	13538267	13538268	-	C	INS	HDAC11	ENST00000295757	human	ensembl	74_37	+1	known	frame_shift_ins	c.284_285	p.V98fs	1.000:1.000	pfam_His_deacetylse_dom	pfam_His_deacetylse_dom,prints_His_deacetylse	-	no_errors	HDAC11	HGNC	ENSG00000163517	tier1			63	0	0.00	47	25	34.72
HDAC3	0	genome.wustl.edu	37	5	141005807	141005807	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	141005807	141005807	C	T	SNP	HDAC3	ENST00000305264	human	ensembl	74_37	-1	known	missense	c.874	p.V292M	1.000	pfam_His_deacetylse_dom,pirsf_His_deacetylse_1	pfam_His_deacetylse_dom,pirsf_His_deacetylse_1,prints_His_deacetylse_1,prints_His_deacetylse	-	no_errors	HDAC3	HGNC	ENSG00000171720	tier1	-	-	113	0	0.00	51	56	52.34
HDAC4	0	genome.wustl.edu	37	2	240016733	240016733	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	240016733	240016733	G	T	SNP	HDAC4	ENST00000345617	human	ensembl	74_37	-1	known	missense	c.2238	p.F746L	0.191	pfam_His_deacetylse_dom,pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pfam_Arb2_domain,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC4	HGNC	ENSG00000068024	tier1	-	-	83	0	0.00	67	7	9.46
HDAC4	0	genome.wustl.edu	37	2	240036792	240036792	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	240036792	240036792	G	A	SNP	HDAC4	ENST00000345617	human	ensembl	74_37	-1	known	missense	c.1733	p.P578L	0.502	pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pfam_Arb2_domain,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC4	HGNC	ENSG00000068024	tier1	rs201187772	-	97	0	0.00	40	23	36.51
HDAC6	0	genome.wustl.edu	37	X	48681613	48681613	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	48681613	48681613	G	T	SNP	HDAC6	ENST00000444343	human	ensembl	74_37	+1	known	missense	c.2846	p.G949V	0.004	NULL	pfam_His_deacetylse_dom,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,prints_His_deacetylse	-	no_errors	HDAC6	HGNC	ENSG00000094631				79	0	0.00	67	4	5.63
HDAC9	0	genome.wustl.edu	37	7	18869172	18869172	+	Splice_Site	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	18869172	18869172	G	T	SNP	HDAC9	ENST00000441542	human	ensembl	74_37	+1	known	splice_site	c.2466+1	e18+1	1.000	-	-	-	no_errors	HDAC9	HGNC	ENSG00000048052				27	0	0.00	22	2	8.33
HDGF	0	genome.wustl.edu	37	1	156713319	156713319	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	156713319	156713319	G	A	SNP	HDGF	ENST00000477306	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	HDGF	HGNC	ENSG00000143321	tier1	-	-	46	0	0.00	48	22	31.43
HDLBP	0	genome.wustl.edu	37	2	242179021	242179021	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	242179021	242179021	T	C	SNP	HDLBP	ENST00000310931	human	ensembl	74_37	-1	known	missense	c.2606	p.D869G	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	HDLBP	HGNC	ENSG00000115677	tier1	-	-	31	0	0.00	18	13	41.94
HEATR5A	0	genome.wustl.edu	37	14	31852855	31852855	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	31852855	31852855	G	A	SNP	HEATR5A	ENST00000389961	human	ensembl	74_37	-1	known	missense	c.1450	p.R484C	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR5A	HGNC	ENSG00000129493	tier1	-	-	41	0	0.00	24	18	42.86
HEATR5B	0	genome.wustl.edu	37	2	37208635	37208635	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	37208635	37208635	A	-	DEL	HEATR5B	ENST00000233099	human	ensembl	74_37	-1	known	frame_shift_del	c.6214	p.*2072fs	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	HEATR5B	HGNC	ENSG00000008869	tier1			28	0	0.00	19	13	40.62
HECW2	0	genome.wustl.edu	37	2	197184627	197184627	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	197184627	197184627	A	G	SNP	HECW2	ENST00000260983	human	ensembl	74_37	-1	known	silent	c.987	p.D329	1.000	NULL	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	HECW2	HGNC	ENSG00000138411				18	0	0.00	12	9	42.86
HEG1	0	genome.wustl.edu	37	3	124733606	124733606	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	124733606	124733606	G	A	SNP	HEG1	ENST00000477536	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	HEG1	HGNC	ENSG00000173706	tier1	-	-	33	0	0.00	19	18	47.37
HELLS	0	genome.wustl.edu	37	10	96352051	96352051	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	96352051	96352051	A	-	DEL	HELLS	ENST00000371332	human	ensembl	74_37	+1	known	frame_shift_del	c.1971	p.R660fs	0.958	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HELLS	HGNC	ENSG00000119969	tier1			32	0	0.00	40	17	29.82
HEPH	0	genome.wustl.edu	37	X	65393488	65393489	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	65393488	65393489	-	G	INS	HEPH	ENST00000519389	human	ensembl	74_37	+1	known	frame_shift_ins	c.632_633	p.S214fs	0.997:0.835	pfam_Cu-oxidase_3,superfamily_Cupredoxin	pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Cupredoxin	-	no_errors	HEPH	HGNC	ENSG00000089472	tier1			34	0	0.00	13	13	50.00
HEPHL1	0	genome.wustl.edu	37	11	93844770	93844770	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	93844770	93844770	C	T	SNP	HEPHL1	ENST00000315765	human	ensembl	74_37	+1	known	silent	c.3276	p.N1092	0.004	NULL	pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Cupredoxin	-	no_errors	HEPHL1	HGNC	ENSG00000181333	tier1	-	-	19	0	0.00	10	13	56.52
HERC2	0	genome.wustl.edu	37	15	28447658	28447658	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	28447658	28447658	C	T	SNP	HERC2	ENST00000261609	human	ensembl	74_37	-1	known	missense	c.7315	p.A2439T	0.844	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_CPH_domain,pfam_Mib_Herc2,pfam_Cyt_B5-like_heme/steroid-bd,pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_Galactose-bd-like,superfamily_Cyt_B5-like_heme/steroid-bd,superfamily_UBA-like,superfamily_CUB_dom,smart_Beta-propeller_rpt_TECPR,smart_Znf_ZZ,smart_HECT,pfscan_HECT,pfscan_Znf_ZZ,pfscan_Reg_chr_condens,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Reg_chr_condens	-	no_errors	HERC2	HGNC	ENSG00000128731	tier1	-	-	17	0	0.00	14	9	39.13
HERC2P2	0	genome.wustl.edu	37	15	23311345	23311345	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	23311345	23311345	G	A	SNP	HERC2P2	ENST00000559248	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HERC2P2	HGNC	ENSG00000140181	tier1	-	-	27	0	0.00	6	16	72.73
HERC2P8	0	genome.wustl.edu	37	16	33106788	33106788	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	33106788	33106788	G	A	SNP	HERC2P8	ENST00000564795	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.759	-	-	-	no_errors	HERC2P8	HGNC	ENSG00000261599	tier1	-	-	18	0	0.00	14	6	30.00
HERC4	0	genome.wustl.edu	37	10	69716603	69716604	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	69716603	69716604	AA	-	DEL	HERC4	ENST00000480158	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	HERC4	HGNC	ENSG00000148634	tier1			29	0	0.00	7	10	58.82
HERPUD2	0	genome.wustl.edu	37	7	35675005	35675005	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	35675005	35675005	C	T	SNP	HERPUD2	ENST00000311350	human	ensembl	74_37	-1	known	silent	c.681	p.Q227	0.998	NULL	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	HERPUD2	HGNC	ENSG00000122557	tier1	-	-	73	0	0.00	43	41	48.81
HFE	0	genome.wustl.edu	37	6	26093113	26093113	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	26093113	26093113	C	-	DEL	HFE	ENST00000357618	human	ensembl	74_37	+1	known	frame_shift_del	c.817	p.P274fs	0.000	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HFE	HGNC	ENSG00000010704	tier1			98	0	0.00	21	41	66.13
HFE	0	genome.wustl.edu	37	6	26093117	26093117	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	26093117	26093117	C	T	SNP	HFE	ENST00000357618	human	ensembl	74_37	+1	known	missense	c.821	p.P274L	0.018	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HFE	HGNC	ENSG00000010704				99	0	0.00	56	5	8.20
HGFAC	0	genome.wustl.edu	37	4	3443798	3443800	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	3443798	3443800	CTG	-	DEL	HGFAC	ENST00000382774	human	ensembl	74_37	+1	known	in_frame_del	c.70_72	p.L27in_frame_del	0.997:0.997:0.998	pirsf_Coagulation_fac_XIIa/HGFA	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EG-like_dom,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGFAC	HGNC	ENSG00000109758	tier1			48	0	0.00	25	3	10.71
HGFAC	0	genome.wustl.edu	37	4	3444594	3444594	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	3444594	3444594	C	0	DEL	HGFAC	ENST00000382774	human	ensembl	74_37	+1	known	frame_shift_del	c.253	p.P86fs	0.000	pirsf_Coagulation_fac_XIIa/HGFA	pirsf_Coagulation_fac_XIIa/HGFA,pfam_Peptidase_S1,pfam_Kringle,pfam_FN_type2_col-bd,pfam_Fibronectin_type1,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_EG-like_dom,smart_Fibronectin_type1,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HGFAC	HGNC	ENSG00000109758				24	0	0.00	11	5	31.25
HHIP	0	genome.wustl.edu	37	4	145658978	145658978	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	145658978	145658978	A	-	DEL	HHIP	ENST00000296575	human	ensembl	74_37	+1	known	frame_shift_del	c.1972	p.G660fs	1.000	smart_EG-like_dom,pfscan_EG-like_dom	pfam_Folate_rcpt-like,superfamily_Quinoprot_gluc/sorb_DH,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	HHIP	HGNC	ENSG00000164161	tier1			68	0	0.00	36	26	41.94
HIF1A	0	genome.wustl.edu	37	14	62162351	62162351	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	62162351	62162351	C	T	SNP	HIF1A	ENST00000553999	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	HIF1A	HGNC	ENSG00000100644	tier1	-	-	17	0	0.00	4	5	55.56
HIF1A	0	genome.wustl.edu	37	14	62207881	62207881	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	62207881	62207881	G	A	SNP	HIF1A	ENST00000539097	human	ensembl	74_37	+1	known	missense	c.2140	p.V714M	0.810	NULL	pfam_PAS_fold_3,pfam_HIF-1_TAD_C,pfam_HIF_alpha_subunit,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_HIF-1_alpha,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	HIF1A	HGNC	ENSG00000100644	tier1	-	-	25	0	0.00	11	16	59.26
HILPDA	0	genome.wustl.edu	37	7	128097964	128097964	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	128097964	128097964	A	-	DEL	HILPDA	ENST00000466473	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	HILPDA	HGNC	ENSG00000135245	tier1			25	0	0.00	8	9	52.94
HILS1	0	genome.wustl.edu	37	17	48258285	48258288	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	48258285	48258288	AAAA	-	DEL	HILS1	ENST00000504307	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000:0.000	-	-	-	no_errors	HILS1	HGNC	ENSG00000188662	tier1			45	0	0.00	21	13	38.24
HIPK1	0	genome.wustl.edu	37	1	114499264	114499264	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	114499264	114499264	G	T	SNP	HIPK1	ENST00000369558	human	ensembl	74_37	+1	known	missense	c.1423	p.D475Y	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK1	HGNC	ENSG00000163349	tier1	-	-	46	0	0.00	48	4	7.69
HIPK4	0	genome.wustl.edu	37	19	40895566	40895566	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	40895566	40895566	C	T	SNP	HIPK4	ENST00000291823	human	ensembl	74_37	-1	known	missense	c.244	p.A82T	0.989	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK4	HGNC	ENSG00000160396	tier1	-	-	47	0	0.00	37	20	35.09
HIST1H2AD	0	genome.wustl.edu	37	6	26199227	26199228	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	26199227	26199228	-	G	INS	HIST1H2AD	ENST00000341023	human	ensembl	74_37	-1	known	frame_shift_ins	c.245_244	p.R82fs	1.000:1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AD	HGNC	ENSG00000196866	tier1			124	0	0.00	43	93	68.38
HIST1H2BN	0	genome.wustl.edu	37	6	27806814	27806814	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	27806814	27806814	C	A	SNP	HIST1H2BN	ENST00000396980	human	ensembl	74_37	+1	known	silent	c.375	p.S125	1.000	superfamily_Histone-fold	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BN	HGNC	ENSG00000233822				90	0	0.00	65	4	5.80
HIVEP3	0	genome.wustl.edu	37	1	42046841	42046841	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	42046841	42046841	G	A	SNP	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	missense	c.3628	p.P1210S	0.996	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124	tier1	-	-	55	0	0.00	46	4	8.00
HIVEP3	0	genome.wustl.edu	37	1	42048989	42048989	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	42048989	42048989	G	A	SNP	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	missense	c.1480	p.R494C	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124	tier1	-	-	60	0	0.00	81	10	10.99
HIVEP3	0	genome.wustl.edu	37	1	42049670	42049670	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	42049670	42049670	G	A	SNP	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	missense	c.799	p.R267W	0.992	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124	tier1	-	-	30	0	0.00	14	10	41.67
HLA-DMB	0	genome.wustl.edu	37	6	32906673	32906673	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	32906673	32906673	T	C	SNP	HLA-DMB	ENST00000418107	human	ensembl	74_37	-1	known	missense	c.125	p.Y42C	0.273	pfam_MHC_II_b_N,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N	pfam_Ig_C1-set,pfam_MHC_II_b_N,pfam_CD80_C2-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	HLA-DMB	HGNC	ENSG00000242574	tier1	-	-	77	0	0.00	15	39	72.22
HLA-F	0	genome.wustl.edu	37	6	29694802	29694803	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	29694802	29694803	-	T	INS	HLA-F	ENST00000259951	human	ensembl	74_37	+1	known	frame_shift_ins	c.1179_1180	p.L395fs	1.000:1.000	NULL	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-F	HGNC	ENSG00000204642	tier1			67	0	0.00	68	7	9.33
HLA-J	0	genome.wustl.edu	37	6	29976018	29976018	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	29976018	29976018	C	T	SNP	HLA-J	ENST00000462773	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.693	-	-	-	no_errors	HLA-J	HGNC	ENSG00000204622	tier1	-	-	65	0	0.00	40	23	36.51
HLTF	0	genome.wustl.edu	37	3	148766718	148766718	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	148766718	148766718	C	T	SNP	HLTF	ENST00000310053	human	ensembl	74_37	-1	known	missense	c.1688	p.R563Q	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_HIP116_Rad5p_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_HIP116_Rad5p_N,smart_Helicase_ATP-bd,smart_Znf_RING,smart_Helicase_C,pfscan_Znf_RING,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HLTF	HGNC	ENSG00000071794	tier1	-	-	83	0	0.00	72	4	5.26
HLX	0	genome.wustl.edu	37	1	221054587	221054587	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	221054587	221054587	G	T	SNP	HLX	ENST00000366903	human	ensembl	74_37	+1	known	missense	c.644	p.G215V	0.765	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	HLX	HGNC	ENSG00000136630	tier1	-	-	70	0	0.00	85	6	6.52
HMCN1	0	genome.wustl.edu	37	1	185962483	185962483	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	185962483	185962483	G	T	SNP	HMCN1	ENST00000485744	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	44	0	0.00	67	4	5.63
HMCN1	0	genome.wustl.edu	37	1	186083133	186083133	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	186083133	186083133	C	-	DEL	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	frame_shift_del	c.11154	p.Q3720fs	0.991	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1			48	0	0.00	32	13	28.89
HMGA1	0	genome.wustl.edu	37	6	34211248	34211250	+	In_Frame_Del	DEL	ACC	ACC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	ACC	ACC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	34211248	34211250	ACC	-	DEL	HMGA1	ENST00000311487	human	ensembl	74_37	+1	known	in_frame_del	c.223_225	p.T78in_frame_del	1.000:1.000:1.000	prints_HMGI/HMGY	smart_AT_hook_DNA-bd_motif,prints_HMGI/HMGY,prints_AT_hook-like	-	no_errors	HMGA1	HGNC	ENSG00000137309	tier1			65	0	0.00	44	32	42.11
HMGB1	0	genome.wustl.edu	37	13	31035515	31035515	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	31035515	31035515	T	A	SNP	HMGB1	ENST00000339872	human	ensembl	74_37	-1	known	missense	c.627	p.E209D	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	HMGB1	HGNC	ENSG00000189403	tier1	-	-	30	0	0.00	47	11	18.97
HMGB1	0	genome.wustl.edu	37	13	31037600	31037600	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	31037600	31037600	T	-	DEL	HMGB1	ENST00000468384	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	HMGB1	HGNC	ENSG00000189403	tier1			44	0	0.00	47	21	30.88
HMGB2	0	genome.wustl.edu	37	4	174254086	174254086	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	174254086	174254086	G	A	SNP	HMGB2	ENST00000296503	human	ensembl	74_37	-1	known	silent	c.357	p.G119	0.942	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	HMGB2	HGNC	ENSG00000164104	tier1	-	-	53	0	0.00	49	20	28.99
HMGN2P46	0	genome.wustl.edu	37	15	45848231	45848234	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	45848231	45848234	TTTT	-	DEL	HMGN2P46	ENST00000313559	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997:0.996:0.997:0.996	-	-	-	no_errors	HMGN2P46	HGNC	ENSG00000179362	tier1			14	0	0.00	16	12	42.86
HMHA1	0	genome.wustl.edu	37	19	1080107	1080107	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	1080107	1080107	G	A	SNP	HMHA1	ENST00000313093	human	ensembl	74_37	+1	known	missense	c.1693	p.A565T	0.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448	tier1	-	-	52	0	0.00	32	19	37.25
HMOX1	0	genome.wustl.edu	37	22	35782901	35782901	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	35782901	35782901	G	A	SNP	HMOX1	ENST00000216117	human	ensembl	74_37	+1	known	missense	c.368	p.R123H	0.000	pfam_Haem_Oase-like,superfamily_Haem_Oase-like_multi-hlx,pirsf_Haem_Oase	pfam_Haem_Oase-like,superfamily_Haem_Oase-like_multi-hlx,pirsf_Haem_Oase,prints_Haem_Oase	-	no_errors	HMOX1	HGNC	ENSG00000100292	tier1	-	-	53	0	0.00	20	10	33.33
HMX2	0	genome.wustl.edu	37	10	124907930	124907930	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	124907930	124907930	G	A	SNP	HMX2	ENST00000339992	human	ensembl	74_37	+1	known	silent	c.36	p.P12	0.963	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HMX2	HGNC	ENSG00000188816	tier1	-	-	96	0	0.00	33	38	53.52
HNRNPCL1	0	genome.wustl.edu	37	1	12908012	12908012	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	12908012	12908012	G	A	SNP	HNRNPCL1	ENST00000317869	human	ensembl	74_37	-1	known	missense	c.131	p.A44V	1.000	pfam_RRM_dom,smart_RRM_dom,pirsf_hnRNP_C_Raly,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pirsf_hnRNP_C_Raly,pfscan_RRM_dom	-	no_errors	HNRNPCL1	HGNC	ENSG00000179172	tier1	-	-	309	0	0.00	240	24	9.09
HNRNPKP3	0	genome.wustl.edu	37	11	43283606	43283607	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	43283606	43283607	AA	-	DEL	HNRNPKP3	ENST00000511537	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.986:0.995	-	-	-	no_errors	HNRNPKP3	HGNC	ENSG00000251557	tier1			8	0	0.00	3	3	50.00
HNRNPM	0	genome.wustl.edu	37	19	8550769	8550769	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	8550769	8550769	T	C	SNP	HNRNPM	ENST00000325495	human	ensembl	74_37	+1	known	missense	c.1457	p.M486T	1.000	NULL	pfam_RRM_dom,pfam_HnRNP_M_PY-NLS,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPM	HGNC	ENSG00000099783	tier1	-	-	28	0	0.00	17	7	29.17
HNRNPUL1	0	genome.wustl.edu	37	19	41808818	41808818	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	41808818	41808818	G	-	DEL	HNRNPUL1	ENST00000392006	human	ensembl	74_37	+1	known	frame_shift_del	c.1936	p.G647fs	0.979	NULL	pfam_SPRY_rcpt,pfam_SAP_dom,superfamily_ConA-like_lec_gl_sf,superfamily_P-loop_NTPase,smart_SAP_dom,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_SAP_dom	-	no_errors	HNRNPUL1	HGNC	ENSG00000105323	tier1			24	0	0.00	10	6	37.50
HOMEZ	0	genome.wustl.edu	37	14	23745310	23745310	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	23745310	23745310	A	-	DEL	HOMEZ	ENST00000431326	human	ensembl	74_37	-1	known	frame_shift_del	c.1133	p.L378fs	1.000	superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HOMEZ	HGNC	ENSG00000215271	tier1			76	0	0.00	74	41	35.65
HOOK3	0	genome.wustl.edu	37	8	42814435	42814435	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	42814435	42814435	G	A	SNP	HOOK3	ENST00000307602	human	ensembl	74_37	+1	known	missense	c.593	p.R198K	1.000	pfam_Hook-related_fam	pfam_Hook-related_fam,superfamily_t-SNARE	-	no_errors	HOOK3	HGNC	ENSG00000168172	tier1	-	-	21	0	0.00	27	7	20.59
HOXA-AS3	0	genome.wustl.edu	37	7	27193435	27193435	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	27193435	27193435	A	G	SNP	HOXA-AS3	ENST00000518947	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.036	-	-	-	no_errors	HOXA-AS3	HGNC	ENSG00000254369	tier1	-	-	54	0	0.00	32	28	46.67
HOXA-AS3	0	genome.wustl.edu	37	7	27194267	27194267	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	27194267	27194267	G	-	DEL	HOXA-AS3	ENST00000518947	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HOXA-AS3	HGNC	ENSG00000254369	tier1			36	0	0.00	30	8	21.05
HOXD8	0	genome.wustl.edu	37	2	176995458	176995458	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	176995458	176995458	C	-	DEL	HOXD8	ENST00000313173	human	ensembl	74_37	+1	known	frame_shift_del	c.364	p.C124fs	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	HOXD8	HGNC	ENSG00000175879	tier1			17	0	0.00	6	3	33.33
HOXD8	0	genome.wustl.edu	37	2	176995458	176995458	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	176995458	176995458	C	T	SNP	HOXD8	ENST00000313173	human	ensembl	74_37	+1	known	missense	c.364	p.P122S	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	HOXD8	HGNC	ENSG00000175879				17	0	0.00	4	2	22.22
HP1BP3	0	genome.wustl.edu	37	1	21106855	21106855	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	21106855	21106855	C	T	SNP	HP1BP3	ENST00000312239	human	ensembl	74_37	-1	known	missense	c.79	p.A27T	1.000	NULL	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15	-	no_errors	HP1BP3	HGNC	ENSG00000127483	tier1	rs142958960	-	61	0	0.00	45	31	39.74
HPCAL4	0	genome.wustl.edu	37	1	40148347	40148347	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	40148347	40148347	G	A	SNP	HPCAL4	ENST00000372844	human	ensembl	74_37	-1	known	missense	c.437	p.T146M	1.000	pfscan_EF_hand_dom,prints_Recoverin	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	HPCAL4	HGNC	ENSG00000116983	tier1	-	-	45	0	0.00	23	18	43.90
HPCAL4	0	genome.wustl.edu	37	1	40150207	40150207	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	40150207	40150207	G	T	SNP	HPCAL4	ENST00000372844	human	ensembl	74_37	-1	known	missense	c.69	p.S23R	1.000	prints_Recoverin	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	HPCAL4	HGNC	ENSG00000116983	tier1	-	-	72	0	0.00	55	6	9.84
HPDL	0	genome.wustl.edu	37	1	45793177	45793177	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	45793177	45793177	C	T	SNP	HPDL	ENST00000334815	human	ensembl	74_37	+1	known	silent	c.357	p.A119	0.055	pirsf_4OHPhenylPyrv_dOase	pirsf_4OHPhenylPyrv_dOase	-	no_errors	HPDL	HGNC	ENSG00000186603				20	0	0.00	11	3	21.43
HPS6	0	genome.wustl.edu	37	10	103826768	103826768	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	103826768	103826768	C	A	SNP	HPS6	ENST00000299238	human	ensembl	74_37	+1	known	missense	c.1537	p.L513I	0.292	pirsf_BLOC-2_complex_Hps6_subunit	pirsf_BLOC-2_complex_Hps6_subunit	-	no_errors	HPS6	HGNC	ENSG00000166189	tier1	-	-	56	0	0.00	32	14	30.43
HPX	0	genome.wustl.edu	37	11	6461398	6461398	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	6461398	6461398	G	T	SNP	HPX	ENST00000265983	human	ensembl	74_37	-1	known	silent	c.333	p.I111	0.999	pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat,pirsf_Hemopexin_chordata	pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat,pirsf_Hemopexin_chordata	-	no_errors	HPX	HGNC	ENSG00000110169	tier1	-	-	68	0	0.00	44	4	8.33
HRH4	0	genome.wustl.edu	37	18	22057444	22057444	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	22057444	22057444	G	A	SNP	HRH4	ENST00000256906	human	ensembl	74_37	+1	known	missense	c.1091	p.R364H	0.374	prints_Histamine_H4_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Histamine_H4_rcpt,prints_GPCR_Rhodpsn	-	no_errors	HRH4	HGNC	ENSG00000134489	tier1	rs149820026	-	58	0	0.00	37	22	37.29
HRNR	0	genome.wustl.edu	37	1	152187631	152187631	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	152187631	152187631	G	A	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	silent	c.6474	p.R2158	0.003	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915	tier1	-	-	430	0	0.00	413	25	5.68
HRNR	0	genome.wustl.edu	37	1	152189041	152189041	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	152189041	152189041	G	A	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	silent	c.5064	p.R1688	0.003	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915	tier1	-	-	80	0	0.00	60	8	11.76
HRNR	0	genome.wustl.edu	37	1	152192466	152192466	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	152192466	152192466	G	A	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	nonsense	c.1639	p.R547*	0.004	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915	tier1	rs142288299	-	154	0	0.00	85	48	36.09
HSD17B1	0	genome.wustl.edu	37	17	40706467	40706469	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	40706467	40706469	AGA	-	DEL	HSD17B1	ENST00000585807	human	ensembl	74_37	+1	known	in_frame_del	c.584_586	p.K196in_frame_del	0.189:0.353:0.739	pirsf_17beta_DH	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pirsf_17beta_DH,prints_Glc/ribitol_DH,prints_DHB_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	HSD17B1	HGNC	ENSG00000108786	tier1			72	0	0.00	40	20	33.33
HSD17B4	0	genome.wustl.edu	37	5	118809676	118809678	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	118809676	118809678	AAG	-	DEL	HSD17B4	ENST00000256216	human	ensembl	74_37	+1	known	in_frame_del	c.186_188	p.R65in_frame_del	1.000:1.000:1.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,smart_PKS/FAS_KR	pfam_MaoC_dom,pfam_DH_sc/Rdtase_SDR,pfam_SCP2_sterol-bd_dom,pfam_PKS_KR,superfamily_SCP2_sterol-bd_dom,smart_PKS/FAS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	HSD17B4	HGNC	ENSG00000133835	tier1			83	0	0.00	61	26	29.89
HSD17B4	0	genome.wustl.edu	37	5	118865647	118865647	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	118865647	118865647	C	T	SNP	HSD17B4	ENST00000256216	human	ensembl	74_37	+1	known	missense	c.1826	p.S609F	0.766	NULL	pfam_MaoC_dom,pfam_DH_sc/Rdtase_SDR,pfam_SCP2_sterol-bd_dom,pfam_PKS_KR,superfamily_SCP2_sterol-bd_dom,smart_PKS/FAS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	HSD17B4	HGNC	ENSG00000133835	tier1	-	-	39	0	0.00	24	22	47.83
HSD3B1	0	genome.wustl.edu	37	1	120054190	120054190	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	120054190	120054190	G	T	SNP	HSD3B1	ENST00000235547	human	ensembl	74_37	+1	known	missense	c.216	p.K72N	0.132	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_Male_sterile_NAD-bd,pfam_Polysac_CapD-like,pfam_DH_sc/Rdtase_SDR,pfam_dTDP_dehydrorham_reduct,pfam_PKS_KR,pfam_NmrA	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_Male_sterile_NAD-bd,pfam_Polysac_CapD-like,pfam_DH_sc/Rdtase_SDR,pfam_dTDP_dehydrorham_reduct,pfam_PKS_KR,pfam_NmrA	-	no_errors	HSD3B1	HGNC	ENSG00000203857	tier1	-	-	102	0	0.00	65	4	5.80
HSPA12A	0	genome.wustl.edu	37	10	118434562	118434562	+	Silent	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	118434562	118434562	A	C	SNP	HSPA12A	ENST00000369209	human	ensembl	74_37	-1	known	silent	c.1758	p.R586	0.748	NULL	NULL	-	no_errors	HSPA12A	HGNC	ENSG00000165868	tier1	-	-	40	0	0.00	11	7	38.89
HSPA2	0	genome.wustl.edu	37	14	65009180	65009180	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	65009180	65009180	G	A	SNP	HSPA2	ENST00000247207	human	ensembl	74_37	+1	known	missense	c.1613	p.R538Q	0.987	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA2	HGNC	ENSG00000126803	tier1	-	-	18	0	0.00	7	11	61.11
HSPBP1	0	genome.wustl.edu	37	19	55785874	55785874	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	55785874	55785874	C	T	SNP	HSPBP1	ENST00000255631	human	ensembl	74_37	-1	known	missense	c.532	p.A178T	0.807	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HSPBP1	HGNC	ENSG00000133265	tier1	-	-	20	0	0.00	20	4	16.67
HSPG2	0	genome.wustl.edu	37	1	22149323	22149323	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	22149323	22149323	T	-	DEL	HSPG2	ENST00000486901	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HSPG2	HGNC	ENSG00000142798	tier1			38	0	0.00	16	11	40.74
HSPG2	0	genome.wustl.edu	37	1	22168102	22168102	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	22168102	22168102	G	A	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	silent	c.9258	p.H3086	0.003	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798	tier1	rs142555110	-	158	0	0.00	77	40	34.19
HSPH1	0	genome.wustl.edu	37	13	31722127	31722127	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	31722127	31722127	G	T	SNP	HSPH1	ENST00000445273	human	ensembl	74_37	-1	known	silent	c.1353	p.P451	0.037	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPH1	HGNC	ENSG00000120694	tier1	-	-	33	0	0.00	56	8	12.50
HTATIP2	0	genome.wustl.edu	37	11	20388803	20388803	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	20388803	20388803	T	C	SNP	HTATIP2	ENST00000419348	human	ensembl	74_37	+1	known	silent	c.381	p.G127	0.995	pfam_Semialdehyde_DH_NAD-bd	pfam_Semialdehyde_DH_NAD-bd	-	no_errors	HTATIP2	HGNC	ENSG00000109854	tier1	-	-	53	0	0.00	48	47	48.96
HTR3D	0	genome.wustl.edu	37	3	183749570	183749570	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	183749570	183749570	G	T	SNP	HTR3D	ENST00000428798	human	ensembl	74_37	+1	known	missense	c.41	p.G14V	0.000	NULL	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd	-	no_errors	HTR3D	HGNC	ENSG00000186090	tier1	-	-	38	0	0.00	39	4	9.30
HTRA3	0	genome.wustl.edu	37	4	8293255	8293255	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	8293255	8293255	C	T	SNP	HTRA3	ENST00000307358	human	ensembl	74_37	+1	known	silent	c.867	p.S289	0.147	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom	pfam_Peptidase_S1,pfam_Kazal_dom,pfam_PDZ,superfamily_Trypsin-like_Pept_dom,superfamily_PDZ,smart_IGFBP-like,smart_Kazal_dom,smart_PDZ,pfscan_PDZ,prints_Peptidase_S1C	-	no_errors	HTRA3	HGNC	ENSG00000170801	tier1	-	-	32	0	0.00	11	11	50.00
HTT	0	genome.wustl.edu	37	4	3127292	3127294	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	3127292	3127294	AGA	-	DEL	HTT	ENST00000355072	human	ensembl	74_37	+1	known	in_frame_del	c.1338_1340	p.E449in_frame_del	0.996:1.000:1.000	superfamily_ARM-type_fold	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386	tier1			75	0	0.00	32	23	41.82
HTT	0	genome.wustl.edu	37	4	3158915	3158915	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	3158915	3158915	G	A	SNP	HTT	ENST00000355072	human	ensembl	74_37	+1	known	missense	c.3742	p.A1248T	1.000	NULL	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386	tier1	-	-	59	0	0.00	45	16	26.23
HUWE1	0	genome.wustl.edu	37	X	53577971	53577971	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	53577971	53577971	C	A	SNP	HUWE1	ENST00000262854	human	ensembl	74_37	-1	known	missense	c.9276	p.E3092D	1.000	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/Ts_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758	tier1	-	-	25	0	0.00	6	13	68.42
HUWE1	0	genome.wustl.edu	37	X	53587251	53587251	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	53587251	53587251	C	T	SNP	HUWE1	ENST00000262854	human	ensembl	74_37	-1	known	missense	c.7634	p.R2545H	1.000	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/Ts_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758	tier1	-	-	38	0	0.00	4	24	85.71
HVCN1	0	genome.wustl.edu	37	12	111099112	111099112	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	111099112	111099112	C	G	SNP	HVCN1	ENST00000242607	human	ensembl	74_37	-1	known	missense	c.163	p.E55Q	0.018	NULL	pfam_Ion_trans_dom	-	no_errors	HVCN1	HGNC	ENSG00000122986	tier1	-	-	148	0	0.00	96	45	31.91
HYAL4	0	genome.wustl.edu	37	7	123509154	123509154	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	123509154	123509154	G	A	SNP	HYAL4	ENST00000223026	human	ensembl	74_37	+1	known	missense	c.827	p.R276H	0.044	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Hyaluronidase	-	no_errors	HYAL4	HGNC	ENSG00000106302	tier1	-	-	35	0	0.00	27	11	28.95
HYDIN	0	genome.wustl.edu	37	16	70889081	70889081	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	70889081	70889081	G	A	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	silent	c.12393	p.S4131	0.701	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	26	0	0.00	8	13	61.90
HYDIN	0	genome.wustl.edu	37	16	71220808	71220808	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	71220808	71220808	T	-	DEL	HYDIN	ENST00000538248	human	ensembl	74_37	-1	known	frame_shift_del	c.72	p.K24fs	0.169	NULL	superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1			25	0	0.00	17	7	29.17
HYDIN	0	genome.wustl.edu	37	16	70934983	70934983	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	70934983	70934983	G	0	DEL	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	frame_shift_del	c.8972	p.P2991fs	0.097	superfamily_PapD-like	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423				60	0	0.00	41	8	16.33
HYDIN	0	genome.wustl.edu	37	16	71052314	71052314	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	71052314	71052314	T	0	DEL	HYDIN	ENST00000448089	human	ensembl	74_37	-1	known	frame_shift_del	c.3218	p.N1073fs	0.002	NULL	superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423				11	0	0.00	3	4	57.14
IARS	0	genome.wustl.edu	37	9	95022503	95022503	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	95022503	95022503	T	-	DEL	IARS	ENST00000375643	human	ensembl	74_37	-1	known	frame_shift_del	c.1801	p.M601fs	1.000	pfam_aa-tRNA-synth_Ia,pfam_Methionyl/Leucyl_tRNA_Synth,tigrfam_Ile-tRNA-ligase	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,prints_Ile-tRNA-ligase,tigrfam_Ile-tRNA-ligase	-	no_errors	IARS	HGNC	ENSG00000196305	tier1			151	0	0.00	106	41	27.89
IBA57-AS1	0	genome.wustl.edu	37	1	228351834	228351834	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	228351834	228351834	A	T	SNP	IBA57-AS1	ENST00000366713	human	ensembl	74_37	-1	known	missense	c.317	p.I106N	0.004	NULL	NULL	-	no_errors	IBA57-AS1	HGNC	ENSG00000203684	tier1	-	-	32	0	0.00	33	11	25.00
ICOSLG	0	genome.wustl.edu	37	21	45649927	45649927	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	45649927	45649927	G	A	SNP	ICOSLG	ENST00000400379	human	ensembl	74_37	-1	putative	missense	c.908	p.A303V	0.001	NULL	pfam_Ig_V-set,pfam_CD80_C2-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	ICOSLG	HGNC	ENSG00000160223	tier1	-	-	18	0	0.00	5	4	44.44
IDH3B	0	genome.wustl.edu	37	20	2639423	2639423	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	2639423	2639423	C	T	SNP	IDH3B	ENST00000380843	human	ensembl	74_37	-1	known	missense	c.1132	p.G378S	0.994	tigrfam_Isocitrate_DH_NAD	pfam_IsoPropMal-DH-like_dom,tigrfam_Isocitrate_DH_NAD	-	no_errors	IDH3B	HGNC	ENSG00000101365	tier1	-	-	63	0	0.00	48	23	32.39
IDO1	0	genome.wustl.edu	37	8	39785442	39785442	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	39785442	39785442	G	A	SNP	IDO1	ENST00000518237	human	ensembl	74_37	+1	known	missense	c.950	p.R317H	0.776	pfam_Indolamine_dOase	pfam_Indolamine_dOase	-	no_errors	IDO1	HGNC	ENSG00000131203	tier1	-	-	121	0	0.00	117	49	29.52
IDO2	0	genome.wustl.edu	37	8	39871110	39871110	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	39871110	39871110	C	T	SNP	IDO2	ENST00000502986	human	ensembl	74_37	+1	known	missense	c.785	p.A262V	0.000	pfam_Indolamine_dOase	pfam_Indolamine_dOase	-	no_errors	IDO2	HGNC	ENSG00000188676	tier1	-	-	65	0	0.00	55	30	35.29
IDO2	0	genome.wustl.edu	37	8	39871188	39871188	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	39871188	39871188	A	G	SNP	IDO2	ENST00000502986	human	ensembl	74_37	+1	known	missense	c.863	p.H288R	0.993	pfam_Indolamine_dOase	pfam_Indolamine_dOase	-	no_errors	IDO2	HGNC	ENSG00000188676	tier1	-	-	89	0	0.00	108	18	14.29
IFI44	0	genome.wustl.edu	37	1	79129487	79129487	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	79129487	79129487	A	-	DEL	IFI44	ENST00000370747	human	ensembl	74_37	+1	known	frame_shift_del	c.1326	p.K444fs	0.000	NULL	pfam_TLDc,superfamily_P-loop_NTPase	-	no_errors	IFI44	HGNC	ENSG00000137965	tier1			45	0	0.00	46	21	31.34
IFNB1	0	genome.wustl.edu	37	9	21077745	21077745	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	21077745	21077745	G	T	SNP	IFNB1	ENST00000380232	human	ensembl	74_37	-1	known	missense	c.124	p.L42M	0.996	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNB1	HGNC	ENSG00000171855	tier1	-	-	40	0	0.00	14	13	48.15
IFNE	0	genome.wustl.edu	37	9	21481450	21481450	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	21481450	21481450	G	T	SNP	IFNE	ENST00000448696	human	ensembl	74_37	-1	known	missense	c.244	p.H82N	0.858	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNE	HGNC	ENSG00000184995				21	0	0.00	18	2	10.00
IFNL2	0	genome.wustl.edu	37	19	39760216	39760216	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	39760216	39760216	T	G	SNP	IFNL2	ENST00000331982	human	ensembl	74_37	+1	known	missense	c.359	p.V120G	0.001	NULL	NULL	-	no_errors	IFNL2	HGNC	ENSG00000183709	tier1	-	-	140	0	0.00	129	15	10.34
IFNL2	0	genome.wustl.edu	37	19	39760220	39760220	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	39760220	39760220	C	T	SNP	IFNL2	ENST00000331982	human	ensembl	74_37	+1	known	silent	c.363	p.D121	0.000	NULL	NULL	-	no_errors	IFNL2	HGNC	ENSG00000183709	tier1	-	-	145	0	0.00	136	18	11.69
IFNL2	0	genome.wustl.edu	37	19	39760143	39760143	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	39760143	39760143	A	G	SNP	IFNL2	ENST00000331982	human	ensembl	74_37	+1	known	missense	c.286	p.M96V	0.009	NULL	NULL	-	no_errors	IFNL2	HGNC	ENSG00000183709				100	0	0.00	91	10	9.90
IFNL3	0	genome.wustl.edu	37	19	39734659	39734659	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	39734659	39734659	G	A	SNP	IFNL3	ENST00000413851	human	ensembl	74_37	-1	known	missense	c.397	p.L133F	0.018	NULL	NULL	-	no_errors	IFNL3	HGNC	ENSG00000197110	tier1	rs149832972	-	138	0	0.00	75	7	8.54
IFNL3	0	genome.wustl.edu	37	19	39734490	39734490	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	39734490	39734490	G	A	SNP	IFNL3	ENST00000413851	human	ensembl	74_37	-1	known	missense	c.466	p.H156Y	0.959	NULL	NULL	-	no_errors	IFNL3	HGNC	ENSG00000197110				207	0	0.00	90	9	9.09
IFT172	0	genome.wustl.edu	37	2	27682634	27682634	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	27682634	27682634	C	-	DEL	IFT172	ENST00000260570	human	ensembl	74_37	-1	known	frame_shift_del	c.2584	p.D862fs	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat	-	no_errors	IFT172	HGNC	ENSG00000138002	tier1			84	0	0.00	69	27	28.12
IFT172	0	genome.wustl.edu	37	2	27695198	27695198	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	27695198	27695198	G	A	SNP	IFT172	ENST00000260570	human	ensembl	74_37	-1	known	silent	c.1443	p.T481	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat	-	no_errors	IFT172	HGNC	ENSG00000138002	tier1	-	-	35	0	0.00	23	15	39.47
IFT80	0	genome.wustl.edu	37	3	160156368	160156368	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	160156368	160156368	T	-	DEL	IFT80	ENST00000483754	human	ensembl	74_37	-1	known	frame_shift_del	c.604	p.S202fs	0.000	NULL	pfam_WD40_repeat,pfam_Znf_C3HC4_RING-type,pfam_Znf_B-box,superfamily_WD40_repeat_dom,smart_Znf_RING,smart_WD40_repeat,pfscan_Znf_B-box,pfscan_Znf_RING,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	RP11-432B6.3	Clone_based_vega_gene	ENSG00000248710	tier1			22	0	0.00	12	9	42.86
IFT81	0	genome.wustl.edu	37	12	110655906	110655906	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	110655906	110655906	G	T	SNP	IFT81	ENST00000242591	human	ensembl	74_37	+1	known	missense	c.1906	p.A636S	0.997	NULL	NULL	-	no_errors	IFT81	HGNC	ENSG00000122970	tier1	-	-	78	0	0.00	67	6	8.22
IGF1R	0	genome.wustl.edu	37	15	99442809	99442809	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	99442809	99442809	A	-	DEL	IGF1R	ENST00000268035	human	ensembl	74_37	+1	known	frame_shift_del	c.1206	p.N404fs	0.966	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_EGF_rcpt_L	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	IGF1R	HGNC	ENSG00000140443	tier1			77	0	0.00	56	27	32.53
IGF2	0	genome.wustl.edu	37	11	2156651	2156651	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	2156651	2156651	C	T	SNP	IGF2	ENST00000434045	human	ensembl	74_37	-1	known	missense	c.271	p.G91R	1.000	pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_Insulin_family,prints_Insulin-like_growth_factor	pfam_IGF2_C,pfam_Insulin-like,superfamily_Insulin-like,smart_Insulin-like,prints_IGF2,prints_Insulin_family,prints_Insulin-like_growth_factor	-	no_errors	IGF2	HGNC	ENSG00000167244	tier1	-	-	134	0	0.00	67	50	42.74
IGF2R	0	genome.wustl.edu	37	6	160496984	160496984	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	160496984	160496984	T	C	SNP	IGF2R	ENST00000356956	human	ensembl	74_37	+1	known	missense	c.5272	p.Y1758H	1.000	pfam_CIMR,superfamily_Man6P_isomerase_rcpt-bd_dom	pfam_CIMR,pfam_FN_type2_col-bd,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_Kringle-like,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	-	no_errors	IGF2R	HGNC	ENSG00000197081	tier1	-	-	143	0	0.00	84	37	30.58
IGFN1	0	genome.wustl.edu	37	1	201179060	201179060	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	201179060	201179060	C	T	SNP	IGFN1	ENST00000335211	human	ensembl	74_37	+1	known	missense	c.5039	p.A1680V	0.001	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGFN1	HGNC	ENSG00000163395	tier1	-	-	124	0	0.00	130	49	27.37
IGLV6-57	0	genome.wustl.edu	37	22	22550472	22550472	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	22550472	22550472	G	T	SNP	IGLV6-57	ENST00000390285	human	ensembl	74_37	+1	known	missense	c.149	p.S50I	0.000	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGLV6-57	HGNC	ENSG00000211640	tier1	-	-	42	0	0.00	43	4	8.51
IGLV6-57	0	genome.wustl.edu	37	22	22550623	22550623	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	22550623	22550623	G	T	SNP	IGLV6-57	ENST00000390285	human	ensembl	74_37	+1	known	silent	c.300	p.L100	0.000	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGLV6-57	HGNC	ENSG00000211640	tier1	-	-	43	0	0.00	35	4	10.26
IGSF10	0	genome.wustl.edu	37	3	151164703	151164703	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	151164703	151164703	A	G	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	silent	c.3066	p.I1022	0.001	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580	tier1	-	-	40	0	0.00	24	20	45.45
IGSF10	0	genome.wustl.edu	37	3	151165983	151165983	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	151165983	151165983	G	T	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	missense	c.1786	p.H596N	0.291	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580	tier1	-	-	59	0	0.00	35	19	35.19
IGSF9	0	genome.wustl.edu	37	1	159899747	159899747	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	159899747	159899747	G	A	SNP	IGSF9	ENST00000368094	human	ensembl	74_37	-1	known	missense	c.2083	p.R695C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF9	HGNC	ENSG00000085552	tier1	-	-	69	0	0.00	56	13	18.84
IGSF9B	0	genome.wustl.edu	37	11	133795702	133795702	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	133795702	133795702	G	A	SNP	IGSF9B	ENST00000321016	human	ensembl	74_37	-1	known	missense	c.1966	p.R656C	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF9B	HGNC	ENSG00000080854	tier1	-	-	67	0	0.00	29	22	43.14
IKBKAP	0	genome.wustl.edu	37	9	111660955	111660955	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	111660955	111660955	G	T	SNP	IKBKAP	ENST00000374647	human	ensembl	74_37	-1	known	missense	c.2279	p.P760H	1.000	pfam_IKI3,pirsf_IKI3	pfam_IKI3,superfamily_ARM-type_fold,superfamily_UBA-like,pirsf_IKI3	-	no_errors	IKBKAP	HGNC	ENSG00000070061	tier1	-	-	51	0	0.00	57	6	9.52
IL13RA1	0	genome.wustl.edu	37	X	117904307	117904307	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	117904307	117904307	G	A	SNP	IL13RA1	ENST00000371637	human	ensembl	74_37	+1	known	missense	c.80	p.R27H	0.000	NULL	NULL	-	no_errors	IL13RA1	HGNC	ENSG00000131724	tier1	-	-	53	0	0.00	5	19	79.17
IL15RA	0	genome.wustl.edu	37	10	6008125	6008125	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	6008125	6008125	G	T	SNP	IL15RA	ENST00000379977	human	ensembl	74_37	-1	known	missense	c.266	p.P89H	0.981	superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	IL15RA	HGNC	ENSG00000134470	tier1	-	-	40	0	0.00	41	4	8.89
IL16	0	genome.wustl.edu	37	15	81598438	81598438	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	81598438	81598438	C	T	SNP	IL16	ENST00000302987	human	ensembl	74_37	+1	known	missense	c.3610	p.P1204S	0.000	superfamily_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,prints_IL-16	-	no_errors	IL16	HGNC	ENSG00000172349	tier1	-	-	33	0	0.00	20	7	25.93
IL17RC	0	genome.wustl.edu	37	3	9962221	9962221	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	9962221	9962221	T	C	SNP	IL17RC	ENST00000295981	human	ensembl	74_37	+1	known	missense	c.725	p.V242A	0.980	NULL	pfam_SEFIR	-	no_errors	IL17RC	HGNC	ENSG00000163702	tier1	-	-	57	0	0.00	27	23	46.00
IL17RD	0	genome.wustl.edu	37	3	57131680	57131680	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	57131680	57131680	G	A	SNP	IL17RD	ENST00000296318	human	ensembl	74_37	-1	known	missense	c.2051	p.T684M	0.000	NULL	pfam_SEFIR,superfamily_TIR_dom	-	no_errors	IL17RD	HGNC	ENSG00000144730	tier1	-	-	59	0	0.00	42	18	30.00
IL17RD	0	genome.wustl.edu	37	3	57132270	57132270	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	57132270	57132270	G	A	SNP	IL17RD	ENST00000296318	human	ensembl	74_37	-1	known	silent	c.1461	p.D487	0.983	pfam_SEFIR	pfam_SEFIR,superfamily_TIR_dom	-	no_errors	IL17RD	HGNC	ENSG00000144730	tier1	-	-	30	0	0.00	11	4	26.67
IL19	0	genome.wustl.edu	37	1	207010076	207010076	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	207010076	207010076	C	T	SNP	IL19	ENST00000340758	human	ensembl	74_37	+1	known	silent	c.183	p.H61	0.000	superfamily_4_helix_cytokine-like_core	pfam_IL-10/19/20/24/26_fam,superfamily_4_helix_cytokine-like_core,prints_IL-19,prints_IL-24	-	no_errors	IL19	HGNC	ENSG00000142224	tier1	-	-	53	0	0.00	53	23	30.26
IL1RL1	0	genome.wustl.edu	37	2	102956601	102956601	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	102956601	102956601	A	-	DEL	IL1RL1	ENST00000233954	human	ensembl	74_37	+1	known	frame_shift_del	c.316	p.K107fs	0.010	NULL	pfam_TIR_dom,pfam_Ig_I-set,superfamily_TIR_dom,smart_Ig_sub,smart_Ig_sub2,smart_TIR_dom,prints_IL-1_rcpt_I/II-typ,pfscan_TIR_dom,pfscan_Ig-like_dom	-	no_errors	IL1RL1	HGNC	ENSG00000115602	tier1			25	0	0.00	26	9	25.71
IL1RL2	0	genome.wustl.edu	37	2	102851427	102851427	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	102851427	102851427	G	A	SNP	IL1RL2	ENST00000264257	human	ensembl	74_37	+1	known	silent	c.1368	p.S456	0.000	pfam_TIR_dom,superfamily_TIR_dom,smart_TIR_dom,pfscan_TIR_dom	pfam_TIR_dom,superfamily_TIR_dom,smart_Ig_sub,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom,prints_IL-1_rcpt_I/II-typ,prints_IL-1_rcpt_I-typ	-	no_errors	IL1RL2	HGNC	ENSG00000115598	tier1	-	-	70	0	0.00	56	25	30.86
IL36G	0	genome.wustl.edu	37	2	113737642	113737643	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	113737642	113737643	-	A	INS	IL36G	ENST00000259205	human	ensembl	74_37	+1	known	frame_shift_ins	c.217_218	p.D73fs	0.000:0.000	pfam_IL-1,superfamily_Cytokine_IL1-like,smart_IL-1,prints_IL-1	pfam_IL-1,superfamily_Cytokine_IL1-like,smart_IL-1,prints_IL-1RA/IL-36,prints_IL-1	-	no_errors	IL36G	HGNC	ENSG00000136688	tier1			32	0	0.00	17	10	37.04
ILK	0	genome.wustl.edu	37	11	6629392	6629392	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	6629392	6629392	C	-	DEL	ILK	ENST00000299421	human	ensembl	74_37	+1	known	frame_shift_del	c.206	p.L71fs	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Integrin-linked_kinase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ankyrin_rpt,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Integrin-linked_kinase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ILK	HGNC	ENSG00000166333	tier1			91	0	0.00	40	21	34.43
IMMT	0	genome.wustl.edu	37	2	86385684	86385685	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	86385684	86385685	AA	-	DEL	IMMT	ENST00000490238	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	IMMT	HGNC	ENSG00000132305	tier1			60	0	0.00	42	19	31.15
IMPDH1	0	genome.wustl.edu	37	7	128035269	128035269	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	128035269	128035269	G	T	SNP	IMPDH1	ENST00000338791	human	ensembl	74_37	-1	known	missense	c.1321	p.R441S	1.000	pfam_IMP_DH_GMPRt,pfam_2Npropane_dOase,pfam_FMN-dep_DH,tigrfam_IMP_DH	pfam_IMP_DH_GMPRt,pfam_CBS_dom,pfam_2Npropane_dOase,pfam_FMN-dep_DH,smart_CBS_dom,tigrfam_IMP_DH	-	no_errors	IMPDH1	HGNC	ENSG00000106348	tier1	-	-	63	0	0.00	51	4	7.27
INO80	0	genome.wustl.edu	37	15	41371904	41371904	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	41371904	41371904	G	A	SNP	INO80	ENST00000361937	human	ensembl	74_37	-1	known	missense	c.1126	p.R376W	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	INO80	HGNC	ENSG00000128908	tier1	-	-	104	0	0.00	57	36	38.71
INO80D	0	genome.wustl.edu	37	2	206882406	206882406	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	206882406	206882406	T	-	DEL	INO80D	ENST00000403263	human	ensembl	74_37	-1	known	frame_shift_del	c.1540	p.M514fs	1.000	NULL	NULL	-	no_errors	INO80D	HGNC	ENSG00000114933	tier1			59	0	0.00	34	23	40.35
INPP4A	0	genome.wustl.edu	37	2	99181151	99181151	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	99181151	99181151	C	T	SNP	INPP4A	ENST00000074304	human	ensembl	74_37	+1	known	missense	c.2092	p.H698Y	1.000	NULL	superfamily_C2_dom	-	no_errors	INPP4A	HGNC	ENSG00000040933	tier1	-	-	59	0	0.00	23	14	37.84
INPP5B	0	genome.wustl.edu	37	1	38355359	38355359	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	38355359	38355359	G	A	SNP	INPP5B	ENST00000373023	human	ensembl	74_37	-1	known	missense	c.907	p.R303C	1.000	NULL	pfam_Endo/exonuclease/phosphatase,pfam_RhoGAP_dom,superfamily_Endo/exonuclease/phosphatase,superfamily_Rho_GTPase_activation_prot,smart_IPPc,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	INPP5B	HGNC	ENSG00000204084	tier1	-	-	48	0	0.00	34	21	38.18
INSM2	0	genome.wustl.edu	37	14	36005057	36005057	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	36005057	36005057	T	-	DEL	INSM2	ENST00000307169	human	ensembl	74_37	+1	known	frame_shift_del	c.1599	p.F535fs	0.624	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	INSM2	HGNC	ENSG00000168348	tier1			70	0	0.00	38	19	33.33
INTS1	0	genome.wustl.edu	37	7	1534466	1534466	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	1534466	1534466	G	T	SNP	INTS1	ENST00000389470	human	ensembl	74_37	-1	known	silent	c.2280	p.P760	0.008	NULL	pfam_DUF3677,superfamily_ARM-type_fold	-	no_errors	INTS1	HGNC	ENSG00000164880	tier1	-	-	52	0	0.00	51	4	7.27
INTS10	0	genome.wustl.edu	37	8	19684060	19684060	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	19684060	19684060	A	-	DEL	INTS10	ENST00000397977	human	ensembl	74_37	+1	known	frame_shift_del	c.1130	p.T379fs	1.000	NULL	NULL	-	no_errors	INTS10	HGNC	ENSG00000104613	tier1			55	0	0.00	59	16	21.33
INTS10	0	genome.wustl.edu	37	8	19709225	19709225	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	19709225	19709225	G	A	SNP	INTS10	ENST00000397977	human	ensembl	74_37	+1	known	missense	c.2042	p.R681H	1.000	NULL	NULL	-	no_errors	INTS10	HGNC	ENSG00000104613	tier1	-	-	59	0	0.00	51	18	26.09
IPO4	0	genome.wustl.edu	37	14	24654089	24654089	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	24654089	24654089	G	A	SNP	IPO4	ENST00000354464	human	ensembl	74_37	-1	known	silent	c.1506	p.S502	1.000	superfamily_ARM-type_fold	pfam_HEAT,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_HEAT_type_2,pfscan_Importin-beta_N	-	no_errors	IPO4	HGNC	ENSG00000196497	tier1	-	-	62	0	0.00	31	27	45.00
IQCF1	0	genome.wustl.edu	37	3	51929229	51929229	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	51929229	51929229	G	T	SNP	IQCF1	ENST00000310914	human	ensembl	74_37	-1	known	missense	c.295	p.Q99K	0.642	superfamily_P-loop_NTPase	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCF1	HGNC	ENSG00000173389	tier1	-	-	22	0	0.00	21	4	16.00
IQGAP2	0	genome.wustl.edu	37	5	76003254	76003254	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	76003254	76003254	A	-	DEL	IQGAP2	ENST00000508410	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	IQGAP2	HGNC	ENSG00000145703	tier1			44	0	0.00	44	5	10.20
IQSEC2	0	genome.wustl.edu	37	X	53285056	53285056	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	53285056	53285056	C	G	SNP	IQSEC2	ENST00000396435	human	ensembl	74_37	-1	known	missense	c.925	p.E309Q	1.000	NULL	pfam_Sec7_dom,superfamily_Sec7_dom,superfamily_P-loop_NTPase,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_IQ_motif_EF-hand-BS,pfscan_Sec7_dom	-	no_errors	IQSEC2	HGNC	ENSG00000124313	tier1	-	-	32	0	0.00	5	21	80.77
IQUB	0	genome.wustl.edu	37	7	123092969	123092969	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	123092969	123092969	C	T	SNP	IQUB	ENST00000324698	human	ensembl	74_37	-1	known	missense	c.2204	p.R735H	0.000	NULL	pfam_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	IQUB	HGNC	ENSG00000164675	tier1	-	-	24	0	0.00	17	11	39.29
IRF2BP2	0	genome.wustl.edu	37	1	234743089	234743089	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	234743089	234743089	G	A	SNP	IRF2BP2	ENST00000366609	human	ensembl	74_37	-1	novel	nonsense	c.1558	p.Q520*	1.000	pfam_Interferon_reg_fac2-bd1_2_Znf	pfam_Interferon_reg_fac2-bd1_2_Znf	-	no_errors	IRF2BP2	HGNC	ENSG00000168264	tier1	-	-	65	0	0.00	71	4	5.26
IRS1	0	genome.wustl.edu	37	2	227663183	227663183	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	227663183	227663183	T	C	SNP	IRS1	ENST00000305123	human	ensembl	74_37	-1	known	missense	c.272	p.E91G	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047	tier1	-	-	79	0	0.00	40	41	50.62
IRS1	0	genome.wustl.edu	37	2	227663189	227663189	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	227663189	227663189	C	T	SNP	IRS1	ENST00000305123	human	ensembl	74_37	-1	known	missense	c.266	p.R89Q	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047	tier1	-	-	89	0	0.00	56	28	33.33
IRS2	0	genome.wustl.edu	37	13	110435020	110435020	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	110435020	110435020	C	T	SNP	IRS2	ENST00000375856	human	ensembl	74_37	-1	known	silent	c.3381	p.P1127	0.228	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS2	HGNC	ENSG00000185950	tier1	-	-	28	0	0.00	29	11	27.50
IRS2	0	genome.wustl.edu	37	13	110436713	110436713	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	110436713	110436713	G	A	SNP	IRS2	ENST00000375856	human	ensembl	74_37	-1	known	missense	c.1688	p.A563V	0.157	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS2	HGNC	ENSG00000185950	tier1	-	-	24	0	0.00	14	8	36.36
IRX1	0	genome.wustl.edu	37	5	3599698	3599698	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	3599698	3599698	C	T	SNP	IRX1	ENST00000302006	human	ensembl	74_37	+1	known	silent	c.636	p.G212	0.995	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX1	HGNC	ENSG00000170549	tier1	-	-	56	0	0.00	59	15	20.27
IRX1	0	genome.wustl.edu	37	5	3599713	3599713	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	3599713	3599713	C	T	SNP	IRX1	ENST00000302006	human	ensembl	74_37	+1	known	silent	c.651	p.A217	0.995	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX1	HGNC	ENSG00000170549	tier1	-	-	53	0	0.00	49	18	26.87
IRX1	0	genome.wustl.edu	37	5	3600309	3600309	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	3600309	3600309	T	A	SNP	IRX1	ENST00000302006	human	ensembl	74_37	+1	known	missense	c.1247	p.V416D	0.003	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX1	HGNC	ENSG00000170549	tier1	-	-	20	0	0.00	10	22	68.75
ISL2	0	genome.wustl.edu	37	15	76633630	76633630	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	76633630	76633630	C	A	SNP	ISL2	ENST00000290759	human	ensembl	74_37	+1	known	silent	c.951	p.A317	0.999	NULL	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	ISL2	HGNC	ENSG00000159556	tier1	-	-	32	0	0.00	12	11	47.83
ISM1	0	genome.wustl.edu	37	20	13269234	13269234	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	13269234	13269234	G	A	SNP	ISM1	ENST00000262487	human	ensembl	74_37	+1	known	missense	c.691	p.V231I	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_AMOP,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_AMOP,pfscan_AMOP,pfscan_Thrombospondin_1_rpt	-	no_errors	ISM1	HGNC	ENSG00000101230	tier1	-	-	65	0	0.00	28	15	34.88
ISM1	0	genome.wustl.edu	37	20	13279856	13279856	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	13279856	13279856	C	T	SNP	ISM1	ENST00000262487	human	ensembl	74_37	+1	known	missense	c.1145	p.A382V	1.000	pfam_AMOP,smart_AMOP,pfscan_AMOP	pfam_AMOP,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_AMOP,pfscan_AMOP,pfscan_Thrombospondin_1_rpt	-	no_errors	ISM1	HGNC	ENSG00000101230	tier1	-	-	21	0	0.00	15	10	40.00
ITGA10	0	genome.wustl.edu	37	1	145532467	145532467	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	145532467	145532467	A	G	SNP	ITGA10	ENST00000369304	human	ensembl	74_37	+1	known	missense	c.920	p.H307R	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA10	HGNC	ENSG00000143127	tier1	-	-	29	0	0.00	10	20	66.67
ITGA2	0	genome.wustl.edu	37	5	52351981	52351982	+	Splice_Site	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	52351981	52351982	-	A	INS	ITGA2	ENST00000296585	human	ensembl	74_37	+1	known	splice_site_ins	c.1096+2_1096+1	e9+2	1.000:1.000	-	-	-	no_errors	ITGA2	HGNC	ENSG00000164171	tier1			21	0	0.00	19	10	34.48
ITGA2	0	genome.wustl.edu	37	5	52369001	52369001	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	52369001	52369001	C	T	SNP	ITGA2	ENST00000296585	human	ensembl	74_37	+1	known	missense	c.2483	p.T828M	0.159	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA2	HGNC	ENSG00000164171	tier1	rs79932422	-	46	0	0.00	23	22	48.89
ITGA4	0	genome.wustl.edu	37	2	182347339	182347339	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	182347339	182347339	A	T	SNP	ITGA4	ENST00000397033	human	ensembl	74_37	+1	known	missense	c.1002	p.R334S	0.981	pfam_FG-GAP,smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA4	HGNC	ENSG00000115232	tier1	-	-	116	0	0.00	66	37	35.92
ITGA8	0	genome.wustl.edu	37	10	15573078	15573078	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	15573078	15573078	G	T	SNP	ITGA8	ENST00000378076	human	ensembl	74_37	-1	known	missense	c.2953	p.P985T	1.000	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA8	HGNC	ENSG00000077943	tier1	-	-	39	0	0.00	54	4	6.90
ITGAD	0	genome.wustl.edu	37	16	31425890	31425890	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	31425890	31425890	G	-	DEL	ITGAD	ENST00000389202	human	ensembl	74_37	+1	known	frame_shift_del	c.2115	p.I707fs	0.803	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAD	HGNC	ENSG00000156886	tier1			71	0	0.00	42	19	31.15
ITGB4	0	genome.wustl.edu	37	17	73732134	73732134	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	73732134	73732134	C	T	SNP	ITGB4	ENST00000200181	human	ensembl	74_37	+1	known	nonsense	c.1660	p.R554*	1.000	pirsf_Integrin_bsu-4,pfam_EGF_extracell	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,pfam_Fibronectin_type3,pfam_Calx_beta,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Fibronectin_type3,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,smart_Calx_beta,smart_Fibronectin_type3,prints_Integrin_bsu,pfscan_Fibronectin_type3	-	no_errors	ITGB4	HGNC	ENSG00000132470	tier1	rs121912462	-	39	0	0.00	14	11	44.00
ITPKA	0	genome.wustl.edu	37	15	41794044	41794044	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	41794044	41794044	C	T	SNP	ITPKA	ENST00000260386	human	ensembl	74_37	+1	known	silent	c.798	p.G266	0.973	pfam_IPK	pfam_IPK	-	no_errors	ITPKA	HGNC	ENSG00000137825	tier1	-	-	54	0	0.00	27	26	49.06
ITPKB	0	genome.wustl.edu	37	1	226924171	226924171	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	226924171	226924171	G	T	SNP	ITPKB	ENST00000272117	human	ensembl	74_37	-1	known	missense	c.989	p.A330D	0.000	NULL	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772	tier1	-	-	70	0	0.00	86	5	5.49
ITPR2	0	genome.wustl.edu	37	12	26629856	26629856	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	26629856	26629856	G	T	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	missense	c.6208	p.P2070T	1.000	NULL	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104	tier1	-	-	38	0	0.00	73	4	5.19
ITPRIP	0	genome.wustl.edu	37	10	106074319	106074319	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	106074319	106074319	G	A	SNP	ITPRIP	ENST00000278071	human	ensembl	74_37	-1	known	silent	c.1491	p.A497	0.922	NULL	NULL	-	no_errors	ITPRIP	HGNC	ENSG00000148841	tier1	-	-	31	0	0.00	23	12	34.29
ITSN1	0	genome.wustl.edu	37	21	35209308	35209309	+	RNA	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	35209308	35209309	-	C	INS	ITSN1	ENST00000472548	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	ITSN1	HGNC	ENSG00000205726	tier1			36	0	0.00	23	21	47.73
IVD	0	genome.wustl.edu	37	15	40705232	40705232	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	40705232	40705232	G	T	SNP	IVD	ENST00000487418	human	ensembl	74_37	+1	known	missense	c.739	p.G247W	1.000	superfamily_AcylCoA_DH/oxidase_NM_dom	pfam_AcylCo_DH/oxidase_C,pfam_AcylCoA_DH/ox_N,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C	-	no_errors	IVD	HGNC	ENSG00000128928	tier1	-	-	44	0	0.00	45	4	8.16
IVL	0	genome.wustl.edu	37	1	152883089	152883089	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	152883089	152883089	G	T	SNP	IVL	ENST00000368764	human	ensembl	74_37	+1	known	missense	c.816	p.Q272H	0.120	pfam_Involucrin_rpt	pfam_Involucrin_N,pfam_Involucrin_rpt	-	no_errors	IVL	HGNC	ENSG00000163207	tier1	-	-	98	0	0.00	101	28	21.71
JKAMP	0	genome.wustl.edu	37	14	59961902	59961902	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	59961902	59961902	G	A	SNP	JKAMP	ENST00000356057	human	ensembl	74_37	+1	known	missense	c.442	p.V148I	0.002	pfam_DUF766	pfam_DUF766	-	no_errors	JKAMP	HGNC	ENSG00000050130	tier1	-	-	107	0	0.00	83	34	29.06
JMJD1C	0	genome.wustl.edu	37	10	64974152	64974152	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	64974152	64974152	T	C	SNP	JMJD1C	ENST00000399262	human	ensembl	74_37	-1	known	missense	c.1775	p.E592G	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD1C	HGNC	ENSG00000171988	tier1	-	-	45	0	0.00	33	17	34.00
JMJD7-PLA2G4B	0	genome.wustl.edu	37	15	42127036	42127036	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	42127036	42127036	C	T	SNP	JMJD7-PLA2G4B	ENST00000382448	human	ensembl	74_37	+1	known	missense	c.163	p.R55C	1.000	NULL	pfam_LysoPLipase_cat_dom,pfam_C2_dom,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_dom,smart_JmjC_dom,smart_C2_dom,smart_LysoPLipase_cat_dom,pfscan_JmjC_dom,pfscan_C2_dom,pfscan_LysoPLipase_cat_dom	-	no_errors	JMJD7-PLA2G4B	HGNC	ENSG00000168970	tier1	-	-	57	0	0.00	26	6	18.75
JPH3	0	genome.wustl.edu	37	16	87723991	87723991	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	87723991	87723991	G	T	SNP	JPH3	ENST00000284262	human	ensembl	74_37	+1	known	silent	c.2025	p.V675	0.895	pirsf_Junctophilin	pirsf_Junctophilin,pfam_MORN,smart_MORN	-	no_errors	JPH3	HGNC	ENSG00000154118	tier1	-	-	72	0	0.00	46	7	13.21
JSRP1	0	genome.wustl.edu	37	19	2252783	2252783	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	2252783	2252783	C	T	SNP	JSRP1	ENST00000300961	human	ensembl	74_37	-1	known	missense	c.541	p.A181T	0.010	NULL	NULL	-	no_errors	JSRP1	HGNC	ENSG00000167476	tier1	-	-	65	0	0.00	30	17	36.17
KALRN	0	genome.wustl.edu	37	3	124397062	124397062	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	124397062	124397062	C	T	SNP	KALRN	ENST00000360013	human	ensembl	74_37	+1	known	missense	c.7219	p.R2407C	1.000	NULL	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145	tier1	-	-	48	0	0.00	29	10	25.64
KANK1	0	genome.wustl.edu	37	9	742405	742405	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	742405	742405	C	T	SNP	KANK1	ENST00000382297	human	ensembl	74_37	+1	known	silent	c.3897	p.N1299	0.911	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_KN_motif,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK1	HGNC	ENSG00000107104	tier1	-	-	29	0	0.00	19	12	38.71
KANSL2	0	genome.wustl.edu	37	12	49075916	49075916	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	49075916	49075916	G	A	SNP	KANSL2	ENST00000550347	human	ensembl	74_37	-1	putative	missense	c.49	p.L17F	0.007	NULL	NULL	-	no_errors	KANSL2	HGNC	ENSG00000139620	tier1	-	-	22	0	0.00	13	5	27.78
KAT2B	0	genome.wustl.edu	37	3	20142821	20142821	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	20142821	20142821	G	T	SNP	KAT2B	ENST00000263754	human	ensembl	74_37	+1	known	missense	c.712	p.A238S	0.980	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N,pfam_Bromodomain,pfam_GNAT_dom,superfamily_Bromodomain,superfamily_Acyl_CoA_acyltransferase,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain,pfscan_GNAT_dom	-	no_errors	KAT2B	HGNC	ENSG00000114166	tier1	-	-	59	0	0.00	62	4	6.06
KAT6A	0	genome.wustl.edu	37	8	41838388	41838388	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	41838388	41838388	G	T	SNP	KAT6A	ENST00000265713	human	ensembl	74_37	-1	known	missense	c.883	p.P295T	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_MOZ_SAS,pfam_Znf_PHD-finger,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6A	HGNC	ENSG00000083168				28	0	0.00	57	3	5.00
KCNA6	0	genome.wustl.edu	37	12	4919978	4919978	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	4919978	4919978	C	A	SNP	KCNA6	ENST00000280684	human	ensembl	74_37	+1	known	silent	c.771	p.S257	0.999	prints_K_chnl_volt-dep_Kv1.6	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.6,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA6	HGNC	ENSG00000151079	tier1	-	-	26	0	0.00	51	12	19.05
KCNAB2	0	genome.wustl.edu	37	1	6111717	6111717	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	6111717	6111717	C	T	SNP	KCNAB2	ENST00000378083	human	ensembl	74_37	+1	known	missense	c.121	p.R41W	1.000	NULL	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_K_chnl_volt-dep_bsu_KCNAB1,prints_K_chnl_volt-dep_bsu_KCNAB2,prints_K_chnl_volt-dep_bsu_KCNAB-rel,prints_K_chnl_volt-dep_bsu_KCNAB3,tigrfam_K_chnl_volt-dep_bsu_KCNAB	-	no_errors	KCNAB2	HGNC	ENSG00000069424				14	0	0.00	6	4	40.00
KCNB2	0	genome.wustl.edu	37	8	73480397	73480397	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	73480397	73480397	A	-	DEL	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	frame_shift_del	c.428	p.E146fs	1.000	prints_K_chnl_volt-dep_Kv2	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674	tier1			52	0	0.00	33	15	31.25
KCNB2	0	genome.wustl.edu	37	8	73849363	73849363	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	73849363	73849363	C	T	SNP	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	silent	c.1773	p.T591	0.022	pfam_K_chnl_volt-dep_Kv2	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674	tier1	rs146092769	-	22	0	0.00	25	8	24.24
KCNC3	0	genome.wustl.edu	37	19	50819305	50819305	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	50819305	50819305	G	-	DEL	KCNC3	ENST00000391818	human	ensembl	74_37	-1	known	frame_shift_del	c.224	p.P75fs	1.000	NULL	NULL	-	no_errors	KCNC3	HGNC	ENSG00000131398	tier1			24	0	0.00	13	10	43.48
KCND3	0	genome.wustl.edu	37	1	112525257	112525257	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	112525257	112525257	G	A	SNP	KCND3	ENST00000315987	human	ensembl	74_37	-1	known	missense	c.92	p.P31L	1.000	pfam_Shal-type,prints_K_chnl_volt-dep_Kv4.3	pfam_K_chnl_volt-dep_Kv4_C,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_Shal-type,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.3,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND3	HGNC	ENSG00000171385	tier1	-	-	50	0	0.00	26	16	38.10
KCNH1	0	genome.wustl.edu	37	1	210948724	210948724	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	210948724	210948724	C	T	SNP	KCNH1	ENST00000271751	human	ensembl	74_37	-1	known	missense	c.2078	p.R693Q	1.000	superfamily_cNMP-bd-like,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH1	HGNC	ENSG00000143473	tier1	-	-	58	0	0.00	58	35	37.63
KCNH2	0	genome.wustl.edu	37	7	150647021	150647021	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	150647021	150647021	C	T	SNP	KCNH2	ENST00000430723	human	ensembl	74_37	-1	known	missense	c.2633	p.R878H	0.021	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,tigrfam_PAS	-	no_errors	KCNH2	HGNC	ENSG00000055118	tier1	-	-	71	0	0.00	47	8	14.55
KCNH3	0	genome.wustl.edu	37	12	49937631	49937631	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	49937631	49937631	C	T	SNP	KCNH3	ENST00000550434	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	KCNH3	HGNC	ENSG00000135519	tier1	-	-	79	0	0.00	79	6	7.06
KCNH3	0	genome.wustl.edu	37	12	49943310	49943310	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	49943310	49943310	C	T	SNP	KCNH3	ENST00000257981	human	ensembl	74_37	+1	known	missense	c.1555	p.R519C	1.000	superfamily_cNMP-bd-like	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_4,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH3	HGNC	ENSG00000135519	tier1	-	-	88	0	0.00	33	25	43.10
KCNH8	0	genome.wustl.edu	37	3	19190243	19190243	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	19190243	19190243	A	-	DEL	KCNH8	ENST00000328405	human	ensembl	74_37	+1	known	frame_shift_del	c.32	p.N12fs	1.000	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_4,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,superfamily_tRNA-bd_arm,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_EAG,tigrfam_PAS	-	no_errors	KCNH8	HGNC	ENSG00000183960	tier1			112	0	0.00	54	32	37.21
KCNJ10	0	genome.wustl.edu	37	1	160011799	160011799	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	160011799	160011799	C	T	SNP	KCNJ10	ENST00000368089	human	ensembl	74_37	-1	known	missense	c.524	p.R175Q	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.2,prints_K_chnl_inward-rec_Kir1.1	-	no_errors	KCNJ10	HGNC	ENSG00000177807	tier1	-	-	35	0	0.00	48	15	23.81
KCNT1	0	genome.wustl.edu	37	9	138594199	138594199	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	138594199	138594199	G	A	SNP	KCNT1	ENST00000298480	human	ensembl	74_37	+1	known	missense	c.95	p.G32D	0.288	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT1	HGNC	ENSG00000107147	tier1	-	-	17	0	0.00	4	8	66.67
KCNU1	0	genome.wustl.edu	37	8	36793351	36793351	+	Silent	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	36793351	36793351	T	G	SNP	KCNU1	ENST00000399881	human	ensembl	74_37	+1	known	silent	c.3363	p.P1121	0.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_Ca-activ_BK_asu	-	no_errors	KCNU1	HGNC	ENSG00000215262	tier1	-	-	48	0	0.00	46	25	35.21
KCNV1	0	genome.wustl.edu	37	8	110980379	110980379	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	110980379	110980379	G	A	SNP	KCNV1	ENST00000297404	human	ensembl	74_37	-1	known	nonsense	c.1441	p.R481*	1.000	prints_K_chnl_volt-dep_Kv8	pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv8,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv4	-	no_errors	KCNV1	HGNC	ENSG00000164794	tier1	-	-	47	0	0.00	51	22	30.14
KCNV1	0	genome.wustl.edu	37	8	110984520	110984520	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	110984520	110984520	G	T	SNP	KCNV1	ENST00000297404	human	ensembl	74_37	-1	known	missense	c.958	p.L320M	1.000	pfam_Ion_trans_dom,prints_K_chnl	pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv8,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv4	-	no_errors	KCNV1	HGNC	ENSG00000164794				36	0	0.00	48	3	5.88
KCTD15	0	genome.wustl.edu	37	19	34304928	34304928	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	34304928	34304928	C	-	DEL	KCTD15	ENST00000592363	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	KCTD15	HGNC	ENSG00000153885	tier1			22	0	0.00	24	9	27.27
KCTD19	0	genome.wustl.edu	37	16	67325658	67325658	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	67325658	67325658	G	-	DEL	KCTD19	ENST00000304372	human	ensembl	74_37	-1	known	frame_shift_del	c.2301	p.V768fs	0.051	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold	-	no_errors	KCTD19	HGNC	ENSG00000168676	tier1			70	0	0.00	13	20	60.61
KCTD8	0	genome.wustl.edu	37	4	44177100	44177100	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	44177100	44177100	G	A	SNP	KCTD8	ENST00000360029	human	ensembl	74_37	-1	known	nonsense	c.1129	p.Q377*	0.968	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD8	HGNC	ENSG00000183783	tier1	-	-	107	0	0.00	126	15	10.64
KDM1B	0	genome.wustl.edu	37	6	18212815	18212815	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	18212815	18212815	G	T	SNP	KDM1B	ENST00000388870	human	ensembl	74_37	+1	known	missense	c.1966	p.G656C	1.000	pfam_Amino_oxidase	pfam_Amino_oxidase,pfam_Znf_CW,pfam_FAD-dep_OxRdtase,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_SWIRM,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_mOase_FAD-bd,pfam_CHP00275_HI0933-like,pfam_FAD_bind_dom,superfamily_Homeodomain-like,pfscan_SWIRM,pfscan_Znf_CW	-	no_errors	KDM1B	HGNC	ENSG00000165097	tier1	-	-	98	0	0.00	103	7	6.36
KDM4A-AS1	0	genome.wustl.edu	37	1	44169066	44169069	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	44169066	44169069	TTTT	-	DEL	KDM4A-AS1	ENST00000453015	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.002:0.003:0.002	-	-	-	no_errors	KDM4A-AS1	HGNC	ENSG00000236200	tier1			13	0	0.00	5	3	37.50
KDM4E	0	genome.wustl.edu	37	11	94758856	94758856	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	94758856	94758856	T	C	SNP	KDM4E	ENST00000450979	human	ensembl	74_37	+1	known	silent	c.135	p.L45	0.040	pfam_TF_JmjN,smart_TF_JmjN,pfscan_TF_JmjN	pfam_JmjC_dom,pfam_TF_JmjN,smart_TF_JmjN,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4E	HGNC	ENSG00000235268	tier1	rs2020207	-	32	0	0.00	20	6	23.08
KDM5A	0	genome.wustl.edu	37	12	416953	416953	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	416953	416953	T	-	DEL	KDM5A	ENST00000399788	human	ensembl	74_37	-1	known	frame_shift_del	c.3597	p.G1200fs	0.987	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5A	HGNC	ENSG00000073614	tier1			40	0	0.00	78	23	22.77
KDM5B	0	genome.wustl.edu	37	1	202710852	202710853	+	Splice_Site	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	202710852	202710853	-	A	INS	KDM5B	ENST00000367264	human	ensembl	74_37	-1	known	splice_site_ins	c.2698-3_2698-2	e20-2	1.000:0.010	-	-	-	no_errors	KDM5B	HGNC	ENSG00000117139	tier1			23	0	0.00	45	13	22.41
KDM6B	0	genome.wustl.edu	37	17	7750429	7750429	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	7750429	7750429	C	T	SNP	KDM6B	ENST00000254846	human	ensembl	74_37	+1	known	missense	c.916	p.R306W	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM6B	HGNC	ENSG00000132510	tier1	-	-	31	0	0.00	17	14	45.16
KEAP1	0	genome.wustl.edu	37	19	10610581	10610581	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	10610581	10610581	C	T	SNP	KEAP1	ENST00000171111	human	ensembl	74_37	-1	known	silent	c.129	p.T43	0.979	pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KEAP1	HGNC	ENSG00000079999	tier1	-	-	59	0	0.00	26	10	27.78
KHDRBS3	0	genome.wustl.edu	37	8	136659489	136659492	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	136659489	136659492	AAAA	-	DEL	KHDRBS3	ENST00000518728	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000:1.000:1.000:0.910	-	-	-	no_errors	KHDRBS3	HGNC	ENSG00000131773	tier1			9	0	0.00	19	13	40.62
KIAA0100	0	genome.wustl.edu	37	17	26962454	26962454	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	26962454	26962454	G	A	SNP	KIAA0100	ENST00000528896	human	ensembl	74_37	-1	known	silent	c.2151	p.G717	0.000	NULL	pfam_FMP27_C,pfam_FMP27_N,pfam_FMP27_GFWDK_dom	-	no_errors	KIAA0100	HGNC	ENSG00000007202	tier1	-	-	83	0	0.00	46	43	48.31
KIAA0195	0	genome.wustl.edu	37	17	73490811	73490811	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	73490811	73490811	C	T	SNP	KIAA0195	ENST00000314256	human	ensembl	74_37	+1	known	silent	c.2511	p.I837	0.929	NULL	pfam_ATPase_P-typ_cation-transptr_C	-	no_errors	KIAA0195	HGNC	ENSG00000177728	tier1	-	-	130	0	0.00	67	48	41.74
KIAA0226	0	genome.wustl.edu	37	3	197428645	197428645	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	197428645	197428645	A	G	SNP	KIAA0226	ENST00000296343	human	ensembl	74_37	-1	known	missense	c.661	p.Y221H	0.000	NULL	pfam_Run,smart_Run,pfscan_Run	-	no_errors	KIAA0226	HGNC	ENSG00000145016	tier1	-	-	120	0	0.00	90	39	30.23
KIAA0226L	0	genome.wustl.edu	37	13	46946506	46946506	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	46946506	46946506	A	G	SNP	KIAA0226L	ENST00000389908	human	ensembl	74_37	-1	known	silent	c.105	p.T35	0.000	NULL	NULL	-	no_errors	KIAA0226L	HGNC	ENSG00000102445	tier1	-	-	119	0	0.00	98	39	28.47
KIAA0355	0	genome.wustl.edu	37	19	34818368	34818368	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	34818368	34818368	G	T	SNP	KIAA0355	ENST00000299505	human	ensembl	74_37	+1	known	missense	c.748	p.A250S	1.000	NULL	NULL	-	no_errors	KIAA0355	HGNC	ENSG00000166398	tier1	-	-	58	0	0.00	48	4	7.69
KIAA1161	0	genome.wustl.edu	37	9	34371719	34371719	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	34371719	34371719	C	T	SNP	KIAA1161	ENST00000297625	human	ensembl	74_37	-1	known	missense	c.1121	p.R374H	0.999	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	-	no_errors	KIAA1161	HGNC	ENSG00000164976	tier1	-	-	17	0	0.00	13	9	40.91
KIAA1199	0	genome.wustl.edu	37	15	81217986	81217986	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	81217986	81217986	C	T	SNP	KIAA1199	ENST00000220244	human	ensembl	74_37	+1	known	silent	c.2310	p.A770	0.142	superfamily_Pectin_lyase_fold/virulence	pfam_G8_domain,superfamily_Pectin_lyase_fold/virulence	-	no_errors	KIAA1199	HGNC	ENSG00000103888	tier1	-	-	92	0	0.00	39	25	39.06
KIAA1217	0	genome.wustl.edu	37	10	24784015	24784018	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	24784015	24784018	AAAA	-	DEL	KIAA1217	ENST00000460373	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000:0.003:0.002:0.000	-	-	-	no_errors	KIAA1217	HGNC	ENSG00000120549	tier1			23	0	0.00	19	11	36.67
KIAA1244	0	genome.wustl.edu	37	6	138655275	138655275	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	138655275	138655275	G	A	SNP	KIAA1244	ENST00000251691	human	ensembl	74_37	+1	known	missense	c.5292	p.M1764I	1.000	NULL	pfam_DUF1981_Sec7_assoc,superfamily_ARM-type_fold,superfamily_Sec7_dom,smart_Sec7_dom	-	no_errors	KIAA1244	HGNC	ENSG00000112379	tier1	-	-	26	0	0.00	12	6	33.33
KIAA1377	0	genome.wustl.edu	37	11	101793464	101793465	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	101793464	101793465	-	T	INS	KIAA1377	ENST00000263468	human	ensembl	74_37	+1	known	frame_shift_ins	c.221_222	p.V76fs	1.000:1.000	NULL	NULL	-	no_errors	KIAA1377	HGNC	ENSG00000110318	tier1			24	0	0.00	25	9	26.47
KIAA1456	0	genome.wustl.edu	37	8	12878882	12878882	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	12878882	12878882	G	A	SNP	KIAA1456	ENST00000524591	human	ensembl	74_37	+1	known	missense	c.694	p.E232K	0.695	NULL	pfam_Methyltransf_11,pfam_Methyltransf_12,pfam_UbiE/COQ5_MeTrFase,pfam_Methyltransferase-rel	-	no_errors	KIAA1456	HGNC	ENSG00000250305	tier1	-	-	54	0	0.00	60	17	22.08
KIAA1467	0	genome.wustl.edu	37	12	13221246	13221246	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	13221246	13221246	T	C	SNP	KIAA1467	ENST00000197268	human	ensembl	74_37	+1	known	missense	c.1151	p.V384A	0.999	NULL	superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	KIAA1467	HGNC	ENSG00000084444	tier1	-	-	62	0	0.00	87	16	15.53
KIAA1549	0	genome.wustl.edu	37	7	138603524	138603524	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	138603524	138603524	A	-	DEL	KIAA1549	ENST00000422774	human	ensembl	74_37	-1	known	frame_shift_del	c.848	p.L283fs	0.001	NULL	NULL	-	no_errors	KIAA1549	HGNC	ENSG00000122778	tier1			24	0	0.00	17	6	26.09
KIAA1614	0	genome.wustl.edu	37	1	180885573	180885574	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	180885573	180885574	-	C	INS	KIAA1614	ENST00000367588	human	ensembl	74_37	+1	known	frame_shift_ins	c.334_335	p.K114fs	0.003:0.003	NULL	NULL	-	no_errors	KIAA1614	HGNC	ENSG00000135835	tier1			85	0	0.00	70	24	25.53
KIAA1731	0	genome.wustl.edu	37	11	93433117	93433117	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	93433117	93433117	C	-	DEL	KIAA1731	ENST00000411936	human	ensembl	74_37	+1	known	frame_shift_del	c.5039	p.P1682fs	0.000	NULL	NULL	-	no_errors	KIAA1731	HGNC	ENSG00000166004	tier1			55	0	0.00	38	17	30.91
KIAA1755	0	genome.wustl.edu	37	20	36868084	36868084	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	36868084	36868084	G	-	DEL	KIAA1755	ENST00000279024	human	ensembl	74_37	-1	known	frame_shift_del	c.1593	p.S532fs	0.182	NULL	superfamily_CRAL-TRIO_dom	-	no_errors	KIAA1755	HGNC	ENSG00000149633	tier1			46	0	0.00	26	22	45.83
KIAA1875	0	genome.wustl.edu	37	8	145166383	145166383	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	145166383	145166383	G	A	SNP	KIAA1875	ENST00000323662	human	ensembl	74_37	+1	putative	silent	c.2481	p.P827	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	KIAA1875	HGNC	ENSG00000179698	tier1	-	-	55	0	0.00	38	18	32.14
KIAA1875	0	genome.wustl.edu	37	8	145169722	145169722	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	145169722	145169722	A	G	SNP	KIAA1875	ENST00000323662	human	ensembl	74_37	+1	putative	missense	c.3985	p.M1329V	0.782	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	KIAA1875	HGNC	ENSG00000179698	tier1	-	-	54	0	0.00	49	27	35.53
KIAA2013	0	genome.wustl.edu	37	1	11983512	11983512	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	11983512	11983512	C	T	SNP	KIAA2013	ENST00000376576	human	ensembl	74_37	-1	known	silent	c.1068	p.T356	0.035	pfam_DUF2152	pfam_DUF2152	-	no_errors	KIAA2013	HGNC	ENSG00000116685	tier1	-	-	87	0	0.00	60	45	42.86
KIAA2018	0	genome.wustl.edu	37	3	113374557	113374557	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	113374557	113374557	C	T	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	missense	c.5972	p.R1991H	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542	tier1	-	-	71	0	0.00	32	24	42.86
KIAA2018	0	genome.wustl.edu	37	3	113380090	113380090	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	113380090	113380090	T	-	DEL	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	frame_shift_del	c.439	p.I147fs	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542	tier1			84	0	0.00	61	21	25.61
KIAA2026	0	genome.wustl.edu	37	9	5920370	5920370	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	5920370	5920370	T	-	DEL	KIAA2026	ENST00000399933	human	ensembl	74_37	-1	novel	frame_shift_del	c.5626	p.I1876fs	1.000	NULL	superfamily_Bromodomain	-	no_errors	KIAA2026	HGNC	ENSG00000183354	tier1			78	0	0.00	49	29	37.18
KIAA2026	0	genome.wustl.edu	37	9	5968044	5968044	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	5968044	5968044	T	-	DEL	KIAA2026	ENST00000399933	human	ensembl	74_37	-1	novel	frame_shift_del	c.2187	p.A730fs	1.000	NULL	superfamily_Bromodomain	-	no_errors	KIAA2026	HGNC	ENSG00000183354	tier1			52	0	0.00	33	23	41.07
KIDINS220	0	genome.wustl.edu	37	2	8890414	8890414	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	8890414	8890414	G	-	DEL	KIDINS220	ENST00000256707	human	ensembl	74_37	-1	known	frame_shift_del	c.3242	p.P1081fs	0.969	NULL	pfam_KAP_NTPase,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KIDINS220	HGNC	ENSG00000134313	tier1			25	0	0.00	11	6	35.29
KIF13B	0	genome.wustl.edu	37	8	29035024	29035024	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	29035024	29035024	G	T	SNP	KIF13B	ENST00000524189	human	ensembl	74_37	-1	known	silent	c.792	p.G264	0.851	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_CAP-Gly_domain,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_CAP-Gly_domain,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_CAP-Gly_domain,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13B	HGNC	ENSG00000197892	tier1	-	-	52	0	0.00	60	4	6.25
KIF14	0	genome.wustl.edu	37	1	200586843	200586843	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	200586843	200586843	C	T	SNP	KIF14	ENST00000367350	human	ensembl	74_37	-1	known	missense	c.1009	p.E337K	0.147	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF14	HGNC	ENSG00000118193	tier1	rs147387069	-	107	0	0.00	143	47	24.61
KIF20B	0	genome.wustl.edu	37	10	91497987	91497987	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	91497987	91497987	A	-	DEL	KIF20B	ENST00000416354	human	ensembl	74_37	+1	known	frame_shift_del	c.3479	p.N1162fs	0.300	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF20B	HGNC	ENSG00000138182	tier1			26	0	0.00	21	11	34.38
KIF21A	0	genome.wustl.edu	37	12	39720131	39720131	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	39720131	39720131	A	-	DEL	KIF21A	ENST00000395670	human	ensembl	74_37	-1	known	frame_shift_del	c.3336	p.F1112fs	0.242	NULL	pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_P-loop_NTPase,superfamily_WD40_repeat_dom,superfamily_Prefoldin,superfamily_ARM-type_fold,smart_Kinesin_motor_dom,smart_WD40_repeat,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Kinesin_motor_dom	-	no_errors	KIF21A	HGNC	ENSG00000139116	tier1			17	0	0.00	20	5	20.00
KIF21A	0	genome.wustl.edu	37	12	39726722	39726722	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	39726722	39726722	A	G	SNP	KIF21A	ENST00000395670	human	ensembl	74_37	-1	known	missense	c.2675	p.L892S	1.000	NULL	pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_P-loop_NTPase,superfamily_WD40_repeat_dom,superfamily_Prefoldin,superfamily_ARM-type_fold,smart_Kinesin_motor_dom,smart_WD40_repeat,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Kinesin_motor_dom	-	no_errors	KIF21A	HGNC	ENSG00000139116	tier1	-	-	69	0	0.00	35	17	32.08
KIF21B	0	genome.wustl.edu	37	1	200954050	200954050	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	200954050	200954050	C	T	SNP	KIF21B	ENST00000422435	human	ensembl	74_37	-1	known	missense	c.3740	p.R1247H	1.000	NULL	pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_P-loop_NTPase,superfamily_WD40_repeat_dom,superfamily_Prefoldin,smart_Kinesin_motor_dom,smart_WD40_repeat,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Kinesin_motor_dom	-	no_errors	KIF21B	HGNC	ENSG00000116852	tier1	-	-	67	0	0.00	61	25	29.07
KIF21B	0	genome.wustl.edu	37	1	200956173	200956173	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	200956173	200956173	G	A	SNP	KIF21B	ENST00000422435	human	ensembl	74_37	-1	known	missense	c.3565	p.R1189W	1.000	NULL	pfam_Kinesin_motor_dom,pfam_WD40_repeat,superfamily_P-loop_NTPase,superfamily_WD40_repeat_dom,superfamily_Prefoldin,smart_Kinesin_motor_dom,smart_WD40_repeat,pfscan_Kinesin_motor_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Kinesin_motor_dom	-	no_errors	KIF21B	HGNC	ENSG00000116852	tier1	-	-	58	0	0.00	45	16	26.23
KIF24	0	genome.wustl.edu	37	9	34257623	34257623	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	34257623	34257623	T	-	DEL	KIF24	ENST00000379166	human	ensembl	74_37	-1	known	frame_shift_del	c.1982	p.K661fs	0.000	NULL	pfam_Kinesin_motor_dom,pfam_SAM_type1,superfamily_P-loop_NTPase,superfamily_SAM/pointed,smart_Kinesin_motor_dom,pfscan_SAM,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF24	HGNC	ENSG00000186638	tier1			69	0	0.00	36	23	38.98
KIF26B	0	genome.wustl.edu	37	1	245849621	245849621	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	245849621	245849621	C	T	SNP	KIF26B	ENST00000407071	human	ensembl	74_37	+1	known	silent	c.3336	p.G1112	0.001	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF26B	HGNC	ENSG00000162849				22	0	0.00	40	6	13.04
KIF27	0	genome.wustl.edu	37	9	86452378	86452378	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	86452378	86452378	G	T	SNP	KIF27	ENST00000297814	human	ensembl	74_37	-1	known	silent	c.3744	p.V1248	0.005	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF27	HGNC	ENSG00000165115	tier1	-	-	38	0	0.00	33	4	10.81
KIF27	0	genome.wustl.edu	37	9	86495276	86495276	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	86495276	86495276	C	T	SNP	KIF27	ENST00000297814	human	ensembl	74_37	-1	known	missense	c.2579	p.R860Q	0.998	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF27	HGNC	ENSG00000165115	tier1	rs200952027	-	48	0	0.00	27	5	15.62
KIF3B	0	genome.wustl.edu	37	20	30898271	30898271	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	30898271	30898271	G	A	SNP	KIF3B	ENST00000375712	human	ensembl	74_37	+1	known	missense	c.691	p.D231N	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF3B	HGNC	ENSG00000101350	tier1	-	-	54	0	0.00	30	6	16.67
KIF6	0	genome.wustl.edu	37	6	39513391	39513391	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	39513391	39513391	G	A	SNP	KIF6	ENST00000287152	human	ensembl	74_37	-1	known	missense	c.1255	p.R419C	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF6	HGNC	ENSG00000164627	tier1	-	-	54	0	0.00	28	21	42.86
KIF6	0	genome.wustl.edu	37	6	39580993	39580993	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	39580993	39580993	A	-	DEL	KIF6	ENST00000287152	human	ensembl	74_37	-1	known	frame_shift_del	c.611	p.L204fs	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF6	HGNC	ENSG00000164627	tier1			39	0	0.00	35	18	33.96
KIN	0	genome.wustl.edu	37	10	7801789	7801789	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	7801789	7801789	A	-	DEL	KIN	ENST00000543003	human	ensembl	74_37	-1	known	frame_shift_del	c.865	p.*289fs	0.031	NULL	pfam_DNA/RNA-bd_Kin17_cons_domain	-	no_errors	KIN	HGNC	ENSG00000151657	tier1			27	0	0.00	22	10	31.25
KIR3DL1	0	genome.wustl.edu	37	19	55333053	55333053	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	55333053	55333053	C	T	SNP	KIR3DL1	ENST00000402254	human	ensembl	74_37	+1	known	missense	c.689	p.P230L	0.001	smart_Ig_sub	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR3DL1	HGNC	ENSG00000167633	tier1	-	-	131	0	0.00	58	63	52.07
KIR3DL1	0	genome.wustl.edu	37	19	55340914	55340914	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	55340914	55340914	A	-	DEL	KIR3DL1	ENST00000391728	human	ensembl	74_37	+1	known	frame_shift_del	c.1099	p.N369fs	0.004	NULL	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR3DL1	HGNC	ENSG00000167633	tier1			238	0	0.00	129	64	33.16
KIRREL	0	genome.wustl.edu	37	1	158054356	158054356	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	158054356	158054356	C	T	SNP	KIRREL	ENST00000368173	human	ensembl	74_37	+1	known	missense	c.497	p.A166V	0.989	pfam_CD80_C2-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL	HGNC	ENSG00000183853	tier1	-	-	67	0	0.00	41	13	23.64
KIRREL	0	genome.wustl.edu	37	1	158064153	158064153	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	158064153	158064153	C	T	SNP	KIRREL	ENST00000368173	human	ensembl	74_37	+1	known	silent	c.1818	p.I606	0.270	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL	HGNC	ENSG00000183853	tier1	-	-	28	0	0.00	35	15	30.00
KIRREL3	0	genome.wustl.edu	37	11	126299148	126299148	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	126299148	126299148	G	A	SNP	KIRREL3	ENST00000525144	human	ensembl	74_37	-1	known	nonsense	c.1732	p.R578*	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	KIRREL3	HGNC	ENSG00000149571	tier1	-	-	64	0	0.00	37	22	36.67
KIT	0	genome.wustl.edu	37	4	55561889	55561889	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	55561889	55561889	C	T	SNP	KIT	ENST00000288135	human	ensembl	74_37	+1	known	silent	c.279	p.G93	0.995	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,smart_Ig_sub	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	KIT	HGNC	ENSG00000157404	tier1	-	-	31	0	0.00	21	18	46.15
KITLG	0	genome.wustl.edu	37	12	88900860	88900860	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	88900860	88900860	A	G	SNP	KITLG	ENST00000228280	human	ensembl	74_37	-1	known	missense	c.659	p.L220S	0.961	pfam_SCF,pirsf_SCF	pfam_SCF,superfamily_4_helix_cytokine-like_core,pirsf_SCF	-	no_errors	KITLG	HGNC	ENSG00000049130	tier1	-	-	30	0	0.00	28	12	30.00
KLF13	0	genome.wustl.edu	37	15	31669829	31669830	+	RNA	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	31669829	31669830	-	T	INS	KLF13	ENST00000558673	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.009:0.003	-	-	-	no_errors	KLF13	HGNC	ENSG00000169926	tier1			77	0	0.00	61	24	28.24
KLF15	0	genome.wustl.edu	37	3	126070691	126070691	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	126070691	126070691	C	T	SNP	KLF15	ENST00000296233	human	ensembl	74_37	-1	known	missense	c.1075	p.G359S	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF15	HGNC	ENSG00000163884	tier1	-	-	77	0	0.00	31	21	40.38
KLF17	0	genome.wustl.edu	37	1	44595030	44595030	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	44595030	44595030	C	T	SNP	KLF17	ENST00000372299	human	ensembl	74_37	+1	known	silent	c.87	p.N29	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF17	HGNC	ENSG00000171872	tier1	-	-	41	0	0.00	31	15	32.61
KLF3	0	genome.wustl.edu	37	4	38690459	38690460	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	38690459	38690460	-	A	INS	KLF3	ENST00000261438	human	ensembl	74_37	+1	known	frame_shift_ins	c.311_312	p.Y107fs	0.010:0.008	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF3	HGNC	ENSG00000109787	tier1			47	0	0.00	35	14	28.57
KLF3	0	genome.wustl.edu	37	4	38690460	38690460	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	38690460	38690460	A	-	DEL	KLF3	ENST00000261438	human	ensembl	74_37	+1	known	frame_shift_del	c.312	p.K106fs	0.008	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF3	HGNC	ENSG00000109787	tier1			46	0	0.00	33	16	32.65
KLF3	0	genome.wustl.edu	37	4	38690547	38690547	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	38690547	38690547	G	A	SNP	KLF3	ENST00000261438	human	ensembl	74_37	+1	known	silent	c.399	p.R133	0.894	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF3	HGNC	ENSG00000109787	tier1	-	-	66	0	0.00	37	22	37.29
KLF7	0	genome.wustl.edu	37	2	207945785	207945786	+	RNA	INS	-	-	TGTG			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	207945785	207945786	-	TGTG	INS	KLF7	ENST00000467833	human	ensembl	74_37	-1	putative	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	KLF7	HGNC	ENSG00000118263	tier1			34	0	0.00	50	15	23.08
KLHL17	0	genome.wustl.edu	37	1	900526	900526	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	900526	900526	G	A	SNP	KLHL17	ENST00000338591	human	ensembl	74_37	+1	known	silent	c.1884	p.P628	0.000	pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL17	HGNC	ENSG00000187961	tier1	rs146302352	-	167	0	0.00	75	45	37.19
KLHL29	0	genome.wustl.edu	37	2	23785143	23785143	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	23785143	23785143	C	T	SNP	KLHL29	ENST00000486442	human	ensembl	74_37	+1	known	missense	c.77	p.T26M	0.954	NULL	pfam_Kelch_1,pfam_BACK,pfam_Kelch_2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL29	HGNC	ENSG00000119771	tier1	-	-	73	0	0.00	38	19	33.33
KLHL38	0	genome.wustl.edu	37	8	124664405	124664405	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	124664405	124664405	G	T	SNP	KLHL38	ENST00000325995	human	ensembl	74_37	-1	known	silent	c.762	p.T254	0.000	pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL38	HGNC	ENSG00000175946				40	0	0.00	52	3	5.45
KLHL41	0	genome.wustl.edu	37	2	170366496	170366496	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	170366496	170366496	A	-	DEL	KLHL41	ENST00000284669	human	ensembl	74_37	+1	known	frame_shift_del	c.208	p.K72fs	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL41	HGNC	ENSG00000239474	tier1			33	0	0.00	29	14	32.56
KLHL42	0	genome.wustl.edu	37	12	27950769	27950769	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	27950769	27950769	G	-	DEL	KLHL42	ENST00000381271	human	ensembl	74_37	+1	known	frame_shift_del	c.1188	p.C399fs	0.988	NULL	pfam_Kelch_1,pfam_BACK,superfamily_BTB/POZ_fold,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL42	HGNC	ENSG00000087448	tier1			41	0	0.00	51	21	29.17
KLHL7	0	genome.wustl.edu	37	7	23180534	23180534	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	23180534	23180534	G	T	SNP	KLHL7	ENST00000339077	human	ensembl	74_37	+1	known	missense	c.589	p.D197Y	1.000	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL7	HGNC	ENSG00000122550	tier1	-	-	42	0	0.00	67	4	5.63
KLRD1	0	genome.wustl.edu	37	12	10466007	10466007	+	Splice_Site	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	10466007	10466007	A	G	SNP	KLRD1	ENST00000336164	human	ensembl	74_37	+1	known	splice_site	c.316-2	e5-2	0.324	-	-	-	no_errors	KLRD1	HGNC	ENSG00000134539	tier1	-	-	45	0	0.00	44	19	30.16
KMT2B	0	genome.wustl.edu	37	19	36210763	36210764	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	36210763	36210764	-	CC	INS	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	frame_shift_ins	c.514_515	p.K175fs	0.976:0.976	pirsf_MeTrfase_trithorax	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333	tier1			55	0	0.00	37	17	31.48
KMT2B	0	genome.wustl.edu	37	19	36229256	36229256	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	36229256	36229256	G	A	SNP	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	missense	c.7946	p.R2649H	1.000	pirsf_MeTrfase_trithorax,pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333	tier1	-	-	24	0	0.00	7	6	46.15
KMT2B	0	genome.wustl.edu	37	19	36210771	36210771	+	Silent	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	36210771	36210771	A	C	SNP	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	silent	c.522	p.P174	1.000	pirsf_MeTrfase_trithorax	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333				57	0	0.00	53	4	7.02
KPNA3	0	genome.wustl.edu	37	13	50279819	50279819	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	50279819	50279819	T	-	DEL	KPNA3	ENST00000261667	human	ensembl	74_37	-1	known	frame_shift_del	c.1310	p.N437fs	1.000	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,pfam_Importin-a_IBB,pfam_HEAT,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA3	HGNC	ENSG00000102753	tier1			61	0	0.00	65	52	44.44
KRI1	0	genome.wustl.edu	37	19	10668530	10668530	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	10668530	10668530	C	T	SNP	KRI1	ENST00000312962	human	ensembl	74_37	-1	known	silent	c.1419	p.K473	0.003	pfam_KRR1-interact_protein_1	pfam_KRR1-interact_protein_1	-	no_errors	KRI1	HGNC	ENSG00000129347	tier1	-	-	42	0	0.00	31	10	24.39
KRT10	0	genome.wustl.edu	37	17	38976864	38976864	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	38976864	38976864	G	A	SNP	KRT10	ENST00000269576	human	ensembl	74_37	-1	known	missense	c.766	p.R256C	1.000	pfam_IF,prints_Keratin_I	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT10	HGNC	ENSG00000186395	tier1	-	-	74	0	0.00	83	7	7.78
KRT33A	0	genome.wustl.edu	37	17	39506827	39506827	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	39506827	39506827	C	T	SNP	KRT33A	ENST00000007735	human	ensembl	74_37	-1	known	missense	c.193	p.D65N	1.000	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT33A	HGNC	ENSG00000006059	tier1	-	-	147	0	0.00	87	50	36.23
KRT6B	0	genome.wustl.edu	37	12	52841135	52841135	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	52841135	52841135	C	A	SNP	KRT6B	ENST00000252252	human	ensembl	74_37	-1	known	nonsense	c.1534	p.G512*	0.979	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6B	HGNC	ENSG00000185479	tier1	-	-	95	0	0.00	69	7	9.21
KRT74	0	genome.wustl.edu	37	12	52967393	52967393	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	52967393	52967393	G	A	SNP	KRT74	ENST00000305620	human	ensembl	74_37	-1	known	missense	c.169	p.R57W	0.000	NULL	pfam_IF,prints_Keratin_II	-	no_errors	KRT74	HGNC	ENSG00000170484				56	0	0.00	66	4	5.71
KRT9	0	genome.wustl.edu	37	17	39728172	39728172	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	39728172	39728172	C	T	SNP	KRT9	ENST00000246662	human	ensembl	74_37	-1	known	missense	c.73	p.G25R	0.052	NULL	pfam_IF,prints_Keratin_I	-	no_errors	KRT9	HGNC	ENSG00000171403				12	0	0.00	12	3	20.00
KRTAP10-2	0	genome.wustl.edu	37	21	45970364	45970364	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	45970364	45970364	C	T	SNP	KRTAP10-2	ENST00000498210	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	KRTAP10-2	HGNC	ENSG00000205445	tier1	-	-	79	0	0.00	46	23	33.33
KRTAP16-1	0	genome.wustl.edu	37	17	39464111	39464111	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	39464111	39464111	T	-	DEL	KRTAP16-1	ENST00000391352	human	ensembl	74_37	-1	known	frame_shift_del	c.1395	p.K465fs	0.028	NULL	NULL	-	no_errors	KRTAP16-1	HGNC	ENSG00000212657	tier1			36	0	0.00	18	12	40.00
KRTAP22-2	0	genome.wustl.edu	37	21	31962612	31962612	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	31962612	31962612	A	G	SNP	KRTAP22-2	ENST00000382830	human	ensembl	74_37	-1	known	missense	c.82	p.C28R	0.000	NULL	NULL	-	no_errors	KRTAP22-2	HGNC	ENSG00000206106	tier1	-	-	42	0	0.00	38	21	35.59
KRTAP4-3	0	genome.wustl.edu	37	17	39324124	39324124	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	39324124	39324124	G	A	SNP	KRTAP4-3	ENST00000391356	human	ensembl	74_37	-1	known	missense	c.301	p.R101C	0.012	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-3	HGNC	ENSG00000196156	tier1	-	-	234	0	0.00	129	83	39.15
KSR2	0	genome.wustl.edu	37	12	117964887	117964887	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	117964887	117964887	G	T	SNP	KSR2	ENST00000339824	human	ensembl	74_37	-1	known	missense	c.1840	p.P614T	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	KSR2	HGNC	ENSG00000171435	tier1	-	-	51	0	0.00	48	4	7.69
L2HGDH	0	genome.wustl.edu	37	14	50735881	50735881	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	50735881	50735881	C	T	SNP	L2HGDH	ENST00000267436	human	ensembl	74_37	-1	known	silent	c.906	p.P302	1.000	pfam_FAD-dep_OxRdtase	pfam_FAD-dep_OxRdtase	-	no_errors	L2HGDH	HGNC	ENSG00000087299	tier1	rs144701373	-	36	0	0.00	22	12	35.29
LACE1	0	genome.wustl.edu	37	6	108840979	108840979	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	108840979	108840979	G	T	SNP	LACE1	ENST00000368977	human	ensembl	74_37	+1	known	missense	c.1283	p.S428I	1.000	NULL	pfam_ATPase_AFG1-like,superfamily_P-loop_NTPase	-	no_errors	LACE1	HGNC	ENSG00000135537				39	0	0.00	69	4	5.48
LAD1	0	genome.wustl.edu	37	1	201355590	201355590	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	201355590	201355590	C	-	DEL	LAD1	ENST00000367313	human	ensembl	74_37	-1	known	frame_shift_del	c.941	p.G314fs	0.000	pirsf_Ladinin_1	pirsf_Ladinin_1	-	no_errors	LAD1	HGNC	ENSG00000159166	tier1			114	0	0.00	97	31	24.22
LAMA1	0	genome.wustl.edu	37	18	6948545	6948545	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	6948545	6948545	C	A	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.8567	p.S2856I	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	98	0	0.00	59	46	43.81
LAMA1	0	genome.wustl.edu	37	18	6961668	6961668	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	6961668	6961668	C	T	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.7543	p.A2515T	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	40	0	0.00	22	13	37.14
LAMA1	0	genome.wustl.edu	37	18	7049079	7049079	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	7049079	7049079	G	A	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.766	p.R256C	0.998	pfam_Laminin_N,smart_Laminin_N,pfscan_Laminin_N	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	rs150637419	-	50	0	0.00	27	13	32.50
LAMA5	0	genome.wustl.edu	37	20	60888272	60888272	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	60888272	60888272	C	T	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.8827	p.G2943S	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	tier1	-	-	45	0	0.00	43	16	27.12
LAMA5	0	genome.wustl.edu	37	20	60895716	60895716	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	60895716	60895716	G	A	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.6658	p.R2220W	0.996	pfam_Laminin_I	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702				38	0	0.00	14	9	39.13
LAMB2	0	genome.wustl.edu	37	3	49163123	49163123	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	49163123	49163123	A	G	SNP	LAMB2	ENST00000464891	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	LAMB2	HGNC	ENSG00000172037	tier1	-	-	56	0	0.00	18	12	40.00
LAMB4	0	genome.wustl.edu	37	7	107703340	107703340	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	107703340	107703340	G	A	SNP	LAMB4	ENST00000205386	human	ensembl	74_37	-1	known	missense	c.3161	p.P1054L	0.158	pfam_EGF_laminin,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB4	HGNC	ENSG00000091128	tier1	-	-	34	0	0.00	25	12	32.43
LAMC2	0	genome.wustl.edu	37	1	183196723	183196723	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	183196723	183196723	G	A	SNP	LAMC2	ENST00000264144	human	ensembl	74_37	+1	known	silent	c.1359	p.P453	0.001	smart_EG-like_dom	pfam_EGF_laminin,pfam_Laminin_B_type_IV,superfamily_Growth_fac_rcpt_N_dom,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin	-	no_errors	LAMC2	HGNC	ENSG00000058085	tier1	-	-	60	0	0.00	46	15	24.59
LAMC3	0	genome.wustl.edu	37	9	133936593	133936594	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	133936593	133936594	-	C	INS	LAMC3	ENST00000361069	human	ensembl	74_37	+1	known	frame_shift_ins	c.2330_2331	p.G781fs	1.000:1.000	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_B_type_IV,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC3	HGNC	ENSG00000050555	tier1			47	0	0.00	19	8	29.63
LAMC3	0	genome.wustl.edu	37	9	133946903	133946903	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	133946903	133946903	G	T	SNP	LAMC3	ENST00000361069	human	ensembl	74_37	+1	known	silent	c.3102	p.T1034	1.000	NULL	pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_B_type_IV,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMC3	HGNC	ENSG00000050555	tier1	-	-	74	0	0.00	44	21	32.31
LARP1	0	genome.wustl.edu	37	5	154173390	154173390	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	154173390	154173390	C	-	DEL	LARP1	ENST00000336314	human	ensembl	74_37	+1	known	frame_shift_del	c.668	p.T226fs	0.999	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,smart_DM15,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP1	HGNC	ENSG00000155506	tier1			77	0	0.00	42	19	31.15
LARP6	0	genome.wustl.edu	37	15	71125091	71125091	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	71125091	71125091	G	A	SNP	LARP6	ENST00000299213	human	ensembl	74_37	-1	known	missense	c.776	p.A259V	1.000	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd,prints_Lupus_La	-	no_errors	LARP6	HGNC	ENSG00000166173	tier1	-	-	52	0	0.00	25	9	26.47
LATS1	0	genome.wustl.edu	37	6	149983001	149983001	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	149983001	149983001	T	A	SNP	LATS1	ENST00000253339	human	ensembl	74_37	-1	known	missense	c.3257	p.D1086V	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,pfam_UBA/Ts_N,superfamily_Kinase-like_dom,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	LATS1	HGNC	ENSG00000131023	tier1	-	-	108	0	0.00	78	42	35.00
LBH	0	genome.wustl.edu	37	2	30480657	30480658	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	30480657	30480658	TT	-	DEL	LBH	ENST00000467242	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.930:0.934	-	-	-	no_errors	LBH	HGNC	ENSG00000213626	tier1			39	0	0.00	22	9	29.03
LBR	0	genome.wustl.edu	37	1	225592358	225592358	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	225592358	225592358	G	T	SNP	LBR	ENST00000272163	human	ensembl	74_37	-1	known	silent	c.1534	p.R512	1.000	pfam_Ergosterol_biosynth_ERG4_ERG24,pfam_DUF1295	pfam_Ergosterol_biosynth_ERG4_ERG24,pfam_Lamin-B_rcpt_of_tudor,pfam_DUF1295,smart_Tudor	-	no_errors	LBR	HGNC	ENSG00000143815	tier1	-	-	42	0	0.00	60	4	6.25
LCN2	0	genome.wustl.edu	37	9	130914272	130914272	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	130914272	130914272	A	-	DEL	LCN2	ENST00000372998	human	ensembl	74_37	+1	known	frame_shift_del	c.449	p.N151fs	0.000	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_N_gelatinase,prints_PstgldnD_synth,prints_Lipocalin,prints_A1-microglobln	-	no_errors	LCN2	HGNC	ENSG00000148346	tier1			23	0	0.00	20	11	35.48
LCNL1	0	genome.wustl.edu	37	9	139879317	139879317	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	139879317	139879317	G	T	SNP	LCNL1	ENST00000408973	human	ensembl	74_37	+1	known	missense	c.349	p.G117W	0.000	superfamily_Calycin-like	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like	-	no_errors	LCNL1	HGNC	ENSG00000214402	tier1	-	-	141	0	0.00	99	9	8.33
LEPROTL1	0	genome.wustl.edu	37	8	29961841	29961841	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	29961841	29961841	T	-	DEL	LEPROTL1	ENST00000523116	human	ensembl	74_37	+1	known	frame_shift_del	c.118	p.Y42fs	1.000	pfam_VPS55	pfam_VPS55	-	no_errors	LEPROTL1	HGNC	ENSG00000104660	tier1			80	0	0.00	101	38	27.34
LETMD1	0	genome.wustl.edu	37	12	51445997	51445997	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	51445997	51445997	G	A	SNP	LETMD1	ENST00000418425	human	ensembl	74_37	+1	novel	missense	c.397	p.A133T	0.802	pfam_LETM1	pfam_LETM1	-	no_errors	LETMD1	HGNC	ENSG00000050426	tier1	-	-	63	0	0.00	48	31	39.24
LGR6	0	genome.wustl.edu	37	1	202287187	202287187	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	202287187	202287187	G	A	SNP	LGR6	ENST00000367278	human	ensembl	74_37	+1	known	missense	c.1756	p.V586M	0.516	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn	pfam_Leu-rich_rpt,pfam_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn	-	no_errors	LGR6	HGNC	ENSG00000133067	tier1	rs143028945	-	82	0	0.00	101	25	19.84
LHX4	0	genome.wustl.edu	37	1	180243372	180243372	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	180243372	180243372	G	-	DEL	LHX4	ENST00000263726	human	ensembl	74_37	+1	known	frame_shift_del	c.831	p.D279fs	1.000	NULL	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX4	HGNC	ENSG00000121454	tier1			59	0	0.00	53	17	24.29
LILRA3	0	genome.wustl.edu	37	19	54802012	54802012	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	54802012	54802012	C	T	SNP	LILRA3	ENST00000251390	human	ensembl	74_37	-1	known	silent	c.1176	p.A392	0.347	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	-	no_errors	LILRA3	HGNC	ENSG00000170866	tier1	rs149110195	-	190	0	0.00	107	70	39.55
LILRA4	0	genome.wustl.edu	37	19	54844919	54844919	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	54844919	54844919	G	-	DEL	LILRA4	ENST00000291759	human	ensembl	74_37	-1	known	frame_shift_del	c.1424	p.P475fs	0.004	pirsf_A1B_glyco/leuk_Ig-like_rcpt	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	-	no_errors	LILRA4	HGNC	ENSG00000239961	tier1			108	0	0.00	57	21	26.92
LILRA4	0	genome.wustl.edu	37	19	54848276	54848276	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	54848276	54848276	G	-	DEL	LILRA4	ENST00000291759	human	ensembl	74_37	-1	known	frame_shift_del	c.1091	p.P364fs	0.001	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pirsf_A1B_glyco/leuk_Ig-like_rcpt,pfscan_Ig-like_dom	-	no_errors	LILRA4	HGNC	ENSG00000239961	tier1			200	0	0.00	102	62	37.80
LILRB5	0	genome.wustl.edu	37	19	54759311	54759311	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	54759311	54759311	C	T	SNP	LILRB5	ENST00000450632	human	ensembl	74_37	-1	known	missense	c.763	p.V255I	0.001	smart_Ig_sub,smart_Ig_sub2	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB5	HGNC	ENSG00000105609	tier1	-	-	111	0	0.00	54	42	43.75
LIMCH1	0	genome.wustl.edu	37	4	41634825	41634825	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	41634825	41634825	C	T	SNP	LIMCH1	ENST00000503057	human	ensembl	74_37	+1	known	missense	c.1661	p.P554L	0.000	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LIMCH1	HGNC	ENSG00000064042	tier1	-	-	86	0	0.00	57	38	40.00
LINC00052	0	genome.wustl.edu	37	15	88121520	88121521	+	RNA	DEL	TC	TC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	88121520	88121521	TC	-	DEL	LINC00052	ENST00000560153	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.018:0.021	-	-	-	no_errors	LINC00052	HGNC	ENSG00000259527	tier1			58	0	0.00	27	16	37.21
LINC00461	0	genome.wustl.edu	37	5	87969079	87969079	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	87969079	87969079	A	-	DEL	LINC00461	ENST00000505030	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.276	-	-	-	no_errors	LINC00461	HGNC	ENSG00000245526	tier1			52	0	0.00	42	15	26.32
LINC00477	0	genome.wustl.edu	37	12	24736735	24736735	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	24736735	24736735	A	-	DEL	LINC00477	ENST00000483544	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.092	-	-	-	no_errors	LINC00477	HGNC	ENSG00000197503	tier1			33	0	0.00	15	48	76.19
LINC00488	0	genome.wustl.edu	37	3	108897049	108897049	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	108897049	108897049	G	-	DEL	LINC00488	ENST00000494582	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.115	-	-	-	no_errors	LINC00488	HGNC	ENSG00000214381	tier1			71	0	0.00	24	16	40.00
LINC00610	0	genome.wustl.edu	37	11	36293077	36293077	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	36293077	36293077	C	T	SNP	LINC00610	ENST00000355500	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00610	HGNC	ENSG00000196559	tier1	-	-	44	0	0.00	18	13	41.94
LINC00615	0	genome.wustl.edu	37	12	91340253	91340253	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	91340253	91340253	T	-	DEL	LINC00615	ENST00000546725	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.148	-	-	-	no_errors	LINC00615	HGNC	ENSG00000196243	tier1			23	0	0.00	7	7	50.00
LINC00634	0	genome.wustl.edu	37	22	42354516	42354516	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	42354516	42354516	G	0	DEL	LINC00634	ENST00000381348	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LINC00634	HGNC	ENSG00000205704				15	0	0.00	5	5	50.00
LINC00862	0	genome.wustl.edu	37	1	200311674	200311674	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	200311674	200311674	C	-	DEL	LINC00862	ENST00000367355	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.026	-	-	-	no_errors	LINC00862	HGNC	ENSG00000203721	tier1			19	0	0.00	22	11	33.33
LINC00862	0	genome.wustl.edu	37	1	200311673	200311674	+	RNA	DEL	AC	AC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	200311673	200311674	AC	0	DEL	LINC00862	ENST00000367355	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.022:0.026	-	-	-	no_errors	LINC00862	HGNC	ENSG00000203721				19	0	0.00	32	9	21.95
LINC00910	0	genome.wustl.edu	37	17	41465839	41465839	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	41465839	41465839	G	-	DEL	LINC00910	ENST00000341011	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00910	HGNC	ENSG00000188825	tier1			52	0	0.00	28	15	34.88
LINC00937	0	genome.wustl.edu	37	12	8549046	8549046	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	8549046	8549046	G	A	SNP	LINC00937	ENST00000538304	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.428	-	-	-	no_errors	LINC00937	HGNC	ENSG00000226091	tier1	-	-	33	0	0.00	7	42	85.71
LINC00943	0	genome.wustl.edu	37	12	127229809	127229809	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	127229809	127229809	T	-	DEL	LINC00943	ENST00000345111	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	LINC00943	HGNC	ENSG00000189238	tier1			37	0	0.00	23	6	20.69
LINC00982	0	genome.wustl.edu	37	1	2979350	2979350	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	2979350	2979350	G	T	SNP	LINC00982	ENST00000321399	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LINC00982	HGNC	ENSG00000177133	tier1	-	-	84	0	0.00	44	44	50.00
LINC00982	0	genome.wustl.edu	37	1	2984123	2984123	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	2984123	2984123	G	T	SNP	LINC00982	ENST00000321336	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00982	HGNC	ENSG00000177133	tier1	-	-	22	0	0.00	4	10	71.43
LIPF	0	genome.wustl.edu	37	10	90429680	90429680	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	90429680	90429680	G	T	SNP	LIPF	ENST00000394375	human	ensembl	74_37	+1	known	missense	c.539	p.G180V	1.000	pfam_AB_hydrolase_1	pfam_AB_hydrolase_lipase,pfam_AB_hydrolase_1	-	no_errors	LIPF	HGNC	ENSG00000182333	tier1	-	-	69	0	0.00	84	5	5.56
LIPF	0	genome.wustl.edu	37	10	90438259	90438259	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	90438259	90438259	G	T	SNP	LIPF	ENST00000394375	human	ensembl	74_37	+1	known	missense	c.1048	p.G350C	0.860	pfam_AB_hydrolase_1	pfam_AB_hydrolase_lipase,pfam_AB_hydrolase_1	-	no_errors	LIPF	HGNC	ENSG00000182333	tier1	-	-	145	0	0.00	81	44	35.20
LLGL2	0	genome.wustl.edu	37	17	73560612	73560612	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	73560612	73560612	G	A	SNP	LLGL2	ENST00000375227	human	ensembl	74_37	+1	known	missense	c.1060	p.A354T	0.000	NULL	pfam_LLGL2,superfamily_WD40_repeat_dom,prints_Lethal2_giant	-	no_errors	LLGL2	HGNC	ENSG00000073350	tier1	-	-	152	0	0.00	55	36	39.56
LLGL2	0	genome.wustl.edu	37	17	73565329	73565329	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	73565329	73565329	G	T	SNP	LLGL2	ENST00000392550	human	ensembl	74_37	+1	known	missense	c.1504	p.D502Y	1.000	superfamily_WD40_repeat_dom	pfam_LLGL2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,prints_Lethal2_giant	-	no_errors	LLGL2	HGNC	ENSG00000073350				66	0	0.00	56	3	5.08
LMAN1	0	genome.wustl.edu	37	18	57013285	57013285	+	Splice_Site	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	57013285	57013285	T	-	DEL	LMAN1	ENST00000251047	human	ensembl	74_37	-1	known	splice_site_del	c.823-2	e8-2	1.000	-	-	-	no_errors	LMAN1	HGNC	ENSG00000074695	tier1			31	0	0.00	24	12	33.33
LMLN	0	genome.wustl.edu	37	3	197748396	197748396	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	197748396	197748396	C	A	SNP	LMLN	ENST00000330198	human	ensembl	74_37	+1	known	missense	c.1445	p.P482H	1.000	pfam_Peptidase_M8	pfam_Peptidase_M8	-	no_errors	LMLN	HGNC	ENSG00000185621	tier1	-	-	27	0	0.00	25	28	52.83
LMNA	0	genome.wustl.edu	37	1	156106205	156106205	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	156106205	156106205	G	A	SNP	LMNA	ENST00000368300	human	ensembl	74_37	+1	known	missense	c.1358	p.R453Q	1.000	pfam_Lamin_tail_dom	pfam_IF,pfam_Lamin_tail_dom,superfamily_Prefoldin	-	no_errors	LMNA	HGNC	ENSG00000160789	tier1	-	-	122	0	0.00	106	7	6.14
LMNB2	0	genome.wustl.edu	37	19	2434830	2434830	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	2434830	2434830	G	A	SNP	LMNB2	ENST00000325327	human	ensembl	74_37	-1	known	missense	c.937	p.R313C	0.942	pfam_IF	pfam_IF,pfam_Lamin_tail_dom,superfamily_Prefoldin	-	no_errors	LMNB2	HGNC	ENSG00000176619	tier1	-	-	25	0	0.00	13	12	48.00
LOC100128006	0	genome.wustl.edu	37	17	12666295	12666295	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	12666295	12666295	G	A	SNP	LOC100128006	ENST00000584772	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-1090M7.1	Clone_based_vega_gene	ENSG00000265489	tier1	-	-	11	0	0.00	9	8	47.06
LOC100128374	0	genome.wustl.edu	37	7	1885537	1885537	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	1885537	1885537	C	A	SNP	LOC100128374	ENST00000480694	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC110781.3	Clone_based_vega_gene	ENSG00000176349	tier1	-	-	49	0	0.00	21	17	44.74
LOC100128714	0	genome.wustl.edu	37	15	26147715	26147715	+	Splice_Site	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	26147715	26147715	T	C	SNP	LOC100128714	ENST00000383019	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	0.000	-	-	-	no_errors	RP11-1084I9.1	Clone_based_vega_gene	ENSG00000206187	tier1	-	-	21	0	0.00	10	6	35.29
LOC100129029	0	genome.wustl.edu	37	2	159516742	159516742	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	159516742	159516742	C	T	SNP	LOC100129029	ENST00000342892	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC005042.4	Clone_based_vega_gene	ENSG00000204380	tier1	-	-	25	0	0.00	19	14	42.42
LOC100129138	0	genome.wustl.edu	37	1	104615648	104615648	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	104615648	104615648	C	T	SNP	LOC100129138	ENST00000418362	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.975	-	-	-	no_errors	RP11-364B6.1	Clone_based_vega_gene	ENSG00000215869	tier1	-	-	8	0	0.00	11	4	26.67
LOC100130331	0	genome.wustl.edu	37	1	238090646	238090646	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	238090646	238090646	C	A	SNP	LOC100130331	ENST00000450451	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-193H5.1	Clone_based_vega_gene	ENSG00000237250	tier1	-	-	48	0	0.00	20	10	33.33
LOC100131825	0	genome.wustl.edu	37	1	159166613	159166613	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	159166613	159166613	T	-	DEL	LOC100131825	ENST00000415675	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTA-134P22.2	Clone_based_vega_gene	ENSG00000225670	tier1			23	0	0.00	11	9	45.00
LOC100134368	0	genome.wustl.edu	37	16	436712	436714	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	436712	436714	AAA	-	DEL	LOC100134368	ENST00000457760	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001:0.000	-	-	-	no_errors	Z97634.3	Clone_based_vega_gene	ENSG00000236829	tier1			10	0	0.00	7	4	36.36
LOC100288175	0	genome.wustl.edu	37	1	998558	998558	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	998558	998558	G	-	DEL	LOC100288175	ENST00000394517	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.500	-	-	-	no_errors	RP11-465B22.3	Clone_based_vega_gene	ENSG00000217801	tier1			91	0	0.00	43	28	39.44
LOC100289283	0	genome.wustl.edu	37	16	29821984	29821986	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	29821984	29821986	TTT	-	DEL	LOC100289283	ENST00000569981	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.004:0.969	-	-	-	no_errors	AC009133.14	Clone_based_vega_gene	ENSG00000238045	tier1			49	0	0.00	22	10	31.25
LOC100294362	0	genome.wustl.edu	37	17	78326965	78326965	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	78326965	78326965	G	A	SNP	LOC100294362	ENST00000575034	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2047H16.4	Clone_based_vega_gene	ENSG00000263069	tier1	-	-	38	0	0.00	23	13	36.11
LOC100506060	0	genome.wustl.edu	37	16	70253647	70253647	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	70253647	70253647	G	A	SNP	LOC100506060	ENST00000573141	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-296I10.6	Clone_based_vega_gene	ENSG00000261556	tier1	-	-	24	0	0.00	54	16	22.86
LOC100506710	0	genome.wustl.edu	37	9	37080331	37080331	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	37080331	37080331	C	A	SNP	LOC100506710	ENST00000429493	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-220I1.1	Clone_based_vega_gene	ENSG00000233137	tier1	-	-	85	0	0.00	41	17	29.31
LOC100631378	0	genome.wustl.edu	37	19	38324095	38324095	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	38324095	38324095	G	T	SNP	LOC100631378	ENST00000433142	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC016582.2	Clone_based_vega_gene	ENSG00000225868				46	0	0.00	43	3	6.52
LOC101927051	0	genome.wustl.edu	37	22	38038868	38038868	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	38038868	38038868	G	A	SNP	LOC101927051	ENST00000456099	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	Z83844.1	Clone_based_vega_gene	ENSG00000233360	tier1	-	-	69	0	0.00	37	25	40.32
LOC101927188	0	genome.wustl.edu	37	18	6956263	6956265	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	6956263	6956265	TTT	-	DEL	LOC101927188	ENST00000584722	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.001:0.000	-	-	-	no_errors	RP11-781P6.1	Clone_based_vega_gene	ENSG00000265069	tier1			13	0	0.00	5	4	44.44
LOC101927599	0	genome.wustl.edu	37	19	37068397	37068399	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	37068397	37068399	TTT	-	DEL	LOC101927599	ENST00000448373	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.124:0.125:0.126	-	-	-	no_errors	AC092295.7	Clone_based_vega_gene	ENSG00000233527	tier1			32	0	0.00	17	2	10.53
LOC101928780	0	genome.wustl.edu	37	19	54628061	54628061	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	54628061	54628061	C	-	DEL	LOC101928780	ENST00000452097	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC012314.8	Clone_based_vega_gene	ENSG00000237017	tier1			88	0	0.00	44	22	33.33
LOC101928781	0	genome.wustl.edu	37	10	63212571	63212571	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	63212571	63212571	G	A	SNP	LOC101928781	ENST00000389640	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-809M12.1	Clone_based_vega_gene	ENSG00000237233	tier1	-	-	18	0	0.00	20	8	28.57
LOC101928930	0	genome.wustl.edu	37	12	54474095	54474095	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	54474095	54474095	C	T	SNP	LOC101928930	ENST00000505259	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-834C11.7	Clone_based_vega_gene	ENSG00000250654	tier1	-	-	34	0	0.00	16	12	41.38
LOC101929290	0	genome.wustl.edu	37	8	11177526	11177529	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	11177526	11177529	TTTT	-	DEL	LOC101929290	ENST00000498997	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005:0.001:0.000:0.000	-	-	-	no_errors	AF131216.6	Clone_based_vega_gene	ENSG00000246477	tier1			22	0	0.00	28	9	24.32
LOC101929438	0	genome.wustl.edu	37	1	144520891	144520891	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	144520891	144520891	C	T	SNP	LOC101929438	ENST00000411760	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-640M9.1	Clone_based_vega_gene	ENSG00000236943	tier1	-	-	75	0	0.00	10	49	83.05
LOC101929948	0	genome.wustl.edu	37	14	19563232	19563232	+	RNA	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	19563232	19563232	T	C	SNP	LOC101929948	ENST00000548748	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.050	-	-	-	no_errors	CTD-2311B13.5	Clone_based_vega_gene	ENSG00000258252	tier1	-	-	43	0	0.00	38	47	55.29
LOC283335	0	genome.wustl.edu	37	12	53447261	53447261	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	53447261	53447261	A	G	SNP	LOC283335	ENST00000546793	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-983P16.4	Clone_based_vega_gene	ENSG00000257337	tier1	-	-	41	0	0.00	14	9	39.13
LOC283683	0	genome.wustl.edu	37	15	23108668	23108668	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	23108668	23108668	A	-	DEL	LOC283683	ENST00000561063	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.058	-	-	-	no_errors	RP11-566K19.6	Clone_based_vega_gene	ENSG00000259344	tier1			84	0	0.00	45	23	33.82
LOC285556	0	genome.wustl.edu	37	4	100573085	100573085	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	100573085	100573085	G	A	SNP	LOC285556	ENST00000511828	human	ensembl	74_37	-1	putative	silent	c.2721	p.N907	0.000	NULL	NULL	-	no_errors	RP11-766F14.2	Clone_based_vega_gene	ENSG00000248713	tier1	-	-	27	0	0.00	10	12	54.55
LOC388906	0	genome.wustl.edu	37	22	42670108	42670108	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	42670108	42670108	C	T	SNP	LOC388906	ENST00000332965	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	Z83851.3	Clone_based_vega_gene	ENSG00000182057	tier1	-	-	56	0	0.00	38	23	37.70
LOC400553	0	genome.wustl.edu	37	16	88123704	88123704	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	88123704	88123704	C	-	DEL	LOC400553	ENST00000378417	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.233	-	-	-	no_errors	RP11-863P13.4	Clone_based_vega_gene	ENSG00000205037	tier1			50	0	0.00	24	7	22.58
LOC401127	0	genome.wustl.edu	37	4	39482010	39482010	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	39482010	39482010	C	T	SNP	LOC401127	ENST00000513652	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-472B18.1	Clone_based_vega_gene	ENSG00000224097	tier1	-	-	24	0	0.00	16	5	23.81
LOC652276	0	genome.wustl.edu	37	16	2653650	2653650	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	2653650	2653650	G	A	SNP	LOC652276	ENST00000399702	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AC141586.5	Clone_based_vega_gene	ENSG00000215154	tier1	-	-	98	0	0.00	44	26	37.14
LOC653712	0	genome.wustl.edu	37	3	128584401	128584401	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	128584401	128584401	A	G	SNP	LOC653712	ENST00000480931	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.168	-	-	-	no_errors	RP11-723O4.2	Clone_based_vega_gene	ENSG00000231305	tier1	-	-	31	0	0.00	24	14	36.84
LOC728715	0	genome.wustl.edu	37	12	9727638	9727638	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	9727638	9727638	G	A	SNP	LOC728715	ENST00000520314	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	RP11-726G1.1	Clone_based_vega_gene	ENSG00000214776				40	0	0.00	65	8	10.96
LOC729224	0	genome.wustl.edu	37	2	202979799	202979800	+	RNA	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	202979799	202979800	-	T	INS	LOC729224	ENST00000409819	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC079354.3	Clone_based_vega_gene	ENSG00000222035	tier1			27	0	0.00	18	10	35.71
LOXHD1	0	genome.wustl.edu	37	18	44140248	44140248	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	44140248	44140248	C	A	SNP	LOXHD1	ENST00000536736	human	ensembl	74_37	-1	known	missense	c.2859	p.E953D	0.007	NULL	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom	-	no_errors	LOXHD1	HGNC	ENSG00000167210	tier1	-	-	30	0	0.00	21	19	47.50
LOXL2	0	genome.wustl.edu	37	8	23225572	23225572	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	23225572	23225572	C	T	SNP	LOXL2	ENST00000389131	human	ensembl	74_37	-1	known	missense	c.293	p.R98Q	1.000	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_Lysyl_oxidase,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_Lysyl_oxidase,prints_SRCR	-	no_errors	LOXL2	HGNC	ENSG00000134013	tier1	rs138761125	-	41	0	0.00	30	12	28.57
LPAL2	0	genome.wustl.edu	37	6	160887595	160887595	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	160887595	160887595	T	-	DEL	LPAL2	ENST00000606083	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.621	-	-	-	no_errors	LPAL2	HGNC	ENSG00000213071	tier1			13	0	0.00	5	6	54.55
LPAR1	0	genome.wustl.edu	37	9	113704388	113704388	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	113704388	113704388	G	T	SNP	LPAR1	ENST00000538760	human	ensembl	74_37	-1	known	silent	c.109	p.R37	1.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_LPA_rcpt_EDG2,prints_LPA_rcpt,prints_GPCR_Rhodpsn	-	no_errors	LPAR1	HGNC	ENSG00000198121	tier1	-	-	48	0	0.00	17	13	43.33
LPHN3	0	genome.wustl.edu	37	4	62812670	62812670	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	62812670	62812670	G	T	SNP	LPHN3	ENST00000507625	human	ensembl	74_37	+1	known	missense	c.2458	p.G820C	1.000	pfam_DUF3497	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN3	HGNC	ENSG00000150471	tier1	-	-	129	0	0.00	110	9	7.56
LPIN3	0	genome.wustl.edu	37	20	39977440	39977440	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	39977440	39977440	T	C	SNP	LPIN3	ENST00000373257	human	ensembl	74_37	+1	known	missense	c.470	p.V157A	0.004	NULL	pfam_LNS2,pfam_Lipin_N,superfamily_HAD-like_dom,smart_LNS2	-	no_errors	LPIN3	HGNC	ENSG00000132793	tier1	-	-	28	0	0.00	15	10	40.00
LRAT	0	genome.wustl.edu	37	4	155665742	155665742	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	155665742	155665742	G	A	SNP	LRAT	ENST00000336356	human	ensembl	74_37	+1	known	silent	c.264	p.T88	0.090	NULL	pfam_LRAT-like_dom	-	no_errors	LRAT	HGNC	ENSG00000121207	tier1	-	-	25	0	0.00	7	11	57.89
LRBA	0	genome.wustl.edu	37	4	151765309	151765309	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	151765309	151765309	G	T	SNP	LRBA	ENST00000357115	human	ensembl	74_37	-1	known	missense	c.4512	p.D1504E	1.000	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom	-	no_errors	LRBA	HGNC	ENSG00000198589	tier1	-	-	60	0	0.00	65	4	5.80
LRG1	0	genome.wustl.edu	37	19	4538425	4538425	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	4538425	4538425	G	A	SNP	LRG1	ENST00000306390	human	ensembl	74_37	-1	known	missense	c.571	p.R191C	0.885	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRG1	HGNC	ENSG00000171236	tier1	-	-	59	0	0.00	27	27	50.00
LRIG2	0	genome.wustl.edu	37	1	113661870	113661870	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	113661870	113661870	G	A	SNP	LRIG2	ENST00000361127	human	ensembl	74_37	+1	known	missense	c.2696	p.R899Q	1.000	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG2	HGNC	ENSG00000198799	tier1	-	-	56	0	0.00	38	23	37.70
LRIT2	0	genome.wustl.edu	37	10	85984820	85984820	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	85984820	85984820	G	T	SNP	LRIT2	ENST00000538192	human	ensembl	74_37	-1	known	missense	c.161	p.S54Y	0.723	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIT2	HGNC	ENSG00000204033	tier1	-	-	27	0	0.00	32	4	11.11
LRP1	0	genome.wustl.edu	37	12	57605984	57605984	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	57605984	57605984	C	T	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	silent	c.13434	p.G4478	0.845	NULL	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	tier1	-	-	15	0	0.00	10	8	44.44
LRP10	0	genome.wustl.edu	37	14	23346171	23346171	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	23346171	23346171	G	A	SNP	LRP10	ENST00000359591	human	ensembl	74_37	+1	known	missense	c.1577	p.R526H	1.000	NULL	pfam_LDrepeatLR_classA_rpt,pfam_CUB_dom,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP10	HGNC	ENSG00000197324	tier1	-	-	63	0	0.00	29	18	38.30
LRP12	0	genome.wustl.edu	37	8	105501486	105501487	+	RNA	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	105501486	105501487	-	A	INS	LRP12	ENST00000518375	human	ensembl	74_37	-1	putative	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1			22	0	0.00	36	7	16.28
LRP12	0	genome.wustl.edu	37	8	105502452	105502452	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	105502452	105502452	T	-	DEL	LRP12	ENST00000518375	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1			39	0	0.00	23	55	70.51
LRP12	0	genome.wustl.edu	37	8	105509429	105509429	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	105509429	105509429	A	-	DEL	LRP12	ENST00000424843	human	ensembl	74_37	-1	known	frame_shift_del	c.1294	p.C432fs	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1			90	0	0.00	56	53	48.62
LRP1B	0	genome.wustl.edu	37	2	141201960	141201960	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	141201960	141201960	T	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	silent	c.10233	p.P3411	0.010	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	64	0	0.00	51	26	33.77
LRP1B	0	genome.wustl.edu	37	2	141259309	141259309	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	141259309	141259309	T	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.8797	p.K2933E	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	57	0	0.00	29	19	39.58
LRP1B	0	genome.wustl.edu	37	2	141946015	141946015	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	141946015	141946015	C	T	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.988	p.A330T	1.000	pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	21	0	0.00	12	14	53.85
LRRC16B	0	genome.wustl.edu	37	14	24529193	24529193	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	24529193	24529193	G	T	SNP	LRRC16B	ENST00000342740	human	ensembl	74_37	+1	known	missense	c.1883	p.R628L	1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648	tier1	-	-	73	0	0.00	22	13	37.14
LRRC24	0	genome.wustl.edu	37	8	145748682	145748682	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	145748682	145748682	G	-	DEL	LRRC24	ENST00000529415	human	ensembl	74_37	-1	known	frame_shift_del	c.719	p.P240fs	0.998	smart_Cys-rich_flank_reg_C	pfam_Ig_I-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRC24	HGNC	ENSG00000254402	tier1			56	0	0.00	68	25	26.88
LRRC37A2	0	genome.wustl.edu	37	17	44632696	44632696	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	44632696	44632696	T	C	SNP	LRRC37A2	ENST00000333412	human	ensembl	74_37	+1	known	missense	c.4960	p.Y1654H	0.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC37A2	HGNC	ENSG00000238083	tier1	-	-	61	0	0.00	11	53	81.54
LRRC37A3	0	genome.wustl.edu	37	17	62855814	62855814	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	62855814	62855814	C	T	SNP	LRRC37A3	ENST00000319651	human	ensembl	74_37	-1	known	missense	c.4450	p.V1484I	0.100	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC37A3	HGNC	ENSG00000176809	tier1	-	-	157	0	0.00	118	59	33.33
LRRC37A7P	0	genome.wustl.edu	37	18	29304406	29304406	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	29304406	29304406	G	A	SNP	LRRC37A7P	ENST00000583900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	LRRC37A7P	HGNC	ENSG00000265158	tier1	-	-	23	0	0.00	10	10	50.00
LRRC37B	0	genome.wustl.edu	37	17	30348815	30348815	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	30348815	30348815	G	A	SNP	LRRC37B	ENST00000341671	human	ensembl	74_37	+1	known	missense	c.650	p.R217H	0.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC37B	HGNC	ENSG00000185158	tier1	rs145638325	-	34	0	0.00	19	25	56.82
LRRC48	0	genome.wustl.edu	37	17	17891352	17891352	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	17891352	17891352	C	T	SNP	LRRC48	ENST00000313838	human	ensembl	74_37	+1	known	silent	c.384	p.D128	0.014	NULL	NULL	-	no_errors	LRRC48	HGNC	ENSG00000171962	tier1	-	-	34	0	0.00	12	17	58.62
LRRC6	0	genome.wustl.edu	37	8	133637520	133637520	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	133637520	133637520	T	A	SNP	LRRC6	ENST00000250173	human	ensembl	74_37	-1	known	missense	c.834	p.L278F	0.995	NULL	superfamily_HSP20-like_chaperone,smart_U2A'_phosphoprotein32A_C,pfscan_CS_dom	-	no_errors	LRRC6	HGNC	ENSG00000129295	tier1	-	-	112	0	0.00	97	44	31.21
LRRC6	0	genome.wustl.edu	37	8	133637521	133637521	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	133637521	133637521	A	G	SNP	LRRC6	ENST00000250173	human	ensembl	74_37	-1	known	missense	c.833	p.L278S	0.988	NULL	superfamily_HSP20-like_chaperone,smart_U2A'_phosphoprotein32A_C,pfscan_CS_dom	-	no_errors	LRRC6	HGNC	ENSG00000129295	tier1	-	-	112	0	0.00	97	44	31.21
LRRC6	0	genome.wustl.edu	37	8	133687535	133687535	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	133687535	133687535	C	T	SNP	LRRC6	ENST00000521430	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LRRC6	HGNC	ENSG00000129295	tier1	-	-	16	0	0.00	14	4	22.22
LRRC66	0	genome.wustl.edu	37	4	52860637	52860637	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	52860637	52860637	C	T	SNP	LRRC66	ENST00000343457	human	ensembl	74_37	-1	known	missense	c.2551	p.V851I	0.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC66	HGNC	ENSG00000188993	tier1	-	-	85	0	0.00	57	23	28.75
LRRC8D	0	genome.wustl.edu	37	1	90399253	90399253	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	90399253	90399253	C	T	SNP	LRRC8D	ENST00000337338	human	ensembl	74_37	+1	known	missense	c.626	p.T209M	1.000	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8D	HGNC	ENSG00000171492	tier1	-	-	37	0	0.00	22	8	26.67
LRRIQ3	0	genome.wustl.edu	37	1	74549888	74549889	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	74549888	74549889	-	T	INS	LRRIQ3	ENST00000415760	human	ensembl	74_37	-1	known	frame_shift_ins	c.880_879	p.L293fs	0.998:0.995	NULL	pfam_Leu-rich_rpt,pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ3	HGNC	ENSG00000162620	tier1			22	0	0.00	30	11	26.83
LRRK1	0	genome.wustl.edu	37	15	101566237	101566237	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	101566237	101566237	G	A	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	missense	c.2300	p.R767H	1.000	pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237	tier1	-	-	111	0	0.00	68	28	29.17
LRRK1	0	genome.wustl.edu	37	15	101593468	101593468	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	101593468	101593468	G	T	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	missense	c.3897	p.K1299N	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237	tier1	-	-	70	0	0.00	42	4	8.70
LRRK2	0	genome.wustl.edu	37	12	40702287	40702287	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	40702287	40702287	A	-	DEL	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	frame_shift_del	c.3978	p.K1328fs	0.982	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1			35	0	0.00	27	17	38.64
LRTM1	0	genome.wustl.edu	37	3	54958868	54958868	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	54958868	54958868	C	A	SNP	LRTM1	ENST00000273286	human	ensembl	74_37	-1	known	missense	c.382	p.D128Y	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRTM1	HGNC	ENSG00000144771	tier1	-	-	54	0	0.00	18	16	47.06
LTBP2	0	genome.wustl.edu	37	14	74995695	74995695	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	74995695	74995695	G	A	SNP	LTBP2	ENST00000261978	human	ensembl	74_37	-1	known	silent	c.2118	p.G706	0.176	pfam_TB_dom,superfamily_TB_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP2	HGNC	ENSG00000119681	tier1	-	-	68	0	0.00	31	19	38.00
LTBP3	0	genome.wustl.edu	37	11	65315233	65315233	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	65315233	65315233	C	T	SNP	LTBP3	ENST00000301873	human	ensembl	74_37	-1	known	missense	c.1906	p.G636S	0.319	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP3	HGNC	ENSG00000168056	tier1	-	-	62	0	0.00	30	15	33.33
LTN1	0	genome.wustl.edu	37	21	30339206	30339207	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	30339206	30339207	TT	-	DEL	LTN1	ENST00000389194	human	ensembl	74_37	-1	known	frame_shift_del	c.1745_1744	p.N582fs	0.000:0.034	superfamily_ARM-type_fold	pfam_Znf_C3HC4_RING-type,superfamily_ARM-type_fold,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	LTN1	HGNC	ENSG00000198862	tier1			61	0	0.00	38	26	40.62
LY6G6E	0	genome.wustl.edu	37	6	31680129	31680129	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	31680129	31680129	G	T	SNP	LY6G6E	ENST00000383418	human	ensembl	74_37	-1	known	missense	c.367	p.L123I	0.000	NULL	NULL	-	no_errors	LY6G6E	HGNC	ENSG00000255552	tier1	-	-	29	0	0.00	18	3	14.29
LYAR	0	genome.wustl.edu	37	4	4285408	4285408	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	4285408	4285408	T	C	SNP	LYAR	ENST00000343470	human	ensembl	74_37	-1	known	missense	c.62	p.H21R	0.997	NULL	pfam_Znf_C2H2_LYAR	-	no_errors	LYAR	HGNC	ENSG00000145220	tier1	-	-	65	0	0.00	48	22	31.43
LYN	0	genome.wustl.edu	37	8	56864612	56864612	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	56864612	56864612	G	A	SNP	LYN	ENST00000519728	human	ensembl	74_37	+1	known	missense	c.575	p.G192D	1.000	pfam_SH2,smart_SH2,pfscan_SH2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	LYN	HGNC	ENSG00000254087	tier1	-	-	64	0	0.00	70	17	19.54
LYPLAL1	0	genome.wustl.edu	37	1	219366651	219366651	+	RNA	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	219366651	219366651	T	C	SNP	LYPLAL1	ENST00000496776	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LYPLAL1	HGNC	ENSG00000143353	tier1	-	-	20	0	0.00	24	10	29.41
LYST	0	genome.wustl.edu	37	1	235897834	235897834	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	235897834	235897834	G	T	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	nonsense	c.8484	p.C2828*	1.000	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669	tier1	-	-	66	0	0.00	65	4	5.80
LYST	0	genome.wustl.edu	37	1	235914600	235914600	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	235914600	235914600	C	T	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	missense	c.7690	p.A2564T	0.993	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669	tier1	-	-	64	0	0.00	30	26	46.43
LZTR1	0	genome.wustl.edu	37	22	21345976	21345976	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	21345976	21345976	G	A	SNP	LZTR1	ENST00000215739	human	ensembl	74_37	+1	known	missense	c.851	p.R284H	1.000	pfam_Kelch_1,pfam_Kelch_2,smart_Kelch_1	pfam_Kelch_1,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_Kelch_1,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	LZTR1	HGNC	ENSG00000099949	tier1	-	-	42	0	0.00	18	17	48.57
LZTS1	0	genome.wustl.edu	37	8	20110344	20110344	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	20110344	20110344	G	A	SNP	LZTS1	ENST00000265801	human	ensembl	74_37	-1	known	silent	c.1098	p.Y366	0.838	NULL	NULL	-	no_errors	LZTS1	HGNC	ENSG00000061337	tier1	-	-	23	0	0.00	24	7	22.58
MACC1	0	genome.wustl.edu	37	7	20199466	20199466	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	20199466	20199466	T	-	DEL	MACC1	ENST00000332878	human	ensembl	74_37	-1	known	frame_shift_del	c.518	p.N173fs	1.000	NULL	pfam_SH3_2,superfamily_DEATH-like_dom	-	no_errors	MACC1	HGNC	ENSG00000183742	tier1			17	0	0.00	15	8	34.78
MACF1	0	genome.wustl.edu	37	1	39951743	39951746	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	39951743	39951746	AAAA	-	DEL	MACF1	ENST00000496360	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.084:0.001:0.001:0.000	-	-	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1			37	0	0.00	35	19	35.19
MAD2L1	0	genome.wustl.edu	37	4	120982060	120982060	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	120982060	120982060	C	T	SNP	MAD2L1	ENST00000296509	human	ensembl	74_37	-1	known	silent	c.414	p.T138	0.012	pfam_HORMA_DNA-bd,superfamily_HORMA_DNA-bd,pfscan_HORMA_DNA-bd	pfam_HORMA_DNA-bd,superfamily_HORMA_DNA-bd,pfscan_HORMA_DNA-bd	-	no_errors	MAD2L1	HGNC	ENSG00000164109	tier1	-	-	51	0	0.00	38	22	36.67
MADCAM1	0	genome.wustl.edu	37	19	498664	498666	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	498664	498666	AGG	-	DEL	MADCAM1	ENST00000215637	human	ensembl	74_37	+1	known	in_frame_del	c.506_508	p.E173in_frame_del	0.029:0.036:0.046	pfam_Adhes-Ig-like	pfam_Adhes-Ig-like,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	MADCAM1	HGNC	ENSG00000099866	tier1			29	0	0.00	24	3	11.11
MADD	0	genome.wustl.edu	37	11	47310955	47310955	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	47310955	47310955	G	A	SNP	MADD	ENST00000311027	human	ensembl	74_37	+1	known	silent	c.2727	p.A909	0.955	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	MADD	HGNC	ENSG00000110514	tier1	-	-	66	0	0.00	36	21	36.84
MAFK	0	genome.wustl.edu	37	7	1579726	1579726	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	1579726	1579726	C	T	SNP	MAFK	ENST00000343242	human	ensembl	74_37	+1	known	silent	c.186	p.R62	0.006	pfam_bZIP_Maf,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	pfam_bZIP_Maf,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	MAFK	HGNC	ENSG00000198517	tier1	-	-	85	0	0.00	38	12	24.00
MAGEA10	0	genome.wustl.edu	37	X	151303084	151303084	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	151303084	151303084	C	A	SNP	MAGEA10	ENST00000244096	human	ensembl	74_37	-1	known	nonsense	c.1009	p.E337*	0.002	NULL	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA10	HGNC	ENSG00000124260				26	0	0.00	27	3	10.00
MAGEC1	0	genome.wustl.edu	37	X	140994824	140994824	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	140994824	140994824	C	A	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	missense	c.1634	p.P545H	0.001	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	tier1	-	-	43	0	0.00	9	23	71.88
MAGI2	0	genome.wustl.edu	37	7	77797325	77797325	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	77797325	77797325	C	T	SNP	MAGI2	ENST00000354212	human	ensembl	74_37	-1	known	missense	c.2504	p.G835D	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI2	HGNC	ENSG00000187391				123	0	0.00	79	5	5.95
MAMDC4	0	genome.wustl.edu	37	9	139753253	139753253	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	139753253	139753253	C	A	SNP	MAMDC4	ENST00000445819	human	ensembl	74_37	+1	known	silent	c.3141	p.T1047	0.001	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_MAM_dom,pfam_LDrepeatLR_classA_rpt,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_MAM_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	MAMDC4	HGNC	ENSG00000177943	tier1	-	-	10	0	0.00	6	6	50.00
MAML3	0	genome.wustl.edu	37	4	140810429	140810429	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	140810429	140810429	G	T	SNP	MAML3	ENST00000398940	human	ensembl	74_37	-1	known	silent	c.741	p.S247	0.000	NULL	NULL	-	no_errors	MAML3	HGNC	ENSG00000196782	tier1	-	-	52	0	0.00	62	4	5.97
MAMLD1	0	genome.wustl.edu	37	X	149638719	149638719	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	149638719	149638719	G	A	SNP	MAMLD1	ENST00000432680	human	ensembl	74_37	+1	known	missense	c.799	p.A267T	0.000	NULL	NULL	-	no_errors	MAMLD1	HGNC	ENSG00000013619	tier1	-	-	8	0	0.00	2	9	81.82
MAN1A2	0	genome.wustl.edu	37	1	118065513	118065513	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	118065513	118065513	G	T	SNP	MAN1A2	ENST00000356554	human	ensembl	74_37	+1	known	missense	c.1860	p.E620D	1.000	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	MAN1A2	HGNC	ENSG00000198162	tier1	-	-	76	0	0.00	69	6	8.00
MAP1B	0	genome.wustl.edu	37	5	71494172	71494172	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	71494172	71494172	C	T	SNP	MAP1B	ENST00000296755	human	ensembl	74_37	+1	known	nonsense	c.4990	p.R1664*	1.000	NULL	pfam_MAP1B_neuraxin	-	no_errors	MAP1B	HGNC	ENSG00000131711				29	0	0.00	14	3	17.65
MAP2K7	0	genome.wustl.edu	37	19	7975078	7975078	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	7975078	7975078	C	T	SNP	MAP2K7	ENST00000545011	human	ensembl	74_37	+1	known	missense	c.397	p.R133C	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP2K7	HGNC	ENSG00000076984	tier1	-	-	24	0	0.00	15	5	25.00
MAP3K1	0	genome.wustl.edu	37	5	56177848	56177849	+	In_Frame_Ins	INS	-	-	CAA			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	56177848	56177849	-	CAA	INS	MAP3K1	ENST00000399503	human	ensembl	74_37	+1	novel	in_frame_ins	c.2821_2822	p.945in_frame_insT	0.964:0.958	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	tier1			25	0	0.00	25	6	19.35
MAP3K5	0	genome.wustl.edu	37	6	136972139	136972139	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	136972139	136972139	C	T	SNP	MAP3K5	ENST00000359015	human	ensembl	74_37	-1	known	missense	c.1771	p.V591M	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP3K5	HGNC	ENSG00000197442	tier1	-	-	69	0	0.00	26	16	38.10
MAP3K5	0	genome.wustl.edu	37	6	137019800	137019800	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	137019800	137019800	G	T	SNP	MAP3K5	ENST00000359015	human	ensembl	74_37	-1	known	silent	c.633	p.T211	0.750	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP3K5	HGNC	ENSG00000197442	tier1	-	-	37	0	0.00	21	13	38.24
MAP3K5	0	genome.wustl.edu	37	6	137113057	137113057	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	137113057	137113057	C	T	SNP	MAP3K5	ENST00000359015	human	ensembl	74_37	-1	known	missense	c.239	p.R80Q	0.986	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP3K5	HGNC	ENSG00000197442	tier1	-	-	63	0	0.00	33	26	43.33
MAP3K5	0	genome.wustl.edu	37	6	137018373	137018373	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	137018373	137018373	G	T	SNP	MAP3K5	ENST00000359015	human	ensembl	74_37	-1	known	missense	c.959	p.S320Y	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP3K5	HGNC	ENSG00000197442				25	0	0.00	12	2	14.29
MAP3K6	0	genome.wustl.edu	37	1	27684951	27684951	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	27684951	27684951	C	T	SNP	MAP3K6	ENST00000357582	human	ensembl	74_37	-1	known	missense	c.2735	p.S912N	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K6	HGNC	ENSG00000142733	tier1	-	-	40	0	0.00	20	14	41.18
MAP3K7	0	genome.wustl.edu	37	6	91246115	91246115	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	91246115	91246115	C	T	SNP	MAP3K7	ENST00000369329	human	ensembl	74_37	-1	known	missense	c.1297	p.G433R	1.000	pirsf_MAPKKK7	pirsf_MAPKKK7,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K7	HGNC	ENSG00000135341	tier1	-	-	22	0	0.00	10	14	58.33
MAP4K5	0	genome.wustl.edu	37	14	50886759	50886759	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	50886759	50886759	G	T	SNP	MAP4K5	ENST00000013125	human	ensembl	74_37	-1	known	missense	c.2519	p.A840D	1.000	NULL	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	MAP4K5	HGNC	ENSG00000012983	tier1	-	-	46	0	0.00	73	4	5.19
MAPK8IP3	0	genome.wustl.edu	37	16	1798334	1798334	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	1798334	1798334	C	T	SNP	MAPK8IP3	ENST00000250894	human	ensembl	74_37	+1	known	missense	c.1081	p.R361C	1.000	NULL	pfam_JNK/Rab-associated_protein-1_N,superfamily_WD40_repeat_dom	-	no_errors	MAPK8IP3	HGNC	ENSG00000138834	tier1	-	-	43	0	0.00	19	14	42.42
MAPK8IP3	0	genome.wustl.edu	37	16	1818241	1818241	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	1818241	1818241	G	-	DEL	MAPK8IP3	ENST00000250894	human	ensembl	74_37	+1	known	frame_shift_del	c.3601	p.G1202fs	0.844	NULL	pfam_JNK/Rab-associated_protein-1_N,superfamily_WD40_repeat_dom	-	no_errors	MAPK8IP3	HGNC	ENSG00000138834	tier1			65	0	0.00	33	12	26.67
MAPKAP1	0	genome.wustl.edu	37	9	128327728	128327728	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	128327728	128327728	T	-	DEL	MAPKAP1	ENST00000448439	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	MAPKAP1	HGNC	ENSG00000119487	tier1			9	0	0.00	4	7	63.64
MAPKAP1	0	genome.wustl.edu	37	9	128347905	128347905	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	128347905	128347905	G	A	SNP	MAPKAP1	ENST00000265960	human	ensembl	74_37	-1	known	silent	c.600	p.S200	0.918	pfam_SIN1	pfam_SIN1	-	no_errors	MAPKAP1	HGNC	ENSG00000119487	tier1	-	-	108	0	0.00	53	42	43.75
MAPKAPK2	0	genome.wustl.edu	37	1	206904645	206904646	+	RNA	DEL	GT	GT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	206904645	206904646	GT	-	DEL	MAPKAPK2	ENST00000479009	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MAPKAPK2	HGNC	ENSG00000162889	tier1			18	0	0.00	20	6	23.08
MAPKBP1	0	genome.wustl.edu	37	15	42105843	42105843	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	42105843	42105843	G	A	SNP	MAPKBP1	ENST00000456763	human	ensembl	74_37	+1	known	missense	c.862	p.V288M	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MAPKBP1	HGNC	ENSG00000137802	tier1	-	-	72	0	0.00	36	20	35.71
MAPKBP1	0	genome.wustl.edu	37	15	42115240	42115240	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	42115240	42115240	G	T	SNP	MAPKBP1	ENST00000456763	human	ensembl	74_37	+1	known	nonsense	c.3436	p.G1146*	0.985	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MAPKBP1	HGNC	ENSG00000137802	tier1	-	-	53	0	0.00	36	4	10.00
MAPRE3	0	genome.wustl.edu	37	2	27248516	27248517	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	27248516	27248517	-	C	INS	MAPRE3	ENST00000233121	human	ensembl	74_37	+1	known	frame_shift_ins	c.535_536	p.C182fs	0.999:1.000	NULL	pfam_EB1_C,pfam_CH-domain,superfamily_CH-domain,superfamily_EB1_C,pfscan_CH-domain	-	no_errors	MAPRE3	HGNC	ENSG00000084764	tier1			40	0	0.00	30	14	31.82
MARK1	0	genome.wustl.edu	37	1	220825486	220825486	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	220825486	220825486	G	T	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	missense	c.1730	p.R577L	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141	tier1	-	-	64	0	0.00	86	6	6.52
MARK2	0	genome.wustl.edu	37	11	63665754	63665754	+	Splice_Site	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	63665754	63665754	T	C	SNP	MARK2	ENST00000402010	human	ensembl	74_37	+1	known	splice_site	c.337+2	e4+2	1.000	-	-	-	no_errors	MARK2	HGNC	ENSG00000072518	tier1	-	-	54	0	0.00	20	16	44.44
MARK4	0	genome.wustl.edu	37	19	45790780	45790780	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	45790780	45790780	G	A	SNP	MARK4	ENST00000262891	human	ensembl	74_37	+1	known	missense	c.1352	p.R451Q	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,pfam_UBA/Ts_N,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK4	HGNC	ENSG00000007047	tier1	-	-	47	0	0.00	21	15	41.67
MARS	0	genome.wustl.edu	37	12	57894297	57894297	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	57894297	57894297	G	A	SNP	MARS	ENST00000262027	human	ensembl	74_37	+1	known	missense	c.1285	p.E429K	1.000	pfam_Methionyl/Leucyl_tRNA_Synth,tigrfam_Met-tRNA_synth	pfam_Methionyl/Leucyl_tRNA_Synth,pfam_WHEP-TRS,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Glutathione-S-Trfase_C-like,superfamily_S15_NS1_RNA-bd,superfamily_Thioredoxin-like_fold,pfscan_WHEP-TRS,prints_Met-tRNA_synth,tigrfam_Met-tRNA_synth	-	no_errors	MARS	HGNC	ENSG00000166986	tier1	-	-	41	0	0.00	26	14	35.00
MARS2	0	genome.wustl.edu	37	2	198571219	198571219	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	198571219	198571219	C	T	SNP	MARS2	ENST00000282276	human	ensembl	74_37	+1	known	missense	c.1090	p.R364C	0.345	pfam_Methionyl/Leucyl_tRNA_Synth,pfam_aa-tRNA-synth_Ia,pfam_Cys-tRNA/MSH_ligase,tigrfam_Met-tRNA_synth	pfam_Methionyl/Leucyl_tRNA_Synth,pfam_aa-tRNA-synth_Ia,pfam_Cys-tRNA/MSH_ligase,superfamily_tRNAsynth_1a_anticodon-bd,prints_Met-tRNA_synth,tigrfam_Met-tRNA_synth	-	no_errors	MARS2	HGNC	ENSG00000247626	tier1	-	-	130	0	0.00	61	30	32.97
MAST2	0	genome.wustl.edu	37	1	46496366	46496366	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	46496366	46496366	G	T	SNP	MAST2	ENST00000361297	human	ensembl	74_37	+1	known	missense	c.2641	p.D881Y	1.000	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST2	HGNC	ENSG00000086015				66	0	0.00	62	4	6.06
MASTL	0	genome.wustl.edu	37	10	27459056	27459056	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	27459056	27459056	A	-	DEL	MASTL	ENST00000375940	human	ensembl	74_37	+1	known	frame_shift_del	c.1168	p.K391fs	0.077	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MASTL	HGNC	ENSG00000120539	tier1			36	0	0.00	14	5	26.32
MBD5	0	genome.wustl.edu	37	2	149221353	149221353	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	149221353	149221353	G	T	SNP	MBD5	ENST00000407073	human	ensembl	74_37	+1	known	nonsense	c.262	p.E88*	1.000	smart_Methyl_CpG_DNA-bd	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd,pfscan_PWWP_dom	-	no_errors	MBD5	HGNC	ENSG00000204406				18	0	0.00	30	4	11.76
MBL1P	0	genome.wustl.edu	37	10	81680652	81680652	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	81680652	81680652	G	T	SNP	MBL1P	ENST00000480805	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MBL1P	HGNC	ENSG00000242600				61	0	0.00	52	9	14.75
MBL1P	0	genome.wustl.edu	37	10	81680656	81680656	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	81680656	81680656	A	G	SNP	MBL1P	ENST00000480805	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MBL1P	HGNC	ENSG00000242600				61	0	0.00	16	10	15.38
MBOAT1	0	genome.wustl.edu	37	6	20152936	20152936	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	20152936	20152936	C	T	SNP	MBOAT1	ENST00000324607	human	ensembl	74_37	-1	known	missense	c.164	p.R55H	0.742	NULL	pfam_MBOAT_fam	-	no_errors	MBOAT1	HGNC	ENSG00000172197	tier1	-	-	48	0	0.00	22	14	38.89
MBTPS1	0	genome.wustl.edu	37	16	84108235	84108235	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	84108235	84108235	G	A	SNP	MBTPS1	ENST00000343411	human	ensembl	74_37	-1	known	silent	c.1560	p.N520	0.979	NULL	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom,prints_Peptidase_S8_subtilisin-rel	-	no_errors	MBTPS1	HGNC	ENSG00000140943	tier1	-	-	61	0	0.00	26	30	53.57
MBTPS1	0	genome.wustl.edu	37	16	84127327	84127327	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	84127327	84127327	G	A	SNP	MBTPS1	ENST00000343411	human	ensembl	74_37	-1	known	missense	c.725	p.T242M	1.000	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom,prints_Peptidase_S8_subtilisin-rel	-	no_errors	MBTPS1	HGNC	ENSG00000140943	tier1	-	-	46	0	0.00	34	14	28.57
MBTPS1	0	genome.wustl.edu	37	16	84132850	84132850	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	84132850	84132850	G	T	SNP	MBTPS1	ENST00000343411	human	ensembl	74_37	-1	known	missense	c.229	p.L77M	1.000	NULL	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom,prints_Peptidase_S8_subtilisin-rel	-	no_errors	MBTPS1	HGNC	ENSG00000140943				72	0	0.00	90	7	7.22
MCAM	0	genome.wustl.edu	37	11	119182249	119182249	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	119182249	119182249	G	T	SNP	MCAM	ENST00000264036	human	ensembl	74_37	-1	known	silent	c.1398	p.V466	0.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Immunoglobulin,pfam_CD80_C2-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MCAM	HGNC	ENSG00000076706				55	0	0.00	33	3	8.33
MCHR2	0	genome.wustl.edu	37	6	100382357	100382358	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	100382357	100382358	-	A	INS	MCHR2	ENST00000281806	human	ensembl	74_37	-1	known	frame_shift_ins	c.624_623	p.L210fs	1.000:1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_MCH2_receptor,prints_GPCR_Rhodpsn,prints_MCH_rcpt	-	no_errors	MCHR2	HGNC	ENSG00000152034	tier1			38	0	0.00	33	12	26.67
MCM2	0	genome.wustl.edu	37	3	127339610	127339610	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	127339610	127339610	C	T	SNP	MCM2	ENST00000265056	human	ensembl	74_37	+1	known	missense	c.2335	p.R779C	0.996	pfam_MCM_DNA-dep_ATPase,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_MCM2,pfam_Mg_chelatse_chII,pfam_ATPase_AAA-3,pfam_ATPase_dyneun-rel_AAA,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM2,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM2	HGNC	ENSG00000073111	tier1	-	-	43	0	0.00	19	15	44.12
MCM3AP-AS1	0	genome.wustl.edu	37	21	47662235	47662237	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	47662235	47662237	TTT	-	DEL	MCM3AP-AS1	ENST00000421927	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.165:0.204:0.305	-	-	-	no_errors	MCM3AP-AS1	HGNC	ENSG00000215424	tier1			27	0	0.00	23	10	30.30
MCOLN1	0	genome.wustl.edu	37	19	7595268	7595268	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	7595268	7595268	C	T	SNP	MCOLN1	ENST00000264079	human	ensembl	74_37	+1	known	missense	c.1456	p.R486C	1.000	pfam_PKD1_2_channel	pfam_PKD1_2_channel,superfamily_Glycoside_hydrolase_SF	-	no_errors	MCOLN1	HGNC	ENSG00000090674	tier1	-	-	54	0	0.00	25	18	41.86
MCPH1	0	genome.wustl.edu	37	8	6289099	6289099	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	6289099	6289099	A	-	DEL	MCPH1	ENST00000344683	human	ensembl	74_37	+1	known	frame_shift_del	c.313	p.K107fs	0.022	NULL	pfam_Microcephalin,pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom,prints_BRCA1	-	no_errors	MCPH1	HGNC	ENSG00000147316	tier1			13	0	0.00	18	11	37.93
MCPH1	0	genome.wustl.edu	37	8	6479132	6479132	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	6479132	6479132	G	A	SNP	MCPH1	ENST00000344683	human	ensembl	74_37	+1	known	missense	c.2372	p.R791H	0.000	superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	pfam_Microcephalin,pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom,prints_BRCA1	-	no_errors	MCPH1	HGNC	ENSG00000147316	tier1	-	-	107	0	0.00	82	33	28.45
MCTP1	0	genome.wustl.edu	37	5	94050578	94050578	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	94050578	94050578	T	-	DEL	MCTP1	ENST00000515393	human	ensembl	74_37	-1	known	frame_shift_del	c.2624	p.K875fs	1.000	pfam_PRibTrfase_C	pfam_C2_dom,pfam_PRibTrfase_C,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_C2_dom	-	no_errors	MCTP1	HGNC	ENSG00000175471	tier1			47	0	0.00	55	22	28.57
MDGA2	0	genome.wustl.edu	37	14	47530713	47530713	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	47530713	47530713	G	T	SNP	MDGA2	ENST00000439988	human	ensembl	74_37	-1	known	missense	c.1264	p.R422S	1.000	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA2	Uniprot_gn	ENSG00000272781	tier1	-	-	31	0	0.00	10	9	47.37
MDH1B	0	genome.wustl.edu	37	2	207620188	207620188	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	207620188	207620188	G	A	SNP	MDH1B	ENST00000374412	human	ensembl	74_37	-1	known	missense	c.455	p.T152M	0.001	NULL	pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C	-	no_errors	MDH1B	HGNC	ENSG00000138400	tier1	-	-	40	0	0.00	18	19	51.35
MDN1	0	genome.wustl.edu	37	6	90458950	90458950	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	90458950	90458950	C	T	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	missense	c.3754	p.D1252N	1.000	superfamily_P-loop_NTPase,pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159	tier1	-	-	47	0	0.00	37	16	30.19
MEAF6	0	genome.wustl.edu	37	1	37967411	37967411	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	37967411	37967411	C	T	SNP	MEAF6	ENST00000373075	human	ensembl	74_37	-1	known	missense	c.527	p.R176Q	1.000	NULL	pfam_Hist_AcTrfase_NuA4_cplx	-	no_errors	MEAF6	HGNC	ENSG00000163875	tier1	-	-	89	0	0.00	70	44	38.26
MECOM	0	genome.wustl.edu	37	3	168833257	168833257	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	168833257	168833257	T	-	DEL	MECOM	ENST00000494292	human	ensembl	74_37	-1	known	frame_shift_del	c.2403	p.G802fs	1.000	NULL	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	MECOM	HGNC	ENSG00000085276	tier1			101	0	0.00	66	25	27.47
MED13L	0	genome.wustl.edu	37	12	116412999	116412999	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	116412999	116412999	C	T	SNP	MED13L	ENST00000281928	human	ensembl	74_37	-1	known	missense	c.5708	p.R1903H	1.000	pfam_Mediator_Med13	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13L	HGNC	ENSG00000123066	tier1	-	-	38	0	0.00	21	25	54.35
MED14	0	genome.wustl.edu	37	X	40588606	40588608	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	40588606	40588608	AAA	-	DEL	MED14	ENST00000463072	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.610	-	-	-	no_errors	MED14	HGNC	ENSG00000180182	tier1			17	0	0.00	12	12	50.00
MED23	0	genome.wustl.edu	37	6	131919846	131919846	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	131919846	131919846	T	-	DEL	MED23	ENST00000368058	human	ensembl	74_37	-1	known	frame_shift_del	c.2294	p.N765fs	1.000	pfam_Mediator_Med23	pfam_Mediator_Med23	-	no_errors	MED23	HGNC	ENSG00000112282	tier1			30	0	0.00	21	14	40.00
MED24	0	genome.wustl.edu	37	17	38182920	38182920	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	38182920	38182920	G	T	SNP	MED24	ENST00000394128	human	ensembl	74_37	-1	known	missense	c.1789	p.L597M	0.905	pfam_Mediator_Med24_N	pfam_Mediator_Med24_N	-	no_errors	MED24	HGNC	ENSG00000008838	tier1	-	-	58	0	0.00	43	33	43.42
MED26	0	genome.wustl.edu	37	19	16687924	16687925	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	16687924	16687925	-	G	INS	MED26	ENST00000263390	human	ensembl	74_37	-1	known	frame_shift_ins	c.717_716	p.G240fs	0.775:0.991	NULL	pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	MED26	HGNC	ENSG00000105085	tier1			21	0	0.00	9	6	40.00
MEG3	0	genome.wustl.edu	37	14	101301181	101301181	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	101301181	101301181	T	-	DEL	MEG3	ENST00000398461	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MEG3	HGNC	ENSG00000214548	tier1			26	0	0.00	12	6	33.33
MEGF6	0	genome.wustl.edu	37	1	3417208	3417208	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	3417208	3417208	C	T	SNP	MEGF6	ENST00000356575	human	ensembl	74_37	-1	known	missense	c.2696	p.R899Q	0.000	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin	pfam_EGF_laminin,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF6	HGNC	ENSG00000162591	tier1	-	-	150	0	0.00	55	30	35.29
MEGF8	0	genome.wustl.edu	37	19	42838221	42838221	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	42838221	42838221	C	T	SNP	MEGF8	ENST00000251268	human	ensembl	74_37	+1	known	silent	c.414	p.R138	1.000	superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EGF_laminin,pfam_Plexin_repeat,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_CUB_dom,smart_EG-like_dom,smart_Plexin-like_fold,smart_EGF-like_Ca-bd_dom,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin	-	no_errors	MEGF8	HGNC	ENSG00000105429	tier1	-	-	77	0	0.00	45	16	26.23
MEGF8	0	genome.wustl.edu	37	19	42857956	42857956	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	42857956	42857956	G	T	SNP	MEGF8	ENST00000251268	human	ensembl	74_37	+1	known	missense	c.3791	p.G1264V	1.000	superfamily_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EGF_laminin,pfam_Plexin_repeat,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_CUB_dom,smart_EG-like_dom,smart_Plexin-like_fold,smart_EGF-like_Ca-bd_dom,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin	-	no_errors	MEGF8	HGNC	ENSG00000105429				58	0	0.00	50	3	5.56
METTL12	0	genome.wustl.edu	37	11	62434855	62434855	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	62434855	62434855	C	T	SNP	METTL12	ENST00000398922	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	METTL12	HGNC	ENSG00000214756	tier1	-	-	18	0	0.00	6	6	50.00
METTL13	0	genome.wustl.edu	37	1	171757033	171757033	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	171757033	171757033	G	T	SNP	METTL13	ENST00000361735	human	ensembl	74_37	+1	known	missense	c.1272	p.Q424H	1.000	NULL	pfam_Methyltransf_11,pfam_Spermidine/spermine_synthase	-	no_errors	METTL13	HGNC	ENSG00000010165				85	0	0.00	76	4	5.00
METTL15	0	genome.wustl.edu	37	11	28318379	28318379	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	28318379	28318379	G	A	SNP	METTL15	ENST00000303459	human	ensembl	74_37	+1	known	missense	c.679	p.G227R	1.000	pfam_RsmH,superfamily_SAM-dep_MeTrfase_MraW_recog,tigrfam_RsmH	pfam_RsmH,superfamily_SAM-dep_MeTrfase_MraW_recog,tigrfam_RsmH	-	no_errors	METTL15	HGNC	ENSG00000169519	tier1	rs145080229	-	102	0	0.00	44	22	32.84
METTL18	0	genome.wustl.edu	37	1	169762095	169762095	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	169762095	169762095	C	A	SNP	METTL18	ENST00000303469	human	ensembl	74_37	-1	known	missense	c.742	p.D248Y	0.001	NULL	pfam_Nicotinamide_N-MeTfrase-like,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Small_mtfrase_dom	-	no_errors	METTL18	HGNC	ENSG00000171806	tier1	-	-	49	0	0.00	74	16	17.78
METTL21EP	0	genome.wustl.edu	37	13	103544906	103544909	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	103544906	103544909	TTTT	-	DEL	METTL21EP	ENST00000605100	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001:0.000:0.002	-	-	-	no_errors	METTL21EP	HGNC	ENSG00000250878	tier1			39	0	0.00	24	26	52.00
MEX3A	0	genome.wustl.edu	37	1	156051672	156051672	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	156051672	156051672	G	A	SNP	MEX3A	ENST00000532414	human	ensembl	74_37	-1	known	silent	c.118	p.L40	0.984	NULL	pfam_KH_dom_type_1,smart_KH_dom,smart_Znf_RING,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3A	HGNC	ENSG00000254726	tier1	-	-	26	0	0.00	31	10	24.39
MFN2	0	genome.wustl.edu	37	1	12064057	12064057	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	12064057	12064057	G	A	SNP	MFN2	ENST00000235329	human	ensembl	74_37	+1	known	missense	c.1169	p.C390Y	1.000	superfamily_P-loop_NTPase	pfam_Fzo/mitofusin_HR2,pfam_Dynamin_GTPase,superfamily_P-loop_NTPase	-	no_errors	MFN2	HGNC	ENSG00000116688	tier1	-	-	39	0	0.00	27	8	22.86
MFRP	0	genome.wustl.edu	37	11	119213688	119213688	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	119213688	119213688	G	-	DEL	MFRP	ENST00000449574	human	ensembl	74_37	-1	known	frame_shift_del	c.1150	p.H384fs	0.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Frizzled_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_Frizzled_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,smart_Frizzled_dom,pfscan_CUB_dom,pfscan_Frizzled_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	MFRP	HGNC	ENSG00000235718	tier1			22	0	0.00	13	11	45.83
MFSD8	0	genome.wustl.edu	37	4	128854191	128854191	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	128854191	128854191	G	T	SNP	MFSD8	ENST00000296468	human	ensembl	74_37	-1	known	missense	c.812	p.A271D	0.608	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	MFSD8	HGNC	ENSG00000164073	tier1	-	-	58	0	0.00	64	4	5.88
MGAT5B	0	genome.wustl.edu	37	17	74900438	74900438	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	74900438	74900438	C	-	DEL	MGAT5B	ENST00000428789	human	ensembl	74_37	+1	known	frame_shift_del	c.657	p.P221fs	0.987	NULL	superfamily_PyrdxlP-dep_Trfase	-	no_errors	MGAT5B	HGNC	ENSG00000167889	tier1			102	0	0.00	49	17	25.76
MICAL3	0	genome.wustl.edu	37	22	18291687	18291687	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	18291687	18291687	A	C	SNP	MICAL3	ENST00000441493	human	ensembl	74_37	-1	known	missense	c.5573	p.L1858R	1.000	pfam_DUF3585	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,prints_Rng_hydrolase-like	-	no_errors	MICAL3	HGNC	ENSG00000243156	tier1	-	-	44	0	0.00	32	4	11.11
MICAL3	0	genome.wustl.edu	37	22	18387473	18387473	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	18387473	18387473	T	C	SNP	MICAL3	ENST00000441493	human	ensembl	74_37	-1	known	missense	c.397	p.T133A	1.000	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,prints_Rng_hydrolase-like	-	no_errors	MICAL3	HGNC	ENSG00000243156	tier1	-	-	112	0	0.00	44	30	39.47
MICALL2	0	genome.wustl.edu	37	7	1484824	1484824	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	1484824	1484824	C	T	SNP	MICALL2	ENST00000297508	human	ensembl	74_37	-1	known	silent	c.882	p.S294	0.000	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICALL2	HGNC	ENSG00000164877	tier1	-	-	85	0	0.00	31	18	36.73
MIER1	0	genome.wustl.edu	37	1	67425468	67425469	+	RNA	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	67425468	67425469	-	T	INS	MIER1	ENST00000493357	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.365:0.205	-	-	-	no_errors	MIER1	HGNC	ENSG00000198160	tier1			18	0	0.00	23	11	32.35
MIIP	0	genome.wustl.edu	37	1	12089365	12089365	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	12089365	12089365	C	A	SNP	MIIP	ENST00000466860	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIIP	HGNC	ENSG00000116691	tier1	-	-	95	0	0.00	67	40	37.38
MINK1	0	genome.wustl.edu	37	17	4784488	4784488	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	4784488	4784488	A	T	SNP	MINK1	ENST00000355280	human	ensembl	74_37	+1	known	missense	c.242	p.N81I	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	MINK1	HGNC	ENSG00000141503	tier1	-	-	54	0	0.00	25	18	41.86
MIOS	0	genome.wustl.edu	37	7	7612169	7612169	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	7612169	7612169	T	C	SNP	MIOS	ENST00000340080	human	ensembl	74_37	+1	known	silent	c.63	p.C21	1.000	NULL	smart_WD40_repeat	-	no_errors	MIOS	HGNC	ENSG00000164654	tier1	-	-	81	0	0.00	49	30	37.97
MIR1293	0	genome.wustl.edu	37	12	50627995	50627997	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	50627995	50627997	TTT	-	DEL	MIR1293	ENST00000408677	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.541:0.545:0.544	-	-	-	no_errors	MIR1293	HGNC	ENSG00000221604	tier1			17	0	0.00	25	3	10.71
MIR1303	0	genome.wustl.edu	37	5	154065370	154065370	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	154065370	154065370	T	-	DEL	MIR1303	ENST00000408625	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	MIR1303	HGNC	ENSG00000221552	tier1			10	0	0.00	12	4	25.00
MIR133A1	0	genome.wustl.edu	37	18	19408832	19408833	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	19408832	19408833	TT	-	DEL	MIR133A1	ENST00000581072	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MIR133A1	HGNC	ENSG00000265142	tier1			13	0	0.00	10	8	44.44
MIR146A	0	genome.wustl.edu	37	5	159912629	159912629	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	159912629	159912629	G	T	SNP	MIR146A	ENST00000517927	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.022	-	-	-	no_errors	MIR146A	HGNC	ENSG00000253522	tier1	-	-	8	0	0.00	4	5	55.56
MIR205HG	0	genome.wustl.edu	37	1	209605629	209605629	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	209605629	209605629	A	G	SNP	MIR205HG	ENST00000366437	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	MIR205HG	HGNC	ENSG00000230937	tier1	-	-	40	0	0.00	45	10	18.18
MIR3613	0	genome.wustl.edu	37	13	50570574	50570575	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	50570574	50570575	TT	-	DEL	MIR3613	ENST00000579844	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	MIR3613	HGNC	ENSG00000264864	tier1			39	0	0.00	48	15	23.81
MIR3613	0	genome.wustl.edu	37	13	50570605	50570606	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	50570605	50570606	AA	-	DEL	MIR3613	ENST00000579844	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	MIR3613	HGNC	ENSG00000264864	tier1			41	0	0.00	35	16	31.37
MIR3908	0	genome.wustl.edu	37	12	124021036	124021039	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	124021036	124021039	TTTT	-	DEL	MIR3908	ENST00000579798	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.136:0.138:0.140:0.142	-	-	-	no_errors	MIR3908	HGNC	ENSG00000266655	tier1			8	0	0.00	18	4	18.18
MIR3926-2	0	genome.wustl.edu	37	8	12584756	12584756	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	12584756	12584756	A	-	DEL	MIR3926-2	ENST00000578598	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	MIR3926-2	HGNC	ENSG00000266206	tier1			37	0	0.00	41	8	16.33
MIR3938	0	genome.wustl.edu	37	3	55886574	55886574	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	55886574	55886574	A	-	DEL	MIR3938	ENST00000582157	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR3938	HGNC	ENSG00000264013	tier1			33	0	0.00	28	9	24.32
MIR624	0	genome.wustl.edu	37	14	31483858	31483858	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	31483858	31483858	G	T	SNP	MIR624	ENST00000385217	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MIR624	HGNC	ENSG00000207952	tier1	-	-	113	0	0.00	100	11	9.91
MIR644A	0	genome.wustl.edu	37	20	33054130	33054130	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	33054130	33054130	T	-	DEL	MIR644A	ENST00000385262	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.030	-	-	-	no_errors	MIR644A	HGNC	ENSG00000207997	tier1			75	0	0.00	63	35	35.71
MIR663B	0	genome.wustl.edu	37	2	133014620	133014620	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	133014620	133014620	G	A	SNP	MIR663B	ENST00000408361	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	MIR663B	HGNC	ENSG00000221288	tier1	-	-	188	0	0.00	160	19	10.61
MIS18BP1	0	genome.wustl.edu	37	14	45711241	45711241	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	45711241	45711241	T	0	DEL	MIS18BP1	ENST00000310806	human	ensembl	74_37	-1	known	frame_shift_del	c.1139	p.N380fs	0.064	NULL	pfam_SANTA,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MIS18BP1	HGNC	ENSG00000129534				53	0	0.00	72	4	5.26
MITF	0	genome.wustl.edu	37	3	69788686	69788686	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	69788686	69788686	C	A	SNP	MITF	ENST00000461511	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.916	-	-	-	no_errors	MITF	HGNC	ENSG00000187098	tier1	-	-	35	0	0.00	19	10	34.48
MKI67	0	genome.wustl.edu	37	10	129903982	129903982	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	129903982	129903982	G	A	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	missense	c.6122	p.A2041V	0.000	pfam_K167R	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773	tier1	-	-	79	0	0.00	52	42	44.68
MKI67	0	genome.wustl.edu	37	10	129901402	129901402	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	129901402	129901402	C	T	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	missense	c.8702	p.S2901N	0.003	pfam_K167R	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773				44	0	0.00	35	4	10.26
MKL1	0	genome.wustl.edu	37	22	40807711	40807711	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	40807711	40807711	G	T	SNP	MKL1	ENST00000355630	human	ensembl	74_37	-1	known	missense	c.2479	p.L827M	1.000	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL1	HGNC	ENSG00000196588	tier1	-	-	44	0	0.00	29	4	12.12
MKL2	0	genome.wustl.edu	37	16	14346300	14346300	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	14346300	14346300	C	-	DEL	MKL2	ENST00000341243	human	ensembl	74_37	+1	known	frame_shift_del	c.2611	p.R873fs	1.000	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL2	HGNC	ENSG00000186260	tier1			34	0	0.00	21	12	36.36
MKRN2	0	genome.wustl.edu	37	3	12613765	12613765	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	12613765	12613765	T	C	SNP	MKRN2	ENST00000170447	human	ensembl	74_37	+1	known	missense	c.535	p.C179R	1.000	pfam_Znf_CCCH,smart_Znf_CCCH	pfam_Znf_CCCH,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MKRN2	HGNC	ENSG00000075975	tier1	-	-	64	0	0.00	43	18	29.51
MLIP	0	genome.wustl.edu	37	6	54002313	54002313	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	54002313	54002313	G	T	SNP	MLIP	ENST00000502396	human	ensembl	74_37	+1	putative	missense	c.1446	p.Q482H	0.207	NULL	NULL	-	no_errors	MLIP	HGNC	ENSG00000146147	tier1	-	-	27	0	0.00	13	8	38.10
MLLT3	0	genome.wustl.edu	37	9	20363485	20363485	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	20363485	20363485	G	T	SNP	MLLT3	ENST00000380338	human	ensembl	74_37	-1	known	missense	c.1320	p.S440R	1.000	NULL	pfam_YEATS,pfscan_YEATS	-	no_errors	MLLT3	HGNC	ENSG00000171843	tier1	-	-	56	0	0.00	38	5	11.36
MLLT3	0	genome.wustl.edu	37	9	20414367	20414367	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	20414367	20414367	G	A	SNP	MLLT3	ENST00000380338	human	ensembl	74_37	-1	known	silent	c.477	p.S159	1.000	NULL	pfam_YEATS,pfscan_YEATS	-	no_errors	MLLT3	HGNC	ENSG00000171843	tier1	-	-	61	0	0.00	56	7	11.11
MLXIP	0	genome.wustl.edu	37	12	122620180	122620180	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	122620180	122620180	G	-	DEL	MLXIP	ENST00000319080	human	ensembl	74_37	+1	known	frame_shift_del	c.1999	p.G668fs	0.001	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MLXIP	HGNC	ENSG00000175727	tier1			75	0	0.00	40	33	45.21
MMACHC	0	genome.wustl.edu	37	1	45973942	45973942	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	45973942	45973942	G	T	SNP	MMACHC	ENST00000401061	human	ensembl	74_37	+1	known	missense	c.335	p.R112L	1.000	NULL	NULL	-	no_errors	MMACHC	HGNC	ENSG00000132763	tier1	-	-	38	0	0.00	27	4	12.90
MMEL1	0	genome.wustl.edu	37	1	2530095	2530095	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	2530095	2530095	G	T	SNP	MMEL1	ENST00000378412	human	ensembl	74_37	-1	known	silent	c.1176	p.A392	0.950	pfam_Peptidase_M13_N	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	MMEL1	HGNC	ENSG00000142606	tier1	-	-	62	0	0.00	38	4	9.52
MMP24	0	genome.wustl.edu	37	20	33857673	33857673	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	33857673	33857673	G	T	SNP	MMP24	ENST00000246186	human	ensembl	74_37	+1	known	missense	c.1305	p.R435S	0.811	pirsf_Pept_M10A_Metazoans,pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat	pirsf_Pept_M10A_Metazoans,pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP24	HGNC	ENSG00000125966				73	0	0.00	62	4	6.06
MMP9	0	genome.wustl.edu	37	20	44641089	44641089	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	44641089	44641089	G	A	SNP	MMP9	ENST00000372330	human	ensembl	74_37	+1	known	missense	c.1198	p.A400T	0.998	pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo,prints_Pept_M10A	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_PT,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP9	HGNC	ENSG00000100985	tier1	-	-	81	0	0.00	35	21	37.50
MN1	0	genome.wustl.edu	37	22	28196395	28196395	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	28196395	28196395	C	G	SNP	MN1	ENST00000302326	human	ensembl	74_37	-1	known	missense	c.137	p.G46A	1.000	NULL	NULL	-	no_errors	MN1	HGNC	ENSG00000169184	tier1	-	-	53	0	0.00	40	5	11.11
MNS1	0	genome.wustl.edu	37	15	56735707	56735707	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	56735707	56735707	C	T	SNP	MNS1	ENST00000260453	human	ensembl	74_37	-1	known	missense	c.932	p.R311Q	1.000	NULL	NULL	-	no_errors	MNS1	HGNC	ENSG00000138587	tier1	rs140554714	-	39	0	0.00	15	11	42.31
MOB1B	0	genome.wustl.edu	37	4	71840885	71840885	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	71840885	71840885	G	A	SNP	MOB1B	ENST00000309395	human	ensembl	74_37	+1	known	nonsense	c.291	p.W97*	1.000	pfam_Mob1_phocein,superfamily_Mob1_phocein	pfam_Mob1_phocein,superfamily_Mob1_phocein	-	no_errors	MOB1B	HGNC	ENSG00000173542	tier1	-	-	42	0	0.00	48	27	36.00
MOB3A	0	genome.wustl.edu	37	19	2078178	2078178	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	2078178	2078178	C	T	SNP	MOB3A	ENST00000357066	human	ensembl	74_37	-1	known	missense	c.382	p.A128T	1.000	pfam_Mob1_phocein,superfamily_Mob1_phocein	pfam_Mob1_phocein,superfamily_Mob1_phocein	-	no_errors	MOB3A	HGNC	ENSG00000172081	tier1	-	-	46	0	0.00	25	13	34.21
MOCOS	0	genome.wustl.edu	37	18	33836815	33836815	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	33836815	33836815	T	-	DEL	MOCOS	ENST00000588132	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MOCOS	HGNC	ENSG00000075643	tier1			14	0	0.00	10	7	41.18
MOGS	0	genome.wustl.edu	37	2	74692123	74692123	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	74692123	74692123	G	C	SNP	MOGS	ENST00000233616	human	ensembl	74_37	-1	known	missense	c.252	p.D84E	1.000	pfam_Glycoside_hydrolase_63	pfam_Glycoside_hydrolase_63,superfamily_6-hairpin_glycosidase-like	-	no_errors	MOGS	HGNC	ENSG00000115275	tier1	-	-	21	0	0.00	17	5	22.73
MON1A	0	genome.wustl.edu	37	3	49947762	49947762	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	49947762	49947762	T	G	SNP	MON1A	ENST00000296473	human	ensembl	74_37	-1	known	missense	c.1460	p.D487A	0.989	pfam_Vacuolar_fusion_protein_MON1	pfam_Vacuolar_fusion_protein_MON1,superfamily_Longin-like_dom,prints_Vacuolar_fusion_protein_MON1	-	no_errors	MON1A	HGNC	ENSG00000164077	tier1	-	-	23	0	0.00	21	9	30.00
MORC3	0	genome.wustl.edu	37	21	37711111	37711111	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	37711111	37711111	C	T	SNP	MORC3	ENST00000400485	human	ensembl	74_37	+1	known	missense	c.500	p.A167V	0.893	superfamily_HATPase_ATP-bd	pfam_Znf_CW,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,pfscan_Znf_CW	-	no_errors	MORC3	HGNC	ENSG00000159256	tier1	-	-	45	0	0.00	20	11	35.48
MORN1	0	genome.wustl.edu	37	1	2318863	2318863	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	2318863	2318863	C	T	SNP	MORN1	ENST00000378531	human	ensembl	74_37	-1	known	missense	c.353	p.R118Q	0.829	pfam_MORN,smart_MORN	pfam_MORN,smart_MORN	-	no_errors	MORN1	HGNC	ENSG00000116151	tier1	rs146451358	-	55	0	0.00	32	28	46.67
MOS	0	genome.wustl.edu	37	8	57026410	57026410	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	57026410	57026410	C	T	SNP	MOS	ENST00000311923	human	ensembl	74_37	-1	known	silent	c.132	p.P44	0.019	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MOS	HGNC	ENSG00000172680	tier1	-	-	22	0	0.00	23	6	20.69
MOSPD1	0	genome.wustl.edu	37	X	134033048	134033048	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	134033048	134033048	T	-	DEL	MOSPD1	ENST00000462060	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MOSPD1	HGNC	ENSG00000101928	tier1			22	0	0.00	5	14	73.68
MOSPD1	0	genome.wustl.edu	37	X	134033227	134033227	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	134033227	134033227	T	-	DEL	MOSPD1	ENST00000462060	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MOSPD1	HGNC	ENSG00000101928	tier1			20	0	0.00	10	9	47.37
MOXD1	0	genome.wustl.edu	37	6	132722421	132722421	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	132722421	132722421	C	T	SNP	MOXD1	ENST00000367963	human	ensembl	74_37	-1	known	missense	c.145	p.A49T	0.979	pfam_DOMON_domain,smart_DOMON_domain,pfscan_DOMON_domain	pfam_Cu2_ascorb_mOase_N,pfam_DOMON_domain,superfamily_PHM/PNGase_F_dom,smart_DOMON_domain,pfscan_DOMON_domain,prints_Dopamine_b_mOase	-	no_errors	MOXD1	HGNC	ENSG00000079931	tier1	-	-	10	0	0.00	5	8	61.54
MPHOSPH9	0	genome.wustl.edu	37	12	123706322	123706322	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	123706322	123706322	A	-	DEL	MPHOSPH9	ENST00000392425	human	ensembl	74_37	-1	known	frame_shift_del	c.13	p.S5fs	0.977	NULL	superfamily_Prefoldin	-	no_errors	MPHOSPH9	HGNC	ENSG00000051825	tier1			72	0	0.00	67	30	30.93
MPHOSPH9	0	genome.wustl.edu	37	12	123641367	123641367	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	123641367	123641367	G	T	SNP	MPHOSPH9	ENST00000392425	human	ensembl	74_37	-1	known	missense	c.3083	p.S1028Y	1.000	NULL	superfamily_Prefoldin	-	no_errors	MPHOSPH9	HGNC	ENSG00000051825				21	0	0.00	39	3	7.14
MPP6	0	genome.wustl.edu	37	7	24708156	24708156	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	24708156	24708156	G	T	SNP	MPP6	ENST00000222644	human	ensembl	74_37	+1	known	missense	c.991	p.A331S	1.000	NULL	pfam_GK/Ca_channel_bsu,pfam_L27_C,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	MPP6	HGNC	ENSG00000105926	tier1	-	-	56	0	0.00	76	8	9.52
MPP7	0	genome.wustl.edu	37	10	28348538	28348538	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	28348538	28348538	A	-	DEL	MPP7	ENST00000496637	human	ensembl	74_37	-1	known	frame_shift_del	c.1339	p.Y447fs	0.021	NULL	pfam_L27_C,pfam_GK/Ca_channel_bsu,pfam_PDZ,pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_PDZ,superfamily_P-loop_NTPase,smart_L27,smart_PDZ,smart_SH3_domain,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like,prints_SH3_domain	-	no_errors	MPP7	HGNC	ENSG00000150054	tier1			51	0	0.00	45	14	23.73
MPPED2	0	genome.wustl.edu	37	11	30433064	30433064	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	30433064	30433064	G	A	SNP	MPPED2	ENST00000358117	human	ensembl	74_37	-1	known	missense	c.836	p.P279L	1.000	NULL	pfam_PEstase_dom	-	no_errors	MPPED2	HGNC	ENSG00000066382	tier1	-	-	97	0	0.00	77	6	7.23
MPRIP	0	genome.wustl.edu	37	17	17035001	17035001	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	17035001	17035001	C	-	DEL	MPRIP	ENST00000395811	human	ensembl	74_37	+1	known	frame_shift_del	c.490	p.T166fs	1.000	NULL	pfam_Pleckstrin_homology,superfamily_Ferritin-like_SF,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	MPRIP	HGNC	ENSG00000133030	tier1			64	0	0.00	34	15	30.61
MRAP	0	genome.wustl.edu	37	21	33684112	33684112	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	33684112	33684112	G	A	SNP	MRAP	ENST00000303645	human	ensembl	74_37	+1	known	silent	c.324	p.A108	0.000	NULL	NULL	-	no_errors	MRAP	HGNC	ENSG00000170262	tier1	-	-	34	0	0.00	21	11	34.38
MRGPRF	0	genome.wustl.edu	37	11	68772931	68772931	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	68772931	68772931	T	C	SNP	MRGPRF	ENST00000309099	human	ensembl	74_37	-1	known	missense	c.847	p.N283D	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	MRGPRF	HGNC	ENSG00000172935	tier1	-	-	15	0	0.00	6	6	50.00
MRPL15	0	genome.wustl.edu	37	8	55055256	55055256	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	55055256	55055256	G	T	SNP	MRPL15	ENST00000260102	human	ensembl	74_37	+1	known	nonsense	c.463	p.E155*	1.000	pfam_Ribosomal_L18e/L15P,superfamily_Ribosomal_L18e/L15P	pfam_Ribosomal_L18e/L15P,superfamily_Ribosomal_L18e/L15P	-	no_errors	MRPL15	HGNC	ENSG00000137547				56	0	0.00	76	4	5.00
MRPL32	0	genome.wustl.edu	37	7	42977165	42977165	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	42977165	42977165	C	T	SNP	MRPL32	ENST00000223324	human	ensembl	74_37	+1	known	missense	c.557	p.T186I	1.000	NULL	pfam_Ribosomal_L32p,superfamily_Ribosomal_zn-bd	-	no_errors	MRPL32	HGNC	ENSG00000106591	tier1	-	-	13	0	0.00	14	7	33.33
MRS2	0	genome.wustl.edu	37	6	24415278	24415278	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	24415278	24415278	G	T	SNP	MRS2	ENST00000443868	human	ensembl	74_37	+1	known	silent	c.615	p.G205	1.000	NULL	NULL	-	no_errors	MRS2	HGNC	ENSG00000124532	tier1	-	-	52	0	0.00	55	5	8.33
MS4A14	0	genome.wustl.edu	37	11	60165441	60165441	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	60165441	60165441	G	T	SNP	MS4A14	ENST00000300187	human	ensembl	74_37	+1	known	missense	c.255	p.W85C	1.000	pfam_CD20-like	pfam_CD20-like	-	no_errors	MS4A14	HGNC	ENSG00000166928				65	0	0.00	73	4	5.19
MSH4	0	genome.wustl.edu	37	1	76288248	76288248	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	76288248	76288248	T	-	DEL	MSH4	ENST00000263187	human	ensembl	74_37	+1	known	frame_shift_del	c.1144	p.F383fs	1.000	pfam_DNA_mismatch_repair_MutS_core,superfamily_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_core	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH4	HGNC	ENSG00000057468	tier1			29	0	0.00	29	10	25.64
MSH6	0	genome.wustl.edu	37	2	48025912	48025912	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	48025912	48025912	G	A	SNP	MSH6	ENST00000234420	human	ensembl	74_37	+1	known	missense	c.790	p.E264K	1.000	pirsf_DNA_mismatch_repair_Msh6	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_core,pfam_PWWP_dom,pfam_DNA_mismatch_repair_MutS_clamp,pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_PWWP_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C,pirsf_DNA_mismatch_repair_Msh6,pfscan_PWWP_dom	-	no_errors	MSH6	HGNC	ENSG00000116062	tier1	-	-	21	0	0.00	16	7	30.43
MSMO1	0	genome.wustl.edu	37	4	166259012	166259012	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	166259012	166259012	G	T	SNP	MSMO1	ENST00000261507	human	ensembl	74_37	+1	known	missense	c.327	p.Q109H	1.000	NULL	pfam_Fatty_acid_hydroxylase	-	no_errors	MSMO1	HGNC	ENSG00000052802	tier1	-	-	57	0	0.00	72	4	5.26
MSN	0	genome.wustl.edu	37	X	64955272	64955272	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	64955272	64955272	G	T	SNP	MSN	ENST00000360270	human	ensembl	74_37	+1	known	missense	c.939	p.K313N	1.000	pirsf_ERM	pirsf_ERM,pfam_ERM_C_dom,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,superfamily_Moesin_tail,smart_Band_41_domain,prints_Ez/rad/moesin_like,prints_Band_41_fam,pfscan_FERM_domain	-	no_errors	MSN	HGNC	ENSG00000147065	tier1	-	-	42	0	0.00	9	25	73.53
MSR1	0	genome.wustl.edu	37	8	16012654	16012654	+	Splice_Site	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	16012654	16012654	C	A	SNP	MSR1	ENST00000262101	human	ensembl	74_37	-1	known	splice_site	c.818-1	e5-1	1.000	-	-	-	no_errors	MSR1	HGNC	ENSG00000038945	tier1	-	-	41	0	0.00	50	22	30.56
MSRB1	0	genome.wustl.edu	37	16	1991122	1991122	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	1991122	1991122	C	A	SNP	MSRB1	ENST00000399753	human	ensembl	74_37	-1	putative	missense	c.340	p.G114W	0.000	NULL	pfam_Met_Sox_Rdtase_MsrB,superfamily_Mss4-like	-	no_errors	MSRB1	HGNC	ENSG00000198736	tier1	-	-	38	0	0.00	23	13	36.11
MST1	0	genome.wustl.edu	37	3	49724603	49724603	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	49724603	49724603	C	T	SNP	MST1	ENST00000449682	human	ensembl	74_37	-1	known	missense	c.586	p.G196S	1.000	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	MST1	HGNC	ENSG00000173531	tier1	-	-	68	0	0.00	27	17	38.64
MSX1	0	genome.wustl.edu	37	4	4864475	4864475	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	4864475	4864475	C	T	SNP	MSX1	ENST00000382723	human	ensembl	74_37	+1	known	missense	c.517	p.R173C	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	MSX1	HGNC	ENSG00000163132	tier1	-	-	44	0	0.00	17	22	56.41
MTERF	0	genome.wustl.edu	37	7	91509449	91509449	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	91509449	91509449	A	-	DEL	MTERF	ENST00000481516	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	MTERF	HGNC	ENSG00000127989	tier1			19	0	0.00	14	4	22.22
MTHFD1L	0	genome.wustl.edu	37	6	151331085	151331085	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	151331085	151331085	C	T	SNP	MTHFD1L	ENST00000367321	human	ensembl	74_37	+1	known	silent	c.2256	p.G752	0.093	pfam_Formate_THF_ligase,superfamily_P-loop_NTPase	pfam_Formate_THF_ligase,pfam_THF_DH/CycHdrlase_NAD-bd_dom,pfam_THF_DH/CycHdrlase_cat_dom,superfamily_P-loop_NTPase,prints_THF_DH/CycHdrlase	-	no_errors	MTHFD1L	HGNC	ENSG00000120254	tier1	-	-	18	0	0.00	8	13	61.90
MTHFD2L	0	genome.wustl.edu	37	4	75041109	75041109	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	75041109	75041109	T	C	SNP	MTHFD2L	ENST00000395759	human	ensembl	74_37	+1	known	missense	c.440	p.L147S	1.000	pfam_THF_DH/CycHdrlase_cat_dom,prints_THF_DH/CycHdrlase	pfam_THF_DH/CycHdrlase_NAD-bd_dom,pfam_THF_DH/CycHdrlase_cat_dom,prints_THF_DH/CycHdrlase	-	no_errors	MTHFD2L	HGNC	ENSG00000163738	tier1	-	-	85	0	0.00	75	9	10.71
MTMR2	0	genome.wustl.edu	37	11	95568534	95568535	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	95568534	95568535	TC	-	DEL	MTMR2	ENST00000346299	human	ensembl	74_37	-1	known	frame_shift_del	c.1852_1851	p.E617fs	1.000:0.986	NULL	pfam_Myotubularin-like_Pase_dom,pfam_GRAM,smart_GRAM,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTMR2	HGNC	ENSG00000087053	tier1			37	0	0.00	46	12	20.69
MTMR3	0	genome.wustl.edu	37	22	30415781	30415781	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	30415781	30415781	C	T	SNP	MTMR3	ENST00000401950	human	ensembl	74_37	+1	known	silent	c.2133	p.G711	0.000	NULL	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Tyr_Pase_cat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	MTMR3	HGNC	ENSG00000100330	tier1	-	-	17	0	0.00	15	9	37.50
MTMR4	0	genome.wustl.edu	37	17	56573108	56573108	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	56573108	56573108	G	T	SNP	MTMR4	ENST00000323456	human	ensembl	74_37	-1	known	missense	c.2395	p.L799I	0.006	NULL	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTMR4	HGNC	ENSG00000108389				49	0	0.00	47	4	7.84
MTMR6	0	genome.wustl.edu	37	13	25831386	25831386	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	25831386	25831386	G	T	SNP	MTMR6	ENST00000381801	human	ensembl	74_37	-1	known	missense	c.1043	p.S348Y	1.000	smart_Tyr_Pase_cat	pfam_Myotubularin-like_Pase_dom,smart_Tyr_Pase_cat	-	no_errors	MTMR6	HGNC	ENSG00000139505	tier1	-	-	36	0	0.00	44	4	8.33
MTMR9	0	genome.wustl.edu	37	8	11172559	11172560	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	11172559	11172560	AG	-	DEL	MTMR9	ENST00000221086	human	ensembl	74_37	+1	known	frame_shift_del	c.1099_1100	p.E368fs	1.000:1.000	NULL	pfam_Myotubularin-like_Pase_dom	-	no_errors	MTMR9	HGNC	ENSG00000104643	tier1			81	0	0.00	71	22	23.66
MTNR1B	0	genome.wustl.edu	37	11	92715303	92715303	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	92715303	92715303	C	T	SNP	MTNR1B	ENST00000257068	human	ensembl	74_37	+1	known	missense	c.914	p.A305V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Melatonin_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_Mel_1A_rcpt	-	no_errors	MTNR1B	HGNC	ENSG00000134640	tier1	-	-	53	0	0.00	32	18	36.00
MTOR	0	genome.wustl.edu	37	1	11204705	11204705	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	11204705	11204705	C	A	SNP	MTOR	ENST00000361445	human	ensembl	74_37	-1	known	missense	c.4872	p.Q1624H	1.000	pfam_PIK-rel_kinase_FAT,pfscan_PIK_FAT	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_Rapamycin-bd_dom,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_Rapamycin-bd_dom,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793	tier1	-	-	46	0	0.00	13	11	45.83
MTR	0	genome.wustl.edu	37	1	237061140	237061140	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	237061140	237061140	T	-	DEL	MTR	ENST00000470570	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MTR	HGNC	ENSG00000116984	tier1			17	0	0.00	15	3	16.67
MTRF1	0	genome.wustl.edu	37	13	41826691	41826691	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	41826691	41826691	A	-	DEL	MTRF1	ENST00000239852	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MTRF1	HGNC	ENSG00000120662	tier1			17	0	0.00	6	19	76.00
MTRF1L	0	genome.wustl.edu	37	6	153311100	153311100	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	153311100	153311100	T	C	SNP	MTRF1L	ENST00000367233	human	ensembl	74_37	-1	known	missense	c.1073	p.E358G	1.000	NULL	pfam_Pep_chain_release_fac_I_II,pfam_PCRF,smart_PCRF	-	no_errors	MTRF1L	HGNC	ENSG00000112031	tier1	-	-	66	0	0.00	46	23	33.33
MTSS1	0	genome.wustl.edu	37	8	125597329	125597329	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	125597329	125597329	T	-	DEL	MTSS1	ENST00000518547	human	ensembl	74_37	-1	known	frame_shift_del	c.459	p.R155fs	1.000	pfam_IRSp53/MIM_homology_IMD	pfam_IRSp53/MIM_homology_IMD,pfscan_WH2_dom	-	no_errors	MTSS1	HGNC	ENSG00000170873	tier1			54	0	0.00	88	24	21.43
MTUS1	0	genome.wustl.edu	37	8	17504627	17504627	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	17504627	17504627	A	-	DEL	MTUS1	ENST00000518889	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	MTUS1	HGNC	ENSG00000129422	tier1			24	0	0.00	16	11	40.74
MTX1	0	genome.wustl.edu	37	1	155180357	155180357	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	155180357	155180357	G	A	SNP	MTX1	ENST00000368376	human	ensembl	74_37	+1	known	missense	c.617	p.R206Q	0.982	pfam_Sam37/metaxin	pfam_Sam37/metaxin,superfamily_Glutathione-S-Trfase_C-like	-	no_errors	MTX1	HGNC	ENSG00000173171	tier1	-	-	101	0	0.00	84	41	32.54
MUC12	0	genome.wustl.edu	37	7	100648029	100648029	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	100648029	100648029	A	T	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.14185	p.A4729S	0.000	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277				75	0	0.00	40	31	43.66
MUC16	0	genome.wustl.edu	37	19	9069367	9069367	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	9069367	9069367	A	G	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.18079	p.S6027P	0.240	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	24	0	0.00	27	5	15.62
MUC16	0	genome.wustl.edu	37	19	9089043	9089043	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	9089043	9089043	G	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.2772	p.S924R	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	70	0	0.00	44	31	41.33
MUC17	0	genome.wustl.edu	37	7	100685146	100685146	+	Silent	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	100685146	100685146	T	G	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	silent	c.10449	p.V3483	0.001	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876	tier1	-	-	102	0	0.00	53	44	45.36
MUC2	0	genome.wustl.edu	37	11	1093922	1093922	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	1093922	1093922	C	T	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	missense	c.5741	p.T1914M	0.002	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788	tier1	-	-	57	0	0.00	17	11	39.29
MUC2	0	genome.wustl.edu	37	11	1102508	1102508	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	1102508	1102508	C	T	SNP	MUC2	ENST00000441003	human	ensembl	74_37	+1	known	missense	c.7892	p.T2631M	0.775	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,superfamily_Prot_inh_PMP,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC2	HGNC	ENSG00000198788	tier1	-	-	31	0	0.00	16	5	23.81
MUC5B	0	genome.wustl.edu	37	11	1263254	1263254	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	1263254	1263254	C	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.5153	p.P1718H	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	36	0	0.00	15	4	21.05
MUM1L1	0	genome.wustl.edu	37	X	105451090	105451090	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	105451090	105451090	C	-	DEL	MUM1L1	ENST00000337685	human	ensembl	74_37	+1	known	frame_shift_del	c.1665	p.L556fs	0.387	NULL	superfamily_PyrdxlP-dep_Trfase	-	no_errors	MUM1L1	HGNC	ENSG00000157502	tier1			16	0	0.00	3	6	66.67
MUM1L1	0	genome.wustl.edu	37	X	105451232	105451232	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	105451232	105451232	G	T	SNP	MUM1L1	ENST00000337685	human	ensembl	74_37	+1	known	nonsense	c.1807	p.E603*	1.000	superfamily_PyrdxlP-dep_Trfase	superfamily_PyrdxlP-dep_Trfase	-	no_errors	MUM1L1	HGNC	ENSG00000157502	tier1	-	-	19	0	0.00	16	3	15.79
MUT	0	genome.wustl.edu	37	6	49423796	49423796	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	49423796	49423796	G	T	SNP	MUT	ENST00000274813	human	ensembl	74_37	-1	known	missense	c.908	p.P303Q	1.000	pfam_MeMalonylCoA_mutase_a/b_cat,superfamily_Cbl-dep_enz_cat,tigrfam_MMCoA_mutase_a_cat	pfam_MeMalonylCoA_mutase_a/b_cat,pfam_Cobalamin-bd,superfamily_Cbl-dep_enz_cat,superfamily_Cobalamin-bd,tigrfam_MMCoA_mutase_a_cat,tigrfam_Acid_CoA_mut_C	-	no_errors	MUT	HGNC	ENSG00000146085	tier1	-	-	51	0	0.00	61	4	6.15
MVK	0	genome.wustl.edu	37	12	110019240	110019240	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	110019240	110019240	C	-	DEL	MVK	ENST00000228510	human	ensembl	74_37	+1	known	frame_shift_del	c.412	p.A141fs	1.000	pfam_GHMP_kinase_N_dom,superfamily_Ribosomal_S5_D2-typ_fold,prints_Mevalonate/galactokinase,prints_Galkinase,tigrfam_Mev_gal_kin	pfam_GHMP_kinase_N_dom,pfam_GHMP_kinase_C_dom,superfamily_Ribosomal_S5_D2-typ_fold,prints_Mevalonate/galactokinase,prints_Galkinase,tigrfam_Mev_gal_kin	-	no_errors	MVK	HGNC	ENSG00000110921	tier1			51	0	0.00	22	15	40.54
MVP	0	genome.wustl.edu	37	16	29855904	29855904	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	29855904	29855904	C	T	SNP	MVP	ENST00000357402	human	ensembl	74_37	+1	known	silent	c.1725	p.I575	0.770	pfam_MVP_shoulder	pfam_Vault_N,pfam_MVP_shoulder	-	no_errors	MVP	HGNC	ENSG00000013364	tier1	-	-	52	0	0.00	34	15	30.61
MXI1	0	genome.wustl.edu	37	10	112045287	112045287	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	112045287	112045287	T	-	DEL	MXI1	ENST00000485566	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MXI1	HGNC	ENSG00000119950	tier1			17	0	0.00	16	6	27.27
MXI1	0	genome.wustl.edu	37	10	112046251	112046254	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	112046251	112046254	AAAA	-	DEL	MXI1	ENST00000485566	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000:0.998:0.431	-	-	-	no_errors	MXI1	HGNC	ENSG00000119950	tier1			94	0	0.00	71	29	29.00
MYCBP2-AS1	0	genome.wustl.edu	37	13	77661891	77661891	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	77661891	77661891	A	-	DEL	MYCBP2-AS1	ENST00000422231	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MYCBP2-AS1	HGNC	ENSG00000236051	tier1			12	0	0.00	11	4	26.67
MYEF2	0	genome.wustl.edu	37	15	48441553	48441553	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	48441553	48441553	C	T	SNP	MYEF2	ENST00000324324	human	ensembl	74_37	-1	known	missense	c.1394	p.S465N	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	MYEF2	HGNC	ENSG00000104177	tier1	rs200959924	-	22	0	0.00	15	5	25.00
MYH11	0	genome.wustl.edu	37	16	15820795	15820797	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	15820795	15820797	CTT	-	DEL	MYH11	ENST00000396324	human	ensembl	74_37	-1	known	in_frame_del	c.3789_3787	p.K1263in_frame_del	1.000:1.000:1.000	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH11	HGNC	ENSG00000133392	tier1			72	0	0.00	40	21	34.43
MYH11	0	genome.wustl.edu	37	16	15857682	15857682	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	15857682	15857682	G	T	SNP	MYH11	ENST00000396324	human	ensembl	74_37	-1	known	missense	c.1121	p.T374K	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH11	HGNC	ENSG00000133392	tier1	-	-	70	0	0.00	51	5	8.93
MYH13	0	genome.wustl.edu	37	17	10216613	10216613	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	10216613	10216613	C	A	SNP	MYH13	ENST00000252172	human	ensembl	74_37	-1	known	missense	c.4043	p.R1348L	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH13	HGNC	ENSG00000006788	tier1	-	-	110	0	0.00	68	22	24.18
MYH14	0	genome.wustl.edu	37	19	50783570	50783570	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	50783570	50783570	G	A	SNP	MYH14	ENST00000262269	human	ensembl	74_37	+1	known	missense	c.4220	p.R1407H	0.992	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH14	HGNC	ENSG00000105357	tier1	-	-	78	0	0.00	34	21	38.18
MYH4	0	genome.wustl.edu	37	17	10356509	10356509	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	10356509	10356509	A	G	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	missense	c.3071	p.L1024P	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424	tier1	rs150138598	-	208	0	0.00	145	79	35.27
MYH4	0	genome.wustl.edu	37	17	10370033	10370033	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	10370033	10370033	A	-	DEL	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	frame_shift_del	c.30	p.F10fs	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424	tier1			40	0	0.00	34	16	32.00
MYL10	0	genome.wustl.edu	37	7	101259565	101259565	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	101259565	101259565	C	A	SNP	MYL10	ENST00000223167	human	ensembl	74_37	-1	known	missense	c.468	p.E156D	1.000	pfscan_EF_hand_dom	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MYL10	HGNC	ENSG00000106436	tier1	-	-	108	0	0.00	56	33	37.08
MYLK3	0	genome.wustl.edu	37	16	46746626	46746626	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	46746626	46746626	A	G	SNP	MYLK3	ENST00000394809	human	ensembl	74_37	-1	known	missense	c.2048	p.V683A	0.999	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MYLK3	HGNC	ENSG00000140795	tier1	-	-	40	0	0.00	17	12	41.38
MYO15A	0	genome.wustl.edu	37	17	18023733	18023733	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	18023733	18023733	G	A	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.1619	p.R540H	0.913	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536	tier1	-	-	31	0	0.00	13	9	40.91
MYO15B	0	genome.wustl.edu	37	17	73616646	73616646	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	73616646	73616646	G	A	SNP	MYO15B	ENST00000578382	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.388	-	-	-	no_errors	MYO15B	HGNC	ENSG00000266714	tier1	-	-	66	0	0.00	21	18	46.15
MYO16	0	genome.wustl.edu	37	13	109661386	109661386	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	109661386	109661386	T	-	DEL	MYO16	ENST00000356711	human	ensembl	74_37	+1	known	frame_shift_del	c.2518	p.F842fs	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO16	HGNC	ENSG00000041515	tier1			48	0	0.00	43	36	45.57
MYO16	0	genome.wustl.edu	37	13	109792622	109792622	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	109792622	109792622	G	A	SNP	MYO16	ENST00000356711	human	ensembl	74_37	+1	known	silent	c.3996	p.R1332	0.925	NULL	pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO16	HGNC	ENSG00000041515	tier1	-	-	33	0	0.00	25	13	34.21
MYO18A	0	genome.wustl.edu	37	17	27401360	27401360	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	27401360	27401360	C	T	SNP	MYO18A	ENST00000529578	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MYO18A	HGNC	ENSG00000196535	tier1	-	-	20	0	0.00	12	9	42.86
MYO18A	0	genome.wustl.edu	37	17	27448877	27448877	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	27448877	27448877	C	T	SNP	MYO18A	ENST00000354329	human	ensembl	74_37	-1	known	missense	c.1186	p.V396I	0.949	superfamily_P-loop_NTPase	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_PDZ,superfamily_P-loop_NTPase,superfamily_PDZ,superfamily_Regulat_G_prot_signal_superfam,smart_PDZ,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_PDZ,pfscan_RecA_monomer-monomer_interface,prints_Myosin_head_motor_dom	-	no_errors	MYO18A	HGNC	ENSG00000196535	tier1	-	-	59	0	0.00	22	13	37.14
MYO18B	0	genome.wustl.edu	37	22	26173631	26173631	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	26173631	26173631	C	T	SNP	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	missense	c.1951	p.R651W	0.992	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tRNA-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454	tier1	-	-	139	0	0.00	59	43	42.16
MYO18B	0	genome.wustl.edu	37	22	26239856	26239856	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	26239856	26239856	A	-	DEL	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	frame_shift_del	c.3363	p.R1123fs	0.001	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tRNA-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454	tier1			38	0	0.00	30	2	6.25
MYO18B	0	genome.wustl.edu	37	22	26422673	26422673	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	26422673	26422673	A	G	SNP	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	missense	c.6733	p.S2245G	0.870	NULL	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tRNA-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454	tier1	-	-	38	0	0.00	18	6	25.00
MYO18B	0	genome.wustl.edu	37	22	26423570	26423570	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	26423570	26423570	G	A	SNP	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	missense	c.7630	p.E2544K	0.001	NULL	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tRNA-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454	tier1	-	-	27	0	0.00	11	8	42.11
MYO19	0	genome.wustl.edu	37	17	34862904	34862904	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	34862904	34862904	G	-	DEL	MYO19	ENST00000431794	human	ensembl	74_37	-1	known	frame_shift_del	c.1542	p.C515fs	0.926	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO19	HGNC	ENSG00000141140	tier1			52	0	0.00	35	16	31.37
MYO1A	0	genome.wustl.edu	37	12	57422573	57422573	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	57422573	57422573	T	-	DEL	MYO1A	ENST00000300119	human	ensembl	74_37	-1	known	frame_shift_del	c.3098	p.K1033fs	1.000	pfam_Myosin_tail_2	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYO1A	HGNC	ENSG00000166866	tier1			77	0	0.00	52	23	30.67
MYO1C	0	genome.wustl.edu	37	17	1386310	1386310	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	1386310	1386310	G	A	SNP	MYO1C	ENST00000359786	human	ensembl	74_37	-1	known	missense	c.391	p.R131C	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO1C	HGNC	ENSG00000197879	tier1	rs200048542	-	55	0	0.00	37	15	28.85
MYO5C	0	genome.wustl.edu	37	15	52571792	52571792	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	52571792	52571792	G	A	SNP	MYO5C	ENST00000261839	human	ensembl	74_37	-1	known	missense	c.218	p.T73M	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5C	HGNC	ENSG00000128833	tier1	-	-	44	0	0.00	34	19	35.85
MYO6	0	genome.wustl.edu	37	6	76591494	76591494	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	76591494	76591494	G	A	SNP	MYO6	ENST00000369981	human	ensembl	74_37	+1	known	missense	c.2375	p.R792H	1.000	superfamily_P-loop_NTPase	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO6	HGNC	ENSG00000196586	tier1	-	-	118	0	0.00	54	49	47.57
MYO7A	0	genome.wustl.edu	37	11	76901075	76901075	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	76901075	76901075	A	T	SNP	MYO7A	ENST00000409709	human	ensembl	74_37	+1	known	missense	c.3641	p.N1214I	1.000	pfam_MyTH4_dom,smart_MyTH4_dom,pfscan_MyTH4_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_FERM_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7A	HGNC	ENSG00000137474	tier1	-	-	90	0	0.00	42	17	28.81
MYOD1	0	genome.wustl.edu	37	11	17741518	17741518	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	17741518	17741518	G	A	SNP	MYOD1	ENST00000250003	human	ensembl	74_37	+1	known	silent	c.189	p.S63	0.801	pfam_Basic,smart_Basic	pfam_Basic,pfam_Myf5,pfam_bHLH_dom,superfamily_bHLH_dom,smart_Basic,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MYOD1	HGNC	ENSG00000129152	tier1	-	-	28	0	0.00	10	4	28.57
MYOM1	0	genome.wustl.edu	37	18	3135553	3135554	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	3135553	3135554	-	C	INS	MYOM1	ENST00000356443	human	ensembl	74_37	-1	known	frame_shift_ins	c.2201_2200	p.D734fs	1.000:1.000	superfamily_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM1	HGNC	ENSG00000101605	tier1			27	0	0.00	16	8	33.33
MYOM2	0	genome.wustl.edu	37	8	2044147	2044147	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	2044147	2044147	T	C	SNP	MYOM2	ENST00000262113	human	ensembl	74_37	+1	known	missense	c.2186	p.L729P	0.996	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM2	HGNC	ENSG00000036448	tier1	-	-	69	0	0.00	63	40	38.83
MYOM2	0	genome.wustl.edu	37	8	2088683	2088683	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	2088683	2088683	G	-	DEL	MYOM2	ENST00000262113	human	ensembl	74_37	+1	known	frame_shift_del	c.3838	p.S1282fs	1.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM2	HGNC	ENSG00000036448	tier1			42	0	0.00	43	11	20.37
MYRF	0	genome.wustl.edu	37	11	61539013	61539013	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	61539013	61539013	C	-	DEL	MYRF	ENST00000278836	human	ensembl	74_37	+1	known	frame_shift_del	c.782	p.S264fs	1.000	NULL	pfam_NDT80_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd	-	no_errors	MYRF	HGNC	ENSG00000124920	tier1			70	0	0.00	28	27	49.09
NAA25	0	genome.wustl.edu	37	12	112486138	112486138	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	112486138	112486138	C	T	SNP	NAA25	ENST00000261745	human	ensembl	74_37	-1	known	missense	c.1838	p.R613H	1.000	pfam_N-acetylTrfase_B_cplx_non-cat	pfam_N-acetylTrfase_B_cplx_non-cat,pfscan_TPR-contain_dom	-	no_errors	NAA25	HGNC	ENSG00000111300	tier1	-	-	38	0	0.00	24	22	47.83
NADK	0	genome.wustl.edu	37	1	1688163	1688163	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	1688163	1688163	C	-	DEL	NADK	ENST00000492768	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NADK	HGNC	ENSG00000008130	tier1			22	0	0.00	15	13	46.43
NALCN	0	genome.wustl.edu	37	13	101742266	101742266	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	101742266	101742266	C	T	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	silent	c.3321	p.A1107	0.066	pfam_Ion_trans_dom	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452	tier1	-	-	47	0	0.00	41	13	24.07
NALCN	0	genome.wustl.edu	37	13	101763504	101763504	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	101763504	101763504	C	T	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	missense	c.2266	p.V756M	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452	tier1	rs149203278	-	81	0	0.00	62	14	18.42
NAMPT	0	genome.wustl.edu	37	7	105909653	105909653	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	105909653	105909653	C	A	SNP	NAMPT	ENST00000222553	human	ensembl	74_37	-1	known	missense	c.553	p.G185C	1.000	superfamily_Quinolinate_PRibosylTrfase_C,pirsf_Nicotinamide_PRibTrfase	pfam_Nic_PRibTrfase-Fam,superfamily_Quinolinate_PRibosylTrfase_C,pirsf_Nicotinamide_PRibTrfase	-	no_errors	NAMPT	HGNC	ENSG00000105835	tier1	-	-	75	0	0.00	53	14	20.90
NAPB	0	genome.wustl.edu	37	20	23360531	23360531	+	Silent	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	23360531	23360531	A	C	SNP	NAPB	ENST00000377026	human	ensembl	74_37	-1	known	silent	c.708	p.T236	0.996	prints_NSF_attach	prints_NSF_attach	-	no_errors	NAPB	HGNC	ENSG00000125814	tier1	-	-	22	0	0.00	17	4	19.05
NAPSB	0	genome.wustl.edu	37	19	50837602	50837602	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	50837602	50837602	C	-	DEL	NAPSB	ENST00000527780	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.853	-	-	-	no_errors	NAPSB	HGNC	ENSG00000131401	tier1			78	0	0.00	47	33	41.25
NAT10	0	genome.wustl.edu	37	11	34158541	34158541	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	34158541	34158541	G	T	SNP	NAT10	ENST00000257829	human	ensembl	74_37	+1	known	nonsense	c.2179	p.G727*	1.000	superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_Helicase_dom,pfam_DUF1726,superfamily_Acyl_CoA_acyltransferase,superfamily_P-loop_NTPase,pfscan_GNAT_dom	-	no_errors	NAT10	HGNC	ENSG00000135372	tier1	-	-	82	0	0.00	67	5	6.94
NAV2	0	genome.wustl.edu	37	11	19735426	19735426	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	19735426	19735426	T	G	SNP	NAV2	ENST00000396087	human	ensembl	74_37	+1	known	missense	c.185	p.V62G	0.964	superfamily_CH-domain	pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833	tier1	-	-	63	0	0.00	26	23	46.94
NBEA	0	genome.wustl.edu	37	13	36026232	36026232	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	36026232	36026232	C	T	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.6308	p.T2103M	1.000	pfam_DUF1088	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915	tier1	-	-	25	0	0.00	10	15	60.00
NBEAL2	0	genome.wustl.edu	37	3	47041439	47041439	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	47041439	47041439	T	A	SNP	NBEAL2	ENST00000450053	human	ensembl	74_37	+1	known	missense	c.3850	p.W1284R	1.000	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL2	HGNC	ENSG00000160796	tier1	-	-	42	0	0.00	14	14	50.00
NBN	0	genome.wustl.edu	37	8	90965666	90965666	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	90965666	90965666	T	0	DEL	NBN	ENST00000265433	human	ensembl	74_37	-1	known	frame_shift_del	c.1651	p.R551fs	1.000	pirsf_Nibrin_met	pfam_DNA-repair_Nbs1_C,pfam_FHA_dom,superfamily_SMAD_FHA_domain,superfamily_BRCT_dom,smart_FHA_dom,pirsf_Nibrin_met,pfscan_FHA_dom	-	no_errors	NBN	HGNC	ENSG00000104320				72	0	0.00	149	9	5.70
NBPF10	0	genome.wustl.edu	37	1	145367737	145367737	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	145367737	145367737	A	-	DEL	NBPF10	ENST00000342960	human	ensembl	74_37	+1	known	frame_shift_del	c.10333	p.R3447fs	0.003	NULL	pfam_NBPF_dom	-	no_errors	NBPF10	HGNC	ENSG00000163386	tier1			86	0	0.00	116	19	14.07
NBPF14	0	genome.wustl.edu	37	1	148010136	148010136	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	148010136	148010136	T	G	SNP	NBPF14	ENST00000369219	human	ensembl	74_37	-1	known	missense	c.1767	p.E589D	0.007	pfam_NBPF_dom	pfam_NBPF_dom	-	no_errors	NBPF14	HGNC	ENSG00000122497				76	0	0.00	80	5	5.88
NBPF18P	0	genome.wustl.edu	37	1	151991293	151991293	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	151991293	151991293	C	T	SNP	NBPF18P	ENST00000432386	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.056	-	-	-	no_errors	NBPF18P	HGNC	ENSG00000229021	tier1	-	-	109	0	0.00	77	40	34.19
NBPF3	0	genome.wustl.edu	37	1	21809667	21809667	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	21809667	21809667	C	G	SNP	NBPF3	ENST00000318249	human	ensembl	74_37	+1	known	missense	c.1690	p.P564A	0.000	pfam_NBPF_dom	pfam_NBPF_dom	-	no_errors	NBPF3	HGNC	ENSG00000142794	tier1	rs139757131	-	63	0	0.00	55	17	23.61
NCAM2	0	genome.wustl.edu	37	21	22881230	22881230	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	22881230	22881230	G	A	SNP	NCAM2	ENST00000400546	human	ensembl	74_37	+1	known	silent	c.2136	p.L712	0.176	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom,prints_Neural_cell_adh	-	no_errors	NCAM2	HGNC	ENSG00000154654	tier1	-	-	66	0	0.00	45	17	27.42
NCAPD2	0	genome.wustl.edu	37	12	6630171	6630171	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	6630171	6630171	C	T	SNP	NCAPD2	ENST00000315579	human	ensembl	74_37	+1	known	nonsense	c.1609	p.R537*	0.719	superfamily_ARM-type_fold,pirsf_Condensin_cplx_su1	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_Condensin_cplx_su1	-	no_errors	NCAPD2	HGNC	ENSG00000010292	tier1	-	-	42	0	0.00	46	16	25.81
NCAPD3	0	genome.wustl.edu	37	11	134048586	134048586	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	134048586	134048586	G	-	DEL	NCAPD3	ENST00000534548	human	ensembl	74_37	-1	known	frame_shift_del	c.2725	p.Q909fs	1.000	superfamily_ARM-type_fold,pirsf_NCAPD3	superfamily_ARM-type_fold,pirsf_NCAPD3	-	no_errors	NCAPD3	HGNC	ENSG00000151503	tier1			54	0	0.00	33	32	49.23
NCAPG2	0	genome.wustl.edu	37	7	158483385	158483385	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	158483385	158483385	G	A	SNP	NCAPG2	ENST00000409339	human	ensembl	74_37	-1	known	nonsense	c.412	p.R138*	0.004	superfamily_ARM-type_fold	pfam_Condensin2_G2,superfamily_ARM-type_fold	-	no_errors	NCAPG2	HGNC	ENSG00000146918	tier1	-	-	43	0	0.00	32	17	34.69
NCEH1	0	genome.wustl.edu	37	3	172365826	172365826	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	172365826	172365826	T	-	DEL	NCEH1	ENST00000538775	human	ensembl	74_37	-1	known	frame_shift_del	c.313	p.S105fs	0.989	pirsf_Arylacetamide_deacetylase	pfam_AB_hydrolase_3,pirsf_Arylacetamide_deacetylase	-	no_errors	NCEH1	HGNC	ENSG00000144959	tier1			27	0	0.00	9	6	40.00
NCL	0	genome.wustl.edu	37	2	232326561	232326561	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	232326561	232326561	G	T	SNP	NCL	ENST00000322723	human	ensembl	74_37	-1	known	silent	c.303	p.A101	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom	-	no_errors	NCL	HGNC	ENSG00000115053	tier1	-	-	227	0	0.00	143	12	7.74
NCOA3	0	genome.wustl.edu	37	20	46279857	46279857	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	46279857	46279857	G	A	SNP	NCOA3	ENST00000371998	human	ensembl	74_37	+1	known	silent	c.3783	p.Q1261	0.971	pirsf_Nuclear_rcpt_coactivator	pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_SRC-1,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA3	HGNC	ENSG00000124151				86	0	0.00	60	4	5.88
NCOA6	0	genome.wustl.edu	37	20	33346694	33346694	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	33346694	33346694	G	-	DEL	NCOA6	ENST00000359003	human	ensembl	74_37	-1	known	frame_shift_del	c.557	p.P186fs	0.996	NULL	NULL	-	no_errors	NCOA6	HGNC	ENSG00000198646	tier1			45	0	0.00	30	9	23.08
NCOR2	0	genome.wustl.edu	37	12	124846745	124846745	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	124846745	124846745	G	A	SNP	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	silent	c.3024	p.S1008	0.001	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498	tier1	-	-	34	0	0.00	26	12	31.58
NDFIP1	0	genome.wustl.edu	37	5	141511526	141511527	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	141511526	141511527	AA	-	DEL	NDFIP1	ENST00000509436	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	NDFIP1	HGNC	ENSG00000131507	tier1			9	0	0.00	7	5	41.67
NDFIP2	0	genome.wustl.edu	37	13	80117695	80117695	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	80117695	80117695	G	A	SNP	NDFIP2	ENST00000218652	human	ensembl	74_37	+1	known	missense	c.718	p.A240T	1.000	pfam_NEDD4/BSD2	pfam_NEDD4/BSD2	-	no_errors	NDFIP2	HGNC	ENSG00000102471	tier1	-	-	75	0	0.00	57	68	54.40
NDST1	0	genome.wustl.edu	37	5	149918868	149918868	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	149918868	149918868	G	T	SNP	NDST1	ENST00000261797	human	ensembl	74_37	+1	known	missense	c.1516	p.D506Y	1.000	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST1	HGNC	ENSG00000070614	tier1	-	-	54	0	0.00	33	4	10.81
NDST4	0	genome.wustl.edu	37	4	115767053	115767053	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	115767053	115767053	C	T	SNP	NDST4	ENST00000264363	human	ensembl	74_37	-1	known	missense	c.2041	p.A681T	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST4	HGNC	ENSG00000138653	tier1	-	-	54	0	0.00	43	24	35.82
NDUFA9	0	genome.wustl.edu	37	12	4794302	4794303	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	4794302	4794303	AA	-	DEL	NDUFA9	ENST00000540688	human	ensembl	74_37	+1	putative	frame_shift_del	c.51_52	p.N21fs	0.000:0.000	NULL	NULL	-	no_errors	NDUFA9	HGNC	ENSG00000139180	tier1			10	0	0.00	9	15	62.50
NDUFAF1	0	genome.wustl.edu	37	15	41688939	41688939	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	41688939	41688939	C	A	SNP	NDUFAF1	ENST00000260361	human	ensembl	74_37	-1	known	nonsense	c.319	p.G107*	0.995	NULL	pfam_NADH-UbQ_OxRdtase-assoc_prot30,superfamily_Galactose-bd-like	-	no_errors	NDUFAF1	HGNC	ENSG00000137806	tier1	-	-	37	0	0.00	23	8	25.81
NDUFC2	0	genome.wustl.edu	37	11	77784147	77784147	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	77784147	77784147	A	-	DEL	NDUFC2	ENST00000281031	human	ensembl	74_37	-1	known	frame_shift_del	c.207	p.F69fs	0.809	pfam_NADH-UbQ_OxRdtase_b14.5b_su,pirsf_NADH-UbQ_OxRdtase_b14.5b_su	pfam_NADH-UbQ_OxRdtase_b14.5b_su,pirsf_NADH-UbQ_OxRdtase_b14.5b_su	-	no_errors	NDUFC2	HGNC	ENSG00000151366	tier1			29	0	0.00	32	10	23.81
NDUFV3	0	genome.wustl.edu	37	21	44323366	44323366	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	44323366	44323366	T	C	SNP	NDUFV3	ENST00000354250	human	ensembl	74_37	+1	known	missense	c.244	p.S82P	0.005	NULL	NULL	-	no_errors	NDUFV3	HGNC	ENSG00000160194	tier1	-	-	83	0	0.00	62	14	18.42
NEB	0	genome.wustl.edu	37	2	152350344	152350344	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	152350344	152350344	G	T	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.24617	p.T8206K	0.907	smart_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091	tier1	-	-	42	0	0.00	41	4	8.89
NEB	0	genome.wustl.edu	37	2	152420128	152420128	+	Silent	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	152420128	152420128	T	G	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	silent	c.18685	p.R6229	1.000	smart_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091	tier1	-	-	76	0	0.00	43	13	23.21
NEB	0	genome.wustl.edu	37	2	152424871	152424871	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	152424871	152424871	G	-	DEL	NEB	ENST00000397345	human	ensembl	74_37	-1	known	frame_shift_del	c.17695	p.L5899fs	0.000	smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091	tier1			77	0	0.00	64	34	34.69
NEFL	0	genome.wustl.edu	37	8	24813280	24813280	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	24813280	24813280	G	T	SNP	NEFL	ENST00000221169	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NEFL	HGNC	ENSG00000104725	tier1	-	-	33	0	0.00	35	13	27.08
NEK10	0	genome.wustl.edu	37	3	27352478	27352478	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	27352478	27352478	C	A	SNP	NEK10	ENST00000341435	human	ensembl	74_37	-1	known	missense	c.598	p.D200Y	1.000	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Aminoglycoside_PTrfase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NEK10	HGNC	ENSG00000163491	tier1	-	-	16	0	0.00	13	11	45.83
NEK2	0	genome.wustl.edu	37	1	211847831	211847831	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	211847831	211847831	A	G	SNP	NEK2	ENST00000366999	human	ensembl	74_37	-1	novel	missense	c.121	p.Y41H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NEK2	HGNC	ENSG00000117650	tier1	-	-	28	0	0.00	52	12	18.46
NELFE	0	genome.wustl.edu	37	6	31926206	31926206	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	31926206	31926206	G	-	DEL	NELFE	ENST00000375429	human	ensembl	74_37	-1	known	frame_shift_del	c.18	p.G7fs	0.996	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	NELFE	HGNC	ENSG00000204356	tier1			89	0	0.00	43	30	41.10
NET1	0	genome.wustl.edu	37	10	5495005	5495005	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	5495005	5495005	T	-	DEL	NET1	ENST00000465087	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NET1	HGNC	ENSG00000173848	tier1			8	0	0.00	2	5	71.43
NETO1	0	genome.wustl.edu	37	18	70532046	70532046	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	70532046	70532046	C	T	SNP	NETO1	ENST00000327305	human	ensembl	74_37	-1	known	missense	c.217	p.E73K	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt	-	no_errors	NETO1	HGNC	ENSG00000166342	tier1	-	-	100	0	0.00	51	32	38.55
NEUROG2	0	genome.wustl.edu	37	4	113435994	113435994	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	113435994	113435994	G	A	SNP	NEUROG2	ENST00000313341	human	ensembl	74_37	-1	known	missense	c.638	p.T213M	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	NEUROG2	HGNC	ENSG00000178403	tier1	-	-	43	0	0.00	20	22	52.38
NEUROG3	0	genome.wustl.edu	37	10	71332332	71332332	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	71332332	71332332	G	A	SNP	NEUROG3	ENST00000242462	human	ensembl	74_37	-1	known	silent	c.468	p.C156	0.049	superfamily_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	NEUROG3	HGNC	ENSG00000122859	tier1	-	-	31	0	0.00	18	16	47.06
NF1	0	genome.wustl.edu	37	17	29546092	29546092	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	29546092	29546092	G	A	SNP	NF1	ENST00000358273	human	ensembl	74_37	+1	known	missense	c.1597	p.V533I	1.000	superfamily_ARM-type_fold	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_ARM-type_fold,superfamily_CRAL-TRIO_dom,smart_RasGAP,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_RasGAP	-	no_errors	NF1	HGNC	ENSG00000196712	tier1	-	-	34	0	0.00	30	22	42.31
NFKB1	0	genome.wustl.edu	37	4	103533682	103533682	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	103533682	103533682	G	A	SNP	NFKB1	ENST00000226574	human	ensembl	74_37	+1	known	silent	c.2511	p.A837	1.000	pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain	pfam_RHD,pfam_Ankyrin_rpt,pfam_Death_domain,superfamily_p53-like_TF_DNA-bd,superfamily_Ankyrin_rpt-contain_dom,superfamily_Ig_E-set,superfamily_DEATH-like_dom,smart_IPT,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_RHD,prints_NF_Rel_Dor,prints_Ankyrin_rpt	-	no_errors	NFKB1	HGNC	ENSG00000109320	tier1	-	-	52	0	0.00	46	27	36.99
NFKBIB	0	genome.wustl.edu	37	19	39398218	39398218	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	39398218	39398218	C	T	SNP	NFKBIB	ENST00000313582	human	ensembl	74_37	+1	known	silent	c.888	p.H296	0.453	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	NFKBIB	HGNC	ENSG00000104825	tier1	-	-	41	0	0.00	14	15	51.72
NHSL1	0	genome.wustl.edu	37	6	138754349	138754349	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	138754349	138754349	G	T	SNP	NHSL1	ENST00000427025	human	ensembl	74_37	-1	known	missense	c.1145	p.T382K	0.000	NULL	NULL	-	no_errors	NHSL1	HGNC	ENSG00000135540	tier1	-	-	77	0	0.00	65	5	7.14
NHSL2	0	genome.wustl.edu	37	X	71354500	71354500	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	71354500	71354500	C	T	SNP	NHSL2	ENST00000540800	human	ensembl	74_37	+1	known	missense	c.706	p.R236W	0.999	NULL	NULL	-	no_errors	NHSL2	HGNC	ENSG00000204131	tier1	-	-	26	0	0.00	3	9	75.00
NINJ2	0	genome.wustl.edu	37	12	675233	675233	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	675233	675233	G	A	SNP	NINJ2	ENST00000305108	human	ensembl	74_37	-1	known	missense	c.283	p.R95W	1.000	pfam_Ninjurin	pfam_Ninjurin	-	no_errors	NINJ2	HGNC	ENSG00000171840	tier1	-	-	57	0	0.00	85	15	15.00
NINJ2	0	genome.wustl.edu	37	12	772503	772503	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	772503	772503	G	A	SNP	NINJ2	ENST00000305108	human	ensembl	74_37	-1	known	silent	c.162	p.I54	0.000	NULL	pfam_Ninjurin	-	no_errors	NINJ2	HGNC	ENSG00000171840	tier1	-	-	51	0	0.00	68	20	22.73
NISCH	0	genome.wustl.edu	37	3	52507760	52507760	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	52507760	52507760	G	A	SNP	NISCH	ENST00000345716	human	ensembl	74_37	+1	known	missense	c.680	p.C227Y	1.000	NULL	pfam_Phox,pfam_Leu-rich_rpt,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	NISCH	HGNC	ENSG00000010322	tier1	-	-	124	0	0.00	72	41	36.28
NIT1	0	genome.wustl.edu	37	1	161090515	161090515	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	161090515	161090515	G	T	SNP	NIT1	ENST00000368009	human	ensembl	74_37	+1	known	missense	c.944	p.R315M	1.000	pfscan_C-N_Hydrolase	pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pfscan_C-N_Hydrolase	-	no_errors	NIT1	HGNC	ENSG00000158793	tier1	-	-	30	0	0.00	43	4	8.51
NIT1	0	genome.wustl.edu	37	1	161090539	161090539	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	161090539	161090539	G	T	SNP	NIT1	ENST00000368009	human	ensembl	74_37	+1	known	missense	c.968	p.G323V	1.000	NULL	pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pfscan_C-N_Hydrolase	-	no_errors	NIT1	HGNC	ENSG00000158793	tier1	-	-	25	0	0.00	24	5	17.24
NKD1	0	genome.wustl.edu	37	16	50659407	50659407	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	50659407	50659407	C	T	SNP	NKD1	ENST00000268459	human	ensembl	74_37	+1	known	silent	c.378	p.C126	1.000	NULL	pfscan_EF_hand_dom	-	no_errors	NKD1	HGNC	ENSG00000140807	tier1	-	-	33	0	0.00	20	10	33.33
NKD2	0	genome.wustl.edu	37	5	1038447	1038447	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	1038447	1038447	C	G	SNP	NKD2	ENST00000296849	human	ensembl	74_37	+1	known	missense	c.1315	p.H439D	1.000	NULL	pfscan_EF_hand_dom	-	no_errors	NKD2	HGNC	ENSG00000145506				80	0	0.00	88	8	7.02
NKD2	0	genome.wustl.edu	37	5	1038449	1038449	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	1038449	1038449	C	G	SNP	NKD2	ENST00000296849	human	ensembl	74_37	+1	known	missense	c.1317	p.H439Q	1.000	NULL	pfscan_EF_hand_dom	-	no_errors	NKD2	HGNC	ENSG00000145506				79	0	0.00	88	9	9.28
NKRF	0	genome.wustl.edu	37	X	118722358	118722359	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	118722358	118722359	TT	-	DEL	NKRF	ENST00000487600	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.949:0.947	-	-	-	no_errors	NKRF	HGNC	ENSG00000186416	tier1			16	0	0.00	14	13	48.15
NKTR	0	genome.wustl.edu	37	3	42659102	42659102	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	42659102	42659102	A	-	DEL	NKTR	ENST00000232978	human	ensembl	74_37	+1	known	frame_shift_del	c.99	p.T35fs	1.000	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	NKTR	HGNC	ENSG00000114857	tier1			62	0	0.00	48	22	31.43
NKX2-8	0	genome.wustl.edu	37	14	37050375	37050375	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	37050375	37050375	G	T	SNP	NKX2-8	ENST00000258829	human	ensembl	74_37	-1	known	missense	c.452	p.P151H	0.005	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-8	HGNC	ENSG00000136327	tier1	-	-	33	0	0.00	8	12	60.00
NLGN4Y	0	genome.wustl.edu	37	Y	16953112	16953113	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	Y	16953112	16953113	-	C	INS	NLGN4Y	ENST00000382868	human	ensembl	74_37	+1	known	frame_shift_ins	c.2592_2593	p.H865fs	0.997:1.000	NULL	pfam_CarbesteraseB,prints_Neuroligin	-	no_errors	NLGN4Y	HGNC	ENSG00000165246	tier1			59	0	0.00	10	40	80.00
NLGN4Y	0	genome.wustl.edu	37	Y	16952604	16952604	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	Y	16952604	16952604	G	A	SNP	NLGN4Y	ENST00000382868	human	ensembl	74_37	+1	known	missense	c.2084	p.R695H	1.000	NULL	pfam_CarbesteraseB,prints_Neuroligin	-	no_errors	NLGN4Y	HGNC	ENSG00000165246				126	0	0.00	123	14	10.22
NLN	0	genome.wustl.edu	37	5	65088303	65088303	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	65088303	65088303	G	A	SNP	NLN	ENST00000380985	human	ensembl	74_37	+1	known	missense	c.1348	p.A450T	1.000	pfam_Pept_M3A_M3B	pfam_Pept_M3A_M3B	-	no_errors	NLN	HGNC	ENSG00000123213	tier1	-	-	30	0	0.00	26	15	36.59
NLRP12	0	genome.wustl.edu	37	19	54313244	54313244	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	54313244	54313244	C	T	SNP	NLRP12	ENST00000324134	human	ensembl	74_37	-1	known	missense	c.1669	p.A557T	0.996	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP12	HGNC	ENSG00000142405	tier1	-	-	25	0	0.00	17	13	43.33
NLRP13	0	genome.wustl.edu	37	19	56413508	56413508	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	56413508	56413508	G	T	SNP	NLRP13	ENST00000342929	human	ensembl	74_37	-1	known	missense	c.2682	p.N894K	0.011	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP13	HGNC	ENSG00000173572				39	0	0.00	36	4	10.00
NLRP3	0	genome.wustl.edu	37	1	247607260	247607260	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	247607260	247607260	C	A	SNP	NLRP3	ENST00000532083	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NLRP3	HGNC	ENSG00000162711	tier1	-	-	189	0	0.00	209	78	27.18
NLRP7	0	genome.wustl.edu	37	19	55450978	55450978	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	55450978	55450978	C	T	SNP	NLRP7	ENST00000446217	human	ensembl	74_37	-1	known	silent	c.1293	p.P431	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP7	HGNC	ENSG00000167634	tier1	-	-	22	0	0.00	16	7	30.43
NLRP9	0	genome.wustl.edu	37	19	56244870	56244870	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	56244870	56244870	G	T	SNP	NLRP9	ENST00000332836	human	ensembl	74_37	-1	known	silent	c.327	p.L109	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP9	HGNC	ENSG00000185792	tier1	-	-	43	0	0.00	35	4	10.26
NME5	0	genome.wustl.edu	37	5	137451362	137451362	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	137451362	137451362	T	-	DEL	NME5	ENST00000514481	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	NME5	HGNC	ENSG00000112981	tier1			60	0	0.00	56	36	39.13
NMT2	0	genome.wustl.edu	37	10	15175068	15175068	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	15175068	15175068	G	T	SNP	NMT2	ENST00000378165	human	ensembl	74_37	-1	known	missense	c.586	p.P196T	1.000	pfam_MyristoylCoA_TrFase_N,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	pfam_MyristoylCoA_TrFase_C,pfam_MyristoylCoA_TrFase_N,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	-	no_errors	NMT2	HGNC	ENSG00000152465	tier1	-	-	97	0	0.00	57	4	6.56
NMT2	0	genome.wustl.edu	37	10	15175251	15175251	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	15175251	15175251	G	A	SNP	NMT2	ENST00000378165	human	ensembl	74_37	-1	known	missense	c.503	p.A168V	0.976	pfam_MyristoylCoA_TrFase_N,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	pfam_MyristoylCoA_TrFase_C,pfam_MyristoylCoA_TrFase_N,superfamily_Acyl_CoA_acyltransferase,pirsf_MyristoylCoA_TrFase	-	no_errors	NMT2	HGNC	ENSG00000152465	tier1	-	-	110	0	0.00	50	27	35.06
NOBOX	0	genome.wustl.edu	37	7	144101720	144101720	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	144101720	144101720	C	T	SNP	NOBOX	ENST00000467773	human	ensembl	74_37	-1	known	missense	c.139	p.G47R	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	NOBOX	HGNC	ENSG00000106410	tier1	-	-	105	0	0.00	60	43	41.75
NOL10	0	genome.wustl.edu	37	2	10815951	10815951	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	10815951	10815951	G	T	SNP	NOL10	ENST00000381685	human	ensembl	74_37	-1	known	silent	c.258	p.S86	0.997	superfamily_WD40_repeat_dom	pfam_NUC153,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	NOL10	HGNC	ENSG00000115761	tier1	-	-	25	0	0.00	15	9	37.50
NOL8	0	genome.wustl.edu	37	9	95072527	95072527	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	95072527	95072527	G	A	SNP	NOL8	ENST00000442668	human	ensembl	74_37	-1	known	missense	c.2612	p.S871L	0.983	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	NOL8	HGNC	ENSG00000198000	tier1	-	-	38	0	0.00	20	10	33.33
NONO	0	genome.wustl.edu	37	X	70510542	70510544	+	In_Frame_Del	DEL	CAT	CAT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CAT	CAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	70510542	70510544	CAT	-	DEL	NONO	ENST00000276079	human	ensembl	74_37	+1	known	in_frame_del	c.55_57	p.H20in_frame_del	1.000:1.000:1.000	NULL	pfam_RRM_dom,pfam_NOPS,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	NONO	HGNC	ENSG00000147140	tier1			51	0	0.00	9	28	75.68
NOP14	0	genome.wustl.edu	37	4	2939958	2939958	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	2939958	2939958	A	-	DEL	NOP14	ENST00000398071	human	ensembl	74_37	-1	known	frame_shift_del	c.2403	p.F801fs	0.010	NULL	pfam_Nop14	-	no_errors	NOP14	HGNC	ENSG00000087269	tier1			16	0	0.00	21	12	36.36
NOP14	0	genome.wustl.edu	37	4	2950090	2950090	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	2950090	2950090	G	A	SNP	NOP14	ENST00000416614	human	ensembl	74_37	-1	known	missense	c.1328	p.S443L	0.260	pfam_Nop14	pfam_Nop14	-	no_errors	NOP14	HGNC	ENSG00000087269	tier1	rs148438590	-	71	0	0.00	35	26	42.62
NOP14-AS1	0	genome.wustl.edu	37	4	2952780	2952780	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	2952780	2952780	A	-	DEL	NOP14-AS1	ENST00000515194	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NOP14-AS1	HGNC	ENSG00000249673	tier1			21	0	0.00	8	6	42.86
NOTCH4	0	genome.wustl.edu	37	6	32164716	32164716	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	32164716	32164716	G	A	SNP	NOTCH4	ENST00000375023	human	ensembl	74_37	-1	known	missense	c.5186	p.A1729V	1.000	pirsf_Notch,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pirsf_Notch,pfam_EG-like_dom,pfam_Ankyrin_rpt,pfam_EGF-like_Ca-bd_dom,pfam_Notch_dom,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_4,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH4	HGNC	ENSG00000204301	tier1	-	-	65	0	0.00	32	20	37.04
NOTCH4	0	genome.wustl.edu	37	6	32181998	32181998	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	32181998	32181998	G	T	SNP	NOTCH4	ENST00000375023	human	ensembl	74_37	-1	known	missense	c.2056	p.P686T	0.817	pirsf_Notch,smart_EG-like_dom	pirsf_Notch,pfam_EG-like_dom,pfam_Ankyrin_rpt,pfam_EGF-like_Ca-bd_dom,pfam_Notch_dom,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_4,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH4	HGNC	ENSG00000204301	tier1	-	-	14	0	0.00	4	6	60.00
NOTCH4	0	genome.wustl.edu	37	6	32191658	32191659	+	In_Frame_Ins	INS	-	-	AGC			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	32191658	32191659	-	AGC	INS	NOTCH4	ENST00000375023	human	ensembl	74_37	-1	known	in_frame_ins	c.48_47	p.17in_frame_insL	0.002:0.003	pirsf_Notch	pirsf_Notch,pfam_EG-like_dom,pfam_Ankyrin_rpt,pfam_EGF-like_Ca-bd_dom,pfam_Notch_dom,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_4,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH4	HGNC	ENSG00000204301	tier1			31	0	0.00	25	13	34.21
NOTO	0	genome.wustl.edu	37	2	73435720	73435720	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	73435720	73435720	G	A	SNP	NOTO	ENST00000398468	human	ensembl	74_37	+1	known	missense	c.575	p.R192Q	0.001	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	NOTO	HGNC	ENSG00000214513	tier1	-	-	30	0	0.00	17	9	34.62
NPAP1	0	genome.wustl.edu	37	15	24921798	24921798	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	24921798	24921798	C	-	DEL	NPAP1	ENST00000329468	human	ensembl	74_37	+1	known	frame_shift_del	c.784	p.P263fs	0.001	NULL	NULL	-	no_errors	NPAP1	HGNC	ENSG00000185823	tier1			18	0	0.00	21	12	36.36
NPAT	0	genome.wustl.edu	37	11	108044069	108044069	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	108044069	108044069	T	-	DEL	NPAT	ENST00000278612	human	ensembl	74_37	-1	known	frame_shift_del	c.1642	p.S548fs	0.000	NULL	smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	NPAT	HGNC	ENSG00000149308	tier1			34	0	0.00	32	10	23.81
NPAT	0	genome.wustl.edu	37	11	108093362	108093362	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	108093362	108093362	C	T	SNP	NPAT	ENST00000610253	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	NPAT	HGNC	ENSG00000149308	tier1	-	-	68	0	0.00	37	21	36.21
NPBWR1	0	genome.wustl.edu	37	8	53852639	53852639	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	53852639	53852639	G	A	SNP	NPBWR1	ENST00000331251	human	ensembl	74_37	+1	known	missense	c.172	p.V58M	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Neuropept_B/W_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_Opioid_rcpt	-	no_errors	NPBWR1	HGNC	ENSG00000183729	tier1	-	-	84	0	0.00	65	32	32.99
NPEPL1	0	genome.wustl.edu	37	20	57268948	57268948	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	57268948	57268948	C	T	SNP	NPEPL1	ENST00000356091	human	ensembl	74_37	+1	known	silent	c.306	p.C102	1.000	NULL	pfam_Peptidase_M17_C,prints_Leucine_aapep/pepB	-	no_errors	NPEPL1	HGNC	ENSG00000215440	tier1	-	-	23	0	0.00	11	10	47.62
NPEPL1	0	genome.wustl.edu	37	20	57289000	57289000	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	57289000	57289000	G	A	SNP	NPEPL1	ENST00000356091	human	ensembl	74_37	+1	known	missense	c.1153	p.A385T	0.994	pfam_Peptidase_M17_C	pfam_Peptidase_M17_C,prints_Leucine_aapep/pepB	-	no_errors	NPEPL1	HGNC	ENSG00000215440	tier1	-	-	66	0	0.00	37	31	45.59
NPHP1	0	genome.wustl.edu	37	2	110881594	110881594	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	110881594	110881594	T	C	SNP	NPHP1	ENST00000316534	human	ensembl	74_37	-1	known	missense	c.1976	p.D659G	0.911	NULL	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	NPHP1	HGNC	ENSG00000144061	tier1	-	-	77	0	0.00	72	12	14.29
NPHP4	0	genome.wustl.edu	37	1	5925296	5925296	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	5925296	5925296	C	T	SNP	NPHP4	ENST00000378156	human	ensembl	74_37	-1	known	missense	c.3682	p.V1228I	0.987	NULL	NULL	-	no_errors	NPHP4	HGNC	ENSG00000131697	tier1	-	-	94	0	0.00	63	34	35.05
NPIPB11	0	genome.wustl.edu	37	16	29395119	29395119	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	29395119	29395119	C	A	SNP	NPIPB11	ENST00000524087	human	ensembl	74_37	-1	putative	silent	c.1134	p.R378	0.000	NULL	NULL	-	no_errors	NPIPB11	HGNC	ENSG00000254206	tier1	-	-	51	0	0.00	48	4	7.69
NPR2	0	genome.wustl.edu	37	9	35792472	35792472	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	35792472	35792472	C	T	SNP	NPR2	ENST00000342694	human	ensembl	74_37	+1	known	missense	c.67	p.R23W	0.991	superfamily_Peripla_BP_I	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Peripla_BP_I,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_A/G_cyclase,prints_Ntpep_rcpt,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	NPR2	HGNC	ENSG00000159899	tier1	-	-	133	0	0.00	69	43	38.39
NPR3	0	genome.wustl.edu	37	5	32712514	32712514	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	32712514	32712514	G	A	SNP	NPR3	ENST00000265074	human	ensembl	74_37	+1	known	missense	c.632	p.R211Q	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_Ntpep_rcpt	-	no_errors	NPR3	HGNC	ENSG00000113389	tier1	-	-	56	0	0.00	43	12	21.82
NPRL3	0	genome.wustl.edu	37	16	162652	162652	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	162652	162652	C	T	SNP	NPRL3	ENST00000399953	human	ensembl	74_37	-1	known	silent	c.516	p.A172	0.194	pfam_NPR3	pfam_NPR3,superfamily_Galactose-bd-like	-	no_errors	NPRL3	HGNC	ENSG00000103148	tier1	-	-	32	0	0.00	14	8	36.36
NPY	0	genome.wustl.edu	37	7	24324976	24324976	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	24324976	24324976	C	T	SNP	NPY	ENST00000242152	human	ensembl	74_37	+1	known	silent	c.117	p.D39	1.000	pfam_Pancreatic_hormone-like,smart_Pancreatic_hormone-like,pfscan_Pancreatic_hormone-like,prints_Pancreatic_hormone-like	pfam_Pancreatic_hormone-like,smart_Pancreatic_hormone-like,pfscan_Pancreatic_hormone-like,prints_Pancreatic_hormone-like	-	no_errors	NPY	HGNC	ENSG00000122585	tier1	-	-	37	0	0.00	19	19	50.00
NPY2R	0	genome.wustl.edu	37	4	156135406	156135406	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	156135406	156135406	G	A	SNP	NPY2R	ENST00000329476	human	ensembl	74_37	+1	known	silent	c.315	p.P105	0.846	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPFF_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_NPY2_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NPFF_rcpt	-	no_errors	NPY2R	HGNC	ENSG00000185149	tier1	-	-	57	0	0.00	29	22	43.14
NQO1	0	genome.wustl.edu	37	16	69752048	69752048	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	69752048	69752048	G	A	SNP	NQO1	ENST00000320623	human	ensembl	74_37	-1	known	missense	c.281	p.A94V	0.871	pfam_Flavodoxin_fold,pfam_FMN_Rdtase-like	pfam_Flavodoxin_fold,pfam_FMN_Rdtase-like	-	no_errors	NQO1	HGNC	ENSG00000181019	tier1	-	-	43	0	0.00	7	18	72.00
NR2C2AP	0	genome.wustl.edu	37	19	19312794	19312794	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	19312794	19312794	G	T	SNP	NR2C2AP	ENST00000331552	human	ensembl	74_37	-1	known	silent	c.360	p.A120	0.692	superfamily_Galactose-bd-like	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like	-	no_errors	NR2C2AP	HGNC	ENSG00000184162	tier1	-	-	56	0	0.00	33	4	10.81
NR4A2	0	genome.wustl.edu	37	2	157182418	157182418	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	157182418	157182418	C	-	DEL	NR4A2	ENST00000539077	human	ensembl	74_37	-1	known	frame_shift_del	c.1668	p.L557fs	0.001	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_NURR_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NURR_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A2	HGNC	ENSG00000153234	tier1			18	0	0.00	16	6	27.27
NR4A2	0	genome.wustl.edu	37	2	157185943	157185943	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	157185943	157185943	C	T	SNP	NR4A2	ENST00000539077	human	ensembl	74_37	-1	known	silent	c.789	p.P263	1.000	prints_Retinoic_acid_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_NURR_rcpt,prints_Nuc_orph_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt	-	no_errors	NR4A2	HGNC	ENSG00000153234	tier1	-	-	82	0	0.00	29	25	46.30
NRAS	0	genome.wustl.edu	37	1	115252224	115252224	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	115252224	115252224	A	G	SNP	NRAS	ENST00000369535	human	ensembl	74_37	-1	known	missense	c.416	p.I139T	1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	NRAS	HGNC	ENSG00000213281	tier1	-	-	137	0	0.00	152	10	6.13
NRCAM	0	genome.wustl.edu	37	7	107790216	107790216	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	107790216	107790216	G	A	SNP	NRCAM	ENST00000522550	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.586	-	-	-	no_errors	NRCAM	HGNC	ENSG00000091129	tier1	-	-	14	0	0.00	8	7	46.67
NRD1	0	genome.wustl.edu	37	1	52257299	52257299	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	52257299	52257299	C	T	SNP	NRD1	ENST00000354831	human	ensembl	74_37	-1	known	missense	c.3115	p.G1039R	1.000	pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	NRD1	HGNC	ENSG00000078618	tier1	-	-	67	0	0.00	39	27	40.91
NRD1	0	genome.wustl.edu	37	1	52290994	52290994	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	52290994	52290994	G	T	SNP	NRD1	ENST00000354831	human	ensembl	74_37	-1	known	missense	c.1205	p.A402D	1.000	pfam_Pept_M16_N,superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	NRD1	HGNC	ENSG00000078618	tier1	-	-	72	0	0.00	67	4	5.63
NRXN2	0	genome.wustl.edu	37	11	64453270	64453270	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	64453270	64453270	C	T	SNP	NRXN2	ENST00000265459	human	ensembl	74_37	-1	known	missense	c.1000	p.A334T	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN2	HGNC	ENSG00000110076	tier1	-	-	97	0	0.00	57	37	39.36
NSD1	0	genome.wustl.edu	37	5	176721015	176721015	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	176721015	176721015	G	-	DEL	NSD1	ENST00000439151	human	ensembl	74_37	+1	known	frame_shift_del	c.6646	p.E2217fs	1.000	NULL	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	NSD1	HGNC	ENSG00000165671	tier1			70	0	0.00	33	20	37.74
NSD1	0	genome.wustl.edu	37	5	176721680	176721680	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	176721680	176721680	A	G	SNP	NSD1	ENST00000439151	human	ensembl	74_37	+1	known	silent	c.7311	p.K2437	0.996	NULL	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	NSD1	HGNC	ENSG00000165671	tier1	-	-	18	0	0.00	22	10	30.30
NSMAF	0	genome.wustl.edu	37	8	59511868	59511868	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	59511868	59511868	G	T	SNP	NSMAF	ENST00000427130	human	ensembl	74_37	-1	known	missense	c.1601	p.S534Y	1.000	pfam_BEACH_dom,superfamily_BEACH_dom,pfscan_BEACH_dom	pfam_BEACH_dom,pfam_WD40_repeat,pfam_GRAM,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,smart_GRAM,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NSMAF	HGNC	ENSG00000035681	tier1	-	-	47	0	0.00	60	5	7.69
NTAN1	0	genome.wustl.edu	37	16	15131990	15131990	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	15131990	15131990	T	-	DEL	NTAN1	ENST00000287706	human	ensembl	74_37	-1	known	frame_shift_del	c.831	p.K277fs	0.819	NULL	NULL	-	no_errors	NTAN1	HGNC	ENSG00000157045	tier1			96	0	0.00	67	31	31.63
NTM	0	genome.wustl.edu	37	11	131240692	131240692	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	131240692	131240692	A	-	DEL	NTM	ENST00000477098	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.619	-	-	-	no_errors	NTM	HGNC	ENSG00000182667	tier1			37	0	0.00	18	18	50.00
NTM	0	genome.wustl.edu	37	11	131530880	131530880	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	131530880	131530880	A	-	DEL	NTM	ENST00000477098	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.999	-	-	-	no_errors	NTM	HGNC	ENSG00000182667	tier1			18	0	0.00	30	5	14.29
NTM	0	genome.wustl.edu	37	11	132205624	132205626	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	132205624	132205626	TTT	-	DEL	NTM	ENST00000474900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.011:0.009	-	-	-	no_errors	NTM	HGNC	ENSG00000182667	tier1			30	0	0.00	18	7	28.00
NTM	0	genome.wustl.edu	37	11	132206462	132206462	+	RNA	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	132206462	132206462	A	T	SNP	NTM	ENST00000474900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	NTM	HGNC	ENSG00000182667	tier1	-	-	41	0	0.00	32	13	28.89
NTN3	0	genome.wustl.edu	37	16	2522299	2522299	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	2522299	2522299	C	-	DEL	NTN3	ENST00000293973	human	ensembl	74_37	+1	known	frame_shift_del	c.597	p.P201fs	1.000	pfam_Laminin_N,smart_Laminin_N,pfscan_Laminin_N	pfam_EGF_laminin,pfam_Laminin_N,pfam_Netrin_module_non-TIMP,superfamily_TIMP-like_OB-fold,smart_Laminin_N,smart_EGF_laminin,smart_Netrin_module_non-TIMP,pfscan_EGF_laminin,pfscan_Laminin_N,pfscan_Netrin_domain	-	no_errors	NTN3	HGNC	ENSG00000162068	tier1			53	0	0.00	31	13	29.55
NTRK3	0	genome.wustl.edu	37	15	88576214	88576214	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	88576214	88576214	C	T	SNP	NTRK3	ENST00000360948	human	ensembl	74_37	-1	known	missense	c.1459	p.G487S	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_LRR-contain_N,superfamily_Kinase-like_dom,smart_LRR-contain_N,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Tyr_kinase_NGF_rcpt,prints_Tyr_kin_neurotrophic_rcpt_3,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NTRK3	HGNC	ENSG00000140538	tier1	-	-	65	0	0.00	35	16	31.37
NUAK1	0	genome.wustl.edu	37	12	106460763	106460763	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	106460763	106460763	G	A	SNP	NUAK1	ENST00000261402	human	ensembl	74_37	-1	known	silent	c.1803	p.C601	0.973	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NUAK1	HGNC	ENSG00000074590	tier1	rs149780357	-	36	0	0.00	31	20	39.22
NUAK2	0	genome.wustl.edu	37	1	205273406	205273406	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	205273406	205273406	G	T	SNP	NUAK2	ENST00000367157	human	ensembl	74_37	-1	known	missense	c.1059	p.F353L	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NUAK2	HGNC	ENSG00000163545	tier1	-	-	37	0	0.00	24	5	17.24
NUB1	0	genome.wustl.edu	37	7	151046320	151046320	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	151046320	151046320	A	-	DEL	NUB1	ENST00000568733	human	ensembl	74_37	+1	known	frame_shift_del	c.351	p.D120fs	0.301	NULL	pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	NUB1	HGNC	ENSG00000013374	tier1			49	0	0.00	24	13	35.14
NUBPL	0	genome.wustl.edu	37	14	32031398	32031398	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	32031398	32031398	G	T	SNP	NUBPL	ENST00000281081	human	ensembl	74_37	+1	known	missense	c.233	p.G78V	1.000	pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,pfam_ATPase_MipZ/NubP2/Cfd1,superfamily_P-loop_NTPase	pfam_ATPase-like_ParA/MinD,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,pfam_ATPase_MipZ/NubP2/Cfd1,superfamily_P-loop_NTPase	-	no_errors	NUBPL	HGNC	ENSG00000151413				24	0	0.00	26	4	13.33
NUDC	0	genome.wustl.edu	37	1	27272047	27272047	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	27272047	27272047	G	A	SNP	NUDC	ENST00000484772	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NUDC	HGNC	ENSG00000090273	tier1	-	-	59	0	0.00	41	15	26.79
NUMA1	0	genome.wustl.edu	37	11	71730662	71730662	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	71730662	71730662	A	G	SNP	NUMA1	ENST00000393695	human	ensembl	74_37	-1	known	silent	c.462	p.A154	1.000	NULL	superfamily_Prefoldin	-	no_errors	NUMA1	HGNC	ENSG00000137497	tier1	-	-	55	0	0.00	29	17	36.96
NUP107	0	genome.wustl.edu	37	12	69126366	69126366	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	69126366	69126366	A	-	DEL	NUP107	ENST00000401003	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NUP107	HGNC	ENSG00000111581	tier1			36	0	0.00	16	23	58.97
NUP133	0	genome.wustl.edu	37	1	229586482	229586483	+	RNA	INS	-	-	TT			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	229586482	229586483	-	TT	INS	NUP133	ENST00000485119	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004:0.002	-	-	-	no_errors	NUP133	HGNC	ENSG00000069248	tier1			11	0	0.00	10	2	16.67
NUP210	0	genome.wustl.edu	37	3	13361314	13361314	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	13361314	13361314	C	T	SNP	NUP210	ENST00000254508	human	ensembl	74_37	-1	known	missense	c.5332	p.A1778T	0.987	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182	tier1	-	-	91	0	0.00	37	33	47.14
NUP210	0	genome.wustl.edu	37	3	13417860	13417860	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	13417860	13417860	G	A	SNP	NUP210	ENST00000254508	human	ensembl	74_37	-1	known	silent	c.1224	p.Y408	0.998	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182	tier1	-	-	125	0	0.00	78	54	40.91
NUP210L	0	genome.wustl.edu	37	1	153965404	153965404	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	153965404	153965404	A	-	DEL	NUP210L	ENST00000368559	human	ensembl	74_37	-1	known	frame_shift_del	c.5574	p.F1858fs	0.000	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,smart_Big_2	-	no_errors	NUP210L	HGNC	ENSG00000143552	tier1			66	0	0.00	67	26	27.96
NUP210L	0	genome.wustl.edu	37	1	153965412	153965412	+	Splice_Site	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	153965412	153965412	C	A	SNP	NUP210L	ENST00000368559	human	ensembl	74_37	-1	known	splice_site	c.5567-1	e40-1	0.930	-	-	-	no_errors	NUP210L	HGNC	ENSG00000143552	tier1	-	-	58	0	0.00	65	30	31.25
NUP214	0	genome.wustl.edu	37	9	134072693	134072693	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	134072693	134072693	G	T	SNP	NUP214	ENST00000451030	human	ensembl	74_37	+1	known	missense	c.3815	p.S1272I	0.019	NULL	smart_WD40_repeat	-	no_errors	NUP214	HGNC	ENSG00000126883				62	0	0.00	59	4	6.25
NUP88	0	genome.wustl.edu	37	17	5294889	5294889	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	5294889	5294889	C	A	SNP	NUP88	ENST00000573584	human	ensembl	74_37	-1	known	missense	c.1476	p.W492C	0.995	pfam_Nucleoporin_Nup88	pfam_Nucleoporin_Nup88	-	no_errors	NUP88	HGNC	ENSG00000108559	tier1	-	-	73	0	0.00	33	23	40.35
NUPL2	0	genome.wustl.edu	37	7	23224773	23224773	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	23224773	23224773	G	-	DEL	NUPL2	ENST00000258742	human	ensembl	74_37	+1	known	frame_shift_del	c.206	p.G71fs	1.000	NULL	smart_Znf_CCCH	-	no_errors	NUPL2	HGNC	ENSG00000136243	tier1			56	0	0.00	25	6	19.35
NYNRIN	0	genome.wustl.edu	37	14	24885036	24885036	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	24885036	24885036	G	A	SNP	NYNRIN	ENST00000382554	human	ensembl	74_37	+1	known	missense	c.4081	p.G1361S	0.996	superfamily_RNaseH-like_dom	pfam_RNase_Zc3h12,superfamily_RNaseH-like_dom,pfscan_Integrase_cat-core	-	no_errors	NYNRIN	HGNC	ENSG00000205978	tier1	-	-	76	0	0.00	42	19	30.65
OAS2	0	genome.wustl.edu	37	12	113442830	113442830	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	113442830	113442830	A	-	DEL	OAS2	ENST00000342315	human	ensembl	74_37	+1	known	frame_shift_del	c.1271	p.N426fs	0.000	pfam_Nucleotidyltransferase,pfscan_2-5-oligoadenylate_synth_N	pfam_2-5-oligoAdlate_synth_1_dom2/C,pfam_Nucleotidyltransferase,pfscan_2-5-oligoadenylate_synth_N	-	no_errors	OAS2	HGNC	ENSG00000111335	tier1			26	0	0.00	26	16	38.10
OAT	0	genome.wustl.edu	37	10	126091634	126091634	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	126091634	126091634	A	-	DEL	OAT	ENST00000471127	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	OAT	HGNC	ENSG00000065154	tier1			50	0	0.00	27	12	30.77
OBSCN	0	genome.wustl.edu	37	1	228402129	228402129	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	228402129	228402129	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.1513	p.V505M	1.000	superfamily_Fibronectin_type3,smart_Ig_sub	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1	-	-	124	0	0.00	95	26	21.49
OBSCN	0	genome.wustl.edu	37	1	228552687	228552687	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	228552687	228552687	C	-	DEL	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	frame_shift_del	c.18847	p.P6284fs	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1			122	0	0.00	101	31	23.48
OBSCN	0	genome.wustl.edu	37	1	228560743	228560743	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	228560743	228560743	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.22264	p.V7422M	0.792	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1	-	-	32	0	0.00	19	9	32.14
OBSL1	0	genome.wustl.edu	37	2	220416864	220416864	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	220416864	220416864	C	T	SNP	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	missense	c.5383	p.A1795T	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006	tier1	-	-	19	0	0.00	9	9	50.00
OBSL1	0	genome.wustl.edu	37	2	220432447	220432447	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	220432447	220432447	T	G	SNP	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	missense	c.1527	p.R509S	0.981	smart_Ig_sub	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006	tier1	-	-	80	0	0.00	34	26	43.33
OCIAD1	0	genome.wustl.edu	37	4	48859372	48859372	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	48859372	48859372	A	-	DEL	OCIAD1	ENST00000264312	human	ensembl	74_37	+1	known	frame_shift_del	c.690	p.E233fs	0.300	NULL	pfam_OCIA	-	no_errors	OCIAD1	HGNC	ENSG00000109180	tier1			75	0	0.00	37	16	30.19
OCIAD2	0	genome.wustl.edu	37	4	48887522	48887522	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	48887522	48887522	G	T	SNP	OCIAD2	ENST00000508632	human	ensembl	74_37	-1	known	missense	c.444	p.D148E	0.000	NULL	pfam_OCIA	-	no_errors	OCIAD2	HGNC	ENSG00000145247	tier1	-	-	48	0	0.00	48	12	20.00
OCLN	0	genome.wustl.edu	37	5	68805316	68805316	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	68805316	68805316	C	T	SNP	OCLN	ENST00000355237	human	ensembl	74_37	+1	known	silent	c.399	p.D133	0.998	pfam_Marvel,pirsf_Occludin	pfam_Occludin_RNApol2_elong_fac_ELL,pfam_Marvel,pirsf_Occludin,prints_Occludin	-	no_errors	OCLN	HGNC	ENSG00000197822	tier1	-	-	100	0	0.00	46	35	43.21
OCSTAMP	0	genome.wustl.edu	37	20	45174347	45174347	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	45174347	45174347	C	T	SNP	OCSTAMP	ENST00000279028	human	ensembl	74_37	-1	known	silent	c.666	p.A222	0.000	NULL	pfam_DC_STAMP-like	-	no_errors	OCSTAMP	HGNC	ENSG00000149635	tier1	-	-	30	0	0.00	10	11	52.38
OGFOD1	0	genome.wustl.edu	37	16	56492432	56492433	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	56492432	56492433	-	T	INS	OGFOD1	ENST00000565682	human	ensembl	74_37	+1	known	frame_shift_ins	c.308_309	p.S106fs	0.001:0.001	NULL	NULL	-	no_errors	OGFOD1	HGNC	ENSG00000087263	tier1			74	0	0.00	55	29	34.52
OGG1	0	genome.wustl.edu	37	3	9799001	9799001	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	9799001	9799001	G	-	DEL	OGG1	ENST00000302003	human	ensembl	74_37	+1	known	frame_shift_del	c.1222	p.G409fs	0.000	NULL	pfam_OGG_N,pfam_HhH-GPD_domain,superfamily_DNA_glycosylase,smart_HhH-GPD_domain,tigrfam_Ogg	-	no_errors	OGG1	HGNC	ENSG00000114026	tier1			12	0	0.00	13	3	18.75
OGN	0	genome.wustl.edu	37	9	95155368	95155368	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	95155368	95155368	G	A	SNP	OGN	ENST00000262551	human	ensembl	74_37	-1	known	missense	c.427	p.P143S	0.999	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	OGN	HGNC	ENSG00000106809	tier1	-	-	82	0	0.00	54	31	36.47
OLFML2B	0	genome.wustl.edu	37	1	161953561	161953561	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	161953561	161953561	G	T	SNP	OLFML2B	ENST00000294794	human	ensembl	74_37	-1	known	silent	c.2157	p.S719	1.000	pfam_Olfac-like,superfamily_NA-bd_OB-fold,smart_Olfac-like,pfscan_Olfac-like	pfam_Olfac-like,superfamily_NA-bd_OB-fold,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFML2B	HGNC	ENSG00000162745	tier1	-	-	130	0	0.00	100	43	30.07
ONECUT1	0	genome.wustl.edu	37	15	53081749	53081749	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	53081749	53081749	C	T	SNP	ONECUT1	ENST00000305901	human	ensembl	74_37	-1	known	silent	c.333	p.P111	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	ONECUT1	HGNC	ENSG00000169856	tier1	-	-	85	0	0.00	34	22	39.29
ONECUT2	0	genome.wustl.edu	37	18	55103827	55103827	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	55103827	55103827	C	T	SNP	ONECUT2	ENST00000491143	human	ensembl	74_37	+1	known	silent	c.879	p.N293	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	ONECUT2	HGNC	ENSG00000119547	tier1	-	-	34	0	0.00	18	8	30.77
OPLAH	0	genome.wustl.edu	37	8	145109541	145109542	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	145109541	145109542	-	G	INS	OPLAH	ENST00000426825	human	ensembl	74_37	-1	known	frame_shift_ins	c.2609_2608	p.H870fs	1.000:1.000	pfam_Hydantoinase_B	pfam_Hydantoinase_B,pfam_Hydantoinase_A,pfam_Hydant_A_N	-	no_errors	OPLAH	HGNC	ENSG00000178814	tier1			56	0	0.00	49	7	12.50
OPN4	0	genome.wustl.edu	37	10	88421075	88421075	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	88421075	88421075	C	T	SNP	OPN4	ENST00000372071	human	ensembl	74_37	+1	known	missense	c.1036	p.P346S	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Opsin	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Opsin	-	no_errors	OPN4	HGNC	ENSG00000122375	tier1	-	-	35	0	0.00	23	4	14.81
OPRK1	0	genome.wustl.edu	37	8	54147421	54147421	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	54147421	54147421	G	A	SNP	OPRK1	ENST00000265572	human	ensembl	74_37	-1	known	missense	c.508	p.R170C	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_Opioid_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_Kappa_opi_rcpt,prints_GPCR_Rhodpsn,prints_Opioid_rcpt,prints_Neuropept_B/W_rcpt,prints_Somatstn_rcpt,prints_NPY_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OPRK1	HGNC	ENSG00000082556	tier1	rs201421010	-	86	0	0.00	60	26	30.23
OPTN	0	genome.wustl.edu	37	10	13151192	13151192	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	13151192	13151192	C	-	DEL	OPTN	ENST00000263036	human	ensembl	74_37	+1	known	frame_shift_del	c.70	p.H26fs	1.000	NULL	pfam_NEMO_N	-	no_errors	OPTN	HGNC	ENSG00000123240	tier1			25	0	0.00	9	5	35.71
OR10A7	0	genome.wustl.edu	37	12	55615174	55615174	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	55615174	55615174	C	T	SNP	OR10A7	ENST00000326258	human	ensembl	74_37	+1	known	silent	c.366	p.R122	0.992	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10A7	HGNC	ENSG00000179919	tier1	-	-	79	0	0.00	79	5	5.95
OR10AG1	0	genome.wustl.edu	37	11	55735743	55735743	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	55735743	55735743	G	T	SNP	OR10AG1	ENST00000312345	human	ensembl	74_37	-1	known	missense	c.197	p.T66K	0.022	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10AG1	HGNC	ENSG00000174970	tier1	-	-	38	0	0.00	24	15	38.46
OR10J1	0	genome.wustl.edu	37	1	159410055	159410055	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	159410055	159410055	G	A	SNP	OR10J1	ENST00000423932	human	ensembl	74_37	+1	known	silent	c.507	p.T169	0.004	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10J1	HGNC	ENSG00000196184	tier1	rs149860482	-	90	0	0.00	70	25	26.32
OR10X1	0	genome.wustl.edu	37	1	158549366	158549366	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	158549366	158549366	A	G	SNP	OR10X1	ENST00000368150	human	ensembl	74_37	-1	known	silent	c.324	p.I108	0.982	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10X1	HGNC	ENSG00000186400	tier1	-	-	82	0	0.00	82	5	5.75
OR2A7	0	genome.wustl.edu	37	7	143956190	143956190	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	143956190	143956190	A	0	DEL	OR2A7	ENST00000493325	human	ensembl	74_37	-1	known	frame_shift_del	c.532	p.C178fs	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,prints_Melcrt_ACTH_rcpt	-	no_errors	OR2A7	HGNC	ENSG00000243896				29	0	0.00	32	3	8.57
OR2L3	0	genome.wustl.edu	37	1	248224623	248224623	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	248224623	248224623	T	G	SNP	OR2L3	ENST00000359959	human	ensembl	74_37	+1	known	missense	c.640	p.S214A	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2L3	HGNC	ENSG00000198128	tier1	-	-	172	0	0.00	190	29	13.24
OR2L3	0	genome.wustl.edu	37	1	248224643	248224643	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	248224643	248224643	T	C	SNP	OR2L3	ENST00000359959	human	ensembl	74_37	+1	known	silent	c.660	p.V220	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2L3	HGNC	ENSG00000198128	tier1	-	-	166	0	0.00	178	39	17.97
OR2T33	0	genome.wustl.edu	37	1	248436945	248436945	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	248436945	248436945	A	G	SNP	OR2T33	ENST00000318021	human	ensembl	74_37	-1	known	missense	c.172	p.Y58H	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T33	HGNC	ENSG00000177212	tier1	-	-	107	0	0.00	107	34	24.11
OR4M1	0	genome.wustl.edu	37	14	20248642	20248642	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	20248642	20248642	A	G	SNP	OR4M1	ENST00000315957	human	ensembl	74_37	+1	known	missense	c.161	p.H54R	0.570	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4M1	HGNC	ENSG00000176299	tier1	-	-	218	0	0.00	149	46	23.59
OR4P4	0	genome.wustl.edu	37	11	55406142	55406142	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	55406142	55406142	T	-	DEL	OR4P4	ENST00000314612	human	ensembl	74_37	+1	known	frame_shift_del	c.309	p.F105fs	0.097	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4P4	HGNC	ENSG00000181927	tier1			38	0	0.00	9	21	70.00
OR51A7	0	genome.wustl.edu	37	11	4928790	4928790	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	4928790	4928790	C	T	SNP	OR51A7	ENST00000359350	human	ensembl	74_37	+1	known	missense	c.191	p.A64V	0.801	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR51A7	HGNC	ENSG00000176895	tier1	-	-	40	0	0.00	17	12	41.38
OR51E2	0	genome.wustl.edu	37	11	4703475	4703475	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	4703475	4703475	A	-	DEL	OR51E2	ENST00000396950	human	ensembl	74_37	-1	known	frame_shift_del	c.467	p.F156fs	0.027	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51E2	HGNC	ENSG00000167332	tier1			36	0	0.00	18	5	21.74
OR51G1	0	genome.wustl.edu	37	11	4944874	4944874	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	4944874	4944874	G	A	SNP	OR51G1	ENST00000321961	human	ensembl	74_37	-1	known	silent	c.696	p.S232	0.566	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51G1	HGNC	ENSG00000176879	tier1	-	-	52	0	0.00	36	23	38.98
OR51G2	0	genome.wustl.edu	37	11	4936759	4936759	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	4936759	4936759	C	T	SNP	OR51G2	ENST00000322013	human	ensembl	74_37	-1	known	silent	c.135	p.P45	0.585	pfam_7TM_GPCR_olfarory/Srsx,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51G2	HGNC	ENSG00000176893	tier1	-	-	32	0	0.00	19	12	38.71
OR52A1	0	genome.wustl.edu	37	11	5173098	5173098	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	5173098	5173098	G	T	SNP	OR52A1	ENST00000328942	human	ensembl	74_37	-1	known	silent	c.502	p.R168	0.001	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52A1	HGNC	ENSG00000182070	tier1	-	-	30	0	0.00	23	3	11.54
OR52N5	0	genome.wustl.edu	37	11	5799652	5799652	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	5799652	5799652	A	-	DEL	OR52N5	ENST00000317093	human	ensembl	74_37	-1	known	frame_shift_del	c.213	p.F71fs	0.971	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	-	no_errors	OR52N5	HGNC	ENSG00000181009	tier1			13	0	0.00	3	13	81.25
OR5AR1	0	genome.wustl.edu	37	11	56431959	56431959	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	56431959	56431959	C	T	SNP	OR5AR1	ENST00000302969	human	ensembl	74_37	+1	known	silent	c.798	p.Y266	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5AR1	HGNC	ENSG00000172459	tier1	-	-	44	0	0.00	32	18	36.00
OR5B12	0	genome.wustl.edu	37	11	58207226	58207226	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	58207226	58207226	G	T	SNP	OR5B12	ENST00000302572	human	ensembl	74_37	-1	known	silent	c.399	p.T133	0.135	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR5B12	HGNC	ENSG00000172362	tier1	-	-	87	0	0.00	81	40	33.06
OR5D14	0	genome.wustl.edu	37	11	55563149	55563149	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	55563149	55563149	A	G	SNP	OR5D14	ENST00000335605	human	ensembl	74_37	+1	known	missense	c.118	p.T40A	0.309	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D14	HGNC	ENSG00000186113	tier1	-	-	154	0	0.00	104	46	30.67
OR6C70	0	genome.wustl.edu	37	12	55863619	55863619	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	55863619	55863619	A	-	DEL	OR6C70	ENST00000327335	human	ensembl	74_37	-1	known	frame_shift_del	c.304	p.Y102fs	0.001	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C70	HGNC	ENSG00000184954	tier1			24	0	0.00	26	17	39.53
OR6C70	0	genome.wustl.edu	37	12	55863764	55863764	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	55863764	55863764	G	T	SNP	OR6C70	ENST00000327335	human	ensembl	74_37	-1	known	silent	c.159	p.L53	0.963	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C70	HGNC	ENSG00000184954	tier1	-	-	26	0	0.00	41	4	8.89
OR6C76	0	genome.wustl.edu	37	12	55820521	55820521	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	55820521	55820521	C	T	SNP	OR6C76	ENST00000328314	human	ensembl	74_37	+1	known	nonsense	c.484	p.Q162*	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C76	HGNC	ENSG00000185821	tier1	-	-	100	0	0.00	55	45	45.00
OR7C2	0	genome.wustl.edu	37	19	15052470	15052470	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	15052470	15052470	C	T	SNP	OR7C2	ENST00000248072	human	ensembl	74_37	+1	known	missense	c.170	p.T57I	0.003	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7C2	HGNC	ENSG00000127529	tier1	rs139042107	-	71	0	0.00	42	25	37.31
OR7D2	0	genome.wustl.edu	37	19	9296598	9296598	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	9296598	9296598	G	T	SNP	OR7D2	ENST00000344248	human	ensembl	74_37	+1	known	silent	c.141	p.L47	0.993	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7D2	HGNC	ENSG00000188000	tier1	-	-	81	0	0.00	75	4	5.06
OR7E14P	0	genome.wustl.edu	37	11	17074030	17074030	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	17074030	17074030	C	T	SNP	OR7E14P	ENST00000530490	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	OR7E14P	HGNC	ENSG00000184669	tier1	-	-	136	0	0.00	89	44	33.08
OR8G1	0	genome.wustl.edu	37	11	124120822	124120822	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	124120822	124120822	G	A	SNP	OR8G1	ENST00000341493	human	ensembl	74_37	+1	known	missense	c.400	p.V134I	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8G1	HGNC	ENSG00000197849	tier1	-	-	164	0	0.00	79	63	44.37
ORAI3	0	genome.wustl.edu	37	16	30965124	30965124	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	30965124	30965124	G	T	SNP	ORAI3	ENST00000318663	human	ensembl	74_37	+1	known	nonsense	c.847	p.E283*	1.000	pfam_CRAC_channel	pfam_CRAC_channel	-	no_errors	ORAI3	HGNC	ENSG00000175938	tier1	-	-	41	0	0.00	19	4	17.39
OSBPL1A	0	genome.wustl.edu	37	18	21745097	21745097	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	21745097	21745097	T	-	DEL	OSBPL1A	ENST00000319481	human	ensembl	74_37	-1	known	frame_shift_del	c.2682	p.K894fs	0.958	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pleckstrin_homology,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,prints_Ankyrin_rpt	-	no_errors	OSBPL1A	HGNC	ENSG00000141447	tier1			51	0	0.00	33	27	45.00
OSBPL1A	0	genome.wustl.edu	37	18	21761133	21761133	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	21761133	21761133	G	T	SNP	OSBPL1A	ENST00000319481	human	ensembl	74_37	-1	known	silent	c.1788	p.L596	0.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pleckstrin_homology,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,prints_Ankyrin_rpt	-	no_errors	OSBPL1A	HGNC	ENSG00000141447	tier1	-	-	39	0	0.00	35	6	14.63
OSBPL2	0	genome.wustl.edu	37	20	60854257	60854258	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	60854257	60854258	-	C	INS	OSBPL2	ENST00000313733	human	ensembl	74_37	+1	known	frame_shift_ins	c.536_537	p.I182fs	1.000:1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd	-	no_errors	OSBPL2	HGNC	ENSG00000130703	tier1			80	0	0.00	59	31	34.44
OSBPL6	0	genome.wustl.edu	37	2	179201135	179201135	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	179201135	179201135	G	A	SNP	OSBPL6	ENST00000315022	human	ensembl	74_37	+1	known	silent	c.702	p.S234	0.020	NULL	pfam_Oxysterol-bd,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL6	HGNC	ENSG00000079156	tier1	-	-	20	0	0.00	8	10	55.56
OSBPL7	0	genome.wustl.edu	37	17	45885767	45885767	+	Splice_Site	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	45885767	45885767	T	G	SNP	OSBPL7	ENST00000007414	human	ensembl	74_37	-1	known	splice_site	c.2421-2	e22-2	1.000	-	-	-	no_errors	OSBPL7	HGNC	ENSG00000006025	tier1	-	-	56	0	0.00	36	22	37.93
OSCAR	0	genome.wustl.edu	37	19	54600285	54600285	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	54600285	54600285	G	T	SNP	OSCAR	ENST00000356532	human	ensembl	74_37	-1	known	silent	c.249	p.S83	0.000	smart_Ig_sub	smart_Ig_sub	-	no_errors	OSCAR	HGNC	ENSG00000170909				48	0	0.00	43	4	8.51
OTOF	0	genome.wustl.edu	37	2	26741944	26741944	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	26741944	26741944	C	T	SNP	OTOF	ENST00000272371	human	ensembl	74_37	-1	known	silent	c.261	p.K87	1.000	superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	OTOF	HGNC	ENSG00000115155				34	0	0.00	19	2	9.52
OTOG	0	genome.wustl.edu	37	11	17663676	17663676	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	17663676	17663676	C	T	SNP	OTOG	ENST00000399391	human	ensembl	74_37	+1	known	silent	c.8334	p.P2778	0.690	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_AbfB,pfam_TIL_dom,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom	-	no_errors	OTOG	HGNC	ENSG00000188162	tier1	-	-	72	0	0.00	49	4	7.55
OTUD5	0	genome.wustl.edu	37	X	48814242	48814242	+	Splice_Site	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	48814242	48814242	C	T	SNP	OTUD5	ENST00000484499	human	ensembl	74_37	-1	known	splice_site	c.NULL	NULL	1.000	-	-	-	no_errors	OTUD5	HGNC	ENSG00000068308	tier1	-	-	22	0	0.00	7	12	63.16
OTX1	0	genome.wustl.edu	37	2	63281286	63281286	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	63281286	63281286	C	T	SNP	OTX1	ENST00000282549	human	ensembl	74_37	+1	known	missense	c.202	p.R68W	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Otx_TF_C,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Otx1_TF,prints_Otx_TF	-	no_errors	OTX1	HGNC	ENSG00000115507	tier1	-	-	61	0	0.00	35	32	47.76
PA2G4	0	genome.wustl.edu	37	12	56505296	56505296	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	56505296	56505296	A	-	DEL	PA2G4	ENST00000303305	human	ensembl	74_37	+1	known	frame_shift_del	c.1102	p.K369fs	1.000	tigrfam_Pap_1	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain,tigrfam_Pap_1	-	no_errors	PA2G4	HGNC	ENSG00000170515	tier1			40	0	0.00	17	10	37.04
PABPC3	0	genome.wustl.edu	37	13	25671275	25671275	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	25671275	25671275	G	A	SNP	PABPC3	ENST00000281589	human	ensembl	74_37	+1	known	silent	c.939	p.A313	0.996	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC3	HGNC	ENSG00000151846	tier1	-	-	66	0	0.00	62	16	20.25
PABPN1L	0	genome.wustl.edu	37	16	88933000	88933001	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	88933000	88933001	-	G	INS	PABPN1L	ENST00000427766	human	ensembl	74_37	-1	known	frame_shift_ins	c.15_14	p.S6fs	0.028:0.047	NULL	NULL	-	no_errors	PABPN1L	HGNC	ENSG00000205022	tier1			49	0	0.00	13	11	45.83
PACSIN2	0	genome.wustl.edu	37	22	43287045	43287045	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	43287045	43287045	G	T	SNP	PACSIN2	ENST00000263246	human	ensembl	74_37	-1	known	missense	c.361	p.H121N	1.000	NULL	pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PACSIN2	HGNC	ENSG00000100266	tier1	-	-	104	0	0.00	76	4	5.00
PAFAH1B2	0	genome.wustl.edu	37	11	117031887	117031887	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	117031887	117031887	T	C	SNP	PAFAH1B2	ENST00000527958	human	ensembl	74_37	+1	known	silent	c.198	p.L66	0.997	pfam_Lipase_GDSL	pfam_Lipase_GDSL	-	no_errors	PAFAH1B2	HGNC	ENSG00000168092	tier1	-	-	91	0	0.00	71	39	35.14
PAIP2B	0	genome.wustl.edu	37	2	71417056	71417056	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	71417056	71417056	G	T	SNP	PAIP2B	ENST00000244221	human	ensembl	74_37	-1	known	missense	c.234	p.D78E	1.000	NULL	pfam_Ataxin-2_C	-	no_errors	PAIP2B	HGNC	ENSG00000124374	tier1	-	-	52	0	0.00	51	4	7.27
PAN2	0	genome.wustl.edu	37	12	56720180	56720180	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	56720180	56720180	C	T	SNP	PAN2	ENST00000425394	human	ensembl	74_37	-1	known	missense	c.1276	p.V426M	1.000	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,pfam_Peptidase_C19/C67,superfamily_RNaseH-like_dom,superfamily_WD40_repeat_dom,smart_Exonuclease,pfscan_Peptidase_C19/C67	-	no_errors	PAN2	HGNC	ENSG00000135473	tier1	rs140591449	-	97	0	0.00	40	27	40.30
PANK4	0	genome.wustl.edu	37	1	2450662	2450662	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	2450662	2450662	C	T	SNP	PANK4	ENST00000378466	human	ensembl	74_37	-1	known	missense	c.955	p.V319M	0.994	pfam_Type_II_PanK,pirsf_PanK_long,tigrfam_Type_II_PanK	pfam_Type_II_PanK,pfam_DUF89,superfamily_DUF89,pirsf_PanK_long,tigrfam_Type_II_PanK	-	no_errors	PANK4	HGNC	ENSG00000157881	tier1	-	-	75	0	0.00	31	29	48.33
PAPD5	0	genome.wustl.edu	37	16	50248153	50248153	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	50248153	50248153	A	-	DEL	PAPD5	ENST00000436909	human	ensembl	74_37	+1	known	frame_shift_del	c.739	p.T248fs	1.000	pfam_Nucleotidyltransferase	pfam_PAP_assoc,pfam_Nucleotidyltransferase	-	no_errors	PAPD5	HGNC	ENSG00000121274	tier1			48	0	0.00	41	22	34.92
PAPD5	0	genome.wustl.edu	37	16	50257096	50257096	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	50257096	50257096	G	A	SNP	PAPD5	ENST00000436909	human	ensembl	74_37	+1	known	silent	c.1134	p.R378	1.000	NULL	pfam_PAP_assoc,pfam_Nucleotidyltransferase	-	no_errors	PAPD5	HGNC	ENSG00000121274	tier1	-	-	43	0	0.00	27	19	40.43
PAPD5	0	genome.wustl.edu	37	16	50263455	50263455	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	50263455	50263455	A	-	DEL	PAPD5	ENST00000573002	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	PAPD5	HGNC	ENSG00000121274	tier1			46	0	0.00	22	17	43.59
PAPD5	0	genome.wustl.edu	37	16	50264212	50264213	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	50264212	50264213	AA	-	DEL	PAPD5	ENST00000573002	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.053:0.065	-	-	-	no_errors	PAPD5	HGNC	ENSG00000121274	tier1			13	0	0.00	11	2	15.38
PAPLN	0	genome.wustl.edu	37	14	73720568	73720568	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	73720568	73720568	G	A	SNP	PAPLN	ENST00000427855	human	ensembl	74_37	+1	known	missense	c.1201	p.V401M	0.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_Prot_inh_Kunz-m,pfam_PLAC,superfamily_Prot_inh_Kunz-m,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Prot_inh_Kunz-m,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like_dom,prints_Peptidase_M12B_ADAM-TS,prints_Prot_inh_Kunz-m	-	no_errors	PAPLN	HGNC	ENSG00000100767	tier1	-	-	70	0	0.00	43	31	41.89
PAPLN	0	genome.wustl.edu	37	14	73729128	73729128	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	73729128	73729128	C	T	SNP	PAPLN	ENST00000427855	human	ensembl	74_37	+1	known	silent	c.2316	p.F772	0.968	pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	pfam_Ig_I-set,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_Prot_inh_Kunz-m,pfam_PLAC,superfamily_Prot_inh_Kunz-m,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Prot_inh_Kunz-m,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like_dom,prints_Peptidase_M12B_ADAM-TS,prints_Prot_inh_Kunz-m	-	no_errors	PAPLN	HGNC	ENSG00000100767	tier1	rs144000569	-	74	0	0.00	38	25	39.68
PAPPA2	0	genome.wustl.edu	37	1	176708821	176708821	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	176708821	176708821	C	T	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	silent	c.3858	p.G1286	0.516	NULL	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	tier1	-	-	64	0	0.00	53	23	30.26
PARP1	0	genome.wustl.edu	37	1	226549886	226549889	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	226549886	226549889	TTTT	-	DEL	PARP1	ENST00000491816	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004:0.004:0.004:0.004	-	-	-	no_errors	PARP1	HGNC	ENSG00000143799	tier1			34	0	0.00	38	7	15.56
PARP12	0	genome.wustl.edu	37	7	139741628	139741628	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	139741628	139741628	G	T	SNP	PARP12	ENST00000263549	human	ensembl	74_37	-1	known	missense	c.998	p.S333Y	0.000	pfscan_WWE-dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Znf_CCCH,smart_Znf_CCCH,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP12	HGNC	ENSG00000059378	tier1	-	-	56	0	0.00	50	4	7.41
PARP6	0	genome.wustl.edu	37	15	72552881	72552881	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	72552881	72552881	G	-	DEL	PARP6	ENST00000287196	human	ensembl	74_37	-1	known	frame_shift_del	c.694	p.Q232fs	1.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP6	HGNC	ENSG00000137817	tier1			72	0	0.00	51	6	10.53
PBRM1	0	genome.wustl.edu	37	3	52662977	52662977	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	52662977	52662977	G	A	SNP	PBRM1	ENST00000296302	human	ensembl	74_37	-1	known	missense	c.1376	p.A459V	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	pfam_Bromodomain,pfam_BAH_dom,pfam_HMG_box_dom,superfamily_Bromodomain,superfamily_HMG_box_dom,smart_Bromodomain,smart_BAH_dom,smart_HMG_box_dom,pfscan_BAH_dom,pfscan_HMG_box_dom,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	PBRM1	HGNC	ENSG00000163939	tier1	-	-	41	0	0.00	20	14	40.00
PBX1	0	genome.wustl.edu	37	1	164529145	164529145	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	164529145	164529145	G	T	SNP	PBX1	ENST00000420696	human	ensembl	74_37	+1	known	missense	c.86	p.G29V	1.000	NULL	pfam_PBX,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	PBX1	HGNC	ENSG00000185630	tier1	-	-	39	0	0.00	43	17	28.33
PC	0	genome.wustl.edu	37	11	66616042	66616042	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	66616042	66616042	A	G	SNP	PC	ENST00000528224	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	PC	HGNC	ENSG00000173599	tier1	-	-	47	0	0.00	6	9	56.25
PCDH1	0	genome.wustl.edu	37	5	141243705	141243705	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	141243705	141243705	G	A	SNP	PCDH1	ENST00000287008	human	ensembl	74_37	-1	known	missense	c.2191	p.R731C	0.460	pfam_Cadherin,superfamily_Cadherin-like	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH1	HGNC	ENSG00000156453	tier1	-	-	24	0	0.00	4	9	69.23
PCDH10	0	genome.wustl.edu	37	4	134071772	134071772	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	134071772	134071772	C	T	SNP	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	silent	c.477	p.Y159	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650	tier1	-	-	27	0	0.00	16	13	44.83
PCDH11X	0	genome.wustl.edu	37	X	91133118	91133118	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	91133118	91133118	C	T	SNP	PCDH11X	ENST00000373094	human	ensembl	74_37	+1	known	missense	c.1879	p.P627S	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11X	HGNC	ENSG00000102290	tier1	-	-	24	0	0.00	2	24	92.31
PCDH15	0	genome.wustl.edu	37	10	55566542	55566542	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	55566542	55566542	C	-	DEL	PCDH15	ENST00000414778	human	ensembl	74_37	-1	known	frame_shift_del	c.4843	p.A1615fs	1.000	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275	tier1			51	0	0.00	25	19	43.18
PCDH15	0	genome.wustl.edu	37	10	55568657	55568657	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	55568657	55568657	G	T	SNP	PCDH15	ENST00000395445	human	ensembl	74_37	-1	novel	missense	c.5153	p.P1718H	0.000	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275	tier1	-	-	85	0	0.00	84	5	5.62
PCDH15	0	genome.wustl.edu	37	10	55719505	55719505	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	55719505	55719505	G	A	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	nonsense	c.3109	p.Q1037*	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275	tier1	-	-	34	0	0.00	29	24	45.28
PCDH17	0	genome.wustl.edu	37	13	58207948	58207948	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	58207948	58207948	C	T	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	missense	c.1268	p.T423M	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946	tier1	-	-	52	0	0.00	52	15	22.39
PCDH17	0	genome.wustl.edu	37	13	58208562	58208562	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	58208562	58208562	G	T	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	missense	c.1882	p.V628L	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946				22	0	0.00	24	3	11.11
PCDH19	0	genome.wustl.edu	37	X	99662505	99662505	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	99662505	99662505	G	-	DEL	PCDH19	ENST00000373034	human	ensembl	74_37	-1	known	frame_shift_del	c.1091	p.P364fs	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH19	HGNC	ENSG00000165194	tier1			14	0	0.00	2	6	75.00
PCDH7	0	genome.wustl.edu	37	4	30723074	30723074	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	30723074	30723074	G	A	SNP	PCDH7	ENST00000543491	human	ensembl	74_37	+1	known	silent	c.30	p.A10	1.000	NULL	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH7	HGNC	ENSG00000169851	tier1	-	-	47	0	0.00	24	12	33.33
PCDH9	0	genome.wustl.edu	37	13	67800478	67800478	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	67800478	67800478	C	T	SNP	PCDH9	ENST00000377865	human	ensembl	74_37	-1	known	missense	c.2095	p.E699K	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH9	HGNC	ENSG00000184226	tier1	-	-	68	0	0.00	53	19	26.39
PCDHA1	0	genome.wustl.edu	37	5	140167669	140167669	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140167669	140167669	C	T	SNP	PCDHA1	ENST00000504120	human	ensembl	74_37	+1	known	silent	c.1794	p.D598	0.949	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA1	HGNC	ENSG00000204970	tier1	-	-	213	0	0.00	102	85	44.97
PCDHA11	0	genome.wustl.edu	37	5	140250122	140250122	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140250122	140250122	G	A	SNP	PCDHA11	ENST00000398640	human	ensembl	74_37	+1	known	silent	c.1434	p.A478	0.034	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC	ENSG00000249158	tier1	-	-	242	0	0.00	131	93	41.52
PCDHA11	0	genome.wustl.edu	37	5	140250469	140250469	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140250469	140250469	G	A	SNP	PCDHA11	ENST00000398640	human	ensembl	74_37	+1	known	missense	c.1781	p.R594H	0.390	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC	ENSG00000249158	tier1	-	-	181	0	0.00	102	52	33.77
PCDHA12	0	genome.wustl.edu	37	5	140256774	140256774	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140256774	140256774	G	A	SNP	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	missense	c.1717	p.A573T	0.001	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664	tier1	-	-	225	0	0.00	98	73	42.69
PCDHA3	0	genome.wustl.edu	37	5	140180927	140180927	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140180927	140180927	G	A	SNP	PCDHA3	ENST00000522353	human	ensembl	74_37	+1	known	missense	c.145	p.A49T	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA3	HGNC	ENSG00000255408	tier1	-	-	108	0	0.00	66	43	39.45
PCDHA3	0	genome.wustl.edu	37	5	140182156	140182156	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140182156	140182156	C	T	SNP	PCDHA3	ENST00000522353	human	ensembl	74_37	+1	known	silent	c.1374	p.S458	0.001	superfamily_Cadherin-like,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA3	HGNC	ENSG00000255408	tier1	-	-	217	0	0.00	112	100	47.17
PCDHA8	0	genome.wustl.edu	37	5	140221181	140221181	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140221181	140221181	G	A	SNP	PCDHA8	ENST00000531613	human	ensembl	74_37	+1	known	missense	c.275	p.R92H	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA8	HGNC	ENSG00000204962	tier1	-	-	145	0	0.00	75	54	41.86
PCDHA8	0	genome.wustl.edu	37	5	140223137	140223137	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140223137	140223137	C	T	SNP	PCDHA8	ENST00000531613	human	ensembl	74_37	+1	known	missense	c.2231	p.A744V	0.021	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA8	HGNC	ENSG00000204962	tier1	-	-	75	0	0.00	40	38	48.72
PCDHA9	0	genome.wustl.edu	37	5	140229984	140229984	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140229984	140229984	G	A	SNP	PCDHA9	ENST00000532602	human	ensembl	74_37	+1	known	missense	c.1904	p.R635H	0.943	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA9	HGNC	ENSG00000204961	tier1	-	-	149	0	0.00	76	53	41.09
PCDHB13	0	genome.wustl.edu	37	5	140595235	140595235	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140595235	140595235	T	C	SNP	PCDHB13	ENST00000341948	human	ensembl	74_37	+1	known	missense	c.1540	p.F514L	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB13	HGNC	ENSG00000187372	tier1	-	-	201	0	0.00	165	9	5.17
PCDHB4	0	genome.wustl.edu	37	5	140502487	140502487	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140502487	140502487	A	-	DEL	PCDHB4	ENST00000194152	human	ensembl	74_37	+1	known	frame_shift_del	c.907	p.K305fs	0.078	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB4	HGNC	ENSG00000081818	tier1			22	0	0.00	13	7	35.00
PCDHB4	0	genome.wustl.edu	37	5	140503236	140503236	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140503236	140503236	C	T	SNP	PCDHB4	ENST00000194152	human	ensembl	74_37	+1	known	silent	c.1656	p.D552	0.843	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB4	HGNC	ENSG00000081818	tier1	-	-	139	0	0.00	86	61	41.50
PCDHB8	0	genome.wustl.edu	37	5	140559277	140559277	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140559277	140559277	C	T	SNP	PCDHB8	ENST00000239444	human	ensembl	74_37	+1	known	silent	c.1662	p.D554	0.988	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB8	HGNC	ENSG00000120322				209	0	0.00	144	9	5.88
PCDHGA1	0	genome.wustl.edu	37	5	140712338	140712338	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140712338	140712338	C	T	SNP	PCDHGA1	ENST00000517417	human	ensembl	74_37	+1	known	missense	c.2087	p.A696V	0.999	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA1	HGNC	ENSG00000204956	tier1	-	-	129	0	0.00	70	70	50.00
PCDHGA11	0	genome.wustl.edu	37	5	140801619	140801619	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140801619	140801619	C	T	SNP	PCDHGA11	ENST00000398587	human	ensembl	74_37	+1	known	silent	c.825	p.N275	0.570	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA11	HGNC	ENSG00000253873	tier1	-	-	38	0	0.00	38	13	25.49
PCDHGA11	0	genome.wustl.edu	37	5	140801720	140801721	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140801720	140801721	-	T	INS	PCDHGA11	ENST00000398587	human	ensembl	74_37	+1	known	frame_shift_ins	c.926_927	p.E311fs	1.000:1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA11	HGNC	ENSG00000253873	tier1			34	0	0.00	35	10	22.22
PCDHGA11	0	genome.wustl.edu	37	5	140802149	140802149	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140802149	140802149	T	-	DEL	PCDHGA11	ENST00000398587	human	ensembl	74_37	+1	known	frame_shift_del	c.1355	p.P454fs	0.000	superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA11	HGNC	ENSG00000253873	tier1			58	0	0.00	32	16	33.33
PCDHGA12	0	genome.wustl.edu	37	5	140810542	140810542	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140810542	140810542	G	A	SNP	PCDHGA12	ENST00000252085	human	ensembl	74_37	+1	known	silent	c.216	p.T72	0.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA12	HGNC	ENSG00000253159	tier1	-	-	34	0	0.00	20	18	46.15
PCDHGA5	0	genome.wustl.edu	37	5	140744613	140744613	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140744613	140744613	C	T	SNP	PCDHGA5	ENST00000518069	human	ensembl	74_37	+1	known	missense	c.716	p.A239V	0.174	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA5	HGNC	ENSG00000253485	tier1	-	-	26	0	0.00	12	7	36.84
PCDHGA9	0	genome.wustl.edu	37	5	140784404	140784404	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140784404	140784404	G	A	SNP	PCDHGA9	ENST00000573521	human	ensembl	74_37	+1	known	missense	c.1885	p.A629T	0.011	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA9	HGNC	ENSG00000261934	tier1	-	-	104	0	0.00	61	37	37.76
PCDHGB3	0	genome.wustl.edu	37	5	140750891	140750892	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140750891	140750892	AG	-	DEL	PCDHGB3	ENST00000576222	human	ensembl	74_37	+1	known	frame_shift_del	c.930_931	p.D313fs	0.133:0.069	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB3	HGNC	ENSG00000262209	tier1			48	0	0.00	25	18	41.86
PCDHGC3	0	genome.wustl.edu	37	5	140857922	140857922	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	140857922	140857922	G	A	SNP	PCDHGC3	ENST00000308177	human	ensembl	74_37	+1	known	missense	c.2239	p.V747M	0.884	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC3	HGNC	ENSG00000240184	tier1	-	-	41	0	0.00	27	11	28.95
PCLO	0	genome.wustl.edu	37	7	82791762	82791762	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	82791762	82791762	G	A	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	silent	c.147	p.S49	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	145	0	0.00	65	41	38.68
PCNT	0	genome.wustl.edu	37	21	47863768	47863768	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	47863768	47863768	C	-	DEL	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	frame_shift_del	c.9746	p.P3251fs	0.023	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299	tier1			98	0	0.00	37	25	40.32
PCNXL2	0	genome.wustl.edu	37	1	233134043	233134043	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	233134043	233134043	G	A	SNP	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	silent	c.5745	p.G1915	0.000	NULL	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749	tier1	-	-	39	0	0.00	14	17	54.84
PCNXL2	0	genome.wustl.edu	37	1	233337948	233337949	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	233337948	233337949	TT	-	DEL	PCNXL2	ENST00000430153	human	ensembl	74_37	-1	known	frame_shift_del	c.809_808	p.K270fs	0.000:0.005	NULL	NULL	-	no_errors	PCNXL2	HGNC	ENSG00000135749	tier1			79	0	0.00	39	26	40.00
PCNXL3	0	genome.wustl.edu	37	11	65403715	65403715	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	65403715	65403715	G	A	SNP	PCNXL3	ENST00000355703	human	ensembl	74_37	+1	known	missense	c.5530	p.G1844S	0.338	NULL	pfam_Pecanex	-	no_errors	PCNXL3	HGNC	ENSG00000197136	tier1	-	-	45	0	0.00	25	18	40.91
PCNXL4	0	genome.wustl.edu	37	14	60591260	60591260	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	60591260	60591260	G	A	SNP	PCNXL4	ENST00000404681	human	ensembl	74_37	+1	known	missense	c.2371	p.A791T	0.000	NULL	pfam_Pecanex	-	no_errors	PCNXL4	HGNC	ENSG00000126773	tier1	-	-	15	0	0.00	12	12	50.00
PCSK9	0	genome.wustl.edu	37	1	55521773	55521773	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	55521773	55521773	C	T	SNP	PCSK9	ENST00000302118	human	ensembl	74_37	+1	known	missense	c.907	p.R303C	0.669	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom	pfam_Peptidase_S8/S53_dom,pfam_Inhibitor_I9,superfamily_Peptidase_S8/S53_dom,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK9	HGNC	ENSG00000169174				35	0	0.00	22	9	29.03
PDCD1LG2	0	genome.wustl.edu	37	9	5557753	5557756	+	Splice_Site	DEL	GTAA	GTAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GTAA	GTAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	5557753	5557756	GTAA	-	DEL	PDCD1LG2	ENST00000397747	human	ensembl	74_37	+1	known	splice_site_del	c.766+1_766+1	e4+1	1.000:1.000:0.997:0.998	-	-	-	no_errors	PDCD1LG2	HGNC	ENSG00000197646	tier1			66	0	0.00	25	11	30.56
PDCL	0	genome.wustl.edu	37	9	125582521	125582521	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	125582521	125582521	C	T	SNP	PDCL	ENST00000259467	human	ensembl	74_37	-1	known	missense	c.749	p.R250H	1.000	pfam_Phosducin_thioredoxin-like_dom,superfamily_Thioredoxin-like_fold	pfam_Phosducin_thioredoxin-like_dom,superfamily_Thioredoxin-like_fold,prints_Phosducin	-	no_errors	PDCL	HGNC	ENSG00000136940	tier1	-	-	23	0	0.00	16	10	38.46
PDE4B	0	genome.wustl.edu	37	1	66838073	66838073	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	66838073	66838073	T	G	SNP	PDE4B	ENST00000329654	human	ensembl	74_37	+1	known	missense	c.1923	p.I641M	1.000	pfam_PDEase_catalytic_dom	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE4B	HGNC	ENSG00000184588	tier1	-	-	50	0	0.00	20	16	44.44
PDE4C	0	genome.wustl.edu	37	19	18330172	18330172	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	18330172	18330172	C	T	SNP	PDE4C	ENST00000355502	human	ensembl	74_37	-1	known	missense	c.838	p.A280T	0.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE4C	HGNC	ENSG00000105650	tier1	-	-	68	0	0.00	30	37	55.22
PDGFC	0	genome.wustl.edu	37	4	157688926	157688926	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	157688926	157688926	T	G	SNP	PDGFC	ENST00000502773	human	ensembl	74_37	-1	known	missense	c.920	p.E307A	1.000	pfam_PDGF/VEGF_dom,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	pfam_CUB_dom,pfam_PDGF/VEGF_dom,superfamily_CUB_dom,smart_CUB_dom,smart_PDGF/VEGF_dom,pfscan_CUB_dom,pfscan_PDGF/VEGF_dom	-	no_errors	PDGFC	HGNC	ENSG00000145431	tier1	-	-	34	0	0.00	19	16	45.71
PDGFRB	0	genome.wustl.edu	37	5	149493445	149493445	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	149493445	149493445	A	-	DEL	PDGFRB	ENST00000520851	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.978	-	-	-	no_errors	PDGFRB	HGNC	ENSG00000113721	tier1			28	0	0.00	9	9	50.00
PDGFRB	0	genome.wustl.edu	37	5	149513315	149513315	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	149513315	149513315	C	T	SNP	PDGFRB	ENST00000261799	human	ensembl	74_37	-1	known	silent	c.768	p.R256	0.225	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	PDGFRB	HGNC	ENSG00000113721	tier1	-	-	40	0	0.00	31	13	29.55
PDLIM2	0	genome.wustl.edu	37	8	22447194	22447195	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	22447194	22447195	-	C	INS	PDLIM2	ENST00000308354	human	ensembl	74_37	+1	known	frame_shift_ins	c.1453_1454	p.R487fs	0.421:0.939	NULL	pfam_PDZ,pfam_Znf_LIM,superfamily_PDZ,smart_PDZ,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	PDLIM2	HGNC	ENSG00000120913	tier1			58	0	0.00	74	29	28.16
PDLIM4	0	genome.wustl.edu	37	5	131607782	131607782	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	131607782	131607782	G	A	SNP	PDLIM4	ENST00000253754	human	ensembl	74_37	+1	known	missense	c.853	p.G285S	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_PDZ,pfam_Znf_LIM,superfamily_PDZ,smart_PDZ,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	PDLIM4	HGNC	ENSG00000131435	tier1	rs202040278	-	46	0	0.00	15	14	48.28
PDS5B	0	genome.wustl.edu	37	13	33344888	33344888	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	33344888	33344888	A	-	DEL	PDS5B	ENST00000315596	human	ensembl	74_37	+1	known	frame_shift_del	c.4161	p.N1390fs	0.002	NULL	superfamily_ARM-type_fold	-	no_errors	PDS5B	HGNC	ENSG00000083642	tier1			15	0	0.00	8	10	55.56
PDSS1	0	genome.wustl.edu	37	10	27035432	27035432	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	27035432	27035432	C	A	SNP	PDSS1	ENST00000470978	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	PDSS1	HGNC	ENSG00000148459	tier1	-	-	53	0	0.00	46	31	40.26
PDXDC2P	0	genome.wustl.edu	37	16	70072984	70072984	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	70072984	70072984	T	-	DEL	PDXDC2P	ENST00000530079	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PDXDC2P	HGNC	ENSG00000196696	tier1			21	0	0.00	16	12	42.86
PDZD3	0	genome.wustl.edu	37	11	119058335	119058335	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	119058335	119058335	C	-	DEL	PDZD3	ENST00000392817	human	ensembl	74_37	+1	known	frame_shift_del	c.781	p.A264fs	0.987	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD3	HGNC	ENSG00000172367	tier1			42	0	0.00	38	2	5.00
PDZD7	0	genome.wustl.edu	37	10	102778605	102778605	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	102778605	102778605	C	T	SNP	PDZD7	ENST00000370215	human	ensembl	74_37	-1	known	missense	c.1298	p.R433H	0.998	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD7	HGNC	ENSG00000186862	tier1	-	-	77	0	0.00	28	21	42.86
PDZD7	0	genome.wustl.edu	37	10	102783244	102783244	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	102783244	102783244	C	T	SNP	PDZD7	ENST00000370215	human	ensembl	74_37	-1	known	missense	c.491	p.R164Q	0.997	superfamily_PDZ,smart_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD7	HGNC	ENSG00000186862	tier1	-	-	48	0	0.00	36	4	10.00
PDZD9	0	genome.wustl.edu	37	16	21995730	21995730	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	21995730	21995730	G	T	SNP	PDZD9	ENST00000424898	human	ensembl	74_37	-1	known	missense	c.653	p.A218D	0.669	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD9	HGNC	ENSG00000155714				121	0	0.00	126	8	5.93
PEG3	0	genome.wustl.edu	37	19	57325797	57325797	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	57325797	57325797	C	A	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	missense	c.4013	p.G1338V	0.740	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300	tier1	-	-	27	0	0.00	23	15	39.47
PEMT	0	genome.wustl.edu	37	17	17409600	17409600	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	17409600	17409600	C	T	SNP	PEMT	ENST00000435340	human	ensembl	74_37	-1	putative	missense	c.562	p.G188R	0.766	NULL	pfam_Phopholipid_MeTrfase	-	no_errors	PEMT	HGNC	ENSG00000133027	tier1	-	-	92	0	0.00	56	33	37.08
PENK	0	genome.wustl.edu	37	8	57358249	57358249	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	57358249	57358249	G	A	SNP	PENK	ENST00000518770	human	ensembl	74_37	-1	putative	silent	c.264	p.G88	0.000	NULL	pfam_Opioid_neupept,prints_Proenkphlin_A	-	no_errors	PENK	HGNC	ENSG00000181195				35	0	0.00	26	10	27.78
PER1	0	genome.wustl.edu	37	17	8046844	8046844	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	8046844	8046844	C	T	SNP	PER1	ENST00000317276	human	ensembl	74_37	-1	known	missense	c.2812	p.A938T	0.258	NULL	pfam_Period_circadian-like_C,pfam_PAS_fold_3,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PER1	HGNC	ENSG00000179094	tier1	-	-	25	0	0.00	8	7	46.67
PER1	0	genome.wustl.edu	37	17	8052896	8052896	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	8052896	8052896	C	T	SNP	PER1	ENST00000317276	human	ensembl	74_37	-1	known	missense	c.737	p.R246Q	0.975	superfamily_PAS,smart_PAS	pfam_Period_circadian-like_C,pfam_PAS_fold_3,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PER1	HGNC	ENSG00000179094	tier1	rs139250084	-	70	0	0.00	41	26	38.81
PER2	0	genome.wustl.edu	37	2	239161960	239161960	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	239161960	239161960	G	T	SNP	PER2	ENST00000254657	human	ensembl	74_37	-1	known	missense	c.2704	p.P902T	0.754	NULL	pfam_Period_circadian-like_C,pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PER2	HGNC	ENSG00000132326				71	0	0.00	62	4	5.97
PER3	0	genome.wustl.edu	37	1	7887253	7887253	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	7887253	7887253	C	T	SNP	PER3	ENST00000361923	human	ensembl	74_37	+1	known	missense	c.2240	p.P747L	0.001	NULL	pfam_Period_circadian-like_C,pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PER3	HGNC	ENSG00000049246				15	0	0.00	5	6	54.55
PEX1	0	genome.wustl.edu	37	7	92132381	92132381	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	92132381	92132381	C	T	SNP	PEX1	ENST00000248633	human	ensembl	74_37	-1	known	missense	c.2200	p.V734I	0.032	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_ATPase_AAA_core,pfam_Peroxisome_synth_fac_1_a/b,pfam_PEX-1N,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase	-	no_errors	PEX1	HGNC	ENSG00000127980	tier1	rs141510219	-	52	0	0.00	38	18	32.14
PEX14	0	genome.wustl.edu	37	1	10596278	10596278	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	10596278	10596278	G	T	SNP	PEX14	ENST00000356607	human	ensembl	74_37	+1	known	silent	c.93	p.T31	0.895	pfam_Pex14_N	pfam_Pex14_N	-	no_errors	PEX14	HGNC	ENSG00000142655	tier1	-	-	49	0	0.00	34	5	12.82
PFKL	0	genome.wustl.edu	37	21	45742906	45742906	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	45742906	45742906	G	A	SNP	PFKL	ENST00000403390	human	ensembl	74_37	+1	known	missense	c.1612	p.A538T	0.996	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,tigrfam_6-phosphofructokinase_euk	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,prints_Phosphofructokinase,tigrfam_6-phosphofructokinase_euk	-	no_errors	PFKL	HGNC	ENSG00000141959	tier1	-	-	56	0	0.00	49	18	26.87
PGK2	0	genome.wustl.edu	37	6	49754577	49754577	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	49754577	49754577	A	G	SNP	PGK2	ENST00000304801	human	ensembl	74_37	-1	known	silent	c.324	p.C108	0.995	pfam_Phosphoglycerate_kinase,superfamily_Phosphoglycerate_kinase	pfam_Phosphoglycerate_kinase,superfamily_Phosphoglycerate_kinase,prints_Phosphoglycerate_kinase	-	no_errors	PGK2	HGNC	ENSG00000170950	tier1	-	-	90	0	0.00	40	20	33.33
PGPEP1L	0	genome.wustl.edu	37	15	99512698	99512698	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	99512698	99512698	T	C	SNP	PGPEP1L	ENST00000378919	human	ensembl	74_37	-1	known	silent	c.327	p.V109	0.000	pfam_Peptidase_C15,superfamily_Peptidase_C15-like	pfam_Peptidase_C15,superfamily_Peptidase_C15-like	-	no_errors	PGPEP1L	HGNC	ENSG00000183571	tier1	-	-	53	0	0.00	28	12	30.00
PGPEP1L	0	genome.wustl.edu	37	15	99512874	99512874	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	99512874	99512874	C	T	SNP	PGPEP1L	ENST00000378919	human	ensembl	74_37	-1	known	missense	c.151	p.V51M	0.989	pfam_Peptidase_C15,superfamily_Peptidase_C15-like	pfam_Peptidase_C15,superfamily_Peptidase_C15-like	-	no_errors	PGPEP1L	HGNC	ENSG00000183571	tier1	rs201422918	-	67	0	0.00	57	4	6.56
PGR	0	genome.wustl.edu	37	11	100962608	100962608	+	Splice_Site	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	100962608	100962608	C	A	SNP	PGR	ENST00000325455	human	ensembl	74_37	-1	known	splice_site	c.1790-1	e3-1	1.000	-	-	-	no_errors	PGR	HGNC	ENSG00000082175	tier1	-	-	51	0	0.00	21	13	38.24
PHACTR3	0	genome.wustl.edu	37	20	58416532	58416532	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	58416532	58416532	C	T	SNP	PHACTR3	ENST00000371015	human	ensembl	74_37	+1	known	missense	c.1529	p.A510V	1.000	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR3	HGNC	ENSG00000087495	tier1	-	-	47	0	0.00	41	17	28.81
PHACTR3	0	genome.wustl.edu	37	20	58422169	58422169	+	Splice_Site	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	58422169	58422169	G	T	SNP	PHACTR3	ENST00000371015	human	ensembl	74_37	+1	known	splice_site	c.1665-1	e13-1	1.000	-	-	-	no_errors	PHACTR3	HGNC	ENSG00000087495	tier1	-	-	26	0	0.00	39	4	9.30
PHF15	0	genome.wustl.edu	37	5	133897992	133897992	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	133897992	133897992	G	T	SNP	PHF15	ENST00000395003	human	ensembl	74_37	+1	known	missense	c.787	p.A263S	1.000	superfamily_Znf_FYVE_PHD	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF15	HGNC	ENSG00000043143	tier1	-	-	89	0	0.00	69	4	5.48
PHF15	0	genome.wustl.edu	37	5	133914940	133914940	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	133914940	133914940	G	T	SNP	PHF15	ENST00000395003	human	ensembl	74_37	+1	known	missense	c.2306	p.G769V	0.880	NULL	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF15	HGNC	ENSG00000043143				45	0	0.00	44	4	8.33
PHF17	0	genome.wustl.edu	37	4	129752963	129752963	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	129752963	129752963	G	A	SNP	PHF17	ENST00000226319	human	ensembl	74_37	+1	known	missense	c.50	p.G17D	1.000	NULL	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF17	HGNC	ENSG00000077684	tier1	-	-	121	0	0.00	73	35	32.11
PHF17	0	genome.wustl.edu	37	4	129783389	129783389	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	129783389	129783389	T	C	SNP	PHF17	ENST00000413543	human	ensembl	74_37	+1	known	silent	c.1512	p.I504	0.990	NULL	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF17	HGNC	ENSG00000077684	tier1	-	-	34	0	0.00	17	10	37.04
PHF2	0	genome.wustl.edu	37	9	96422612	96422612	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	96422612	96422612	A	-	DEL	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	frame_shift_del	c.1468	p.K492fs	1.000	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724	tier1			28	0	0.00	14	7	33.33
PHF2	0	genome.wustl.edu	37	9	96422679	96422679	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	96422679	96422679	C	A	SNP	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	missense	c.1535	p.P512H	1.000	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724	tier1	-	-	12	0	0.00	4	5	55.56
PHF2	0	genome.wustl.edu	37	9	96422621	96422621	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	96422621	96422621	A	G	SNP	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	missense	c.1477	p.T493A	1.000	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724				24	0	0.00	14	4	22.22
PHF2	0	genome.wustl.edu	37	9	96422642	96422642	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	96422642	96422642	C	A	SNP	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	missense	c.1498	p.P500T	1.000	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724				21	0	0.00	10	3	23.08
PHF20L1	0	genome.wustl.edu	37	8	133826909	133826909	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	133826909	133826909	A	-	DEL	PHF20L1	ENST00000395386	human	ensembl	74_37	+1	putative	frame_shift_del	c.958	p.N322fs	1.000	NULL	pfam_DUF3776,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Tudor-like_plant	-	no_errors	PHF20L1	HGNC	ENSG00000129292	tier1			31	0	0.00	38	9	19.15
PHF21B	0	genome.wustl.edu	37	22	45289355	45289355	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	45289355	45289355	G	A	SNP	PHF21B	ENST00000313237	human	ensembl	74_37	-1	known	silent	c.942	p.S314	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF21B	HGNC	ENSG00000056487	tier1	-	-	38	0	0.00	20	13	39.39
PHF21B	0	genome.wustl.edu	37	22	45289398	45289398	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	45289398	45289398	C	T	SNP	PHF21B	ENST00000313237	human	ensembl	74_37	-1	known	missense	c.899	p.R300Q	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF21B	HGNC	ENSG00000056487	tier1	-	-	51	0	0.00	19	16	45.71
PHF3	0	genome.wustl.edu	37	6	64415953	64415953	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	64415953	64415953	A	-	DEL	PHF3	ENST00000262043	human	ensembl	74_37	+1	known	frame_shift_del	c.3402	p.V1137fs	0.986	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	PHF3	HGNC	ENSG00000118482	tier1			30	0	0.00	21	14	40.00
PHGR1	0	genome.wustl.edu	37	15	40648457	40648457	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	40648457	40648457	C	0	DEL	PHGR1	ENST00000448599	human	ensembl	74_37	+1	known	frame_shift_del	c.202	p.P69fs	0.000	NULL	NULL	-	no_errors	PHGR1	HGNC	ENSG00000233041				8	0	0.00	3	4	57.14
PHKG2	0	genome.wustl.edu	37	16	30767570	30767570	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	30767570	30767570	A	G	SNP	PHKG2	ENST00000563588	human	ensembl	74_37	+1	known	silent	c.624	p.P208	0.601	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Phosph_kin_gamma,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PHKG2	HGNC	ENSG00000156873	tier1	-	-	95	0	0.00	80	6	6.98
PHLPP1	0	genome.wustl.edu	37	18	60645905	60645905	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	60645905	60645905	C	T	SNP	PHLPP1	ENST00000262719	human	ensembl	74_37	+1	known	silent	c.4395	p.G1465	0.708	NULL	pfam_PP2C-like_dom,pfam_Leu-rich_rpt,superfamily_PP2C-like_dom,smart_Leu-rich_rpt_typical-subtyp,smart_PP2C-like_dom,pfscan_Pleckstrin_homology	-	no_errors	PHLPP1	HGNC	ENSG00000081913	tier1	-	-	50	0	0.00	21	15	41.67
PHTF2	0	genome.wustl.edu	37	7	77539699	77539699	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	77539699	77539699	T	C	SNP	PHTF2	ENST00000248550	human	ensembl	74_37	+1	known	missense	c.749	p.L250P	1.000	NULL	pfam_TF_homeodomain_male	-	no_errors	PHTF2	HGNC	ENSG00000006576	tier1	-	-	67	0	0.00	54	32	37.21
PHTF2	0	genome.wustl.edu	37	7	77569581	77569581	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	77569581	77569581	T	-	DEL	PHTF2	ENST00000248550	human	ensembl	74_37	+1	known	frame_shift_del	c.1702	p.L570fs	1.000	NULL	pfam_TF_homeodomain_male	-	no_errors	PHTF2	HGNC	ENSG00000006576	tier1			50	0	0.00	58	22	27.50
PHYHIP	0	genome.wustl.edu	37	8	22084495	22084495	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	22084495	22084495	A	G	SNP	PHYHIP	ENST00000454243	human	ensembl	74_37	-1	known	missense	c.209	p.M70T	1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	PHYHIP	HGNC	ENSG00000168490	tier1	-	-	31	0	0.00	27	8	22.86
PI4KA	0	genome.wustl.edu	37	22	21119499	21119499	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	21119499	21119499	C	T	SNP	PI4KA	ENST00000255882	human	ensembl	74_37	-1	known	silent	c.2463	p.E821	0.994	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PI4KA	HGNC	ENSG00000241973	tier1	-	-	13	0	0.00	21	12	36.36
PIAS1	0	genome.wustl.edu	37	15	68438944	68438944	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	68438944	68438944	G	T	SNP	PIAS1	ENST00000249636	human	ensembl	74_37	+1	known	missense	c.734	p.R245L	1.000	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS1	HGNC	ENSG00000033800	tier1	-	-	52	0	0.00	47	5	9.62
PIAS1	0	genome.wustl.edu	37	15	68438931	68438931	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	68438931	68438931	G	T	SNP	PIAS1	ENST00000249636	human	ensembl	74_37	+1	known	missense	c.721	p.V241L	1.000	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS1	HGNC	ENSG00000033800				51	0	0.00	46	3	6.12
PIAS4	0	genome.wustl.edu	37	19	4033558	4033558	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	4033558	4033558	C	T	SNP	PIAS4	ENST00000262971	human	ensembl	74_37	+1	known	silent	c.1122	p.Y374	0.959	pfscan_Znf_MIZ	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS4	HGNC	ENSG00000105229	tier1	-	-	67	0	0.00	33	25	43.10
PIEZO2	0	genome.wustl.edu	37	18	10752835	10752835	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	10752835	10752835	G	T	SNP	PIEZO2	ENST00000582913	human	ensembl	74_37	-1	known	silent	c.3933	p.L1311	1.000	NULL	NULL	-	no_errors	PIEZO2	HGNC	ENSG00000154864	tier1	-	-	21	0	0.00	18	8	30.77
PIEZO2	0	genome.wustl.edu	37	18	10759835	10759835	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	10759835	10759835	G	A	SNP	PIEZO2	ENST00000582913	human	ensembl	74_37	-1	known	silent	c.3490	p.L1164	1.000	NULL	NULL	-	no_errors	PIEZO2	HGNC	ENSG00000154864	tier1	-	-	37	0	0.00	22	15	40.54
PIGC	0	genome.wustl.edu	37	1	172362949	172362949	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	172362949	172362949	G	-	DEL	PIGC	ENST00000484368	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	PIGC	HGNC	ENSG00000135845	tier1			59	0	0.00	59	30	33.71
PIGQ	0	genome.wustl.edu	37	16	624168	624168	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	624168	624168	G	T	SNP	PIGQ	ENST00000026218	human	ensembl	74_37	+1	known	missense	c.94	p.V32F	1.000	NULL	pfam_GlcNAc_Gpi1	-	no_errors	PIGQ	HGNC	ENSG00000007541	tier1	-	-	42	0	0.00	43	4	8.51
PIK3AP1	0	genome.wustl.edu	37	10	98363714	98363714	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	98363714	98363714	G	-	DEL	PIK3AP1	ENST00000489982	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PIK3AP1	HGNC	ENSG00000155629	tier1			22	0	0.00	16	2	11.11
PIK3C2B	0	genome.wustl.edu	37	1	204425245	204425245	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	204425245	204425245	G	A	SNP	PIK3C2B	ENST00000496872	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PIK3C2B	HGNC	ENSG00000133056	tier1	-	-	30	0	0.00	30	11	26.83
PIK3CB	0	genome.wustl.edu	37	3	138456559	138456559	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	138456559	138456559	A	C	SNP	PIK3CB	ENST00000289153	human	ensembl	74_37	-1	known	missense	c.791	p.I264S	1.000	pfam_PI3K_Ras-bd_dom,smart_PI3K_Ras-bd_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_adapt-bd_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,superfamily_Kinase-like_dom,superfamily_C2_dom,superfamily_ARM-type_fold,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CB	HGNC	ENSG00000051382	tier1	-	-	41	0	0.00	19	13	40.62
PIK3R6	0	genome.wustl.edu	37	17	8736327	8736327	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	8736327	8736327	G	A	SNP	PIK3R6	ENST00000311434	human	ensembl	74_37	-1	known	silent	c.681	p.H227	0.978	pfam_PI3K_1B_gamma_p101_su	pfam_PI3K_1B_gamma_p101_su	-	no_errors	PIK3R6	HGNC	ENSG00000174083	tier1	-	-	48	0	0.00	27	11	28.95
PIK3R6	0	genome.wustl.edu	37	17	8741940	8741940	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	8741940	8741940	C	T	SNP	PIK3R6	ENST00000311434	human	ensembl	74_37	-1	known	missense	c.130	p.E44K	0.984	pfam_PI3K_1B_gamma_p101_su	pfam_PI3K_1B_gamma_p101_su	-	no_errors	PIK3R6	HGNC	ENSG00000174083	tier1	-	-	19	0	0.00	20	16	44.44
PIKFYVE	0	genome.wustl.edu	37	2	209190598	209190598	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	209190598	209190598	T	G	SNP	PIKFYVE	ENST00000264380	human	ensembl	74_37	+1	known	missense	c.3063	p.D1021E	1.000	NULL	pfam_PInositol-4-P-5-kinase_core,pfam_Cpn60/TCP-1,pfam_DEP_dom,pfam_Znf_FYVE,superfamily_GroEL-like_apical_dom,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,smart_DEP_dom,smart_PInositol-4P-5-kinase_core_sub,pfscan_DEP_dom,pfscan_Znf_FYVE-rel	-	no_errors	PIKFYVE	HGNC	ENSG00000115020	tier1	-	-	38	0	0.00	34	15	30.61
PINK1	0	genome.wustl.edu	37	1	20975711	20975711	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	20975711	20975711	G	A	SNP	PINK1	ENST00000321556	human	ensembl	74_37	+1	known	missense	c.1475	p.R492Q	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PINK1	HGNC	ENSG00000158828	tier1	rs143620063	-	18	0	0.00	16	7	30.43
PINK1	0	genome.wustl.edu	37	1	20976948	20976948	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	20976948	20976948	G	A	SNP	PINK1	ENST00000321556	human	ensembl	74_37	+1	known	missense	c.1510	p.A504T	0.999	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PINK1	HGNC	ENSG00000158828	tier1	-	-	68	0	0.00	52	31	37.35
PIP4K2B	0	genome.wustl.edu	37	17	36943140	36943140	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	36943140	36943140	T	C	SNP	PIP4K2B	ENST00000269554	human	ensembl	74_37	-1	known	missense	c.193	p.M65V	1.000	NULL	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP4K2B	HGNC	ENSG00000141720	tier1	-	-	90	0	0.00	47	40	45.98
PIPSL	0	genome.wustl.edu	37	10	95718520	95718520	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	95718520	95718520	C	T	SNP	PIPSL	ENST00000480546	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.852	-	-	-	no_errors	PIPSL	HGNC	ENSG00000180764	tier1	-	-	77	0	0.00	36	19	34.55
PIPSL	0	genome.wustl.edu	37	10	95719860	95719860	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	95719860	95719860	G	A	SNP	PIPSL	ENST00000480546	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.977	-	-	-	no_errors	PIPSL	HGNC	ENSG00000180764	tier1	-	-	115	0	0.00	59	40	40.40
PISD	0	genome.wustl.edu	37	22	32046690	32046690	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	32046690	32046690	C	T	SNP	PISD	ENST00000439502	human	ensembl	74_37	-1	known	missense	c.140	p.R47H	0.055	NULL	pfam_PS_Dcarbxylase,tigrfam_PS_decarb	-	no_errors	PISD	HGNC	ENSG00000241878	tier1	-	-	24	0	0.00	20	14	41.18
PJA2	0	genome.wustl.edu	37	5	108691648	108691648	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	108691648	108691648	C	T	SNP	PJA2	ENST00000361189	human	ensembl	74_37	-1	known	missense	c.1732	p.A578T	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PJA2	HGNC	ENSG00000198961	tier1	-	-	40	0	0.00	26	13	33.33
PKD1	0	genome.wustl.edu	37	16	2156530	2156530	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	2156530	2156530	C	T	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	missense	c.7358	p.R2453H	0.000	pfam_PKD/REJ-like,pfscan_REJ-like,tigrfam_Polycystin_cat	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710	tier1	-	-	74	0	0.00	29	27	48.21
PKD1L1	0	genome.wustl.edu	37	7	47842891	47842891	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	47842891	47842891	C	T	SNP	PKD1L1	ENST00000289672	human	ensembl	74_37	-1	known	missense	c.7879	p.V2627I	0.000	pfam_PKD1_2_channel	pfam_PKD/REJ-like,pfam_PKD1_2_channel,pfam_PKD_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,superfamily_PKD_dom,smart_PKD/Chitinase_dom,smart_PLAT/LH2_dom,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like	-	no_errors	PKD1L1	HGNC	ENSG00000158683	tier1	-	-	42	0	0.00	30	23	43.40
PKD1L1	0	genome.wustl.edu	37	7	47852865	47852865	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	47852865	47852865	G	A	SNP	PKD1L1	ENST00000289672	human	ensembl	74_37	-1	known	silent	c.7200	p.I2400	0.000	NULL	pfam_PKD/REJ-like,pfam_PKD1_2_channel,pfam_PKD_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,superfamily_PKD_dom,smart_PKD/Chitinase_dom,smart_PLAT/LH2_dom,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like	-	no_errors	PKD1L1	HGNC	ENSG00000158683	tier1	-	-	82	0	0.00	25	28	52.83
PKHD1L1	0	genome.wustl.edu	37	8	110476889	110476889	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	110476889	110476889	G	A	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	missense	c.7828	p.E2610K	0.996	superfamily_Pectin_lyase_fold/virulence	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038	tier1	-	-	47	0	0.00	47	11	18.97
PLA2G16	0	genome.wustl.edu	37	11	63365556	63365556	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	63365556	63365556	T	C	SNP	PLA2G16	ENST00000323646	human	ensembl	74_37	-1	known	missense	c.95	p.Y32C	1.000	NULL	pfam_LRAT-like_dom	-	no_errors	PLA2G16	HGNC	ENSG00000176485	tier1	-	-	85	0	0.00	37	23	38.33
PLA2G6	0	genome.wustl.edu	37	22	38541585	38541585	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	38541585	38541585	A	G	SNP	PLA2G6	ENST00000332509	human	ensembl	74_37	-1	known	silent	c.285	p.Y95	0.948	NULL	pfam_Ankyrin_rpt,pfam_Patatin/PLipase_A2-rel,superfamily_Ankyrin_rpt-contain_dom,superfamily_Acyl_Trfase/lysoPLipase,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PLA2G6	HGNC	ENSG00000184381	tier1	-	-	39	0	0.00	21	13	38.24
PLAGL1	0	genome.wustl.edu	37	6	144263029	144263029	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	144263029	144263029	G	A	SNP	PLAGL1	ENST00000354765	human	ensembl	74_37	-1	known	silent	c.924	p.T308	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PLAGL1	HGNC	ENSG00000118495	tier1	-	-	26	0	0.00	10	8	44.44
PLB1	0	genome.wustl.edu	37	2	28788159	28788159	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	28788159	28788159	G	A	SNP	PLB1	ENST00000422425	human	ensembl	74_37	+1	known	missense	c.1252	p.A418T	0.920	pfam_Lipase_GDSL	pfam_Lipase_GDSL	-	no_errors	PLB1	HGNC	ENSG00000163803	tier1	-	-	71	0	0.00	58	4	6.45
PLCB3	0	genome.wustl.edu	37	11	64022235	64022235	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	64022235	64022235	G	A	SNP	PLCB3	ENST00000279230	human	ensembl	74_37	+1	known	missense	c.193	p.D65N	1.000	pirsf_PLC-beta	pirsf_PLC-beta,pfam_PLC-beta_C,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,pfam_PLC-beta_CS,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB3	HGNC	ENSG00000149782	tier1	-	-	40	0	0.00	21	9	30.00
PLCB3	0	genome.wustl.edu	37	11	64031214	64031214	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	64031214	64031214	C	T	SNP	PLCB3	ENST00000279230	human	ensembl	74_37	+1	known	missense	c.2507	p.P836L	1.000	pirsf_PLC-beta,superfamily_C2_dom	pirsf_PLC-beta,pfam_PLC-beta_C,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,pfam_PLC-beta_CS,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB3	HGNC	ENSG00000149782	tier1	rs142407686	-	113	0	0.00	52	24	31.58
PLD3	0	genome.wustl.edu	37	19	40883777	40883777	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	40883777	40883777	C	T	SNP	PLD3	ENST00000356508	human	ensembl	74_37	+1	known	missense	c.1270	p.R424C	0.977	smart_PLipase_D/transphosphatidylase,pfscan_PLipase_D/transphosphatidylase	pfam_PLipase_D/transphosphatidylase,smart_PLipase_D/transphosphatidylase,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD3	HGNC	ENSG00000105223	tier1	rs201893308	-	40	0	0.00	17	9	34.62
PLEC	0	genome.wustl.edu	37	8	144994400	144994400	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	144994400	144994400	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	nonsense	c.10000	p.Q3334*	0.798	NULL	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209				14	0	0.00	10	3	23.08
PLEKHA1	0	genome.wustl.edu	37	10	124152781	124152781	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	124152781	124152781	G	A	SNP	PLEKHA1	ENST00000368990	human	ensembl	74_37	+1	known	missense	c.65	p.S22N	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA1	HGNC	ENSG00000107679	tier1	-	-	84	0	0.00	37	40	51.95
PLEKHA4	0	genome.wustl.edu	37	19	49341300	49341300	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	49341300	49341300	G	A	SNP	PLEKHA4	ENST00000263265	human	ensembl	74_37	-1	known	missense	c.2051	p.A684V	0.964	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA4	HGNC	ENSG00000105559	tier1	-	-	103	0	0.00	68	36	34.62
PLEKHA5	0	genome.wustl.edu	37	12	19501363	19501363	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	19501363	19501363	C	T	SNP	PLEKHA5	ENST00000317589	human	ensembl	74_37	+1	known	missense	c.2620	p.P874S	1.000	NULL	pfam_Pleckstrin_homology,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_WW_dom	-	no_errors	PLEKHA5	HGNC	ENSG00000052126	tier1	-	-	62	0	0.00	42	113	72.90
PLEKHA6	0	genome.wustl.edu	37	1	204228411	204228411	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	204228411	204228411	C	-	DEL	PLEKHA6	ENST00000272203	human	ensembl	74_37	-1	known	frame_shift_del	c.982	p.V328fs	0.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850	tier1			38	0	0.00	26	10	27.78
PLEKHA6	0	genome.wustl.edu	37	1	204228416	204228416	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	204228416	204228416	C	G	SNP	PLEKHA6	ENST00000272203	human	ensembl	74_37	-1	known	missense	c.977	p.R326P	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850				37	0	0.00	36	3	7.69
PLEKHG3	0	genome.wustl.edu	37	14	65194674	65194674	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	65194674	65194674	G	A	SNP	PLEKHG3	ENST00000394691	human	ensembl	74_37	+1	known	missense	c.325	p.V109I	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG3	HGNC	ENSG00000126822	tier1	-	-	52	0	0.00	18	14	43.75
PLEKHM2	0	genome.wustl.edu	37	1	16053915	16053915	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	16053915	16053915	C	T	SNP	PLEKHM2	ENST00000375799	human	ensembl	74_37	+1	known	missense	c.1348	p.P450S	0.000	NULL	pfam_Run,pfam_Pleckstrin_homology,smart_Run,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Run	-	no_errors	PLEKHM2	HGNC	ENSG00000116786	tier1	-	-	31	0	0.00	14	10	41.67
PLIN4	0	genome.wustl.edu	37	19	4511502	4511502	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	4511502	4511502	C	T	SNP	PLIN4	ENST00000301286	human	ensembl	74_37	-1	novel	missense	c.2428	p.V810M	0.006	NULL	pfam_Perilipin,superfamily_Ankyrin_rpt-contain_dom	-	no_errors	PLIN4	HGNC	ENSG00000167676	tier1	rs113169027	-	262	0	0.00	148	50	25.13
PLOD1	0	genome.wustl.edu	37	1	12012719	12012719	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	12012719	12012719	C	T	SNP	PLOD1	ENST00000376369	human	ensembl	74_37	+1	known	missense	c.647	p.A216V	1.000	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD1	HGNC	ENSG00000083444	tier1	-	-	92	0	0.00	44	28	38.89
PLOD2	0	genome.wustl.edu	37	3	145788602	145788602	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	145788602	145788602	A	C	SNP	PLOD2	ENST00000282903	human	ensembl	74_37	-1	known	missense	c.2179	p.W727G	1.000	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD2	HGNC	ENSG00000152952	tier1	-	-	14	0	0.00	15	10	40.00
PLVAP	0	genome.wustl.edu	37	19	17487856	17487856	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	17487856	17487856	T	C	SNP	PLVAP	ENST00000252590	human	ensembl	74_37	-1	known	missense	c.242	p.Q81R	0.000	pfam_PV-1	pfam_PV-1	-	no_errors	PLVAP	HGNC	ENSG00000130300	tier1	-	-	63	0	0.00	42	33	44.00
PLXNA2	0	genome.wustl.edu	37	1	208315787	208315787	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	208315787	208315787	G	-	DEL	PLXNA2	ENST00000367033	human	ensembl	74_37	-1	known	frame_shift_del	c.1393	p.H465fs	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA2	HGNC	ENSG00000076356	tier1			63	0	0.00	60	17	22.08
PLXNB1	0	genome.wustl.edu	37	3	48454262	48454262	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	48454262	48454262	G	A	SNP	PLXNB1	ENST00000296440	human	ensembl	74_37	-1	known	silent	c.4743	p.R1581	0.988	pfam_Plexin_cytoplasmic_RasGAP_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB1	HGNC	ENSG00000164050	tier1	-	-	40	0	0.00	34	16	32.00
PLXNB1	0	genome.wustl.edu	37	3	48465485	48465485	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	48465485	48465485	C	-	DEL	PLXNB1	ENST00000296440	human	ensembl	74_37	-1	known	frame_shift_del	c.536	p.G179fs	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB1	HGNC	ENSG00000164050	tier1			25	0	0.00	7	4	36.36
PLXNB2	0	genome.wustl.edu	37	22	50721802	50721803	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	50721802	50721803	CA	-	DEL	PLXNB2	ENST00000359337	human	ensembl	74_37	-1	known	frame_shift_del	c.2643_2642	p.L881fs	0.009:0.280	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB2	HGNC	ENSG00000196576	tier1			64	0	0.00	24	22	47.83
PLXNB2	0	genome.wustl.edu	37	22	50728029	50728029	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	50728029	50728029	C	T	SNP	PLXNB2	ENST00000359337	human	ensembl	74_37	-1	known	missense	c.985	p.A329T	0.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB2	HGNC	ENSG00000196576	tier1	-	-	75	0	0.00	44	19	30.16
PLXNB3	0	genome.wustl.edu	37	X	153035373	153035373	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	153035373	153035373	C	-	DEL	PLXNB3	ENST00000538966	human	ensembl	74_37	+1	known	frame_shift_del	c.1677	p.R561fs	0.991	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Plexin_repeat,pfam_Semap_dom,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB3	HGNC	ENSG00000198753	tier1			23	0	0.00	3	15	83.33
PLXNC1	0	genome.wustl.edu	37	12	94653484	94653484	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	94653484	94653484	G	T	SNP	PLXNC1	ENST00000258526	human	ensembl	74_37	+1	known	missense	c.3225	p.K1075N	0.996	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Plexin_repeat,pfam_IPT,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Plexin-like_fold,superfamily_Ig_E-set,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNC1	HGNC	ENSG00000136040	tier1	-	-	39	0	0.00	51	4	7.14
PNISR	0	genome.wustl.edu	37	6	99858807	99858807	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	99858807	99858807	G	-	DEL	PNISR	ENST00000369239	human	ensembl	74_37	-1	known	frame_shift_del	c.311	p.P104fs	1.000	NULL	NULL	-	no_errors	PNISR	HGNC	ENSG00000132424	tier1			72	0	0.00	63	35	35.71
PNISR	0	genome.wustl.edu	37	6	99860163	99860163	+	RNA	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	99860163	99860163	A	T	SNP	PNISR	ENST00000466057	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PNISR	HGNC	ENSG00000132424	tier1	-	-	43	0	0.00	14	9	39.13
PNPLA5	0	genome.wustl.edu	37	22	44286964	44286964	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	44286964	44286964	G	T	SNP	PNPLA5	ENST00000216177	human	ensembl	74_37	-1	known	missense	c.404	p.A135D	0.057	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	-	no_errors	PNPLA5	HGNC	ENSG00000100341	tier1	-	-	97	0	0.00	61	4	6.15
PNPLA7	0	genome.wustl.edu	37	9	140356679	140356679	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	140356679	140356679	G	-	DEL	PNPLA7	ENST00000406427	human	ensembl	74_37	-1	known	frame_shift_del	c.3597	p.I1200fs	1.000	superfamily_Acyl_Trfase/lysoPLipase	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA7	HGNC	ENSG00000130653	tier1			85	0	0.00	48	11	18.64
POC5	0	genome.wustl.edu	37	5	74984889	74984889	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	74984889	74984889	T	C	SNP	POC5	ENST00000428202	human	ensembl	74_37	-1	known	silent	c.1077	p.V359	0.024	NULL	NULL	-	no_errors	POC5	HGNC	ENSG00000152359	tier1	-	-	41	0	0.00	30	28	48.28
POGLUT1	0	genome.wustl.edu	37	3	119204182	119204182	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	119204182	119204182	G	A	SNP	POGLUT1	ENST00000295588	human	ensembl	74_37	+1	known	missense	c.586	p.A196T	1.000	pfam_LipoPS_modifying,smart_LipoPS_modifying	pfam_LipoPS_modifying,smart_LipoPS_modifying	-	no_errors	POGLUT1	HGNC	ENSG00000163389				74	0	0.00	76	4	5.00
POLD1	0	genome.wustl.edu	37	19	50919866	50919866	+	Splice_Site	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	50919866	50919866	G	-	DEL	POLD1	ENST00000440232	human	ensembl	74_37	+1	known	splice_site_del	c.2954-1	e23-1	1.000	-	-	-	no_errors	POLD1	HGNC	ENSG00000062822	tier1			13	0	0.00	7	4	36.36
POLE	0	genome.wustl.edu	37	12	133257836	133257836	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	133257836	133257836	G	T	SNP	POLE	ENST00000320574	human	ensembl	74_37	-1	known	missense	c.92	p.A31E	0.999	NULL	pfam_DNA_pol_e_suA_C,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	-	no_errors	POLE	HGNC	ENSG00000177084				27	0	0.00	31	4	11.43
POLQ	0	genome.wustl.edu	37	3	121208121	121208121	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	121208121	121208121	G	T	SNP	POLQ	ENST00000264233	human	ensembl	74_37	-1	known	silent	c.3657	p.P1219	0.244	NULL	pfam_DNA-dir_DNA_pol_A_palm_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_DNA-dir_DNA_pol_A_palm_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_DNA_polymerase_A	-	no_errors	POLQ	HGNC	ENSG00000051341	tier1	-	-	64	0	0.00	37	25	40.32
POLR1A	0	genome.wustl.edu	37	2	86302261	86302261	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	86302261	86302261	G	A	SNP	POLR1A	ENST00000263857	human	ensembl	74_37	-1	known	silent	c.1503	p.D501	0.959	pfam_RNA_pol_asu,smart_RNA_pol_N	pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,pfam_RNA_pol_Rpb1_1,smart_RNA_pol_N	-	no_errors	POLR1A	HGNC	ENSG00000068654	tier1	-	-	140	0	0.00	61	54	46.55
POLR1C	0	genome.wustl.edu	37	6	43488038	43488038	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	43488038	43488038	C	-	DEL	POLR1C	ENST00000372389	human	ensembl	74_37	+1	known	frame_shift_del	c.528	p.L178fs	0.327	pfam_DNA-dir_RNA_pol_insert,pfam_RBP11-like_dimer,superfamily_RBP11-like_dimer,superfamily_DNA-dir_RNA_pol_insert,smart_DNA-dir_RNA_pol_RpoA/D/Rpb3	pfam_DNA-dir_RNA_pol_insert,pfam_RBP11-like_dimer,superfamily_RBP11-like_dimer,superfamily_DNA-dir_RNA_pol_insert,smart_DNA-dir_RNA_pol_RpoA/D/Rpb3	-	no_errors	POLR1C	HGNC	ENSG00000171453	tier1			75	0	0.00	35	13	27.08
POLR1C	0	genome.wustl.edu	37	6	43488730	43488730	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	43488730	43488730	G	T	SNP	POLR1C	ENST00000372389	human	ensembl	74_37	+1	known	missense	c.866	p.R289L	1.000	pfam_RBP11-like_dimer,superfamily_RBP11-like_dimer,smart_DNA-dir_RNA_pol_RpoA/D/Rpb3	pfam_DNA-dir_RNA_pol_insert,pfam_RBP11-like_dimer,superfamily_RBP11-like_dimer,superfamily_DNA-dir_RNA_pol_insert,smart_DNA-dir_RNA_pol_RpoA/D/Rpb3	-	no_errors	POLR1C	HGNC	ENSG00000171453	tier1	-	-	63	0	0.00	70	4	5.41
POLR2K	0	genome.wustl.edu	37	8	101164033	101164033	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	101164033	101164033	T	-	DEL	POLR2K	ENST00000519765	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	POLR2K	HGNC	ENSG00000147669	tier1			29	0	0.00	19	27	58.70
POLR2M	0	genome.wustl.edu	37	15	58001499	58001499	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	58001499	58001499	T	C	SNP	POLR2M	ENST00000299638	human	ensembl	74_37	+1	known	missense	c.701	p.V234A	1.000	NULL	NULL	-	no_errors	POLR2M	HGNC	ENSG00000255529	tier1	-	-	35	0	0.00	29	16	35.56
POLR3B	0	genome.wustl.edu	37	12	106826212	106826213	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	106826212	106826213	-	G	INS	POLR3B	ENST00000228347	human	ensembl	74_37	+1	known	frame_shift_ins	c.1581_1582	p.E528fs	1.000:1.000	NULL	pfam_DNA-dir_RNA_pol_su2_6,pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_7,pfam_RNA_pol_Rpb2_2,pfam_RNA_pol_Rpb2_3,pfam_RNA_pol_Rpb2_4,pfam_RNA_pol_Rpb2_5	-	no_errors	POLR3B	HGNC	ENSG00000013503	tier1			60	0	0.00	43	20	31.75
POM121L9P	0	genome.wustl.edu	37	22	24659571	24659571	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	24659571	24659571	G	A	SNP	POM121L9P	ENST00000414583	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	POM121L9P	HGNC	ENSG00000128262	tier1	-	-	201	0	0.00	98	59	37.34
POMGNT1	0	genome.wustl.edu	37	1	46658080	46658080	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	46658080	46658080	G	A	SNP	POMGNT1	ENST00000371986	human	ensembl	74_37	-1	known	missense	c.1313	p.A438V	0.998	pfam_Glyco_trans_13	pfam_Glyco_trans_13	-	no_errors	POMGNT1	HGNC	ENSG00000085998	tier1	-	-	35	0	0.00	15	9	37.50
PON2	0	genome.wustl.edu	37	7	95045559	95045560	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	95045559	95045560	-	A	INS	PON2	ENST00000536183	human	ensembl	74_37	-1	known	frame_shift_ins	c.259_258	p.S86fs	0.999:0.867	NULL	pfam_Arylesterase,pfam_SGL,prints_Arylesterase,prints_Paraoxonase2	-	no_errors	PON2	HGNC	ENSG00000105854	tier1			59	0	0.00	39	24	38.10
POSTN	0	genome.wustl.edu	37	13	38137448	38137448	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	38137448	38137448	T	-	DEL	POSTN	ENST00000473823	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.032	-	-	-	no_errors	POSTN	HGNC	ENSG00000133110	tier1			40	0	0.00	38	15	28.30
POSTN	0	genome.wustl.edu	37	13	38164539	38164539	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	38164539	38164539	C	T	SNP	POSTN	ENST00000379747	human	ensembl	74_37	-1	known	silent	c.411	p.P137	0.778	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_FAS1_domain	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_EMI_domain,pfscan_FAS1_domain	-	no_errors	POSTN	HGNC	ENSG00000133110	tier1	-	-	38	0	0.00	41	10	19.61
POT1	0	genome.wustl.edu	37	7	124493078	124493078	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	124493078	124493078	G	A	SNP	POT1	ENST00000357628	human	ensembl	74_37	-1	known	missense	c.817	p.R273W	1.000	superfamily_NA-bd_OB-fold	pfam_Telomer_end-bd_POT1/Cdc13,superfamily_NA-bd_OB-fold,smart_Telomer_end-bd_POT1/Cdc13	-	no_errors	POT1	HGNC	ENSG00000128513	tier1	-	-	63	0	0.00	38	23	37.70
POTEE	0	genome.wustl.edu	37	2	131985955	131985955	+	Splice_Site	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	131985955	131985955	G	A	SNP	POTEE	ENST00000356920	human	ensembl	74_37	+1	known	splice_site	c.1055+1	e5+1	0.405	-	-	-	no_errors	POTEE	HGNC	ENSG00000188219	tier1	-	-	173	0	0.00	150	35	18.92
POTEE	0	genome.wustl.edu	37	2	132021787	132021787	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	132021787	132021787	C	A	SNP	POTEE	ENST00000356920	human	ensembl	74_37	+1	known	missense	c.2759	p.A920D	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEE	HGNC	ENSG00000188219	tier1	-	-	215	0	0.00	171	23	11.86
POTEE	0	genome.wustl.edu	37	2	131981607	131981607	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	131981607	131981607	A	0	DEL	POTEE	ENST00000356920	human	ensembl	74_37	+1	known	frame_shift_del	c.801	p.N269fs	0.968	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEE	HGNC	ENSG00000188219				43	0	0.00	22	10	31.25
POTEF	0	genome.wustl.edu	37	2	130868115	130868115	+	Splice_Site	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	130868115	130868115	C	T	SNP	POTEF	ENST00000357462	human	ensembl	74_37	-1	known	splice_site	c.1055+1	e5+1	0.407	-	-	-	no_errors	POTEF	HGNC	ENSG00000196604	tier1	-	-	34	0	0.00	21	11	34.38
POU2F1	0	genome.wustl.edu	37	1	167385179	167385182	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	167385179	167385182	AAAA	-	DEL	POU2F1	ENST00000367865	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.090:0.002:0.000:0.000	-	-	-	no_errors	POU2F1	HGNC	ENSG00000143190	tier1			80	0	0.00	45	39	46.43
POU2F2	0	genome.wustl.edu	37	19	42600367	42600367	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	42600367	42600367	G	A	SNP	POU2F2	ENST00000342301	human	ensembl	74_37	-1	known	missense	c.530	p.P177L	1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU,prints_TF_octamer	-	no_errors	POU2F2	HGNC	ENSG00000028277	tier1	-	-	10	0	0.00	7	4	36.36
POU4F3	0	genome.wustl.edu	37	5	145719656	145719656	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	145719656	145719656	G	A	SNP	POU4F3	ENST00000230732	human	ensembl	74_37	+1	known	silent	c.666	p.S222	0.862	pfam_POU_specific,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,pfscan_POU_specific	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F3	HGNC	ENSG00000091010	tier1	-	-	92	0	0.00	55	32	36.78
PPAP2B	0	genome.wustl.edu	37	1	56978869	56978869	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	56978869	56978869	A	-	DEL	PPAP2B	ENST00000459962	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	PPAP2B	HGNC	ENSG00000162407	tier1			42	0	0.00	20	12	37.50
PPARA	0	genome.wustl.edu	37	22	46614298	46614298	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	46614298	46614298	G	T	SNP	PPARA	ENST00000262735	human	ensembl	74_37	+1	known	missense	c.508	p.A170S	1.000	pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_1Cnucl_rcpt_A,prints_1Cnucl_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	PPARA	HGNC	ENSG00000186951	tier1	-	-	51	0	0.00	28	20	41.67
PPARG	0	genome.wustl.edu	37	3	12434182	12434182	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	12434182	12434182	A	-	DEL	PPARG	ENST00000287820	human	ensembl	74_37	+1	known	frame_shift_del	c.550	p.S186fs	1.000	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_PPARgamma_N,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_1Cnucl_rcpt,prints_1Cnucl_rcpt_G,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	PPARG	HGNC	ENSG00000132170	tier1			82	0	0.00	42	28	40.00
PPID	0	genome.wustl.edu	37	4	159642600	159642600	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	159642600	159642600	C	T	SNP	PPID	ENST00000307720	human	ensembl	74_37	-1	known	missense	c.121	p.V41I	1.000	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPID	HGNC	ENSG00000171497	tier1	-	-	75	0	0.00	67	28	29.47
PPIL4	0	genome.wustl.edu	37	6	149833366	149833366	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	149833366	149833366	T	-	DEL	PPIL4	ENST00000253329	human	ensembl	74_37	-1	known	frame_shift_del	c.1152	p.K384fs	0.998	NULL	pfam_Cyclophilin-like_PPIase_dom,pfam_RRM_dom,superfamily_Cyclophilin-like_PPIase_dom,smart_RRM_dom,pfscan_RRM_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIL4	HGNC	ENSG00000131013	tier1			122	0	0.00	107	42	28.19
PPL	0	genome.wustl.edu	37	16	4935547	4935547	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	4935547	4935547	G	A	SNP	PPL	ENST00000345988	human	ensembl	74_37	-1	known	missense	c.3109	p.R1037C	1.000	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	PPL	HGNC	ENSG00000118898	tier1	-	-	32	0	0.00	17	11	39.29
PPM1K	0	genome.wustl.edu	37	4	89189444	89189444	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	89189444	89189444	C	-	DEL	PPM1K	ENST00000608933	human	ensembl	74_37	-1	known	frame_shift_del	c.750	p.Q251fs	0.984	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1K	HGNC	ENSG00000163644	tier1			70	0	0.00	50	25	33.33
PPM1K	0	genome.wustl.edu	37	4	89189962	89189962	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	89189962	89189962	A	-	DEL	PPM1K	ENST00000608933	human	ensembl	74_37	-1	known	frame_shift_del	c.638	p.L213fs	1.000	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1K	HGNC	ENSG00000163644	tier1			64	0	0.00	55	28	33.73
PPP1R16B	0	genome.wustl.edu	37	20	37529287	37529287	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	37529287	37529287	A	G	SNP	PPP1R16B	ENST00000299824	human	ensembl	74_37	+1	known	silent	c.531	p.E177	1.000	superfamily_Ankyrin_rpt-contain_dom,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R16B	HGNC	ENSG00000101445	tier1	-	-	51	0	0.00	31	21	40.38
PPP1R26	0	genome.wustl.edu	37	9	138378164	138378164	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	138378164	138378164	G	T	SNP	PPP1R26	ENST00000356818	human	ensembl	74_37	+1	known	missense	c.1808	p.R603M	0.000	NULL	NULL	-	no_errors	PPP1R26	HGNC	ENSG00000196422	tier1	-	-	34	0	0.00	16	14	46.67
PPP1R26	0	genome.wustl.edu	37	9	138379511	138379511	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	138379511	138379511	G	-	DEL	PPP1R26	ENST00000356818	human	ensembl	74_37	+1	known	frame_shift_del	c.3155	p.G1054fs	0.000	NULL	NULL	-	no_errors	PPP1R26	HGNC	ENSG00000196422	tier1			15	0	0.00	12	5	29.41
PPP2R3A	0	genome.wustl.edu	37	3	135768155	135768155	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	135768155	135768155	G	T	SNP	PPP2R3A	ENST00000264977	human	ensembl	74_37	+1	known	missense	c.2421	p.K807N	0.987	NULL	pfscan_EF_hand_dom	-	no_errors	PPP2R3A	HGNC	ENSG00000073711	tier1	-	-	47	0	0.00	66	5	7.04
PPP2R3C	0	genome.wustl.edu	37	14	35585935	35585935	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	35585935	35585935	T	-	DEL	PPP2R3C	ENST00000261475	human	ensembl	74_37	-1	known	frame_shift_del	c.67	p.S23fs	1.000	NULL	NULL	-	no_errors	PPP2R3C	HGNC	ENSG00000092020	tier1			41	0	0.00	23	15	39.47
PPP6R2	0	genome.wustl.edu	37	22	50853069	50853069	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	50853069	50853069	G	A	SNP	PPP6R2	ENST00000216061	human	ensembl	74_37	+1	known	missense	c.503	p.R168H	1.000	pfam_SAPS,superfamily_ARM-type_fold	pfam_SAPS,superfamily_ARM-type_fold	-	no_errors	PPP6R2	HGNC	ENSG00000100239	tier1	-	-	71	0	0.00	25	19	43.18
PRB2	0	genome.wustl.edu	37	12	11653896	11653896	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	11653896	11653896	C	-	DEL	PRB2	ENST00000545829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	PRB2	HGNC	ENSG00000121335	tier1			15	0	0.00	10	10	50.00
PRDM15	0	genome.wustl.edu	37	21	43220665	43220665	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	43220665	43220665	A	-	DEL	PRDM15	ENST00000470586	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	PRDM15	HGNC	ENSG00000141956	tier1			12	0	0.00	12	6	33.33
PREX2	0	genome.wustl.edu	37	8	68956723	68956723	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	68956723	68956723	C	T	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	missense	c.841	p.R281W	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889	tier1	-	-	49	0	0.00	73	33	31.13
PRKCDBP	0	genome.wustl.edu	37	11	6340635	6340635	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	6340635	6340635	C	T	SNP	PRKCDBP	ENST00000303927	human	ensembl	74_37	-1	known	missense	c.544	p.G182R	0.654	NULL	NULL	-	no_errors	PRKCDBP	HGNC	ENSG00000170955	tier1	-	-	20	0	0.00	5	7	58.33
PRKCZ	0	genome.wustl.edu	37	1	2116115	2116115	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	2116115	2116115	G	A	SNP	PRKCZ	ENST00000378567	human	ensembl	74_37	+1	known	missense	c.1669	p.V557M	0.996	pfam_Pkinase_C,smart_AGC-kinase_C,pirsf_PKC_zeta	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_PKC_zeta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKCZ	HGNC	ENSG00000067606	tier1	-	-	46	0	0.00	27	25	48.08
PRKD2	0	genome.wustl.edu	37	19	47177940	47177940	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	47177940	47177940	C	T	SNP	PRKD2	ENST00000291281	human	ensembl	74_37	-1	known	missense	c.2477	p.R826Q	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD2	HGNC	ENSG00000105287	tier1	-	-	35	0	0.00	20	14	41.18
PRKDC	0	genome.wustl.edu	37	8	48691161	48691161	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	48691161	48691161	G	A	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	silent	c.11709	p.F3903	0.018	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1	-	-	30	0	0.00	39	6	13.33
PRKDC	0	genome.wustl.edu	37	8	48734354	48734354	+	Splice_Site	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	48734354	48734354	C	A	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	splice_site	c.8920-1	e66-1	1.000	-	-	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1	-	-	54	0	0.00	57	20	25.97
PROB1	0	genome.wustl.edu	37	5	138729809	138729809	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	138729809	138729809	C	T	SNP	PROB1	ENST00000434752	human	ensembl	74_37	-1	known	missense	c.962	p.R321H	1.000	NULL	NULL	-	no_errors	PROB1	HGNC	ENSG00000228672	tier1	-	-	71	0	0.00	31	49	61.25
PRODH	0	genome.wustl.edu	37	22	18918568	18918568	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	18918568	18918568	G	A	SNP	PRODH	ENST00000357068	human	ensembl	74_37	-1	known	silent	c.417	p.S139	1.000	NULL	pfam_Proline_DH	-	no_errors	PRODH	HGNC	ENSG00000100033	tier1	-	-	46	0	0.00	30	17	36.17
PROKR1	0	genome.wustl.edu	37	2	68882356	68882356	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	68882356	68882356	G	A	SNP	PROKR1	ENST00000303786	human	ensembl	74_37	+1	known	missense	c.830	p.R277H	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	PROKR1	HGNC	ENSG00000169618	tier1	-	-	59	0	0.00	31	23	42.59
PROM2	0	genome.wustl.edu	37	2	95947697	95947697	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	95947697	95947697	C	-	DEL	PROM2	ENST00000317620	human	ensembl	74_37	+1	known	frame_shift_del	c.1576	p.P527fs	0.998	pfam_Prominin	pfam_Prominin	-	no_errors	PROM2	HGNC	ENSG00000155066	tier1			93	0	0.00	30	6	16.67
PROSC	0	genome.wustl.edu	37	8	37633479	37633479	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	37633479	37633479	T	C	SNP	PROSC	ENST00000328195	human	ensembl	74_37	+1	known	missense	c.641	p.I214T	0.074	pfam_Ala_racemase_N,pirsf_UPF0001,tigrfam_UPF0001	pfam_Ala_racemase_N,pirsf_UPF0001,tigrfam_UPF0001	-	no_errors	PROSC	HGNC	ENSG00000147471	tier1	-	-	79	0	0.00	79	5	5.95
PROSER1	0	genome.wustl.edu	37	13	39586344	39586344	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	39586344	39586344	C	A	SNP	PROSER1	ENST00000352251	human	ensembl	74_37	-1	known	missense	c.2588	p.G863V	1.000	NULL	NULL	-	no_errors	PROSER1	HGNC	ENSG00000120685	tier1	-	-	19	0	0.00	25	18	41.86
PROZ	0	genome.wustl.edu	37	13	113826331	113826331	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	113826331	113826331	G	T	SNP	PROZ	ENST00000375547	human	ensembl	74_37	+1	known	missense	c.1115	p.G372V	0.000	pirsf_Pept_S1A_FX,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Pept_S1A_FX,pfam_Peptidase_S1,pfam_GLA_domain,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_GLA_domain,smart_GLA_domain,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Peptidase_S1,prints_GLA_domain,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Peptidase_S1	-	no_errors	PROZ	HGNC	ENSG00000126231				65	0	0.00	76	4	5.00
PRR12	0	genome.wustl.edu	37	19	50119416	50119416	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	50119416	50119416	G	-	DEL	PRR12	ENST00000418929	human	ensembl	74_37	+1	novel	frame_shift_del	c.5437	p.G1814fs	0.759	NULL	NULL	-	no_errors	PRR12	HGNC	ENSG00000126464	tier1			64	0	0.00	30	27	47.37
PRR14	0	genome.wustl.edu	37	16	30664143	30664143	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	30664143	30664143	C	T	SNP	PRR14	ENST00000300835	human	ensembl	74_37	+1	known	silent	c.294	p.A98	0.000	NULL	NULL	-	no_errors	PRR14	HGNC	ENSG00000156858	tier1	-	-	115	0	0.00	50	27	35.06
PRR15	0	genome.wustl.edu	37	7	29606191	29606191	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	29606191	29606191	C	T	SNP	PRR15	ENST00000319694	human	ensembl	74_37	+1	known	silent	c.246	p.S82	0.000	NULL	NULL	-	no_errors	PRR15	HGNC	ENSG00000176532	tier1	-	-	25	0	0.00	17	11	39.29
PRR23A	0	genome.wustl.edu	37	3	138724365	138724365	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	138724365	138724365	G	A	SNP	PRR23A	ENST00000383163	human	ensembl	74_37	-1	known	missense	c.746	p.P249L	0.009	pfam_UPF0572	pfam_UPF0572	-	no_errors	PRR23A	HGNC	ENSG00000206260	tier1	-	-	48	0	0.00	24	33	57.89
PRR5L	0	genome.wustl.edu	37	11	36397656	36397656	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	36397656	36397656	T	-	DEL	PRR5L	ENST00000389693	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.023	-	-	-	no_errors	PRR5L	HGNC	ENSG00000135362	tier1			47	0	0.00	38	22	36.67
PRRC2C	0	genome.wustl.edu	37	1	171514769	171514769	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	171514769	171514769	A	-	DEL	PRRC2C	ENST00000392078	human	ensembl	74_37	+1	known	frame_shift_del	c.4915	p.K1640fs	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2C	HGNC	ENSG00000117523	tier1			34	0	0.00	41	12	22.64
PRRT2	0	genome.wustl.edu	37	16	29825042	29825042	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	29825042	29825042	G	A	SNP	PRRT2	ENST00000567659	human	ensembl	74_37	+1	known	missense	c.667	p.V223I	1.000	NULL	pfam_CD225/Dispanin_fam	-	no_errors	PRRT2	HGNC	ENSG00000167371	tier1	-	-	46	0	0.00	31	14	31.11
PRSS3	0	genome.wustl.edu	37	9	33794798	33794799	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	33794798	33794799	GA	-	DEL	PRSS3	ENST00000342836	human	ensembl	74_37	+1	known	frame_shift_del	c.9_10	p.E5fs	0.000:0.001	NULL	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS3	HGNC	ENSG00000010438	tier1			30	0	0.00	28	4	12.50
PRSS36	0	genome.wustl.edu	37	16	31154684	31154684	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	31154684	31154684	G	A	SNP	PRSS36	ENST00000268281	human	ensembl	74_37	-1	known	missense	c.1079	p.A360V	0.992	pirsf_Pept_S1A_polyserase-2,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Pept_S1A_polyserase-2,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	PRSS36	HGNC	ENSG00000178226	tier1	-	-	81	0	0.00	28	25	47.17
PRX	0	genome.wustl.edu	37	19	40901307	40901307	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	40901307	40901307	G	A	SNP	PRX	ENST00000324001	human	ensembl	74_37	-1	known	silent	c.2952	p.G984	0.032	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PRX	HGNC	ENSG00000105227	tier1	-	-	43	0	0.00	11	11	50.00
PSD3	0	genome.wustl.edu	37	8	18490296	18490297	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	18490296	18490297	TT	-	DEL	PSD3	ENST00000440756	human	ensembl	74_37	-1	known	frame_shift_del	c.2243_2242	p.K748fs	1.000:1.000	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom	-	no_errors	PSD3	HGNC	ENSG00000156011	tier1			64	0	0.00	101	21	17.21
PSD4	0	genome.wustl.edu	37	2	113955413	113955413	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	113955413	113955413	C	T	SNP	PSD4	ENST00000245796	human	ensembl	74_37	+1	known	silent	c.2547	p.P849	0.017	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,prints_PH_dom-spectrin-type	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD4	HGNC	ENSG00000125637	tier1	-	-	38	0	0.00	18	13	41.94
PSENEN	0	genome.wustl.edu	37	19	36237526	36237526	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	36237526	36237526	C	T	SNP	PSENEN	ENST00000591949	human	ensembl	74_37	+1	putative	silent	c.268	p.L90	0.000	NULL	pfam_Gamma_Secretase_Asp_P_PEN2	-	no_errors	PSENEN	HGNC	ENSG00000205155	tier1	-	-	51	0	0.00	32	22	40.74
PSMB9	0	genome.wustl.edu	37	6	32827216	32827216	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	32827216	32827216	C	T	SNP	PSMB9	ENST00000374859	human	ensembl	74_37	+1	known	silent	c.567	p.S189	0.998	pfam_Proteasome_sua/b,prints_Pept_T1A_subB	pfam_Proteasome_sua/b,prints_Pept_T1A_subB	-	no_errors	PSMB9	HGNC	ENSG00000240065	tier1	-	-	57	0	0.00	14	49	77.78
PSMC4	0	genome.wustl.edu	37	19	40480653	40480654	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	40480653	40480654	-	CC	INS	PSMC4	ENST00000157812	human	ensembl	74_37	+1	known	frame_shift_ins	c.591_592	p.R199fs	0.585:0.996	superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC4	HGNC	ENSG00000013275	tier1			31	0	0.00	27	6	18.18
PSMD1	0	genome.wustl.edu	37	2	231943429	231943429	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	231943429	231943429	G	T	SNP	PSMD1	ENST00000308696	human	ensembl	74_37	+1	known	missense	c.1128	p.M376I	1.000	superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn2	pfam_Proteasome/cyclosome_rpt,superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn2	-	no_errors	PSMD1	HGNC	ENSG00000173692	tier1	-	-	84	0	0.00	91	5	5.21
PSMD6	0	genome.wustl.edu	37	3	64008326	64008326	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	64008326	64008326	C	T	SNP	PSMD6	ENST00000492933	human	ensembl	74_37	-1	novel	missense	c.297	p.M99I	0.000	NULL	pfam_26S_proteasome_reg_su-Rpn7,pfam_PCI_dom,smart_PCI_dom	-	no_errors	PSMD6	HGNC	ENSG00000163636	tier1	-	-	49	0	0.00	18	13	41.94
PSME4	0	genome.wustl.edu	37	2	54092486	54092487	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	54092486	54092487	AA	-	DEL	PSME4	ENST00000476586	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998:0.999	-	-	-	no_errors	PSME4	HGNC	ENSG00000068878	tier1			29	0	0.00	19	8	29.63
PSORS1C1	0	genome.wustl.edu	37	6	31107581	31107581	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	31107581	31107581	C	T	SNP	PSORS1C1	ENST00000259881	human	ensembl	74_37	+1	known	missense	c.331	p.L111F	0.007	NULL	NULL	-	no_errors	PSORS1C1	HGNC	ENSG00000204540	tier1	-	-	89	0	0.00	56	38	40.43
PSPH	0	genome.wustl.edu	37	7	56079283	56079286	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	56079283	56079286	AAAA	-	DEL	PSPH	ENST00000459834	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.001:0.001:0.001	-	-	-	no_errors	PSPH	HGNC	ENSG00000146733	tier1			24	0	0.00	11	5	31.25
PSPH	0	genome.wustl.edu	37	7	56087302	56087302	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	56087302	56087302	G	T	SNP	PSPH	ENST00000275605	human	ensembl	74_37	-1	known	missense	c.266	p.P89H	0.996	pfam_HAD-like_dom,pfam_Pyrimidine_nucleotidase_eu,pfam_Pase_PHOSPHO-typ,superfamily_HAD-like_dom,tigrfam_SerB,tigrfam_HAD-SF_hydro_IB_PSP-like	pfam_HAD-like_dom,pfam_Pyrimidine_nucleotidase_eu,pfam_Pase_PHOSPHO-typ,superfamily_HAD-like_dom,tigrfam_SerB,tigrfam_HAD-SF_hydro_IB_PSP-like	-	no_errors	PSPH	HGNC	ENSG00000146733	tier1	-	-	60	0	0.00	48	4	7.69
PSTPIP1	0	genome.wustl.edu	37	15	77310871	77310874	+	Frame_Shift_Del	DEL	AAGT	AAGT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAGT	AAGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	77310871	77310874	AAGT	-	DEL	PSTPIP1	ENST00000559785	human	ensembl	74_37	+1	known	frame_shift_del	c.406_407	p.N136fs	1.000:1.000	pfam_FCH_dom,superfamily_Prismane-like,smart_FCH_dom,pfscan_FCH_dom	pfam_FCH_dom,superfamily_Prismane-like,smart_FCH_dom,pfscan_FCH_dom	-	no_errors	PSTPIP1	HGNC	ENSG00000140368	tier1			42	0	0.00	26	9	25.71
PTCH1	0	genome.wustl.edu	37	9	98209585	98209585	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	98209585	98209585	G	A	SNP	PTCH1	ENST00000331920	human	ensembl	74_37	-1	known	missense	c.3953	p.P1318L	1.000	NULL	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH1	HGNC	ENSG00000185920	tier1	-	-	92	0	0.00	48	37	43.02
PTCHD3	0	genome.wustl.edu	37	10	27702455	27702455	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	27702455	27702455	G	A	SNP	PTCHD3	ENST00000438700	human	ensembl	74_37	-1	known	missense	c.725	p.A242V	0.000	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD3	HGNC	ENSG00000182077	tier1	-	-	56	0	0.00	20	16	44.44
PTCHD3	0	genome.wustl.edu	37	10	27702750	27702750	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	27702750	27702750	C	T	SNP	PTCHD3	ENST00000438700	human	ensembl	74_37	-1	known	missense	c.430	p.A144T	0.012	NULL	pfam_Patched,pfscan_SSD	-	no_errors	PTCHD3	HGNC	ENSG00000182077	tier1	-	-	55	0	0.00	16	19	54.29
PTENP1	0	genome.wustl.edu	37	9	33674344	33674347	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	33674344	33674347	TTTT	-	DEL	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.837:0.842:0.847:0.852	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984	tier1			20	0	0.00	19	5	20.83
PTENP1	0	genome.wustl.edu	37	9	33675326	33675326	+	RNA	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	33675326	33675326	T	C	SNP	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984	tier1	-	-	26	0	0.00	25	4	13.79
PTENP1	0	genome.wustl.edu	37	9	33675365	33675365	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	33675365	33675365	A	-	DEL	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984	tier1			34	0	0.00	26	18	40.91
PTENP1	0	genome.wustl.edu	37	9	33675379	33675379	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	33675379	33675379	C	A	SNP	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984	tier1	-	-	41	0	0.00	38	7	15.56
PTENP1	0	genome.wustl.edu	37	9	33675400	33675400	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	33675400	33675400	G	A	SNP	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984	tier1	-	-	51	0	0.00	48	5	9.43
PTGFR	0	genome.wustl.edu	37	1	78959098	78959098	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	78959098	78959098	G	T	SNP	PTGFR	ENST00000370757	human	ensembl	74_37	+1	known	nonsense	c.670	p.G224*	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_PglndnF_rcpt,prints_Prostanoid_rcpt,prints_Thbox_rcpt,prints_GPCR_Rhodpsn	-	no_errors	PTGFR	HGNC	ENSG00000122420				15	0	0.00	35	2	5.41
PTGFRN	0	genome.wustl.edu	37	1	117504097	117504097	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	117504097	117504097	G	T	SNP	PTGFRN	ENST00000393203	human	ensembl	74_37	+1	known	silent	c.1446	p.R482	0.999	smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PTGFRN	HGNC	ENSG00000134247	tier1	-	-	66	0	0.00	37	4	9.76
PTH1R	0	genome.wustl.edu	37	3	46943307	46943307	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	46943307	46943307	C	T	SNP	PTH1R	ENST00000313049	human	ensembl	74_37	+1	known	missense	c.1168	p.R390W	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_parathyroid_rcpt	-	no_errors	PTH1R	HGNC	ENSG00000160801	tier1	rs199627585	-	59	0	0.00	39	16	29.09
PTK2	0	genome.wustl.edu	37	8	141754889	141754891	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	141754889	141754891	AAA	-	DEL	PTK2	ENST00000518509	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.004:0.005	-	-	-	no_errors	PTK2	HGNC	ENSG00000169398	tier1			23	0	0.00	26	7	21.21
PTK2B	0	genome.wustl.edu	37	8	27294938	27294938	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	27294938	27294938	G	A	SNP	PTK2B	ENST00000346049	human	ensembl	74_37	+1	known	silent	c.1452	p.P484	0.091	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Focal_adhesion_kin_target_dom,pfam_Prot_kinase_dom,pfam_FERM_central,superfamily_Kinase-like_dom,superfamily_Focal_adhesion_kin_target_dom,superfamily_FERM_central,smart_Band_41_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_FERM_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PTK2B	HGNC	ENSG00000120899	tier1	-	-	42	0	0.00	33	19	36.54
PTK7	0	genome.wustl.edu	37	6	43098360	43098360	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	43098360	43098360	G	T	SNP	PTK7	ENST00000230419	human	ensembl	74_37	+1	known	missense	c.773	p.W258L	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Immunoglobulin,pfam_Prot_kinase_dom,pfam_Ig_V-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PTK7	HGNC	ENSG00000112655	tier1	-	-	46	0	0.00	40	4	9.09
PTN	0	genome.wustl.edu	37	7	136920962	136920962	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	136920962	136920962	C	T	SNP	PTN	ENST00000393083	human	ensembl	74_37	-1	novel	missense	c.479	p.G160E	0.000	NULL	pfam_PTN/MK_C_dom,pfam_PTN/MK_N_dom,superfamily_PTN/MK_diS,smart_Midkine_heparin-bd_GF,prints_Midkine_heparin-bd_GF	-	no_errors	PTN	HGNC	ENSG00000105894	tier1	-	-	72	0	0.00	54	15	21.74
PTOV1	0	genome.wustl.edu	37	19	50363527	50363527	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	50363527	50363527	G	-	DEL	PTOV1	ENST00000391842	human	ensembl	74_37	+1	known	frame_shift_del	c.1242	p.*417fs	1.000	NULL	pfam_Mediator_Med25	-	no_errors	PTOV1	HGNC	ENSG00000104960	tier1			52	0	0.00	26	13	33.33
PTPN1	0	genome.wustl.edu	37	20	49197838	49197838	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	49197838	49197838	G	-	DEL	PTPN1	ENST00000371621	human	ensembl	74_37	+1	known	frame_shift_del	c.1125	p.G377fs	0.004	pirsf_Ptpn1/Ptpn2	pirsf_Ptpn1/Ptpn2,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN1	HGNC	ENSG00000196396	tier1			48	0	0.00	26	8	23.53
PTPN1	0	genome.wustl.edu	37	20	49197980	49197980	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	49197980	49197980	G	A	SNP	PTPN1	ENST00000371621	human	ensembl	74_37	+1	known	missense	c.1267	p.A423T	1.000	pirsf_Ptpn1/Ptpn2	pirsf_Ptpn1/Ptpn2,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN1	HGNC	ENSG00000196396	tier1	-	-	28	0	0.00	22	9	29.03
PTPN14	0	genome.wustl.edu	37	1	214560191	214560191	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	214560191	214560191	C	T	SNP	PTPN14	ENST00000366956	human	ensembl	74_37	-1	known	silent	c.1062	p.S354	0.007	pirsf_Tyr_Pase_non-rcpt_typ-14/21	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_Dual-sp_phosphatase_cat-dom,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN14	HGNC	ENSG00000152104	tier1	-	-	91	0	0.00	115	20	14.81
PTPN20A	0	genome.wustl.edu	37	10	46584455	46584455	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	46584455	46584455	T	0	DEL	PTPN20A	ENST00000374339	human	ensembl	74_37	-1	known	frame_shift_del	c.560	p.N187fs	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN20A	HGNC	ENSG00000204179				56	0	0.00	60	7	10.45
PTPN6	0	genome.wustl.edu	37	12	7069948	7069948	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	7069948	7069948	C	-	DEL	PTPN6	ENST00000456013	human	ensembl	74_37	+1	known	frame_shift_del	c.1796	p.L601fs	0.004	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_SH2,smart_SH2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_SH2,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_SH2	-	no_errors	PTPN6	HGNC	ENSG00000111679	tier1			44	0	0.00	29	37	56.06
PTPRD	0	genome.wustl.edu	37	9	8449822	8449822	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	8449822	8449822	G	A	SNP	PTPRD	ENST00000356435	human	ensembl	74_37	-1	known	silent	c.3891	p.S1297	0.031	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707	tier1	-	-	141	0	0.00	93	73	43.98
PTPRE	0	genome.wustl.edu	37	10	129877846	129877846	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	129877846	129877846	A	G	SNP	PTPRE	ENST00000254667	human	ensembl	74_37	+1	known	missense	c.1915	p.T639A	0.997	pirsf_Tyr_Pase_rcpt_a/e-type,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Tyr_Pase_rcpt_a/e-type,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRE	HGNC	ENSG00000132334	tier1	-	-	80	0	0.00	55	35	38.89
PTPRM	0	genome.wustl.edu	37	18	8380293	8380293	+	Splice_Site	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	8380293	8380293	G	T	SNP	PTPRM	ENST00000400060	human	ensembl	74_37	+1	known	splice_site	c.3790-1	e29-1	1.000	-	-	-	no_errors	PTPRM	HGNC	ENSG00000173482	tier1	-	-	55	0	0.00	65	4	5.80
PTPRN	0	genome.wustl.edu	37	2	220173969	220173969	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	220173969	220173969	G	A	SNP	PTPRN	ENST00000295718	human	ensembl	74_37	-1	known	missense	c.86	p.P29L	0.991	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Receptor_IA-2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRN	HGNC	ENSG00000054356				22	0	0.00	13	9	40.91
PTPRQ	0	genome.wustl.edu	37	12	80935458	80935458	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	80935458	80935458	G	T	SNP	PTPRQ	ENST00000266688	human	ensembl	74_37	+1	known	missense	c.3267	p.Q1089H	0.994	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRQ	HGNC	ENSG00000139304	tier1	-	-	41	0	0.00	29	4	12.12
PTPRS	0	genome.wustl.edu	37	19	5239054	5239054	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	5239054	5239054	C	T	SNP	PTPRS	ENST00000372412	human	ensembl	74_37	-1	known	silent	c.1728	p.P576	0.008	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom	-	no_errors	PTPRS	HGNC	ENSG00000105426	tier1	-	-	47	0	0.00	32	9	21.95
PTPRT	0	genome.wustl.edu	37	20	40757467	40757467	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	40757467	40757467	T	C	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	missense	c.2831	p.D944G	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090	tier1	-	-	28	0	0.00	13	6	31.58
PTPRT	0	genome.wustl.edu	37	20	41101109	41101109	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	41101109	41101109	C	T	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	missense	c.1247	p.R416H	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090	tier1	-	-	58	0	0.00	29	25	46.30
PTPRU	0	genome.wustl.edu	37	1	29586017	29586017	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	29586017	29586017	G	A	SNP	PTPRU	ENST00000345512	human	ensembl	74_37	+1	known	missense	c.616	p.A206T	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRU	HGNC	ENSG00000060656	tier1	-	-	40	0	0.00	15	10	40.00
PTPRZ1	0	genome.wustl.edu	37	7	121513467	121513468	+	RNA	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	121513467	121513468	-	A	INS	PTPRZ1	ENST00000471837	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	PTPRZ1	HGNC	ENSG00000106278	tier1			28	0	0.00	14	14	50.00
PTRH1	0	genome.wustl.edu	37	9	130477482	130477482	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	130477482	130477482	G	T	SNP	PTRH1	ENST00000416214	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	PTRH1	HGNC	ENSG00000187024	tier1	-	-	54	0	0.00	31	4	11.43
PTRHD1	0	genome.wustl.edu	37	2	25013357	25013357	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	25013357	25013357	C	T	SNP	PTRHD1	ENST00000328379	human	ensembl	74_37	-1	known	missense	c.346	p.A116T	0.236	pfam_PTH2,superfamily_Pep_tRNA_hydro_II_dom	pfam_PTH2,superfamily_Pep_tRNA_hydro_II_dom	-	no_errors	PTRHD1	HGNC	ENSG00000184924	tier1	-	-	110	0	0.00	76	52	40.62
PUF60	0	genome.wustl.edu	37	8	144904053	144904053	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	144904053	144904053	G	T	SNP	PUF60	ENST00000526683	human	ensembl	74_37	-1	known	missense	c.142	p.Q48K	1.000	tigrfam_PolyU-bd	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PolyU-bd	-	no_errors	PUF60	HGNC	ENSG00000179950	tier1	-	-	40	0	0.00	51	4	7.27
PUF60	0	genome.wustl.edu	37	8	144904656	144904656	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	144904656	144904656	C	A	SNP	PUF60	ENST00000524570	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PUF60	HGNC	ENSG00000179950	tier1	-	-	58	0	0.00	50	24	32.43
PVRL1	0	genome.wustl.edu	37	11	119549323	119549323	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	119549323	119549323	C	T	SNP	PVRL1	ENST00000264025	human	ensembl	74_37	-1	known	missense	c.232	p.V78M	1.000	pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PVRL1	HGNC	ENSG00000110400	tier1	-	-	21	0	0.00	15	13	46.43
PXDNL	0	genome.wustl.edu	37	8	52321321	52321321	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	52321321	52321321	G	T	SNP	PXDNL	ENST00000356297	human	ensembl	74_37	-1	known	missense	c.2863	p.L955M	0.997	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,prints_Haem_peroxidase_animal_subgr,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDNL	HGNC	ENSG00000147485	tier1	-	-	58	0	0.00	46	10	17.86
PXDNL	0	genome.wustl.edu	37	8	52321614	52321614	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	52321614	52321614	G	A	SNP	PXDNL	ENST00000356297	human	ensembl	74_37	-1	known	missense	c.2570	p.A857V	0.064	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDNL	HGNC	ENSG00000147485	tier1	-	-	40	0	0.00	15	5	25.00
PXK	0	genome.wustl.edu	37	3	58382896	58382896	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	58382896	58382896	G	A	SNP	PXK	ENST00000356151	human	ensembl	74_37	+1	known	missense	c.953	p.R318Q	0.998	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,pfscan_Prot_kinase_dom	pfam_Phox,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Phox,superfamily_Kinase-like_dom,smart_Phox,pfscan_Phox,pfscan_WH2_dom,pfscan_Prot_kinase_dom	-	no_errors	PXK	HGNC	ENSG00000168297	tier1	-	-	41	0	0.00	23	21	47.73
PYGL	0	genome.wustl.edu	37	14	51387719	51387719	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	51387719	51387719	G	A	SNP	PYGL	ENST00000216392	human	ensembl	74_37	-1	known	missense	c.727	p.R243C	1.000	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGL	HGNC	ENSG00000100504	tier1	-	-	79	0	0.00	30	22	41.51
PYGM	0	genome.wustl.edu	37	11	64525786	64525786	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	64525786	64525786	C	T	SNP	PYGM	ENST00000164139	human	ensembl	74_37	-1	known	missense	c.460	p.A154T	1.000	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGM	HGNC	ENSG00000068976	tier1	-	-	115	0	0.00	72	32	30.77
PYGO2	0	genome.wustl.edu	37	1	154932071	154932071	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	154932071	154932071	G	-	DEL	PYGO2	ENST00000368457	human	ensembl	74_37	-1	known	frame_shift_del	c.405	p.F136fs	0.991	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PYGO2	HGNC	ENSG00000163348	tier1			12	0	0.00	17	4	19.05
PYGO2	0	genome.wustl.edu	37	1	154932071	154932071	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	154932071	154932071	G	A	SNP	PYGO2	ENST00000368457	human	ensembl	74_37	-1	known	silent	c.405	p.P135	0.991	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PYGO2	HGNC	ENSG00000163348				12	0	0.00	15	2	9.52
QRFPR	0	genome.wustl.edu	37	4	122250816	122250816	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	122250816	122250816	C	T	SNP	QRFPR	ENST00000394427	human	ensembl	74_37	-1	known	missense	c.949	p.V317M	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NPFF_rcpt	-	no_errors	QRFPR	HGNC	ENSG00000186867	tier1	-	-	31	0	0.00	18	14	43.75
QRFPR	0	genome.wustl.edu	37	4	122254190	122254190	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	122254190	122254190	C	A	SNP	QRFPR	ENST00000394427	human	ensembl	74_37	-1	known	nonsense	c.583	p.E195*	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NPFF_rcpt	-	no_errors	QRFPR	HGNC	ENSG00000186867	tier1	-	-	36	0	0.00	24	18	42.86
R3HDM2	0	genome.wustl.edu	37	12	57704152	57704152	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	57704152	57704152	T	-	DEL	R3HDM2	ENST00000347140	human	ensembl	74_37	-1	known	frame_shift_del	c.60	p.K20fs	0.985	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	R3HDM2	HGNC	ENSG00000179912	tier1			91	0	0.00	60	44	42.31
R3HDML	0	genome.wustl.edu	37	20	42972026	42972026	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	42972026	42972026	C	T	SNP	R3HDML	ENST00000217043	human	ensembl	74_37	+1	known	silent	c.390	p.S130	0.000	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	-	no_errors	R3HDML	HGNC	ENSG00000101074	tier1	-	-	86	0	0.00	46	28	37.84
RAB11FIP1	0	genome.wustl.edu	37	8	37729770	37729770	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	37729770	37729770	G	A	SNP	RAB11FIP1	ENST00000330843	human	ensembl	74_37	-1	known	silent	c.2550	p.D850	0.000	NULL	pfam_Rab-bd_FIP-RBD,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RAB11FIP1	HGNC	ENSG00000156675	tier1	rs142300397	-	54	0	0.00	50	15	23.08
RAB11FIP5	0	genome.wustl.edu	37	2	73316229	73316229	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	73316229	73316229	C	T	SNP	RAB11FIP5	ENST00000258098	human	ensembl	74_37	-1	known	missense	c.646	p.A216T	0.999	NULL	pfam_Rab-bd_FIP-RBD,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RAB11FIP5	HGNC	ENSG00000135631	tier1	-	-	85	0	0.00	32	18	36.00
RAB36	0	genome.wustl.edu	37	22	23503101	23503101	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	23503101	23503101	G	A	SNP	RAB36	ENST00000263116	human	ensembl	74_37	+1	known	missense	c.853	p.A285T	0.459	pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB36	HGNC	ENSG00000100228	tier1	-	-	59	0	0.00	27	21	43.75
RAB40C	0	genome.wustl.edu	37	16	677355	677355	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	677355	677355	G	T	SNP	RAB40C	ENST00000248139	human	ensembl	74_37	+1	known	missense	c.579	p.Q193H	1.000	pfam_SOCS_C,superfamily_P-loop_NTPase,smart_Ran_GTPase,smart_SOCS_C,pfscan_SOCS_C	pfam_Small_GTPase,pfam_MIRO-like,pfam_SOCS_C,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,smart_SOCS_C,pfscan_SOCS_C,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB40C	HGNC	ENSG00000197562				53	0	0.00	42	5	10.64
RAB6C	0	genome.wustl.edu	37	2	130738037	130738037	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	130738037	130738037	A	G	SNP	RAB6C	ENST00000410061	human	ensembl	74_37	+1	known	missense	c.349	p.S117G	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB6C	HGNC	ENSG00000222014	tier1	-	-	127	0	0.00	100	6	5.66
RABEP1	0	genome.wustl.edu	37	17	5239900	5239900	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	5239900	5239900	T	-	DEL	RABEP1	ENST00000570487	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RABEP1	HGNC	ENSG00000029725	tier1			8	0	0.00	6	4	40.00
RABGAP1	0	genome.wustl.edu	37	9	125827753	125827754	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	125827753	125827754	AA	-	DEL	RABGAP1	ENST00000456584	human	ensembl	74_37	+1	known	frame_shift_del	c.1717_1718	p.K576fs	0.000:0.000	pfscan_Rab-GTPase-TBC_dom	pfam_Kinesin-like,pfam_Rab-GTPase-TBC_dom,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1	HGNC	ENSG00000011454	tier1			30	0	0.00	24	13	35.14
RABGAP1	0	genome.wustl.edu	37	9	125865461	125865461	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	125865461	125865461	C	T	SNP	RABGAP1	ENST00000373647	human	ensembl	74_37	+1	known	missense	c.3179	p.A1060V	1.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_Kinesin-like,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1	HGNC	ENSG00000011454	tier1	-	-	67	0	0.00	54	24	30.77
RABL2A	0	genome.wustl.edu	37	2	114400756	114400756	+	RNA	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	114400756	114400756	T	C	SNP	RABL2A	ENST00000478880	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RABL2A	HGNC	ENSG00000144134	tier1	-	-	122	0	0.00	81	6	5.26
RAD50	0	genome.wustl.edu	37	5	131931452	131931452	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	131931452	131931452	A	-	DEL	RAD50	ENST00000265335	human	ensembl	74_37	+1	known	frame_shift_del	c.2157	p.K722fs	0.997	superfamily_P-loop_NTPase,superfamily_Prefoldin,pfscan_Zn_hook_Rad50,tigrfam_Rad50_eukaryotes	pfam_Rad50_Zn_hook,superfamily_P-loop_NTPase,superfamily_Prefoldin,pfscan_Zn_hook_Rad50,tigrfam_Rad50_eukaryotes	-	no_errors	RAD50	HGNC	ENSG00000113522	tier1			21	0	0.00	20	5	20.00
RAD50	0	genome.wustl.edu	37	5	131944382	131944382	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	131944382	131944382	A	-	DEL	RAD50	ENST00000265335	human	ensembl	74_37	+1	known	frame_shift_del	c.2794	p.N934fs	1.000	superfamily_P-loop_NTPase,tigrfam_Rad50_eukaryotes	pfam_Rad50_Zn_hook,superfamily_P-loop_NTPase,superfamily_Prefoldin,pfscan_Zn_hook_Rad50,tigrfam_Rad50_eukaryotes	-	no_errors	RAD50	HGNC	ENSG00000113522	tier1			61	0	0.00	42	23	35.38
RAD51AP2	0	genome.wustl.edu	37	2	17698736	17698737	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	17698736	17698737	-	T	INS	RAD51AP2	ENST00000399080	human	ensembl	74_37	-1	known	frame_shift_ins	c.947_946	p.T316fs	0.000:0.003	NULL	NULL	-	no_errors	RAD51AP2	HGNC	ENSG00000214842	tier1			102	0	0.00	71	33	31.73
RAD54L2	0	genome.wustl.edu	37	3	51679780	51679780	+	Splice_Site	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	51679780	51679780	G	T	SNP	RAD54L2	ENST00000409535	human	ensembl	74_37	+1	known	splice_site	c.2829+1	e16+1	1.000	-	-	-	no_errors	RAD54L2	HGNC	ENSG00000164080				66	0	0.00	64	4	5.88
RAE1	0	genome.wustl.edu	37	20	55929119	55929119	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	55929119	55929119	G	T	SNP	RAE1	ENST00000371242	human	ensembl	74_37	+1	known	missense	c.25	p.G9C	0.998	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RAE1	HGNC	ENSG00000101146	tier1	-	-	83	0	0.00	66	4	5.71
RAI1	0	genome.wustl.edu	37	17	17696716	17696716	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	17696716	17696716	C	-	DEL	RAI1	ENST00000353383	human	ensembl	74_37	+1	known	frame_shift_del	c.454	p.S154fs	1.000	NULL	smart_Znf_PHD	-	no_errors	RAI1	HGNC	ENSG00000108557	tier1			53	0	0.00	22	12	35.29
RALA	0	genome.wustl.edu	37	7	39745766	39745766	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	39745766	39745766	A	G	SNP	RALA	ENST00000005257	human	ensembl	74_37	+1	known	silent	c.543	p.E181	1.000	superfamily_P-loop_NTPase,smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RALA	HGNC	ENSG00000006451	tier1	-	-	13	0	0.00	13	7	35.00
RALGAPA1	0	genome.wustl.edu	37	14	36041863	36041863	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	36041863	36041863	C	T	SNP	RALGAPA1	ENST00000258840	human	ensembl	74_37	-1	known	missense	c.5894	p.R1965K	1.000	pfam_Rap_GAP_dom,pfscan_Rap_GAP_dom	pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom	-	no_errors	RALGAPA1	HGNC	ENSG00000174373	tier1	-	-	89	0	0.00	68	45	39.82
RAN	0	genome.wustl.edu	37	12	131357571	131357571	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	131357571	131357571	C	A	SNP	RAN	ENST00000392369	human	ensembl	74_37	+1	known	missense	c.145	p.P49T	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAN	HGNC	ENSG00000132341	tier1	-	-	64	0	0.00	41	27	39.71
RAN	0	genome.wustl.edu	37	12	131357587	131357587	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	131357587	131357587	C	A	SNP	RAN	ENST00000392369	human	ensembl	74_37	+1	known	missense	c.161	p.T54N	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAN	HGNC	ENSG00000132341				70	0	0.00	54	3	5.26
RANBP17	0	genome.wustl.edu	37	5	170319432	170319432	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	170319432	170319432	G	T	SNP	RANBP17	ENST00000523189	human	ensembl	74_37	+1	known	missense	c.298	p.A100S	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	RANBP17	HGNC	ENSG00000204764	tier1	-	-	59	0	0.00	67	4	5.63
RANBP2	0	genome.wustl.edu	37	2	109371641	109371641	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	109371641	109371641	A	G	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	missense	c.2392	p.K798E	1.000	NULL	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201	tier1	-	-	273	0	0.00	344	38	9.95
RANBP2	0	genome.wustl.edu	37	2	109368085	109368085	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	109368085	109368085	G	A	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	silent	c.1557	p.V519	0.942	NULL	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201				92	0	0.00	98	14	12.50
RANGAP1	0	genome.wustl.edu	37	22	41677046	41677046	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	41677046	41677046	C	A	SNP	RANGAP1	ENST00000356244	human	ensembl	74_37	-1	known	missense	c.3	p.M1I	1.000	NULL	pfam_Ran_GTPase_activating_1_C,superfamily_Ran_GTPase_activating_1_C,smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	RANGAP1	HGNC	ENSG00000100401	tier1	-	-	37	0	0.00	26	17	39.53
RAPGEF1	0	genome.wustl.edu	37	9	134464198	134464198	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	134464198	134464198	C	-	DEL	RAPGEF1	ENST00000372190	human	ensembl	74_37	-1	known	frame_shift_del	c.2539	p.V847fs	0.997	superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF1	HGNC	ENSG00000107263	tier1			162	0	0.00	60	49	44.95
RAPGEF1	0	genome.wustl.edu	37	9	134504583	134504583	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	134504583	134504583	T	C	SNP	RAPGEF1	ENST00000372190	human	ensembl	74_37	-1	known	missense	c.802	p.M268V	0.008	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF1	HGNC	ENSG00000107263	tier1	-	-	120	0	0.00	80	32	28.57
RARG	0	genome.wustl.edu	37	12	53613976	53613977	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	53613976	53613977	-	G	INS	RARG	ENST00000543726	human	ensembl	74_37	-1	known	frame_shift_ins	c.25_24	p.C8fs	0.999:1.000	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Retinoic_acid_rcpt,prints_Str_hrmn_rcpt,prints_Nuc_orph_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoid-X_rcpt/HNF4	-	no_errors	RARG	HGNC	ENSG00000172819	tier1			49	0	0.00	29	10	25.64
RASGRF1	0	genome.wustl.edu	37	15	79292168	79292168	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	79292168	79292168	G	T	SNP	RASGRF1	ENST00000419573	human	ensembl	74_37	-1	known	missense	c.2711	p.S904Y	0.998	pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_Ras_GEF_dom,superfamily_DH-domain,smart_Pleckstrin_homology,smart_DH-domain,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRF1	HGNC	ENSG00000058335	tier1	-	-	85	0	0.00	71	4	5.33
RASIP1	0	genome.wustl.edu	37	19	49238616	49238616	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	49238616	49238616	T	C	SNP	RASIP1	ENST00000222145	human	ensembl	74_37	-1	known	missense	c.1016	p.Q339R	1.000	NULL	pfam_Dil_domain,pfam_Ras-assoc,superfamily_SMAD_FHA_domain,smart_Ras-assoc,pfscan_Dilute,pfscan_Ras-assoc	-	no_errors	RASIP1	HGNC	ENSG00000105538	tier1	-	-	102	0	0.00	44	23	34.33
RASL10B	0	genome.wustl.edu	37	17	34067487	34067487	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	34067487	34067487	C	T	SNP	RASL10B	ENST00000268864	human	ensembl	74_37	+1	known	silent	c.276	p.Y92	1.000	pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type	pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,prints_Small_GTPase	-	no_errors	RASL10B	HGNC	ENSG00000141150	tier1	-	-	99	0	0.00	52	45	46.39
RASSF2	0	genome.wustl.edu	37	20	4771179	4771179	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	4771179	4771179	C	T	SNP	RASSF2	ENST00000379376	human	ensembl	74_37	-1	known	missense	c.455	p.R152H	1.000	NULL	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SARAH_dom	-	no_errors	RASSF2	HGNC	ENSG00000101265	tier1	-	-	17	0	0.00	7	9	56.25
RAVER1	0	genome.wustl.edu	37	19	10434093	10434093	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	10434093	10434093	G	-	DEL	RAVER1	ENST00000293677	human	ensembl	74_37	-1	known	frame_shift_del	c.957	p.G320fs	0.211	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RAVER1	HGNC	ENSG00000161847	tier1			35	0	0.00	13	10	43.48
RB1	0	genome.wustl.edu	37	13	48916753	48916753	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	48916753	48916753	A	-	DEL	RB1	ENST00000267163	human	ensembl	74_37	+1	known	frame_shift_del	c.283	p.K96fs	1.000	superfamily_Cyclin-like	pfam_RB_C,pfam_RB_A,pfam_RB_B,pfam_RB_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	RB1	HGNC	ENSG00000139687	tier1			63	0	0.00	53	47	47.00
RB1	0	genome.wustl.edu	37	13	48955496	48955496	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	48955496	48955496	G	T	SNP	RB1	ENST00000267163	human	ensembl	74_37	+1	known	missense	c.1612	p.A538S	1.000	pfam_RB_A,superfamily_Cyclin-like	pfam_RB_C,pfam_RB_A,pfam_RB_B,pfam_RB_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	RB1	HGNC	ENSG00000139687	tier1	-	-	30	0	0.00	61	5	7.58
RB1	0	genome.wustl.edu	37	13	48916752	48916752	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	48916752	48916752	G	A	SNP	RB1	ENST00000267163	human	ensembl	74_37	+1	known	silent	c.282	p.K94	1.000	superfamily_Cyclin-like	pfam_RB_C,pfam_RB_A,pfam_RB_B,pfam_RB_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	RB1	HGNC	ENSG00000139687				62	0	0.00	90	7	7.07
RBBP6	0	genome.wustl.edu	37	16	24578711	24578711	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	24578711	24578711	A	G	SNP	RBBP6	ENST00000319715	human	ensembl	74_37	+1	known	missense	c.1837	p.T613A	0.406	NULL	pfam_DWNN_domain,pfam_Ubox_domain,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_CCHC	-	no_errors	RBBP6	HGNC	ENSG00000122257	tier1	-	-	46	0	0.00	24	16	40.00
RBBP8	0	genome.wustl.edu	37	18	20596862	20596862	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	20596862	20596862	G	T	SNP	RBBP8	ENST00000327155	human	ensembl	74_37	+1	known	missense	c.2429	p.G810V	1.000	pfam_DNA-repair_Sae2/CtIP	pfam_CtIP_N,pfam_DNA-repair_Sae2/CtIP	-	no_errors	RBBP8	HGNC	ENSG00000101773				37	0	0.00	29	2	6.45
RBM24	0	genome.wustl.edu	37	6	17292449	17292449	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	17292449	17292449	A	-	DEL	RBM24	ENST00000508508	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.915	-	-	-	no_errors	RBM24	HGNC	ENSG00000112183	tier1			12	0	0.00	7	6	46.15
RBM27	0	genome.wustl.edu	37	5	145583379	145583379	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	145583379	145583379	G	T	SNP	RBM27	ENST00000265271	human	ensembl	74_37	+1	known	silent	c.51	p.L17	1.000	pfam_PWI_dom	pfam_PWI_dom,pfam_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM27	HGNC	ENSG00000091009	tier1	-	-	48	0	0.00	17	3	15.00
RBM27	0	genome.wustl.edu	37	5	145647320	145647320	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	145647320	145647320	A	-	DEL	RBM27	ENST00000265271	human	ensembl	74_37	+1	known	frame_shift_del	c.2440	p.K816fs	1.000	NULL	pfam_PWI_dom,pfam_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM27	HGNC	ENSG00000091009	tier1			31	0	0.00	27	17	38.64
RBM46	0	genome.wustl.edu	37	4	155749056	155749056	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	155749056	155749056	C	-	DEL	RBM46	ENST00000281722	human	ensembl	74_37	+1	known	frame_shift_del	c.1439	p.P481fs	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	-	no_errors	RBM46	HGNC	ENSG00000151962	tier1			53	0	0.00	31	14	31.11
RBM47	0	genome.wustl.edu	37	4	40434715	40434715	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	40434715	40434715	C	T	SNP	RBM47	ENST00000295971	human	ensembl	74_37	-1	known	missense	c.1495	p.A499T	0.953	tigrfam_HnRNP_R/Q_splicing_fac	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	-	no_errors	RBM47	HGNC	ENSG00000163694	tier1	-	-	59	0	0.00	37	27	42.19
RBM48	0	genome.wustl.edu	37	7	92164373	92164373	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	92164373	92164373	T	-	DEL	RBM48	ENST00000481551	human	ensembl	74_37	+1	novel	frame_shift_del	c.1106	p.H372fs	0.000	NULL	NULL	-	no_errors	RBM48	HGNC	ENSG00000127993	tier1			70	0	0.00	54	6	10.00
RBM6	0	genome.wustl.edu	37	3	50005144	50005145	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	50005144	50005145	-	G	INS	RBM6	ENST00000266022	human	ensembl	74_37	+1	known	frame_shift_ins	c.286_287	p.D99fs	1.000:1.000	NULL	pfam_G_patch_dom,smart_RRM_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM6	HGNC	ENSG00000004534	tier1			31	0	0.00	23	8	25.81
RBM6	0	genome.wustl.edu	37	3	50099450	50099450	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	50099450	50099450	A	-	DEL	RBM6	ENST00000266022	human	ensembl	74_37	+1	known	frame_shift_del	c.2495	p.K834fs	1.000	NULL	pfam_G_patch_dom,smart_RRM_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM6	HGNC	ENSG00000004534	tier1			40	0	0.00	29	14	32.56
RBMS1	0	genome.wustl.edu	37	2	161131038	161131039	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	161131038	161131039	TT	-	DEL	RBMS1	ENST00000474820	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.037:0.044	-	-	-	no_errors	RBMS1	HGNC	ENSG00000153250	tier1			36	0	0.00	42	14	25.00
RBMXL1	0	genome.wustl.edu	37	1	89449509	89449510	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	89449509	89449510	TT	-	DEL	RBMXL1	ENST00000321792	human	ensembl	74_37	-1	known	frame_shift_del	c.1	p.M1fs	0.986	NULL	pfam_RRM_dom,pfam_RBM1CTR,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMXL1	HGNC	ENSG00000213516	tier1			51	0	0.00	25	32	56.14
RC3H2	0	genome.wustl.edu	37	9	125621075	125621075	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	125621075	125621075	G	T	SNP	RC3H2	ENST00000357244	human	ensembl	74_37	-1	known	missense	c.2156	p.P719Q	1.000	NULL	pfam_Znf_CCCH,smart_Znf_RING,smart_Znf_CCCH,pfscan_Znf_RING	-	no_errors	RC3H2	HGNC	ENSG00000056586	tier1	-	-	62	0	0.00	42	4	8.70
RC3H2	0	genome.wustl.edu	37	9	125621243	125621243	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	125621243	125621243	G	T	SNP	RC3H2	ENST00000357244	human	ensembl	74_37	-1	known	missense	c.1988	p.P663H	1.000	NULL	pfam_Znf_CCCH,smart_Znf_RING,smart_Znf_CCCH,pfscan_Znf_RING	-	no_errors	RC3H2	HGNC	ENSG00000056586	tier1	-	-	55	0	0.00	45	4	8.16
RC3H2	0	genome.wustl.edu	37	9	125659702	125659702	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	125659702	125659702	G	T	SNP	RC3H2	ENST00000357244	human	ensembl	74_37	-1	known	silent	c.87	p.I29	1.000	smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_CCCH,smart_Znf_RING,smart_Znf_CCCH,pfscan_Znf_RING	-	no_errors	RC3H2	HGNC	ENSG00000056586	tier1	-	-	51	0	0.00	68	4	5.56
RCBTB2	0	genome.wustl.edu	37	13	49085916	49085916	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	49085916	49085916	C	T	SNP	RCBTB2	ENST00000430805	human	ensembl	74_37	-1	known	missense	c.788	p.R263H	0.980	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,pfam_BTB_POZ,superfamily_RCC1/BLIP-II,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RCBTB2	HGNC	ENSG00000136161	tier1	-	-	40	0	0.00	46	22	32.35
RCSD1	0	genome.wustl.edu	37	1	167653202	167653202	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	167653202	167653202	C	T	SNP	RCSD1	ENST00000367854	human	ensembl	74_37	+1	known	silent	c.72	p.A24	0.042	NULL	pfam_RCSD	-	no_errors	RCSD1	HGNC	ENSG00000198771	tier1	-	-	57	0	0.00	72	17	19.10
RCSD1	0	genome.wustl.edu	37	1	167654702	167654702	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	167654702	167654702	C	-	DEL	RCSD1	ENST00000367854	human	ensembl	74_37	+1	known	frame_shift_del	c.153	p.L53fs	0.994	NULL	pfam_RCSD	-	no_errors	RCSD1	HGNC	ENSG00000198771	tier1			51	0	0.00	54	19	26.03
RCVRN	0	genome.wustl.edu	37	17	9801324	9801325	+	RNA	INS	-	-	GT			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	9801324	9801325	-	GT	INS	RCVRN	ENST00000570909	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RCVRN	HGNC	ENSG00000109047	tier1			52	0	0.00	34	5	12.82
RDH11	0	genome.wustl.edu	37	14	68157945	68157945	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	68157945	68157945	G	A	SNP	RDH11	ENST00000381346	human	ensembl	74_37	-1	known	silent	c.366	p.H122	1.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_Epimerase_deHydtase,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_Epimerase_deHydtase,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	RDH11	HGNC	ENSG00000072042	tier1	-	-	45	0	0.00	32	10	23.81
RDH13	0	genome.wustl.edu	37	19	55570534	55570534	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	55570534	55570534	C	T	SNP	RDH13	ENST00000415061	human	ensembl	74_37	-1	known	missense	c.175	p.A59T	1.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_Epimerase_deHydtase	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_Epimerase_deHydtase,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	RDH13	HGNC	ENSG00000160439	tier1	-	-	44	0	0.00	23	25	52.08
REC8	0	genome.wustl.edu	37	14	24642145	24642145	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	24642145	24642145	C	-	DEL	REC8	ENST00000311457	human	ensembl	74_37	+1	known	frame_shift_del	c.163	p.P56fs	0.808	pfam_Rad21_Rec8_N	pfam_Rad21_Rec8_N,pfam_Rad21/Rec8_C_eu	-	no_errors	REC8	HGNC	ENSG00000100918	tier1			35	0	0.00	22	3	12.00
RECK	0	genome.wustl.edu	37	9	36112461	36112461	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	36112461	36112461	A	-	DEL	RECK	ENST00000377966	human	ensembl	74_37	+1	known	frame_shift_del	c.2048	p.N685fs	0.002	NULL	pfam_Kazal_dom,superfamily_Prot_inh_PMP,smart_Kazal_dom	-	no_errors	RECK	HGNC	ENSG00000122707	tier1			86	0	0.00	36	32	47.06
RENBP	0	genome.wustl.edu	37	X	153209096	153209096	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	153209096	153209096	C	T	SNP	RENBP	ENST00000393700	human	ensembl	74_37	-1	known	missense	c.364	p.G122S	1.000	pfam_AGE/RnBP,superfamily_6-hairpin_glycosidase-like	pfam_AGE/RnBP,superfamily_6-hairpin_glycosidase-like	-	no_errors	RENBP	HGNC	ENSG00000102032	tier1	-	-	31	0	0.00	3	14	82.35
RESP18	0	genome.wustl.edu	37	2	220197269	220197269	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	220197269	220197269	C	-	DEL	RESP18	ENST00000333527	human	ensembl	74_37	-1	putative	frame_shift_del	c.209	p.G70fs	0.055	NULL	NULL	-	no_errors	RESP18	HGNC	ENSG00000182698	tier1			62	0	0.00	26	17	39.53
RET	0	genome.wustl.edu	37	10	43600486	43600486	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	43600486	43600486	G	A	SNP	RET	ENST00000355710	human	ensembl	74_37	+1	known	missense	c.712	p.E238K	0.319	pirsf_Tyr_kinase_Ret_rcpt,pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pirsf_Tyr_kinase_Ret_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Cadherin,superfamily_Kinase-like_dom,superfamily_Cadherin-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Cadherin	-	no_errors	RET	HGNC	ENSG00000165731	tier1	-	-	58	0	0.00	28	19	40.43
REV3L	0	genome.wustl.edu	37	6	111710326	111710326	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	111710326	111710326	C	T	SNP	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	missense	c.845	p.S282N	0.305	superfamily_RNaseH-like_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413	tier1	-	-	82	0	0.00	85	8	8.60
REXO2	0	genome.wustl.edu	37	11	114320750	114320750	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	114320750	114320750	T	-	DEL	REXO2	ENST00000544507	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	REXO2	HGNC	ENSG00000076043	tier1			36	0	0.00	38	20	34.48
RFX2	0	genome.wustl.edu	37	19	6010242	6010242	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	6010242	6010242	G	A	SNP	RFX2	ENST00000303657	human	ensembl	74_37	-1	known	missense	c.920	p.T307M	0.999	NULL	pfam_RFX1_trans_act,pfam_DNA-bd_RFX	-	no_errors	RFX2	HGNC	ENSG00000087903	tier1	-	-	84	0	0.00	64	56	46.28
RGS12	0	genome.wustl.edu	37	4	3432431	3432431	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	3432431	3432431	C	-	DEL	RGS12	ENST00000344733	human	ensembl	74_37	+1	known	frame_shift_del	c.3863	p.1292fs	0.000	NULL	pfam_Raf-like_ras-bd,pfam_RGS_dom,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTB/PI_dom,smart_Regulat_G_prot_signal_superfam,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTB/PI_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS12	HGNC	ENSG00000159788	tier1			28	0	0.00	9	6	40.00
RGS3	0	genome.wustl.edu	37	9	116276828	116276828	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	116276828	116276828	G	A	SNP	RGS3	ENST00000350696	human	ensembl	74_37	+1	known	missense	c.1568	p.G523E	0.796	NULL	pfam_RGS_dom,pfam_C2_dom,pfam_PDZ,superfamily_Regulat_G_prot_signal_superfam,superfamily_C2_dom,superfamily_PDZ,smart_C2_dom,smart_PDZ,smart_Regulat_G_prot_signal_superfam,pfscan_C2_dom,pfscan_PDZ,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS3	HGNC	ENSG00000138835	tier1	-	-	30	0	0.00	11	11	50.00
RGS9BP	0	genome.wustl.edu	37	19	33167776	33167777	+	Frame_Shift_Del	DEL	GG	GG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	33167776	33167777	GG	-	DEL	RGS9BP	ENST00000334176	human	ensembl	74_37	+1	known	frame_shift_del	c.607_608	p.G205fs	0.000:0.000	NULL	NULL	-	no_errors	RGS9BP	HGNC	ENSG00000186326	tier1			17	0	0.00	3	3	50.00
RGSL1	0	genome.wustl.edu	37	1	182440500	182440500	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	182440500	182440500	T	C	SNP	RGSL1	ENST00000443996	human	ensembl	74_37	+1	known	missense	c.385	p.S129P	0.552	superfamily_Regulat_G_prot_signal_superfam	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam	-	no_errors	RGSL1	HGNC	ENSG00000121446	tier1	-	-	126	0	0.00	111	42	27.45
RHOBTB1	0	genome.wustl.edu	37	10	62645896	62645897	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	62645896	62645897	-	C	INS	RHOBTB1	ENST00000337910	human	ensembl	74_37	-1	known	frame_shift_ins	c.1549_1548	p.S516fs	1.000:0.995	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,superfamily_BTB/POZ_fold,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_BTB/POZ-like,pfscan_BTB/POZ-like,prints_Small_GTPase	-	no_errors	RHOBTB1	HGNC	ENSG00000072422	tier1			89	0	0.00	60	26	30.23
RIC3	0	genome.wustl.edu	37	11	8161539	8161539	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	8161539	8161539	A	-	DEL	RIC3	ENST00000309737	human	ensembl	74_37	-1	known	frame_shift_del	c.326	p.L109fs	1.000	NULL	NULL	-	no_errors	RIC3	HGNC	ENSG00000166405	tier1			53	0	0.00	47	22	31.88
RICTOR	0	genome.wustl.edu	37	5	38949530	38949530	+	Splice_Site	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	38949530	38949530	C	T	SNP	RICTOR	ENST00000296782	human	ensembl	74_37	-1	known	splice_site	c.4137-1	e32-1	1.000	-	-	-	no_errors	RICTOR	HGNC	ENSG00000164327	tier1	-	-	66	0	0.00	138	16	10.39
RICTOR	0	genome.wustl.edu	37	5	38953112	38953113	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	38953112	38953113	-	T	INS	RICTOR	ENST00000296782	human	ensembl	74_37	-1	known	frame_shift_ins	c.2872_2871	p.Q957fs	1.000:1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	RICTOR	HGNC	ENSG00000164327	tier1			56	0	0.00	43	62	59.05
RICTOR	0	genome.wustl.edu	37	5	38954826	38954826	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	38954826	38954826	T	-	DEL	RICTOR	ENST00000503698	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RICTOR	HGNC	ENSG00000164327	tier1			29	0	0.00	32	22	40.74
RIMBP2	0	genome.wustl.edu	37	12	130892306	130892306	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	130892306	130892306	C	T	SNP	RIMBP2	ENST00000261655	human	ensembl	74_37	-1	known	missense	c.2890	p.D964N	1.000	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709	tier1	-	-	174	0	0.00	94	77	45.03
RIMBP3	0	genome.wustl.edu	37	22	20456704	20456704	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	20456704	20456704	G	A	SNP	RIMBP3	ENST00000426804	human	ensembl	74_37	-1	known	missense	c.4598	p.A1533V	0.000	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	RIMBP3	HGNC	ENSG00000196622	tier1	-	-	68	0	0.00	27	39	59.09
RIMS1	0	genome.wustl.edu	37	6	73111346	73111347	+	RNA	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	73111346	73111347	-	A	INS	RIMS1	ENST00000431478	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	RIMS1	HGNC	ENSG00000079841	tier1			24	0	0.00	5	10	66.67
RIN2	0	genome.wustl.edu	37	20	19956393	19956394	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	19956393	19956394	-	C	INS	RIN2	ENST00000255006	human	ensembl	74_37	+1	known	frame_shift_ins	c.1871_1872	p.I627fs	1.000:0.882	NULL	pfam_VPS9,pfam_Ras-assoc,smart_VPS9_subgr,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SH2,pfscan_VPS9	-	no_errors	RIN2	HGNC	ENSG00000132669	tier1			22	0	0.00	17	7	29.17
RIN2	0	genome.wustl.edu	37	20	19981678	19981678	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	19981678	19981678	C	T	SNP	RIN2	ENST00000484638	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RIN2	HGNC	ENSG00000132669	tier1	-	-	11	0	0.00	6	4	40.00
RN7SL417P	0	genome.wustl.edu	37	15	84948894	84948894	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	84948894	84948894	C	A	SNP	RN7SL417P	ENST00000459938	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	RN7SL417P	HGNC	ENSG00000244056	tier1	-	-	46	0	0.00	31	4	11.43
RNASE2	0	genome.wustl.edu	37	14	21424213	21424213	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	21424213	21424213	C	T	SNP	RNASE2	ENST00000304625	human	ensembl	74_37	+1	known	missense	c.283	p.R95C	0.000	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain,prints_RNaseA	-	no_errors	RNASE2	HGNC	ENSG00000169385	tier1	-	-	61	0	0.00	37	22	37.29
RNASEH2B	0	genome.wustl.edu	37	13	51530587	51530587	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	51530587	51530587	A	-	DEL	RNASEH2B	ENST00000336617	human	ensembl	74_37	+1	known	frame_shift_del	c.916	p.I309fs	0.153	NULL	pfam_RNase_H2_suB	-	no_errors	RNASEH2B	HGNC	ENSG00000136104	tier1			28	0	0.00	45	32	41.56
RNASEH2B	0	genome.wustl.edu	37	13	51530586	51530586	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	51530586	51530586	T	A	SNP	RNASEH2B	ENST00000336617	human	ensembl	74_37	+1	known	missense	c.915	p.N305K	0.023	NULL	pfam_RNase_H2_suB	-	no_errors	RNASEH2B	HGNC	ENSG00000136104				28	0	0.00	71	6	7.79
RNASEL	0	genome.wustl.edu	37	1	182555824	182555824	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	182555824	182555824	G	T	SNP	RNASEL	ENST00000367559	human	ensembl	74_37	-1	known	missense	c.118	p.L40M	0.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_KEN_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Ankyrin_rpt-contain_dom,superfamily_Kinase-like_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_PUG-dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	RNASEL	HGNC	ENSG00000135828	tier1	-	-	60	0	0.00	56	4	6.67
RNF111	0	genome.wustl.edu	37	15	59368393	59368393	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	59368393	59368393	C	T	SNP	RNF111	ENST00000434298	human	ensembl	74_37	+1	known	nonsense	c.1927	p.R643*	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF111	HGNC	ENSG00000157450	tier1	-	-	40	0	0.00	23	13	36.11
RNF111	0	genome.wustl.edu	37	15	59383348	59383348	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	59383348	59383348	A	-	DEL	RNF111	ENST00000434298	human	ensembl	74_37	+1	known	frame_shift_del	c.2761	p.K922fs	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF111	HGNC	ENSG00000157450	tier1			15	0	0.00	19	12	38.71
RNF114	0	genome.wustl.edu	37	20	48568670	48568670	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	48568670	48568670	G	A	SNP	RNF114	ENST00000244061	human	ensembl	74_37	+1	known	missense	c.679	p.D227N	1.000	NULL	pfam_Di19_Zn_binding,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF114	HGNC	ENSG00000124226	tier1	-	-	80	0	0.00	31	17	35.42
RNF128	0	genome.wustl.edu	37	X	106031215	106031215	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	106031215	106031215	G	T	SNP	RNF128	ENST00000255499	human	ensembl	74_37	+1	known	missense	c.872	p.R291L	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF128	HGNC	ENSG00000133135	tier1	-	-	63	0	0.00	40	4	9.09
RNF145	0	genome.wustl.edu	37	5	158630642	158630642	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	158630642	158630642	T	-	DEL	RNF145	ENST00000518802	human	ensembl	74_37	-1	known	frame_shift_del	c.74	p.K25fs	0.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF145	HGNC	ENSG00000145860	tier1			32	0	0.00	26	8	23.53
RNF168	0	genome.wustl.edu	37	3	196214437	196214437	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	196214437	196214437	G	A	SNP	RNF168	ENST00000318037	human	ensembl	74_37	-1	known	nonsense	c.391	p.R131*	0.974	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF168	HGNC	ENSG00000163961	tier1	rs201915239	-	61	0	0.00	42	27	39.13
RNF213	0	genome.wustl.edu	37	17	78310294	78310294	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	78310294	78310294	G	A	SNP	RNF213	ENST00000456466	human	ensembl	74_37	+1	known	missense	c.4643	p.R1548H	0.000	NULL	NULL	-	no_errors	RNF213	HGNC	ENSG00000173821	tier1	-	-	64	0	0.00	32	26	44.83
RNF213	0	genome.wustl.edu	37	17	78337441	78337441	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	78337441	78337441	G	A	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	silent	c.11601	p.T3867	0.003	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821	tier1	rs145731088	-	37	0	0.00	22	13	37.14
RNF43	0	genome.wustl.edu	37	17	56435161	56435161	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	56435161	56435161	C	-	DEL	RNF43	ENST00000407977	human	ensembl	74_37	-1	known	frame_shift_del	c.1976	p.G659fs	0.900	NULL	pfam_Znf_C3HC4_RING-type,superfamily_PAS,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF43	HGNC	ENSG00000108375	tier1			57	0	0.00	34	17	33.33
RNMT	0	genome.wustl.edu	37	18	13740228	13740228	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	13740228	13740228	G	T	SNP	RNMT	ENST00000262173	human	ensembl	74_37	+1	known	missense	c.742	p.D248Y	0.846	pfam_mRNA_G-N7_MeTrfase_dom,pfam_Methyltransf_11,pirsf_mRNA_G-N7_MeTrfase	pfam_mRNA_G-N7_MeTrfase_dom,pfam_Methyltransf_11,pirsf_mRNA_G-N7_MeTrfase	-	no_errors	RNMT	HGNC	ENSG00000101654	tier1	-	-	34	0	0.00	32	5	13.51
RNPC3	0	genome.wustl.edu	37	1	104076467	104076468	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	104076467	104076468	AA	-	DEL	RNPC3	ENST00000423855	human	ensembl	74_37	+1	known	frame_shift_del	c.347_348	p.K119fs	0.784:0.699	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RNPC3	HGNC	ENSG00000185946	tier1			20	0	0.00	15	5	25.00
ROBO2	0	genome.wustl.edu	37	3	77623815	77623815	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	77623815	77623815	C	T	SNP	ROBO2	ENST00000461745	human	ensembl	74_37	+1	known	missense	c.2137	p.R713W	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO2	HGNC	ENSG00000185008	tier1	-	-	34	0	0.00	24	15	38.46
ROCK1P1	0	genome.wustl.edu	37	18	121145	121147	+	RNA	DEL	TTG	TTG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTG	TTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	121145	121147	TTG	-	DEL	ROCK1P1	ENST00000608049	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.605:0.625:0.630	-	-	-	no_errors	ROCK1P1	HGNC	ENSG00000263006	tier1			17	0	0.00	11	7	38.89
ROCK1P1	0	genome.wustl.edu	37	18	118357	118357	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	118357	118357	A	0	DEL	ROCK1P1	ENST00000608049	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ROCK1P1	HGNC	ENSG00000263006				47	0	0.00	49	15	23.44
RP1	0	genome.wustl.edu	37	8	55533894	55533894	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	55533894	55533894	G	A	SNP	RP1	ENST00000220676	human	ensembl	74_37	+1	known	missense	c.368	p.R123H	0.998	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237	tier1	-	-	36	0	0.00	24	7	22.58
RP1L1	0	genome.wustl.edu	37	8	10468813	10468813	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	10468813	10468813	C	-	DEL	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	frame_shift_del	c.2795	p.G932fs	0.000	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638	tier1			62	0	0.00	52	17	24.64
RPA1	0	genome.wustl.edu	37	17	1783946	1783946	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	1783946	1783946	C	T	SNP	RPA1	ENST00000254719	human	ensembl	74_37	+1	known	missense	c.1202	p.A401V	0.990	superfamily_NA-bd_OB-fold,tigrfam_Rep_factor_Rpa1	pfam_Rep_factor-A_C,pfam_Rep_factor-A_N,pfam_NA-bd_OB_tRNA,superfamily_NA-bd_OB-fold,tigrfam_Rep_factor_Rpa1	-	no_errors	RPA1	HGNC	ENSG00000132383	tier1	-	-	50	0	0.00	53	23	30.26
RPGRIP1	0	genome.wustl.edu	37	14	21788248	21788248	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	21788248	21788248	A	-	DEL	RPGRIP1	ENST00000206660	human	ensembl	74_37	+1	known	frame_shift_del	c.1379	p.N461fs	0.623	NULL	pfam_DUF3250,superfamily_C2_dom	-	no_errors	RPGRIP1	HGNC	ENSG00000092200	tier1			28	0	0.00	13	12	48.00
RPGRIP1	0	genome.wustl.edu	37	14	21816412	21816412	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	21816412	21816412	G	T	SNP	RPGRIP1	ENST00000206660	human	ensembl	74_37	+1	known	silent	c.3699	p.L1233	0.877	NULL	pfam_DUF3250,superfamily_C2_dom	-	no_errors	RPGRIP1	HGNC	ENSG00000092200	tier1	-	-	48	0	0.00	68	7	9.33
RPH3A	0	genome.wustl.edu	37	12	113319586	113319586	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	113319586	113319586	C	T	SNP	RPH3A	ENST00000389385	human	ensembl	74_37	+1	known	missense	c.1261	p.P421S	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_Znf_FYVE-typ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel,prints_Synaptotagmin,prints_C2_dom	-	no_errors	RPH3A	HGNC	ENSG00000089169	tier1	-	-	19	0	0.00	10	8	44.44
RPH3A	0	genome.wustl.edu	37	12	113285596	113285596	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	113285596	113285596	G	T	SNP	RPH3A	ENST00000389385	human	ensembl	74_37	+1	known	missense	c.179	p.R60M	0.937	pfam_Znf_FYVE-typ,superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	pfam_C2_dom,pfam_Znf_FYVE-typ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel,prints_Synaptotagmin,prints_C2_dom	-	no_errors	RPH3A	HGNC	ENSG00000089169				38	0	0.00	27	3	10.00
RPH3AL	0	genome.wustl.edu	37	17	169327	169327	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	169327	169327	G	T	SNP	RPH3AL	ENST00000331302	human	ensembl	74_37	-1	known	silent	c.235	p.R79	1.000	pfam_Znf_FYVE-typ,superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	pfam_Znf_FYVE-typ,superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RPH3AL	HGNC	ENSG00000181031				66	0	0.00	44	3	6.38
RPIA	0	genome.wustl.edu	37	2	89034075	89034075	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	89034075	89034075	C	A	SNP	RPIA	ENST00000283646	human	ensembl	74_37	+1	known	missense	c.469	p.L157I	1.000	pfam_Ribose5P_isomerase_typA,tigrfam_Ribose5P_isomerase_typA	pfam_Ribose5P_isomerase_typA,tigrfam_Ribose5P_isomerase_typA	-	no_errors	RPIA	HGNC	ENSG00000153574	tier1	-	-	99	0	0.00	72	44	37.93
RPL10A	0	genome.wustl.edu	37	6	35438036	35438036	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	35438036	35438036	G	A	SNP	RPL10A	ENST00000322203	human	ensembl	74_37	+1	known	missense	c.391	p.A131T	1.000	pfam_Ribosomal_L1/biogenesis,superfamily_Ribosomal_L1-like,pirsf_Ribosomal_L1	pfam_Ribosomal_L1/biogenesis,superfamily_Ribosomal_L1-like,pirsf_Ribosomal_L1	-	no_errors	RPL10A	HGNC	ENSG00000198755	tier1	-	-	70	0	0.00	47	15	24.19
RPL12	0	genome.wustl.edu	37	9	130213127	130213127	+	RNA	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	130213127	130213127	A	T	SNP	RPL12	ENST00000497322	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RPL12	HGNC	ENSG00000197958	tier1	-	-	29	0	0.00	13	13	50.00
RPL22	0	genome.wustl.edu	37	1	6257785	6257785	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	6257785	6257785	T	-	DEL	RPL22	ENST00000234875	human	ensembl	74_37	-1	known	frame_shift_del	c.44	p.K15fs	1.000	pfam_Ribosomal_L22e	pfam_Ribosomal_L22e	-	no_errors	RPL22	HGNC	ENSG00000116251	tier1			35	0	0.00	26	13	33.33
RPL22P19	0	genome.wustl.edu	37	12	125420367	125420367	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	125420367	125420367	T	-	DEL	RPL22P19	ENST00000480427	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPL22P19	HGNC	ENSG00000241129	tier1			18	0	0.00	11	9	45.00
RPL26L1	0	genome.wustl.edu	37	5	172387036	172387036	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	172387036	172387036	G	A	SNP	RPL26L1	ENST00000265100	human	ensembl	74_37	+1	known	missense	c.160	p.E54K	1.000	pfam_KOW,superfamily_Translation_prot_SH3-like,smart_KOW,tigrfam_Ribosomal_L26/L24P_euk/arc	pfam_KOW,superfamily_Translation_prot_SH3-like,smart_KOW,tigrfam_Ribosomal_L26/L24P_euk/arc	-	no_errors	RPL26L1	HGNC	ENSG00000037241	tier1	-	-	61	0	0.00	31	24	43.64
RPL28	0	genome.wustl.edu	37	19	55899415	55899415	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	55899415	55899415	T	C	SNP	RPL28	ENST00000458349	human	ensembl	74_37	+1	known	missense	c.323	p.M108T	1.000	NULL	NULL	-	no_errors	RPL28	HGNC	ENSG00000108107	tier1	-	-	48	0	0.00	18	21	53.85
RPL32P3	0	genome.wustl.edu	37	3	129112515	129112515	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	129112515	129112515	G	T	SNP	RPL32P3	ENST00000499631	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RPL32P3	HGNC	ENSG00000251474	tier1	-	-	37	0	0.00	35	5	12.50
RPP40	0	genome.wustl.edu	37	6	4996642	4996642	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	4996642	4996642	G	A	SNP	RPP40	ENST00000380051	human	ensembl	74_37	-1	known	missense	c.572	p.S191L	0.662	pfam_RNase_P_Rpp40	pfam_RNase_P_Rpp40	-	no_errors	RPP40	HGNC	ENSG00000124787	tier1	-	-	45	0	0.00	25	10	28.57
RPS24	0	genome.wustl.edu	37	10	79814587	79814587	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	79814587	79814587	C	A	SNP	RPS24	ENST00000440692	human	ensembl	74_37	+1	known	missense	c.689	p.A230D	0.001	NULL	pfam_Ribosomal_S24e,superfamily_Ribosomal_L23/L15e_core_dom	-	no_errors	RPS24	HGNC	ENSG00000138326	tier1	-	-	96	0	0.00	53	20	27.40
RPS27L	0	genome.wustl.edu	37	15	63447758	63447759	+	Frame_Shift_Ins	INS	-	-	AT			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	63447758	63447759	-	AT	INS	RPS27L	ENST00000439025	human	ensembl	74_37	-1	putative	frame_shift_ins	c.288_287	p.H97fs	0.012:0.010	NULL	pfam_Ribosomal_S27e,superfamily_Ribosomal_zn-bd	-	no_errors	RPS27L	HGNC	ENSG00000185088	tier1			73	0	0.00	46	29	38.67
RPS27L	0	genome.wustl.edu	37	15	63447760	63447760	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	63447760	63447760	G	T	SNP	RPS27L	ENST00000439025	human	ensembl	74_37	-1	putative	missense	c.286	p.L96I	0.001	NULL	pfam_Ribosomal_S27e,superfamily_Ribosomal_zn-bd	-	no_errors	RPS27L	HGNC	ENSG00000185088	tier1	-	-	74	0	0.00	43	32	42.67
RPS6KC1	0	genome.wustl.edu	37	1	213405564	213405564	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	213405564	213405564	G	T	SNP	RPS6KC1	ENST00000366960	human	ensembl	74_37	+1	known	missense	c.1191	p.E397D	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_MIT,pfam_Phox,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Phox,smart_Phox,smart_MIT,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Phox,pfscan_Prot_kinase_dom	-	no_errors	RPS6KC1	HGNC	ENSG00000136643	tier1	-	-	184	0	0.00	173	65	27.31
RPUSD4	0	genome.wustl.edu	37	11	126073407	126073407	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	126073407	126073407	C	T	SNP	RPUSD4	ENST00000298317	human	ensembl	74_37	-1	known	missense	c.1040	p.R347H	0.019	superfamily_PsdUridine_synth_cat_dom	pfam_PsdUridine_synth_RsuA/RluD,superfamily_PsdUridine_synth_cat_dom	-	no_errors	RPUSD4	HGNC	ENSG00000165526	tier1	-	-	84	0	0.00	52	39	42.86
RRN3P1	0	genome.wustl.edu	37	16	21817658	21817658	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	21817658	21817658	A	-	DEL	RRN3P1	ENST00000546471	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RRN3P1	HGNC	ENSG00000248124	tier1			23	0	0.00	30	7	18.92
RSAD1	0	genome.wustl.edu	37	17	48559705	48559705	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	48559705	48559705	G	T	SNP	RSAD1	ENST00000258955	human	ensembl	74_37	+1	known	missense	c.728	p.G243V	0.998	smart_Elp3/MiaB/NifB,tigrfam_Coprogen_oxidase_HemN-rel	pfam_HemN_C_dom,pfam_rSAM,smart_Elp3/MiaB/NifB,tigrfam_Coprogen_oxidase_HemN-rel	-	no_errors	RSAD1	HGNC	ENSG00000136444	tier1	-	-	66	0	0.00	50	4	7.27
RSPH4A	0	genome.wustl.edu	37	6	116951691	116951691	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	116951691	116951691	G	T	SNP	RSPH4A	ENST00000368581	human	ensembl	74_37	+1	known	nonsense	c.1756	p.E586*	1.000	NULL	pfam_Radial_spoke	-	no_errors	RSPH4A	HGNC	ENSG00000111834				69	0	0.00	59	4	6.35
RSPO4	0	genome.wustl.edu	37	20	941100	941100	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	941100	941100	G	T	SNP	RSPO4	ENST00000217260	human	ensembl	74_37	-1	known	missense	c.605	p.P202H	0.000	NULL	superfamily_Growth_fac_rcpt_N_dom,superfamily_Thrombospondin_1_rpt,smart_Furin_repeat,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	RSPO4	HGNC	ENSG00000101282	tier1	-	-	102	0	0.00	49	28	36.36
RTCB	0	genome.wustl.edu	37	22	32793997	32793997	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	32793997	32793997	C	T	SNP	RTCB	ENST00000216038	human	ensembl	74_37	-1	known	missense	c.745	p.D249N	1.000	pfam_RtcB,superfamily_RtcB	pfam_RtcB,superfamily_RtcB	-	no_errors	RTCB	HGNC	ENSG00000100220	tier1	-	-	98	0	0.00	44	21	32.31
RTDR1	0	genome.wustl.edu	37	22	23404125	23404125	+	Splice_Site	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	23404125	23404125	T	C	SNP	RTDR1	ENST00000216036	human	ensembl	74_37	-1	known	splice_site	c.654-2	e5-2	0.998	-	-	-	no_errors	RTDR1	HGNC	ENSG00000100218	tier1	-	-	32	0	0.00	20	16	44.44
RTEL1	0	genome.wustl.edu	37	20	62319098	62319100	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	62319098	62319100	TCC	-	DEL	RTEL1	ENST00000318100	human	ensembl	74_37	+1	known	in_frame_del	c.1456_1458	p.S487in_frame_del	0.959:0.995:0.980	superfamily_P-loop_NTPase,tigrfam_DNA_helicase_DNA-repair_Rad3	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	RTEL1	HGNC	ENSG00000258366	tier1			106	0	0.00	61	20	24.69
RTN3	0	genome.wustl.edu	37	11	63525656	63525656	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	63525656	63525656	A	-	DEL	RTN3	ENST00000377819	human	ensembl	74_37	+1	known	frame_shift_del	c.3082	p.K1030fs	1.000	pfscan_Reticulon	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN3	HGNC	ENSG00000133318	tier1			24	0	0.00	27	18	40.00
RTN4IP1	0	genome.wustl.edu	37	6	107076703	107076703	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	107076703	107076703	A	G	SNP	RTN4IP1	ENST00000369063	human	ensembl	74_37	-1	known	missense	c.194	p.M65T	0.982	superfamily_GroES-like,smart_PKS_ER	pfam_ADH_C,pfam_ADH_GroES-like,superfamily_GroES-like,smart_PKS_ER	-	no_errors	RTN4IP1	HGNC	ENSG00000130347	tier1	-	-	47	0	0.00	30	7	18.92
RUFY3	0	genome.wustl.edu	37	4	71672454	71672454	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	71672454	71672454	G	T	SNP	RUFY3	ENST00000507333	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RUFY3	HGNC	ENSG00000018189	tier1	-	-	89	0	0.00	75	4	5.06
RUNX2	0	genome.wustl.edu	37	6	45296446	45296446	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	45296446	45296446	A	-	DEL	RUNX2	ENST00000352853	human	ensembl	74_37	+1	known	frame_shift_del	c.187	p.G66fs	0.983	NULL	pfam_Runt_dom,pfam_RunxI_C_dom,superfamily_p53-like_TF_DNA-bd,pfscan_Runt_dom,prints_AML1_Runt	-	no_errors	RUNX2	HGNC	ENSG00000124813	tier1			41	0	0.00	12	36	75.00
RUSC2	0	genome.wustl.edu	37	9	35555543	35555543	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	35555543	35555543	A	C	SNP	RUSC2	ENST00000361226	human	ensembl	74_37	+1	known	missense	c.2501	p.Q834P	0.129	NULL	pfam_Run,pfam_SH3_2,superfamily_SH3_domain,smart_Run,smart_SH3_domain,pfscan_Run,pfscan_SH3_domain	-	no_errors	RUSC2	HGNC	ENSG00000198853	tier1	-	-	52	0	0.00	31	18	36.73
RWDD4	0	genome.wustl.edu	37	4	184572382	184572382	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	184572382	184572382	A	-	DEL	RWDD4	ENST00000326397	human	ensembl	74_37	-1	known	frame_shift_del	c.204	p.F68fs	0.995	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,pfscan_RWD-domain	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,pfscan_RWD-domain	-	no_errors	RWDD4	HGNC	ENSG00000182552	tier1			132	0	0.00	89	47	34.56
RXFP3	0	genome.wustl.edu	37	5	33938025	33938025	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	33938025	33938025	C	T	SNP	RXFP3	ENST00000330120	human	ensembl	74_37	+1	known	missense	c.1180	p.R394C	1.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Formyl_pep_rcpt	-	no_errors	RXFP3	HGNC	ENSG00000182631	tier1	-	-	43	0	0.00	51	9	15.00
RXRA	0	genome.wustl.edu	37	9	137331938	137331939	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	137331938	137331939	AA	-	DEL	RXRA	ENST00000356384	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998:0.998	-	-	-	no_errors	RXRA	HGNC	ENSG00000186350	tier1			8	0	0.00	3	6	66.67
RXRG	0	genome.wustl.edu	37	1	165414181	165414181	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	165414181	165414181	G	A	SNP	RXRG	ENST00000465764	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.577	-	-	-	no_errors	RXRG	HGNC	ENSG00000143171	tier1	-	-	110	0	0.00	90	37	29.13
RYR1	0	genome.wustl.edu	37	19	38981338	38981338	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	38981338	38981338	G	A	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	silent	c.6093	p.L2031	0.377	superfamily_MG_RAP_rcpt_1	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218	tier1	-	-	38	0	0.00	22	16	42.11
RYR2	0	genome.wustl.edu	37	1	237897051	237897051	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	237897051	237897051	G	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.11080	p.A3694S	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				27	0	0.00	37	2	5.13
RYR3	0	genome.wustl.edu	37	15	34112980	34112980	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	34112980	34112980	A	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.10782	p.E3594D	1.000	superfamily_ARM-type_fold	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	73	0	0.00	43	35	44.87
RYR3	0	genome.wustl.edu	37	15	34048506	34048506	+	Splice_Site	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	34048506	34048506	G	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	splice_site	c.8516-1	e59-1	1.000	-	-	-	no_errors	RYR3	HGNC	ENSG00000198838				49	0	0.00	43	3	6.52
SACS	0	genome.wustl.edu	37	13	23910851	23910851	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	23910851	23910851	G	T	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	silent	c.7164	p.T2388	0.998	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	tier1	-	-	32	0	0.00	30	17	36.17
SACS	0	genome.wustl.edu	37	13	23914687	23914687	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	23914687	23914687	T	-	DEL	SACS	ENST00000382292	human	ensembl	74_37	-1	known	frame_shift_del	c.3328	p.I1110fs	1.000	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	tier1			46	0	0.00	39	9	18.75
SALL3	0	genome.wustl.edu	37	18	76753309	76753309	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	76753309	76753309	C	T	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	missense	c.1318	p.R440C	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463	tier1	-	-	35	0	0.00	18	16	47.06
SAMD14	0	genome.wustl.edu	37	17	48191580	48191581	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	48191580	48191581	-	G	INS	SAMD14	ENST00000503131	human	ensembl	74_37	-1	known	frame_shift_ins	c.997_996	p.Y332fs	1.000:1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD14	HGNC	ENSG00000167100	tier1			36	0	0.00	17	9	34.62
SAMD9	0	genome.wustl.edu	37	7	92731997	92731997	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	92731997	92731997	G	A	SNP	SAMD9	ENST00000379958	human	ensembl	74_37	-1	known	silent	c.3414	p.N1138	0.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413	tier1	-	-	53	0	0.00	30	18	37.50
SAMD9	0	genome.wustl.edu	37	7	92734717	92734717	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	92734717	92734717	T	C	SNP	SAMD9	ENST00000379958	human	ensembl	74_37	-1	known	missense	c.694	p.N232D	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413	tier1	-	-	90	0	0.00	60	32	34.78
SAMM50	0	genome.wustl.edu	37	22	44351336	44351336	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	44351336	44351336	G	-	DEL	SAMM50	ENST00000493161	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SAMM50	HGNC	ENSG00000100347	tier1			8	0	0.00	8	2	20.00
SAMM50	0	genome.wustl.edu	37	22	44392209	44392209	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	44392209	44392209	T	-	DEL	SAMM50	ENST00000493621	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SAMM50	HGNC	ENSG00000100347	tier1			68	0	0.00	49	16	24.62
SAP30BP	0	genome.wustl.edu	37	17	73698584	73698584	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	73698584	73698584	C	T	SNP	SAP30BP	ENST00000584667	human	ensembl	74_37	+1	known	nonsense	c.421	p.R141*	1.000	pfam_SAP30BP	pfam_SAP30BP	-	no_errors	SAP30BP	HGNC	ENSG00000161526	tier1	-	-	74	0	0.00	40	23	36.51
SAT1	0	genome.wustl.edu	37	X	23802147	23802147	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	23802147	23802147	A	-	DEL	SAT1	ENST00000379251	human	ensembl	74_37	+1	known	frame_shift_del	c.439	p.N150fs	0.001	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	SAT1	HGNC	ENSG00000130066	tier1			13	0	0.00	5	9	64.29
SBF1	0	genome.wustl.edu	37	22	50900786	50900788	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	50900786	50900788	CTT	-	DEL	SBF1	ENST00000380817	human	ensembl	74_37	-1	known	in_frame_del	c.2244_2242	p.K748in_frame_del	1.000:1.000:1.000	pfam_SBF2	pfam_SBF2,pfam_DENN_dom,pfam_uDENN_dom,pfam_Myotubularin-like_Pase_dom,pfam_dDENN_dom,pfam_GRAM,pfam_Pleckstrin_homology,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_GRAM,smart_Pleckstrin_homology,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_Pleckstrin_homology	-	no_errors	SBF1	HGNC	ENSG00000100241	tier1			72	0	0.00	32	16	33.33
SBNO1	0	genome.wustl.edu	37	12	123794283	123794283	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	123794283	123794283	T	-	DEL	SBNO1	ENST00000420886	human	ensembl	74_37	-1	known	frame_shift_del	c.3416	p.N1139fs	1.000	NULL	pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Prismane-like	-	no_errors	SBNO1	HGNC	ENSG00000139697	tier1			53	0	0.00	29	18	38.30
SBSN	0	genome.wustl.edu	37	19	36017923	36017924	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	36017923	36017924	-	C	INS	SBSN	ENST00000452271	human	ensembl	74_37	-1	novel	frame_shift_ins	c.1261_1260	p.Q420fs	0.000:0.000	NULL	NULL	-	no_errors	SBSN	HGNC	ENSG00000189001	tier1			49	0	0.00	28	25	47.17
SCAF11	0	genome.wustl.edu	37	12	46321475	46321475	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	46321475	46321475	T	-	DEL	SCAF11	ENST00000369367	human	ensembl	74_37	-1	known	frame_shift_del	c.2009	p.N670fs	0.287	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	SCAF11	HGNC	ENSG00000139218	tier1			18	0	0.00	19	6	24.00
SCAMP1	0	genome.wustl.edu	37	5	77772628	77772629	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	77772628	77772629	AA	-	DEL	SCAMP1	ENST00000320280	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.109:0.094	-	-	-	no_errors	SCAMP1	HGNC	ENSG00000085365	tier1			19	0	0.00	11	7	38.89
SCAP	0	genome.wustl.edu	37	3	47462072	47462072	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	47462072	47462072	C	T	SNP	SCAP	ENST00000265565	human	ensembl	74_37	-1	known	missense	c.1535	p.R512H	1.000	NULL	pfam_Patched,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_SSD,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SCAP	HGNC	ENSG00000114650	tier1	-	-	163	0	0.00	73	30	29.13
SCAPER	0	genome.wustl.edu	37	15	77067201	77067201	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	77067201	77067201	T	-	DEL	SCAPER	ENST00000324767	human	ensembl	74_37	-1	known	frame_shift_del	c.1030	p.T344fs	1.000	NULL	smart_Znf_U1	-	no_errors	SCAPER	HGNC	ENSG00000140386	tier1			46	0	0.00	25	18	41.86
SCAPER	0	genome.wustl.edu	37	15	76958034	76958034	+	Nonsense_Mutation	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	76958034	76958034	T	A	SNP	SCAPER	ENST00000324767	human	ensembl	74_37	-1	known	nonsense	c.2605	p.K869*	0.865	NULL	smart_Znf_U1	-	no_errors	SCAPER	HGNC	ENSG00000140386				51	0	0.00	37	2	5.13
SCARA3	0	genome.wustl.edu	37	8	27516366	27516366	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	27516366	27516366	G	A	SNP	SCARA3	ENST00000301904	human	ensembl	74_37	+1	known	missense	c.679	p.V227M	0.827	NULL	pfam_Collagen	-	no_errors	SCARA3	HGNC	ENSG00000168077	tier1	rs200594740	-	36	0	0.00	21	5	19.23
SCARF2	0	genome.wustl.edu	37	22	20780161	20780161	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	20780161	20780161	G	T	SNP	SCARF2	ENST00000405555	human	ensembl	74_37	-1	known	missense	c.2102	p.P701H	1.000	NULL	pfam_EGF_laminin,superfamily_Growth_fac_rcpt_N_dom,smart_EGF_laminin,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	SCARF2	HGNC	ENSG00000244486	tier1	-	-	73	0	0.00	35	25	41.67
SCCPDH	0	genome.wustl.edu	37	1	246923522	246923522	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	246923522	246923522	A	-	DEL	SCCPDH	ENST00000366510	human	ensembl	74_37	+1	known	frame_shift_del	c.983	p.K329fs	1.000	pfam_Saccharopine_DH/HSpermid_syn	pfam_Saccharopine_DH/HSpermid_syn	-	no_errors	SCCPDH	HGNC	ENSG00000143653	tier1			47	0	0.00	54	18	25.00
SCD	0	genome.wustl.edu	37	10	102107979	102107979	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	102107979	102107979	G	T	SNP	SCD	ENST00000370355	human	ensembl	74_37	+1	known	missense	c.186	p.K62N	0.996	NULL	pfam_Fatty_acid_desaturase-1,prints_Fatty_acid_desaturase-1_core	-	no_errors	SCD	HGNC	ENSG00000099194	tier1	-	-	71	0	0.00	56	4	6.67
SCIN	0	genome.wustl.edu	37	7	12668733	12668733	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	12668733	12668733	G	A	SNP	SCIN	ENST00000297029	human	ensembl	74_37	+1	known	missense	c.1205	p.R402H	1.000	smart_Villin/Gelsolin	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	SCIN	HGNC	ENSG00000006747	tier1	-	-	35	0	0.00	33	24	42.11
SCML4	0	genome.wustl.edu	37	6	108066223	108066223	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	108066223	108066223	G	T	SNP	SCML4	ENST00000369021	human	ensembl	74_37	-1	known	missense	c.525	p.H175Q	1.000	pfam_DUF3588	pfam_DUF3588	-	no_errors	SCML4	HGNC	ENSG00000146285				55	0	0.00	26	2	7.14
SCN11A	0	genome.wustl.edu	37	3	38949441	38949441	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	38949441	38949441	T	-	DEL	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	frame_shift_del	c.1472	p.K491fs	0.352	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356	tier1			24	0	0.00	21	5	19.23
SCN4A	0	genome.wustl.edu	37	17	62020367	62020367	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	62020367	62020367	G	T	SNP	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	silent	c.4107	p.T1369	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN4A	HGNC	ENSG00000007314	tier1	-	-	79	0	0.00	88	5	5.38
SCN7A	0	genome.wustl.edu	37	2	167313546	167313546	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	167313546	167313546	A	G	SNP	SCN7A	ENST00000409855	human	ensembl	74_37	-1	known	missense	c.1124	p.V375A	0.998	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN7A	HGNC	ENSG00000136546	tier1	-	-	36	0	0.00	12	14	53.85
SCN8A	0	genome.wustl.edu	37	12	52156424	52156424	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	52156424	52156424	C	T	SNP	SCN8A	ENST00000354534	human	ensembl	74_37	+1	known	silent	c.2508	p.D836	0.931	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,prints_Na_channel_a8su,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN8A	HGNC	ENSG00000196876	tier1	-	-	47	0	0.00	19	18	48.65
SCNM1	0	genome.wustl.edu	37	1	151139074	151139075	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	151139074	151139075	TT	-	DEL	SCNM1	ENST00000471039	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.045:0.054	-	-	-	no_errors	SCNM1	HGNC	ENSG00000163156	tier1			32	0	0.00	33	6	15.38
SCNM1	0	genome.wustl.edu	37	1	151139074	151139076	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	151139074	151139076	TTT	-	DEL	SCNM1	ENST00000471039	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.045:0.054:0.071	-	-	-	no_errors	SCNM1	HGNC	ENSG00000163156	tier1			32	0	0.00	27	12	30.77
SCRN2	0	genome.wustl.edu	37	17	45915676	45915676	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	45915676	45915676	C	T	SNP	SCRN2	ENST00000290216	human	ensembl	74_37	-1	known	missense	c.1079	p.R360H	0.002	NULL	pfam_Peptidase_C69,pfam_Pept_C45_AAT	-	no_errors	SCRN2	HGNC	ENSG00000141295	tier1	-	-	67	0	0.00	18	21	53.85
SCUBE2	0	genome.wustl.edu	37	11	9069061	9069061	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	9069061	9069061	C	T	SNP	SCUBE2	ENST00000457346	human	ensembl	74_37	-1	known	missense	c.1844	p.R615H	1.000	NULL	pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	SCUBE2	HGNC	ENSG00000175356	tier1	rs144080898	-	49	0	0.00	31	20	39.22
SCYL3	0	genome.wustl.edu	37	1	169836093	169836093	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	169836093	169836093	C	A	SNP	SCYL3	ENST00000367770	human	ensembl	74_37	-1	known	silent	c.759	p.V253	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_HEAT_type_2,pfscan_Prot_kinase_dom	-	no_errors	SCYL3	HGNC	ENSG00000000457	tier1	-	-	54	0	0.00	45	9	16.67
SDHD	0	genome.wustl.edu	37	11	111959653	111959653	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	111959653	111959653	G	T	SNP	SDHD	ENST00000375549	human	ensembl	74_37	+1	known	missense	c.232	p.G78C	1.000	pfam_CybS	pfam_CybS	-	no_errors	SDHD	HGNC	ENSG00000204370	tier1	-	-	103	0	0.00	53	41	43.62
SEC14L2	0	genome.wustl.edu	37	22	30812026	30812026	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	30812026	30812026	C	T	SNP	SEC14L2	ENST00000312932	human	ensembl	74_37	+1	known	silent	c.861	p.G287	1.000	superfamily_GOLD,pfscan_GOLD	pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_GOLD,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,prints_CRAL-bd_toc_tran	-	no_errors	SEC14L2	HGNC	ENSG00000100003	tier1	-	-	44	0	0.00	50	17	25.37
SEC22B	0	genome.wustl.edu	37	1	145116324	145116327	+	RNA	DEL	TTTG	TTTG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTG	TTTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	145116324	145116327	TTTG	-	DEL	SEC22B	ENST00000453618	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005:0.004:0.005:0.005	-	-	-	no_errors	SEC22B	HGNC	ENSG00000223380	tier1			62	0	0.00	101	7	6.48
SEC23IP	0	genome.wustl.edu	37	10	121657803	121657804	+	RNA	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	121657803	121657804	-	T	INS	SEC23IP	ENST00000470478	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004:0.004	-	-	-	no_errors	SEC23IP	HGNC	ENSG00000107651	tier1			19	0	0.00	3	16	84.21
SEC24B	0	genome.wustl.edu	37	4	110452575	110452575	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	110452575	110452575	A	G	SNP	SEC24B	ENST00000265175	human	ensembl	74_37	+1	known	missense	c.3287	p.D1096G	1.000	pfam_Sec23/24_helical_dom,superfamily_Sec23/24_helical_dom	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24B	HGNC	ENSG00000138802	tier1	-	-	60	0	0.00	49	25	33.78
SEC24D	0	genome.wustl.edu	37	4	119736808	119736808	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	119736808	119736808	T	C	SNP	SEC24D	ENST00000506622	human	ensembl	74_37	-1	known	missense	c.578	p.D193G	0.000	NULL	NULL	-	no_errors	SEC24D	HGNC	ENSG00000150961	tier1	-	-	96	0	0.00	63	33	34.38
SEC63	0	genome.wustl.edu	37	6	108277241	108277242	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	108277241	108277242	-	G	INS	SEC63	ENST00000446496	human	ensembl	74_37	-1	known	frame_shift_ins	c.194_193	p.R65fs	0.000:0.000	NULL	NULL	-	no_errors	SEC63	HGNC	ENSG00000025796	tier1			48	0	0.00	41	18	30.51
SECISBP2	0	genome.wustl.edu	37	9	91972418	91972418	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	91972418	91972418	C	T	SNP	SECISBP2	ENST00000375807	human	ensembl	74_37	+1	known	missense	c.2206	p.R736C	1.000	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45	pfam_Ribosomal_L7Ae/L30e/S12e/Gad45	-	no_errors	SECISBP2	HGNC	ENSG00000187742				29	0	0.00	14	2	12.50
SEL1L	0	genome.wustl.edu	37	14	81945992	81945992	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	81945992	81945992	G	A	SNP	SEL1L	ENST00000336735	human	ensembl	74_37	-1	known	silent	c.2139	p.G713	0.000	NULL	pfam_Sel1-like,pfam_FN_type2_col-bd,superfamily_Kringle-like,smart_FN_type2_col-bd,smart_Sel1-like,pfscan_FN_type2_col-bd	-	no_errors	SEL1L	HGNC	ENSG00000071537	tier1	-	-	63	0	0.00	30	25	45.45
SEL1L2	0	genome.wustl.edu	37	20	13894524	13894524	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	13894524	13894524	G	A	SNP	SEL1L2	ENST00000284951	human	ensembl	74_37	-1	known	silent	c.453	p.D151	0.999	pfam_Sel1-like,smart_Sel1-like	pfam_Sel1-like,smart_Sel1-like	-	no_errors	SEL1L2	HGNC	ENSG00000101251	tier1	-	-	30	0	0.00	22	11	33.33
SEL1L3	0	genome.wustl.edu	37	4	25780793	25780793	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	25780793	25780793	C	T	SNP	SEL1L3	ENST00000399878	human	ensembl	74_37	-1	known	silent	c.2490	p.A830	0.195	pfam_Sel1-like,smart_Sel1-like	pfam_Sel1-like,superfamily_ConA-like_lec_gl_sf,smart_Sel1-like	-	no_errors	SEL1L3	HGNC	ENSG00000091490	tier1	-	-	56	0	0.00	29	24	45.28
SEMA3D	0	genome.wustl.edu	37	7	84628713	84628713	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	84628713	84628713	T	-	DEL	SEMA3D	ENST00000484038	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	SEMA3D	HGNC	ENSG00000153993	tier1			32	0	0.00	19	13	40.62
SEMA3G	0	genome.wustl.edu	37	3	52474799	52474799	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	52474799	52474799	G	A	SNP	SEMA3G	ENST00000231721	human	ensembl	74_37	-1	known	silent	c.969	p.L323	0.004	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3G	HGNC	ENSG00000010319	tier1	-	-	28	0	0.00	14	13	48.15
SEMG2	0	genome.wustl.edu	37	20	43851942	43851942	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	43851942	43851942	G	T	SNP	SEMG2	ENST00000372769	human	ensembl	74_37	+1	known	missense	c.1669	p.V557L	0.000	pfam_Semenogelin	pfam_Semenogelin	-	no_errors	SEMG2	HGNC	ENSG00000124157				25	0	0.00	18	2	10.00
SENP1	0	genome.wustl.edu	37	12	48458896	48458897	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	48458896	48458897	TT	-	DEL	SENP1	ENST00000004980	human	ensembl	74_37	-1	known	frame_shift_del	c.1227_1226	p.K409fs	0.206:0.381	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP1	HGNC	ENSG00000079387	tier1			52	0	0.00	39	19	32.76
SENP5	0	genome.wustl.edu	37	3	196613470	196613470	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	196613470	196613470	G	T	SNP	SENP5	ENST00000323460	human	ensembl	74_37	+1	known	missense	c.1418	p.C473F	0.637	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP5	HGNC	ENSG00000119231	tier1	-	-	42	0	0.00	55	4	6.78
SEPHS2	0	genome.wustl.edu	37	16	30455931	30455931	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	30455931	30455931	C	T	SNP	SEPHS2	ENST00000542752	human	ensembl	74_37	-1	known	missense	c.947	p.G316E	1.000	pfam_AIR_synth_C_dom,superfamily_AIR_synth_C_dom,pirsf_SelD,tigrfam_SelD	pfam_AIR_synth_C_dom,pfam_AIR_synth_N_dom,superfamily_AIR_synth_C_dom,superfamily_PurM_N-like,pirsf_SelD,tigrfam_SelD	-	no_errors	SEPHS2	HGNC	ENSG00000179918	tier1	-	-	44	0	0.00	30	26	46.43
SEPT10	0	genome.wustl.edu	37	2	110301828	110301828	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	110301828	110301828	T	-	DEL	SEPT10	ENST00000356688	human	ensembl	74_37	-1	putative	frame_shift_del	c.1506	p.K502fs	0.004	NULL	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase	-	no_errors	SEPT10	HGNC	ENSG00000186522	tier1			49	0	0.00	38	20	34.48
SEPT11	0	genome.wustl.edu	37	4	77936159	77936159	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	77936159	77936159	G	A	SNP	SEPT11	ENST00000541121	human	ensembl	74_37	+1	known	missense	c.706	p.A236T	0.969	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT11	HGNC	ENSG00000138758	tier1	-	-	61	0	0.00	49	22	30.99
SEPT5	0	genome.wustl.edu	37	22	19707861	19707861	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	19707861	19707861	C	T	SNP	SEPT5	ENST00000383045	human	ensembl	74_37	+1	known	silent	c.408	p.D136	1.000	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT5	HGNC	ENSG00000184702	tier1	-	-	96	0	0.00	46	20	30.30
SERPINB2	0	genome.wustl.edu	37	18	61565041	61565041	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	61565041	61565041	A	-	DEL	SERPINB2	ENST00000299502	human	ensembl	74_37	+1	known	frame_shift_del	c.498	p.K168fs	0.999	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB2	HGNC	ENSG00000197632	tier1			54	0	0.00	40	17	29.82
SESTD1	0	genome.wustl.edu	37	2	180016104	180016104	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	180016104	180016104	G	A	SNP	SESTD1	ENST00000428443	human	ensembl	74_37	-1	known	silent	c.384	p.S128	0.974	superfamily_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	superfamily_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	SESTD1	HGNC	ENSG00000187231	tier1	-	-	81	0	0.00	44	37	45.68
SETD1B	0	genome.wustl.edu	37	12	122242658	122242658	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	122242658	122242658	C	-	DEL	SETD1B	ENST00000267197	human	ensembl	74_37	+1	known	frame_shift_del	c.15	p.H8fs	1.000	NULL	pfam_COMPASS_Set1_N-SET,pfam_SET_dom,pfam_RRM_dom,smart_RRM_dom,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_RRM_dom	-	no_errors	SETD1B	HGNC	ENSG00000139718	tier1			13	0	0.00	17	12	41.38
SETD3	0	genome.wustl.edu	37	14	99871696	99871696	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	99871696	99871696	A	-	DEL	SETD3	ENST00000331768	human	ensembl	74_37	-1	known	frame_shift_del	c.937	p.Y313fs	1.000	pfam_SET_dom	pfam_Rubisco_LSMT_subst-bd,pfam_SET_dom,superfamily_Rubisco_LSMT_subst-bd	-	no_errors	SETD3	HGNC	ENSG00000183576	tier1			42	0	0.00	26	20	43.48
SETD8	0	genome.wustl.edu	37	12	123892040	123892040	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	123892040	123892040	C	T	SNP	SETD8	ENST00000330479	human	ensembl	74_37	+1	known	silent	c.849	p.C283	0.988	pfam_SET_dom,smart_SET_dom,pirsf_Hist_H4-K20_MeTrfase,pfscan_SET_dom	pfam_SET_dom,smart_SET_dom,pirsf_Hist_H4-K20_MeTrfase,pfscan_SET_dom	-	no_errors	SETD8	HGNC	ENSG00000183955	tier1	-	-	141	0	0.00	86	79	47.88
SETX	0	genome.wustl.edu	37	9	135158548	135158550	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	135158548	135158550	AAA	-	DEL	SETX	ENST00000474172	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.010:0.003:0.000	-	-	-	no_errors	SETX	HGNC	ENSG00000107290	tier1			41	0	0.00	16	14	46.67
SEZ6L	0	genome.wustl.edu	37	22	26692908	26692908	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	26692908	26692908	G	T	SNP	SEZ6L	ENST00000248933	human	ensembl	74_37	+1	known	missense	c.1024	p.G342C	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L	HGNC	ENSG00000100095				48	0	0.00	38	4	9.52
SF3B2	0	genome.wustl.edu	37	11	65836146	65836146	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	65836146	65836146	A	-	DEL	SF3B2	ENST00000322535	human	ensembl	74_37	+1	known	frame_shift_del	c.2618	p.K875fs	1.000	NULL	pfam_DUF382,pfam_PSP,pfam_SAP_dom,smart_SAP_dom,smart_PSP,pfscan_SAP_dom	-	no_errors	SF3B2	HGNC	ENSG00000087365	tier1			44	0	0.00	31	15	32.61
SF3B4	0	genome.wustl.edu	37	1	149895759	149895760	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	149895759	149895760	-	G	INS	SF3B4	ENST00000271628	human	ensembl	74_37	-1	known	frame_shift_ins	c.1061_1060	p.R354fs	1.000:0.998	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SF3B4	HGNC	ENSG00000143368	tier1			66	0	0.00	74	22	22.92
SFI1	0	genome.wustl.edu	37	22	31981087	31981087	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	31981087	31981087	G	T	SNP	SFI1	ENST00000400288	human	ensembl	74_37	+1	known	missense	c.1380	p.W460C	0.979	NULL	superfamily_Cyclin-like	-	no_errors	SFI1	HGNC	ENSG00000198089	tier1	-	-	100	0	0.00	99	6	5.71
SGIP1	0	genome.wustl.edu	37	1	67099769	67099769	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	67099769	67099769	A	-	DEL	SGIP1	ENST00000237247	human	ensembl	74_37	+1	known	frame_shift_del	c.106	p.K38fs	0.997	NULL	pfam_Muniscin_C-term_mu_dom,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C	-	no_errors	SGIP1	HGNC	ENSG00000118473	tier1			37	0	0.00	28	13	31.71
SGOL1	0	genome.wustl.edu	37	3	20212755	20212756	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	20212755	20212756	AA	-	DEL	SGOL1	ENST00000460637	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	SGOL1	HGNC	ENSG00000129810	tier1			18	0	0.00	9	6	40.00
SH2D4B	0	genome.wustl.edu	37	10	82331259	82331259	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	82331259	82331259	G	A	SNP	SH2D4B	ENST00000470604	human	ensembl	74_37	+1	known	silent	c.417	p.A139	0.035	NULL	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SH2D4B	HGNC	ENSG00000178217	tier1	rs151180626	-	33	0	0.00	14	5	26.32
SH3BP1	0	genome.wustl.edu	37	22	38046679	38046679	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	38046679	38046679	G	A	SNP	SH3BP1	ENST00000357436	human	ensembl	74_37	+1	known	silent	c.1545	p.P515	0.000	NULL	pfam_RhoGAP_dom,pfam_BAR_dom,superfamily_Rho_GTPase_activation_prot,smart_BAR_dom,smart_RhoGAP_dom,pfscan_BAR_dom,pfscan_RhoGAP_dom	-	no_errors	SH3BP1	HGNC	ENSG00000100092	tier1	rs139958398	-	93	0	0.00	52	25	32.47
SH3BP1	0	genome.wustl.edu	37	22	38051313	38051314	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	38051313	38051314	0	C	INS	SH3BP1	ENST00000357436	human	ensembl	74_37	+1	known	frame_shift_ins	c.1728_1729	p.Q578fs	0.733:0.981	NULL	pfam_RhoGAP_dom,pfam_BAR_dom,superfamily_Rho_GTPase_activation_prot,smart_BAR_dom,smart_RhoGAP_dom,pfscan_BAR_dom,pfscan_RhoGAP_dom	-	no_errors	SH3BP1	HGNC	ENSG00000100092				18	0	0.00	10	4	28.57
SH3D19	0	genome.wustl.edu	37	4	152041916	152041916	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	152041916	152041916	A	-	DEL	SH3D19	ENST00000604922	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	SH3D19	HGNC	ENSG00000109686	tier1			27	0	0.00	10	7	41.18
SH3D19	0	genome.wustl.edu	37	4	152043270	152043270	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	152043270	152043270	G	T	SNP	SH3D19	ENST00000304527	human	ensembl	74_37	-1	known	missense	c.2346	p.N782K	1.000	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_p67phox,prints_SH3_domain	-	no_errors	SH3D19	HGNC	ENSG00000109686	tier1	-	-	65	0	0.00	62	4	5.97
SH3GL3	0	genome.wustl.edu	37	15	84237360	84237360	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	84237360	84237360	G	A	SNP	SH3GL3	ENST00000324537	human	ensembl	74_37	+1	known	silent	c.291	p.T97	0.006	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom	pfam_BAR_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	SH3GL3	HGNC	ENSG00000140600	tier1	-	-	32	0	0.00	20	15	42.86
SH3GL3	0	genome.wustl.edu	37	15	84287070	84287070	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	84287070	84287070	G	A	SNP	SH3GL3	ENST00000564054	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SH3GL3	HGNC	ENSG00000140600	tier1	rs113558690	-	36	0	0.00	30	19	38.78
SHANK1	0	genome.wustl.edu	37	19	51192559	51192559	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	51192559	51192559	G	-	DEL	SHANK1	ENST00000391813	human	ensembl	74_37	-1	known	frame_shift_del	c.103	p.H35fs	0.020	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_PDZ,superfamily_PDZ,superfamily_SAM/pointed,smart_PDZ,smart_SAM,pfscan_PDZ,pfscan_SAM	-	no_errors	SHANK1	HGNC	ENSG00000161681	tier1			52	0	0.00	25	15	37.50
SHANK3	0	genome.wustl.edu	37	22	51160845	51160845	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	51160845	51160845	G	C	SNP	SHANK3	ENST00000262795	human	ensembl	74_37	+1	known	missense	c.4632	p.K1544N	1.000	NULL	pfam_SAM_type1,pfam_Ankyrin_rpt,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK3	HGNC	ENSG00000251322	tier1	-	-	10	0	0.00	5	6	54.55
SHC1	0	genome.wustl.edu	37	1	154935863	154935863	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	154935863	154935863	G	-	DEL	SHC1	ENST00000490667	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SHC1	HGNC	ENSG00000160691	tier1			41	0	0.00	31	9	22.50
SHC4	0	genome.wustl.edu	37	15	49254776	49254776	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	49254776	49254776	G	A	SNP	SHC4	ENST00000332408	human	ensembl	74_37	-1	known	missense	c.437	p.P146L	0.002	NULL	pfam_PTB/PI_dom,pfam_SH2,smart_PTB/PI_dom,smart_SH2,pfscan_PTB/PI_dom,pfscan_SH2,prints_PID_Shc-like,prints_SH2	-	no_errors	SHC4	HGNC	ENSG00000185634	tier1	-	-	55	0	0.00	37	28	43.08
SHE	0	genome.wustl.edu	37	1	154474190	154474190	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	154474190	154474190	G	A	SNP	SHE	ENST00000304760	human	ensembl	74_37	-1	known	missense	c.313	p.R105C	1.000	NULL	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SHE	HGNC	ENSG00000169291				13	0	0.00	11	3	21.43
SHROOM2	0	genome.wustl.edu	37	X	9863381	9863381	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	9863381	9863381	G	A	SNP	SHROOM2	ENST00000380913	human	ensembl	74_37	+1	known	missense	c.1433	p.R478Q	0.000	NULL	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM2	HGNC	ENSG00000146950	tier1	-	-	13	0	0.00	3	12	80.00
SHROOM2	0	genome.wustl.edu	37	X	9900355	9900355	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	9900355	9900355	G	A	SNP	SHROOM2	ENST00000380913	human	ensembl	74_37	+1	known	missense	c.3032	p.R1011Q	0.007	NULL	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM2	HGNC	ENSG00000146950	tier1	-	-	18	0	0.00	0	10	100.00
SIAH3	0	genome.wustl.edu	37	13	46425732	46425732	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	46425732	46425732	T	C	SNP	SIAH3	ENST00000400405	human	ensembl	74_37	-1	known	silent	c.33	p.V11	1.000	NULL	pfam_7-in-absentia-prot_TRAF-dom,superfamily_TRAF-like	-	no_errors	SIAH3	HGNC	ENSG00000215475	tier1	-	-	60	0	0.00	46	18	28.12
SIGLEC1	0	genome.wustl.edu	37	20	3674126	3674126	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	3674126	3674126	C	T	SNP	SIGLEC1	ENST00000344754	human	ensembl	74_37	-1	known	missense	c.3476	p.R1159H	0.001	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC1	HGNC	ENSG00000088827	tier1	-	-	70	0	0.00	46	21	31.34
SIM2	0	genome.wustl.edu	37	21	38117396	38117396	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	38117396	38117396	C	A	SNP	SIM2	ENST00000290399	human	ensembl	74_37	+1	known	missense	c.1535	p.P512Q	0.636	pfam_SIM_C	pfam_SIM_C,pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	SIM2	HGNC	ENSG00000159263	tier1	-	-	42	0	0.00	23	19	45.24
SIPA1L1	0	genome.wustl.edu	37	14	72055970	72055970	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	72055970	72055970	G	A	SNP	SIPA1L1	ENST00000555818	human	ensembl	74_37	+1	known	missense	c.1381	p.A461T	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L1	HGNC	ENSG00000197555				35	0	0.00	37	4	9.76
SIRT6	0	genome.wustl.edu	37	19	4175882	4175882	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	4175882	4175882	G	A	SNP	SIRT6	ENST00000337491	human	ensembl	74_37	-1	known	missense	c.490	p.R164W	0.971	pfam_Sirtuin,pfscan_Ssirtuin_cat_dom	pfam_Sirtuin,pfscan_Ssirtuin_cat_dom	-	no_errors	SIRT6	HGNC	ENSG00000077463				12	0	0.00	6	3	33.33
SIX3	0	genome.wustl.edu	37	2	45169257	45169257	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	45169257	45169257	C	-	DEL	SIX3	ENST00000260653	human	ensembl	74_37	+1	known	frame_shift_del	c.14	p.L7fs	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	SIX3	HGNC	ENSG00000138083	tier1			65	0	0.00	26	20	43.48
SLC11A2	0	genome.wustl.edu	37	12	51390736	51390736	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	51390736	51390736	C	T	SNP	SLC11A2	ENST00000394904	human	ensembl	74_37	-1	known	missense	c.782	p.S261N	0.973	pfam_NRAMP-like,tigrfam_NRAMP-like	pfam_NRAMP-like,prints_NRAMP-like,tigrfam_NRAMP-like	-	no_errors	SLC11A2	HGNC	ENSG00000110911	tier1	-	-	56	0	0.00	56	34	37.78
SLC12A3	0	genome.wustl.edu	37	16	56926017	56926017	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	56926017	56926017	G	A	SNP	SLC12A3	ENST00000438926	human	ensembl	74_37	+1	known	silent	c.2391	p.A797	0.089	tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_AA_permease_N,prints_NaCl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A3	HGNC	ENSG00000070915	tier1	-	-	68	0	0.00	36	15	29.41
SLC12A5	0	genome.wustl.edu	37	20	44669992	44669992	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	44669992	44669992	G	A	SNP	SLC12A5	ENST00000454036	human	ensembl	74_37	+1	known	silent	c.948	p.T316	0.982	prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A5	HGNC	ENSG00000124140	tier1	-	-	54	0	0.00	39	13	25.00
SLC16A12	0	genome.wustl.edu	37	10	91196023	91196023	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	91196023	91196023	C	A	SNP	SLC16A12	ENST00000371790	human	ensembl	74_37	-1	known	missense	c.1082	p.G361V	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A12	HGNC	ENSG00000152779	tier1	-	-	34	0	0.00	21	9	30.00
SLC16A12	0	genome.wustl.edu	37	10	91203598	91203598	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	91203598	91203598	A	-	DEL	SLC16A12	ENST00000371790	human	ensembl	74_37	-1	known	frame_shift_del	c.219	p.F73fs	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A12	HGNC	ENSG00000152779	tier1			48	0	0.00	30	6	16.67
SLC16A14	0	genome.wustl.edu	37	2	230910833	230910833	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	230910833	230910833	G	T	SNP	SLC16A14	ENST00000295190	human	ensembl	74_37	-1	known	missense	c.1009	p.L337I	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A14	HGNC	ENSG00000163053	tier1	-	-	34	0	0.00	31	4	11.43
SLC16A4	0	genome.wustl.edu	37	1	110906427	110906427	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	110906427	110906427	A	-	DEL	SLC16A4	ENST00000369779	human	ensembl	74_37	-1	known	frame_shift_del	c.1425	p.F475fs	0.998	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A4	HGNC	ENSG00000168679	tier1			30	0	0.00	32	14	30.43
SLC17A2	0	genome.wustl.edu	37	6	25916975	25916975	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	25916975	25916975	T	C	SNP	SLC17A2	ENST00000377850	human	ensembl	74_37	-1	known	missense	c.868	p.T290A	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A2	HGNC	ENSG00000112337	tier1	-	-	83	0	0.00	42	23	35.38
SLC17A5	0	genome.wustl.edu	37	6	74351590	74351590	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	74351590	74351590	A	-	DEL	SLC17A5	ENST00000355773	human	ensembl	74_37	-1	known	frame_shift_del	c.349	p.Y117fs	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A5	HGNC	ENSG00000119899	tier1			86	0	0.00	50	12	19.35
SLC17A7	0	genome.wustl.edu	37	19	49934034	49934034	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	49934034	49934034	G	T	SNP	SLC17A7	ENST00000221485	human	ensembl	74_37	-1	known	silent	c.1425	p.A475	1.000	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A7	HGNC	ENSG00000104888	tier1	-	-	50	0	0.00	57	4	6.56
SLC18A3	0	genome.wustl.edu	37	10	50819809	50819809	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	50819809	50819809	C	T	SNP	SLC18A3	ENST00000374115	human	ensembl	74_37	+1	known	silent	c.1023	p.G341	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC18A3	HGNC	ENSG00000187714	tier1	-	-	31	0	0.00	16	13	44.83
SLC19A1	0	genome.wustl.edu	37	21	46951462	46951462	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	46951462	46951462	G	A	SNP	SLC19A1	ENST00000311124	human	ensembl	74_37	-1	known	missense	c.790	p.R264W	0.002	pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pirsf_Folate_carrier,tigrfam_Folate_carrier	pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pirsf_Folate_carrier,tigrfam_Folate_carrier	-	no_errors	SLC19A1	HGNC	ENSG00000173638	tier1	-	-	102	0	0.00	45	32	41.03
SLC1A4	0	genome.wustl.edu	37	2	65248232	65248232	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	65248232	65248232	C	-	DEL	SLC1A4	ENST00000234256	human	ensembl	74_37	+1	known	frame_shift_del	c.1551	p.V519fs	0.025	NULL	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A4	HGNC	ENSG00000115902	tier1			31	0	0.00	22	12	35.29
SLC20A2	0	genome.wustl.edu	37	8	42302215	42302215	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	42302215	42302215	C	T	SNP	SLC20A2	ENST00000342228	human	ensembl	74_37	-1	known	missense	c.679	p.A227T	1.000	pfam_Phos_transporter	pfam_Phos_transporter	-	no_errors	SLC20A2	HGNC	ENSG00000168575	tier1	rs140978915	-	36	0	0.00	48	15	23.81
SLC23A2	0	genome.wustl.edu	37	20	4850601	4850601	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	4850601	4850601	A	G	SNP	SLC23A2	ENST00000338244	human	ensembl	74_37	-1	known	missense	c.1201	p.C401R	1.000	pfam_Xant/urac/vitC	pfam_Xant/urac/vitC	-	no_errors	SLC23A2	HGNC	ENSG00000089057	tier1	-	-	35	0	0.00	15	9	37.50
SLC23A2	0	genome.wustl.edu	37	20	4864391	4864391	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	4864391	4864391	A	G	SNP	SLC23A2	ENST00000338244	human	ensembl	74_37	-1	known	missense	c.721	p.Y241H	1.000	pfam_Xant/urac/vitC	pfam_Xant/urac/vitC	-	no_errors	SLC23A2	HGNC	ENSG00000089057	tier1	-	-	30	0	0.00	14	15	51.72
SLC23A2	0	genome.wustl.edu	37	20	4893541	4893541	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	4893541	4893541	G	A	SNP	SLC23A2	ENST00000338244	human	ensembl	74_37	-1	known	silent	c.192	p.N64	0.610	NULL	pfam_Xant/urac/vitC	-	no_errors	SLC23A2	HGNC	ENSG00000089057	tier1	rs201503850	-	25	0	0.00	23	11	32.35
SLC25A16	0	genome.wustl.edu	37	10	70243182	70243182	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	70243182	70243182	T	-	DEL	SLC25A16	ENST00000265870	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.272	-	-	-	no_errors	SLC25A16	HGNC	ENSG00000122912	tier1			36	0	0.00	56	18	24.32
SLC25A23	0	genome.wustl.edu	37	19	6458220	6458220	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	6458220	6458220	C	T	SNP	SLC25A23	ENST00000264088	human	ensembl	74_37	-1	known	missense	c.272	p.R91Q	0.999	smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A23	HGNC	ENSG00000125648	tier1	-	-	35	0	0.00	16	7	30.43
SLC26A1	0	genome.wustl.edu	37	4	985254	985254	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	985254	985254	C	T	SNP	SLC26A1	ENST00000361661	human	ensembl	74_37	-1	known	missense	c.238	p.G80S	1.000	tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A1	HGNC	ENSG00000145217	tier1	-	-	59	0	0.00	23	8	25.81
SLC26A2	0	genome.wustl.edu	37	5	149360003	149360003	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	149360003	149360003	G	A	SNP	SLC26A2	ENST00000286298	human	ensembl	74_37	+1	known	missense	c.847	p.V283M	1.000	pfam_Sulph_transpt,tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A2	HGNC	ENSG00000155850	tier1	-	-	90	0	0.00	47	29	38.16
SLC27A3	0	genome.wustl.edu	37	1	153751860	153751860	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	153751860	153751860	C	-	DEL	SLC27A3	ENST00000368661	human	ensembl	74_37	+1	known	frame_shift_del	c.1927	p.H645fs	0.247	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	SLC27A3	HGNC	ENSG00000143554	tier1			68	0	0.00	41	27	39.71
SLC29A1	0	genome.wustl.edu	37	6	44195073	44195073	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	44195073	44195073	A	G	SNP	SLC29A1	ENST00000313248	human	ensembl	74_37	+1	known	missense	c.260	p.Q87R	1.000	superfamily_MFS_dom_general_subst_transpt	pfam_Eqnu_transpt,superfamily_MFS_dom_general_subst_transpt,prints_Eqnu_transpt,tigrfam_Eqnu_transpt	-	no_errors	SLC29A1	HGNC	ENSG00000112759	tier1	-	-	86	0	0.00	44	21	32.31
SLC29A3	0	genome.wustl.edu	37	10	73111425	73111425	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	73111425	73111425	T	-	DEL	SLC29A3	ENST00000373189	human	ensembl	74_37	+1	known	frame_shift_del	c.490	p.F165fs	1.000	NULL	pfam_Eqnu_transpt,prints_Eqnu_transpt	-	no_errors	SLC29A3	HGNC	ENSG00000198246	tier1			105	0	0.00	64	41	39.05
SLC2A4RG	0	genome.wustl.edu	37	20	62374476	62374476	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	62374476	62374476	G	-	DEL	SLC2A4RG	ENST00000473157	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC2A4RG	HGNC	ENSG00000125520	tier1			8	0	0.00	2	3	60.00
SLC32A1	0	genome.wustl.edu	37	20	37356883	37356883	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	37356883	37356883	C	A	SNP	SLC32A1	ENST00000217420	human	ensembl	74_37	+1	known	silent	c.1179	p.S393	0.996	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC32A1	HGNC	ENSG00000101438	tier1	-	-	52	0	0.00	18	12	40.00
SLC35E1	0	genome.wustl.edu	37	19	16666161	16666161	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	16666161	16666161	G	A	SNP	SLC35E1	ENST00000595753	human	ensembl	74_37	-1	known	silent	c.804	p.S268	0.328	pfam_Tpt_PEP_trans_dom,pfam_UAA	pfam_Tpt_PEP_trans_dom,pfam_DMT,pfam_UAA	-	no_errors	SLC35E1	HGNC	ENSG00000127526	tier1	-	-	81	0	0.00	36	13	26.53
SLC35E3	0	genome.wustl.edu	37	12	69145920	69145920	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	69145920	69145920	C	T	SNP	SLC35E3	ENST00000398004	human	ensembl	74_37	+1	known	missense	c.622	p.P208S	1.000	pfam_Tpt_PEP_trans_dom,pfam_DMT	pfam_Tpt_PEP_trans_dom,pfam_DMT	-	no_errors	SLC35E3	HGNC	ENSG00000175782	tier1	-	-	168	0	0.00	112	53	31.93
SLC35F1	0	genome.wustl.edu	37	6	118596719	118596719	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	118596719	118596719	C	T	SNP	SLC35F1	ENST00000360388	human	ensembl	74_37	+1	known	silent	c.735	p.S245	1.000	pfam_SLC35_F1/F2/F6,pfam_DMT	pfam_SLC35_F1/F2/F6,pfam_DMT	-	no_errors	SLC35F1	HGNC	ENSG00000196376	tier1	-	-	108	0	0.00	71	26	26.80
SLC35F5	0	genome.wustl.edu	37	2	114500277	114500278	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	114500277	114500278	AA	0	DEL	SLC35F5	ENST00000245680	human	ensembl	74_37	-1	known	frame_shift_del	c.742_741	p.F247fs	1.000:1.000	pfam_DMT	pfam_DMT	-	no_errors	SLC35F5	HGNC	ENSG00000115084				30	0	0.00	20	13	39.39
SLC35G2	0	genome.wustl.edu	37	3	136573486	136573486	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	136573486	136573486	A	-	DEL	SLC35G2	ENST00000393079	human	ensembl	74_37	+1	known	frame_shift_del	c.184	p.66fs	1.000	NULL	pfam_DMT	-	no_errors	SLC35G2	HGNC	ENSG00000168917	tier1			24	0	0.00	11	19	63.33
SLC38A8	0	genome.wustl.edu	37	16	84050327	84050327	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	84050327	84050327	A	G	SNP	SLC38A8	ENST00000299709	human	ensembl	74_37	-1	known	missense	c.959	p.V320A	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM,pfam_Tryptophan/tyrosine_permease	-	no_errors	SLC38A8	HGNC	ENSG00000166558	tier1	-	-	23	0	0.00	10	9	47.37
SLC39A4	0	genome.wustl.edu	37	8	145639157	145639157	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	145639157	145639157	G	-	DEL	SLC39A4	ENST00000301305	human	ensembl	74_37	-1	known	frame_shift_del	c.1396	p.H466fs	0.122	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A4	HGNC	ENSG00000147804	tier1			16	0	0.00	17	11	39.29
SLC39A6	0	genome.wustl.edu	37	18	33706271	33706271	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	33706271	33706271	G	T	SNP	SLC39A6	ENST00000269187	human	ensembl	74_37	-1	known	silent	c.700	p.R234	0.000	NULL	pfam_ZIP	-	no_errors	SLC39A6	HGNC	ENSG00000141424	tier1	-	-	71	0	0.00	83	5	5.68
SLC41A2	0	genome.wustl.edu	37	12	105198777	105198777	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	105198777	105198777	A	-	DEL	SLC41A2	ENST00000549713	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.849	-	-	-	no_errors	SLC41A2	HGNC	ENSG00000136052	tier1			33	0	0.00	21	11	34.38
SLC44A2	0	genome.wustl.edu	37	19	10745884	10745886	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	10745884	10745886	CTT	-	DEL	SLC44A2	ENST00000335757	human	ensembl	74_37	+1	known	in_frame_del	c.1101_1103	p.F369in_frame_del	1.000:1.000:1.000	pfam_Choline_transptr-like	pfam_Choline_transptr-like	-	no_errors	SLC44A2	HGNC	ENSG00000129353	tier1			162	0	0.00	75	67	47.18
SLC44A4	0	genome.wustl.edu	37	6	31838592	31838592	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	31838592	31838592	C	A	SNP	SLC44A4	ENST00000229729	human	ensembl	74_37	-1	known	missense	c.934	p.A312S	0.470	pfam_Choline_transptr-like	pfam_Choline_transptr-like	-	no_errors	SLC44A4	HGNC	ENSG00000204385	tier1	-	-	27	0	0.00	6	20	76.92
SLC45A4	0	genome.wustl.edu	37	8	142222358	142222358	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	142222358	142222358	G	A	SNP	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	missense	c.2239	p.P747S	1.000	NULL	superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567	tier1	-	-	36	0	0.00	19	7	26.92
SLC45A4	0	genome.wustl.edu	37	8	142264119	142264119	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	142264119	142264119	G	T	SNP	SLC45A4	ENST00000517878	human	ensembl	74_37	-1	known	silent	c.210	p.T70	0.387	superfamily_MFS_dom_general_subst_transpt	superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567	tier1	-	-	44	0	0.00	65	4	5.80
SLC45A4	0	genome.wustl.edu	37	8	142221559	142221559	+	Silent	SNP	G	G	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	142221559	142221559	G	C	SNP	SLC45A4	ENST00000024061	human	ensembl	74_37	-1	known	silent	c.2379	p.G793	0.000	NULL	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A4	HGNC	ENSG00000022567				25	0	0.00	14	5	26.32
SLC46A2	0	genome.wustl.edu	37	9	115652623	115652623	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	115652623	115652623	C	T	SNP	SLC46A2	ENST00000374228	human	ensembl	74_37	-1	known	silent	c.339	p.L113	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Tet-R_TetA/multi-R_MdtG	-	no_errors	SLC46A2	HGNC	ENSG00000119457	tier1	-	-	25	0	0.00	10	3	23.08
SLC46A3	0	genome.wustl.edu	37	13	29275067	29275067	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	29275067	29275067	C	T	SNP	SLC46A3	ENST00000475385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC46A3	HGNC	ENSG00000139508	tier1	-	-	70	0	0.00	44	72	62.07
SLC47A2	0	genome.wustl.edu	37	17	19618055	19618055	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	19618055	19618055	T	C	SNP	SLC47A2	ENST00000325411	human	ensembl	74_37	-1	known	silent	c.273	p.A91	0.001	pfam_MATE	pfam_MATE,tigrfam_MATE	-	no_errors	SLC47A2	HGNC	ENSG00000180638	tier1	-	-	37	0	0.00	10	7	41.18
SLC5A4	0	genome.wustl.edu	37	22	32625212	32625212	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	32625212	32625212	C	A	SNP	SLC5A4	ENST00000266086	human	ensembl	74_37	-1	known	missense	c.1249	p.A417S	0.999	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A4	HGNC	ENSG00000100191	tier1	-	-	108	0	0.00	68	38	35.85
SLC5A8	0	genome.wustl.edu	37	12	101603614	101603614	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	101603614	101603614	G	A	SNP	SLC5A8	ENST00000536262	human	ensembl	74_37	-1	known	missense	c.13	p.R5W	0.012	NULL	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A8	HGNC	ENSG00000256870	tier1	-	-	41	0	0.00	8	9	52.94
SLC6A13	0	genome.wustl.edu	37	12	333174	333174	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	333174	333174	A	G	SNP	SLC6A13	ENST00000343164	human	ensembl	74_37	-1	known	missense	c.1295	p.L432P	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_GABA_GAT2	-	no_errors	SLC6A13	HGNC	ENSG00000010379	tier1	-	-	39	0	0.00	53	18	25.35
SLC6A6	0	genome.wustl.edu	37	3	14489314	14489314	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	14489314	14489314	G	T	SNP	SLC6A6	ENST00000360861	human	ensembl	74_37	+1	known	nonsense	c.589	p.E197*	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_taurine	-	no_errors	SLC6A6	HGNC	ENSG00000131389				33	0	0.00	24	2	7.69
SLC7A6OS	0	genome.wustl.edu	37	16	68337955	68337955	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	68337955	68337955	G	T	SNP	SLC7A6OS	ENST00000263997	human	ensembl	74_37	-1	known	missense	c.652	p.Q218K	1.000	NULL	NULL	-	no_errors	SLC7A6OS	HGNC	ENSG00000103061	tier1	-	-	107	0	0.00	52	4	7.14
SLC7A7	0	genome.wustl.edu	37	14	23243319	23243319	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	23243319	23243319	C	T	SNP	SLC7A7	ENST00000285850	human	ensembl	74_37	-1	known	missense	c.1252	p.V418I	0.923	pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A7	HGNC	ENSG00000155465	tier1	-	-	23	0	0.00	27	7	20.59
SLC9A2	0	genome.wustl.edu	37	2	103324746	103324746	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	103324746	103324746	C	-	DEL	SLC9A2	ENST00000233969	human	ensembl	74_37	+1	known	frame_shift_del	c.2237	p.P748fs	0.000	prints_Na/H_exchanger_2	pfam_Cation/H_exchanger,prints_Na/H_exchanger_2,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A2	HGNC	ENSG00000115616	tier1			42	0	0.00	35	12	25.53
SLC9A8	0	genome.wustl.edu	37	20	48467300	48467301	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	48467300	48467301	-	T	INS	SLC9A8	ENST00000417961	human	ensembl	74_37	+1	known	frame_shift_ins	c.536_537	p.F183fs	0.284:0.189	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A8	HGNC	ENSG00000197818	tier1			18	0	0.00	13	3	18.75
SLC9A8	0	genome.wustl.edu	37	20	48467301	48467301	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	48467301	48467301	T	-	DEL	SLC9A8	ENST00000417961	human	ensembl	74_37	+1	known	frame_shift_del	c.537	p.F182fs	0.189	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A8	HGNC	ENSG00000197818	tier1			18	0	0.00	11	5	31.25
SLC9C1	0	genome.wustl.edu	37	3	112005610	112005610	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	112005610	112005610	A	-	DEL	SLC9C1	ENST00000305815	human	ensembl	74_37	-1	known	frame_shift_del	c.29	p.F10fs	0.000	NULL	pfam_Cation/H_exchanger,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	SLC9C1	HGNC	ENSG00000172139	tier1			40	0	0.00	28	9	24.32
SLCO2A1	0	genome.wustl.edu	37	3	133670083	133670083	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	133670083	133670083	A	-	DEL	SLCO2A1	ENST00000310926	human	ensembl	74_37	-1	known	frame_shift_del	c.830	p.F277fs	1.000	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO2A1	HGNC	ENSG00000174640	tier1			34	0	0.00	13	8	38.10
SLCO3A1	0	genome.wustl.edu	37	15	92690355	92690355	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	92690355	92690355	A	G	SNP	SLCO3A1	ENST00000318445	human	ensembl	74_37	+1	known	missense	c.1654	p.M552V	1.000	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO3A1	HGNC	ENSG00000176463	tier1	-	-	51	0	0.00	39	26	40.00
SLCO5A1	0	genome.wustl.edu	37	8	70617403	70617403	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	70617403	70617403	T	-	DEL	SLCO5A1	ENST00000260126	human	ensembl	74_37	-1	known	frame_shift_del	c.1485	p.K495fs	1.000	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO5A1	HGNC	ENSG00000137571	tier1			59	0	0.00	62	12	16.22
SLFN13	0	genome.wustl.edu	37	17	33767862	33767862	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	33767862	33767862	C	T	SNP	SLFN13	ENST00000285013	human	ensembl	74_37	-1	known	missense	c.2446	p.V816M	0.000	superfamily_P-loop_NTPase	pfam_ATPase_AAA-4,pfam_DUF2075,superfamily_P-loop_NTPase	-	no_errors	SLFN13	HGNC	ENSG00000154760	tier1	-	-	40	0	0.00	18	19	51.35
SLIT2	0	genome.wustl.edu	37	4	20530701	20530701	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	20530701	20530701	T	C	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	missense	c.1592	p.I531T	1.000	pfam_LRR-contain_N,smart_LRR-contain_N	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147	tier1	-	-	42	0	0.00	15	27	64.29
SLIT2	0	genome.wustl.edu	37	4	20618777	20618778	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	20618777	20618778	-	C	INS	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	frame_shift_ins	c.4092_4093	p.L1365fs	0.303:0.926	smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147	tier1			77	0	0.00	38	22	36.67
SLITRK3	0	genome.wustl.edu	37	3	164906498	164906498	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	164906498	164906498	C	T	SNP	SLITRK3	ENST00000241274	human	ensembl	74_37	-1	known	silent	c.2121	p.R707	0.998	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK3	HGNC	ENSG00000121871	tier1	-	-	28	0	0.00	10	7	41.18
SLITRK3	0	genome.wustl.edu	37	3	164907944	164907944	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	164907944	164907944	C	A	SNP	SLITRK3	ENST00000241274	human	ensembl	74_37	-1	known	missense	c.675	p.M225I	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK3	HGNC	ENSG00000121871	tier1	-	-	27	0	0.00	28	15	34.88
SLITRK5	0	genome.wustl.edu	37	13	88328551	88328551	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	88328551	88328551	C	T	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	missense	c.908	p.T303M	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300	tier1	rs113077003	-	52	0	0.00	30	30	50.00
SLTM	0	genome.wustl.edu	37	15	59182564	59182565	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	59182564	59182565	CT	-	DEL	SLTM	ENST00000380516	human	ensembl	74_37	-1	known	frame_shift_del	c.1995_1994	p.E665fs	1.000:1.000	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SLTM	HGNC	ENSG00000137776	tier1			17	0	0.00	16	5	23.81
SMAD4	0	genome.wustl.edu	37	18	48605008	48605009	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	48605008	48605009	TT	-	DEL	SMAD4	ENST00000586253	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.003	-	-	-	no_errors	SMAD4	HGNC	ENSG00000141646	tier1			22	0	0.00	10	4	28.57
SMAD5	0	genome.wustl.edu	37	5	135513613	135513614	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	135513613	135513614	AA	-	DEL	SMAD5	ENST00000514641	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.549:0.499	-	-	-	no_errors	SMAD5	HGNC	ENSG00000113658	tier1			8	0	0.00	3	2	40.00
SMARCA4	0	genome.wustl.edu	37	19	11141498	11141498	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	11141498	11141498	G	-	DEL	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	frame_shift_del	c.3475	p.L1161fs	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	tier1			70	0	0.00	46	19	29.23
SMARCAD1	0	genome.wustl.edu	37	4	95173910	95173910	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	95173910	95173910	A	-	DEL	SMARCAD1	ENST00000359052	human	ensembl	74_37	+1	known	frame_shift_del	c.1033	p.N347fs	1.000	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_UBA-like,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_CUE,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCAD1	HGNC	ENSG00000163104	tier1			32	0	0.00	37	21	36.21
SMARCD3	0	genome.wustl.edu	37	7	150938620	150938620	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	150938620	150938620	G	T	SNP	SMARCD3	ENST00000262188	human	ensembl	74_37	-1	known	silent	c.897	p.S299	0.831	pfam_SWIB_MDM2_domain,superfamily_SWIB_MDM2_domain,smart_SWIB_domain	pfam_SWIB_MDM2_domain,superfamily_SWIB_MDM2_domain,smart_SWIB_domain	-	no_errors	SMARCD3	HGNC	ENSG00000082014	tier1	-	-	69	0	0.00	62	4	5.97
SMC5	0	genome.wustl.edu	37	9	72961329	72961329	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	72961329	72961329	A	-	DEL	SMC5	ENST00000471372	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SMC5	HGNC	ENSG00000198887	tier1			13	0	0.00	1	6	85.71
SMG6	0	genome.wustl.edu	37	17	1964770	1964770	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	1964770	1964770	C	-	DEL	SMG6	ENST00000570756	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.088	-	-	-	no_errors	SMG6	HGNC	ENSG00000070366	tier1			67	0	0.00	47	18	27.69
SMG7	0	genome.wustl.edu	37	1	183515417	183515417	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	183515417	183515417	G	A	SNP	SMG7	ENST00000507469	human	ensembl	74_37	+1	known	missense	c.2549	p.R850Q	1.000	NULL	pfam_EST1	-	no_errors	SMG7	HGNC	ENSG00000116698	tier1	rs149950850	-	34	0	0.00	44	14	24.14
SMG7	0	genome.wustl.edu	37	1	183518965	183518965	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	183518965	183518965	G	T	SNP	SMG7	ENST00000507469	human	ensembl	74_37	+1	known	missense	c.2902	p.A968S	1.000	NULL	pfam_EST1	-	no_errors	SMG7	HGNC	ENSG00000116698	tier1	-	-	46	0	0.00	52	4	7.14
SMOC1	0	genome.wustl.edu	37	14	70477591	70477591	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	70477591	70477591	G	A	SNP	SMOC1	ENST00000361956	human	ensembl	74_37	+1	known	missense	c.785	p.C262Y	1.000	pfam_Thyroglobulin_1,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	pfam_Thyroglobulin_1,pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SMOC1	HGNC	ENSG00000198732	tier1	-	-	20	0	0.00	11	10	47.62
SMURF2	0	genome.wustl.edu	37	17	62602752	62602752	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	62602752	62602752	C	T	SNP	SMURF2	ENST00000262435	human	ensembl	74_37	-1	known	missense	c.59	p.C20Y	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	SMURF2	HGNC	ENSG00000108854	tier1	-	-	46	0	0.00	28	15	34.88
SMYD1	0	genome.wustl.edu	37	2	88383895	88383895	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	88383895	88383895	G	A	SNP	SMYD1	ENST00000419482	human	ensembl	74_37	+1	known	silent	c.198	p.G66	0.947	pfam_SET_dom,pfam_Znf_MYND,smart_SET_dom,pfscan_Znf_MYND	pfam_SET_dom,pfam_Znf_MYND,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_MYND	-	no_errors	SMYD1	HGNC	ENSG00000115593	tier1	-	-	54	0	0.00	31	25	44.64
SNAP47	0	genome.wustl.edu	37	1	227935790	227935790	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	227935790	227935790	G	-	DEL	SNAP47	ENST00000366759	human	ensembl	74_37	+1	known	frame_shift_del	c.488	p.G164fs	1.000	NULL	pfscan_T_SNARE_dom	-	no_errors	SNAP47	HGNC	ENSG00000143740	tier1			60	0	0.00	48	9	15.79
SNAP91	0	genome.wustl.edu	37	6	84333061	84333061	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	84333061	84333061	G	T	SNP	SNAP91	ENST00000369694	human	ensembl	74_37	-1	known	missense	c.766	p.Q256K	1.000	pfam_ANTH_dom	pfam_ANTH_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	-	no_errors	SNAP91	HGNC	ENSG00000065609				27	0	0.00	31	2	6.06
SNAPC4	0	genome.wustl.edu	37	9	139278451	139278452	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	139278451	139278452	-	G	INS	SNAPC4	ENST00000298532	human	ensembl	74_37	-1	known	frame_shift_ins	c.1454_1453	p.H485fs	1.000:1.000	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	SNAPC4	HGNC	ENSG00000165684	tier1			53	0	0.00	42	14	25.00
SNCG	0	genome.wustl.edu	37	10	88719881	88719881	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	88719881	88719881	G	T	SNP	SNCG	ENST00000372017	human	ensembl	74_37	+1	known	missense	c.287	p.R96L	0.052	pfam_Synuclein,prints_Synuclein,prints_Synuclein_gamma	pfam_Synuclein,prints_Synuclein,prints_Synuclein_gamma	-	no_errors	SNCG	HGNC	ENSG00000173267	tier1	-	-	43	0	0.00	18	14	43.75
SND1	0	genome.wustl.edu	37	7	127714589	127714589	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	127714589	127714589	C	T	SNP	SND1	ENST00000354725	human	ensembl	74_37	+1	known	silent	c.1815	p.G605	1.000	pfam_Staphylococal_nuclease_OB-fold,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Staphylococal_nuclease_OB-fold	pfam_Staphylococal_nuclease_OB-fold,pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,smart_Tudor,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Tudor,pfscan_Staphylococal_nuclease_OB-fold	-	no_errors	SND1	HGNC	ENSG00000197157	tier1	-	-	30	0	0.00	10	11	52.38
SNHG14	0	genome.wustl.edu	37	15	25332684	25332684	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	25332684	25332684	G	A	SNP	SNHG14	ENST00000546682	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078	tier1	-	-	44	0	0.00	32	8	19.51
SNHG14	0	genome.wustl.edu	37	15	25438540	25438540	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	25438540	25438540	G	A	SNP	SNHG14	ENST00000363358	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.717	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078	tier1	-	-	114	0	0.00	59	44	42.72
SNHG5	0	genome.wustl.edu	37	6	86387037	86387038	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	86387037	86387038	TT	-	DEL	SNHG5	ENST00000384338	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	SNHG5	HGNC	ENSG00000203875	tier1			49	0	0.00	33	10	23.26
SNORA72	0	genome.wustl.edu	37	8	99054504	99054504	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	99054504	99054504	T	-	DEL	SNORA72	ENST00000501016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	KB-1208A12.3	Clone_based_vega_gene	ENSG00000245970	tier1			28	0	0.00	44	11	20.00
SNORD116-10	0	genome.wustl.edu	37	15	25319288	25319291	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	25319288	25319291	TTTT	-	DEL	SNORD116-10	ENST00000363791	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.014:0.018:0.019:0.039	-	-	-	no_errors	SNORD116-10	HGNC	ENSG00000200661	tier1			39	0	0.00	30	11	26.83
SNORD116-10	0	genome.wustl.edu	37	15	25319288	25319292	+	RNA	DEL	TTTTT	TTTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTTT	TTTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	25319288	25319292	TTTTT	0	DEL	SNORD116-10	ENST00000363791	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.014:0.018:0.019:0.039:0.200	-	-	-	no_errors	SNORD116-10	HGNC	ENSG00000200661				39	0	0.00	30	11	26.83
SNORD116-30	0	genome.wustl.edu	37	15	25353432	25353434	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	25353432	25353434	AAA	-	DEL	SNORD116-30	ENST00000516468	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.009:0.012:0.012	-	-	-	no_errors	SNORD116-30	HGNC	ENSG00000252277	tier1			12	0	0.00	9	6	40.00
SNORD116-6	0	genome.wustl.edu	37	15	25310193	25310193	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	25310193	25310193	A	-	DEL	SNORD116-6	ENST00000384711	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SNORD116-6	HGNC	ENSG00000207442	tier1			113	0	0.00	40	34	45.95
SNRNP35	0	genome.wustl.edu	37	12	123950525	123950525	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	123950525	123950525	A	-	DEL	SNRNP35	ENST00000412157	human	ensembl	74_37	+1	known	frame_shift_del	c.453	p.K153fs	0.028	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SNRNP35	HGNC	ENSG00000184209	tier1			52	0	0.00	42	21	33.33
SNRNP40	0	genome.wustl.edu	37	1	31732678	31732679	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	31732678	31732679	AA	-	DEL	SNRNP40	ENST00000486941	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.040:0.034	-	-	-	no_errors	SNRNP40	HGNC	ENSG00000060688	tier1			42	0	0.00	19	19	50.00
SNRNP70	0	genome.wustl.edu	37	19	49610906	49610906	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	49610906	49610906	G	A	SNP	SNRNP70	ENST00000598441	human	ensembl	74_37	+1	known	missense	c.602	p.R201K	1.000	NULL	pfam_U1snRNP70_N,pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SNRNP70	HGNC	ENSG00000104852	tier1	-	-	71	0	0.00	37	39	50.65
SNTB2	0	genome.wustl.edu	37	16	69317976	69317976	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	69317976	69317976	C	T	SNP	SNTB2	ENST00000336278	human	ensembl	74_37	+1	known	nonsense	c.1174	p.R392*	1.000	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology	-	no_errors	SNTB2	HGNC	ENSG00000168807	tier1	-	-	104	0	0.00	27	53	66.25
SNTG1	0	genome.wustl.edu	37	8	51465618	51465618	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	51465618	51465618	C	T	SNP	SNTG1	ENST00000518864	human	ensembl	74_37	+1	known	missense	c.689	p.A230V	1.000	smart_Pleckstrin_homology	pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology	-	no_errors	SNTG1	HGNC	ENSG00000147481	tier1	-	-	51	0	0.00	43	28	39.44
SNUPN	0	genome.wustl.edu	37	15	75917121	75917121	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	75917121	75917121	T	-	DEL	SNUPN	ENST00000371091	human	ensembl	74_37	-1	known	frame_shift_del	c.56	p.N19fs	0.114	NULL	pfam_Snurportin-1_N,pirsf_Snurportin-1,pfscan_Importin-a_IBB	-	no_errors	SNUPN	HGNC	ENSG00000169371	tier1			75	0	0.00	58	22	27.50
SNX1	0	genome.wustl.edu	37	15	64424092	64424092	+	Splice_Site	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	64424092	64424092	G	A	SNP	SNX1	ENST00000559844	human	ensembl	74_37	+1	known	splice_site	c.1221+1	e11+1	1.000	-	-	-	no_errors	SNX1	HGNC	ENSG00000028528	tier1	-	-	44	0	0.00	15	10	40.00
SNX21	0	genome.wustl.edu	37	20	44470649	44470651	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	44470649	44470651	TTT	-	DEL	SNX21	ENST00000344780	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.017:0.013:0.007	-	-	-	no_errors	SNX21	HGNC	ENSG00000124104	tier1			45	0	0.00	20	10	33.33
SNX25	0	genome.wustl.edu	37	4	186267693	186267693	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	186267693	186267693	C	T	SNP	SNX25	ENST00000264694	human	ensembl	74_37	+1	known	silent	c.1698	p.C566	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox_assoc,pfam_Sorting_nexin_C,pfam_RGS_dom,pfam_Phox,superfamily_Regulat_G_prot_signal_superfam,superfamily_Phox,smart_PX_assoc_Snx13,smart_Regulat_G_prot_signal_superfam,smart_Phox,pfscan_Phox,pfscan_Phox_assoc,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	SNX25	HGNC	ENSG00000109762	tier1	-	-	82	0	0.00	58	34	36.96
SNX29P2	0	genome.wustl.edu	37	16	29415176	29415176	+	RNA	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	29415176	29415176	A	T	SNP	SNX29P2	ENST00000398878	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	SNX29P2	HGNC	ENSG00000198106	tier1	-	-	118	0	0.00	224	58	20.35
SNX31	0	genome.wustl.edu	37	8	101596401	101596401	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	101596401	101596401	T	C	SNP	SNX31	ENST00000311812	human	ensembl	74_37	-1	known	missense	c.1108	p.S370G	1.000	NULL	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX31	HGNC	ENSG00000174226	tier1	-	-	21	0	0.00	23	7	23.33
SNX32	0	genome.wustl.edu	37	11	65618607	65618607	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	65618607	65618607	G	A	SNP	SNX32	ENST00000308342	human	ensembl	74_37	+1	known	missense	c.685	p.D229N	0.993	pfam_Vps5_C,pirsf_Snx5_Snx6	pfam_Vps5_C,pfam_Phox,superfamily_Phox,pirsf_Snx5_Snx6,pfscan_Phox	-	no_errors	SNX32	HGNC	ENSG00000172803	tier1	-	-	42	0	0.00	26	12	31.58
SOCS3	0	genome.wustl.edu	37	17	76354966	76354966	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	76354966	76354966	G	A	SNP	SOCS3	ENST00000330871	human	ensembl	74_37	-1	known	missense	c.211	p.R71C	1.000	pfam_SH2,smart_SH2,pfscan_SH2	pfam_SH2,pfam_SOCS_C,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS3	HGNC	ENSG00000184557	tier1	-	-	92	0	0.00	65	40	38.10
SOCS5	0	genome.wustl.edu	37	2	46986990	46986990	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	46986990	46986990	G	A	SNP	SOCS5	ENST00000306503	human	ensembl	74_37	+1	known	missense	c.1321	p.A441T	1.000	smart_SH2,pfscan_SH2	pfam_SOCS,pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS5	HGNC	ENSG00000171150	tier1	-	-	58	0	0.00	36	22	37.93
SOGA2	0	genome.wustl.edu	37	18	8786015	8786015	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	8786015	8786015	C	T	SNP	SOGA2	ENST00000359865	human	ensembl	74_37	+1	known	missense	c.1813	p.R605W	0.453	NULL	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502	tier1	-	-	11	0	0.00	9	20	68.97
SORBS2	0	genome.wustl.edu	37	4	186583327	186583327	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	186583327	186583327	A	G	SNP	SORBS2	ENST00000284776	human	ensembl	74_37	-1	known	missense	c.25	p.S9P	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SORBS2	HGNC	ENSG00000154556	tier1	-	-	79	0	0.00	46	41	47.13
SORL1	0	genome.wustl.edu	37	11	121430341	121430341	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	121430341	121430341	G	A	SNP	SORL1	ENST00000260197	human	ensembl	74_37	+1	known	silent	c.3024	p.K1008	1.000	NULL	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642	tier1	-	-	38	0	0.00	16	13	44.83
SOX21	0	genome.wustl.edu	37	13	95364174	95364174	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	95364174	95364174	C	G	SNP	SOX21	ENST00000376945	human	ensembl	74_37	-1	known	missense	c.130	p.A44P	1.000	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_HMG_box_dom,pfam_TF_SOX,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom,prints_Antifreeze_1	-	no_errors	SOX21	HGNC	ENSG00000125285	tier1	-	-	77	0	0.00	80	23	22.33
SOX30	0	genome.wustl.edu	37	5	157065620	157065620	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	157065620	157065620	G	T	SNP	SOX30	ENST00000265007	human	ensembl	74_37	-1	known	missense	c.1498	p.P500T	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX30	HGNC	ENSG00000039600				74	0	0.00	73	5	6.41
SOX6	0	genome.wustl.edu	37	11	16339919	16339922	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	16339919	16339922	TTTT	-	DEL	SOX6	ENST00000533658	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.017:0.042:0.057:0.893	-	-	-	no_errors	SOX6	HGNC	ENSG00000110693	tier1			19	0	0.00	6	10	62.50
SP1	0	genome.wustl.edu	37	12	53777115	53777115	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	53777115	53777115	G	A	SNP	SP1	ENST00000327443	human	ensembl	74_37	+1	known	missense	c.1384	p.V462I	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP1	HGNC	ENSG00000185591	tier1	-	-	31	0	0.00	27	15	35.71
SP100	0	genome.wustl.edu	37	2	231371095	231371095	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	231371095	231371095	G	T	SNP	SP100	ENST00000340126	human	ensembl	74_37	+1	known	nonsense	c.1948	p.G650*	0.000	pfam_SAND_dom,superfamily_SAND_dom-like,smart_SAND_dom,pfscan_SAND_dom	pfam_Sp100,pfam_SAND_dom,pfam_Bromodomain,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom	-	no_errors	SP100	HGNC	ENSG00000067066				24	0	0.00	49	4	7.55
SP110	0	genome.wustl.edu	37	2	231037655	231037655	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	231037655	231037655	G	A	SNP	SP110	ENST00000258381	human	ensembl	74_37	-1	known	silent	c.1611	p.C537	0.866	superfamily_SAND_dom-like,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Sp100,pfam_SAND_dom,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom	-	no_errors	SP110	HGNC	ENSG00000135899	tier1	-	-	39	0	0.00	28	20	41.67
SP4	0	genome.wustl.edu	37	7	21469787	21469787	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	21469787	21469787	G	T	SNP	SP4	ENST00000222584	human	ensembl	74_37	+1	known	missense	c.1004	p.S335I	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP4	HGNC	ENSG00000105866	tier1	-	-	89	0	0.00	79	5	5.95
SPAG17	0	genome.wustl.edu	37	1	118539226	118539226	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	118539226	118539226	G	T	SNP	SPAG17	ENST00000336338	human	ensembl	74_37	-1	known	silent	c.4917	p.V1639	0.996	NULL	NULL	-	no_errors	SPAG17	HGNC	ENSG00000155761	tier1	-	-	29	0	0.00	49	4	7.55
SPAG4	0	genome.wustl.edu	37	20	34208642	34208642	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	34208642	34208642	G	T	SNP	SPAG4	ENST00000374273	human	ensembl	74_37	+1	known	missense	c.1114	p.G372W	1.000	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	-	no_errors	SPAG4	HGNC	ENSG00000061656	tier1	-	-	75	0	0.00	72	5	6.49
SPAG9	0	genome.wustl.edu	37	17	49075879	49075879	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	49075879	49075879	G	A	SNP	SPAG9	ENST00000262013	human	ensembl	74_37	-1	known	silent	c.1764	p.S588	0.165	NULL	pfam_JNK/Rab-associated_protein-1_N,superfamily_WD40_repeat_dom	-	no_errors	SPAG9	HGNC	ENSG00000008294	tier1	-	-	82	0	0.00	46	41	47.13
SPATA13	0	genome.wustl.edu	37	13	24876772	24876772	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	24876772	24876772	G	A	SNP	SPATA13	ENST00000382108	human	ensembl	74_37	+1	known	missense	c.3695	p.G1232D	0.445	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	SPATA13	HGNC	ENSG00000182957	tier1	-	-	45	0	0.00	46	22	32.35
SPATA2	0	genome.wustl.edu	37	20	48522909	48522909	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	48522909	48522909	G	T	SNP	SPATA2	ENST00000289431	human	ensembl	74_37	-1	known	silent	c.810	p.A270	0.999	NULL	NULL	-	no_errors	SPATA2	HGNC	ENSG00000158480	tier1	-	-	76	0	0.00	53	5	8.62
SPATA20	0	genome.wustl.edu	37	17	48625088	48625088	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	48625088	48625088	G	A	SNP	SPATA20	ENST00000006658	human	ensembl	74_37	+1	known	missense	c.85	p.G29R	0.020	NULL	pfam_DUF255,pfam_AGE/RnBP,superfamily_6-hairpin_glycosidase-like,superfamily_Thioredoxin-like_fold	-	no_errors	SPATA20	HGNC	ENSG00000006282	tier1	-	-	33	0	0.00	21	22	51.16
SPATA21	0	genome.wustl.edu	37	1	16748029	16748029	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	16748029	16748029	G	T	SNP	SPATA21	ENST00000335496	human	ensembl	74_37	-1	known	missense	c.119	p.P40Q	0.011	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	SPATA21	HGNC	ENSG00000187144	tier1	-	-	43	0	0.00	40	4	9.09
SPATA3	0	genome.wustl.edu	37	2	231867434	231867434	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	231867434	231867434	C	T	SNP	SPATA3	ENST00000424440	human	ensembl	74_37	+1	known	missense	c.509	p.A170V	0.000	NULL	NULL	-	no_errors	SPATA3	HGNC	ENSG00000173699				59	0	0.00	50	4	7.41
SPATA42	0	genome.wustl.edu	37	1	109400924	109400927	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	109400924	109400927	TTTT	-	DEL	SPATA42	ENST00000417241	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001:0.012:0.000	-	-	-	no_errors	SPATA42	HGNC	ENSG00000203897	tier1			21	0	0.00	13	7	35.00
SPATA5L1	0	genome.wustl.edu	37	15	45713277	45713277	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	45713277	45713277	G	T	SNP	SPATA5L1	ENST00000305560	human	ensembl	74_37	+1	known	missense	c.2131	p.A711S	0.438	superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	SPATA5L1	HGNC	ENSG00000171763	tier1	-	-	63	0	0.00	73	5	6.41
SPATA6	0	genome.wustl.edu	37	1	48821240	48821240	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	48821240	48821240	T	-	DEL	SPATA6	ENST00000487629	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.023	-	-	-	no_errors	SPATA6	HGNC	ENSG00000132122	tier1			11	0	0.00	8	6	42.86
SPECC1	0	genome.wustl.edu	37	17	20013849	20013849	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	20013849	20013849	C	T	SNP	SPECC1	ENST00000261503	human	ensembl	74_37	+1	known	missense	c.257	p.T86M	0.026	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1	HGNC	ENSG00000128487	tier1	-	-	42	0	0.00	16	20	55.56
SPEF2	0	genome.wustl.edu	37	5	35659190	35659190	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	35659190	35659190	G	A	SNP	SPEF2	ENST00000356031	human	ensembl	74_37	+1	known	missense	c.1048	p.V350M	0.998	NULL	pfam_DUF1042,pfam_Adenylate_kin,pfam_HATC_dom_C,superfamily_P-loop_NTPase,superfamily_CH-domain,pfscan_CH-domain	-	no_errors	SPEF2	HGNC	ENSG00000152582	tier1	-	-	48	0	0.00	65	18	21.69
SPEG	0	genome.wustl.edu	37	2	220348876	220348876	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	220348876	220348876	C	-	DEL	SPEG	ENST00000312358	human	ensembl	74_37	+1	novel	frame_shift_del	c.6691	p.Q2233fs	0.034	NULL	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	SPEG	HGNC	ENSG00000072195	tier1			58	0	0.00	34	17	33.33
SPEM1	0	genome.wustl.edu	37	17	7324849	7324849	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	7324849	7324849	C	-	DEL	SPEM1	ENST00000323675	human	ensembl	74_37	+1	known	frame_shift_del	c.855	p.L287fs	0.492	NULL	NULL	-	no_errors	SPEM1	HGNC	ENSG00000181323	tier1			36	0	0.00	27	14	34.15
SPHKAP	0	genome.wustl.edu	37	2	228882440	228882440	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	228882440	228882440	C	A	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	missense	c.3130	p.A1044S	1.000	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	tier1	-	-	21	0	0.00	13	13	50.00
SPIRE2	0	genome.wustl.edu	37	16	89920954	89920954	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	89920954	89920954	G	A	SNP	SPIRE2	ENST00000378247	human	ensembl	74_37	+1	known	silent	c.786	p.V262	0.998	NULL	superfamily_Znf_FYVE_PHD,smart_KIND	-	no_errors	SPIRE2	HGNC	ENSG00000204991	tier1	-	-	51	0	0.00	36	10	21.74
SPOCK1	0	genome.wustl.edu	37	5	136476303	136476303	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	136476303	136476303	C	T	SNP	SPOCK1	ENST00000282223	human	ensembl	74_37	-1	known	missense	c.313	p.A105T	1.000	NULL	pfam_SPARC/Testican_Ca-bd-dom,pfam_Thyroglobulin_1,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SPOCK1	HGNC	ENSG00000152377	tier1	rs151283855	-	83	0	0.00	54	32	36.78
SPOCK2	0	genome.wustl.edu	37	10	73827995	73827995	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	73827995	73827995	C	T	SNP	SPOCK2	ENST00000317376	human	ensembl	74_37	-1	known	missense	c.539	p.C180Y	1.000	pfam_Kazal_dom,smart_Kazal_dom	pfam_SPARC/Testican_Ca-bd-dom,pfam_Thyroglobulin_1,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SPOCK2	HGNC	ENSG00000107742	tier1	-	-	74	0	0.00	26	17	39.53
SPP1	0	genome.wustl.edu	37	4	88903739	88903739	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	88903739	88903739	C	T	SNP	SPP1	ENST00000395080	human	ensembl	74_37	+1	known	silent	c.636	p.N212	0.000	pfam_Osteopontin,smart_Osteopontin	pfam_Osteopontin,smart_Osteopontin,prints_Osteopontin	-	no_errors	SPP1	HGNC	ENSG00000118785	tier1	-	-	68	0	0.00	44	24	35.29
SPRED1	0	genome.wustl.edu	37	15	38545225	38545225	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	38545225	38545225	G	-	DEL	SPRED1	ENST00000561205	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	SPRED1	HGNC	ENSG00000166068	tier1			12	0	0.00	6	4	40.00
SPTA1	0	genome.wustl.edu	37	1	158623217	158623217	+	Splice_Site	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	158623217	158623217	T	C	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	splice_site	c.3037-2	e22-2	1.000	-	-	-	no_errors	SPTA1	HGNC	ENSG00000163554	tier1	-	-	36	0	0.00	25	16	39.02
SPTBN1	0	genome.wustl.edu	37	2	54891759	54891759	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	54891759	54891759	C	T	SNP	SPTBN1	ENST00000356805	human	ensembl	74_37	+1	known	missense	c.6590	p.S2197L	0.478	pirsf_Spectrin_bsu,pfscan_Pleckstrin_homology	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN1	HGNC	ENSG00000115306	tier1	-	-	29	0	0.00	23	9	28.12
SPTBN2	0	genome.wustl.edu	37	11	66458942	66458942	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	66458942	66458942	C	T	SNP	SPTBN2	ENST00000309996	human	ensembl	74_37	-1	known	missense	c.5378	p.R1793Q	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN2	HGNC	ENSG00000173898	tier1	-	-	44	0	0.00	15	12	44.44
SPTBN2	0	genome.wustl.edu	37	11	66466466	66466466	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	66466466	66466466	G	A	SNP	SPTBN2	ENST00000309996	human	ensembl	74_37	-1	known	silent	c.3864	p.H1288	0.222	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN2	HGNC	ENSG00000173898	tier1	-	-	33	0	0.00	19	15	44.12
SPTBN2	0	genome.wustl.edu	37	11	66481107	66481107	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	66481107	66481107	G	T	SNP	SPTBN2	ENST00000309996	human	ensembl	74_37	-1	known	missense	c.767	p.P256H	1.000	pirsf_Spectrin_bsu,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN2	HGNC	ENSG00000173898	tier1	-	-	105	0	0.00	118	7	5.60
SPTBN4	0	genome.wustl.edu	37	19	41055125	41055125	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	41055125	41055125	C	T	SNP	SPTBN4	ENST00000352632	human	ensembl	74_37	+1	known	missense	c.4390	p.R1464C	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN4	HGNC	ENSG00000160460	tier1	-	-	20	0	0.00	11	3	21.43
SPTBN5	0	genome.wustl.edu	37	15	42171563	42171563	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	42171563	42171563	A	G	SNP	SPTBN5	ENST00000320955	human	ensembl	74_37	-1	known	missense	c.3077	p.L1026P	0.000	smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877	tier1	-	-	62	0	0.00	39	17	30.36
SPTBN5	0	genome.wustl.edu	37	15	42185690	42185690	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	42185690	42185690	A	G	SNP	SPTBN5	ENST00000320955	human	ensembl	74_37	-1	known	silent	c.6	p.A2	0.002	NULL	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877	tier1	-	-	22	0	0.00	19	9	32.14
SRC	0	genome.wustl.edu	37	20	36033634	36033635	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	36033634	36033635	TT	-	DEL	SRC	ENST00000477066	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.070:0.027	-	-	-	no_errors	SRC	HGNC	ENSG00000197122	tier1			43	0	0.00	19	17	47.22
SRM	0	genome.wustl.edu	37	1	11115982	11115982	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	11115982	11115982	G	T	SNP	SRM	ENST00000376957	human	ensembl	74_37	-1	known	silent	c.621	p.G207	0.001	pfam_Spermidine/spermine_synthase,pfscan_Spermidine/spermine_synthase,tigrfam_Spermidine/spermine_synthase	pfam_Spermidine/spermine_synthase,pfscan_Spermidine/spermine_synthase,tigrfam_Spermidine/spermine_synthase	-	no_errors	SRM	HGNC	ENSG00000116649				59	0	0.00	35	3	7.89
SRRM2	0	genome.wustl.edu	37	16	2814067	2814069	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	2814067	2814069	CCT	-	DEL	SRRM2	ENST00000301740	human	ensembl	74_37	+1	known	in_frame_del	c.3538_3540	p.P1181in_frame_del	0.100:0.225:0.237	NULL	pfam_mRNA_splic_Cwf21	-	no_errors	SRRM2	HGNC	ENSG00000167978	tier1			13	0	0.00	7	9	56.25
SRSF6	0	genome.wustl.edu	37	20	42088772	42088772	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	42088772	42088772	C	T	SNP	SRSF6	ENST00000244020	human	ensembl	74_37	+1	known	missense	c.481	p.R161C	1.000	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_RRM_3,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SRSF6	HGNC	ENSG00000124193	tier1	-	-	44	0	0.00	31	17	35.42
SSBP3	0	genome.wustl.edu	37	1	54692427	54692427	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	54692427	54692427	A	-	DEL	SSBP3	ENST00000326956	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SSBP3	HGNC	ENSG00000157216	tier1			55	0	0.00	37	18	32.73
SSH3	0	genome.wustl.edu	37	11	67076853	67076853	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	67076853	67076853	G	T	SNP	SSH3	ENST00000531495	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	SSH3	HGNC	ENSG00000172830	tier1	-	-	61	0	0.00	62	4	6.06
SSPO	0	genome.wustl.edu	37	7	149516520	149516520	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	149516520	149516520	C	-	DEL	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.642	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1			19	0	0.00	19	7	26.92
SSTR1	0	genome.wustl.edu	37	14	38678935	38678935	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	38678935	38678935	T	C	SNP	SSTR1	ENST00000267377	human	ensembl	74_37	+1	known	missense	c.341	p.L114P	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_NPY_rcpt,prints_Neuropept_B/W_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt_1,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Opioid_rcpt,prints_NPY_rcpt,prints_Neuropept_B/W_rcpt	-	no_errors	SSTR1	HGNC	ENSG00000139874	tier1	-	-	81	0	0.00	11	21	65.62
ST14	0	genome.wustl.edu	37	11	130079458	130079458	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	130079458	130079458	C	T	SNP	ST14	ENST00000278742	human	ensembl	74_37	+1	known	silent	c.2391	p.G797	0.961	pirsf_Peptidase_S1A_matripase,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Peptidase_S1A_matripase,pfam_Peptidase_S1,pfam_LDrepeatLR_classA_rpt,pfam_CUB_dom,pfam_SEA_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,prints_LDrepeatLR_classA_rpt,prints_Peptidase_S1A,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1	-	no_errors	ST14	HGNC	ENSG00000149418	tier1	-	-	41	0	0.00	20	13	39.39
ST6GAL2	0	genome.wustl.edu	37	2	107459563	107459563	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	107459563	107459563	G	-	DEL	ST6GAL2	ENST00000361686	human	ensembl	74_37	-1	known	frame_shift_del	c.871	p.R291fs	0.371	pfam_Glyco_trans_29	pfam_Glyco_trans_29,superfamily_Glyco_hydro/deAcase_b/a-brl	-	no_errors	ST6GAL2	HGNC	ENSG00000144057	tier1			30	0	0.00	11	7	38.89
ST6GALNAC6	0	genome.wustl.edu	37	9	130653132	130653132	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	130653132	130653132	C	T	SNP	ST6GALNAC6	ENST00000291839	human	ensembl	74_37	-1	known	missense	c.488	p.R163H	0.998	pfam_Glyco_trans_29	pfam_Glyco_trans_29	-	no_errors	ST6GALNAC6	HGNC	ENSG00000160408	tier1	-	-	48	0	0.00	24	17	41.46
ST7	0	genome.wustl.edu	37	7	116660605	116660605	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	116660605	116660605	T	-	DEL	ST7	ENST00000462544	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ST7	HGNC	ENSG00000004866	tier1			25	0	0.00	15	13	46.43
STAB1	0	genome.wustl.edu	37	3	52538076	52538076	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	52538076	52538076	G	A	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	missense	c.1055	p.G352E	1.000	smart_EG-like_dom	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327	tier1	-	-	52	0	0.00	37	19	33.93
STAB1	0	genome.wustl.edu	37	3	52551565	52551565	+	Splice_Site	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	52551565	52551565	G	T	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	splice_site	c.4564-1	e44-1	1.000	-	-	-	no_errors	STAB1	HGNC	ENSG00000010327	tier1	-	-	70	0	0.00	25	13	34.21
STAB2	0	genome.wustl.edu	37	12	104015856	104015856	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	104015856	104015856	G	T	SNP	STAB2	ENST00000388887	human	ensembl	74_37	+1	known	missense	c.454	p.D152Y	0.556	smart_EGF_laminin	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_FAS1_domain,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB2	HGNC	ENSG00000136011	tier1	-	-	74	0	0.00	70	4	5.41
STAB2	0	genome.wustl.edu	37	12	104048365	104048366	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	104048365	104048366	-	A	INS	STAB2	ENST00000388887	human	ensembl	74_37	+1	known	frame_shift_ins	c.1440_1441	p.K482fs	0.998:1.000	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pfscan_FAS1_domain	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_FAS1_domain,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB2	HGNC	ENSG00000136011	tier1			58	0	0.00	26	20	43.48
STAB2	0	genome.wustl.edu	37	12	104099500	104099500	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	104099500	104099500	G	T	SNP	STAB2	ENST00000388887	human	ensembl	74_37	+1	known	missense	c.3991	p.V1331F	0.105	NULL	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_FAS1_domain,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB2	HGNC	ENSG00000136011	tier1	-	-	69	0	0.00	78	5	6.02
STAB2	0	genome.wustl.edu	37	12	104118858	104118858	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	104118858	104118858	G	T	SNP	STAB2	ENST00000388887	human	ensembl	74_37	+1	known	missense	c.4789	p.G1597C	0.999	superfamily_FAS1_domain,pfscan_FAS1_domain	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_FAS1_domain,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB2	HGNC	ENSG00000136011	tier1	-	-	61	0	0.00	59	4	6.25
STAC2	0	genome.wustl.edu	37	17	37381682	37381682	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	37381682	37381682	G	A	SNP	STAC2	ENST00000333461	human	ensembl	74_37	-1	known	missense	c.74	p.A25V	0.959	NULL	pfam_SH3_2,pfam_SH3_domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_SH3_domain,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_SH3_domain,prints_p67phox	-	no_errors	STAC2	HGNC	ENSG00000141750	tier1	-	-	74	0	0.00	26	20	43.48
STAG3L3	0	genome.wustl.edu	37	7	72470041	72470042	+	RNA	DEL	CT	CT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	72470041	72470042	CT	-	DEL	STAG3L3	ENST00000423834	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	STAG3L3	HGNC	ENSG00000174353	tier1			401	0	0.00	323	62	16.10
STAG3L4	0	genome.wustl.edu	37	7	66767611	66767613	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	66767611	66767613	TTT	-	DEL	STAG3L4	ENST00000416602	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.034:0.032:0.030	-	-	-	no_errors	STAG3L4	HGNC	ENSG00000106610	tier1			79	0	0.00	46	11	19.30
STAG3L4	0	genome.wustl.edu	37	7	66767623	66767624	+	RNA	DEL	TC	TC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	66767623	66767624	TC	-	DEL	STAG3L4	ENST00000416602	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.016:0.014	-	-	-	no_errors	STAG3L4	HGNC	ENSG00000106610	tier1			74	0	0.00	43	16	27.12
STAG3L5P-PVRIG2P-PILRB	0	genome.wustl.edu	37	7	99943553	99943554	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	99943553	99943554	TT	-	DEL	STAG3L5P-PVRIG2P-PILRB	ENST00000310771	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.003	-	-	-	no_errors	STAG3L5P-PVRIG2P-PILRB	HGNC	ENSG00000272752	tier1			18	0	0.00	15	13	46.43
STAMBPL1	0	genome.wustl.edu	37	10	90676487	90676487	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	90676487	90676487	G	T	SNP	STAMBPL1	ENST00000371927	human	ensembl	74_37	+1	known	silent	c.954	p.A318	0.002	pfam_JAB_MPN_dom,smart_JAB_MPN_dom	pfam_JAB_MPN_dom,smart_JAB_MPN_dom	-	no_errors	STAMBPL1	HGNC	ENSG00000138134	tier1	-	-	51	0	0.00	52	4	7.14
STAP2	0	genome.wustl.edu	37	19	4325468	4325468	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	4325468	4325468	G	T	SNP	STAP2	ENST00000600324	human	ensembl	74_37	-1	known	missense	c.904	p.P302T	0.011	NULL	pfscan_SH2	-	no_errors	STAP2	HGNC	ENSG00000178078				52	0	0.00	43	4	8.51
STARD9	0	genome.wustl.edu	37	15	42974345	42974345	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	42974345	42974345	G	A	SNP	STARD9	ENST00000290607	human	ensembl	74_37	+1	known	silent	c.2109	p.L703	0.187	NULL	pfam_Kinesin_motor_dom,pfam_START_lipid-bd_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_START_lipid-bd_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	STARD9	HGNC	ENSG00000159433	tier1	-	-	77	0	0.00	26	17	39.53
STAT5A	0	genome.wustl.edu	37	17	40459723	40459723	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	40459723	40459723	G	A	SNP	STAT5A	ENST00000345506	human	ensembl	74_37	+1	known	missense	c.1888	p.A630T	1.000	pfam_SH2,smart_SH2,pfscan_SH2	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT5A	HGNC	ENSG00000126561	tier1	-	-	31	0	0.00	15	9	37.50
STIL	0	genome.wustl.edu	37	1	47746485	47746485	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	47746485	47746485	C	T	SNP	STIL	ENST00000371877	human	ensembl	74_37	-1	known	missense	c.1645	p.E549K	0.925	NULL	NULL	-	no_errors	STIL	HGNC	ENSG00000123473	tier1	-	-	70	0	0.00	44	27	38.03
STK32C	0	genome.wustl.edu	37	10	134036380	134036380	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	134036380	134036380	C	T	SNP	STK32C	ENST00000368625	human	ensembl	74_37	-1	known	silent	c.1143	p.P381	0.005	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK32C	HGNC	ENSG00000165752	tier1	-	-	37	0	0.00	10	14	58.33
STRADA	0	genome.wustl.edu	37	17	61781804	61781804	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	61781804	61781804	G	-	DEL	STRADA	ENST00000336174	human	ensembl	74_37	-1	known	frame_shift_del	c.997	p.R333fs	0.626	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STRADA	HGNC	ENSG00000266173	tier1			56	0	0.00	35	10	22.22
STRADA	0	genome.wustl.edu	37	17	61781804	61781804	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	61781804	61781804	G	C	SNP	STRADA	ENST00000336174	human	ensembl	74_37	-1	known	missense	c.997	p.R333G	0.626	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STRADA	HGNC	ENSG00000266173				56	0	0.00	32	3	6.67
STT3B	0	genome.wustl.edu	37	3	31677497	31677497	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	31677497	31677497	T	C	SNP	STT3B	ENST00000295770	human	ensembl	74_37	+1	known	missense	c.2422	p.Y808H	1.000	NULL	pfam_Oligo_trans_STT3	-	no_errors	STT3B	HGNC	ENSG00000163527	tier1	-	-	52	0	0.00	31	19	38.00
STT3B	0	genome.wustl.edu	37	3	31677794	31677794	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	31677794	31677794	T	-	DEL	STT3B	ENST00000463044	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	STT3B	HGNC	ENSG00000163527	tier1			11	0	0.00	0	4	100.00
STX2	0	genome.wustl.edu	37	12	131283099	131283100	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	131283099	131283100	-	T	INS	STX2	ENST00000392373	human	ensembl	74_37	-1	known	frame_shift_ins	c.757_756	p.A252fs	1.000:0.955	pfam_T_SNARE_dom,smart_T_SNARE_dom,pfscan_T_SNARE_dom	pfam_Syntaxin_N,pfam_T_SNARE_dom,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX2	HGNC	ENSG00000111450	tier1			71	0	0.00	54	21	28.00
STXBP1	0	genome.wustl.edu	37	9	130444703	130444703	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	130444703	130444703	G	A	SNP	STXBP1	ENST00000373299	human	ensembl	74_37	+1	known	nonsense	c.1566	p.W522*	1.000	pfam_Sec1-like,superfamily_Sec1-like	pfam_Sec1-like,superfamily_Sec1-like	-	no_errors	STXBP1	HGNC	ENSG00000136854	tier1	-	-	31	0	0.00	16	15	48.39
STXBP3	0	genome.wustl.edu	37	1	109315355	109315355	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	109315355	109315355	A	-	DEL	STXBP3	ENST00000370008	human	ensembl	74_37	+1	known	frame_shift_del	c.507	p.D171fs	0.327	pfam_Sec1-like,superfamily_Sec1-like	pfam_Sec1-like,superfamily_Sec1-like	-	no_errors	STXBP3	HGNC	ENSG00000116266	tier1			31	0	0.00	19	13	40.62
SUCO	0	genome.wustl.edu	37	1	172554204	172554204	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	172554204	172554204	A	-	DEL	SUCO	ENST00000608151	human	ensembl	74_37	+1	known	frame_shift_del	c.2001	p.T669fs	1.000	NULL	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	-	no_errors	SUCO	HGNC	ENSG00000094975	tier1			42	0	0.00	68	22	24.44
SUN2	0	genome.wustl.edu	37	22	39138454	39138454	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	39138454	39138454	C	T	SNP	SUN2	ENST00000216064	human	ensembl	74_37	-1	known	missense	c.920	p.R307H	0.077	NULL	pfam_Sad1_UNC_C,superfamily_Galactose-bd-like	-	no_errors	SUN2	HGNC	ENSG00000100242	tier1	-	-	43	0	0.00	22	17	43.59
SURF6	0	genome.wustl.edu	37	9	136198675	136198675	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	136198675	136198675	C	T	SNP	SURF6	ENST00000468290	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SURF6	HGNC	ENSG00000148296	tier1	-	-	23	0	0.00	19	7	26.92
SUSD1	0	genome.wustl.edu	37	9	114860860	114860860	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	114860860	114860860	G	T	SNP	SUSD1	ENST00000374264	human	ensembl	74_37	-1	known	missense	c.1364	p.P455H	0.003	NULL	pfam_EGF-like_Ca-bd_dom,pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SUSD1	HGNC	ENSG00000106868	tier1	-	-	76	0	0.00	45	28	38.36
SUSD2	0	genome.wustl.edu	37	22	24584236	24584236	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	24584236	24584236	C	T	SNP	SUSD2	ENST00000358321	human	ensembl	74_37	+1	known	silent	c.2385	p.L795	0.515	NULL	pfam_AMOP,pfam_VWF_type-D,pfam_Sushi_SCR_CCP,pfam_Somatomedin_B_dom,superfamily_Sushi_SCR_CCP,superfamily_Ig_E-set,smart_AMOP,smart_VWF_type-D,smart_Sushi_SCR_CCP,pfscan_AMOP,pfscan_Somatomedin_B_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SUSD2	HGNC	ENSG00000099994	tier1	rs146576308	-	60	0	0.00	25	18	40.91
SUSD3	0	genome.wustl.edu	37	9	95838089	95838089	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	95838089	95838089	C	-	DEL	SUSD3	ENST00000375472	human	ensembl	74_37	+1	known	frame_shift_del	c.112	p.P39fs	0.494	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	SUSD3	HGNC	ENSG00000157303	tier1			47	0	0.00	30	12	28.57
SUSD4	0	genome.wustl.edu	37	1	223408392	223408392	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	223408392	223408392	A	T	SNP	SUSD4	ENST00000344029	human	ensembl	74_37	-1	known	missense	c.775	p.L259M	0.000	NULL	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	SUSD4	HGNC	ENSG00000143502	tier1	-	-	18	0	0.00	23	9	28.12
SUV39H1	0	genome.wustl.edu	37	X	48564745	48564745	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	48564745	48564745	C	T	SNP	SUV39H1	ENST00000453214	human	ensembl	74_37	+1	known	missense	c.461	p.T154M	0.960	NULL	NULL	-	no_errors	SUV39H1	HGNC	ENSG00000101945	tier1	rs141546891	-	52	0	0.00	11	42	79.25
SVEP1	0	genome.wustl.edu	37	9	113173449	113173449	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	113173449	113173449	T	C	SNP	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	missense	c.6542	p.E2181G	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124	tier1	-	-	84	0	0.00	50	20	28.57
SVIL	0	genome.wustl.edu	37	10	29820936	29820936	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	29820936	29820936	C	T	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	silent	c.2004	p.S668	0.003	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321	tier1	-	-	31	0	0.00	34	10	22.73
SVOPL	0	genome.wustl.edu	37	7	138333812	138333812	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	138333812	138333812	C	T	SNP	SVOPL	ENST00000288513	human	ensembl	74_37	-1	known	missense	c.149	p.R50H	1.000	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SVOPL	HGNC	ENSG00000157703				83	0	0.00	60	4	6.25
SYBU	0	genome.wustl.edu	37	8	110587964	110587964	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	110587964	110587964	A	G	SNP	SYBU	ENST00000276646	human	ensembl	74_37	-1	known	missense	c.1163	p.L388P	0.998	NULL	NULL	-	no_errors	SYBU	HGNC	ENSG00000147642	tier1	-	-	62	0	0.00	49	21	30.00
SYCP1	0	genome.wustl.edu	37	1	115537601	115537601	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	115537601	115537601	A	-	DEL	SYCP1	ENST00000369518	human	ensembl	74_37	+1	known	frame_shift_del	c.2892	p.K967fs	1.000	NULL	pfam_SCP-1	-	no_errors	SYCP1	HGNC	ENSG00000198765	tier1			35	0	0.00	23	12	34.29
SYCP2	0	genome.wustl.edu	37	20	58452519	58452519	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	58452519	58452519	T	-	DEL	SYCP2	ENST00000357552	human	ensembl	74_37	-1	known	frame_shift_del	c.3071	p.N1024fs	1.000	NULL	NULL	-	no_errors	SYCP2	HGNC	ENSG00000196074	tier1			53	0	0.00	63	21	25.00
SYCP2	0	genome.wustl.edu	37	20	58467047	58467047	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	58467047	58467047	T	-	DEL	SYCP2	ENST00000357552	human	ensembl	74_37	-1	known	frame_shift_del	c.2362	p.M788fs	0.029	NULL	NULL	-	no_errors	SYCP2	HGNC	ENSG00000196074	tier1			53	0	0.00	36	17	32.08
SYCP2L	0	genome.wustl.edu	37	6	10903158	10903158	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	10903158	10903158	A	-	DEL	SYCP2L	ENST00000283141	human	ensembl	74_37	+1	known	frame_shift_del	c.603	p.K203fs	0.010	NULL	NULL	-	no_errors	SYCP2L	HGNC	ENSG00000153157	tier1			65	0	0.00	30	26	46.43
SYN2	0	genome.wustl.edu	37	3	12225293	12225293	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	12225293	12225293	G	-	DEL	SYN2	ENST00000432424	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SYN2	HGNC	ENSG00000157152	tier1			29	0	0.00	18	12	40.00
SYN3	0	genome.wustl.edu	37	22	32924884	32924884	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	32924884	32924884	C	A	SNP	SYN3	ENST00000332840	human	ensembl	74_37	-1	known	missense	c.1207	p.A403S	0.360	NULL	pfam_Synapsin_ATP-bd_dom,pfam_Synapsin_pre-ATP-grasp_dom,pfam_Synapsin_P_site,pfam_ATP-grasp_RimK-type,superfamily_PreATP-grasp_dom,prints_Synapsin	-	no_errors	SYN3	HGNC	ENSG00000185666	tier1	-	-	13	0	0.00	8	6	42.86
SYNDIG1	0	genome.wustl.edu	37	20	24523996	24523996	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	24523996	24523996	G	A	SNP	SYNDIG1	ENST00000376862	human	ensembl	74_37	+1	known	missense	c.263	p.R88Q	0.903	NULL	pfam_CD225/Dispanin_fam	-	no_errors	SYNDIG1	HGNC	ENSG00000101463	tier1	-	-	56	0	0.00	21	23	52.27
SYNE1	0	genome.wustl.edu	37	6	152711425	152711425	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	152711425	152711425	G	T	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.8167	p.H2723N	0.003	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	103	0	0.00	122	7	5.43
SYNE2	0	genome.wustl.edu	37	14	64450606	64450606	+	Splice_Site	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	64450606	64450606	T	C	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	splice_site	c.2151+2	e17+2	1.000	-	-	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1	-	-	39	0	0.00	43	25	36.76
SYNGR4	0	genome.wustl.edu	37	19	48878957	48878957	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	48878957	48878957	G	A	SNP	SYNGR4	ENST00000344846	human	ensembl	74_37	+1	known	missense	c.419	p.S140N	0.492	pfam_Marvel,pirsf_Synaptogyrin	pfam_Marvel,pirsf_Synaptogyrin	-	no_errors	SYNGR4	HGNC	ENSG00000105467	tier1	-	-	57	0	0.00	23	11	32.35
SYNJ1	0	genome.wustl.edu	37	21	34018914	34018914	+	Splice_Site	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	34018914	34018914	T	C	SNP	SYNJ1	ENST00000433931	human	ensembl	74_37	-1	known	splice_site	c.3155-2	e24-2	0.978	-	-	-	no_errors	SYNJ1	HGNC	ENSG00000159082	tier1	-	-	17	0	0.00	17	19	52.78
SYNJ1	0	genome.wustl.edu	37	21	34029062	34029062	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	34029062	34029062	A	-	DEL	SYNJ1	ENST00000433931	human	ensembl	74_37	-1	known	frame_shift_del	c.2847	p.F949fs	0.999	pfam_DUF1866,pfscan_RRM_dom	pfam_Syja_N,pfam_Endo/exonuclease/phosphatase,pfam_DUF1866,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ1	HGNC	ENSG00000159082	tier1			35	0	0.00	32	17	34.69
SYNM	0	genome.wustl.edu	37	15	99670066	99670066	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	99670066	99670066	G	A	SNP	SYNM	ENST00000336292	human	ensembl	74_37	+1	known	missense	c.1498	p.E500K	0.339	NULL	pfam_IF	-	no_errors	SYNM	HGNC	ENSG00000182253	tier1	-	-	30	0	0.00	11	6	35.29
SYNM	0	genome.wustl.edu	37	15	99672504	99672504	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	99672504	99672504	T	C	SNP	SYNM	ENST00000336292	human	ensembl	74_37	+1	known	silent	c.3936	p.I1312	0.000	NULL	pfam_IF	-	no_errors	SYNM	HGNC	ENSG00000182253	tier1	-	-	26	0	0.00	9	6	40.00
SYNPO	0	genome.wustl.edu	37	5	150027558	150027558	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	150027558	150027558	G	A	SNP	SYNPO	ENST00000394243	human	ensembl	74_37	+1	known	silent	c.453	p.A151	0.002	NULL	NULL	-	no_errors	SYNPO	HGNC	ENSG00000171992	tier1	-	-	35	0	0.00	26	15	35.71
SYNPO2	0	genome.wustl.edu	37	4	119951528	119951528	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	119951528	119951528	C	T	SNP	SYNPO2	ENST00000307142	human	ensembl	74_37	+1	known	missense	c.1598	p.T533M	0.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SYNPO2	HGNC	ENSG00000172403	tier1	-	-	28	0	0.00	7	5	41.67
SYNPO2L	0	genome.wustl.edu	37	10	75407478	75407478	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	75407478	75407478	C	T	SNP	SYNPO2L	ENST00000394810	human	ensembl	74_37	-1	known	silent	c.1932	p.T644	0.921	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SYNPO2L	HGNC	ENSG00000166317	tier1	-	-	43	0	0.00	25	6	19.35
SYNPO2L	0	genome.wustl.edu	37	10	75415607	75415608	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	75415607	75415608	-	C	INS	SYNPO2L	ENST00000394810	human	ensembl	74_37	-1	known	frame_shift_ins	c.74_73	p.A25fs	1.000:1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SYNPO2L	HGNC	ENSG00000166317	tier1			65	0	0.00	29	24	45.28
SYT6	0	genome.wustl.edu	37	1	114680475	114680475	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	114680475	114680475	C	T	SNP	SYT6	ENST00000393296	human	ensembl	74_37	-1	known	missense	c.713	p.R238H	1.000	superfamily_C2_dom,prints_Synaptotagmin	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_dom	-	no_errors	SYT6	HGNC	ENSG00000134207	tier1	rs201154501	-	88	0	0.00	70	40	36.36
SYT7	0	genome.wustl.edu	37	11	61309776	61309776	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	61309776	61309776	C	T	SNP	SYT7	ENST00000539008	human	ensembl	74_37	-1	novel	missense	c.848	p.R283Q	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT7	HGNC	ENSG00000011347	tier1	-	-	45	0	0.00	22	23	51.11
SYTL1	0	genome.wustl.edu	37	1	27677345	27677345	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	27677345	27677345	G	A	SNP	SYTL1	ENST00000543823	human	ensembl	74_37	+1	known	missense	c.1066	p.E356K	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ	-	no_errors	SYTL1	HGNC	ENSG00000142765	tier1	-	-	41	0	0.00	24	20	45.45
SYTL2	0	genome.wustl.edu	37	11	85437604	85437604	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	85437604	85437604	G	T	SNP	SYTL2	ENST00000359152	human	ensembl	74_37	-1	known	missense	c.1468	p.P490T	0.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYTL2	HGNC	ENSG00000137501	tier1	-	-	40	0	0.00	42	4	8.70
SZT2	0	genome.wustl.edu	37	1	43909268	43909268	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	43909268	43909268	C	T	SNP	SZT2	ENST00000562955	human	ensembl	74_37	+1	known	missense	c.8455	p.R2819W	1.000	NULL	NULL	-	no_errors	SZT2	HGNC	ENSG00000198198	tier1	-	-	29	0	0.00	8	10	55.56
TAC4	0	genome.wustl.edu	37	17	47918915	47918915	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	47918915	47918915	T	-	DEL	TAC4	ENST00000334568	human	ensembl	74_37	-1	known	frame_shift_del	c.249	p.A84fs	0.021	NULL	NULL	-	no_errors	TAC4	HGNC	ENSG00000176358	tier1			219	0	0.00	164	83	33.60
TACR3	0	genome.wustl.edu	37	4	104640371	104640371	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	104640371	104640371	G	A	SNP	TACR3	ENST00000304883	human	ensembl	74_37	-1	known	silent	c.462	p.G154	0.170	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NPY_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NK3_rcpt,prints_Neurokn_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NK1_rcpt	-	no_errors	TACR3	HGNC	ENSG00000169836	tier1	-	-	53	0	0.00	20	19	48.72
TADA1	0	genome.wustl.edu	37	1	166826910	166826910	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	166826910	166826910	A	G	SNP	TADA1	ENST00000367874	human	ensembl	74_37	-1	known	missense	c.902	p.I301T	1.000	NULL	superfamily_Histone-fold	-	no_errors	TADA1	HGNC	ENSG00000152382	tier1	-	-	68	0	0.00	72	14	16.28
TADA3	0	genome.wustl.edu	37	3	9825804	9825804	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	9825804	9825804	G	A	SNP	TADA3	ENST00000301964	human	ensembl	74_37	-1	known	silent	c.1014	p.S338	0.167	pfam_Histone_AcTrfase_su3	pfam_Histone_AcTrfase_su3	-	no_errors	TADA3	HGNC	ENSG00000171148	tier1	-	-	34	0	0.00	22	18	45.00
TAF1C	0	genome.wustl.edu	37	16	84214674	84214674	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	84214674	84214674	G	-	DEL	TAF1C	ENST00000378541	human	ensembl	74_37	-1	known	frame_shift_del	c.1361	p.P454fs	0.870	NULL	superfamily_WD40_repeat_dom	-	no_errors	TAF1C	HGNC	ENSG00000103168	tier1			63	0	0.00	45	20	30.77
TAF1L	0	genome.wustl.edu	37	9	32630106	32630106	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	32630106	32630106	G	A	SNP	TAF1L	ENST00000242310	human	ensembl	74_37	-1	known	silent	c.5472	p.H1824	1.000	pirsf_TAF1_animal	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1L	HGNC	ENSG00000122728	tier1	rs202147126	-	92	0	0.00	44	31	41.33
TAF4	0	genome.wustl.edu	37	20	60582619	60582619	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	60582619	60582619	A	T	SNP	TAF4	ENST00000252996	human	ensembl	74_37	-1	known	missense	c.1958	p.L653H	1.000	pfam_TAFH_NHR1,smart_TAFH_NHR1,pfscan_TAFH_NHR1	pfam_TAF4,pfam_TAFH_NHR1,superfamily_Histone-fold,smart_TAFH_NHR1,pfscan_TAFH_NHR1	-	no_errors	TAF4	HGNC	ENSG00000130699	tier1	-	-	46	0	0.00	19	13	40.62
TAF6	0	genome.wustl.edu	37	7	99709401	99709401	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	99709401	99709401	G	A	SNP	TAF6	ENST00000344095	human	ensembl	74_37	-1	known	missense	c.850	p.R284C	1.000	superfamily_ARM-type_fold	pfam_DUF1546,pfam_TAF_TATA-bd,superfamily_Histone-fold,superfamily_ARM-type_fold,smart_TAF_TATA-bd	-	no_errors	TAF6	HGNC	ENSG00000106290	tier1	-	-	69	0	0.00	55	22	28.57
TAGLN3	0	genome.wustl.edu	37	3	111719763	111719763	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	111719763	111719763	G	A	SNP	TAGLN3	ENST00000273368	human	ensembl	74_37	+1	known	missense	c.325	p.D109N	1.000	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,prints_SM22_calponin,pfscan_CH-domain	pfam_CH-domain,pfam_Calponin_repeat,superfamily_CH-domain,smart_CH-domain,prints_SM22_calponin,pfscan_CH-domain,pfscan_Calponin_repeat	-	no_errors	TAGLN3	HGNC	ENSG00000144834	tier1	-	-	145	0	0.00	68	43	38.74
TAGLN3	0	genome.wustl.edu	37	3	111730651	111730651	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	111730651	111730651	G	T	SNP	TAGLN3	ENST00000273368	human	ensembl	74_37	+1	known	missense	c.397	p.G133C	1.000	pfam_CH-domain,superfamily_CH-domain,prints_SM22_calponin,pfscan_CH-domain	pfam_CH-domain,pfam_Calponin_repeat,superfamily_CH-domain,smart_CH-domain,prints_SM22_calponin,pfscan_CH-domain,pfscan_Calponin_repeat	-	no_errors	TAGLN3	HGNC	ENSG00000144834	tier1	-	-	65	0	0.00	46	17	26.98
TAOK1	0	genome.wustl.edu	37	17	27778671	27778671	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	27778671	27778671	C	T	SNP	TAOK1	ENST00000261716	human	ensembl	74_37	+1	known	silent	c.105	p.G35	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Homeodomain-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TAOK1	HGNC	ENSG00000160551	tier1	-	-	44	0	0.00	35	8	18.60
TAOK2	0	genome.wustl.edu	37	16	29989217	29989217	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	29989217	29989217	G	A	SNP	TAOK2	ENST00000308893	human	ensembl	74_37	+1	known	missense	c.124	p.V42I	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TAOK2	HGNC	ENSG00000149930	tier1	-	-	64	0	0.00	37	26	41.27
TAOK2	0	genome.wustl.edu	37	16	29997584	29997584	+	Splice_Site	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	29997584	29997584	A	G	SNP	TAOK2	ENST00000308893	human	ensembl	74_37	+1	known	splice_site	c.1993-2	e15-2	1.000	-	-	-	no_errors	TAOK2	HGNC	ENSG00000149930	tier1	-	-	72	0	0.00	31	15	32.61
TAP1	0	genome.wustl.edu	37	6	32818895	32818895	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	32818895	32818895	C	T	SNP	TAP1	ENST00000354258	human	ensembl	74_37	-1	known	silent	c.1056	p.T352	0.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,tigrfam_Ag_transporter2	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_ABC_B2,tigrfam_Ag_transporter2	-	no_errors	TAP1	HGNC	ENSG00000168394	tier1	-	-	39	0	0.00	5	40	88.89
TARBP1	0	genome.wustl.edu	37	1	234529164	234529164	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	234529164	234529164	C	T	SNP	TARBP1	ENST00000040877	human	ensembl	74_37	-1	novel	missense	c.4504	p.D1502N	1.000	pfam_SpoU_MeTrfase	pfam_SpoU_MeTrfase,superfamily_ARM-type_fold	-	no_errors	TARBP1	HGNC	ENSG00000059588	tier1	-	-	65	0	0.00	33	17	34.00
TARDBP	0	genome.wustl.edu	37	1	11084334	11084334	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	11084334	11084334	T	-	DEL	TARDBP	ENST00000480464	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.289	-	-	-	no_errors	TARDBP	HGNC	ENSG00000120948	tier1			12	0	0.00	10	13	56.52
TARSL2	0	genome.wustl.edu	37	15	102226169	102226169	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	102226169	102226169	C	T	SNP	TARSL2	ENST00000335968	human	ensembl	74_37	-1	known	missense	c.1417	p.E473K	1.000	pfam_aa-tRNA-synt_IIb_cons-dom,pfscan_aa-tRNA-synth_II,tigrfam_Thr-tRNA-ligase_IIa	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_TGS,pfam_tRNA_SAD,superfamily_Thr/Ala-tRNA-synth_IIc_edit,superfamily_Anticodon-bd,superfamily_TGS-like,smart_tRNA_SAD,pfscan_aa-tRNA-synth_II,prints_Thr-tRNA-ligase_IIa,tigrfam_Thr-tRNA-ligase_IIa	-	no_errors	TARSL2	HGNC	ENSG00000185418	tier1	-	-	50	0	0.00	37	22	37.29
TAS1R1	0	genome.wustl.edu	37	1	6639284	6639284	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	6639284	6639284	G	T	SNP	TAS1R1	ENST00000333172	human	ensembl	74_37	+1	known	missense	c.2166	p.E722D	0.122	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3	-	no_errors	TAS1R1	HGNC	ENSG00000173662	tier1	-	-	60	0	0.00	46	6	11.54
TAS2R64P	0	genome.wustl.edu	37	12	11230385	11230385	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	11230385	11230385	C	T	SNP	TAS2R64P	ENST00000534866	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TAS2R64P	HGNC	ENSG00000256274	tier1	-	-	76	0	0.00	84	86	50.59
TBATA	0	genome.wustl.edu	37	10	72541636	72541636	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	72541636	72541636	G	T	SNP	TBATA	ENST00000299290	human	ensembl	74_37	-1	known	silent	c.198	p.T66	1.000	NULL	NULL	-	no_errors	TBATA	HGNC	ENSG00000166220	tier1	-	-	34	0	0.00	13	19	59.38
TBC1D1	0	genome.wustl.edu	37	4	38134424	38134427	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	38134424	38134427	TTTT	-	DEL	TBC1D1	ENST00000405444	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.018:0.027:0.074:0.101	-	-	-	no_errors	TBC1D1	HGNC	ENSG00000065882	tier1			59	0	0.00	64	18	21.95
TBC1D31	0	genome.wustl.edu	37	8	124153106	124153106	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	124153106	124153106	G	T	SNP	TBC1D31	ENST00000287380	human	ensembl	74_37	+1	known	nonsense	c.2605	p.E869*	0.831	NULL	pfam_Rab-GTPase-TBC_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Rab-GTPase-TBC_dom,smart_WD40_repeat,pfscan_Rab-GTPase-TBC_dom,pfscan_WD40_repeat_dom	-	no_errors	TBC1D31	HGNC	ENSG00000156787	tier1	-	-	44	0	0.00	70	5	6.67
TBC1D31	0	genome.wustl.edu	37	8	124162324	124162324	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	124162324	124162324	C	G	SNP	TBC1D31	ENST00000287380	human	ensembl	74_37	+1	known	missense	c.3023	p.T1008S	0.113	NULL	pfam_Rab-GTPase-TBC_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Rab-GTPase-TBC_dom,smart_WD40_repeat,pfscan_Rab-GTPase-TBC_dom,pfscan_WD40_repeat_dom	-	no_errors	TBC1D31	HGNC	ENSG00000156787				34	0	0.00	45	3	6.25
TBC1D32	0	genome.wustl.edu	37	6	121412157	121412157	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	121412157	121412157	A	-	DEL	TBC1D32	ENST00000275159	human	ensembl	74_37	-1	putative	frame_shift_del	c.3619	p.W1207fs	1.000	superfamily_Rab-GTPase-TBC_dom	superfamily_Rab-GTPase-TBC_dom	-	no_errors	TBC1D32	HGNC	ENSG00000146350	tier1			35	0	0.00	20	12	37.50
TBC1D3P2	0	genome.wustl.edu	37	17	60344514	60344514	+	RNA	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	60344514	60344514	A	C	SNP	TBC1D3P2	ENST00000339120	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.980	-	-	-	no_errors	TBC1D3P2	HGNC	ENSG00000188755	tier1	-	-	333	0	0.00	184	120	39.47
TBCK	0	genome.wustl.edu	37	4	107156505	107156505	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	107156505	107156505	T	-	DEL	TBCK	ENST00000273980	human	ensembl	74_37	-1	known	frame_shift_del	c.1370	p.N457fs	1.000	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Rhodanese-like_dom,superfamily_Kinase-like_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Rhodanese-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Rab-GTPase-TBC_dom,smart_Rhodanese-like_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Prot_kinase_dom,pfscan_Rhodanese-like_dom	-	no_errors	TBCK	HGNC	ENSG00000145348	tier1			49	0	0.00	41	25	37.88
TBP	0	genome.wustl.edu	37	6	170881319	170881319	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	170881319	170881319	A	G	SNP	TBP	ENST00000230354	human	ensembl	74_37	+1	known	missense	c.986	p.Y329C	1.000	pfam_TBP	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592	tier1	-	-	16	0	0.00	21	12	36.36
TBRG1	0	genome.wustl.edu	37	11	124502084	124502084	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	124502084	124502084	C	T	SNP	TBRG1	ENST00000441174	human	ensembl	74_37	+1	known	nonsense	c.1186	p.Q396*	1.000	NULL	pfam_FYrich_N,pfam_FYrich_C,smart_FYrich_N,smart_FYrich_C	-	no_errors	TBRG1	HGNC	ENSG00000154144	tier1	-	-	71	0	0.00	57	29	33.33
TBRG4	0	genome.wustl.edu	37	7	45144171	45144171	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	45144171	45144171	C	T	SNP	TBRG4	ENST00000258770	human	ensembl	74_37	-1	known	silent	c.873	p.T291	0.000	NULL	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	TBRG4	HGNC	ENSG00000136270	tier1	-	-	31	0	0.00	20	10	33.33
TBX2	0	genome.wustl.edu	37	17	59479054	59479054	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	59479054	59479054	C	-	DEL	TBX2	ENST00000240328	human	ensembl	74_37	+1	novel	frame_shift_del	c.405	p.F138fs	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	pfam_TF_T-box,pfam_TBX,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box,prints_TF_Brachyury	-	no_errors	TBX2	HGNC	ENSG00000121068	tier1			56	0	0.00	18	11	37.93
TBX2	0	genome.wustl.edu	37	17	59485488	59485488	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	59485488	59485488	C	T	SNP	TBX2	ENST00000240328	human	ensembl	74_37	+1	novel	missense	c.1760	p.A587V	1.000	NULL	pfam_TF_T-box,pfam_TBX,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box,prints_TF_Brachyury	-	no_errors	TBX2	HGNC	ENSG00000121068	tier1	-	-	41	0	0.00	10	8	44.44
TBX3	0	genome.wustl.edu	37	12	115117754	115117754	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	115117754	115117754	G	T	SNP	TBX3	ENST00000257566	human	ensembl	74_37	-1	known	missense	c.681	p.H227Q	0.992	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box	pfam_TF_T-box,pfam_TBX,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX3	HGNC	ENSG00000135111	tier1	-	-	54	0	0.00	40	4	9.09
TBX5	0	genome.wustl.edu	37	12	114793595	114793595	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	114793595	114793595	C	-	DEL	TBX5	ENST00000310346	human	ensembl	74_37	-1	known	frame_shift_del	c.1299	p.L435fs	1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX5	HGNC	ENSG00000089225	tier1			149	0	0.00	83	41	33.06
TCEA1	0	genome.wustl.edu	37	8	54900772	54900772	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	54900772	54900772	C	T	SNP	TCEA1	ENST00000521604	human	ensembl	74_37	-1	known	missense	c.368	p.R123Q	1.000	superfamily_TFIIS_cen_dom,pirsf_TF_IIS-rel,tigrfam_TFSII	pfam_TFIIS_cen_dom,pfam_Znf_TFIIS,pfam_TFIIS_N,superfamily_TFIIS_cen_dom,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub,smart_TFS2M,smart_Znf_TFIIS,pirsf_TF_IIS-rel,pfscan_Znf_TFIIS,tigrfam_TFSII	-	no_errors	TCEA1	HGNC	ENSG00000187735	tier1	-	-	32	0	0.00	44	15	25.42
TCEAL5	0	genome.wustl.edu	37	X	102529123	102529123	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	102529123	102529123	C	-	DEL	TCEAL5	ENST00000372680	human	ensembl	74_37	-1	known	frame_shift_del	c.369	p.T124fs	0.000	pfam_TF_A-like/BEX-like	pfam_TF_A-like/BEX-like	-	no_errors	TCEAL5	HGNC	ENSG00000204065	tier1			65	0	0.00	19	44	69.84
TCEAL6	0	genome.wustl.edu	37	X	101396161	101396161	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	101396161	101396161	C	T	SNP	TCEAL6	ENST00000372773	human	ensembl	74_37	-1	known	missense	c.143	p.R48Q	0.000	pfam_TF_A-like/BEX-like	pfam_TF_A-like/BEX-like	-	no_errors	TCEAL6	HGNC	ENSG00000204071	tier1	-	-	94	0	0.00	14	61	81.33
TCEANC	0	genome.wustl.edu	37	X	13682669	13682669	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	13682669	13682669	T	-	DEL	TCEANC	ENST00000490617	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TCEANC	HGNC	ENSG00000176896	tier1			34	0	0.00	7	14	66.67
TCERG1	0	genome.wustl.edu	37	5	145886723	145886723	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	145886723	145886723	A	-	DEL	TCERG1	ENST00000296702	human	ensembl	74_37	+1	known	frame_shift_del	c.2863	p.K957fs	1.000	pfam_FF_domain,superfamily_FF_domain,smart_FF_domain	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1	HGNC	ENSG00000113649	tier1			32	0	0.00	19	19	50.00
TCF25	0	genome.wustl.edu	37	16	89951020	89951020	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	89951020	89951020	A	-	DEL	TCF25	ENST00000263346	human	ensembl	74_37	+1	known	frame_shift_del	c.385	p.K131fs	1.000	NULL	pfam_TCF25	-	no_errors	TCF25	HGNC	ENSG00000141002	tier1			46	0	0.00	34	11	24.44
TCF7L2	0	genome.wustl.edu	37	10	114925542	114925542	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	114925542	114925542	C	T	SNP	TCF7L2	ENST00000355995	human	ensembl	74_37	+1	known	silent	c.1671	p.L557	0.981	NULL	pfam_CTNNB1-bd_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TCF7L2	HGNC	ENSG00000148737				16	0	0.00	10	6	37.50
TCHH	0	genome.wustl.edu	37	1	152081168	152081168	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	152081168	152081168	G	A	SNP	TCHH	ENST00000368804	human	ensembl	74_37	-1	known	missense	c.4525	p.R1509C	0.001	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	TCHH	HGNC	ENSG00000159450	tier1	-	-	85	0	0.00	75	27	26.47
TCHH	0	genome.wustl.edu	37	1	152084242	152084242	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	152084242	152084242	C	A	SNP	TCHH	ENST00000368804	human	ensembl	74_37	-1	known	missense	c.1451	p.R484M	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	TCHH	HGNC	ENSG00000159450	tier1	-	-	201	0	0.00	140	62	30.54
TCP10	0	genome.wustl.edu	37	6	167794617	167794617	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	167794617	167794617	G	A	SNP	TCP10	ENST00000397829	human	ensembl	74_37	-1	known	missense	c.271	p.H91Y	0.000	NULL	NULL	-	no_errors	TCP10	HGNC	ENSG00000203690	tier1	-	-	33	0	0.00	24	14	36.84
TDG	0	genome.wustl.edu	37	12	104378572	104378572	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	104378572	104378572	C	T	SNP	TDG	ENST00000392872	human	ensembl	74_37	+1	known	missense	c.838	p.P280S	1.000	superfamily_Uracil-DNA_glycosylase-like,tigrfam_Thymine-DNA_glycosylase	pfam_Uracil-DNA_glycosylase-like,superfamily_Uracil-DNA_glycosylase-like,tigrfam_Thymine-DNA_glycosylase	-	no_errors	TDG	HGNC	ENSG00000139372	tier1	-	-	57	0	0.00	36	19	34.55
TDRD1	0	genome.wustl.edu	37	10	115963887	115963887	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	115963887	115963887	T	C	SNP	TDRD1	ENST00000251864	human	ensembl	74_37	+1	known	missense	c.1037	p.V346A	0.950	pfam_Tudor,smart_Tudor,pfscan_Tudor	pfam_Tudor,pfam_Znf_MYND,smart_Tudor,pfscan_Tudor,pfscan_Znf_MYND	-	no_errors	TDRD1	HGNC	ENSG00000095627	tier1	-	-	51	0	0.00	21	17	44.74
TDRD12	0	genome.wustl.edu	37	19	33301091	33301091	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	33301091	33301091	G	T	SNP	TDRD12	ENST00000444215	human	ensembl	74_37	+1	known	missense	c.2745	p.M915I	0.991	pfam_Tudor	pfam_Tudor,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase	-	no_errors	TDRD12	HGNC	ENSG00000173809	tier1	-	-	63	0	0.00	68	4	5.56
TDRD15	0	genome.wustl.edu	37	2	21362232	21362232	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	21362232	21362232	A	-	DEL	TDRD15	ENST00000405799	human	ensembl	74_37	+1	novel	frame_shift_del	c.1893	p.D634fs	0.009	NULL	pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD15	HGNC	ENSG00000218819	tier1			27	0	0.00	28	18	39.13
TDRD15	0	genome.wustl.edu	37	2	21365159	21365159	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	21365159	21365159	T	-	DEL	TDRD15	ENST00000405799	human	ensembl	74_37	+1	novel	frame_shift_del	c.4820	p.L1609fs	1.000	pfam_Tudor,smart_Tudor,pfscan_Tudor	pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD15	HGNC	ENSG00000218819	tier1			26	0	0.00	25	13	34.21
TDRD5	0	genome.wustl.edu	37	1	179620102	179620102	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	179620102	179620102	T	-	DEL	TDRD5	ENST00000444136	human	ensembl	74_37	+1	known	frame_shift_del	c.1901	p.L636fs	1.000	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD5	HGNC	ENSG00000162782	tier1			93	0	0.00	123	40	24.54
TDRKH	0	genome.wustl.edu	37	1	151753980	151753980	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	151753980	151753980	G	T	SNP	TDRKH	ENST00000368822	human	ensembl	74_37	-1	known	silent	c.208	p.R70	0.980	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,pfam_Tudor,smart_KH_dom,smart_Tudor,pfscan_Tudor,pfscan_KH_dom_type_1	-	no_errors	TDRKH	HGNC	ENSG00000182134				22	0	0.00	45	4	8.16
TEAD2	0	genome.wustl.edu	37	19	49850472	49850473	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	49850472	49850473	-	G	INS	TEAD2	ENST00000311227	human	ensembl	74_37	-1	known	frame_shift_ins	c.884_883	p.H295fs	0.971:0.961	pfam_TEA/ATTS,pirsf_TEF	pfam_TEA/ATTS,smart_TEA/ATTS,pirsf_TEF,pfscan_TEA/ATTS,prints_TEA/ATTS	-	no_errors	TEAD2	HGNC	ENSG00000074219	tier1			34	0	0.00	19	12	38.71
TEK	0	genome.wustl.edu	37	9	27158026	27158026	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	27158026	27158026	A	-	DEL	TEK	ENST00000380036	human	ensembl	74_37	+1	known	frame_shift_del	c.250	p.V86fs	1.000	pfam_Tyr_kin_Tie2_Ig-like_dom-1_N	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Tyr_kin_Tie2_Ig-like_dom-1_N,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TEK	HGNC	ENSG00000120156	tier1			95	0	0.00	95	45	32.14
TEK	0	genome.wustl.edu	37	9	27180305	27180305	+	Nonsense_Mutation	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	27180305	27180305	T	A	SNP	TEK	ENST00000380036	human	ensembl	74_37	+1	known	nonsense	c.969	p.C323*	0.995	smart_EG-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Tyr_kin_Tie2_Ig-like_dom-1_N,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TEK	HGNC	ENSG00000120156	tier1	-	-	111	0	0.00	54	53	49.53
TEK	0	genome.wustl.edu	37	9	27212888	27212888	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	27212888	27212888	A	-	DEL	TEK	ENST00000380036	human	ensembl	74_37	+1	known	frame_shift_del	c.2870	p.K958fs	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Tyr_kin_Tie2_Ig-like_dom-1_N,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TEK	HGNC	ENSG00000120156	tier1			65	0	0.00	36	18	33.33
TELO2	0	genome.wustl.edu	37	16	1545436	1545436	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	1545436	1545436	G	A	SNP	TELO2	ENST00000262319	human	ensembl	74_37	+1	known	missense	c.425	p.R142Q	0.777	NULL	pfam_Telomere_length_regulation_dom,superfamily_ARM-type_fold	-	no_errors	TELO2	HGNC	ENSG00000100726	tier1	-	-	54	0	0.00	26	16	38.10
TENM4	0	genome.wustl.edu	37	11	78369190	78369190	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	78369190	78369190	G	A	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	silent	c.8223	p.F2741	0.997	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256	tier1	-	-	28	0	0.00	12	15	55.56
TENM4	0	genome.wustl.edu	37	11	78443446	78443446	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	78443446	78443446	C	T	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	missense	c.3053	p.R1018H	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256	tier1	-	-	67	0	0.00	34	15	30.61
TENM4	0	genome.wustl.edu	37	11	78600941	78600941	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	78600941	78600941	G	A	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	missense	c.973	p.R325W	1.000	pfam_Ten_N	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256	tier1	-	-	45	0	0.00	24	13	35.14
TEX14	0	genome.wustl.edu	37	17	56700371	56700371	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	56700371	56700371	C	T	SNP	TEX14	ENST00000240361	human	ensembl	74_37	-1	known	missense	c.254	p.R85H	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	TEX14	HGNC	ENSG00000121101				22	0	0.00	31	8	20.51
TEX19	0	genome.wustl.edu	37	17	80320144	80320144	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	80320144	80320144	G	A	SNP	TEX19	ENST00000333437	human	ensembl	74_37	+1	known	missense	c.118	p.A40T	0.085	NULL	NULL	-	no_errors	TEX19	HGNC	ENSG00000182459	tier1	-	-	100	0	0.00	48	34	41.46
TFAM	0	genome.wustl.edu	37	10	60148570	60148570	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	60148570	60148570	A	-	DEL	TFAM	ENST00000487519	human	ensembl	74_37	+1	known	frame_shift_del	c.432	p.E148fs	0.006	superfamily_HMG_box_dom	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TFAM	HGNC	ENSG00000108064	tier1			36	0	0.00	28	13	31.71
TFAP2D	0	genome.wustl.edu	37	6	50712911	50712911	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	50712911	50712911	T	C	SNP	TFAP2D	ENST00000008391	human	ensembl	74_37	+1	known	silent	c.975	p.H325	1.000	pfam_TF_AP2_C	pfam_TF_AP2_C,prints_TF_AP2_C	-	no_errors	TFAP2D	HGNC	ENSG00000008197	tier1	-	-	41	0	0.00	32	20	38.46
TFG	0	genome.wustl.edu	37	3	100467227	100467227	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	100467227	100467227	G	T	SNP	TFG	ENST00000240851	human	ensembl	74_37	+1	known	missense	c.1055	p.S352I	1.000	NULL	pfam_OPR_PB1,smart_OPR_PB1	-	no_errors	TFG	HGNC	ENSG00000114354	tier1	-	-	56	0	0.00	52	4	7.14
TG	0	genome.wustl.edu	37	8	133906103	133906103	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	133906103	133906103	C	T	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	missense	c.2930	p.P977L	0.001	superfamily_Thyroglobulin_1,pirsf_Thyroglobulin	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832	tier1	-	-	86	0	0.00	50	26	34.21
TGFB1I1	0	genome.wustl.edu	37	16	31488292	31488292	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	31488292	31488292	G	A	SNP	TGFB1I1	ENST00000394863	human	ensembl	74_37	+1	known	silent	c.1080	p.A360	0.941	pfam_Znf_LIM,smart_Znf_LIM,pirsf_Leupaxin,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pirsf_Leupaxin,pfscan_Znf_LIM	-	no_errors	TGFB1I1	HGNC	ENSG00000140682	tier1	-	-	37	0	0.00	12	13	52.00
TGFBR2	0	genome.wustl.edu	37	3	30691872	30691872	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	30691872	30691872	A	-	DEL	TGFBR2	ENST00000359013	human	ensembl	74_37	+1	known	frame_shift_del	c.449	p.K153fs	1.000	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,prints_TGFB_receptor	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_TGFB_receptor,pfscan_Prot_kinase_dom	-	no_errors	TGFBR2	HGNC	ENSG00000163513	tier1			35	0	0.00	38	18	32.14
TGFBR2	0	genome.wustl.edu	37	3	30691872	30691873	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	30691872	30691873	AA	0	DEL	TGFBR2	ENST00000359013	human	ensembl	74_37	+1	known	frame_shift_del	c.449_450	p.K153fs	1.000:0.990	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,prints_TGFB_receptor	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_TGFB_receptor,pfscan_Prot_kinase_dom	-	no_errors	TGFBR2	HGNC	ENSG00000163513				35	0	0.00	35	21	37.50
TGM2	0	genome.wustl.edu	37	20	36789862	36789862	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	36789862	36789862	G	A	SNP	TGM2	ENST00000361475	human	ensembl	74_37	-1	known	silent	c.150	p.Y50	0.938	pfam_Transglutaminase_N,superfamily_Ig_E-set	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM2	HGNC	ENSG00000198959	tier1	-	-	47	0	0.00	26	32	55.17
TGOLN2	0	genome.wustl.edu	37	2	85555050	85555050	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	85555050	85555050	G	T	SNP	TGOLN2	ENST00000377386	human	ensembl	74_37	-1	known	silent	c.36	p.V12	0.138	NULL	NULL	-	no_errors	TGOLN2	HGNC	ENSG00000152291	tier1	-	-	104	0	0.00	91	7	7.14
THADA	0	genome.wustl.edu	37	2	43801837	43801837	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	43801837	43801837	G	A	SNP	THADA	ENST00000405006	human	ensembl	74_37	-1	known	missense	c.1367	p.T456M	0.068	superfamily_ARM-type_fold	pfam_DUF2428_death-receptor-like,superfamily_ARM-type_fold	-	no_errors	THADA	HGNC	ENSG00000115970	tier1	-	-	57	0	0.00	19	21	52.50
THADA	0	genome.wustl.edu	37	2	43814114	43814114	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	43814114	43814114	A	-	DEL	THADA	ENST00000405006	human	ensembl	74_37	-1	known	frame_shift_del	c.330	p.L111fs	0.055	NULL	pfam_DUF2428_death-receptor-like,superfamily_ARM-type_fold	-	no_errors	THADA	HGNC	ENSG00000115970	tier1			28	0	0.00	10	4	28.57
THAP4	0	genome.wustl.edu	37	2	242572997	242572997	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	242572997	242572997	G	A	SNP	THAP4	ENST00000407315	human	ensembl	74_37	-1	known	missense	c.575	p.A192V	0.000	NULL	pfam_DUF1794,pfam_Znf_C2CH,superfamily_Calycin-like,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP4	HGNC	ENSG00000176946	tier1	-	-	18	0	0.00	12	11	45.83
THBS3	0	genome.wustl.edu	37	1	155166890	155166890	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	155166890	155166890	G	A	SNP	THBS3	ENST00000368378	human	ensembl	74_37	-1	known	missense	c.2614	p.R872W	1.000	pfam_Thrombospondin_C,superfamily_ConA-like_lec_gl_sf	pfam_Thrombospondin_C,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	THBS3	HGNC	ENSG00000169231	tier1	-	-	97	0	0.00	75	18	19.35
THEMIS2	0	genome.wustl.edu	37	1	28208867	28208867	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	28208867	28208867	C	T	SNP	THEMIS2	ENST00000373921	human	ensembl	74_37	+1	known	silent	c.1032	p.G344	0.509	NULL	NULL	-	no_errors	THEMIS2	HGNC	ENSG00000130775	tier1	-	-	89	0	0.00	54	32	37.21
THOP1	0	genome.wustl.edu	37	19	2807603	2807603	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	2807603	2807603	C	T	SNP	THOP1	ENST00000307741	human	ensembl	74_37	+1	known	silent	c.1050	p.C350	0.910	pfam_Pept_M3A_M3B	pfam_Pept_M3A_M3B	-	no_errors	THOP1	HGNC	ENSG00000172009	tier1	-	-	67	0	0.00	24	21	46.67
THSD7A	0	genome.wustl.edu	37	7	11676257	11676257	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	11676257	11676257	A	G	SNP	THSD7A	ENST00000423059	human	ensembl	74_37	-1	known	silent	c.522	p.C174	1.000	superfamily_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7A	HGNC	ENSG00000005108	tier1	-	-	23	0	0.00	6	6	50.00
TIAL1	0	genome.wustl.edu	37	10	121335157	121335157	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	121335157	121335157	T	-	DEL	TIAL1	ENST00000463089	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.987	-	-	-	no_errors	TIAL1	HGNC	ENSG00000151923	tier1			56	0	0.00	59	18	23.38
TIAM1	0	genome.wustl.edu	37	21	32508318	32508318	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	32508318	32508318	G	A	SNP	TIAM1	ENST00000286827	human	ensembl	74_37	-1	known	silent	c.3816	p.T1272	0.565	smart_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Raf-like_ras-bd,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM1	HGNC	ENSG00000156299				57	0	0.00	59	4	6.35
TICAM1	0	genome.wustl.edu	37	19	4816464	4816465	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	4816464	4816465	-	G	INS	TICAM1	ENST00000248244	human	ensembl	74_37	-1	known	frame_shift_ins	c.1926_1925	p.P643fs	0.000:0.003	pirsf_TICAM1	superfamily_TIR_dom,pirsf_TICAM1	-	no_errors	TICAM1	HGNC	ENSG00000127666	tier1			85	0	0.00	39	12	23.53
TIE1	0	genome.wustl.edu	37	1	43772910	43772910	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	43772910	43772910	C	-	DEL	TIE1	ENST00000372476	human	ensembl	74_37	+1	known	frame_shift_del	c.738	p.P248fs	0.382	smart_EG-like_dom,pfscan_EG-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_EG-like_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TIE1	HGNC	ENSG00000066056	tier1			79	0	0.00	38	28	42.42
TIGD2	0	genome.wustl.edu	37	4	90035292	90035292	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	90035292	90035292	C	-	DEL	TIGD2	ENST00000317005	human	ensembl	74_37	+1	known	frame_shift_del	c.1167	p.P390fs	0.997	NULL	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD2	HGNC	ENSG00000180346	tier1			27	0	0.00	24	2	7.69
TIGD4	0	genome.wustl.edu	37	4	153691396	153691396	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	153691396	153691396	G	T	SNP	TIGD4	ENST00000304337	human	ensembl	74_37	-1	known	missense	c.761	p.A254D	1.000	pfam_DDE_SF_endonuclease_CENPB-like	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,pfam_Centromere_CenpB_dimerisation,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD4	HGNC	ENSG00000169989	tier1	-	-	78	0	0.00	62	4	6.06
TIGD7	0	genome.wustl.edu	37	16	3349612	3349612	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	3349612	3349612	T	C	SNP	TIGD7	ENST00000268674	human	ensembl	74_37	-1	known	missense	c.1003	p.I335V	0.999	pfam_DDE_SF_endonuclease_CENPB-like	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD7	HGNC	ENSG00000140993	tier1	-	-	29	0	0.00	15	5	25.00
TIMM13	0	genome.wustl.edu	37	19	2426965	2426965	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	2426965	2426965	C	A	SNP	TIMM13	ENST00000215570	human	ensembl	74_37	-1	known	missense	c.269	p.R90L	1.000	superfamily_Tim10/DDP_fam_Znf	pfam_Tim10/DDP_fam_Znf,superfamily_Tim10/DDP_fam_Znf	-	no_errors	TIMM13	HGNC	ENSG00000099800	tier1	-	-	169	0	0.00	121	8	6.20
TIMP4	0	genome.wustl.edu	37	3	12198914	12198914	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	12198914	12198914	T	-	DEL	TIMP4	ENST00000287814	human	ensembl	74_37	-1	known	frame_shift_del	c.208	p.M70fs	1.000	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP,pfscan_Netrin_domain	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP,pfscan_Netrin_domain	-	no_errors	TIMP4	HGNC	ENSG00000157150	tier1			105	0	0.00	54	19	26.03
TLE1	0	genome.wustl.edu	37	9	84208174	84208174	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	84208174	84208174	G	A	SNP	TLE1	ENST00000376499	human	ensembl	74_37	-1	known	silent	c.1347	p.H449	1.000	superfamily_WD40_repeat_dom	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Groucho_enhance	-	no_errors	TLE1	HGNC	ENSG00000196781	tier1	-	-	72	0	0.00	44	4	8.33
TLK1	0	genome.wustl.edu	37	2	172016964	172016964	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	172016964	172016964	C	-	DEL	TLK1	ENST00000413010	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	TLK1	HGNC	ENSG00000198586	tier1			66	0	0.00	37	22	37.29
TLK2	0	genome.wustl.edu	37	17	60637441	60637441	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	60637441	60637441	G	A	SNP	TLK2	ENST00000326270	human	ensembl	74_37	+1	known	missense	c.785	p.R262Q	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TLK2	HGNC	ENSG00000146872				55	0	0.00	56	6	9.68
TLL1	0	genome.wustl.edu	37	4	166946529	166946529	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	166946529	166946529	C	T	SNP	TLL1	ENST00000061240	human	ensembl	74_37	+1	known	silent	c.1104	p.G368	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pirsf_BMP_1/tolloid-like,pfscan_CUB_dom	pfam_CUB_dom,pfam_Peptidase_M12A,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,smart_Peptidase_Metallo,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_BMP_1/tolloid-like,pfscan_CUB_dom,pfscan_EG-like_dom,prints_Peptidase_M12A	-	no_errors	TLL1	HGNC	ENSG00000038295	tier1	-	-	64	0	0.00	43	21	32.81
TLR4	0	genome.wustl.edu	37	9	120476462	120476462	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	120476462	120476462	G	T	SNP	TLR4	ENST00000355622	human	ensembl	74_37	+1	known	missense	c.2056	p.D686Y	0.990	pirsf_Toll-like_receptor,pfam_TIR_dom,superfamily_TIR_dom,smart_TIR_dom,pfscan_TIR_dom	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR4	HGNC	ENSG00000136869	tier1	-	-	66	0	0.00	52	28	35.00
TM6SF1	0	genome.wustl.edu	37	15	83805312	83805312	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	83805312	83805312	T	-	DEL	TM6SF1	ENST00000379386	human	ensembl	74_37	+1	known	frame_shift_del	c.1010	p.L339fs	0.172	pfam_Transmembrane_6/97	pfam_Transmembrane_6/97	-	no_errors	TM6SF1	HGNC	ENSG00000136404	tier1			33	0	0.00	20	12	37.50
TM7SF3	0	genome.wustl.edu	37	12	27127036	27127037	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	27127036	27127037	CT	-	DEL	TM7SF3	ENST00000343028	human	ensembl	74_37	-1	known	frame_shift_del	c.1575_1574	p.E525fs	0.999:1.000	NULL	NULL	-	no_errors	TM7SF3	HGNC	ENSG00000064115	tier1			101	0	0.00	139	38	21.47
TM7SF3	0	genome.wustl.edu	37	12	27152717	27152717	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	27152717	27152717	A	-	DEL	TM7SF3	ENST00000539399	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TM7SF3	HGNC	ENSG00000064115	tier1			22	0	0.00	9	17	65.38
TM9SF2	0	genome.wustl.edu	37	13	100181733	100181735	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	100181733	100181735	AAG	-	DEL	TM9SF2	ENST00000376387	human	ensembl	74_37	+1	known	in_frame_del	c.346_348	p.K117in_frame_del	1.000:1.000:0.993	pfam_EMP70	pfam_EMP70	-	no_errors	TM9SF2	HGNC	ENSG00000125304	tier1			69	0	0.00	101	30	22.90
TMA16	0	genome.wustl.edu	37	4	164435265	164435265	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	164435265	164435265	A	-	DEL	TMA16	ENST00000358572	human	ensembl	74_37	+1	known	frame_shift_del	c.194	p.K67fs	0.343	pfam_Tma16	pfam_Tma16	-	no_errors	TMA16	HGNC	ENSG00000198498	tier1			52	0	0.00	32	15	31.91
TMBIM4	0	genome.wustl.edu	37	12	66531937	66531937	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	66531937	66531937	A	-	DEL	TMBIM4	ENST00000358230	human	ensembl	74_37	-1	known	frame_shift_del	c.520	p.Y174fs	0.028	pfam_Bax_inhibitor_1-related	pfam_Bax_inhibitor_1-related	-	no_errors	TMBIM4	HGNC	ENSG00000155957	tier1			17	0	0.00	5	14	73.68
TMC3	0	genome.wustl.edu	37	15	81636316	81636316	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	81636316	81636316	C	T	SNP	TMC3	ENST00000359440	human	ensembl	74_37	-1	known	missense	c.1589	p.R530Q	1.000	pfam_TMC	pfam_TMC	-	no_errors	TMC3	HGNC	ENSG00000188869	tier1	-	-	25	0	0.00	21	8	27.59
TMCO2	0	genome.wustl.edu	37	1	40717178	40717178	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	40717178	40717178	C	T	SNP	TMCO2	ENST00000372766	human	ensembl	74_37	+1	known	missense	c.461	p.T154M	0.000	NULL	NULL	-	no_errors	TMCO2	HGNC	ENSG00000188800	tier1	-	-	8	0	0.00	11	4	26.67
TMEM116	0	genome.wustl.edu	37	12	112450930	112450930	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	112450930	112450930	G	A	SNP	TMEM116	ENST00000552839	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TMEM116	HGNC	ENSG00000198270	tier1	-	-	39	0	0.00	16	17	51.52
TMEM119	0	genome.wustl.edu	37	12	108985490	108985490	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	108985490	108985490	C	T	SNP	TMEM119	ENST00000392806	human	ensembl	74_37	-1	known	missense	c.670	p.V224I	0.000	NULL	NULL	-	no_errors	TMEM119	HGNC	ENSG00000183160	tier1	-	-	57	0	0.00	31	19	38.00
TMEM132A	0	genome.wustl.edu	37	11	60704054	60704054	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	60704054	60704054	C	T	SNP	TMEM132A	ENST00000005286	human	ensembl	74_37	+1	known	missense	c.2750	p.P917L	0.000	NULL	NULL	-	no_errors	TMEM132A	HGNC	ENSG00000006118	tier1	-	-	22	0	0.00	12	4	25.00
TMEM132B	0	genome.wustl.edu	37	12	126138151	126138151	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	126138151	126138151	C	T	SNP	TMEM132B	ENST00000299308	human	ensembl	74_37	+1	known	missense	c.2132	p.S711L	0.856	NULL	NULL	-	no_errors	TMEM132B	HGNC	ENSG00000139364	tier1	-	-	69	0	0.00	44	28	38.36
TMEM132C	0	genome.wustl.edu	37	12	128899735	128899735	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	128899735	128899735	C	T	SNP	TMEM132C	ENST00000435159	human	ensembl	74_37	+1	known	missense	c.544	p.R182W	0.030	NULL	NULL	-	no_errors	TMEM132C	HGNC	ENSG00000181234	tier1	-	-	45	0	0.00	17	16	48.48
TMEM14C	0	genome.wustl.edu	37	6	10731012	10731012	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	10731012	10731012	A	-	DEL	TMEM14C	ENST00000467415	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TMEM14C	HGNC	ENSG00000111843	tier1			14	0	0.00	8	3	27.27
TMEM180	0	genome.wustl.edu	37	10	104235656	104235656	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	104235656	104235656	C	T	SNP	TMEM180	ENST00000238936	human	ensembl	74_37	+1	known	missense	c.1469	p.T490M	0.993	NULL	superfamily_MFS_dom_general_subst_transpt	-	no_errors	TMEM180	HGNC	ENSG00000138111	tier1	-	-	49	0	0.00	21	13	38.24
TMEM200B	0	genome.wustl.edu	37	1	29447499	29447499	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	29447499	29447499	C	T	SNP	TMEM200B	ENST00000420504	human	ensembl	74_37	-1	known	missense	c.842	p.R281Q	1.000	NULL	pfam_DUF2371_TMEM200	-	no_errors	TMEM200B	HGNC	ENSG00000253304	tier1	-	-	42	0	0.00	27	5	15.62
TMEM201	0	genome.wustl.edu	37	1	9670669	9670669	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	9670669	9670669	G	A	SNP	TMEM201	ENST00000340381	human	ensembl	74_37	+1	known	missense	c.1571	p.R524H	1.000	NULL	pfam_DUF2448,pfam_Ima1_N	-	no_errors	TMEM201	HGNC	ENSG00000188807	tier1	-	-	28	0	0.00	14	12	46.15
TMEM241	0	genome.wustl.edu	37	18	20932195	20932195	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	20932195	20932195	G	T	SNP	TMEM241	ENST00000383233	human	ensembl	74_37	-1	known	missense	c.730	p.P244T	0.998	NULL	NULL	-	no_errors	TMEM241	HGNC	ENSG00000134490	tier1	-	-	61	0	0.00	58	5	7.94
TMEM254	0	genome.wustl.edu	37	10	81850737	81850737	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	81850737	81850737	G	T	SNP	TMEM254	ENST00000463029	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TMEM254	HGNC	ENSG00000133678	tier1	-	-	55	0	0.00	50	4	7.41
TMEM39A	0	genome.wustl.edu	37	3	119176962	119176962	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	119176962	119176962	A	-	DEL	TMEM39A	ENST00000319172	human	ensembl	74_37	-1	known	frame_shift_del	c.239	p.F80fs	1.000	pfam_Uncharacterised_TMEM39	pfam_Uncharacterised_TMEM39	-	no_errors	TMEM39A	HGNC	ENSG00000176142	tier1			15	0	0.00	14	7	33.33
TMEM50A	0	genome.wustl.edu	37	1	25667024	25667024	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	25667024	25667024	G	-	DEL	TMEM50A	ENST00000374358	human	ensembl	74_37	+1	known	frame_shift_del	c.47	p.E18fs	1.000	pfam_UPF0220	pfam_UPF0220	-	no_errors	TMEM50A	HGNC	ENSG00000183726	tier1			127	0	0.00	90	45	33.33
TMEM50A	0	genome.wustl.edu	37	1	25687244	25687244	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	25687244	25687244	T	-	DEL	TMEM50A	ENST00000480937	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TMEM50A	HGNC	ENSG00000183726	tier1			34	0	0.00	22	10	31.25
TMEM51	0	genome.wustl.edu	37	1	15546112	15546112	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	15546112	15546112	A	G	SNP	TMEM51	ENST00000376008	human	ensembl	74_37	+1	known	missense	c.635	p.H212R	1.000	NULL	NULL	-	no_errors	TMEM51	HGNC	ENSG00000171729	tier1	-	-	25	0	0.00	16	6	27.27
TMEM51	0	genome.wustl.edu	37	1	15545853	15545853	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	15545853	15545853	G	T	SNP	TMEM51	ENST00000376008	human	ensembl	74_37	+1	known	missense	c.376	p.A126S	0.017	NULL	NULL	-	no_errors	TMEM51	HGNC	ENSG00000171729				45	0	0.00	35	3	7.89
TMEM55A	0	genome.wustl.edu	37	8	92008950	92008950	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	92008950	92008950	G	A	SNP	TMEM55A	ENST00000285419	human	ensembl	74_37	-1	known	missense	c.562	p.P188S	1.000	pfam_Transmembrane_protein_55A/B	pfam_Transmembrane_protein_55A/B	-	no_errors	TMEM55A	HGNC	ENSG00000155099	tier1	-	-	18	0	0.00	33	13	27.08
TMEM63C	0	genome.wustl.edu	37	14	77685187	77685187	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	77685187	77685187	G	-	DEL	TMEM63C	ENST00000298351	human	ensembl	74_37	+1	known	frame_shift_del	c.31	p.G12fs	0.000	NULL	pfam_DUF221	-	no_errors	TMEM63C	HGNC	ENSG00000165548	tier1			62	0	0.00	29	16	35.56
TMEM70	0	genome.wustl.edu	37	8	74891018	74891018	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	74891018	74891018	C	T	SNP	TMEM70	ENST00000312184	human	ensembl	74_37	+1	known	nonsense	c.238	p.R80*	0.599	NULL	pfam_DUF1301_TMEM70	-	no_errors	TMEM70	HGNC	ENSG00000175606	tier1	-	-	80	0	0.00	87	34	28.10
TMEM87B	0	genome.wustl.edu	37	2	112824589	112824590	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	112824589	112824590	0	A	INS	TMEM87B	ENST00000283206	human	ensembl	74_37	+1	known	frame_shift_ins	c.395_396	p.N134fs	1.000:1.000	NULL	pfam_TM_rcpt_euk	-	no_errors	TMEM87B	HGNC	ENSG00000153214				57	0	0.00	54	7	11.48
TMEM8A	0	genome.wustl.edu	37	16	427458	427458	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	427458	427458	C	T	SNP	TMEM8A	ENST00000431232	human	ensembl	74_37	-1	known	missense	c.427	p.V143I	0.001	NULL	pfam_DUF3522,pfscan_EG-like_dom	-	no_errors	TMEM8A	HGNC	ENSG00000129925	tier1	-	-	51	0	0.00	42	5	10.64
TMIE	0	genome.wustl.edu	37	3	46751073	46751073	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	46751073	46751073	T	G	SNP	TMIE	ENST00000326431	human	ensembl	74_37	+1	known	missense	c.366	p.D122E	0.011	NULL	NULL	-	no_errors	TMIE	HGNC	ENSG00000181585				27	0	0.00	17	3	15.00
TMOD1	0	genome.wustl.edu	37	9	100353670	100353670	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	100353670	100353670	G	T	SNP	TMOD1	ENST00000259365	human	ensembl	74_37	+1	known	missense	c.968	p.G323V	1.000	NULL	pfam_Tropomodulin	-	no_errors	TMOD1	HGNC	ENSG00000136842	tier1	-	-	55	0	0.00	59	4	6.35
TMPO	0	genome.wustl.edu	37	12	98921672	98921672	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	98921672	98921672	A	-	DEL	TMPO	ENST00000266732	human	ensembl	74_37	+1	known	frame_shift_del	c.288	p.T99fs	1.000	NULL	pfam_LAP2alpha,pfam_LEM-like_dom,pfam_LEM_dom,superfamily_LEM/LEM-like_dom,smart_LEM_dom,pfscan_LEM_dom,pfscan_LEM-like_dom	-	no_errors	TMPO	HGNC	ENSG00000120802	tier1			69	0	0.00	47	32	40.51
TMPO	0	genome.wustl.edu	37	12	98927535	98927535	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	98927535	98927535	A	T	SNP	TMPO	ENST00000266732	human	ensembl	74_37	+1	known	missense	c.1500	p.K500N	1.000	pfam_LAP2alpha	pfam_LAP2alpha,pfam_LEM-like_dom,pfam_LEM_dom,superfamily_LEM/LEM-like_dom,smart_LEM_dom,pfscan_LEM_dom,pfscan_LEM-like_dom	-	no_errors	TMPO	HGNC	ENSG00000120802	tier1	-	-	27	0	0.00	25	22	46.81
TMPRSS11A	0	genome.wustl.edu	37	4	68810346	68810346	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	68810346	68810346	T	-	DEL	TMPRSS11A	ENST00000334830	human	ensembl	74_37	-1	known	frame_shift_del	c.143	p.K48fs	0.055	pfam_SEA_dom,pirsf_Pept_S1A_HAT/DESC1	pfam_Peptidase_S1,pfam_SEA_dom,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pirsf_Pept_S1A_HAT/DESC1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS11A	HGNC	ENSG00000187054	tier1			75	0	0.00	43	21	32.81
TNC	0	genome.wustl.edu	37	9	117848231	117848231	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	117848231	117848231	G	T	SNP	TNC	ENST00000350763	human	ensembl	74_37	-1	known	silent	c.1779	p.S593	0.956	smart_EG-like_dom	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNC	HGNC	ENSG00000041982	tier1	-	-	39	0	0.00	26	4	13.33
TNFAIP3	0	genome.wustl.edu	37	6	138202351	138202351	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	138202351	138202351	C	-	DEL	TNFAIP3	ENST00000237289	human	ensembl	74_37	+1	known	frame_shift_del	c.2268	p.K759fs	0.609	pfam_Znf_A20,smart_Znf_A20,pfscan_Znf_A20	pfam_Znf_A20,pfam_OTU,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	TNFAIP3	HGNC	ENSG00000118503	tier1			60	0	0.00	34	17	33.33
TNFRSF10A	0	genome.wustl.edu	37	8	23054712	23054712	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	23054712	23054712	C	T	SNP	TNFRSF10A	ENST00000221132	human	ensembl	74_37	-1	known	silent	c.1020	p.P340	0.000	pirsf_TNFR_10	pirsf_TNFR_10,pfam_Death_domain,pfam_TNFR/NGFR_Cys_rich_reg,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,prints_TNFR_10,pfscan_Death_domain,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	TNFRSF10A	HGNC	ENSG00000104689	tier1	-	-	102	0	0.00	73	18	19.78
TNFRSF14	0	genome.wustl.edu	37	1	2489215	2489215	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	2489215	2489215	G	A	SNP	TNFRSF14	ENST00000355716	human	ensembl	74_37	+1	known	silent	c.120	p.P40	0.000	NULL	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_14,prints_Fas_rcpt	-	no_errors	TNFRSF14	HGNC	ENSG00000157873	tier1	rs150605790	-	60	0	0.00	34	23	40.35
TNFRSF25	0	genome.wustl.edu	37	1	6522195	6522195	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	6522195	6522195	G	T	SNP	TNFRSF25	ENST00000377782	human	ensembl	74_37	-1	known	missense	c.811	p.L271I	0.025	prints_TNFR_25	pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,prints_TNFR_25,pfscan_Death_domain,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	TNFRSF25	HGNC	ENSG00000215788	tier1	-	-	56	0	0.00	43	4	8.51
TNIK	0	genome.wustl.edu	37	3	170893043	170893045	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	170893043	170893045	CTT	-	DEL	TNIK	ENST00000436636	human	ensembl	74_37	-1	known	in_frame_del	c.771_769	p.K257in_frame_del	1.000:1.000:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	TNIK	HGNC	ENSG00000154310	tier1			18	0	0.00	10	7	41.18
TNK2	0	genome.wustl.edu	37	3	195594633	195594633	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	195594633	195594633	G	-	DEL	TNK2	ENST00000381916	human	ensembl	74_37	-1	known	frame_shift_del	c.2725	p.Q909fs	1.000	pfam_Inhibitor_Mig-6	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Cdc42_binding_dom_like,pfam_Inhibitor_Mig-6,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_SAM/pointed,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SH3_domain,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	TNK2	HGNC	ENSG00000061938	tier1			53	0	0.00	22	27	55.10
TNNC2	0	genome.wustl.edu	37	20	44453471	44453471	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	44453471	44453471	C	T	SNP	TNNC2	ENST00000372555	human	ensembl	74_37	-1	known	silent	c.6	p.T2	0.941	NULL	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	TNNC2	HGNC	ENSG00000101470	tier1	rs148902583	-	41	0	0.00	19	16	45.71
TNNT2	0	genome.wustl.edu	37	1	201341267	201341267	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	201341267	201341267	G	A	SNP	TNNT2	ENST00000466570	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.049	-	-	-	no_errors	TNNT2	HGNC	ENSG00000118194	tier1	-	-	87	0	0.00	86	7	7.37
TNPO2	0	genome.wustl.edu	37	19	12825713	12825713	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	12825713	12825713	G	T	SNP	TNPO2	ENST00000425528	human	ensembl	74_37	-1	known	missense	c.812	p.A271D	1.000	superfamily_ARM-type_fold	pfam_HEAT,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	TNPO2	HGNC	ENSG00000105576	tier1	-	-	85	0	0.00	67	4	5.63
TNR	0	genome.wustl.edu	37	1	175293628	175293628	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	175293628	175293628	C	T	SNP	TNR	ENST00000263525	human	ensembl	74_37	-1	known	missense	c.3821	p.R1274H	1.000	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNR	HGNC	ENSG00000116147	tier1	-	-	88	0	0.00	70	20	22.22
TNRC6A	0	genome.wustl.edu	37	16	24834982	24834982	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	24834982	24834982	G	T	SNP	TNRC6A	ENST00000395799	human	ensembl	74_37	+1	known	missense	c.5743	p.G1915C	1.000	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6A	HGNC	ENSG00000090905	tier1	-	-	60	0	0.00	52	4	7.14
TNRC6C	0	genome.wustl.edu	37	17	76047107	76047107	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	76047107	76047107	G	-	DEL	TNRC6C	ENST00000335749	human	ensembl	74_37	+1	known	frame_shift_del	c.1964	p.E657fs	1.000	NULL	pfam_Argonaute_hook_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TNRC6C	HGNC	ENSG00000078687	tier1			27	0	0.00	22	13	37.14
TOMM6	0	genome.wustl.edu	37	6	41755470	41755470	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	41755470	41755470	G	T	SNP	TOMM6	ENST00000398881	human	ensembl	74_37	+1	novel	missense	c.35	p.G12V	0.017	NULL	NULL	-	no_errors	TOMM6	HGNC	ENSG00000214736	tier1	-	-	59	0	0.00	61	4	6.15
TOMM7	0	genome.wustl.edu	37	7	22857031	22857032	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	22857031	22857032	TT	-	DEL	TOMM7	ENST00000372879	human	ensembl	74_37	-1	putative	frame_shift_del	c.289_288	p.K96fs	0.100:0.100	NULL	pfam_Tom7	-	no_errors	TOMM7	HGNC	ENSG00000196683	tier1			29	0	0.00	16	12	42.86
TONSL	0	genome.wustl.edu	37	8	145668620	145668620	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	145668620	145668620	G	T	SNP	TONSL	ENST00000409379	human	ensembl	74_37	-1	known	missense	c.349	p.H117N	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TONSL	HGNC	ENSG00000160949	tier1	-	-	92	0	0.00	93	5	5.10
TOP3B	0	genome.wustl.edu	37	22	22319678	22319678	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	22319678	22319678	G	A	SNP	TOP3B	ENST00000357179	human	ensembl	74_37	-1	known	missense	c.922	p.R308C	0.979	pfam_Topo_IA_cen,superfamily_Topo_IA_core_domain,smart_Topo_IA_DNA-bd	pfam_Topo_IA_cen,pfam_Toprim_domain,superfamily_Topo_IA_core_domain,smart_Toprim_domain,smart_Topo_IA_2,smart_Topo_IA_DNA-bd,prints_Topo_IA	-	no_errors	TOP3B	HGNC	ENSG00000100038	tier1	-	-	71	0	0.00	55	22	28.57
TOP3B	0	genome.wustl.edu	37	22	22323023	22323023	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	22323023	22323023	T	C	SNP	TOP3B	ENST00000357179	human	ensembl	74_37	-1	known	missense	c.706	p.K236E	1.000	pfam_Topo_IA_cen,superfamily_Topo_IA_core_domain,smart_Topo_IA_2	pfam_Topo_IA_cen,pfam_Toprim_domain,superfamily_Topo_IA_core_domain,smart_Toprim_domain,smart_Topo_IA_2,smart_Topo_IA_DNA-bd,prints_Topo_IA	-	no_errors	TOP3B	HGNC	ENSG00000100038	tier1	-	-	88	0	0.00	37	21	36.21
TOPAZ1	0	genome.wustl.edu	37	3	44286737	44286737	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	44286737	44286737	A	-	DEL	TOPAZ1	ENST00000309765	human	ensembl	74_37	+1	known	frame_shift_del	c.2739	p.E916fs	0.009	NULL	NULL	-	no_errors	TOPAZ1	HGNC	ENSG00000173769	tier1			40	0	0.00	19	12	38.71
TP73	0	genome.wustl.edu	37	1	3599692	3599692	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	3599692	3599692	C	T	SNP	TP73	ENST00000378295	human	ensembl	74_37	+1	known	missense	c.134	p.T45M	0.011	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_SAM_2,superfamily_p53-like_TF_DNA-bd,superfamily_SAM/pointed,superfamily_p53_tetrameristn,smart_SAM,prints_p53_tumour_suppressor	-	no_errors	TP73	HGNC	ENSG00000078900	tier1	rs148777835	-	69	0	0.00	45	26	36.62
TPCN1	0	genome.wustl.edu	37	12	113706674	113706674	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	113706674	113706674	G	A	SNP	TPCN1	ENST00000541517	human	ensembl	74_37	+1	known	missense	c.872	p.R291Q	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom	-	no_errors	TPCN1	HGNC	ENSG00000186815	tier1	-	-	88	0	0.00	60	20	25.00
TPD52	0	genome.wustl.edu	37	8	80963777	80963777	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	80963777	80963777	T	-	DEL	TPD52	ENST00000537855	human	ensembl	74_37	-1	known	frame_shift_del	c.491	p.K164fs	1.000	pfam_TPD52	pfam_TPD52,pfam_Ribosomal_S28_mit,superfamily_NA-bd_OB-fold	-	no_errors	TPD52	HGNC	ENSG00000076554	tier1			41	0	0.00	50	10	16.67
TPK1	0	genome.wustl.edu	37	7	144364906	144364906	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	144364906	144364906	G	T	SNP	TPK1	ENST00000482940	human	ensembl	74_37	-1	known	missense	c.141	p.S47R	0.000	NULL	NULL	-	no_errors	TPK1	HGNC	ENSG00000196511	tier1	-	-	80	0	0.00	76	4	5.00
TPM4	0	genome.wustl.edu	37	19	16212344	16212344	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	16212344	16212344	T	-	DEL	TPM4	ENST00000591645	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	TPM4	HGNC	ENSG00000167460	tier1			43	0	0.00	46	10	17.86
TPMT	0	genome.wustl.edu	37	6	18139903	18139903	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	18139903	18139903	G	T	SNP	TPMT	ENST00000309983	human	ensembl	74_37	-1	known	missense	c.412	p.L138I	0.999	pfam_TPMT,pirsf_Thiopurine_S-MeTrfase	pfam_TPMT,pirsf_Thiopurine_S-MeTrfase	-	no_errors	TPMT	HGNC	ENSG00000137364				69	0	0.00	38	2	5.00
TPP1	0	genome.wustl.edu	37	11	6638871	6638871	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	6638871	6638871	G	T	SNP	TPP1	ENST00000299427	human	ensembl	74_37	-1	known	nonsense	c.366	p.C122*	0.997	pfam_Peptidase_S53_propep,superfamily_Prot_inh_propept,smart_Peptidase_S53_propep	pfam_Peptidase_S53_propep,pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom,superfamily_Prot_inh_propept,smart_Peptidase_S53_propep	-	no_errors	TPP1	HGNC	ENSG00000166340	tier1	-	-	43	0	0.00	48	4	7.69
TPRN	0	genome.wustl.edu	37	9	140087025	140087027	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	140087025	140087027	TCC	-	DEL	TPRN	ENST00000409012	human	ensembl	74_37	-1	known	in_frame_del	c.1844_1842	p.E618in_frame_del	0.745:0.829:0.911	NULL	NULL	-	no_errors	TPRN	HGNC	ENSG00000176058	tier1			46	0	0.00	27	7	20.59
TPRX2P	0	genome.wustl.edu	37	19	48364080	48364080	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	48364080	48364080	G	A	SNP	TPRX2P	ENST00000535362	human	ensembl	74_37	+1	known	missense	c.292	p.A98T	0.194	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	TPRX2P	HGNC	ENSG00000259009	tier1	-	-	63	0	0.00	25	19	43.18
TPSAB1	0	genome.wustl.edu	37	16	1291473	1291473	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	1291473	1291473	G	A	SNP	TPSAB1	ENST00000338844	human	ensembl	74_37	+1	known	missense	c.272	p.R91Q	0.005	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TPSAB1	HGNC	ENSG00000172236	tier1	-	-	48	0	0.00	27	15	35.71
TRAF2	0	genome.wustl.edu	37	9	139820270	139820270	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	139820270	139820270	G	A	SNP	TRAF2	ENST00000359662	human	ensembl	74_37	+1	known	missense	c.1579	p.V527I	0.943	pfam_MATH,superfamily_TRAF-like,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH	pfam_MATH,pfam_Znf_C3HC4_RING-type,superfamily_TRAF-like,smart_Znf_RING,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF2	HGNC	ENSG00000127191	tier1	rs148765924	-	45	0	0.00	25	11	30.56
TRAF5	0	genome.wustl.edu	37	1	211545734	211545734	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	211545734	211545734	G	-	DEL	TRAF5	ENST00000261464	human	ensembl	74_37	+1	known	frame_shift_del	c.1364	p.S457fs	1.000	pfam_MATH,superfamily_TRAF-like,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH	pfam_MATH,superfamily_TRAF-like,smart_Znf_RING,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF5	HGNC	ENSG00000082512	tier1			83	0	0.00	71	27	27.55
TRAK1	0	genome.wustl.edu	37	3	42264488	42264488	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	42264488	42264488	G	A	SNP	TRAK1	ENST00000396175	human	ensembl	74_37	+1	known	silent	c.1947	p.T649	0.046	NULL	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	-	no_errors	TRAK1	HGNC	ENSG00000182606	tier1	-	-	48	0	0.00	16	16	50.00
TRAM1L1	0	genome.wustl.edu	37	4	118005607	118005607	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	118005607	118005607	A	C	SNP	TRAM1L1	ENST00000310754	human	ensembl	74_37	-1	known	missense	c.943	p.L315V	0.297	pfam_TLC-dom,smart_TLC-dom,pirsf_Translocation_assoc_membrane,pfscan_TLC-dom	pfam_TRAM1,pfam_TLC-dom,smart_TLC-dom,pirsf_Translocation_assoc_membrane,pfscan_TLC-dom	-	no_errors	TRAM1L1	HGNC	ENSG00000174599	tier1	-	-	81	0	0.00	56	35	38.46
TRAPPC8	0	genome.wustl.edu	37	18	29453418	29453418	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	29453418	29453418	A	-	DEL	TRAPPC8	ENST00000283351	human	ensembl	74_37	-1	known	frame_shift_del	c.2037	p.F679fs	1.000	NULL	NULL	-	no_errors	TRAPPC8	HGNC	ENSG00000153339	tier1			29	0	0.00	20	15	42.86
TRAPPC9	0	genome.wustl.edu	37	8	141231604	141231604	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	141231604	141231604	A	G	SNP	TRAPPC9	ENST00000389328	human	ensembl	74_37	-1	known	missense	c.2804	p.V935A	0.000	pfam_TRAPP_II_complex_Trs120	pfam_TRAPP_II_complex_Trs120	-	no_errors	TRAPPC9	HGNC	ENSG00000167632	tier1	-	-	82	0	0.00	91	41	30.60
TRAPPC9	0	genome.wustl.edu	37	8	141468445	141468445	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	141468445	141468445	G	T	SNP	TRAPPC9	ENST00000389328	human	ensembl	74_37	-1	known	silent	c.219	p.S73	0.000	NULL	pfam_TRAPP_II_complex_Trs120	-	no_errors	TRAPPC9	HGNC	ENSG00000167632	tier1	-	-	88	0	0.00	91	26	22.22
TRDN	0	genome.wustl.edu	37	6	123703273	123703273	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	123703273	123703273	T	-	DEL	TRDN	ENST00000398178	human	ensembl	74_37	-1	known	frame_shift_del	c.1155	p.K385fs	0.199	NULL	pfam_Asp-B-hydro/Triadin_dom	-	no_errors	TRDN	HGNC	ENSG00000186439	tier1			12	0	0.00	9	6	40.00
TRDN	0	genome.wustl.edu	37	6	123786033	123786033	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	123786033	123786033	A	-	DEL	TRDN	ENST00000546248	human	ensembl	74_37	-1	known	frame_shift_del	c.889	p.S297fs	0.000	NULL	pfam_Asp-B-hydro/Triadin_dom	-	no_errors	TRDN	HGNC	ENSG00000186439	tier1			29	0	0.00	14	11	44.00
TRERF1	0	genome.wustl.edu	37	6	42237239	42237239	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	42237239	42237239	G	A	SNP	TRERF1	ENST00000541110	human	ensembl	74_37	-1	known	silent	c.90	p.S30	0.000	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_SANT/Myb,pfscan_ELM2_dom,pfscan_Znf_C2H2	-	no_errors	TRERF1	HGNC	ENSG00000124496	tier1	rs149014572	-	107	0	0.00	48	24	33.33
TRHDE-AS1	0	genome.wustl.edu	37	12	72665950	72665950	+	RNA	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	72665950	72665950	G	-	DEL	TRHDE-AS1	ENST00000435350	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	TRHDE-AS1	HGNC	ENSG00000236333	tier1			103	0	0.00	79	22	21.78
TRIM27	0	genome.wustl.edu	37	6	28889703	28889703	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	28889703	28889703	C	T	SNP	TRIM27	ENST00000377199	human	ensembl	74_37	-1	known	missense	c.482	p.R161Q	0.999	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin,prints_Znf_B-box_chordata	-	no_errors	TRIM27	HGNC	ENSG00000204713	tier1	rs149594206	-	59	0	0.00	10	37	78.72
TRIM32	0	genome.wustl.edu	37	9	119461051	119461051	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	119461051	119461051	C	T	SNP	TRIM32	ENST00000373983	human	ensembl	74_37	+1	known	missense	c.1030	p.R344W	1.000	NULL	pfam_NHL_repeat,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM32	HGNC	ENSG00000119401	tier1	-	-	12	0	0.00	10	9	47.37
TRIM41	0	genome.wustl.edu	37	5	180662356	180662356	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	180662356	180662356	C	T	SNP	TRIM41	ENST00000351937	human	ensembl	74_37	+1	known	missense	c.1534	p.R512W	0.997	pfscan_B30.2/SPRY	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,pfam_DUF3631,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM41	HGNC	ENSG00000146063	tier1	-	-	56	0	0.00	36	16	30.77
TRIM43	0	genome.wustl.edu	37	2	96262096	96262096	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	96262096	96262096	A	G	SNP	TRIM43	ENST00000272395	human	ensembl	74_37	+1	known	silent	c.654	p.K218	0.030	NULL	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM43	HGNC	ENSG00000144015	tier1	-	-	149	0	0.00	86	35	28.93
TRIM45	0	genome.wustl.edu	37	1	117661014	117661014	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	117661014	117661014	A	G	SNP	TRIM45	ENST00000256649	human	ensembl	74_37	-1	known	silent	c.864	p.I288	0.643	smart_Bbox_C	pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM45	HGNC	ENSG00000134253	tier1	-	-	56	0	0.00	18	12	40.00
TRIM46	0	genome.wustl.edu	37	1	155150676	155150676	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	155150676	155150676	C	T	SNP	TRIM46	ENST00000334634	human	ensembl	74_37	+1	known	missense	c.1108	p.L370F	0.994	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box	-	no_errors	TRIM46	HGNC	ENSG00000163462	tier1	-	-	56	0	0.00	44	20	31.25
TRIM51	0	genome.wustl.edu	37	11	55653610	55653610	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	55653610	55653610	A	-	DEL	TRIM51	ENST00000449290	human	ensembl	74_37	+1	known	frame_shift_del	c.423	p.M144fs	0.001	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM51	HGNC	ENSG00000124900	tier1			200	0	0.00	145	89	38.03
TRIM52	0	genome.wustl.edu	37	5	180687593	180687593	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	180687593	180687593	G	T	SNP	TRIM52	ENST00000327767	human	ensembl	74_37	-1	known	silent	c.222	p.A74	0.337	smart_Znf_RING	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM52	HGNC	ENSG00000183718				73	0	0.00	68	4	5.56
TRIM65	0	genome.wustl.edu	37	17	73886925	73886925	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	73886925	73886925	G	T	SNP	TRIM65	ENST00000269383	human	ensembl	74_37	-1	known	missense	c.1489	p.L497M	0.335	superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM65	HGNC	ENSG00000141569				81	0	0.00	69	4	5.48
TRIM67	0	genome.wustl.edu	37	1	231299574	231299574	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	231299574	231299574	G	A	SNP	TRIM67	ENST00000366652	human	ensembl	74_37	+1	known	missense	c.859	p.A287T	0.001	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box	-	no_errors	TRIM67	HGNC	ENSG00000119283	tier1	-	-	10	0	0.00	4	4	50.00
TRIM8	0	genome.wustl.edu	37	10	104414960	104414960	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	104414960	104414960	G	A	SNP	TRIM8	ENST00000302424	human	ensembl	74_37	+1	known	missense	c.790	p.E264K	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	TRIM8	HGNC	ENSG00000171206	tier1	-	-	67	0	0.00	29	12	29.27
TRIO	0	genome.wustl.edu	37	5	14419946	14419946	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	14419946	14419946	C	T	SNP	TRIO	ENST00000344204	human	ensembl	74_37	+1	known	silent	c.5019	p.N1673	0.041	pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	TRIO	HGNC	ENSG00000038382	tier1	-	-	38	0	0.00	24	40	62.50
TRIOBP	0	genome.wustl.edu	37	22	38130773	38130773	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	38130773	38130773	G	-	DEL	TRIOBP	ENST00000406386	human	ensembl	74_37	+1	known	frame_shift_del	c.4430	p.G1479fs	0.003	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	TRIOBP	HGNC	ENSG00000100106	tier1			48	0	0.00	21	16	43.24
TRIP10	0	genome.wustl.edu	37	19	6743770	6743770	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	6743770	6743770	G	A	SNP	TRIP10	ENST00000313244	human	ensembl	74_37	+1	known	missense	c.565	p.E189K	1.000	NULL	pfam_FCH_dom,pfam_SH3_domain,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain	-	no_errors	TRIP10	HGNC	ENSG00000125733	tier1	-	-	35	0	0.00	15	11	42.31
TRIP10	0	genome.wustl.edu	37	19	6750380	6750380	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	6750380	6750380	C	-	DEL	TRIP10	ENST00000313244	human	ensembl	74_37	+1	known	frame_shift_del	c.1473	p.A494fs	0.994	NULL	pfam_FCH_dom,pfam_SH3_domain,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain	-	no_errors	TRIP10	HGNC	ENSG00000125733	tier1			69	0	0.00	38	17	30.91
TRIP12	0	genome.wustl.edu	37	2	230668381	230668381	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	230668381	230668381	G	A	SNP	TRIP12	ENST00000283943	human	ensembl	74_37	-1	known	silent	c.2679	p.S893	1.000	superfamily_ARM-type_fold	pfam_HECT,superfamily_HECT,superfamily_ARM-type_fold,smart_HECT,pfscan_HECT,pfscan_WWE-dom	-	no_errors	TRIP12	HGNC	ENSG00000153827	tier1	-	-	50	0	0.00	61	4	6.15
TRIP12	0	genome.wustl.edu	37	2	230672543	230672544	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	230672543	230672544	-	A	INS	TRIP12	ENST00000283943	human	ensembl	74_37	-1	known	frame_shift_ins	c.2233_2232	p.A744fs	1.000:1.000	superfamily_ARM-type_fold	pfam_HECT,superfamily_HECT,superfamily_ARM-type_fold,smart_HECT,pfscan_HECT,pfscan_WWE-dom	-	no_errors	TRIP12	HGNC	ENSG00000153827	tier1			65	0	0.00	39	22	36.07
TRIP12	0	genome.wustl.edu	37	2	230636243	230636243	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	230636243	230636243	G	T	SNP	TRIP12	ENST00000283943	human	ensembl	74_37	-1	known	missense	c.5575	p.P1859T	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,superfamily_HECT,superfamily_ARM-type_fold,smart_HECT,pfscan_HECT,pfscan_WWE-dom	-	no_errors	TRIP12	HGNC	ENSG00000153827				26	0	0.00	49	4	7.55
TRMT61B	0	genome.wustl.edu	37	2	29087951	29087951	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	29087951	29087951	T	C	SNP	TRMT61B	ENST00000306108	human	ensembl	74_37	-1	known	missense	c.734	p.N245S	0.305	pfam_tRNA_MeTrfase_GCD14,pfam_PCMT	pfam_tRNA_MeTrfase_GCD14,pfam_PCMT	-	no_errors	TRMT61B	HGNC	ENSG00000171103	tier1	-	-	36	0	0.00	29	22	43.14
TROVE2	0	genome.wustl.edu	37	1	193053997	193053998	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	193053997	193053998	AA	-	DEL	TROVE2	ENST00000460715	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.002	-	-	-	no_errors	TROVE2	HGNC	ENSG00000116747	tier1			28	0	0.00	32	12	27.27
TRPA1	0	genome.wustl.edu	37	8	72966004	72966004	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	72966004	72966004	C	T	SNP	TRPA1	ENST00000262209	human	ensembl	74_37	-1	known	missense	c.1628	p.R543H	0.072	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	TRPA1	HGNC	ENSG00000104321	tier1	-	-	88	0	0.00	77	49	38.89
TRPC3	0	genome.wustl.edu	37	4	122854106	122854106	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	122854106	122854106	T	C	SNP	TRPC3	ENST00000379645	human	ensembl	74_37	-1	known	missense	c.307	p.N103D	1.000	tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPC3_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC3	HGNC	ENSG00000138741	tier1	-	-	40	0	0.00	21	11	34.38
TRPM6	0	genome.wustl.edu	37	9	77353400	77353400	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	77353400	77353400	A	G	SNP	TRPM6	ENST00000451710	human	ensembl	74_37	-1	known	missense	c.5711	p.L1904P	1.000	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM6	HGNC	ENSG00000119121	tier1	-	-	72	0	0.00	49	32	39.51
TRPS1	0	genome.wustl.edu	37	8	116599766	116599766	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	116599766	116599766	A	G	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	missense	c.2162	p.L721P	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447	tier1	-	-	41	0	0.00	54	21	28.00
TSC1	0	genome.wustl.edu	37	9	135779102	135779102	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	135779102	135779102	C	T	SNP	TSC1	ENST00000298552	human	ensembl	74_37	-1	known	missense	c.2144	p.R715Q	1.000	pfam_Hamartin	pfam_Hamartin,superfamily_ARM-type_fold	-	no_errors	TSC1	HGNC	ENSG00000165699	tier1	-	-	47	0	0.00	23	12	34.29
TSC2	0	genome.wustl.edu	37	16	2126499	2126499	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	2126499	2126499	G	A	SNP	TSC2	ENST00000219476	human	ensembl	74_37	+1	known	missense	c.2750	p.R917Q	1.000	NULL	pfam_Tuberin-type_domain,pfam_Tuberin_N,pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom,prints_Tuberin	-	no_errors	TSC2	HGNC	ENSG00000103197	tier1	-	-	40	0	0.00	9	19	67.86
TSEN54	0	genome.wustl.edu	37	17	73518162	73518162	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	73518162	73518162	G	A	SNP	TSEN54	ENST00000333213	human	ensembl	74_37	+1	known	missense	c.1000	p.A334T	0.049	NULL	NULL	-	no_errors	TSEN54	HGNC	ENSG00000182173	tier1	-	-	22	0	0.00	19	14	42.42
TSHZ3	0	genome.wustl.edu	37	19	31769235	31769235	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	31769235	31769235	T	-	DEL	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	frame_shift_del	c.1464	p.D489fs	0.971	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297	tier1			66	0	0.00	33	8	19.51
TSPAN10	0	genome.wustl.edu	37	17	79612316	79612317	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	79612316	79612317	-	G	INS	TSPAN10	ENST00000328585	human	ensembl	74_37	+1	known	frame_shift_ins	c.335_336	p.P115fs	0.000:0.002	pfam_Tetraspanin/Peripherin	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN10	HGNC	ENSG00000182612	tier1			81	0	0.00	34	22	39.29
TSPAN10	0	genome.wustl.edu	37	17	79612420	79612420	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	79612420	79612420	A	G	SNP	TSPAN10	ENST00000328585	human	ensembl	74_37	+1	known	missense	c.439	p.T147A	0.001	pfam_Tetraspanin/Peripherin,prints_Tetraspanin	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN10	HGNC	ENSG00000182612	tier1	-	-	173	0	0.00	59	63	51.64
TSPAN14	0	genome.wustl.edu	37	10	82279271	82279271	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	82279271	82279271	T	-	DEL	TSPAN14	ENST00000265450	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TSPAN14	HGNC	ENSG00000108219	tier1			101	0	0.00	91	31	25.41
TSPEAR	0	genome.wustl.edu	37	21	46131375	46131375	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	46131375	46131375	C	T	SNP	TSPEAR	ENST00000323084	human	ensembl	74_37	-1	known	missense	c.55	p.G19S	0.000	NULL	pfam_EPTP,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_EAR	-	no_errors	TSPEAR	HGNC	ENSG00000175894	tier1	-	-	66	0	0.00	33	18	35.29
TSPYL1	0	genome.wustl.edu	37	6	116600626	116600626	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	116600626	116600626	T	C	SNP	TSPYL1	ENST00000368608	human	ensembl	74_37	-1	known	missense	c.368	p.K123R	0.000	NULL	pfam_NAP_family	-	no_errors	TSPYL1	HGNC	ENSG00000189241	tier1	-	-	87	0	0.00	43	40	48.19
TSPYL5	0	genome.wustl.edu	37	8	98289596	98289596	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	98289596	98289596	C	-	DEL	TSPYL5	ENST00000322128	human	ensembl	74_37	-1	known	frame_shift_del	c.477	p.P160fs	0.000	NULL	pfam_NAP_family	-	no_errors	TSPYL5	HGNC	ENSG00000180543	tier1			42	0	0.00	36	15	29.41
TSPYL6	0	genome.wustl.edu	37	2	54482768	54482768	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	54482768	54482768	G	A	SNP	TSPYL6	ENST00000317802	human	ensembl	74_37	-1	known	missense	c.521	p.A174V	0.000	NULL	pfam_NAP_family	-	no_errors	TSPYL6	HGNC	ENSG00000178021				13	0	0.00	8	3	27.27
TSSK2	0	genome.wustl.edu	37	22	19119732	19119732	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	19119732	19119732	C	-	DEL	TSSK2	ENST00000399635	human	ensembl	74_37	+1	known	frame_shift_del	c.820	p.K276fs	0.998	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TSSK2	HGNC	ENSG00000206203	tier1			45	0	0.00	15	6	28.57
TTBK1	0	genome.wustl.edu	37	6	43227441	43227441	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	43227441	43227441	G	T	SNP	TTBK1	ENST00000259750	human	ensembl	74_37	+1	known	missense	c.1421	p.R474M	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTBK1	HGNC	ENSG00000146216	tier1	-	-	81	0	0.00	61	4	6.15
TTC22	0	genome.wustl.edu	37	1	55252654	55252654	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	55252654	55252654	G	A	SNP	TTC22	ENST00000371276	human	ensembl	74_37	-1	known	silent	c.834	p.T278	0.079	NULL	smart_TPR_repeat	-	no_errors	TTC22	HGNC	ENSG00000006555	tier1	-	-	65	0	0.00	31	34	52.31
TTC24	0	genome.wustl.edu	37	1	156552852	156552852	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	156552852	156552852	G	A	SNP	TTC24	ENST00000368236	human	ensembl	74_37	+1	known	nonsense	c.929	p.W310*	0.988	pfscan_TPR-contain_dom	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC24	HGNC	ENSG00000187862	tier1	-	-	73	0	0.00	49	28	36.36
TTC3	0	genome.wustl.edu	37	21	38512963	38512963	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	38512963	38512963	A	-	DEL	TTC3	ENST00000354749	human	ensembl	74_37	+1	known	frame_shift_del	c.1762	p.N590fs	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_Znf_C3HC4_RING-type,superfamily_DEATH-like_dom,smart_TPR_repeat,smart_Znf_RING,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	TTC3	HGNC	ENSG00000182670	tier1			49	0	0.00	54	24	30.77
TTC39A	0	genome.wustl.edu	37	1	51761818	51761818	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	51761818	51761818	C	T	SNP	TTC39A	ENST00000447632	human	ensembl	74_37	-1	known	missense	c.1186	p.A396T	0.986	pfam_OMP_IML2_mit/TPR_39	pfam_OMP_IML2_mit/TPR_39,smart_TPR_repeat	-	no_errors	TTC39A	HGNC	ENSG00000085831	tier1	-	-	113	0	0.00	64	42	39.62
TTC40	0	genome.wustl.edu	37	10	134628225	134628225	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	134628225	134628225	G	-	DEL	TTC40	ENST00000263170	human	ensembl	74_37	-1	known	frame_shift_del	c.1697	p.P566fs	0.001	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811	tier1			75	0	0.00	34	20	37.04
TTC40	0	genome.wustl.edu	37	10	134648892	134648892	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	134648892	134648892	G	T	SNP	TTC40	ENST00000263170	human	ensembl	74_37	-1	known	silent	c.1143	p.S381	0.000	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811	tier1	-	-	33	0	0.00	22	4	15.38
TTC40	0	genome.wustl.edu	37	10	134664663	134664663	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	134664663	134664663	C	T	SNP	TTC40	ENST00000263170	human	ensembl	74_37	-1	known	silent	c.204	p.A68	0.000	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811	tier1	rs140935676	-	50	0	0.00	20	18	47.37
TTC7B	0	genome.wustl.edu	37	14	91007520	91007520	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	91007520	91007520	A	-	DEL	TTC7B	ENST00000554654	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TTC7B	HGNC	ENSG00000165914	tier1			29	0	0.00	11	4	26.67
TTI1	0	genome.wustl.edu	37	20	36627649	36627649	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	36627649	36627649	G	C	SNP	TTI1	ENST00000373447	human	ensembl	74_37	-1	known	missense	c.2734	p.P912A	1.000	superfamily_ARM-type_fold,pirsf_UCP005250	superfamily_ARM-type_fold,pirsf_UCP005250	-	no_errors	TTI1	HGNC	ENSG00000101407	tier1	-	-	49	0	0.00	18	14	43.75
TTK	0	genome.wustl.edu	37	6	80721484	80721484	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	80721484	80721484	G	A	SNP	TTK	ENST00000369798	human	ensembl	74_37	+1	known	missense	c.767	p.R256Q	0.116	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTK	HGNC	ENSG00000112742	tier1	-	-	47	0	0.00	34	17	32.08
TTK	0	genome.wustl.edu	37	6	80751897	80751897	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	80751897	80751897	A	-	DEL	TTK	ENST00000369798	human	ensembl	74_37	+1	known	frame_shift_del	c.2552	p.R854fs	0.102	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTK	HGNC	ENSG00000112742	tier1			47	0	0.00	40	21	34.43
TTK	0	genome.wustl.edu	37	6	80751905	80751905	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	80751905	80751905	A	G	SNP	TTK	ENST00000369798	human	ensembl	74_37	+1	known	missense	c.2560	p.R854G	0.014	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTK	HGNC	ENSG00000112742				46	0	0.00	56	3	5.08
TTLL13	0	genome.wustl.edu	37	15	90802159	90802159	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	90802159	90802159	G	T	SNP	TTLL13	ENST00000438251	human	ensembl	74_37	+1	known	missense	c.1352	p.R451M	1.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL13	HGNC	ENSG00000213471	tier1	-	-	94	0	0.00	30	29	49.15
TTN	0	genome.wustl.edu	37	2	179395339	179395339	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	179395339	179395339	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.98299	p.H32767N	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	42	0	0.00	54	5	8.47
TTN	0	genome.wustl.edu	37	2	179498701	179498701	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	179498701	179498701	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.34821	p.F11607L	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	44	0	0.00	52	5	8.77
TTN	0	genome.wustl.edu	37	2	179584325	179584325	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	179584325	179584325	T	-	DEL	TTN	ENST00000342992	human	ensembl	74_37	-1	known	frame_shift_del	c.20162	p.N6721fs	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1			35	0	0.00	20	10	33.33
TTN	0	genome.wustl.edu	37	2	179631242	179631242	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	179631242	179631242	A	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.9569	p.V3190D	0.990	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	88	0	0.00	33	19	36.54
TTN	0	genome.wustl.edu	37	2	179643760	179643760	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	179643760	179643760	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.4049	p.R1350H	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	23	0	0.00	12	6	33.33
TTN	0	genome.wustl.edu	37	2	179643779	179643779	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	179643779	179643779	C	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.4030	p.D1344Y	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	19	0	0.00	12	7	36.84
TTN	0	genome.wustl.edu	37	2	179613430	179613430	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	179613430	179613430	G	T	SNP	TTN	ENST00000360870	human	ensembl	74_37	-1	known	missense	c.13697	p.A4566D	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Titin_Z,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				33	0	0.00	34	2	5.56
TUBA4B	0	genome.wustl.edu	37	2	220118077	220118078	+	RNA	DEL	GG	GG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	GG	GG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	220118077	220118078	GG	-	DEL	TUBA4B	ENST00000473885	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	TUBA4B	HGNC	ENSG00000243910	tier1			8	0	0.00	4	4	50.00
TUBG2	0	genome.wustl.edu	37	17	40818799	40818799	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	40818799	40818799	G	T	SNP	TUBG2	ENST00000251412	human	ensembl	74_37	+1	known	missense	c.1337	p.W446L	1.000	NULL	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Gamma_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBG2	HGNC	ENSG00000037042	tier1	-	-	70	0	0.00	45	4	8.16
TUBGCP2	0	genome.wustl.edu	37	10	135107236	135107236	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	135107236	135107236	C	A	SNP	TUBGCP2	ENST00000543663	human	ensembl	74_37	-1	known	silent	c.738	p.V246	1.000	pfam_TUBGCP	pfam_TUBGCP,superfamily_Ocr	-	no_errors	TUBGCP2	HGNC	ENSG00000130640	tier1	-	-	108	0	0.00	38	25	39.68
TUBGCP2	0	genome.wustl.edu	37	10	135116332	135116332	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	135116332	135116332	C	T	SNP	TUBGCP2	ENST00000543663	human	ensembl	74_37	-1	known	silent	c.114	p.P38	0.723	NULL	pfam_TUBGCP,superfamily_Ocr	-	no_errors	TUBGCP2	HGNC	ENSG00000130640	tier1	-	-	25	0	0.00	23	6	20.69
TVP23B	0	genome.wustl.edu	37	17	18707518	18707518	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	18707518	18707518	G	A	SNP	TVP23B	ENST00000307767	human	ensembl	74_37	+1	known	missense	c.530	p.R177H	1.000	NULL	pfam_DUF846_euk	-	no_errors	TVP23B	HGNC	ENSG00000171928	tier1	-	-	101	0	0.00	43	45	51.14
TVP23C	0	genome.wustl.edu	37	17	15441469	15441469	+	Splice_Site	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	15441469	15441469	C	T	SNP	TVP23C	ENST00000523573	human	ensembl	74_37	-1	known	splice_site	c.162-2	e5-2	0.998	-	-	-	no_errors	TVP23C	HGNC	ENSG00000175106	tier1	-	-	77	0	0.00	84	32	27.35
TWISTNB	0	genome.wustl.edu	37	7	19739713	19739713	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	19739713	19739713	C	-	DEL	TWISTNB	ENST00000222567	human	ensembl	74_37	-1	known	frame_shift_del	c.587	p.G196fs	1.000	NULL	pfam_RNA_pol_Rpb7_N	-	no_errors	TWISTNB	HGNC	ENSG00000105849	tier1			46	0	0.00	42	24	36.36
TXK	0	genome.wustl.edu	37	4	48088568	48088568	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	48088568	48088568	G	T	SNP	TXK	ENST00000264316	human	ensembl	74_37	-1	known	silent	c.871	p.R291	0.997	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	TXK	HGNC	ENSG00000074966	tier1	-	-	78	0	0.00	63	6	8.70
TXNL1	0	genome.wustl.edu	37	18	54278226	54278226	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	54278226	54278226	G	A	SNP	TXNL1	ENST00000217515	human	ensembl	74_37	-1	known	nonsense	c.838	p.R280*	1.000	NULL	pfam_PITH_dom,pfam_Thioredoxin_domain,superfamily_Galactose-bd-like,superfamily_Thioredoxin-like_fold	-	no_errors	TXNL1	HGNC	ENSG00000091164	tier1	-	-	32	0	0.00	20	13	39.39
TXNRD2	0	genome.wustl.edu	37	22	19882493	19882496	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	19882493	19882496	AAAA	-	DEL	TXNRD2	ENST00000491939	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.027:0.029:0.029:0.026	-	-	-	no_errors	TXNRD2	HGNC	ENSG00000184470	tier1			19	0	0.00	13	5	27.78
TYK2	0	genome.wustl.edu	37	19	10468442	10468442	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	10468442	10468442	C	T	SNP	TYK2	ENST00000264818	human	ensembl	74_37	-1	known	missense	c.2464	p.E822K	0.998	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,pfscan_Prot_kinase_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_Tyr_kinase_non-rcpt_TYK2_N	-	no_errors	TYK2	HGNC	ENSG00000105397	tier1	-	-	66	0	0.00	34	25	42.37
TYRO3	0	genome.wustl.edu	37	15	41859622	41859622	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	41859622	41859622	G	T	SNP	TYRO3	ENST00000263798	human	ensembl	74_37	+1	known	missense	c.848	p.C283F	0.990	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TYRO3	HGNC	ENSG00000092445	tier1	-	-	68	0	0.00	68	4	5.56
U2AF1	0	genome.wustl.edu	37	21	44515596	44515596	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	44515596	44515596	G	A	SNP	U2AF1	ENST00000291552	human	ensembl	74_37	-1	known	silent	c.300	p.N100	0.993	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	pfam_Znf_CCCH,pfam_RRM_dom,smart_Znf_CCCH,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,prints_U2_small	-	no_errors	U2AF1	HGNC	ENSG00000160201	tier1	-	-	53	0	0.00	27	20	42.55
UACA	0	genome.wustl.edu	37	15	70991908	70991908	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	70991908	70991908	T	-	DEL	UACA	ENST00000322954	human	ensembl	74_37	-1	known	frame_shift_del	c.170	p.K57fs	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Prefoldin,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_T_SNARE_dom,prints_Ankyrin_rpt	-	no_errors	UACA	HGNC	ENSG00000137831	tier1			105	0	0.00	62	29	31.87
UACA	0	genome.wustl.edu	37	15	70991908	70991908	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	70991908	70991908	T	C	SNP	UACA	ENST00000322954	human	ensembl	74_37	-1	known	missense	c.170	p.K57R	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Prefoldin,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_T_SNARE_dom,prints_Ankyrin_rpt	-	no_errors	UACA	HGNC	ENSG00000137831				105	0	0.00	56	6	6.59
UBA6	0	genome.wustl.edu	37	4	68566794	68566794	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	68566794	68566794	G	A	SNP	UBA6	ENST00000322244	human	ensembl	74_37	-1	known	missense	c.44	p.A15V	0.864	NULL	pfam_ThiF_NAD_FAD-bd,pfam_Ub-activating_enz_e1_C,pfam_UBact_repeat,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	-	no_errors	UBA6	HGNC	ENSG00000033178	tier1	-	-	73	0	0.00	35	23	39.66
UBAP2L	0	genome.wustl.edu	37	1	154227293	154227294	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	154227293	154227294	TT	-	DEL	UBAP2L	ENST00000495676	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.026:0.101	-	-	-	no_errors	UBAP2L	HGNC	ENSG00000143569	tier1			96	0	0.00	68	21	23.60
UBAP2L	0	genome.wustl.edu	37	1	154233427	154233427	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	154233427	154233427	G	T	SNP	UBAP2L	ENST00000361546	human	ensembl	74_37	+1	known	missense	c.2638	p.A880S	1.000	NULL	pfam_DUF3697_Uba2,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAP2L	HGNC	ENSG00000143569				43	0	0.00	52	3	5.45
UBASH3B	0	genome.wustl.edu	37	11	122678802	122678802	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	122678802	122678802	C	T	SNP	UBASH3B	ENST00000284273	human	ensembl	74_37	+1	known	missense	c.1730	p.A577V	1.000	pfam_His_Pase_superF_clade-1	pfam_His_Pase_superF_clade-1,pfam_SH3_domain,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_SH3_domain,superfamily_RNA_ligase/cNuc_Pdiesterase,smart_UBA/transl_elong_EF1B_N_euk,smart_SH3_domain,pfscan_SH3_domain,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBASH3B	HGNC	ENSG00000154127	tier1	-	-	65	0	0.00	31	27	46.55
UBE2C	0	genome.wustl.edu	37	20	44443031	44443031	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	44443031	44443031	C	T	SNP	UBE2C	ENST00000356455	human	ensembl	74_37	+1	known	silent	c.138	p.G46	0.977	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2C	HGNC	ENSG00000175063	tier1	-	-	74	0	0.00	26	25	49.02
UBE2E1	0	genome.wustl.edu	37	3	23932118	23932118	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	23932118	23932118	A	G	SNP	UBE2E1	ENST00000475680	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.083	-	-	-	no_errors	UBE2E1	HGNC	ENSG00000170142	tier1	-	-	64	0	0.00	38	28	42.42
UBE2M	0	genome.wustl.edu	37	19	59067561	59067561	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	59067561	59067561	G	A	SNP	UBE2M	ENST00000253023	human	ensembl	74_37	-1	known	silent	c.447	p.A149	0.819	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2M	HGNC	ENSG00000130725	tier1	-	-	89	0	0.00	42	26	38.24
UBE2QL1	0	genome.wustl.edu	37	5	6449100	6449100	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	6449100	6449100	C	T	SNP	UBE2QL1	ENST00000399816	human	ensembl	74_37	+1	known	missense	c.94	p.H32Y	1.000	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2QL1	HGNC	ENSG00000215218	tier1	-	-	32	0	0.00	41	9	18.00
UBE2V1	0	genome.wustl.edu	37	20	48697884	48697885	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	48697884	48697885	AA	-	DEL	UBE2V1	ENST00000396059	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.185:0.007	-	-	-	no_errors	UBE2V1	HGNC	ENSG00000244687	tier1			50	0	0.00	24	14	36.84
UBR5	0	genome.wustl.edu	37	8	103277382	103277382	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	103277382	103277382	G	T	SNP	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	missense	c.7547	p.P2516Q	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517	tier1	-	-	38	0	0.00	61	4	6.06
UBR5	0	genome.wustl.edu	37	8	103289349	103289349	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	103289349	103289349	T	-	DEL	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	frame_shift_del	c.6360	p.E2121fs	0.987	NULL	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517	tier1			141	0	0.00	186	43	18.78
UBR5	0	genome.wustl.edu	37	8	103297931	103297931	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	103297931	103297931	G	A	SNP	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	missense	c.5294	p.A1765V	1.000	NULL	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517				19	0	0.00	28	2	6.67
UBXN4	0	genome.wustl.edu	37	2	136528170	136528170	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	136528170	136528170	A	-	DEL	UBXN4	ENST00000272638	human	ensembl	74_37	+1	known	frame_shift_del	c.687	p.T231fs	0.997	NULL	pfam_UBX,superfamily_Thioredoxin-like_fold,smart_UBX,pfscan_UBX	-	no_errors	UBXN4	HGNC	ENSG00000144224	tier1			26	0	0.00	24	13	35.14
UBXN6	0	genome.wustl.edu	37	19	4446060	4446060	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	4446060	4446060	T	C	SNP	UBXN6	ENST00000301281	human	ensembl	74_37	-1	known	missense	c.1186	p.N396D	0.978	pfam_UBX,smart_UBX,pfscan_UBX	pfam_PUB_domain,pfam_UBX,smart_PUG-dom,smart_UBX,pfscan_UBX	-	no_errors	UBXN6	HGNC	ENSG00000167671				18	0	0.00	18	3	14.29
UBXN7	0	genome.wustl.edu	37	3	196089199	196089199	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	196089199	196089199	T	-	DEL	UBXN7	ENST00000296328	human	ensembl	74_37	-1	known	frame_shift_del	c.1194	p.A399fs	0.815	pirsf_UCP037991_UAS/UBX	pfam_UBX,superfamily_UBA-like,smart_UAS,smart_UBX,pirsf_UCP037991_UAS/UBX,pfscan_UBX	-	no_errors	UBXN7	HGNC	ENSG00000163960	tier1			77	0	0.00	37	22	37.29
UCK2	0	genome.wustl.edu	37	1	165877195	165877195	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	165877195	165877195	T	-	DEL	UCK2	ENST00000462329	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.021	-	-	-	no_errors	UCK2	HGNC	ENSG00000143179	tier1			31	0	0.00	40	13	24.53
UCP3	0	genome.wustl.edu	37	11	73712474	73712474	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	73712474	73712474	G	A	SNP	UCP3	ENST00000314032	human	ensembl	74_37	-1	known	missense	c.922	p.R308W	0.245	prints_Mit_uncoupling	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_uncoupling,prints_Mit_carrier	-	no_errors	UCP3	HGNC	ENSG00000175564	tier1	-	-	112	0	0.00	61	39	39.00
UEVLD	0	genome.wustl.edu	37	11	18566189	18566189	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	18566189	18566189	G	A	SNP	UEVLD	ENST00000396197	human	ensembl	74_37	-1	known	silent	c.1041	p.G347	0.964	pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C,prints_L-lactate/malate_DH	pfam_UEV_N,pfam_Lactate/malate_DH_N,pfam_Lactate/malate_DH_C,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Lactate_DH/Glyco_Ohase_4_C,prints_L-lactate/malate_DH	-	no_errors	UEVLD	HGNC	ENSG00000151116	tier1	-	-	30	0	0.00	17	14	45.16
UHRF1	0	genome.wustl.edu	37	19	4910891	4910891	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	4910891	4910891	C	T	SNP	UHRF1	ENST00000262952	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.969	-	-	-	no_errors	UHRF1	HGNC	ENSG00000034063	tier1	-	-	39	0	0.00	24	17	41.46
UHRF1	0	genome.wustl.edu	37	19	4944160	4944160	+	RNA	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	4944160	4944160	C	A	SNP	UHRF1	ENST00000262952	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	UHRF1	HGNC	ENSG00000034063	tier1	-	-	98	0	0.00	51	23	31.08
ULK1	0	genome.wustl.edu	37	12	132400471	132400471	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	132400471	132400471	G	T	SNP	ULK1	ENST00000321867	human	ensembl	74_37	+1	known	missense	c.1645	p.G549W	0.993	pirsf_Ser/Thr_kin_STPK_Ulk-1/2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ser/Thr_kinase_C,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ULK1	HGNC	ENSG00000177169				50	0	0.00	39	3	7.14
UMOD	0	genome.wustl.edu	37	16	20360037	20360037	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	20360037	20360037	C	T	SNP	UMOD	ENST00000424589	human	ensembl	74_37	-1	known	missense	c.685	p.D229N	0.998	NULL	pfam_ZP_dom,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_ZP_dom,pfscan_EG-like_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	UMOD	HGNC	ENSG00000169344	tier1	-	-	12	0	0.00	6	5	45.45
UMODL1	0	genome.wustl.edu	37	21	43547905	43547905	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	43547905	43547905	C	T	SNP	UMODL1	ENST00000408989	human	ensembl	74_37	+1	known	silent	c.4038	p.R1346	0.000	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	pfam_ZP_dom,pfam_SEA_dom,pfam_EGF-like_Ca-bd_dom,pfam_EMI_domain,pfam_WAP-type_4-diS_core,superfamily_Fibronectin_type3,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_EGF-like_Ca-bd_dom,smart_Fibronectin_type3,smart_ZP_dom,pfscan_EG-like_dom,pfscan_EMI_domain,pfscan_Fibronectin_type3,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	UMODL1	HGNC	ENSG00000177398	tier1	-	-	107	0	0.00	54	32	37.21
UNC13B	0	genome.wustl.edu	37	9	35396556	35396556	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	35396556	35396556	C	T	SNP	UNC13B	ENST00000378496	human	ensembl	74_37	+1	known	missense	c.3145	p.R1049W	0.483	NULL	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13B	HGNC	ENSG00000198722	tier1	rs151027172	-	42	0	0.00	23	17	42.50
UNC13C	0	genome.wustl.edu	37	15	54685306	54685306	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	54685306	54685306	T	G	SNP	UNC13C	ENST00000260323	human	ensembl	74_37	+1	known	missense	c.4774	p.W1592G	1.000	pfam_Ca-dep_secretion_activator	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13C	HGNC	ENSG00000137766	tier1	-	-	80	0	0.00	51	30	37.04
UNC45A	0	genome.wustl.edu	37	15	91485759	91485759	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	91485759	91485759	G	A	SNP	UNC45A	ENST00000418476	human	ensembl	74_37	+1	known	silent	c.780	p.L260	1.000	superfamily_ARM-type_fold	pfam_UNC-45/Ring3,superfamily_ARM-type_fold,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	UNC45A	HGNC	ENSG00000140553	tier1	-	-	63	0	0.00	36	16	30.77
UNC5C	0	genome.wustl.edu	37	4	96140293	96140294	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	96140293	96140294	-	G	INS	UNC5C	ENST00000453304	human	ensembl	74_37	-1	known	frame_shift_ins	c.1472_1471	p.Q491fs	0.999:0.999	NULL	pfam_ZU5,pfam_Death_domain,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5C	HGNC	ENSG00000182168	tier1			50	0	0.00	20	14	41.18
UNC79	0	genome.wustl.edu	37	14	94088050	94088050	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	94088050	94088050	A	-	DEL	UNC79	ENST00000553484	human	ensembl	74_37	+1	known	frame_shift_del	c.4537	p.K1515fs	1.000	superfamily_ARM-type_fold	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	-	no_errors	UNC79	HGNC	ENSG00000133958	tier1			49	0	0.00	24	10	29.41
UPF3A	0	genome.wustl.edu	37	13	115057211	115057211	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	115057211	115057211	A	-	DEL	UPF3A	ENST00000375299	human	ensembl	74_37	+1	known	frame_shift_del	c.790	p.E267fs	0.943	NULL	pfam_Nonsense_mediated_decay_UPF3	-	no_errors	UPF3A	HGNC	ENSG00000169062	tier1			51	0	0.00	48	29	37.66
UQCC2	0	genome.wustl.edu	37	6	33668253	33668253	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	33668253	33668253	G	A	SNP	UQCC2	ENST00000607484	human	ensembl	74_37	-1	known	missense	c.251	p.S84L	0.990	NULL	NULL	-	no_errors	UQCC2	HGNC	ENSG00000137288	tier1	-	-	90	0	0.00	59	38	38.78
UQCRC1	0	genome.wustl.edu	37	3	48637505	48637505	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	48637505	48637505	G	A	SNP	UQCRC1	ENST00000203407	human	ensembl	74_37	-1	known	silent	c.1293	p.S431	1.000	superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	UQCRC1	HGNC	ENSG00000010256	tier1	-	-	24	0	0.00	16	10	38.46
UQCRC2	0	genome.wustl.edu	37	16	21980007	21980007	+	Splice_Site	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	21980007	21980007	G	T	SNP	UQCRC2	ENST00000268379	human	ensembl	74_37	+1	known	splice_site	c.670+1	e8+1	1.000	-	-	-	no_errors	UQCRC2	HGNC	ENSG00000140740	tier1	-	-	87	0	0.00	105	6	5.41
URAHP	0	genome.wustl.edu	37	16	90110921	90110921	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	90110921	90110921	G	T	SNP	URAHP	ENST00000409768	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	URAHP	HGNC	ENSG00000222019	tier1	-	-	41	0	0.00	27	4	12.90
URI1	0	genome.wustl.edu	37	19	30503199	30503199	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	30503199	30503199	G	A	SNP	URI1	ENST00000542441	human	ensembl	74_37	+1	known	missense	c.1186	p.V396I	1.000	NULL	pfam_Prefoldin_subunit_alpha,superfamily_Prefoldin	-	no_errors	URI1	HGNC	ENSG00000105176	tier1	-	-	46	0	0.00	28	21	42.00
UROD	0	genome.wustl.edu	37	1	45480557	45480557	+	RNA	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	45480557	45480557	T	C	SNP	UROD	ENST00000466193	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	UROD	HGNC	ENSG00000126088	tier1	-	-	58	0	0.00	33	22	38.60
USF2	0	genome.wustl.edu	37	19	35770659	35770660	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	35770659	35770660	AA	-	DEL	USF2	ENST00000600341	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.089:0.925	-	-	-	no_errors	USF2	HGNC	ENSG00000105698	tier1			38	0	0.00	34	13	27.66
USHBP1	0	genome.wustl.edu	37	19	17374897	17374898	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	17374897	17374898	-	T	INS	USHBP1	ENST00000252597	human	ensembl	74_37	-1	known	frame_shift_ins	c.117_116	p.P40fs	0.000:0.000	NULL	pfam_USH1C-bd_PDZ_domain	-	no_errors	USHBP1	HGNC	ENSG00000130307	tier1			73	0	0.00	46	17	26.98
USP10	0	genome.wustl.edu	37	16	84797822	84797822	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	84797822	84797822	G	A	SNP	USP10	ENST00000570191	human	ensembl	74_37	+1	known	silent	c.1797	p.A599	0.008	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Ataxin-2_C,pfscan_Peptidase_C19/C67	-	no_errors	USP10	HGNC	ENSG00000103194	tier1	-	-	35	0	0.00	17	8	32.00
USP21	0	genome.wustl.edu	37	1	161135370	161135370	+	RNA	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	161135370	161135370	T	-	DEL	USP21	ENST00000493054	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	USP21	HGNC	ENSG00000143258	tier1			49	0	0.00	51	25	32.89
USP27X-AS1	0	genome.wustl.edu	37	X	49643278	49643278	+	RNA	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	49643278	49643278	C	-	DEL	USP27X-AS1	ENST00000437322	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	USP27X-AS1	HGNC	ENSG00000234390	tier1			8	0	0.00	1	15	93.75
USP29	0	genome.wustl.edu	37	19	57640238	57640239	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	57640238	57640239	-	A	INS	USP29	ENST00000254181	human	ensembl	74_37	+1	known	frame_shift_ins	c.195_196	p.R67fs	0.000:0.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP29	HGNC	ENSG00000131864	tier1			27	0	0.00	25	17	40.48
USP31	0	genome.wustl.edu	37	16	23085053	23085053	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	23085053	23085053	G	T	SNP	USP31	ENST00000219689	human	ensembl	74_37	-1	known	missense	c.2325	p.S775R	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP31	HGNC	ENSG00000103404	tier1	-	-	33	0	0.00	20	3	13.04
USP32P2	0	genome.wustl.edu	37	17	18415649	18415649	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	18415649	18415649	G	T	SNP	USP32P2	ENST00000412260	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.074	-	-	-	no_errors	USP32P2	HGNC	ENSG00000233327	tier1	-	-	55	0	0.00	45	5	10.00
USP34	0	genome.wustl.edu	37	2	61438924	61438924	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	61438924	61438924	G	A	SNP	USP34	ENST00000398571	human	ensembl	74_37	-1	known	silent	c.8823	p.C2941	1.000	superfamily_ARM-type_fold	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP34	HGNC	ENSG00000115464	tier1	-	-	48	0	0.00	38	26	40.62
USP36	0	genome.wustl.edu	37	17	76799558	76799558	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	76799558	76799558	C	T	SNP	USP36	ENST00000312010	human	ensembl	74_37	-1	known	missense	c.2719	p.G907S	0.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP36	HGNC	ENSG00000055483	tier1	rs200106890	-	77	0	0.00	30	18	37.50
USP37	0	genome.wustl.edu	37	2	219344406	219344406	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	219344406	219344406	T	C	SNP	USP37	ENST00000258399	human	ensembl	74_37	-1	known	missense	c.1868	p.N623S	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Ubiquitin-int_motif,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_Peptidase_C19/C67	-	no_errors	USP37	HGNC	ENSG00000135913	tier1	-	-	26	0	0.00	25	13	34.21
USP40	0	genome.wustl.edu	37	2	234474223	234474223	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	234474223	234474223	A	-	DEL	USP40	ENST00000450966	human	ensembl	74_37	-1	known	frame_shift_del	c.14	p.L5fs	0.901	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP40	HGNC	ENSG00000085982	tier1			20	0	0.00	6	4	40.00
USP47	0	genome.wustl.edu	37	11	11969622	11969622	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	11969622	11969622	C	T	SNP	USP47	ENST00000399455	human	ensembl	74_37	+1	known	silent	c.3282	p.S1094	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP47	HGNC	ENSG00000170242	tier1	-	-	24	0	0.00	28	20	41.67
USP48	0	genome.wustl.edu	37	1	22033386	22033387	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	22033386	22033387	AA	-	DEL	USP48	ENST00000529637	human	ensembl	74_37	-1	novel	frame_shift_del	c.1975_1974	p.S659fs	0.000:0.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67,pfscan_Ubiquitin_supergroup	-	no_errors	USP48	HGNC	ENSG00000090686	tier1			22	0	0.00	19	7	26.92
USP48	0	genome.wustl.edu	37	1	22016515	22016515	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	22016515	22016515	G	T	SNP	USP48	ENST00000308271	human	ensembl	74_37	-1	known	silent	c.2961	p.A987	0.998	pfscan_Ubiquitin_supergroup	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67,pfscan_Ubiquitin_supergroup	-	no_errors	USP48	HGNC	ENSG00000090686				34	0	0.00	29	3	9.38
USP7	0	genome.wustl.edu	37	16	9017259	9017259	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	9017259	9017259	G	A	SNP	USP7	ENST00000344836	human	ensembl	74_37	-1	known	missense	c.196	p.R66C	1.000	superfamily_TRAF-like	pfam_Peptidase_C19/C67,pfam_MATH,pfam_USP7_ICP0-binding_dom,superfamily_TRAF-like,smart_MATH,pfscan_MATH,pfscan_Peptidase_C19/C67	-	no_errors	USP7	HGNC	ENSG00000187555	tier1	-	-	41	0	0.00	16	10	38.46
USP9X	0	genome.wustl.edu	37	X	41029818	41029818	+	Silent	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	41029818	41029818	T	C	SNP	USP9X	ENST00000324545	human	ensembl	74_37	+1	known	silent	c.2973	p.G991	0.969	NULL	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP9X	HGNC	ENSG00000124486	tier1	-	-	59	0	0.00	10	52	83.87
USP9Y	0	genome.wustl.edu	37	Y	14968773	14968776	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	Y	14968773	14968776	AAAA	-	DEL	USP9Y	ENST00000471409	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.995:0.996:0.998:1.000	-	-	-	no_errors	USP9Y	HGNC	ENSG00000114374	tier1			25	0	0.00	4	18	81.82
UTP18	0	genome.wustl.edu	37	17	49338044	49338044	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	49338044	49338044	G	-	DEL	UTP18	ENST00000225298	human	ensembl	74_37	+1	known	frame_shift_del	c.99	p.P35fs	0.002	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	UTP18	HGNC	ENSG00000011260	tier1			32	0	0.00	17	12	41.38
UTP20	0	genome.wustl.edu	37	12	101680157	101680157	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	101680157	101680157	T	-	DEL	UTP20	ENST00000261637	human	ensembl	74_37	+1	known	frame_shift_del	c.385	p.L131fs	1.000	superfamily_ARM-type_fold	pfam_DRIM,superfamily_ARM-type_fold	-	no_errors	UTP20	HGNC	ENSG00000120800	tier1			50	0	0.00	29	14	32.56
UTP20	0	genome.wustl.edu	37	12	101739437	101739437	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	101739437	101739437	G	T	SNP	UTP20	ENST00000261637	human	ensembl	74_37	+1	known	nonsense	c.4711	p.E1571*	1.000	superfamily_ARM-type_fold	pfam_DRIM,superfamily_ARM-type_fold	-	no_errors	UTP20	HGNC	ENSG00000120800				35	0	0.00	37	2	5.13
VANGL1	0	genome.wustl.edu	37	1	116226673	116226673	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	116226673	116226673	G	A	SNP	VANGL1	ENST00000310260	human	ensembl	74_37	+1	known	missense	c.1055	p.R352Q	0.998	pfam_Strabismus,pirsf_Strabismus	pfam_Strabismus,pirsf_Strabismus	-	no_errors	VANGL1	HGNC	ENSG00000173218	tier1	-	-	52	0	0.00	22	12	35.29
VAX1	0	genome.wustl.edu	37	10	118893539	118893539	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	118893539	118893539	C	T	SNP	VAX1	ENST00000369206	human	ensembl	74_37	-1	known	missense	c.985	p.E329K	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	VAX1	HGNC	ENSG00000148704	tier1	-	-	54	0	0.00	28	26	48.15
VCAN	0	genome.wustl.edu	37	5	82786221	82786221	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	82786221	82786221	G	A	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	silent	c.375	p.A125	0.068	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427	tier1	-	-	30	0	0.00	19	13	40.62
VEPH1	0	genome.wustl.edu	37	3	157081227	157081227	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	157081227	157081227	T	-	DEL	VEPH1	ENST00000362010	human	ensembl	74_37	-1	known	frame_shift_del	c.1661	p.N554fs	1.000	NULL	pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	VEPH1	HGNC	ENSG00000197415	tier1			53	0	0.00	28	15	34.88
VILL	0	genome.wustl.edu	37	3	38040859	38040859	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	38040859	38040859	G	T	SNP	VILL	ENST00000283713	human	ensembl	74_37	+1	known	missense	c.1111	p.G371C	0.938	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	VILL	HGNC	ENSG00000136059	tier1	-	-	50	0	0.00	14	6	30.00
VPS13C	0	genome.wustl.edu	37	15	62244050	62244050	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	62244050	62244050	T	0	DEL	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	frame_shift_del	c.4429	p.I1477fs	0.829	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003				52	0	0.00	55	4	6.78
VPS13D	0	genome.wustl.edu	37	1	12387744	12387744	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	12387744	12387744	C	T	SNP	VPS13D	ENST00000358136	human	ensembl	74_37	+1	known	missense	c.8030	p.A2677V	1.000	superfamily_UBA-like	pfam_VPSAP_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	VPS13D	HGNC	ENSG00000048707	tier1	-	-	72	0	0.00	68	40	37.04
VPS36	0	genome.wustl.edu	37	13	52999941	52999942	+	RNA	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	52999941	52999942	-	A	INS	VPS36	ENST00000492650	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.001	-	-	-	no_errors	VPS36	HGNC	ENSG00000136100	tier1			13	0	0.00	13	7	35.00
VPS39	0	genome.wustl.edu	37	15	42479523	42479523	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	42479523	42479523	C	T	SNP	VPS39	ENST00000348544	human	ensembl	74_37	-1	known	silent	c.513	p.A171	0.399	pfam_Citron,superfamily_WD40_repeat_dom,smart_Citron	pfam_Citron,pfam_VPS39/TGF_beta_rcpt-assoc_2,pfam_VPS39/TGF_beta_rcpt-assoc_1,pfam_Clathrin_H-chain/VPS_repeat,superfamily_WD40_repeat_dom,smart_Citron	-	no_errors	VPS39	HGNC	ENSG00000166887	tier1	rs149434119	-	35	0	0.00	23	14	37.84
VRK2	0	genome.wustl.edu	37	2	58373508	58373509	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	58373508	58373509	-	A	INS	VRK2	ENST00000340157	human	ensembl	74_37	+1	known	frame_shift_ins	c.1081_1082	p.V364fs	0.001:0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	VRK2	HGNC	ENSG00000028116	tier1			21	0	0.00	17	10	37.04
VSIG10	0	genome.wustl.edu	37	12	118517261	118517261	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	118517261	118517261	A	C	SNP	VSIG10	ENST00000359236	human	ensembl	74_37	-1	known	missense	c.815	p.L272R	0.892	pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	VSIG10	HGNC	ENSG00000176834	tier1	-	-	41	0	0.00	34	4	10.53
VSIG4	0	genome.wustl.edu	37	X	65244881	65244881	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	65244881	65244881	T	C	SNP	VSIG4	ENST00000374737	human	ensembl	74_37	-1	known	missense	c.926	p.K309R	0.098	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	VSIG4	HGNC	ENSG00000155659	tier1	-	-	15	0	0.00	4	14	77.78
VSIG8	0	genome.wustl.edu	37	1	159827704	159827704	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	159827704	159827704	G	A	SNP	VSIG8	ENST00000368100	human	ensembl	74_37	-1	known	silent	c.483	p.N161	0.667	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	VSIG8	HGNC	ENSG00000243284				57	0	0.00	73	4	5.19
VSNL1	0	genome.wustl.edu	37	2	17836516	17836516	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	17836516	17836516	G	A	SNP	VSNL1	ENST00000295156	human	ensembl	74_37	+1	known	missense	c.431	p.G144D	0.999	prints_Recoverin	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	VSNL1	HGNC	ENSG00000163032	tier1	-	-	17	0	0.00	10	6	37.50
VSNL1	0	genome.wustl.edu	37	2	17836616	17836616	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	17836616	17836616	C	T	SNP	VSNL1	ENST00000295156	human	ensembl	74_37	+1	known	silent	c.531	p.S177	1.000	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	VSNL1	HGNC	ENSG00000163032				18	0	0.00	18	2	10.00
VSTM2A	0	genome.wustl.edu	37	7	54621750	54621750	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	54621750	54621750	C	T	SNP	VSTM2A	ENST00000404951	human	ensembl	74_37	+1	putative	silent	c.825	p.C275	0.000	NULL	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	VSTM2A	HGNC	ENSG00000170419	tier1	-	-	51	0	0.00	18	15	45.45
VSTM2B	0	genome.wustl.edu	37	19	30020813	30020813	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	30020813	30020813	G	A	SNP	VSTM2B	ENST00000335523	human	ensembl	74_37	+1	known	missense	c.385	p.V129M	1.000	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	VSTM2B	HGNC	ENSG00000187135	tier1	-	-	71	0	0.00	18	22	55.00
VWA1	0	genome.wustl.edu	37	1	1372492	1372492	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	1372492	1372492	C	T	SNP	VWA1	ENST00000476993	human	ensembl	74_37	+1	known	missense	c.259	p.P87S	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	VWA1	HGNC	ENSG00000179403	tier1	-	-	109	0	0.00	46	24	33.80
VWA3B	0	genome.wustl.edu	37	2	98804579	98804579	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	98804579	98804579	C	T	SNP	VWA3B	ENST00000477737	human	ensembl	74_37	+1	known	missense	c.1453	p.R485W	0.364	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA3B	HGNC	ENSG00000168658	tier1	rs200956872	-	159	0	0.00	102	58	36.25
WAPAL	0	genome.wustl.edu	37	10	88196508	88196508	+	RNA	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	88196508	88196508	G	T	SNP	WAPAL	ENST00000484070	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	WAPAL	HGNC	ENSG00000062650	tier1	-	-	62	0	0.00	82	5	5.75
WASF2	0	genome.wustl.edu	37	1	27742509	27742509	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	27742509	27742509	C	A	SNP	WASF2	ENST00000430629	human	ensembl	74_37	-1	known	missense	c.507	p.K169N	1.000	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF2	HGNC	ENSG00000158195	tier1	-	-	97	0	0.00	95	49	34.03
WASF3	0	genome.wustl.edu	37	13	27259944	27259944	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	27259944	27259944	G	A	SNP	WASF3	ENST00000335327	human	ensembl	74_37	+1	known	missense	c.1471	p.D491N	1.000	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF3	HGNC	ENSG00000132970	tier1	-	-	27	0	0.00	28	12	30.00
WASIR2	0	genome.wustl.edu	37	16	74640	74640	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	74640	74640	C	T	SNP	WASIR2	ENST00000329244	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.044	-	-	-	no_errors	WASIR2	HGNC	ENSG00000231439				35	0	0.00	21	4	16.00
WASL	0	genome.wustl.edu	37	7	123332485	123332485	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	123332485	123332485	T	-	DEL	WASL	ENST00000223023	human	ensembl	74_37	-1	known	frame_shift_del	c.1263	p.V422fs	1.000	pfam_WH2_dom,superfamily_WASP_C,smart_WH2_dom,pfscan_WH2_dom	pfam_WH1/EVH1,pfam_CRIB_dom,pfam_WH2_dom,superfamily_WASP_C,smart_WH1/EVH1,smart_CRIB_dom,smart_WH2_dom,pfscan_CRIB_dom,pfscan_WH1/EVH1,pfscan_WH2_dom	-	no_errors	WASL	HGNC	ENSG00000106299	tier1			45	0	0.00	23	9	28.12
WBP2NL	0	genome.wustl.edu	37	22	42399163	42399166	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	42399163	42399166	AAAA	-	DEL	WBP2NL	ENST00000461730	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.027:0.025:0.028:0.037	-	-	-	no_errors	WBP2NL	HGNC	ENSG00000183066	tier1			58	0	0.00	26	37	58.73
WDFY1	0	genome.wustl.edu	37	2	224770667	224770667	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	224770667	224770667	G	T	SNP	WDFY1	ENST00000233055	human	ensembl	74_37	-1	known	missense	c.331	p.P111T	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_Znf_FYVE,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,smart_WD40_repeat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDFY1	HGNC	ENSG00000085449	tier1	-	-	63	0	0.00	49	5	9.26
WDR17	0	genome.wustl.edu	37	4	177058691	177058691	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	177058691	177058691	G	-	DEL	WDR17	ENST00000280190	human	ensembl	74_37	+1	known	frame_shift_del	c.1360	p.G455fs	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR17	HGNC	ENSG00000150627	tier1			96	0	0.00	67	27	28.72
WDR19	0	genome.wustl.edu	37	4	39206803	39206804	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	39206803	39206804	-	T	INS	WDR19	ENST00000399820	human	ensembl	74_37	+1	known	frame_shift_ins	c.633_634	p.L213fs	0.993:0.998	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR19	HGNC	ENSG00000157796	tier1			47	0	0.00	30	21	41.18
WDR41	0	genome.wustl.edu	37	5	76732211	76732212	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	76732211	76732212	-	A	INS	WDR41	ENST00000296679	human	ensembl	74_37	-1	known	frame_shift_ins	c.1102_1101	p.N367fs	1.000:1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR41	HGNC	ENSG00000164253	tier1			72	0	0.00	53	24	31.17
WDR66	0	genome.wustl.edu	37	12	122405917	122405917	+	Silent	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	122405917	122405917	A	T	SNP	WDR66	ENST00000288912	human	ensembl	74_37	+1	known	silent	c.2613	p.G871	0.797	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR66	HGNC	ENSG00000158023	tier1	-	-	66	0	0.00	50	14	21.88
WDR7	0	genome.wustl.edu	37	18	54363659	54363659	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	54363659	54363659	T	C	SNP	WDR7	ENST00000254442	human	ensembl	74_37	+1	known	missense	c.1544	p.I515T	1.000	superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR7	HGNC	ENSG00000091157	tier1	-	-	71	0	0.00	46	31	40.26
WDR7	0	genome.wustl.edu	37	18	54423951	54423951	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	54423951	54423951	G	T	SNP	WDR7	ENST00000254442	human	ensembl	74_37	+1	known	missense	c.2127	p.R709S	1.000	NULL	pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR7	HGNC	ENSG00000091157	tier1	-	-	52	0	0.00	65	4	5.80
WDR81	0	genome.wustl.edu	37	17	1619894	1619894	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	1619894	1619894	C	A	SNP	WDR81	ENST00000437219	human	ensembl	74_37	+1	known	missense	c.25	p.L9M	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR81	HGNC	ENSG00000167716	tier1	-	-	41	0	0.00	28	14	33.33
WDR90	0	genome.wustl.edu	37	16	708575	708575	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	708575	708575	C	T	SNP	WDR90	ENST00000549091	human	ensembl	74_37	+1	novel	silent	c.2817	p.D939	0.060	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,pfam_DUF667,pfam_Nucleoporin_Nup160,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR90	HGNC	ENSG00000161996	tier1	-	-	63	0	0.00	25	21	43.75
WDR90	0	genome.wustl.edu	37	16	712011	712011	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	712011	712011	C	T	SNP	WDR90	ENST00000549091	human	ensembl	74_37	+1	novel	missense	c.3985	p.R1329C	0.000	superfamily_Quinonprotein_ADH-like_supfam,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_DUF667,pfam_Nucleoporin_Nup160,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR90	HGNC	ENSG00000161996	tier1	-	-	29	0	0.00	9	12	57.14
WDTC1	0	genome.wustl.edu	37	1	27621108	27621108	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	27621108	27621108	G	-	DEL	WDTC1	ENST00000319394	human	ensembl	74_37	+1	known	frame_shift_del	c.861	p.E290fs	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_TPR_repeat,pfscan_TPR-contain_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDTC1	HGNC	ENSG00000142784	tier1			45	0	0.00	29	18	38.30
WDTC1	0	genome.wustl.edu	37	1	27622891	27622891	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	27622891	27622891	G	T	SNP	WDTC1	ENST00000319394	human	ensembl	74_37	+1	known	silent	c.948	p.G316	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_TPR_repeat,pfscan_TPR-contain_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDTC1	HGNC	ENSG00000142784	tier1	-	-	53	0	0.00	68	5	6.85
WHAMM	0	genome.wustl.edu	37	15	83499658	83499658	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	83499658	83499658	C	T	SNP	WHAMM	ENST00000286760	human	ensembl	74_37	+1	known	missense	c.1949	p.P650L	0.000	NULL	superfamily_tRNA-bd_arm,pfscan_WH2_dom	-	no_errors	WHAMM	HGNC	ENSG00000156232	tier1	-	-	224	0	0.00	212	16	7.02
WHSC1L1	0	genome.wustl.edu	37	8	38174997	38174997	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	38174997	38174997	C	T	SNP	WHSC1L1	ENST00000525081	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	WHSC1L1	HGNC	ENSG00000147548	tier1	-	-	32	0	0.00	39	15	27.78
WIZ	0	genome.wustl.edu	37	19	15549931	15549933	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	15549931	15549933	TCC	-	DEL	WIZ	ENST00000389282	human	ensembl	74_37	-1	known	in_frame_del	c.1730_1728	p.E576in_frame_del	0.082:0.112:0.058	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	WIZ	HGNC	ENSG00000011451	tier1			21	0	0.00	15	6	28.57
WLS	0	genome.wustl.edu	37	1	68603679	68603679	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	68603679	68603679	A	G	SNP	WLS	ENST00000498615	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	WLS	HGNC	ENSG00000116729	tier1	-	-	22	0	0.00	25	6	19.35
WNT16	0	genome.wustl.edu	37	7	120969811	120969811	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	120969811	120969811	G	A	SNP	WNT16	ENST00000222462	human	ensembl	74_37	+1	known	missense	c.286	p.A96T	0.000	pfam_Wnt,smart_Wnt,prints_Wnt16	pfam_Wnt,smart_Wnt,prints_Wnt16,prints_Wnt	-	no_errors	WNT16	HGNC	ENSG00000002745	tier1	-	-	73	0	0.00	24	12	33.33
WNT5A	0	genome.wustl.edu	37	3	55503989	55503989	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	55503989	55503989	A	-	DEL	WNT5A	ENST00000493406	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	WNT5A	HGNC	ENSG00000114251	tier1			29	0	0.00	25	11	30.56
WNT5B	0	genome.wustl.edu	37	12	1755422	1755422	+	RNA	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	1755422	1755422	G	A	SNP	WNT5B	ENST00000545747	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	WNT5B	HGNC	ENSG00000111186	tier1	-	-	35	0	0.00	46	11	18.64
WNT7B	0	genome.wustl.edu	37	22	46327144	46327144	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	22	46327144	46327144	C	T	SNP	WNT7B	ENST00000339464	human	ensembl	74_37	-1	known	missense	c.404	p.R135H	0.985	pfam_Wnt,smart_Wnt,prints_Wnt7	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt7	-	no_errors	WNT7B	HGNC	ENSG00000188064	tier1	-	-	71	0	0.00	48	22	31.43
WNT9B	0	genome.wustl.edu	37	17	44952482	44952482	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	44952482	44952482	C	T	SNP	WNT9B	ENST00000290015	human	ensembl	74_37	+1	known	missense	c.350	p.A117V	1.000	pfam_Wnt,smart_Wnt,prints_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt	-	no_errors	WNT9B	HGNC	ENSG00000158955				96	0	0.00	70	4	5.41
WRAP73	0	genome.wustl.edu	37	1	3548109	3548109	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	3548109	3548109	C	T	SNP	WRAP73	ENST00000270708	human	ensembl	74_37	-1	known	silent	c.1161	p.R387	0.997	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WRAP73	HGNC	ENSG00000116213	tier1	-	-	43	0	0.00	21	6	22.22
WWOX	0	genome.wustl.edu	37	16	78420830	78420830	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	78420830	78420830	T	C	SNP	WWOX	ENST00000566780	human	ensembl	74_37	+1	known	missense	c.590	p.F197S	1.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR	pfam_WW_dom,pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom,prints_Glc/ribitol_DH	-	no_errors	WWOX	HGNC	ENSG00000186153	tier1	-	-	93	0	0.00	17	29	63.04
WWOX	0	genome.wustl.edu	37	16	78466429	78466429	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	78466429	78466429	G	A	SNP	WWOX	ENST00000566780	human	ensembl	74_37	+1	known	missense	c.836	p.R279H	1.000	NULL	pfam_WW_dom,pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom,prints_Glc/ribitol_DH	-	no_errors	WWOX	HGNC	ENSG00000186153				20	0	0.00	11	3	21.43
XCL2	0	genome.wustl.edu	37	1	168510294	168510294	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	168510294	168510294	C	T	SNP	XCL2	ENST00000367819	human	ensembl	74_37	-1	known	missense	c.241	p.V81I	0.000	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_XCL1	-	no_errors	XCL2	HGNC	ENSG00000143185	tier1	-	-	221	0	0.00	202	88	30.34
XIST	0	genome.wustl.edu	37	X	73071132	73071132	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	73071132	73071132	C	T	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	tier1	-	-	35	0	0.00	4	21	84.00
XPO6	0	genome.wustl.edu	37	16	28164033	28164033	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	28164033	28164033	G	T	SNP	XPO6	ENST00000304658	human	ensembl	74_37	-1	known	missense	c.1171	p.Q391K	1.000	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO6	HGNC	ENSG00000169180	tier1	-	-	30	0	0.00	27	4	12.90
XPOT	0	genome.wustl.edu	37	12	64812733	64812733	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	64812733	64812733	G	A	SNP	XPOT	ENST00000332707	human	ensembl	74_37	+1	known	silent	c.348	p.E116	0.939	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPOT	HGNC	ENSG00000184575				77	0	0.00	88	5	5.38
XRCC5	0	genome.wustl.edu	37	2	216986826	216986826	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	216986826	216986826	G	T	SNP	XRCC5	ENST00000392132	human	ensembl	74_37	+1	known	missense	c.533	p.R178I	1.000	pfam_Ku_N,smart_VWF_A	pfam_Ku_N,pfam_Ku_PK_bind,pfam_Ku70/Ku80_beta-barrel_dom,pfam_Ku_C,superfamily_SPOC_like_C_dom,superfamily_Ku_PK_bind,smart_VWF_A,smart_Ku70/Ku80_beta-barrel_dom	-	no_errors	XRCC5	HGNC	ENSG00000079246				85	0	0.00	76	4	5.00
XYLT1	0	genome.wustl.edu	37	16	17292232	17292232	+	Silent	SNP	T	T	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	17292232	17292232	T	G	SNP	XYLT1	ENST00000261381	human	ensembl	74_37	-1	known	silent	c.1126	p.R376	0.974	pfam_Glyco_trans_14	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT1	HGNC	ENSG00000103489	tier1	-	-	79	0	0.00	38	24	38.71
XYLT2	0	genome.wustl.edu	37	17	48431259	48431259	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	48431259	48431259	C	T	SNP	XYLT2	ENST00000017003	human	ensembl	74_37	+1	known	missense	c.404	p.A135V	0.811	NULL	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT2	HGNC	ENSG00000015532	tier1	-	-	19	0	0.00	12	9	42.86
XYLT2	0	genome.wustl.edu	37	17	48433967	48433967	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	48433967	48433967	C	-	DEL	XYLT2	ENST00000017003	human	ensembl	74_37	+1	known	frame_shift_del	c.1578	p.G529fs	1.000	pfam_XylT	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT2	HGNC	ENSG00000015532	tier1			35	0	0.00	9	15	62.50
YBEY	0	genome.wustl.edu	37	21	47707039	47707040	+	Splice_Site	INS	-	-	AA			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	21	47707039	47707040	-	AA	INS	YBEY	ENST00000329319	human	ensembl	74_37	+1	known	splice_site_ins	c.210+2_210+1	e1+2	1.000:0.124	-	-	-	no_errors	YBEY	HGNC	ENSG00000182362	tier1			22	0	0.00	31	4	11.43
YJEFN3	0	genome.wustl.edu	37	19	19646460	19646460	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	19646460	19646460	C	-	DEL	YJEFN3	ENST00000514277	human	ensembl	74_37	+1	known	frame_shift_del	c.666	p.L224fs	1.000	pfam_YjeF_N_dom,superfamily_YjeF_N_dom,tigrfam_YjeF_N_dom	pfam_YjeF_N_dom,superfamily_YjeF_N_dom,tigrfam_YjeF_N_dom	-	no_errors	YJEFN3	HGNC	ENSG00000250067	tier1			29	0	0.00	18	7	28.00
YLPM1	0	genome.wustl.edu	37	14	75248115	75248115	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	75248115	75248115	C	T	SNP	YLPM1	ENST00000325680	human	ensembl	74_37	+1	known	nonsense	c.1369	p.R457*	0.974	NULL	superfamily_P-loop_NTPase	-	no_errors	YLPM1	HGNC	ENSG00000119596	tier1	-	-	53	0	0.00	29	29	50.00
YY1	0	genome.wustl.edu	37	14	100728643	100728644	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	100728643	100728644	-	A	INS	YY1	ENST00000262238	human	ensembl	74_37	+1	known	frame_shift_ins	c.682_683	p.D231fs	1.000:1.000	pirsf_TF_Yin_yang	pfam_Znf_C2H2,smart_Znf_C2H2-like,pirsf_TF_Yin_yang,pfscan_Znf_C2H2	-	no_errors	YY1	HGNC	ENSG00000100811	tier1			55	0	0.00	36	22	37.93
ZAK	0	genome.wustl.edu	37	2	174062830	174062830	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	174062830	174062830	A	-	DEL	ZAK	ENST00000375213	human	ensembl	74_37	+1	known	frame_shift_del	c.659	p.N222fs	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SAM_type1,pfam_SAM_2,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MLTK	Uniprot_gn	ENSG00000091436	tier1			63	0	0.00	44	30	40.54
ZAN	0	genome.wustl.edu	37	7	100350086	100350086	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	100350086	100350086	A	C	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	missense	c.2358	p.K786N	0.000	NULL	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839	tier1	-	-	48	0	0.00	28	24	46.15
ZAP70	0	genome.wustl.edu	37	2	98351785	98351785	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	98351785	98351785	C	T	SNP	ZAP70	ENST00000264972	human	ensembl	74_37	+1	known	silent	c.1155	p.R385	0.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,superfamily_Kinase-like_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_SH2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ZAP70	HGNC	ENSG00000115085	tier1	rs193922633	-	62	0	0.00	24	13	35.14
ZBTB17	0	genome.wustl.edu	37	1	16269019	16269019	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	16269019	16269019	C	T	SNP	ZBTB17	ENST00000462525	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.091	-	-	-	no_errors	ZBTB17	HGNC	ENSG00000116809	tier1	-	-	46	0	0.00	28	13	31.71
ZBTB20	0	genome.wustl.edu	37	3	114058003	114058003	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	114058003	114058003	G	-	DEL	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	frame_shift_del	c.2075	p.P692fs	0.678	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722	tier1			69	0	0.00	29	27	48.21
ZBTB20	0	genome.wustl.edu	37	3	114070354	114070354	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	114070354	114070354	G	A	SNP	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	missense	c.571	p.R191C	0.997	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722	tier1	-	-	33	0	0.00	21	10	32.26
ZBTB22	0	genome.wustl.edu	37	6	33283669	33283669	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	33283669	33283669	C	-	DEL	ZBTB22	ENST00000418724	human	ensembl	74_37	-1	known	frame_shift_del	c.1025	p.G342fs	0.026	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB22	HGNC	ENSG00000236104	tier1			48	0	0.00	16	8	33.33
ZBTB3	0	genome.wustl.edu	37	11	62521141	62521141	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	62521141	62521141	C	T	SNP	ZBTB3	ENST00000394807	human	ensembl	74_37	-1	known	missense	c.146	p.G49D	1.000	superfamily_BTB/POZ_fold	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB3	HGNC	ENSG00000185670				12	0	0.00	7	5	41.67
ZBTB38	0	genome.wustl.edu	37	3	141164136	141164136	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	141164136	141164136	A	G	SNP	ZBTB38	ENST00000321464	human	ensembl	74_37	+1	known	missense	c.2909	p.K970R	0.060	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB38	HGNC	ENSG00000177311	tier1	-	-	18	0	0.00	5	4	44.44
ZBTB7B	0	genome.wustl.edu	37	1	154987852	154987852	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	154987852	154987852	C	T	SNP	ZBTB7B	ENST00000417934	human	ensembl	74_37	+1	known	missense	c.818	p.A273V	0.000	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB7B	HGNC	ENSG00000160685				21	0	0.00	8	3	27.27
ZBTB7C	0	genome.wustl.edu	37	18	45566519	45566519	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	45566519	45566519	C	-	DEL	ZBTB7C	ENST00000332053	human	ensembl	74_37	-1	known	frame_shift_del	c.960	p.P321fs	0.989	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB7C	HGNC	ENSG00000184828	tier1			66	0	0.00	27	12	30.77
ZC3H18	0	genome.wustl.edu	37	16	88665107	88665107	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	88665107	88665107	G	A	SNP	ZC3H18	ENST00000301011	human	ensembl	74_37	+1	known	missense	c.917	p.R306Q	1.000	NULL	smart_Znf_CCCH	-	no_errors	ZC3H18	HGNC	ENSG00000158545	tier1	-	-	34	0	0.00	25	7	21.88
ZC3H6	0	genome.wustl.edu	37	2	113067570	113067570	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	113067570	113067570	G	T	SNP	ZC3H6	ENST00000343936	human	ensembl	74_37	+1	known	missense	c.445	p.G149C	0.999	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H6	HGNC	ENSG00000188177				37	0	0.00	42	3	6.67
ZC3HAV1	0	genome.wustl.edu	37	7	138764917	138764917	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	138764917	138764917	C	T	SNP	ZC3HAV1	ENST00000242351	human	ensembl	74_37	-1	known	missense	c.770	p.S257N	0.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	ZC3HAV1	HGNC	ENSG00000105939	tier1	-	-	58	0	0.00	25	23	47.92
ZC3HAV1	0	genome.wustl.edu	37	7	138774372	138774372	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	138774372	138774372	C	T	SNP	ZC3HAV1	ENST00000242351	human	ensembl	74_37	-1	known	missense	c.442	p.E148K	0.995	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	ZC3HAV1	HGNC	ENSG00000105939	tier1	-	-	23	0	0.00	11	10	47.62
ZC3HC1	0	genome.wustl.edu	37	7	129688937	129688937	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	129688937	129688937	G	A	SNP	ZC3HC1	ENST00000358303	human	ensembl	74_37	-1	known	missense	c.194	p.A65V	0.967	NULL	pfam_Znf_C3HC-like,pfam_NIPA/Rsm1	-	no_errors	ZC3HC1	HGNC	ENSG00000091732	tier1	-	-	79	0	0.00	51	31	37.80
ZDBF2	0	genome.wustl.edu	37	2	207172739	207172739	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	207172739	207172739	G	T	SNP	ZDBF2	ENST00000374423	human	ensembl	74_37	+1	known	missense	c.3487	p.D1163Y	0.014	NULL	pfam_Znf_DBF,smart_Znf_DBF	-	no_errors	ZDBF2	HGNC	ENSG00000204186	tier1	-	-	41	0	0.00	48	4	7.69
ZDHHC14	0	genome.wustl.edu	37	6	157963736	157963736	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	157963736	157963736	G	A	SNP	ZDHHC14	ENST00000359775	human	ensembl	74_37	+1	known	missense	c.365	p.R122Q	0.992	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC14	HGNC	ENSG00000175048	tier1	-	-	32	0	0.00	26	16	38.10
ZDHHC15	0	genome.wustl.edu	37	X	74636973	74636973	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	74636973	74636973	G	T	SNP	ZDHHC15	ENST00000373367	human	ensembl	74_37	-1	known	missense	c.916	p.P306T	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,superfamily_Plexin-like_fold,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC15	HGNC	ENSG00000102383	tier1	-	-	53	0	0.00	9	41	82.00
ZDHHC15	0	genome.wustl.edu	37	X	74636981	74636981	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	74636981	74636981	G	T	SNP	ZDHHC15	ENST00000373367	human	ensembl	74_37	-1	known	nonsense	c.908	p.S303*	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,superfamily_Plexin-like_fold,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC15	HGNC	ENSG00000102383	tier1	-	-	51	0	0.00	40	4	9.09
ZDHHC19	0	genome.wustl.edu	37	3	195934356	195934356	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	195934356	195934356	G	A	SNP	ZDHHC19	ENST00000296326	human	ensembl	74_37	-1	known	silent	c.600	p.S200	0.316	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC19	HGNC	ENSG00000163958	tier1	-	-	24	0	0.00	10	14	58.33
ZDHHC3	0	genome.wustl.edu	37	3	45000845	45000845	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	45000845	45000845	G	-	DEL	ZDHHC3	ENST00000296127	human	ensembl	74_37	-1	known	frame_shift_del	c.84	p.Y29fs	0.665	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC3	HGNC	ENSG00000163812	tier1			40	0	0.00	14	12	46.15
ZDHHC7	0	genome.wustl.edu	37	16	85010039	85010039	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	85010039	85010039	G	-	DEL	ZDHHC7	ENST00000344861	human	ensembl	74_37	-1	known	frame_shift_del	c.948	p.S317fs	0.902	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC7	HGNC	ENSG00000153786	tier1			36	0	0.00	16	6	27.27
ZFAND4	0	genome.wustl.edu	37	10	46121400	46121400	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	46121400	46121400	A	-	DEL	ZFAND4	ENST00000344646	human	ensembl	74_37	-1	known	frame_shift_del	c.1871	p.L624fs	0.871	NULL	pfam_Ubiquitin_dom,pfam_Znf_AN1,smart_Ubiquitin_dom,smart_Znf_AN1,pfscan_Znf_AN1,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	ZFAND4	HGNC	ENSG00000172671	tier1			19	0	0.00	19	16	45.71
ZFAT	0	genome.wustl.edu	37	8	135614876	135614878	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	135614876	135614878	CTT	-	DEL	ZFAT	ENST00000377838	human	ensembl	74_37	-1	known	in_frame_del	c.1086_1084	p.K362in_frame_del	1.000:1.000:1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFAT	HGNC	ENSG00000066827	tier1			57	0	0.00	29	11	27.50
ZFHX3	0	genome.wustl.edu	37	16	72822521	72822521	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	72822521	72822521	C	T	SNP	ZFHX3	ENST00000268489	human	ensembl	74_37	-1	known	silent	c.9654	p.P3218	0.110	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836	tier1	-	-	101	0	0.00	40	42	51.22
ZFHX3	0	genome.wustl.edu	37	16	72822738	72822738	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	72822738	72822738	G	A	SNP	ZFHX3	ENST00000268489	human	ensembl	74_37	-1	known	missense	c.9437	p.S3146F	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836	tier1	-	-	69	0	0.00	63	10	13.70
ZFHX4	0	genome.wustl.edu	37	8	77616580	77616580	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	77616580	77616580	C	T	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.257	p.A86V	1.000	smart_Znf_C2H2-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	54	0	0.00	52	23	30.67
ZFHX4	0	genome.wustl.edu	37	8	77767965	77767965	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	77767965	77767965	G	T	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.8808	p.M2936I	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656				29	0	0.00	28	2	6.67
ZFP1	0	genome.wustl.edu	37	16	75203538	75203539	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	75203538	75203539	-	A	INS	ZFP1	ENST00000393430	human	ensembl	74_37	+1	known	frame_shift_ins	c.530_531	p.N179fs	0.862:0.295	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP1	HGNC	ENSG00000184517	tier1			14	0	0.00	13	5	27.78
ZFR	0	genome.wustl.edu	37	5	32403232	32403232	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	32403232	32403232	T	C	SNP	ZFR	ENST00000265069	human	ensembl	74_37	-1	known	missense	c.1495	p.T499A	1.000	NULL	pfam_DZF,pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like,smart_DZF	-	no_errors	ZFR	HGNC	ENSG00000056097	tier1	-	-	71	0	0.00	91	34	27.20
ZFR2	0	genome.wustl.edu	37	19	3807217	3807217	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	3807217	3807217	C	T	SNP	ZFR2	ENST00000262961	human	ensembl	74_37	-1	known	missense	c.2596	p.E866K	0.034	pfam_DZF,smart_DZF	pfam_DZF,smart_Znf_U1,smart_Znf_C2H2-like,smart_DZF	-	no_errors	ZFR2	HGNC	ENSG00000105278	tier1	rs200032828	-	18	0	0.00	10	7	41.18
ZFYVE28	0	genome.wustl.edu	37	4	2343248	2343248	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	4	2343248	2343248	A	G	SNP	ZFYVE28	ENST00000290974	human	ensembl	74_37	-1	known	missense	c.275	p.I92T	1.000	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE28	HGNC	ENSG00000159733				61	0	0.00	37	3	7.50
ZGLP1	0	genome.wustl.edu	37	19	10419281	10419281	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	10419281	10419281	G	A	SNP	ZGLP1	ENST00000403903	human	ensembl	74_37	-1	known	missense	c.77	p.P26L	0.000	NULL	pfam_Znf_GATA,smart_Znf_GATA,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	ZGLP1	HGNC	ENSG00000220201	tier1	-	-	61	0	0.00	34	39	53.42
ZGPAT	0	genome.wustl.edu	37	20	62366250	62366250	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	62366250	62366250	C	T	SNP	ZGPAT	ENST00000478385	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.134	-	-	-	no_errors	ZGPAT	HGNC	ENSG00000197114	tier1	-	-	38	0	0.00	24	27	52.94
ZIC2	0	genome.wustl.edu	37	13	100635007	100635008	+	In_Frame_Ins	INS	-	-	CCA			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	100635007	100635008	-	CCA	INS	ZIC2	ENST00000376335	human	ensembl	74_37	+1	known	in_frame_ins	c.689_690	p.234in_frame_insH	1.000:0.990	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC2	HGNC	ENSG00000043355	tier1			38	0	0.00	33	4	10.81
ZIC4	0	genome.wustl.edu	37	3	147104255	147104255	+	RNA	SNP	T	T	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	147104255	147104255	T	A	SNP	ZIC4	ENST00000472749	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZIC4	HGNC	ENSG00000174963	tier1	-	-	31	0	0.00	19	19	50.00
ZIC4	0	genome.wustl.edu	37	3	147124448	147124450	+	RNA	DEL	ACA	ACA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	ACA	ACA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	147124448	147124450	ACA	-	DEL	ZIC4	ENST00000464144	human	ensembl	74_37	-1	putative	rna	NULL	NULL	1.000:1.000:1.000	-	-	-	no_errors	ZIC4	HGNC	ENSG00000174963	tier1			40	0	0.00	18	9	33.33
ZIC5	0	genome.wustl.edu	37	13	100622616	100622616	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	100622616	100622616	C	T	SNP	ZIC5	ENST00000267294	human	ensembl	74_37	-1	known	missense	c.1314	p.M438I	1.000	smart_Znf_C2H2-like	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC5	HGNC	ENSG00000139800	tier1	-	-	42	0	0.00	30	11	26.83
ZMAT4	0	genome.wustl.edu	37	8	40554909	40554909	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	40554909	40554909	G	A	SNP	ZMAT4	ENST00000297737	human	ensembl	74_37	-1	known	silent	c.204	p.A68	0.966	NULL	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like	-	no_errors	ZMAT4	HGNC	ENSG00000165061	tier1	rs149820458	-	68	0	0.00	60	23	27.38
ZMYM2	0	genome.wustl.edu	37	13	20610980	20610980	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	20610980	20610980	A	G	SNP	ZMYM2	ENST00000382869	human	ensembl	74_37	+1	known	silent	c.2223	p.E741	0.997	pfam_Znf_MYM,smart_TRASH_dom	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM2	HGNC	ENSG00000121741	tier1	-	-	53	0	0.00	29	34	53.97
ZMYM2	0	genome.wustl.edu	37	13	20641084	20641084	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	20641084	20641084	G	A	SNP	ZMYM2	ENST00000382869	human	ensembl	74_37	+1	known	missense	c.3226	p.V1076I	0.999	NULL	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM2	HGNC	ENSG00000121741	tier1	-	-	48	0	0.00	55	21	27.63
ZMYM2	0	genome.wustl.edu	37	13	20567457	20567457	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	13	20567457	20567457	T	C	SNP	ZMYM2	ENST00000382869	human	ensembl	74_37	+1	known	missense	c.245	p.I82T	0.988	NULL	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM2	HGNC	ENSG00000121741				31	0	0.00	45	3	6.25
ZMYM6	0	genome.wustl.edu	37	1	35485090	35485090	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	35485090	35485090	T	-	DEL	ZMYM6	ENST00000357182	human	ensembl	74_37	-1	known	frame_shift_del	c.292	p.M98fs	1.000	pfam_Znf_MYM,smart_TRASH_dom	pfam_Znf_MYM,superfamily_RNaseH-like_dom,smart_TRASH_dom	-	no_errors	ZMYM6	HGNC	ENSG00000163867	tier1			53	0	0.00	36	24	40.00
ZMYND15	0	genome.wustl.edu	37	17	4646651	4646651	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	17	4646651	4646651	A	G	SNP	ZMYND15	ENST00000433935	human	ensembl	74_37	+1	known	missense	c.1198	p.T400A	1.000	NULL	pfam_Znf_MYND,pfscan_Znf_MYND	-	no_errors	ZMYND15	HGNC	ENSG00000141497	tier1	-	-	64	0	0.00	40	18	30.51
ZMYND19	0	genome.wustl.edu	37	9	140482038	140482038	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	140482038	140482038	A	-	DEL	ZMYND19	ENST00000471957	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ZMYND19	HGNC	ENSG00000165724	tier1			27	0	0.00	15	9	37.50
ZNF140	0	genome.wustl.edu	37	12	133682867	133682867	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	12	133682867	133682867	G	T	SNP	ZNF140	ENST00000355557	human	ensembl	74_37	+1	known	missense	c.1004	p.R335M	0.974	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF140	HGNC	ENSG00000196387	tier1	-	-	70	0	0.00	61	5	7.58
ZNF180	0	genome.wustl.edu	37	19	44981824	44981824	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	44981824	44981824	C	A	SNP	ZNF180	ENST00000221327	human	ensembl	74_37	-1	known	nonsense	c.874	p.E292*	0.007	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF180	HGNC	ENSG00000167384	tier1	-	-	59	0	0.00	41	35	45.45
ZNF185	0	genome.wustl.edu	37	X	152105006	152105006	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	152105006	152105006	A	G	SNP	ZNF185	ENST00000370270	human	ensembl	74_37	+1	known	missense	c.1163	p.D388G	0.000	NULL	smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	ZNF185	HGNC	ENSG00000147394	tier1	-	-	21	0	0.00	3	22	88.00
ZNF202	0	genome.wustl.edu	37	11	123599869	123599869	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	11	123599869	123599869	A	T	SNP	ZNF202	ENST00000336139	human	ensembl	74_37	-1	known	missense	c.667	p.S223T	0.021	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF202	HGNC	ENSG00000166261	tier1	-	-	35	0	0.00	22	11	33.33
ZNF205	0	genome.wustl.edu	37	16	3170161	3170161	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	3170161	3170161	C	T	SNP	ZNF205	ENST00000219091	human	ensembl	74_37	+1	known	silent	c.1500	p.G500	0.601	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF205	HGNC	ENSG00000122386	tier1	-	-	73	0	0.00	27	22	44.90
ZNF236	0	genome.wustl.edu	37	18	74593430	74593430	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	74593430	74593430	A	-	DEL	ZNF236	ENST00000253159	human	ensembl	74_37	+1	known	frame_shift_del	c.1373	p.M461fs	0.988	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF236	HGNC	ENSG00000130856	tier1			34	0	0.00	16	5	23.81
ZNF25	0	genome.wustl.edu	37	10	38239495	38239498	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	38239495	38239498	TTTT	-	DEL	ZNF25	ENST00000374633	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.000:0.001:0.003	-	-	-	no_errors	ZNF25	HGNC	ENSG00000175395	tier1			25	0	0.00	4	6	60.00
ZNF253	0	genome.wustl.edu	37	19	20002726	20002726	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	20002726	20002726	G	A	SNP	ZNF253	ENST00000589717	human	ensembl	74_37	+1	known	missense	c.670	p.G224R	0.986	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF253	HGNC	ENSG00000256771	tier1	-	-	40	0	0.00	41	35	46.05
ZNF271	0	genome.wustl.edu	37	18	32888075	32888076	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	32888075	32888076	AA	-	DEL	ZNF271	ENST00000399070	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.019:0.042	-	-	-	no_errors	ZNF271	HGNC	ENSG00000257267	tier1			40	0	0.00	28	8	22.22
ZNF271	0	genome.wustl.edu	37	18	32888394	32888394	+	RNA	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	32888394	32888394	A	G	SNP	ZNF271	ENST00000399070	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.465	-	-	-	no_errors	ZNF271	HGNC	ENSG00000257267	tier1	-	-	37	0	0.00	22	8	26.67
ZNF277	0	genome.wustl.edu	37	7	111970237	111970237	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	111970237	111970237	G	T	SNP	ZNF277	ENST00000361822	human	ensembl	74_37	+1	known	missense	c.767	p.R256I	0.948	NULL	pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF277	HGNC	ENSG00000198839				54	0	0.00	49	3	5.77
ZNF280D	0	genome.wustl.edu	37	15	56958728	56958728	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	56958728	56958728	C	T	SNP	ZNF280D	ENST00000267807	human	ensembl	74_37	-1	known	missense	c.1859	p.R620H	0.984	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF280D	HGNC	ENSG00000137871	tier1	-	-	59	0	0.00	42	40	48.78
ZNF292	0	genome.wustl.edu	37	6	87969484	87969484	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	6	87969484	87969484	A	0	DEL	ZNF292	ENST00000369577	human	ensembl	74_37	+1	known	frame_shift_del	c.6137	p.S2049fs	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994				13	0	0.00	5	4	44.44
ZNF345	0	genome.wustl.edu	37	19	37383887	37383887	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	37383887	37383887	C	T	SNP	ZNF345	ENST00000526123	human	ensembl	74_37	+1	putative	missense	c.214	p.R72C	0.000	NULL	NULL	-	no_errors	ZNF345	HGNC	ENSG00000251247	tier1	-	-	10	0	0.00	4	4	50.00
ZNF385D	0	genome.wustl.edu	37	3	21465453	21465454	+	Splice_Site	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	3	21465453	21465454	-	C	INS	ZNF385D	ENST00000281523	human	ensembl	74_37	-1	known	splice_site_ins	c.954+1_954+1	e7+1	1.000:1.000	-	-	-	no_errors	ZNF385D	HGNC	ENSG00000151789	tier1			34	0	0.00	29	14	32.56
ZNF395	0	genome.wustl.edu	37	8	28217266	28217266	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	28217266	28217266	C	T	SNP	ZNF395	ENST00000344423	human	ensembl	74_37	-1	known	missense	c.316	p.V106I	0.366	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF395	HGNC	ENSG00000186918				29	0	0.00	21	2	8.70
ZNF407	0	genome.wustl.edu	37	18	72346707	72346707	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	72346707	72346707	C	-	DEL	ZNF407	ENST00000299687	human	ensembl	74_37	+1	known	frame_shift_del	c.3732	p.H1246fs	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,smart_Znf_U1,pfscan_Znf_C2H2	-	no_errors	ZNF407	HGNC	ENSG00000215421	tier1			25	0	0.00	23	10	30.30
ZNF425	0	genome.wustl.edu	37	7	148802071	148802071	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	148802071	148802071	C	T	SNP	ZNF425	ENST00000378061	human	ensembl	74_37	-1	known	missense	c.892	p.G298R	0.012	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	ZNF425	HGNC	ENSG00000204947	tier1	-	-	32	0	0.00	19	20	51.28
ZNF440	0	genome.wustl.edu	37	19	11941145	11941145	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	11941145	11941145	G	T	SNP	ZNF440	ENST00000304060	human	ensembl	74_37	+1	known	missense	c.51	p.E17D	0.997	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF440	HGNC	ENSG00000171295	tier1	-	-	167	0	0.00	110	78	41.49
ZNF441	0	genome.wustl.edu	37	19	11891613	11891613	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	11891613	11891613	G	T	SNP	ZNF441	ENST00000357901	human	ensembl	74_37	+1	known	missense	c.974	p.R325I	0.003	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF441	HGNC	ENSG00000197044	tier1	-	-	71	0	0.00	81	6	6.90
ZNF461	0	genome.wustl.edu	37	19	37128585	37128588	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	37128585	37128588	AAAA	-	DEL	ZNF461	ENST00000589442	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.035:0.037:0.040:0.038	-	-	-	no_errors	ZNF461	HGNC	ENSG00000197808	tier1			33	0	0.00	15	8	34.78
ZNF469	0	genome.wustl.edu	37	16	88497681	88497681	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	88497681	88497681	C	A	SNP	ZNF469	ENST00000437464	human	ensembl	74_37	+1	known	missense	c.3719	p.P1240Q	0.008	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF469	HGNC	ENSG00000225614	tier1	-	-	34	0	0.00	11	13	54.17
ZNF469	0	genome.wustl.edu	37	16	88499417	88499417	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	88499417	88499417	G	A	SNP	ZNF469	ENST00000437464	human	ensembl	74_37	+1	known	missense	c.5455	p.A1819T	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF469	HGNC	ENSG00000225614	tier1	-	-	71	0	0.00	23	20	45.45
ZNF469	0	genome.wustl.edu	37	16	88504203	88504203	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	88504203	88504203	G	0	DEL	ZNF469	ENST00000437464	human	ensembl	74_37	+1	known	frame_shift_del	c.10241	p.R3417fs	0.002	pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF469	HGNC	ENSG00000225614				13	0	0.00	8	3	27.27
ZNF471	0	genome.wustl.edu	37	19	57035841	57035841	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	57035841	57035841	G	A	SNP	ZNF471	ENST00000308031	human	ensembl	74_37	+1	known	missense	c.405	p.M135I	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF471	HGNC	ENSG00000196263	tier1	-	-	36	0	0.00	29	14	32.56
ZNF479	0	genome.wustl.edu	37	7	57200022	57200022	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	57200022	57200022	T	-	DEL	ZNF479	ENST00000331162	human	ensembl	74_37	-1	known	frame_shift_del	c.10	p.R4fs	0.094	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF479	HGNC	ENSG00000185177	tier1			151	0	0.00	108	35	24.48
ZNF480	0	genome.wustl.edu	37	19	52803666	52803666	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	52803666	52803666	A	G	SNP	ZNF480	ENST00000468240	human	ensembl	74_37	+1	known	missense	c.1	p.M1V	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF480	HGNC	ENSG00000198464	tier1	-	-	148	0	0.00	87	50	36.50
ZNF496	0	genome.wustl.edu	37	1	247464137	247464137	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	247464137	247464137	C	T	SNP	ZNF496	ENST00000366498	human	ensembl	74_37	-1	known	missense	c.1556	p.R519Q	0.533	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF496	HGNC	ENSG00000162714	tier1	-	-	45	0	0.00	43	14	24.56
ZNF500	0	genome.wustl.edu	37	16	4802783	4802783	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	4802783	4802783	G	A	SNP	ZNF500	ENST00000219478	human	ensembl	74_37	-1	known	missense	c.1037	p.T346I	0.945	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF500	HGNC	ENSG00000103199	tier1	-	-	93	0	0.00	47	21	30.88
ZNF517	0	genome.wustl.edu	37	8	146033029	146033029	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	146033029	146033029	G	A	SNP	ZNF517	ENST00000359971	human	ensembl	74_37	+1	known	missense	c.728	p.R243Q	0.926	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF517	HGNC	ENSG00000197363	tier1	-	-	36	0	0.00	33	16	32.65
ZNF521	0	genome.wustl.edu	37	18	22805739	22805739	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	22805739	22805739	C	T	SNP	ZNF521	ENST00000361524	human	ensembl	74_37	-1	known	missense	c.2143	p.D715N	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF521	HGNC	ENSG00000198795	tier1	-	-	57	0	0.00	20	17	45.95
ZNF532	0	genome.wustl.edu	37	18	56646399	56646399	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	18	56646399	56646399	C	T	SNP	ZNF532	ENST00000336078	human	ensembl	74_37	+1	known	missense	c.3263	p.S1088L	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF532	HGNC	ENSG00000074657	tier1	-	-	10	0	0.00	9	7	43.75
ZNF540	0	genome.wustl.edu	37	19	38103492	38103492	+	Silent	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	38103492	38103492	A	G	SNP	ZNF540	ENST00000316433	human	ensembl	74_37	+1	known	silent	c.1311	p.K437	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF540	HGNC	ENSG00000171817	tier1	-	-	33	0	0.00	68	5	6.85
ZNF541	0	genome.wustl.edu	37	19	48025197	48025197	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	48025197	48025197	T	-	DEL	ZNF541	ENST00000314121	human	ensembl	74_37	-1	known	frame_shift_del	c.3682	p.M1228fs	0.998	superfamily_Homeodomain-like,smart_SANT/Myb	pfam_ELM2_dom,pfam_Znf_C2H2,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_SANT/Myb,pfscan_ELM2_dom,pfscan_Znf_C2H2	-	no_errors	ZNF541	HGNC	ENSG00000118156	tier1			66	0	0.00	42	20	32.26
ZNF552	0	genome.wustl.edu	37	19	58320156	58320156	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	58320156	58320156	C	A	SNP	ZNF552	ENST00000391701	human	ensembl	74_37	-1	known	missense	c.476	p.R159M	0.017	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF552	HGNC	ENSG00000178935	tier1	-	-	146	0	0.00	79	51	39.23
ZNF57	0	genome.wustl.edu	37	19	2915522	2915522	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	2915522	2915522	C	T	SNP	ZNF57	ENST00000306908	human	ensembl	74_37	+1	known	silent	c.6	p.D2	0.009	superfamily_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF57	HGNC	ENSG00000171970	tier1	-	-	118	0	0.00	96	26	21.31
ZNF572	0	genome.wustl.edu	37	8	125987893	125987893	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	125987893	125987893	A	-	DEL	ZNF572	ENST00000319286	human	ensembl	74_37	+1	known	frame_shift_del	c.11	p.K6fs	0.002	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF572	HGNC	ENSG00000180938	tier1			80	0	0.00	90	31	25.62
ZNF574	0	genome.wustl.edu	37	19	42585085	42585085	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	42585085	42585085	G	A	SNP	ZNF574	ENST00000222339	human	ensembl	74_37	+1	known	missense	c.2597	p.R866H	0.976	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF574	HGNC	ENSG00000105732	tier1	-	-	25	0	0.00	12	4	25.00
ZNF578	0	genome.wustl.edu	37	19	53005160	53005160	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	53005160	53005160	A	G	SNP	ZNF578	ENST00000421239	human	ensembl	74_37	+1	known	missense	c.62	p.Q21R	0.032	superfamily_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF578	HGNC	ENSG00000258405	tier1	-	-	112	0	0.00	64	25	28.09
ZNF578	0	genome.wustl.edu	37	19	53013904	53013904	+	Silent	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	53013904	53013904	G	A	SNP	ZNF578	ENST00000421239	human	ensembl	74_37	+1	known	silent	c.270	p.L90	0.000	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF578	HGNC	ENSG00000258405	tier1	-	-	179	0	0.00	100	57	36.31
ZNF585B	0	genome.wustl.edu	37	19	37677212	37677212	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	37677212	37677212	C	T	SNP	ZNF585B	ENST00000532828	human	ensembl	74_37	-1	known	silent	c.1227	p.S409	0.006	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF585B	HGNC	ENSG00000245680	tier1	-	-	86	0	0.00	66	41	38.32
ZNF587B	0	genome.wustl.edu	37	19	58353877	58353877	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	58353877	58353877	A	-	DEL	ZNF587B	ENST00000594901	human	ensembl	74_37	+1	novel	frame_shift_del	c.1835	p.K614fs	0.973	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF587B	HGNC	ENSG00000269343	tier1			57	0	0.00	47	27	36.49
ZNF608	0	genome.wustl.edu	37	5	123972614	123972616	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	5	123972614	123972616	AAA	-	DEL	ZNF608	ENST00000513985	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.200:0.479:0.970	-	-	-	no_errors	ZNF608	HGNC	ENSG00000168916	tier1			8	0	0.00	3	3	50.00
ZNF609	0	genome.wustl.edu	37	15	64967247	64967247	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	15	64967247	64967247	A	-	DEL	ZNF609	ENST00000326648	human	ensembl	74_37	+1	known	frame_shift_del	c.2194	p.K734fs	1.000	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF609	HGNC	ENSG00000180357	tier1			15	0	0.00	18	8	30.77
ZNF618	0	genome.wustl.edu	37	9	116812464	116812464	+	RNA	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	116812464	116812464	A	-	DEL	ZNF618	ENST00000470105	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	ZNF618	HGNC	ENSG00000157657	tier1			31	0	0.00	17	7	29.17
ZNF646	0	genome.wustl.edu	37	16	31091609	31091609	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	31091609	31091609	G	A	SNP	ZNF646	ENST00000300850	human	ensembl	74_37	+1	known	missense	c.3964	p.E1322K	0.514	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF646	HGNC	ENSG00000167395	tier1	-	-	28	0	0.00	10	6	37.50
ZNF653	0	genome.wustl.edu	37	19	11597920	11597920	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	11597920	11597920	G	T	SNP	ZNF653	ENST00000293771	human	ensembl	74_37	-1	known	missense	c.1225	p.P409T	0.944	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF653	HGNC	ENSG00000161914	tier1	-	-	63	0	0.00	33	4	10.81
ZNF671	0	genome.wustl.edu	37	19	58238698	58238698	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	58238698	58238698	G	A	SNP	ZNF671	ENST00000600125	human	ensembl	74_37	-1	known	missense	c.199	p.P67S	0.000	NULL	NULL	-	no_errors	ZNF671	HGNC	ENSG00000083814	tier1	-	-	43	0	0.00	14	17	54.84
ZNF672	0	genome.wustl.edu	37	1	249142523	249142523	+	Silent	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	249142523	249142523	C	T	SNP	ZNF672	ENST00000306562	human	ensembl	74_37	+1	known	silent	c.1050	p.C350	0.075	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF672	HGNC	ENSG00000171161	tier1	-	-	83	0	0.00	53	18	25.35
ZNF680	0	genome.wustl.edu	37	7	63981718	63981719	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	63981718	63981719	-	A	INS	ZNF680	ENST00000309683	human	ensembl	74_37	-1	known	frame_shift_ins	c.1414_1413	p.N471fs	0.986:0.998	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF680	HGNC	ENSG00000173041	tier1			37	0	0.00	33	13	28.26
ZNF687	0	genome.wustl.edu	37	1	151259034	151259035	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	151259034	151259035	TG	0	DEL	ZNF687	ENST00000324048	human	ensembl	74_37	+1	known	frame_shift_del	c.267_268	p.C91fs	0.998:1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF687	HGNC	ENSG00000143373				38	0	0.00	31	6	16.22
ZNF699	0	genome.wustl.edu	37	19	9413157	9413157	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	9413157	9413157	C	A	SNP	ZNF699	ENST00000308650	human	ensembl	74_37	-1	known	silent	c.72	p.V24	1.000	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF699	HGNC	ENSG00000196110	tier1	-	-	102	0	0.00	58	48	45.28
ZNF704	0	genome.wustl.edu	37	8	81550825	81550826	+	RNA	DEL	AA	AA	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	8	81550825	81550826	AA	-	DEL	ZNF704	ENST00000517379	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ZNF704	HGNC	ENSG00000164684	tier1			25	0	0.00	27	16	37.21
ZNF708	0	genome.wustl.edu	37	19	21476363	21476363	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	21476363	21476363	T	-	DEL	ZNF708	ENST00000356929	human	ensembl	74_37	-1	known	frame_shift_del	c.1405	p.I469fs	0.997	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF708	HGNC	ENSG00000182141	tier1			41	0	0.00	23	12	34.29
ZNF711	0	genome.wustl.edu	37	X	84520244	84520246	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	X	84520244	84520246	AAG	-	DEL	ZNF711	ENST00000395402	human	ensembl	74_37	+1	known	in_frame_del	c.833_835	p.E280in_frame_del	1.000:0.996:1.000	pfam_Transcrp_activ_Zfx/Zfy-dom	pfam_Transcrp_activ_Zfx/Zfy-dom,pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF711	HGNC	ENSG00000147180	tier1			26	0	0.00	7	10	58.82
ZNF747	0	genome.wustl.edu	37	16	30544043	30544043	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	16	30544043	30544043	C	T	SNP	ZNF747	ENST00000535210	human	ensembl	74_37	-1	known	missense	c.770	p.R257H	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF747	HGNC	ENSG00000169955	tier1	-	-	87	0	0.00	42	40	48.78
ZNF782	0	genome.wustl.edu	37	9	99581848	99581848	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	9	99581848	99581848	G	T	SNP	ZNF782	ENST00000481138	human	ensembl	74_37	-1	known	missense	c.457	p.P153T	0.002	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF782	HGNC	ENSG00000196597	tier1	-	-	89	0	0.00	79	5	5.95
ZNF789	0	genome.wustl.edu	37	7	99084704	99084705	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	99084704	99084705	-	A	INS	ZNF789	ENST00000331410	human	ensembl	74_37	+1	known	frame_shift_ins	c.871_872	p.T293fs	0.985:0.272	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF789	HGNC	ENSG00000198556	tier1			23	0	0.00	14	7	33.33
ZNF791	0	genome.wustl.edu	37	19	12738936	12738936	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	12738936	12738936	G	T	SNP	ZNF791	ENST00000343325	human	ensembl	74_37	+1	known	missense	c.593	p.S198I	0.009	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF791	HGNC	ENSG00000173875	tier1	-	-	67	0	0.00	84	6	6.67
ZNF804A	0	genome.wustl.edu	37	2	185803528	185803528	+	Silent	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	185803528	185803528	C	A	SNP	ZNF804A	ENST00000302277	human	ensembl	74_37	+1	known	silent	c.3405	p.I1135	0.878	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804A	HGNC	ENSG00000170396	tier1	-	-	35	0	0.00	12	14	53.85
ZNF814	0	genome.wustl.edu	37	19	58361246	58361246	+	RNA	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	58361246	58361246	C	T	SNP	ZNF814	ENST00000597652	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF814	HGNC	ENSG00000204514	tier1	-	-	32	0	0.00	15	4	21.05
ZNF814	0	genome.wustl.edu	37	19	58361249	58361249	+	RNA	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	58361249	58361249	T	C	SNP	ZNF814	ENST00000597652	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF814	HGNC	ENSG00000204514	tier1	-	-	31	0	0.00	15	4	21.05
ZNF831	0	genome.wustl.edu	37	20	57766219	57766220	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	57766219	57766220	-	C	INS	ZNF831	ENST00000371030	human	ensembl	74_37	+1	novel	frame_shift_ins	c.145_146	p.T52fs	0.658:0.643	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF831	HGNC	ENSG00000124203	tier1			44	0	0.00	22	7	24.14
ZNF831	0	genome.wustl.edu	37	20	57766219	57766220	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	20	57766219	57766220	-	CC	INS	ZNF831	ENST00000371030	human	ensembl	74_37	+1	novel	frame_shift_ins	c.145_146	p.T52fs	0.658:0.643	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF831	HGNC	ENSG00000124203	tier1			44	0	0.00	26	3	10.34
ZNF836	0	genome.wustl.edu	37	19	52659253	52659253	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	52659253	52659253	C	A	SNP	ZNF836	ENST00000322146	human	ensembl	74_37	-1	known	missense	c.1683	p.K561N	0.122	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF836	HGNC	ENSG00000196267	tier1	-	-	68	0	0.00	47	27	36.49
ZNF839	0	genome.wustl.edu	37	14	102802052	102802052	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	14	102802052	102802052	T	-	DEL	ZNF839	ENST00000442396	human	ensembl	74_37	+1	known	frame_shift_del	c.1536	p.F514fs	0.519	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF839	HGNC	ENSG00000022976	tier1			146	0	0.00	95	19	16.67
ZNF90	0	genome.wustl.edu	37	19	20228702	20228702	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	20228702	20228702	A	-	DEL	ZNF90	ENST00000418063	human	ensembl	74_37	+1	known	frame_shift_del	c.339	p.G116fs	0.054	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF90	HGNC	ENSG00000213988	tier1			68	0	0.00	67	29	30.21
ZNF91	0	genome.wustl.edu	37	19	23543033	23543033	+	Silent	SNP	G	G	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	23543033	23543033	G	T	SNP	ZNF91	ENST00000300619	human	ensembl	74_37	-1	known	silent	c.2748	p.G916	0.978	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF91	HGNC	ENSG00000167232	tier1	-	-	32	0	0.00	24	23	48.94
ZNHIT1	0	genome.wustl.edu	37	7	100865942	100865942	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	7	100865942	100865942	G	A	SNP	ZNHIT1	ENST00000305105	human	ensembl	74_37	+1	known	missense	c.80	p.R27H	1.000	NULL	pfam_Znf_HIT,pfscan_Znf_HIT	-	no_errors	ZNHIT1	HGNC	ENSG00000106400	tier1	rs200966635	-	95	0	0.00	71	6	7.79
ZRANB1	0	genome.wustl.edu	37	10	126673561	126673561	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	10	126673561	126673561	A	-	DEL	ZRANB1	ENST00000359653	human	ensembl	74_37	+1	known	frame_shift_del	c.2127	p.*709fs	0.994	NULL	pfam_OTU,pfam_Znf_RanBP2,smart_Znf_RanBP2,pfscan_OTU,pfscan_Znf_RanBP2	-	no_errors	ZRANB1	HGNC	ENSG00000019995	tier1			24	0	0.00	12	6	33.33
ZRANB2	0	genome.wustl.edu	37	1	71531565	71531566	+	RNA	INS	-	-	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	71531565	71531566	-	T	INS	ZRANB2	ENST00000477096	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999:0.998	-	-	-	no_errors	ZRANB2	HGNC	ENSG00000132485	tier1			27	0	0.00	21	9	30.00
ZRANB3	0	genome.wustl.edu	37	2	135982051	135982051	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	2	135982051	135982051	T	C	SNP	ZRANB3	ENST00000264159	human	ensembl	74_37	-1	known	missense	c.2195	p.D732G	0.875	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_HNH,pfam_Znf_RanBP2,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Znf_RanBP2,smart_HNH_nuc,pfscan_Znf_RanBP2,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ZRANB3	HGNC	ENSG00000121988	tier1	-	-	63	0	0.00	40	17	29.82
ZSCAN1	0	genome.wustl.edu	37	19	58549418	58549418	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	19	58549418	58549418	C	T	SNP	ZSCAN1	ENST00000282326	human	ensembl	74_37	+1	known	missense	c.214	p.R72C	0.001	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,pfscan_Tscrpt_reg_SCAN	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN1	HGNC	ENSG00000152467	tier1	-	-	44	0	0.00	19	25	56.82
ZYG11A	0	genome.wustl.edu	37	1	53322739	53322739	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OI-01A-11D-A27G-09	TCGA-L5-A4OI-11A-11D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a040342e-679b-48af-a607-1f1b98eaa24d	078e053e-e15f-4a28-8c24-8a82eb59a338	1	53322739	53322739	A	-	DEL	ZYG11A	ENST00000371528	human	ensembl	74_37	+1	known	frame_shift_del	c.326	p.A111fs	0.974	NULL	superfamily_ARM-type_fold	-	no_errors	ZYG11A	HGNC	ENSG00000203995	tier1			44	0	0.00	20	8	28.57
