Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
A2ML1	0	genome.wustl.edu	37	12	9013757	9013757	+	Silent	SNP	G	G	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	12	9013757	9013757	G	C	SNP	A2ML1	ENST00000299698	human	ensembl	74_37	+1	known	silent	c.3366	p.R1122	0.314	pfam_A2M_comp,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_A2M_comp,pfam_Macroglobln_a2,pfam_A2M_N_2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	A2ML1	HGNC	ENSG00000166535	tier1	-	-	60	0	0.00	57	8	12.31
ABCA13	0	genome.wustl.edu	37	7	48431574	48431574	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	48431574	48431574	A	G	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	missense	c.11711	p.K3904R	0.997	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	tier1	-	-	77	0	0.00	58	5	7.94
ABCC12	0	genome.wustl.edu	37	16	48119527	48119527	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	48119527	48119527	G	A	SNP	ABCC12	ENST00000311303	human	ensembl	74_37	-1	known	nonsense	c.3805	p.R1269*	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC12	HGNC	ENSG00000140798	tier1	-	-	54	0	0.00	54	14	20.59
ABHD12B	0	genome.wustl.edu	37	14	51345478	51345478	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	14	51345478	51345478	T	C	SNP	ABHD12B	ENST00000337334	human	ensembl	74_37	+1	known	missense	c.248	p.L83P	0.997	NULL	pfam_AB_hydrolase_1,pfam_Peptidase_S9,pfam_X-Pro-like_dom	-	no_errors	ABHD12B	HGNC	ENSG00000131969	tier1	-	-	59	0	0.00	51	6	10.53
ABHD6	0	genome.wustl.edu	37	3	58270864	58270864	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	58270864	58270864	A	C	SNP	ABHD6	ENST00000295962	human	ensembl	74_37	+1	known	missense	c.734	p.K245T	0.815	pfam_Ndr	pfam_AB_hydrolase_1,pfam_Ndr,prints_AB_hydrolase_1,prints_Epox_hydrolase-like	-	no_errors	ABHD6	HGNC	ENSG00000163686	tier1	-	-	102	0	0.00	63	16	20.25
ADAM18	0	genome.wustl.edu	37	8	39496040	39496040	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	8	39496040	39496040	A	T	SNP	ADAM18	ENST00000265707	human	ensembl	74_37	+1	known	missense	c.884	p.K295I	0.004	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B	-	no_errors	ADAM18	HGNC	ENSG00000168619	tier1	-	-	85	0	0.00	49	10	16.95
ADAM2	0	genome.wustl.edu	37	8	39645738	39645738	+	Silent	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	8	39645738	39645738	C	T	SNP	ADAM2	ENST00000265708	human	ensembl	74_37	-1	known	silent	c.675	p.L225	0.428	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM2	HGNC	ENSG00000104755	tier1	-	-	35	0	0.00	31	6	16.22
AHNAK	0	genome.wustl.edu	37	11	62299594	62299594	+	Silent	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	62299594	62299594	C	T	SNP	AHNAK	ENST00000378024	human	ensembl	74_37	-1	known	silent	c.2295	p.E765	0.999	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942	tier1	-	-	183	0	0.00	130	49	27.37
ANKRD12	0	genome.wustl.edu	37	18	9279564	9279564	+	Silent	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	18	9279564	9279564	T	G	SNP	ANKRD12	ENST00000262126	human	ensembl	74_37	+1	known	silent	c.5925	p.T1975	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD12	HGNC	ENSG00000101745	tier1	-	-	80	0	0.00	75	5	6.25
ANKS3	0	genome.wustl.edu	37	16	4751504	4751504	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	4751504	4751504	G	A	SNP	ANKS3	ENST00000304283	human	ensembl	74_37	-1	known	silent	c.1050	p.S350	1.000	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS3	HGNC	ENSG00000168096	tier1	-	-	55	0	0.00	45	9	16.67
APOB	0	genome.wustl.edu	37	2	21225692	21225692	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	21225692	21225692	C	A	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.12602	p.R4201I	0.331	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674				18	0	0.00	25	2	7.41
ARHGAP31	0	genome.wustl.edu	37	3	119133553	119133553	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	119133553	119133553	C	T	SNP	ARHGAP31	ENST00000264245	human	ensembl	74_37	+1	known	missense	c.2777	p.A926V	0.890	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP31	HGNC	ENSG00000031081	tier1	-	-	35	0	0.00	34	4	10.53
ARSK	0	genome.wustl.edu	37	5	94918845	94918845	+	Silent	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	94918845	94918845	T	G	SNP	ARSK	ENST00000380009	human	ensembl	74_37	+1	known	silent	c.642	p.S214	0.988	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSK	HGNC	ENSG00000164291	tier1	-	-	64	0	0.00	58	6	9.38
ATP1A2	0	genome.wustl.edu	37	1	160105239	160105239	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	160105239	160105239	G	A	SNP	ATP1A2	ENST00000361216	human	ensembl	74_37	+1	known	missense	c.2131	p.V711M	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A2	HGNC	ENSG00000018625	tier1	-	-	88	0	0.00	46	39	45.88
ATR	0	genome.wustl.edu	37	3	142272730	142272730	+	Silent	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	142272730	142272730	A	C	SNP	ATR	ENST00000350721	human	ensembl	74_37	-1	known	silent	c.2469	p.A823	1.000	superfamily_ARM-type_fold,pfscan_HEAT_type_2	pfam_PI3/4_kinase_cat_dom,pfam_PIK-rel_kinase_FAT,pfam_UME,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_UME,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_HEAT_type_2,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATR	HGNC	ENSG00000175054	tier1	-	-	47	0	0.00	51	7	12.07
C10orf71	0	genome.wustl.edu	37	10	50531190	50531190	+	Silent	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	10	50531190	50531190	T	C	SNP	C10orf71	ENST00000374144	human	ensembl	74_37	+1	known	silent	c.600	p.A200	0.957	NULL	NULL	-	no_errors	C10orf71	HGNC	ENSG00000177354				47	0	0.00	46	3	6.12
C10orf88	0	genome.wustl.edu	37	10	124697275	124697275	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	10	124697275	124697275	T	C	SNP	C10orf88	ENST00000481909	human	ensembl	74_37	-1	known	missense	c.1049	p.K350R	0.000	NULL	NULL	-	no_errors	C10orf88	HGNC	ENSG00000119965	tier1	-	-	51	0	0.00	57	8	12.31
C12orf55	0	genome.wustl.edu	37	12	97180615	97180615	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	12	97180615	97180615	T	G	SNP	C12orf55	ENST00000524981	human	ensembl	74_37	+1	putative	missense	c.8618	p.L2873R	0.995	NULL	superfamily_Fibronectin_type3	-	no_errors	C12orf55	HGNC	ENSG00000188596	tier1	-	-	86	0	0.00	41	27	39.71
C16orf89	0	genome.wustl.edu	37	16	5112546	5112546	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	5112546	5112546	C	T	SNP	C16orf89	ENST00000350219	human	ensembl	74_37	-1	known	missense	c.352	p.A118T	0.974	NULL	NULL	-	no_errors	C16orf89	HGNC	ENSG00000153446				34	0	0.00	15	5	25.00
CACNA1A	0	genome.wustl.edu	37	19	13414639	13414639	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	13414639	13414639	G	A	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	silent	c.2046	p.G682	0.951	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837	tier1	-	-	40	0	0.00	39	8	17.02
CAPS2	0	genome.wustl.edu	37	12	75716828	75716828	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	12	75716828	75716828	G	T	SNP	CAPS2	ENST00000409445	human	ensembl	74_37	-1	known	missense	c.274	p.P92T	0.201	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CAPS2	HGNC	ENSG00000180881	tier1	-	-	70	0	0.00	59	4	6.35
CASP5	0	genome.wustl.edu	37	11	104878041	104878041	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	104878041	104878041	T	-	DEL	CASP5	ENST00000393141	human	ensembl	74_37	-1	known	frame_shift_del	c.241	p.T81fs	0.000	pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,pirsf_Caspase_IL-1_beta,pfscan_CARD	pfam_Pept_C14_caspase,pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP5	HGNC	ENSG00000137757	tier1			33	0	0.00	34	3	8.11
CCDC74B	0	genome.wustl.edu	37	2	130900636	130900636	+	Silent	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	130900636	130900636	T	C	SNP	CCDC74B	ENST00000409234	human	ensembl	74_37	-1	putative	silent	c.501	p.G167	0.000	NULL	NULL	-	no_errors	CCDC74B	HGNC	ENSG00000152076	tier1	-	-	100	0	0.00	74	10	11.90
CCDC88A	0	genome.wustl.edu	37	2	55563842	55563842	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	55563842	55563842	G	T	SNP	CCDC88A	ENST00000436346	human	ensembl	74_37	-1	known	missense	c.1631	p.T544K	1.000	pfam_Hook-related_fam	pfam_Hook-related_fam,superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CCDC88A	HGNC	ENSG00000115355				39	0	0.00	32	2	5.88
CD1C	0	genome.wustl.edu	37	1	158261944	158261944	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	158261944	158261944	G	T	SNP	CD1C	ENST00000368170	human	ensembl	74_37	+1	known	missense	c.399	p.Q133H	0.000	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1C	HGNC	ENSG00000158481	tier1	-	-	47	0	0.00	45	4	8.16
CHD1	0	genome.wustl.edu	37	5	98217809	98217809	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	98217809	98217809	C	T	SNP	CHD1	ENST00000284049	human	ensembl	74_37	-1	known	missense	c.2737	p.V913I	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD1	HGNC	ENSG00000153922	tier1	-	-	49	0	0.00	51	6	10.53
CHD3	0	genome.wustl.edu	37	17	7798284	7798284	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	7798284	7798284	A	G	SNP	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	missense	c.1319	p.E440G	1.000	superfamily_Znf_FYVE_PHD	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004	tier1	-	-	62	0	0.00	69	12	14.81
CHL1	0	genome.wustl.edu	37	3	404935	404935	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	404935	404935	G	A	SNP	CHL1	ENST00000256509	human	ensembl	74_37	+1	known	missense	c.1454	p.R485K	0.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CHL1	HGNC	ENSG00000134121	tier1	-	-	62	0	0.00	36	10	21.74
CHST1	0	genome.wustl.edu	37	11	45671102	45671102	+	RNA	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	45671102	45671102	A	G	SNP	CHST1	ENST00000533673	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CHST1	HGNC	ENSG00000175264	tier1	-	-	88	0	0.00	85	7	7.61
CHTF8	0	genome.wustl.edu	37	16	69154483	69154483	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	69154483	69154483	C	A	SNP	CHTF8	ENST00000398235	human	ensembl	74_37	-1	known	missense	c.211	p.A71S	1.000	pfam_Chromosome_trans_fidel_Ctf8	pfam_Chromosome_trans_fidel_Ctf8	-	no_errors	CHTF8	HGNC	ENSG00000168802	tier1	-	-	57	0	0.00	41	5	10.87
CIB2	0	genome.wustl.edu	37	15	78401611	78401611	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	15	78401611	78401611	T	C	SNP	CIB2	ENST00000557917	human	ensembl	74_37	-1	known	missense	c.200	p.E67G	0.654	NULL	NULL	-	no_errors	CIB2	HGNC	ENSG00000136425	tier1	-	-	86	0	0.00	70	23	24.73
CLEC5A	0	genome.wustl.edu	37	7	141631337	141631337	+	RNA	SNP	C	C	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	141631337	141631337	C	G	SNP	CLEC5A	ENST00000470595	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	CLEC5A	HGNC	ENSG00000258227	tier1	-	-	16	0	0.00	10	4	28.57
CNOT6	0	genome.wustl.edu	37	5	179994124	179994124	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	179994124	179994124	G	A	SNP	CNOT6	ENST00000261951	human	ensembl	74_37	+1	known	missense	c.754	p.V252I	1.000	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	pfam_Endo/exonuclease/phosphatase,pfam_Leu-rich_rpt,superfamily_Endo/exonuclease/phosphatase,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	CNOT6	HGNC	ENSG00000113300				56	0	0.00	44	3	6.38
CNTNAP3	0	genome.wustl.edu	37	9	39149870	39149870	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	9	39149870	39149870	A	C	SNP	CNTNAP3	ENST00000297668	human	ensembl	74_37	-1	known	missense	c.1582	p.L528V	0.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP3	HGNC	ENSG00000106714	tier1	-	-	89	0	0.00	75	13	14.77
COL11A1	0	genome.wustl.edu	37	1	103491143	103491143	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	103491143	103491143	T	G	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	missense	c.960	p.E320D	0.999	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718	tier1	-	-	53	0	0.00	29	24	45.28
COL5A1	0	genome.wustl.edu	37	9	137704471	137704471	+	Silent	SNP	C	C	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	9	137704471	137704471	C	A	SNP	COL5A1	ENST00000371817	human	ensembl	74_37	+1	known	silent	c.3765	p.G1255	0.999	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A1	HGNC	ENSG00000130635	tier1	-	-	38	0	0.00	22	12	35.29
CPNE4	0	genome.wustl.edu	37	3	131268914	131268914	+	Silent	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	131268914	131268914	T	G	SNP	CPNE4	ENST00000502818	human	ensembl	74_37	-1	known	silent	c.1233	p.G411	0.954	pfam_Copine,smart_VWF_A	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom	-	no_errors	CPNE4	HGNC	ENSG00000196353				39	0	0.00	57	11	15.94
CRMP1	0	genome.wustl.edu	37	4	5838626	5838626	+	Silent	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	4	5838626	5838626	A	G	SNP	CRMP1	ENST00000324989	human	ensembl	74_37	-1	known	silent	c.1318	p.L440	1.000	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	CRMP1	HGNC	ENSG00000072832	tier1	-	-	58	0	0.00	48	9	15.79
CRTC3	0	genome.wustl.edu	37	15	91172647	91172647	+	Silent	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	15	91172647	91172647	T	C	SNP	CRTC3	ENST00000268184	human	ensembl	74_37	+1	known	silent	c.1149	p.S383	0.508	NULL	NULL	-	no_errors	CRTC3	HGNC	ENSG00000140577				24	0	0.00	35	3	7.89
CSMD1	0	genome.wustl.edu	37	8	2832087	2832087	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	8	2832087	2832087	T	G	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.8629	p.T2877P	0.997	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117				50	0	0.00	35	3	7.89
CTSW	0	genome.wustl.edu	37	11	65650545	65650545	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	65650545	65650545	G	T	SNP	CTSW	ENST00000307886	human	ensembl	74_37	+1	known	missense	c.751	p.A251S	0.800	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C	pfam_Peptidase_C1A_C,pfam_Prot_inhib_I29,smart_Prot_inhib_I29,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSW	HGNC	ENSG00000172543	tier1	-	-	47	0	0.00	45	4	8.16
DCLRE1A	0	genome.wustl.edu	37	10	115609147	115609147	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	10	115609147	115609147	T	C	SNP	DCLRE1A	ENST00000361384	human	ensembl	74_37	-1	known	missense	c.1717	p.K573E	0.697	NULL	pfam_DRMBL	-	no_errors	DCLRE1A	HGNC	ENSG00000198924	tier1	-	-	42	0	0.00	40	7	14.89
DLG4	0	genome.wustl.edu	37	17	7099575	7099575	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	7099575	7099575	G	A	SNP	DLG4	ENST00000399510	human	ensembl	74_37	-1	known	missense	c.1394	p.S465F	1.000	pirsf_M-assoc_guanylate_kinase,superfamily_SH3_domain	pirsf_M-assoc_guanylate_kinase,pfam_GK/Ca_channel_bsu,pfam_PDZ,pfam_PDZ_assoc,pfam_MAGUK_PEST_N,pfam_SH3_domain,pfam_SH3_2,pfam_L27_1,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG4	HGNC	ENSG00000132535	tier1	-	-	66	0	0.00	36	27	42.86
DOCK2	0	genome.wustl.edu	37	5	169508960	169508960	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	169508960	169508960	A	G	SNP	DOCK2	ENST00000256935	human	ensembl	74_37	+1	known	missense	c.5402	p.K1801R	1.000	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Cyt_c-like_dom,superfamily_ARM-type_fold,superfamily_Ferritin-like_SF,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK2	HGNC	ENSG00000134516	tier1	rs143896166	-	29	0	0.00	39	5	11.36
DYNC1H1	0	genome.wustl.edu	37	14	102510643	102510643	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	14	102510643	102510643	G	A	SNP	DYNC1H1	ENST00000360184	human	ensembl	74_37	+1	known	silent	c.12717	p.P4239	0.006	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like,smart_AAA+_ATPase	-	no_errors	DYNC1H1	HGNC	ENSG00000197102	tier1	-	-	53	0	0.00	33	15	31.25
DYNC2H1	0	genome.wustl.edu	37	11	103349922	103349922	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	103349922	103349922	G	A	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.12886	p.G4296R	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	53	0	0.00	45	5	9.80
EGF	0	genome.wustl.edu	37	4	110929354	110929354	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	4	110929354	110929354	C	T	SNP	EGF	ENST00000265171	human	ensembl	74_37	+1	known	missense	c.3338	p.P1113L	0.000	pirsf_Pro-epidermal_GF	pirsf_Pro-epidermal_GF,pfam_LDLR_classB_rpt,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt	-	no_errors	EGF	HGNC	ENSG00000138798	tier1	-	-	156	0	0.00	151	22	12.72
EIF5A2	0	genome.wustl.edu	37	3	170612162	170612162	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	170612162	170612162	T	G	SNP	EIF5A2	ENST00000295822	human	ensembl	74_37	-1	known	missense	c.321	p.E107D	0.999	pfam_Transl_elong_IF5A_C,superfamily_NA-bd_OB-fold,pirsf_Transl_elong_IF5A,tigrfam_Transl_elong_IF5A	pfam_Transl_elong_IF5A_C,pfam_KOW,superfamily_Translation_prot_SH3-like,superfamily_NA-bd_OB-fold,pirsf_Transl_elong_IF5A,tigrfam_Transl_elong_IF5A	-	no_errors	EIF5A2	HGNC	ENSG00000163577	tier1	-	-	81	0	0.00	74	13	14.94
ELK4	0	genome.wustl.edu	37	1	205589938	205589938	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	205589938	205589938	T	G	SNP	ELK4	ENST00000357992	human	ensembl	74_37	-1	known	missense	c.236	p.K79T	1.000	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ELK4	HGNC	ENSG00000158711	tier1	-	-	25	0	0.00	26	4	13.33
ELL2	0	genome.wustl.edu	37	5	95236437	95236437	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	95236437	95236437	G	A	SNP	ELL2	ENST00000237853	human	ensembl	74_37	-1	known	missense	c.914	p.S305F	1.000	NULL	pfam_RNA_pol_II_elong_fac_ELL,pfam_Occludin_RNApol2_elong_fac_ELL	-	no_errors	ELL2	HGNC	ENSG00000118985	tier1	-	-	43	0	0.00	35	5	12.50
ENPP6	0	genome.wustl.edu	37	4	185038014	185038014	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	4	185038014	185038014	A	G	SNP	ENPP6	ENST00000296741	human	ensembl	74_37	-1	known	missense	c.850	p.S284P	0.003	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	ENPP6	HGNC	ENSG00000164303	tier1	-	-	50	0	0.00	39	6	13.33
ENSG00000221137	0	genome.wustl.edu	37	8	87670153	87670153	+	RNA	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	8	87670153	87670153	C	T	SNP	ENSG00000221137	ENST00000408210	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.252	-	-	-	no_errors	AC013751.1	Clone_based_ensembl_gene	ENSG00000221137	tier1	-	-	86	0	0.00	54	24	30.77
ENSG00000229180	0	genome.wustl.edu	37	7	66006391	66006391	+	RNA	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	66006391	66006391	C	T	SNP	ENSG00000229180	ENST00000449307	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GS1-124K5.11	Clone_based_vega_gene	ENSG00000229180	tier1	-	-	79	0	0.00	75	8	9.64
ENSG00000231064	0	genome.wustl.edu	37	1	155172948	155172948	+	RNA	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	155172948	155172948	A	G	SNP	ENSG00000231064	ENST00000430312	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-263K19.4	Clone_based_vega_gene	ENSG00000231064	tier1	-	-	81	0	0.00	60	10	14.29
ENSG00000232415	0	genome.wustl.edu	37	7	73474134	73474134	+	RNA	SNP	C	C	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	73474134	73474134	C	G	SNP	ENSG00000232415	ENST00000435932	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.085	-	-	-	no_errors	CTB-51J22.1	Clone_based_vega_gene	ENSG00000232415	tier1	-	-	76	0	0.00	49	53	51.96
ENSG00000240535	0	genome.wustl.edu	37	5	54329903	54329903	+	RNA	SNP	G	G	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	54329903	54329903	G	C	SNP	ENSG00000240535	ENST00000595218	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2313F11.1	Clone_based_vega_gene	ENSG00000240535	tier1	-	-	9	0	0.00	10	4	28.57
ENSG00000257743	0	genome.wustl.edu	37	7	141864709	141864709	+	Silent	SNP	C	C	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	141864709	141864709	C	G	SNP	ENSG00000257743	ENST00000477922	human	ensembl	74_37	+1	putative	silent	c.2538	p.L846	0.000	NULL	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,superfamily_P_trefoil,smart_P_trefoil	-	no_errors	RP11-1220K2.2	Clone_based_vega_gene	ENSG00000257743	tier1	-	-	34	0	0.00	42	20	32.26
ENSG00000258879	0	genome.wustl.edu	37	12	25170150	25170150	+	RNA	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	12	25170150	25170150	T	C	SNP	ENSG00000258879	ENST00000556060	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.181	-	-	-	no_errors	RP11-713N11.5	Clone_based_vega_gene	ENSG00000258879	tier1	-	-	47	0	0.00	69	5	6.76
ENSG00000259966	0	genome.wustl.edu	37	16	32618989	32618989	+	RNA	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	32618989	32618989	G	A	SNP	ENSG00000259966	ENST00000562976	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-652G5.1	Clone_based_vega_gene	ENSG00000259966	tier1	-	-	32	0	0.00	17	33	66.00
ENSG00000270163	0	genome.wustl.edu	37	14	57267296	57267296	+	RNA	DEL	A	A	-			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	14	57267296	57267296	A	-	DEL	ENSG00000270163	ENST00000602485	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-1085N6.6	Clone_based_vega_gene	ENSG00000270163	tier1			8	0	0.00	7	3	30.00
EPHA2	0	genome.wustl.edu	37	1	16461561	16461561	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	16461561	16461561	C	T	SNP	EPHA2	ENST00000358432	human	ensembl	74_37	-1	known	missense	c.1552	p.G518S	0.999	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA2	HGNC	ENSG00000142627	tier1	-	-	62	0	0.00	41	28	40.58
ERBB2	0	genome.wustl.edu	37	17	37880988	37880989	+	In_Frame_Ins	INS	-	-	TGA			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	37880988	37880989	-	TGA	INS	ERBB2	ENST00000269571	human	ensembl	74_37	+1	known	in_frame_ins	c.2317_2318	p.775in_frame_insM	1.000:1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB2	HGNC	ENSG00000141736	tier1			98	0	0.00	100	203	67.00
ERG	0	genome.wustl.edu	37	21	39755716	39755716	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	21	39755716	39755716	C	T	SNP	ERG	ENST00000398919	human	ensembl	74_37	-1	known	missense	c.1070	p.R357H	1.000	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ERG	HGNC	ENSG00000157554				47	0	0.00	34	3	8.11
ERLEC1	0	genome.wustl.edu	37	2	54045062	54045062	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	54045062	54045062	T	G	SNP	ERLEC1	ENST00000185150	human	ensembl	74_37	+1	known	missense	c.1408	p.L470V	1.000	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom	-	no_errors	ERLEC1	HGNC	ENSG00000068912	tier1	-	-	58	0	0.00	56	10	15.15
ESR1	0	genome.wustl.edu	37	6	152129213	152129213	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	152129213	152129213	G	A	SNP	ESR1	ENST00000206249	human	ensembl	74_37	+1	known	missense	c.166	p.E56K	1.000	pfam_Oestr_rcpt,prints_Oestr_rcpt	pfam_Oestr_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Oestr_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	ESR1	HGNC	ENSG00000091831	tier1	-	-	37	0	0.00	35	9	20.45
ETAA1	0	genome.wustl.edu	37	2	67631322	67631322	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	67631322	67631322	T	C	SNP	ETAA1	ENST00000272342	human	ensembl	74_37	+1	known	missense	c.1508	p.L503P	0.000	NULL	NULL	-	no_errors	ETAA1	HGNC	ENSG00000143971	tier1	-	-	33	0	0.00	16	4	20.00
ETAA1	0	genome.wustl.edu	37	2	67631302	67631302	+	Silent	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	67631302	67631302	T	C	SNP	ETAA1	ENST00000272342	human	ensembl	74_37	+1	known	silent	c.1488	p.N496	0.002	NULL	NULL	-	no_errors	ETAA1	HGNC	ENSG00000143971				28	0	0.00	18	2	10.00
EYA3	0	genome.wustl.edu	37	1	28315141	28315141	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	28315141	28315141	G	C	SNP	EYA3	ENST00000373871	human	ensembl	74_37	-1	known	missense	c.1445	p.T482S	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA3	HGNC	ENSG00000158161	tier1	-	-	40	0	0.00	16	13	44.83
FAM194A	0	genome.wustl.edu	37	3	150387187	150387187	+	Silent	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	150387187	150387187	A	C	SNP	FAM194A	ENST00000295910	human	ensembl	74_37	-1	known	silent	c.1395	p.G465	0.259	NULL	NULL	-	no_errors	FAM194A	HGNC	ENSG00000163645	tier1	-	-	60	0	0.00	78	9	10.34
FAM230B	0	genome.wustl.edu	37	22	21537923	21537923	+	RNA	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	22	21537923	21537923	A	G	SNP	FAM230B	ENST00000451257	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.197	-	-	-	no_errors	FAM230B	HGNC	ENSG00000215498	tier1	-	-	99	0	0.00	66	8	10.67
FAM230B	0	genome.wustl.edu	37	22	21538168	21538168	+	RNA	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	22	21538168	21538168	G	A	SNP	FAM230B	ENST00000451257	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM230B	HGNC	ENSG00000215498	tier1	-	-	146	0	0.00	81	13	13.83
FAM65B	0	genome.wustl.edu	37	6	24843223	24843223	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	24843223	24843223	C	A	SNP	FAM65B	ENST00000259698	human	ensembl	74_37	-1	known	missense	c.1787	p.C596F	0.883	NULL	superfamily_ARM-type_fold	-	no_errors	FAM65B	HGNC	ENSG00000111913	tier1	-	-	38	0	0.00	37	5	11.90
FAM86C1	0	genome.wustl.edu	37	11	71498636	71498636	+	Silent	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	71498636	71498636	C	T	SNP	FAM86C1	ENST00000359244	human	ensembl	74_37	+1	known	silent	c.54	p.R18	0.638	NULL	NULL	-	no_errors	FAM86C1	HGNC	ENSG00000158483	tier1	-	-	62	0	0.00	160	11	6.43
FCRL6	0	genome.wustl.edu	37	1	159779891	159779891	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	159779891	159779891	A	T	SNP	FCRL6	ENST00000368106	human	ensembl	74_37	+1	known	missense	c.894	p.Q298H	0.000	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL6	HGNC	ENSG00000181036	tier1	-	-	67	0	0.00	70	20	22.22
FERMT2	0	genome.wustl.edu	37	14	53324533	53324533	+	RNA	SNP	T	T	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	14	53324533	53324533	T	A	SNP	FERMT2	ENST00000557255	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.536	-	-	-	no_errors	FERMT2	HGNC	ENSG00000073712	tier1	-	-	32	0	0.00	18	7	28.00
FLT1	0	genome.wustl.edu	37	13	28897002	28897002	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	13	28897002	28897002	C	T	SNP	FLT1	ENST00000282397	human	ensembl	74_37	-1	known	missense	c.2878	p.V960I	0.980	pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR1_rcpt	-	no_errors	FLT1	HGNC	ENSG00000102755	tier1	-	-	48	0	0.00	37	6	13.95
FMNL3	0	genome.wustl.edu	37	12	50041075	50041075	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	12	50041075	50041075	T	A	SNP	FMNL3	ENST00000293590	human	ensembl	74_37	-1	known	missense	c.2855	p.K952M	1.000	smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FMNL3	HGNC	ENSG00000161791	tier1	-	-	57	0	0.00	42	5	10.64
FMO3	0	genome.wustl.edu	37	1	171086394	171086394	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	171086394	171086394	T	G	SNP	FMO3	ENST00000367755	human	ensembl	74_37	+1	known	missense	c.1411	p.F471V	1.000	pfam_Flavin_mOase-like,pirsf_DiMe-aniline_mOase	pfam_Flavin_mOase-like,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pirsf_DiMe-aniline_mOase,prints_Flavin_mOase,prints_Flavin_mOase_3,prints_Flavin_mOase_1,prints_Flavin_mOase_2	-	no_errors	FMO3	HGNC	ENSG00000007933				43	0	0.00	40	3	6.98
FOCAD	0	genome.wustl.edu	37	9	20770221	20770221	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	9	20770221	20770221	T	G	SNP	FOCAD	ENST00000338382	human	ensembl	74_37	+1	known	missense	c.890	p.V297G	0.928	NULL	pfam_DUF3028,pfam_DUF3730,superfamily_ARM-type_fold	-	no_errors	FOCAD	HGNC	ENSG00000188352	tier1	-	-	63	0	0.00	43	13	23.21
FOXR1	0	genome.wustl.edu	37	11	118850229	118850229	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	118850229	118850229	C	A	SNP	FOXR1	ENST00000531539	human	ensembl	74_37	+1	known	missense	c.391	p.P131T	0.996	NULL	NULL	-	no_errors	FOXR1	HGNC	ENSG00000176302	tier1	-	-	49	0	0.00	35	5	12.50
FOXRED2	0	genome.wustl.edu	37	22	36886088	36886088	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	22	36886088	36886088	A	-	DEL	FOXRED2	ENST00000216187	human	ensembl	74_37	-1	known	frame_shift_del	c.2022	p.Q675fs	0.000	NULL	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	-	no_errors	FOXRED2	HGNC	ENSG00000100350	tier1			134	0	0.00	98	24	19.67
FTH1P10	0	genome.wustl.edu	37	5	17354477	17354477	+	RNA	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	17354477	17354477	G	A	SNP	FTH1P10	ENST00000401830	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	FTH1P10	HGNC	ENSG00000223361	tier1	-	-	103	0	0.00	105	27	20.45
GAGE10	0	genome.wustl.edu	37	X	49161348	49161348	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	X	49161348	49161348	C	T	SNP	GAGE10	ENST00000407599	human	ensembl	74_37	+1	known	nonsense	c.10	p.R4*	0.000	pfam_GAGE	pfam_GAGE	-	no_errors	GAGE10	HGNC	ENSG00000215274	tier1	-	-	251	0	0.00	160	60	27.27
GALNT9	0	genome.wustl.edu	37	12	132811455	132811455	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	12	132811455	132811455	G	A	SNP	GALNT9	ENST00000535228	human	ensembl	74_37	-1	known	missense	c.233	p.T78M	0.001	NULL	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT9	HGNC	ENSG00000182870	tier1	-	-	72	0	0.00	24	29	54.72
GLTSCR1	0	genome.wustl.edu	37	19	48197738	48197738	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	48197738	48197738	A	C	SNP	GLTSCR1	ENST00000396720	human	ensembl	74_37	+1	known	missense	c.2650	p.T884P	0.055	NULL	NULL	-	no_errors	GLTSCR1	HGNC	ENSG00000063169	tier1	-	-	50	0	0.00	35	6	14.63
GNAS	0	genome.wustl.edu	37	20	57429277	57429277	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	20	57429277	57429277	C	T	SNP	GNAS	ENST00000306120	human	ensembl	74_37	+1	putative	missense	c.767	p.T256M	1.000	NULL	NULL	-	no_errors	GNAS	HGNC	ENSG00000087460				17	0	0.00	14	6	30.00
GPN1	0	genome.wustl.edu	37	2	27861756	27861756	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	27861756	27861756	A	C	SNP	GPN1	ENST00000264718	human	ensembl	74_37	+1	known	missense	c.617	p.D206A	1.000	pfam_Uncharacterised_ATP-bd,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_Uncharacterised_ATP-bd,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	GPN1	HGNC	ENSG00000198522				39	0	0.00	30	7	18.92
GPR15	0	genome.wustl.edu	37	3	98251956	98251956	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	98251956	98251956	T	C	SNP	GPR15	ENST00000284311	human	ensembl	74_37	+1	known	missense	c.1079	p.L360P	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srg,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_ATII_rcpt	-	no_errors	GPR15	HGNC	ENSG00000154165				39	0	0.00	31	4	11.43
GRIN2C	0	genome.wustl.edu	37	17	72843625	72843625	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	72843625	72843625	G	A	SNP	GRIN2C	ENST00000293190	human	ensembl	74_37	-1	known	missense	c.1823	p.A608V	0.996	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,pfam_NMDAR2_C,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2C	HGNC	ENSG00000161509	tier1	-	-	98	0	0.00	71	70	49.30
GRM1	0	genome.wustl.edu	37	6	146351241	146351241	+	Silent	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	146351241	146351241	T	G	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	silent	c.588	p.T196	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822	tier1	-	-	30	0	0.00	45	9	16.67
GRN	0	genome.wustl.edu	37	17	42427872	42427872	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	42427872	42427872	C	T	SNP	GRN	ENST00000586782	human	ensembl	74_37	+1	known	missense	c.505	p.H169Y	0.000	NULL	pfam_Granulin,smart_Granulin	-	no_errors	GRN	HGNC	ENSG00000030582	tier1	-	-	44	0	0.00	27	22	44.90
HEG1	0	genome.wustl.edu	37	3	124739730	124739730	+	Silent	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	124739730	124739730	T	C	SNP	HEG1	ENST00000311127	human	ensembl	74_37	-1	known	silent	c.1158	p.R386	0.000	NULL	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	HEG1	HGNC	ENSG00000173706	tier1	-	-	52	0	0.00	37	12	24.49
HIST1H2AK	0	genome.wustl.edu	37	6	27805943	27805943	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	27805943	27805943	G	C	SNP	HIST1H2AK	ENST00000330180	human	ensembl	74_37	-1	known	missense	c.175	p.L59V	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AK	HGNC	ENSG00000184348	tier1	rs144042626	-	119	0	0.00	113	22	16.30
HIST1H3J	0	genome.wustl.edu	37	6	27858512	27858512	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	27858512	27858512	T	A	SNP	HIST1H3J	ENST00000359303	human	ensembl	74_37	-1	known	missense	c.59	p.Q20L	1.000	superfamily_Histone-fold,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST1H3J	HGNC	ENSG00000197153				70	0	0.00	55	4	6.78
HLA-DQB1-AS1	0	genome.wustl.edu	37	6	32628221	32628221	+	RNA	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	32628221	32628221	G	A	SNP	HLA-DQB1-AS1	ENST00000419852	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HLA-DQB1-AS1	HGNC	ENSG00000223534	tier1	rs9273491	-	9	0	0.00	5	4	44.44
HNRNPDL	0	genome.wustl.edu	37	4	83347753	83347753	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	4	83347753	83347753	T	G	SNP	HNRNPDL	ENST00000295470	human	ensembl	74_37	-1	known	missense	c.1055	p.N352T	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPDL	HGNC	ENSG00000152795				43	0	0.00	30	2	6.25
HSPA1B	0	genome.wustl.edu	37	6	31797421	31797421	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	31797421	31797421	C	G	SNP	HSPA1B	ENST00000375650	human	ensembl	74_37	+1	known	missense	c.1694	p.A565G	0.635	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA1B	HGNC	ENSG00000204388	tier1	-	-	71	0	0.00	48	6	11.11
HTR3E	0	genome.wustl.edu	37	3	183824434	183824434	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	183824434	183824434	T	G	SNP	HTR3E	ENST00000335304	human	ensembl	74_37	+1	known	missense	c.1369	p.F457V	0.369	superfamily_Neurotrans-gated_channel_TM	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Neur_channel	-	no_errors	HTR3E	HGNC	ENSG00000186038	tier1	-	-	79	0	0.00	90	7	7.22
HYDIN	0	genome.wustl.edu	37	16	70874051	70874051	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	70874051	70874051	A	G	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	missense	c.12959	p.F4320S	1.000	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	50	0	0.00	45	8	15.09
IGDCC3	0	genome.wustl.edu	37	15	65623958	65623958	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	15	65623958	65623958	G	A	SNP	IGDCC3	ENST00000327987	human	ensembl	74_37	-1	known	silent	c.1188	p.A396	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGDCC3	HGNC	ENSG00000174498	tier1	-	-	41	0	0.00	29	12	29.27
IGSF10	0	genome.wustl.edu	37	3	151164487	151164487	+	Silent	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	151164487	151164487	A	G	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	silent	c.3282	p.I1094	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580	tier1	-	-	58	0	0.00	59	7	10.61
IGSF9	0	genome.wustl.edu	37	1	159898628	159898628	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	159898628	159898628	G	A	SNP	IGSF9	ENST00000368094	human	ensembl	74_37	-1	known	silent	c.2550	p.D850	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF9	HGNC	ENSG00000085552				11	0	0.00	13	3	18.75
IKZF2	0	genome.wustl.edu	37	2	213872531	213872531	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	213872531	213872531	G	T	SNP	IKZF2	ENST00000434687	human	ensembl	74_37	-1	known	missense	c.1134	p.N378K	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF2	HGNC	ENSG00000030419	tier1	-	-	44	0	0.00	21	5	19.23
IMPG2	0	genome.wustl.edu	37	3	100976579	100976579	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	100976579	100976579	T	C	SNP	IMPG2	ENST00000193391	human	ensembl	74_37	-1	known	missense	c.947	p.E316G	0.988	pfam_SEA_dom,smart_SEA_dom	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	IMPG2	HGNC	ENSG00000081148	tier1	-	-	33	0	0.00	29	6	17.14
INPP5F	0	genome.wustl.edu	37	10	121569640	121569640	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	10	121569640	121569640	A	C	SNP	INPP5F	ENST00000361976	human	ensembl	74_37	+1	known	missense	c.1598	p.K533T	1.000	NULL	pfam_Syja_N,pfam_Inositol_phosphatase,pfscan_Syja_N	-	no_errors	INPP5F	HGNC	ENSG00000198825	tier1	-	-	25	0	0.00	16	6	27.27
INSC	0	genome.wustl.edu	37	11	15199878	15199878	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	15199878	15199878	A	G	SNP	INSC	ENST00000379554	human	ensembl	74_37	+1	known	missense	c.605	p.Q202R	0.999	superfamily_ARM-type_fold	superfamily_ARM-type_fold,smart_Armadillo	-	no_errors	INSC	HGNC	ENSG00000188487	tier1	-	-	96	0	0.00	85	10	10.53
JAKMIP2	0	genome.wustl.edu	37	5	147040585	147040585	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	147040585	147040585	G	A	SNP	JAKMIP2	ENST00000265272	human	ensembl	74_37	-1	known	missense	c.553	p.R185W	0.687	NULL	NULL	-	no_errors	JAKMIP2	HGNC	ENSG00000176049	tier1	-	-	55	0	0.00	45	7	13.46
JARID2	0	genome.wustl.edu	37	6	15496868	15496868	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	15496868	15496868	G	T	SNP	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	missense	c.1412	p.G471V	0.889	NULL	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083				44	0	0.00	26	2	7.14
KCNA3	0	genome.wustl.edu	37	1	111216094	111216094	+	Silent	SNP	A	A	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	111216094	111216094	A	T	SNP	KCNA3	ENST00000369769	human	ensembl	74_37	-1	known	silent	c.1338	p.G446	0.252	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.3,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA3	HGNC	ENSG00000177272	tier1	-	-	58	0	0.00	51	4	7.14
KIAA1407	0	genome.wustl.edu	37	3	113729737	113729737	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	113729737	113729737	T	G	SNP	KIAA1407	ENST00000295878	human	ensembl	74_37	-1	known	missense	c.1295	p.K432T	1.000	NULL	NULL	-	no_errors	KIAA1407	HGNC	ENSG00000163617	tier1	-	-	27	0	0.00	26	4	13.33
KIF18B	0	genome.wustl.edu	37	17	43012682	43012682	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	43012682	43012682	C	T	SNP	KIF18B	ENST00000339151	human	ensembl	74_37	-1	known	missense	c.416	p.R139H	0.202	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF18B	HGNC	ENSG00000186185	tier1	-	-	54	0	0.00	37	27	41.54
KIF2B	0	genome.wustl.edu	37	17	51901055	51901055	+	Silent	SNP	C	C	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	51901055	51901055	C	A	SNP	KIF2B	ENST00000268919	human	ensembl	74_37	+1	known	silent	c.661	p.R221	0.984	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2B	HGNC	ENSG00000141200	tier1	-	-	26	0	0.00	11	5	31.25
KIF7	0	genome.wustl.edu	37	15	90177098	90177098	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	15	90177098	90177098	T	G	SNP	KIF7	ENST00000394412	human	ensembl	74_37	-1	known	missense	c.2411	p.K804T	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF7	HGNC	ENSG00000166813				61	0	0.00	54	8	12.90
KRT37	0	genome.wustl.edu	37	17	39580586	39580586	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	39580586	39580586	G	A	SNP	KRT37	ENST00000225550	human	ensembl	74_37	-1	known	missense	c.190	p.R64C	0.010	NULL	pfam_IF,prints_Keratin_I	-	no_errors	KRT37	HGNC	ENSG00000108417	tier1	-	-	34	0	0.00	55	5	8.33
LAMA1	0	genome.wustl.edu	37	18	7079982	7079982	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	18	7079982	7079982	A	C	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.337	p.L113V	0.993	pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,pfscan_Laminin_N	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	38	0	0.00	31	3	8.82
LASP1	0	genome.wustl.edu	37	17	37074945	37074945	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	37074945	37074945	C	T	SNP	LASP1	ENST00000318008	human	ensembl	74_37	+1	known	nonsense	c.700	p.Q234*	1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	pfam_Nebulin_35r-motif,pfam_Znf_LIM,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Znf_LIM,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Znf_LIM,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	LASP1	HGNC	ENSG00000002834	tier1	-	-	73	0	0.00	66	9	12.00
LIMCH1	0	genome.wustl.edu	37	4	41699388	41699388	+	RNA	DEL	T	T	-			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	4	41699388	41699388	T	-	DEL	LIMCH1	ENST00000515785	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LIMCH1	HGNC	ENSG00000064042	tier1			8	0	0.00	6	3	33.33
LINC00283	0	genome.wustl.edu	37	13	103397262	103397262	+	RNA	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	13	103397262	103397262	C	T	SNP	LINC00283	ENST00000430111	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	LINC00283	HGNC	ENSG00000231633	tier1	-	-	109	0	0.00	97	22	18.33
LINC00987	0	genome.wustl.edu	37	12	9393917	9393917	+	RNA	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	12	9393917	9393917	T	G	SNP	LINC00987	ENST00000427111	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	LINC00987	HGNC	ENSG00000237248	tier1	-	-	32	0	0.00	38	6	13.64
LOC101929271	0	genome.wustl.edu	37	4	100207959	100207959	+	RNA	SNP	A	A	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	4	100207959	100207959	A	T	SNP	LOC101929271	ENST00000500358	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-696N14.1	Clone_based_vega_gene	ENSG00000246090	tier1	-	-	57	0	0.00	58	10	14.71
LOC101929735	0	genome.wustl.edu	37	14	22887365	22887365	+	RNA	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	14	22887365	22887365	T	G	SNP	LOC101929735	ENST00000537850	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AE000661.37	Clone_based_vega_gene	ENSG00000251002	tier1	-	-	66	0	0.00	43	11	20.37
LOC407835	0	genome.wustl.edu	37	7	128767493	128767493	+	RNA	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	128767493	128767493	G	A	SNP	LOC407835	ENST00000471777	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.170	-	-	-	no_errors	RP11-286H14.4	Clone_based_vega_gene	ENSG00000230626	tier1	-	-	79	0	0.00	48	14	22.58
LRP2	0	genome.wustl.edu	37	2	170062083	170062083	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	170062083	170062083	A	C	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	missense	c.7621	p.F2541V	1.000	pfam_LDLR_classB_rpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479	tier1	-	-	69	0	0.00	61	7	10.29
LYST	0	genome.wustl.edu	37	1	235827307	235827307	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	235827307	235827307	G	A	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	silent	c.11244	p.P3748	0.998	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669	tier1	-	-	31	0	0.00	19	19	50.00
MAP3K19	0	genome.wustl.edu	37	2	135743638	135743638	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	135743638	135743638	T	G	SNP	MAP3K19	ENST00000375845	human	ensembl	74_37	-1	known	missense	c.2804	p.K935T	0.040	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K19	HGNC	ENSG00000176601				65	0	0.00	39	3	6.98
MARCH4	0	genome.wustl.edu	37	2	217234868	217234868	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	217234868	217234868	T	G	SNP	MARCH4	ENST00000273067	human	ensembl	74_37	-1	known	missense	c.116	p.K39T	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH4	HGNC	ENSG00000144583	tier1	-	-	48	0	0.00	36	6	14.29
MATN4	0	genome.wustl.edu	37	20	43927056	43927056	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	20	43927056	43927056	G	T	SNP	MATN4	ENST00000372754	human	ensembl	74_37	-1	known	missense	c.1303	p.R435S	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_EGF-like_Ca-bd_dom,pfam_Matrilin_coiled-coil_trimer,smart_VWF_A,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_VWF_A	-	no_errors	MATN4	HGNC	ENSG00000124159	tier1	-	-	53	0	0.00	39	21	35.00
MCC	0	genome.wustl.edu	37	5	112824048	112824049	+	In_Frame_Ins	INS	-	-	GCC			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	112824048	112824049	0	GCC	INS	MCC	ENST00000408903	human	ensembl	74_37	-1	putative	in_frame_ins	c.64_63	p.21in_frame_insG	0.854:0.894	NULL	pfam_USH1C-bd_PDZ_domain,superfamily_tRNA-bd_arm,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MCC	HGNC	ENSG00000171444				8	0	0.00	13	5	27.78
MCFD2	0	genome.wustl.edu	37	2	47136240	47136240	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	47136240	47136240	G	A	SNP	MCFD2	ENST00000319466	human	ensembl	74_37	-1	known	missense	c.71	p.A24V	0.003	NULL	pfscan_EF_hand_dom	-	no_errors	MCFD2	HGNC	ENSG00000180398	tier1	-	-	55	0	0.00	42	10	19.23
MCTP2	0	genome.wustl.edu	37	15	94888377	94888377	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	15	94888377	94888377	G	T	SNP	MCTP2	ENST00000357742	human	ensembl	74_37	+1	known	missense	c.989	p.R330L	0.589	NULL	pfam_C2_dom,pfam_PRibTrfase_C,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	MCTP2	HGNC	ENSG00000140563				39	0	0.00	47	3	6.00
MDGA1	0	genome.wustl.edu	37	6	37626132	37626132	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	37626132	37626132	C	T	SNP	MDGA1	ENST00000297153	human	ensembl	74_37	-1	known	missense	c.271	p.E91K	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA1	HGNC	ENSG00000112139	tier1	-	-	110	0	0.00	93	14	13.08
MED12L	0	genome.wustl.edu	37	3	151107893	151107893	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	151107893	151107893	T	G	SNP	MED12L	ENST00000474524	human	ensembl	74_37	+1	known	missense	c.5473	p.F1825V	1.000	pfam_Mediator_Med12_catenin-bd	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12,pfam_Mediator_Med12_catenin-bd	-	no_errors	MED12L	HGNC	ENSG00000144893	tier1	-	-	37	0	0.00	43	6	12.24
MED25	0	genome.wustl.edu	37	19	50338429	50338429	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	50338429	50338429	C	T	SNP	MED25	ENST00000312865	human	ensembl	74_37	+1	known	nonsense	c.1669	p.R557*	0.999	NULL	pfam_Mediator_Med25_VWA,pfam_Mediator_Med25,pfam_Mediator_Med25_SD1,pfam_Mediator_Med25_NR-box	-	no_errors	MED25	HGNC	ENSG00000104973	tier1	-	-	55	0	0.00	45	23	33.82
MGAT4C	0	genome.wustl.edu	37	12	86373533	86373533	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	12	86373533	86373533	T	C	SNP	MGAT4C	ENST00000393205	human	ensembl	74_37	-1	known	missense	c.1058	p.K353R	1.000	pfam_Glyco_transf_54	pfam_Glyco_transf_54,superfamily_LSM_dom	-	no_errors	MGAT4C	HGNC	ENSG00000182050				14	0	0.00	8	3	27.27
MIR335	0	genome.wustl.edu	37	7	130138218	130138218	+	RNA	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	130138218	130138218	A	C	SNP	MIR335	ENST00000604666	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	hsa-mir-335	miRBase	ENSG00000270823	tier1	-	-	192	0	0.00	91	29	24.17
MMP2	0	genome.wustl.edu	37	16	55523591	55523591	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	55523591	55523591	A	T	SNP	MMP2	ENST00000219070	human	ensembl	74_37	+1	known	missense	c.1035	p.E345D	0.995	pfam_Pept_M10_metallopeptidase,superfamily_Kringle-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP2	HGNC	ENSG00000087245	tier1	-	-	97	0	0.00	84	13	13.27
MSH6	0	genome.wustl.edu	37	2	48018227	48018227	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	48018227	48018227	G	T	SNP	MSH6	ENST00000234420	human	ensembl	74_37	+1	known	missense	c.422	p.G141V	1.000	pfam_PWWP_dom,smart_PWWP_dom,pirsf_DNA_mismatch_repair_Msh6,pfscan_PWWP_dom	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_core,pfam_PWWP_dom,pfam_DNA_mismatch_repair_MutS_clamp,pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_PWWP_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C,pirsf_DNA_mismatch_repair_Msh6,pfscan_PWWP_dom	-	no_errors	MSH6	HGNC	ENSG00000116062				36	0	0.00	35	2	5.41
MTHFD1L	0	genome.wustl.edu	37	6	151265637	151265637	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	151265637	151265637	A	G	SNP	MTHFD1L	ENST00000367321	human	ensembl	74_37	+1	known	missense	c.1456	p.T486A	1.000	pfam_Formate_THF_ligase,superfamily_P-loop_NTPase	pfam_Formate_THF_ligase,pfam_THF_DH/CycHdrlase_NAD-bd_dom,pfam_THF_DH/CycHdrlase_cat_dom,superfamily_P-loop_NTPase,prints_THF_DH/CycHdrlase	-	no_errors	MTHFD1L	HGNC	ENSG00000120254				39	0	0.00	32	4	11.11
MUC21	0	genome.wustl.edu	37	6	30955326	30955326	+	Silent	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	30955326	30955326	T	G	SNP	MUC21	ENST00000376296	human	ensembl	74_37	+1	known	silent	c.1374	p.T458	0.000	NULL	NULL	-	no_errors	MUC21	HGNC	ENSG00000204544	tier1	-	-	140	0	0.00	119	9	7.03
MYH7	0	genome.wustl.edu	37	14	23895180	23895180	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	14	23895180	23895180	G	A	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	missense	c.2155	p.R719W	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054	tier1	rs121913637	-	150	0	0.00	99	15	13.16
NALCN	0	genome.wustl.edu	37	13	101910908	101910908	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	13	101910908	101910908	G	A	SNP	NALCN	ENST00000251127	human	ensembl	74_37	-1	known	silent	c.1152	p.S384	0.000	NULL	pfam_Ion_trans_dom	-	no_errors	NALCN	HGNC	ENSG00000102452	tier1	-	-	36	0	0.00	12	4	25.00
NAV2	0	genome.wustl.edu	37	11	19970543	19970543	+	Silent	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	19970543	19970543	A	G	SNP	NAV2	ENST00000396087	human	ensembl	74_37	+1	known	silent	c.2631	p.E877	0.752	NULL	pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833	tier1	-	-	26	0	0.00	26	8	23.53
NDC80	0	genome.wustl.edu	37	18	2579004	2579004	+	Silent	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	18	2579004	2579004	A	G	SNP	NDC80	ENST00000261597	human	ensembl	74_37	+1	known	silent	c.555	p.L185	1.000	pfam_Kinetochore_Ndc80	pfam_Kinetochore_Ndc80,superfamily_t-SNARE	-	no_errors	NDC80	HGNC	ENSG00000080986	tier1	-	-	69	0	0.00	74	16	17.78
NDUFAF5	0	genome.wustl.edu	37	20	13767912	13767912	+	RNA	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	20	13767912	13767912	A	C	SNP	NDUFAF5	ENST00000469177	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NDUFAF5	HGNC	ENSG00000101247	tier1	-	-	30	0	0.00	33	5	13.16
NELL1	0	genome.wustl.edu	37	11	21306075	21306075	+	RNA	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	21306075	21306075	T	G	SNP	NELL1	ENST00000529218	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.975	-	-	-	no_errors	NELL1	HGNC	ENSG00000165973	tier1	-	-	28	0	0.00	37	6	13.95
NFKB1	0	genome.wustl.edu	37	4	103514703	103514703	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	4	103514703	103514703	G	A	SNP	NFKB1	ENST00000226574	human	ensembl	74_37	+1	known	silent	c.1188	p.G396	0.007	NULL	pfam_RHD,pfam_Ankyrin_rpt,pfam_Death_domain,superfamily_p53-like_TF_DNA-bd,superfamily_Ankyrin_rpt-contain_dom,superfamily_Ig_E-set,superfamily_DEATH-like_dom,smart_IPT,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_RHD,prints_NF_Rel_Dor,prints_Ankyrin_rpt	-	no_errors	NFKB1	HGNC	ENSG00000109320	tier1	-	-	55	0	0.00	30	23	43.40
NGFR	0	genome.wustl.edu	37	17	47583763	47583763	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	47583763	47583763	A	T	SNP	NGFR	ENST00000172229	human	ensembl	74_37	+1	known	missense	c.311	p.D104V	1.000	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg	pfam_TNFR/NGFR_Cys_rich_reg,pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,pfscan_Death_domain,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_16	-	no_errors	NGFR	HGNC	ENSG00000064300	tier1	-	-	47	0	0.00	32	4	11.11
NKPD1	0	genome.wustl.edu	37	19	45655825	45655825	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	45655825	45655825	G	A	SNP	NKPD1	ENST00000317951	human	ensembl	74_37	-1	known	missense	c.1870	p.R624C	1.000	pfam_KAP_NTPase	pfam_KAP_NTPase	-	no_errors	NKPD1	HGNC	ENSG00000179846	tier1	-	-	60	0	0.00	25	11	30.56
NLGN4X	0	genome.wustl.edu	37	X	5821829	5821829	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	X	5821829	5821829	G	A	SNP	NLGN4X	ENST00000381093	human	ensembl	74_37	-1	known	missense	c.950	p.T317I	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN4X	HGNC	ENSG00000146938	tier1	-	-	60	0	0.00	23	24	51.06
NLRP11	0	genome.wustl.edu	37	19	56329312	56329312	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	56329312	56329312	G	A	SNP	NLRP11	ENST00000443188	human	ensembl	74_37	-1	known	missense	c.229	p.R77C	0.000	pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN	pfam_DAPIN,superfamily_DEATH-like_dom,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP11	HGNC	ENSG00000179873	tier1	-	-	46	0	0.00	25	14	35.90
NOTCH1	0	genome.wustl.edu	37	9	139412339	139412339	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	9	139412339	139412339	A	G	SNP	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	missense	c.1306	p.F436L	1.000	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_Notch,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400				51	0	0.00	45	3	6.25
NPIPB15	0	genome.wustl.edu	37	16	74423763	74423763	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	74423763	74423763	G	A	SNP	NPIPB15	ENST00000429990	human	ensembl	74_37	+1	known	missense	c.586	p.E196K	0.010	NULL	NULL	-	no_errors	NPIPB15	HGNC	ENSG00000196436	tier1	-	-	104	0	0.00	91	24	20.87
NPTX2	0	genome.wustl.edu	37	7	98254301	98254301	+	Silent	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	98254301	98254301	C	T	SNP	NPTX2	ENST00000265634	human	ensembl	74_37	+1	known	silent	c.711	p.Y237	0.535	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	NPTX2	HGNC	ENSG00000106236	tier1	-	-	100	0	0.00	185	23	11.06
NUP210	0	genome.wustl.edu	37	3	13429807	13429807	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	13429807	13429807	T	C	SNP	NUP210	ENST00000254508	human	ensembl	74_37	-1	known	missense	c.680	p.Y227C	1.000	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182	tier1	-	-	23	0	0.00	19	7	26.92
OCA2	0	genome.wustl.edu	37	15	28200304	28200305	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	15	28200304	28200305	-	T	INS	OCA2	ENST00000354638	human	ensembl	74_37	-1	known	frame_shift_ins	c.1842_1841	p.H615fs	1.000:1.000	pfam_Cit_transptr-like_dom,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	pfam_Cit_transptr-like_dom,pfam_Na/sul_symport,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	-	no_errors	OCA2	HGNC	ENSG00000104044	tier1			47	0	0.00	38	6	13.64
OLFM3	0	genome.wustl.edu	37	1	102269726	102269726	+	RNA	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	102269726	102269726	C	T	SNP	OLFM3	ENST00000462354	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	OLFM3	HGNC	ENSG00000118733	tier1	-	-	42	0	0.00	14	11	44.00
OR1K1	0	genome.wustl.edu	37	9	125562456	125562456	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	9	125562456	125562456	A	C	SNP	OR1K1	ENST00000277309	human	ensembl	74_37	+1	known	missense	c.55	p.T19P	0.090	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1K1	HGNC	ENSG00000165204	tier1	-	-	32	0	0.00	31	5	13.89
OR4D9	0	genome.wustl.edu	37	11	59282910	59282910	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	59282910	59282910	C	A	SNP	OR4D9	ENST00000329328	human	ensembl	74_37	+1	known	missense	c.525	p.D175E	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4D9	HGNC	ENSG00000172742	tier1	-	-	79	0	0.00	81	40	33.06
OR4N4	0	genome.wustl.edu	37	15	22382597	22382597	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	15	22382597	22382597	A	C	SNP	OR4N4	ENST00000328795	human	ensembl	74_37	+1	known	missense	c.125	p.N42T	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4N4	HGNC	ENSG00000183706	tier1	-	-	154	0	0.00	160	22	12.09
OR5B12	0	genome.wustl.edu	37	11	58207475	58207475	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	58207475	58207475	G	A	SNP	OR5B12	ENST00000302572	human	ensembl	74_37	-1	known	silent	c.150	p.D50	0.927	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR5B12	HGNC	ENSG00000172362	tier1	-	-	51	0	0.00	48	11	18.64
OR5H15	0	genome.wustl.edu	37	3	97887762	97887762	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	97887762	97887762	A	-	DEL	OR5H15	ENST00000356526	human	ensembl	74_37	+1	known	frame_shift_del	c.219	p.S74fs	0.009	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5H15	HGNC	ENSG00000233412	tier1			95	0	0.00	115	13	10.16
PACSIN1	0	genome.wustl.edu	37	6	34494067	34494067	+	RNA	SNP	C	C	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	34494067	34494067	C	A	SNP	PACSIN1	ENST00000486120	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PACSIN1	HGNC	ENSG00000124507	tier1	-	-	56	0	0.00	50	7	12.28
PARM1	0	genome.wustl.edu	37	4	75938258	75938258	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	4	75938258	75938258	A	G	SNP	PARM1	ENST00000307428	human	ensembl	74_37	+1	known	missense	c.667	p.T223A	0.000	NULL	NULL	-	no_errors	PARM1	HGNC	ENSG00000169116	tier1	-	-	30	0	0.00	27	19	41.30
PARP4	0	genome.wustl.edu	37	13	25016815	25016815	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	13	25016815	25016815	T	A	SNP	PARP4	ENST00000381989	human	ensembl	74_37	-1	known	missense	c.3456	p.K1152N	0.998	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_VIT,pfam_VWF_A,pfam_BRCT_dom,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_BRCT_dom,smart_BRCT_dom,smart_VIT,smart_VWF_A,pfscan_BRCT_dom,pfscan_VWF_A,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP4	HGNC	ENSG00000102699				58	0	0.00	47	8	14.55
PATZ1	0	genome.wustl.edu	37	22	31723129	31723131	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	22	31723129	31723131	CTT	-	DEL	PATZ1	ENST00000266269	human	ensembl	74_37	-1	known	in_frame_del	c.1812_1810	p.K604in_frame_del	1.000:1.000:1.000	NULL	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	PATZ1	HGNC	ENSG00000100105	tier1			33	0	0.00	23	4	14.81
PCDHA10	0	genome.wustl.edu	37	5	140236755	140236755	+	Silent	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	140236755	140236755	T	C	SNP	PCDHA10	ENST00000307360	human	ensembl	74_37	+1	known	silent	c.1122	p.S374	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA10	HGNC	ENSG00000250120	tier1	-	-	107	0	0.00	79	9	10.23
PCDHB12	0	genome.wustl.edu	37	5	140589229	140589229	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	140589229	140589229	G	A	SNP	PCDHB12	ENST00000239450	human	ensembl	74_37	+1	known	silent	c.750	p.K250	0.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB12	HGNC	ENSG00000120328	tier1	-	-	46	0	0.00	58	6	9.23
PCDHB6	0	genome.wustl.edu	37	5	140530084	140530084	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	140530084	140530084	T	G	SNP	PCDHB6	ENST00000231136	human	ensembl	74_37	+1	known	missense	c.246	p.D82E	0.102	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211				43	0	0.00	51	4	7.27
PCLO	0	genome.wustl.edu	37	7	82538208	82538208	+	Silent	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	82538208	82538208	A	G	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	silent	c.13422	p.S4474	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	37	0	0.00	38	6	13.64
PCLO	0	genome.wustl.edu	37	7	82595624	82595624	+	Silent	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	82595624	82595624	T	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	silent	c.3480	p.Q1160	0.818	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	114	0	0.00	116	11	8.66
PCLO	0	genome.wustl.edu	37	7	82791691	82791691	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	82791691	82791691	G	A	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.218	p.P73L	0.998	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	108	0	0.00	96	34	26.15
PCSK2	0	genome.wustl.edu	37	20	17389929	17389929	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	20	17389929	17389929	T	G	SNP	PCSK2	ENST00000262545	human	ensembl	74_37	+1	known	missense	c.565	p.F189V	1.000	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK2	HGNC	ENSG00000125851	tier1	-	-	90	0	0.00	89	19	17.59
PDE4DIP	0	genome.wustl.edu	37	1	144892482	144892482	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	144892482	144892482	G	A	SNP	PDE4DIP	ENST00000369351	human	ensembl	74_37	-1	known	silent	c.2923	p.L975	0.114	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	tier1	-	-	112	0	0.00	94	18	16.07
PDGFRB	0	genome.wustl.edu	37	5	149499620	149499620	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	149499620	149499620	C	T	SNP	PDGFRB	ENST00000261799	human	ensembl	74_37	-1	known	missense	c.2653	p.D885N	1.000	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	PDGFRB	HGNC	ENSG00000113721	tier1	-	-	54	0	0.00	31	8	20.51
PGM2L1	0	genome.wustl.edu	37	11	74056564	74056564	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	74056564	74056564	A	G	SNP	PGM2L1	ENST00000298198	human	ensembl	74_37	-1	known	missense	c.1168	p.S390P	1.000	pfam_A-D-PHexomutase_a/b/a-III,superfamily_A-D-PHexomutase_a/b/a-I/II/III	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-II,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_C,superfamily_A-D-PHexomutase_a/b/a-I/II/III	-	no_errors	PGM2L1	HGNC	ENSG00000165434	tier1	-	-	37	0	0.00	30	7	18.92
PHACTR2	0	genome.wustl.edu	37	6	144033198	144033198	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	144033198	144033198	C	T	SNP	PHACTR2	ENST00000440869	human	ensembl	74_37	+1	known	missense	c.92	p.T31I	0.006	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR2	HGNC	ENSG00000112419				43	0	0.00	30	3	9.09
PHYH	0	genome.wustl.edu	37	10	13337564	13337564	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	10	13337564	13337564	T	G	SNP	PHYH	ENST00000263038	human	ensembl	74_37	-1	known	missense	c.177	p.K59N	0.997	NULL	pfam_Phytyl_CoA_dOase	-	no_errors	PHYH	HGNC	ENSG00000107537	tier1	-	-	59	0	0.00	38	6	13.64
PI15	0	genome.wustl.edu	37	8	75761430	75761430	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	8	75761430	75761430	G	A	SNP	PI15	ENST00000260113	human	ensembl	74_37	+1	known	missense	c.719	p.C240Y	1.000	NULL	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	-	no_errors	PI15	HGNC	ENSG00000137558				56	0	0.00	51	3	5.56
PILRB	0	genome.wustl.edu	37	7	99957139	99957139	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	99957139	99957139	C	T	SNP	PILRB	ENST00000448382	human	ensembl	74_37	+1	known	missense	c.791	p.P264L	0.114	NULL	NULL	-	no_errors	PILRB	HGNC	ENSG00000121716				60	0	0.00	204	17	7.69
PKD1	0	genome.wustl.edu	37	16	2158502	2158502	+	Silent	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	2158502	2158502	C	T	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	silent	c.6666	p.A2222	0.303	pfam_PKD/REJ-like,pfscan_REJ-like,tigrfam_Polycystin_cat	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710	tier1	-	-	60	0	0.00	68	6	8.11
PLCL1	0	genome.wustl.edu	37	2	198953695	198953695	+	Silent	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	198953695	198953695	C	T	SNP	PLCL1	ENST00000428675	human	ensembl	74_37	+1	known	silent	c.2829	p.V943	0.887	NULL	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCL1	HGNC	ENSG00000115896	tier1	-	-	59	0	0.00	36	16	30.77
PLEC	0	genome.wustl.edu	37	8	144991310	144991310	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	8	144991310	144991310	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	missense	c.13090	p.L4364F	0.997	NULL	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209	tier1	-	-	31	0	0.00	28	8	22.22
PLEKHH2	0	genome.wustl.edu	37	2	43931168	43931168	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	43931168	43931168	G	A	SNP	PLEKHH2	ENST00000282406	human	ensembl	74_37	+1	known	missense	c.1699	p.A567T	0.996	NULL	pfam_Pleckstrin_homology,pfam_MyTH4_dom,pfam_FERM_central,superfamily_FERM_central,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEKHH2	HGNC	ENSG00000152527				41	0	0.00	56	4	6.67
PLEKHM1	0	genome.wustl.edu	37	17	43530941	43530941	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	43530941	43530941	G	A	SNP	PLEKHM1	ENST00000430334	human	ensembl	74_37	-1	known	silent	c.2277	p.A759	0.032	smart_Pleckstrin_homology	pfam_Run,superfamily_Znf_FYVE_PHD,smart_Run,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Pleckstrin_homology,pfscan_Run,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	PLEKHM1	HGNC	ENSG00000225190	tier1	-	-	32	0	0.00	32	26	44.83
PLGRKT	0	genome.wustl.edu	37	9	5431901	5431901	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	9	5431901	5431901	A	G	SNP	PLGRKT	ENST00000223864	human	ensembl	74_37	-1	known	missense	c.77	p.L26P	1.000	pfam_DUF2368	pfam_DUF2368	-	no_errors	PLGRKT	HGNC	ENSG00000107020				14	0	0.00	33	3	8.33
PLOD2	0	genome.wustl.edu	37	3	145790411	145790411	+	Silent	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	145790411	145790411	T	C	SNP	PLOD2	ENST00000282903	human	ensembl	74_37	-1	known	silent	c.1785	p.K595	0.994	smart_Pro_4_hyd_alph	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	PLOD2	HGNC	ENSG00000152952	tier1	-	-	45	0	0.00	37	8	17.78
PLXNA2	0	genome.wustl.edu	37	1	208200097	208200097	+	RNA	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	208200097	208200097	T	C	SNP	PLXNA2	ENST00000483048	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PLXNA2	HGNC	ENSG00000076356	tier1	-	-	50	0	0.00	22	28	56.00
POM121L9P	0	genome.wustl.edu	37	22	24648561	24648561	+	RNA	SNP	C	C	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	22	24648561	24648561	C	A	SNP	POM121L9P	ENST00000414583	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.024	-	-	-	no_errors	POM121L9P	HGNC	ENSG00000128262	tier1	-	-	68	0	0.00	28	14	33.33
POTEC	0	genome.wustl.edu	37	18	14522271	14522271	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	18	14522271	14522271	T	G	SNP	POTEC	ENST00000358970	human	ensembl	74_37	-1	known	missense	c.1391	p.E464A	0.003	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEC	HGNC	ENSG00000183206	tier1	-	-	113	0	0.00	92	19	17.12
POTEH-AS1	0	genome.wustl.edu	37	22	16277923	16277923	+	RNA	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	22	16277923	16277923	T	G	SNP	POTEH-AS1	ENST00000422014	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	POTEH-AS1	HGNC	ENSG00000236666	tier1	rs199574869	-	19	0	0.00	8	6	42.86
PRKRIP1	0	genome.wustl.edu	37	7	102066961	102066961	+	RNA	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	102066961	102066961	T	G	SNP	PRKRIP1	ENST00000482465	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.067	-	-	-	no_errors	PRKRIP1	HGNC	ENSG00000128563	tier1	-	-	41	0	0.00	181	15	7.65
PRPF38B	0	genome.wustl.edu	37	1	109241944	109241944	+	Silent	SNP	C	C	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	109241944	109241944	C	A	SNP	PRPF38B	ENST00000370025	human	ensembl	74_37	+1	known	silent	c.943	p.R315	1.000	NULL	pfam_PRP38	-	no_errors	PRPF38B	HGNC	ENSG00000134186				22	0	0.00	31	2	6.06
PRUNE2	0	genome.wustl.edu	37	9	79318714	79318714	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	9	79318714	79318714	T	G	SNP	PRUNE2	ENST00000428286	human	ensembl	74_37	-1	known	missense	c.6738	p.E2246D	0.053	NULL	pfam_Bcl2-/adenovirus-E1B,pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	-	no_errors	PRUNE2	HGNC	ENSG00000106772	tier1	-	-	51	0	0.00	54	4	6.90
PTPRVP	0	genome.wustl.edu	37	1	202156171	202156171	+	RNA	SNP	G	G	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	202156171	202156171	G	C	SNP	PTPRVP	ENST00000482597	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PTPRVP	HGNC	ENSG00000243323	tier1	-	-	38	0	0.00	37	4	9.76
PTPRVP	0	genome.wustl.edu	37	1	202156172	202156172	+	RNA	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	202156172	202156172	A	C	SNP	PTPRVP	ENST00000482597	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	PTPRVP	HGNC	ENSG00000243323	tier1	-	-	38	0	0.00	37	4	9.52
RAB34	0	genome.wustl.edu	37	17	27041593	27041593	+	Silent	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	27041593	27041593	A	C	SNP	RAB34	ENST00000453384	human	ensembl	74_37	-1	known	silent	c.804	p.A268	0.013	smart_Small_GTPase_Ras	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB34	HGNC	ENSG00000109113	tier1	-	-	42	0	0.00	46	5	9.80
RAD54B	0	genome.wustl.edu	37	8	95384386	95384386	+	RNA	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	8	95384386	95384386	A	C	SNP	RAD54B	ENST00000519348	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	RAD54B	HGNC	ENSG00000197275	tier1	-	-	58	0	0.00	68	9	11.69
RAG1	0	genome.wustl.edu	37	11	36597527	36597527	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	36597527	36597527	G	A	SNP	RAG1	ENST00000299440	human	ensembl	74_37	+1	known	silent	c.2673	p.K891	1.000	NULL	pfam_Znf_VDJ_recomb-activ_1,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RAG1	HGNC	ENSG00000166349	tier1	-	-	23	0	0.00	17	6	26.09
RANBP17	0	genome.wustl.edu	37	5	170610191	170610191	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	170610191	170610191	T	C	SNP	RANBP17	ENST00000523189	human	ensembl	74_37	+1	known	missense	c.1886	p.L629P	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	RANBP17	HGNC	ENSG00000204764	tier1	-	-	60	0	0.00	48	12	20.00
RAP2C	0	genome.wustl.edu	37	X	131348424	131348424	+	Silent	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	X	131348424	131348424	T	C	SNP	RAP2C	ENST00000342983	human	ensembl	74_37	-1	known	silent	c.324	p.K108	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAP2C	HGNC	ENSG00000123728	tier1	-	-	35	0	0.00	33	10	23.26
RASA1	0	genome.wustl.edu	37	5	86645099	86645099	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	86645099	86645099	C	T	SNP	RASA1	ENST00000274376	human	ensembl	74_37	+1	known	missense	c.1171	p.R391W	1.000	pfam_SH2,smart_SH2,pfscan_SH2	pfam_SH2,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_SH3_domain,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_SH2,smart_SH3_domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_RasGAP,prints_SH2	-	no_errors	RASA1	HGNC	ENSG00000145715	tier1	-	-	47	0	0.00	44	10	18.52
RBM27	0	genome.wustl.edu	37	5	145647319	145647320	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	145647319	145647320	-	A	INS	RBM27	ENST00000265271	human	ensembl	74_37	+1	known	frame_shift_ins	c.2439_2440	p.Q816fs	1.000:1.000	NULL	pfam_PWI_dom,pfam_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM27	HGNC	ENSG00000091009	tier1			47	0	0.00	37	8	17.78
RFXANK	0	genome.wustl.edu	37	19	19304837	19304837	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	19304837	19304837	G	A	SNP	RFXANK	ENST00000303088	human	ensembl	74_37	+1	known	missense	c.82	p.G28R	0.000	pirsf_DNA-bd_RFXANK	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_DNA-bd_RFXANK,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	RFXANK	HGNC	ENSG00000064490	tier1	-	-	43	0	0.00	43	18	29.51
RHBDF1	0	genome.wustl.edu	37	16	109078	109078	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	109078	109078	C	T	SNP	RHBDF1	ENST00000262316	human	ensembl	74_37	-1	known	missense	c.2042	p.R681Q	1.000	pfam_Peptidase_S54_rhomboid_dom	pfam_Rhomboid_SP,pfam_Peptidase_S54_rhomboid_dom	-	no_errors	RHBDF1	HGNC	ENSG00000007384	tier1	-	-	99	0	0.00	67	22	24.72
RIMS2	0	genome.wustl.edu	37	8	105080825	105080825	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	8	105080825	105080825	A	C	SNP	RIMS2	ENST00000436393	human	ensembl	74_37	+1	novel	missense	c.2706	p.Q902H	1.000	NULL	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	RIMS2	HGNC	ENSG00000176406	tier1	-	-	31	0	0.00	27	4	12.90
RNF213	0	genome.wustl.edu	37	17	78346353	78346353	+	Silent	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	78346353	78346353	C	T	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	silent	c.12570	p.S4190	0.000	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821	tier1	-	-	66	0	0.00	72	9	11.11
RNF41	0	genome.wustl.edu	37	12	56607827	56607827	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	12	56607827	56607827	C	T	SNP	RNF41	ENST00000345093	human	ensembl	74_37	-1	known	missense	c.5	p.G2E	1.000	NULL	pfam_USP8_interacting,pfam_Znf_C3HC4_RING-type,pfam_Ubox_domain,superfamily_TRAF-like,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_SIAH	-	no_errors	RNF41	HGNC	ENSG00000181852	tier1	-	-	30	0	0.00	26	5	16.13
RNF43	0	genome.wustl.edu	37	17	56439977	56439977	+	Silent	SNP	C	C	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	56439977	56439977	C	A	SNP	RNF43	ENST00000407977	human	ensembl	74_37	-1	known	silent	c.615	p.V205	1.000	NULL	pfam_Znf_C3HC4_RING-type,superfamily_PAS,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF43	HGNC	ENSG00000108375	tier1	-	-	80	0	0.00	63	10	13.70
RPS6KL1	0	genome.wustl.edu	37	14	75376518	75376518	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	14	75376518	75376518	G	T	SNP	RPS6KL1	ENST00000358328	human	ensembl	74_37	-1	known	missense	c.998	p.A333D	0.001	pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_MIT,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_MIT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	RPS6KL1	HGNC	ENSG00000198208	tier1	-	-	109	0	0.00	83	23	21.70
SAE1	0	genome.wustl.edu	37	19	47653535	47653535	+	Nonsense_Mutation	SNP	T	T	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	47653535	47653535	T	A	SNP	SAE1	ENST00000270225	human	ensembl	74_37	+1	known	nonsense	c.287	p.L96*	1.000	pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB	pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like	-	no_errors	SAE1	HGNC	ENSG00000142230	tier1	-	-	85	0	0.00	58	11	15.94
SCG2	0	genome.wustl.edu	37	2	224463745	224463745	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	224463745	224463745	C	T	SNP	SCG2	ENST00000305409	human	ensembl	74_37	-1	known	missense	c.256	p.V86I	0.251	pfam_Granin	pfam_Granin	-	no_errors	SCG2	HGNC	ENSG00000171951	tier1	-	-	70	0	0.00	58	13	18.31
SCN8A	0	genome.wustl.edu	37	12	52162882	52162882	+	Silent	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	12	52162882	52162882	C	T	SNP	SCN8A	ENST00000354534	human	ensembl	74_37	+1	known	silent	c.3135	p.I1045	0.246	pfam_Na_trans_assoc	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,prints_Na_channel_a8su,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN8A	HGNC	ENSG00000196876	tier1	-	-	49	0	0.00	27	5	15.62
SEC16A	0	genome.wustl.edu	37	9	139342035	139342035	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	9	139342035	139342035	T	C	SNP	SEC16A	ENST00000313050	human	ensembl	74_37	-1	known	missense	c.6545	p.Y2182C	1.000	NULL	NULL	-	no_errors	SEC16A	HGNC	ENSG00000148396	tier1	-	-	55	0	0.00	56	16	21.92
SHB	0	genome.wustl.edu	37	9	37919868	37919868	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	9	37919868	37919868	C	T	SNP	SHB	ENST00000377707	human	ensembl	74_37	-1	known	missense	c.1480	p.G494R	1.000	pfscan_SH2	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	SHB	HGNC	ENSG00000107338	tier1	-	-	76	0	0.00	66	24	26.67
SHISA9	0	genome.wustl.edu	37	16	13329093	13329093	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	13329093	13329093	T	C	SNP	SHISA9	ENST00000558583	human	ensembl	74_37	+1	known	missense	c.1225	p.F409L	1.000	NULL	NULL	-	no_errors	SHISA9	HGNC	ENSG00000237515	tier1	-	-	72	0	0.00	76	7	8.43
SIGLEC6	0	genome.wustl.edu	37	19	52034756	52034756	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	52034756	52034756	G	A	SNP	SIGLEC6	ENST00000425629	human	ensembl	74_37	-1	known	missense	c.85	p.R29W	0.000	NULL	pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC6	HGNC	ENSG00000105492	tier1	-	-	55	0	0.00	44	6	12.00
SIX5	0	genome.wustl.edu	37	19	46269143	46269143	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	46269143	46269143	G	A	SNP	SIX5	ENST00000317578	human	ensembl	74_37	-1	known	silent	c.1836	p.H612	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	SIX5	HGNC	ENSG00000177045	tier1	-	-	108	0	0.00	88	44	33.08
SLC10A3	0	genome.wustl.edu	37	X	153716993	153716993	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	X	153716993	153716993	G	T	SNP	SLC10A3	ENST00000263512	human	ensembl	74_37	-1	known	missense	c.287	p.A96D	0.629	NULL	pfam_BilAc/Na_symport,tigrfam_Bil_ac_transpt	-	no_errors	SLC10A3	HGNC	ENSG00000126903	tier1	-	-	62	0	0.00	69	4	5.48
SLC12A2	0	genome.wustl.edu	37	5	127487078	127487079	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	127487078	127487079	-	A	INS	SLC12A2	ENST00000262461	human	ensembl	74_37	+1	known	frame_shift_ins	c.2253_2254	p.P753fs	1.000:1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_AA_permease_N,prints_Na/K/Cl_cotranspt1,prints_Na/K/Cl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A2	HGNC	ENSG00000064651	tier1			68	0	0.00	69	14	16.87
SLC25A38	0	genome.wustl.edu	37	3	39431019	39431019	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	39431019	39431019	T	A	SNP	SLC25A38	ENST00000273158	human	ensembl	74_37	+1	known	missense	c.103	p.S35T	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A38	HGNC	ENSG00000144659	tier1	-	-	91	0	0.00	85	12	12.37
SLC51B	0	genome.wustl.edu	37	15	65345468	65345468	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	15	65345468	65345468	T	-	DEL	SLC51B	ENST00000334287	human	ensembl	74_37	+1	known	frame_shift_del	c.353	p.F119fs	0.004	NULL	NULL	-	no_errors	SLC51B	HGNC	ENSG00000186198	tier1			39	0	0.00	36	2	5.26
SLC9A5	0	genome.wustl.edu	37	16	67304975	67304975	+	Silent	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	67304975	67304975	T	C	SNP	SLC9A5	ENST00000299798	human	ensembl	74_37	+1	known	silent	c.2553	p.S851	0.817	NULL	pfam_Cation/H_exchanger,prints_Na/H_exchanger_3/5,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A5	HGNC	ENSG00000135740	tier1	-	-	40	0	0.00	58	10	14.71
SLIT1	0	genome.wustl.edu	37	10	98820457	98820457	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	10	98820457	98820457	T	C	SNP	SLIT1	ENST00000266058	human	ensembl	74_37	-1	known	missense	c.881	p.D294G	1.000	pfam_LRR-contain_N,smart_LRR-contain_N	pfam_Leu-rich_rpt,pfam_Laminin_G,pfam_EG-like_dom,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT1	HGNC	ENSG00000187122	tier1	-	-	66	0	0.00	48	18	27.27
SLITRK5	0	genome.wustl.edu	37	13	88328847	88328847	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	13	88328847	88328847	G	A	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	missense	c.1204	p.A402T	0.967	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300				20	0	0.00	20	3	13.04
SMG1	0	genome.wustl.edu	37	16	18887619	18887619	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	18887619	18887619	T	G	SNP	SMG1	ENST00000389467	human	ensembl	74_37	-1	known	missense	c.1717	p.T573P	1.000	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	SMG1	HGNC	ENSG00000157106	tier1	-	-	253	0	0.00	238	29	10.86
SNHG8	0	genome.wustl.edu	37	4	119200114	119200114	+	RNA	SNP	C	C	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	4	119200114	119200114	C	G	SNP	SNHG8	ENST00000602414	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.645	-	-	-	no_errors	SNHG8	HGNC	ENSG00000269893	tier1	-	-	8	0	0.00	6	6	50.00
SOX5	0	genome.wustl.edu	37	12	23687389	23687389	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	12	23687389	23687389	T	A	SNP	SOX5	ENST00000451604	human	ensembl	74_37	-1	known	missense	c.2056	p.M686L	0.996	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX5	HGNC	ENSG00000134532	tier1	-	-	28	0	0.00	31	5	13.89
SSBP2	0	genome.wustl.edu	37	5	80742690	80742690	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	80742690	80742690	C	T	SNP	SSBP2	ENST00000320672	human	ensembl	74_37	-1	known	missense	c.775	p.A259T	1.000	NULL	smart_LisH_dimerisation,pfscan_LisH_dimerisation,prints_SSDP_DNA-bd	-	no_errors	SSBP2	HGNC	ENSG00000145687	tier1	-	-	61	0	0.00	40	5	11.11
ST8SIA2	0	genome.wustl.edu	37	15	92987970	92987970	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	15	92987970	92987970	T	C	SNP	ST8SIA2	ENST00000268164	human	ensembl	74_37	+1	known	missense	c.653	p.V218A	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST8SIA2	HGNC	ENSG00000140557	tier1	-	-	64	0	0.00	68	22	24.44
SYCP2L	0	genome.wustl.edu	37	6	10955446	10955446	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	10955446	10955446	G	A	SNP	SYCP2L	ENST00000283141	human	ensembl	74_37	+1	known	silent	c.2052	p.L684	0.129	NULL	NULL	-	no_errors	SYCP2L	HGNC	ENSG00000153157	tier1	-	-	34	0	0.00	21	5	19.23
TBC1D3P2	0	genome.wustl.edu	37	17	60342145	60342145	+	RNA	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	60342145	60342145	T	C	SNP	TBC1D3P2	ENST00000581291	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.054	-	-	-	no_errors	TBC1D3P2	HGNC	ENSG00000188755	tier1	-	-	22	0	0.00	22	7	24.14
TCERG1	0	genome.wustl.edu	37	5	145838890	145838890	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	145838890	145838890	G	A	SNP	TCERG1	ENST00000296702	human	ensembl	74_37	+1	known	silent	c.882	p.Q294	1.000	NULL	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1	HGNC	ENSG00000113649	tier1	-	-	76	0	0.00	63	21	25.00
TECRL	0	genome.wustl.edu	37	4	65170930	65170930	+	Silent	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	4	65170930	65170930	A	G	SNP	TECRL	ENST00000381210	human	ensembl	74_37	-1	known	silent	c.684	p.T228	0.998	pfam_3-oxo-5_a-steroid_4-DH_C	pfam_3-oxo-5_a-steroid_4-DH_C,pfscan_3-oxo-5_a-steroid_4-DH_C	-	no_errors	TECRL	HGNC	ENSG00000205678	tier1	-	-	28	0	0.00	21	9	30.00
TGFBR3	0	genome.wustl.edu	37	1	92327064	92327064	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	92327064	92327064	T	A	SNP	TGFBR3	ENST00000212355	human	ensembl	74_37	-1	known	missense	c.25	p.I9F	0.000	NULL	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	TGFBR3	HGNC	ENSG00000069702	tier1	-	-	33	0	0.00	19	11	36.67
THEMIS	0	genome.wustl.edu	37	6	128151008	128151008	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	128151008	128151008	C	T	SNP	THEMIS	ENST00000543064	human	ensembl	74_37	-1	known	missense	c.322	p.G108R	1.000	NULL	NULL	-	no_errors	THEMIS	HGNC	ENSG00000172673	tier1	rs199738235	-	40	0	0.00	30	15	33.33
TLE1	0	genome.wustl.edu	37	9	84235427	84235427	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	9	84235427	84235427	G	A	SNP	TLE1	ENST00000376499	human	ensembl	74_37	-1	known	missense	c.640	p.R214C	1.000	NULL	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Groucho_enhance	-	no_errors	TLE1	HGNC	ENSG00000196781	tier1	-	-	49	0	0.00	34	6	15.00
TMC1	0	genome.wustl.edu	37	9	75431120	75431120	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	9	75431120	75431120	T	C	SNP	TMC1	ENST00000297784	human	ensembl	74_37	+1	known	missense	c.1757	p.M586T	1.000	pfam_TMC	pfam_TMC	-	no_errors	TMC1	HGNC	ENSG00000165091	tier1	-	-	42	0	0.00	40	7	14.89
TMEM161B	0	genome.wustl.edu	37	5	87493695	87493695	+	RNA	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	5	87493695	87493695	G	A	SNP	TMEM161B	ENST00000515293	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.190	-	-	-	no_errors	TMEM161B	HGNC	ENSG00000164180	tier1	-	-	17	0	0.00	12	3	20.00
TP53	0	genome.wustl.edu	37	17	7577117	7577117	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	17	7577117	7577117	A	C	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.821	p.V274G	0.955	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	44	0	0.00	30	16	34.78
TRIM49B	0	genome.wustl.edu	37	11	49059498	49059498	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	11	49059498	49059498	T	G	SNP	TRIM49B	ENST00000332682	human	ensembl	74_37	+1	known	missense	c.1328	p.L443R	0.160	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM49B	HGNC	ENSG00000182053	tier1	-	-	105	0	0.00	93	23	19.83
TRIM56	0	genome.wustl.edu	37	7	100730995	100730995	+	Silent	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	100730995	100730995	G	A	SNP	TRIM56	ENST00000306085	human	ensembl	74_37	+1	known	silent	c.402	p.G134	0.997	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_CheY-like_superfamily,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM56	HGNC	ENSG00000169871				28	0	0.00	79	10	11.24
TRIM58	0	genome.wustl.edu	37	1	248039573	248039573	+	Silent	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	248039573	248039573	T	C	SNP	TRIM58	ENST00000366481	human	ensembl	74_37	+1	known	silent	c.1243	p.L415	0.883	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM58	HGNC	ENSG00000162722	tier1	-	-	98	0	0.00	86	12	12.24
TSHB	0	genome.wustl.edu	37	1	115576592	115576592	+	Splice_Site	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	115576592	115576592	A	C	SNP	TSHB	ENST00000256592	human	ensembl	74_37	+1	known	splice_site	c.163-2	e2-2	0.993	-	-	-	no_errors	TSHB	HGNC	ENSG00000134200	tier1	-	-	110	0	0.00	80	42	34.43
TSHZ2	0	genome.wustl.edu	37	20	51871026	51871026	+	Silent	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	20	51871026	51871026	T	G	SNP	TSHZ2	ENST00000371497	human	ensembl	74_37	+1	known	silent	c.1029	p.S343	0.016	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ2	HGNC	ENSG00000182463	tier1	-	-	49	0	0.00	44	7	13.73
TTC31	0	genome.wustl.edu	37	2	74718460	74718460	+	Silent	SNP	C	C	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	74718460	74718460	C	A	SNP	TTC31	ENST00000442235	human	ensembl	74_37	+1	known	silent	c.210	p.S70	0.002	NULL	NULL	-	no_errors	TTC31	HGNC	ENSG00000115282				25	0	0.00	23	2	8.00
TTLL5	0	genome.wustl.edu	37	14	76211920	76211920	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	14	76211920	76211920	T	C	SNP	TTLL5	ENST00000298832	human	ensembl	74_37	+1	known	missense	c.1483	p.Y495H	1.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL5	HGNC	ENSG00000119685				53	0	0.00	29	3	9.38
TUBE1	0	genome.wustl.edu	37	6	112397266	112397266	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	6	112397266	112397266	T	G	SNP	TUBE1	ENST00000368662	human	ensembl	74_37	-1	known	missense	c.686	p.K229T	1.000	superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Epsilon_tubulin,prints_Tubulin	-	no_errors	TUBE1	HGNC	ENSG00000074935	tier1	-	-	33	0	0.00	39	10	20.41
UBA6-AS1	0	genome.wustl.edu	37	4	68928601	68928601	+	RNA	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	4	68928601	68928601	A	C	SNP	UBA6-AS1	ENST00000500538	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	UBA6-AS1	HGNC	ENSG00000248049	tier1	-	-	58	0	0.00	53	8	13.11
UBR4	0	genome.wustl.edu	37	1	19454777	19454777	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	19454777	19454777	T	G	SNP	UBR4	ENST00000375267	human	ensembl	74_37	-1	known	missense	c.9039	p.E3013D	1.000	superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR4	HGNC	ENSG00000127481	tier1	-	-	50	0	0.00	49	6	10.91
USP21	0	genome.wustl.edu	37	1	161132109	161132109	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	161132109	161132109	G	A	SNP	USP21	ENST00000289865	human	ensembl	74_37	+1	known	missense	c.710	p.R237Q	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP21	HGNC	ENSG00000143258	tier1	-	-	48	0	0.00	28	23	45.10
USP24	0	genome.wustl.edu	37	1	55573052	55573052	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	55573052	55573052	T	G	SNP	USP24	ENST00000407756	human	ensembl	74_37	-1	known	missense	c.4142	p.E1381A	1.000	superfamily_ARM-type_fold	pfam_Peptidase_C19/C67,superfamily_UBA-like,superfamily_ARM-type_fold,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Peptidase_C19/C67	-	no_errors	USP24	HGNC	ENSG00000162402	tier1	-	-	57	0	0.00	50	7	12.28
VAPB	0	genome.wustl.edu	37	20	57009727	57009727	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	20	57009727	57009727	T	G	SNP	VAPB	ENST00000475243	human	ensembl	74_37	+1	known	missense	c.281	p.F94C	1.000	pfam_MSP_dom,superfamily_PapD-like,pirsf_Vesicle-associated_membrane,pfscan_MSP_dom	pfam_MSP_dom,superfamily_PapD-like,pirsf_Vesicle-associated_membrane,pfscan_MSP_dom	-	no_errors	VAPB	HGNC	ENSG00000124164	tier1	-	-	65	0	0.00	49	17	25.76
VWA3A	0	genome.wustl.edu	37	16	22111591	22111591	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	22111591	22111591	G	A	SNP	VWA3A	ENST00000389398	human	ensembl	74_37	+1	known	missense	c.302	p.C101Y	0.011	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA3A	HGNC	ENSG00000175267	tier1	-	-	35	0	0.00	31	4	11.43
VWA5B1	0	genome.wustl.edu	37	1	20644152	20644152	+	Silent	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	1	20644152	20644152	G	T	SNP	VWA5B1	ENST00000289815	human	ensembl	74_37	+1	known	silent	c.693	p.G231	0.999	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA5B1	HGNC	ENSG00000158816				54	0	0.00	46	3	6.12
WDFY4	0	genome.wustl.edu	37	10	50178291	50178291	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	10	50178291	50178291	T	A	SNP	WDFY4	ENST00000325239	human	ensembl	74_37	+1	known	missense	c.8885	p.L2962H	1.000	superfamily_WD40_repeat_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY4	HGNC	ENSG00000128815	tier1	-	-	58	0	0.00	36	5	12.20
WDR11	0	genome.wustl.edu	37	10	122663626	122663626	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	10	122663626	122663626	G	T	SNP	WDR11	ENST00000263461	human	ensembl	74_37	+1	known	missense	c.2999	p.C1000F	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR11	HGNC	ENSG00000120008				22	0	0.00	8	2	20.00
WDR75	0	genome.wustl.edu	37	2	190340080	190340080	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	190340080	190340080	A	C	SNP	WDR75	ENST00000314761	human	ensembl	74_37	+1	known	missense	c.2430	p.K810N	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR75	HGNC	ENSG00000115368	tier1	-	-	36	0	0.00	31	4	11.43
WEE2-AS1	0	genome.wustl.edu	37	7	141427048	141427051	+	RNA	DEL	AGAT	AGAT	-			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	AGAT	AGAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	141427048	141427051	AGAT	-	DEL	WEE2-AS1	ENST00000478332	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000:0.000	-	-	-	no_errors	WEE2-AS1	HGNC	ENSG00000228775	tier1			91	0	0.00	58	29	33.33
WHAMMP2	0	genome.wustl.edu	37	15	28991207	28991207	+	RNA	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	15	28991207	28991207	T	G	SNP	WHAMMP2	ENST00000508764	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	WHAMMP2	HGNC	ENSG00000248334	tier1	-	-	82	0	0.00	70	21	23.08
WNT5A	0	genome.wustl.edu	37	3	55503953	55503953	+	RNA	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	55503953	55503953	T	C	SNP	WNT5A	ENST00000493406	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	WNT5A	HGNC	ENSG00000114251	tier1	-	-	44	0	0.00	17	12	41.38
XDH	0	genome.wustl.edu	37	2	31567572	31567572	+	Silent	SNP	A	A	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	2	31567572	31567572	A	G	SNP	XDH	ENST00000379416	human	ensembl	74_37	-1	known	silent	c.3382	p.L1128	1.000	pfam_AldOxase/xan_DH_Mopterin-bd,superfamily_AldOxase/xan_DH_Mopterin-bd,pirsf_Ald_Oxase/xanthine_DH	pfam_AldOxase/xan_DH_Mopterin-bd,pfam_Mopterin_DH_FAD-bd,pfam_Ald_Oxase/Xan_DH_a/b,pfam_2Fe-2S-bd,pfam_CO_DH_flav_C,pfam_2Fe-2S_ferredoxin-type,superfamily_AldOxase/xan_DH_Mopterin-bd,superfamily_FAD-bd_2,superfamily_Ald_Oxase/Xan_DH_a/b,superfamily_2Fe-2S-bd,superfamily_CO_DH_flav_C,superfamily_2Fe-2S_ferredoxin-type,pirsf_Ald_Oxase/xanthine_DH,pfscan_2Fe-2S_ferredoxin-type,tigrfam_Xanthine_DH_ssu	-	no_errors	XDH	HGNC	ENSG00000158125	tier1	-	-	90	0	0.00	44	35	44.30
XPOT	0	genome.wustl.edu	37	12	64816998	64816998	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	12	64816998	64816998	G	T	SNP	XPOT	ENST00000332707	human	ensembl	74_37	+1	known	missense	c.1156	p.D386Y	1.000	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPOT	HGNC	ENSG00000184575	tier1	-	-	66	0	0.00	76	4	5.00
ZC3H3	0	genome.wustl.edu	37	8	144621396	144621396	+	Silent	SNP	G	G	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	8	144621396	144621396	G	T	SNP	ZC3H3	ENST00000262577	human	ensembl	74_37	-1	known	silent	c.141	p.G47	0.750	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H3	HGNC	ENSG00000014164				85	0	0.00	67	4	5.63
ZFP30	0	genome.wustl.edu	37	19	38126363	38126363	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	38126363	38126363	C	T	SNP	ZFP30	ENST00000351218	human	ensembl	74_37	-1	known	missense	c.1079	p.G360E	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP30	HGNC	ENSG00000120784	tier1	-	-	58	0	0.00	54	5	8.47
ZKSCAN7	0	genome.wustl.edu	37	3	44612745	44612745	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	3	44612745	44612745	G	A	SNP	ZKSCAN7	ENST00000273320	human	ensembl	74_37	+1	known	missense	c.2143	p.G715R	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN7	HGNC	ENSG00000196345	tier1	-	-	87	0	0.00	68	7	9.33
ZNF254	0	genome.wustl.edu	37	19	24309961	24309961	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	24309961	24309961	T	G	SNP	ZNF254	ENST00000357002	human	ensembl	74_37	+1	known	missense	c.1159	p.F387V	0.992	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF254	HGNC	ENSG00000213096				35	0	0.00	43	3	6.52
ZNF263	0	genome.wustl.edu	37	16	3333830	3333830	+	Silent	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	16	3333830	3333830	C	T	SNP	ZNF263	ENST00000219069	human	ensembl	74_37	+1	known	silent	c.12	p.G4	0.000	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF263	HGNC	ENSG00000006194	tier1	-	-	31	0	0.00	32	10	23.81
ZNF285	0	genome.wustl.edu	37	19	44890666	44890666	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	44890666	44890666	G	A	SNP	ZNF285	ENST00000330997	human	ensembl	74_37	-1	known	nonsense	c.1741	p.Q581*	0.114	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF285	HGNC	ENSG00000267508	tier1	-	-	92	0	0.00	62	6	8.82
ZNF285	0	genome.wustl.edu	37	19	44892266	44892266	+	Splice_Site	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	44892266	44892266	T	C	SNP	ZNF285	ENST00000330997	human	ensembl	74_37	-1	known	splice_site	c.143-2	e3-2	0.017	-	-	-	no_errors	ZNF285	HGNC	ENSG00000267508				10	0	0.00	7	3	30.00
ZNF521	0	genome.wustl.edu	37	18	22806956	22806956	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	18	22806956	22806956	T	G	SNP	ZNF521	ENST00000361524	human	ensembl	74_37	-1	known	missense	c.926	p.K309T	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF521	HGNC	ENSG00000198795	tier1	-	-	79	0	0.00	91	10	9.90
ZNF534	0	genome.wustl.edu	37	19	52941308	52941308	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	52941308	52941308	T	C	SNP	ZNF534	ENST00000332323	human	ensembl	74_37	+1	known	missense	c.634	p.S212P	0.243	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF534	HGNC	ENSG00000198633	tier1	-	-	26	0	0.00	18	5	21.74
ZNF616	0	genome.wustl.edu	37	19	52619801	52619801	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	52619801	52619801	T	A	SNP	ZNF616	ENST00000600228	human	ensembl	74_37	-1	known	missense	c.616	p.I206L	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF616	HGNC	ENSG00000204611	tier1	-	-	67	0	0.00	87	15	14.71
ZNF676	0	genome.wustl.edu	37	19	22375898	22375898	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	22375898	22375898	T	C	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.50	p.K17R	0.335	superfamily_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109	tier1	-	-	86	0	0.00	59	35	37.23
ZNF677	0	genome.wustl.edu	37	19	53741702	53741702	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	53741702	53741702	T	C	SNP	ZNF677	ENST00000333952	human	ensembl	74_37	-1	known	missense	c.278	p.N93S	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF677	HGNC	ENSG00000197928	tier1	-	-	59	0	0.00	43	7	14.00
ZNF677	0	genome.wustl.edu	37	19	53747121	53747121	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	19	53747121	53747121	T	C	SNP	ZNF677	ENST00000333952	human	ensembl	74_37	-1	known	missense	c.45	p.I15M	0.864	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF677	HGNC	ENSG00000197928	tier1	-	-	70	0	0.00	54	15	21.74
ZNF707	0	genome.wustl.edu	37	8	144776365	144776365	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	8	144776365	144776365	T	C	SNP	ZNF707	ENST00000358656	human	ensembl	74_37	+1	known	missense	c.781	p.S261P	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF707	HGNC	ENSG00000181135	tier1	-	-	51	0	0.00	36	7	16.28
ZNF713	0	genome.wustl.edu	37	7	56007556	56007556	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OU-01A-11D-A28B-09	TCGA-L5-A4OU-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c810202c-4f14-44fd-a6bd-9444a3e129d2	4193b59f-a175-4ab2-844b-1975c5563fbc	7	56007556	56007556	C	T	SNP	ZNF713	ENST00000429591	human	ensembl	74_37	+1	known	missense	c.1150	p.P384S	0.997	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF713	HGNC	ENSG00000178665	tier1	-	-	40	0	0.00	32	17	34.69
