Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
A2M	0	genome.wustl.edu	37	12	9265954	9265954	+	Splice_Site	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	9265954	9265954	A	C	SNP	A2M	ENST00000318602	human	ensembl	74_37	-1	known	splice_site	c.270+2	e2+2	1.000	-	-	-	no_errors	A2M	HGNC	ENSG00000175899	tier1	-	-	34	0	0.00	25	23	47.92
A3GALT2	0	genome.wustl.edu	37	1	33778163	33778163	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	33778163	33778163	C	T	SNP	A3GALT2	ENST00000442999	human	ensembl	74_37	-1	novel	missense	c.136	p.V46I	0.000	NULL	pfam_Glyco_trans_6	-	no_errors	A3GALT2	HGNC	ENSG00000184389	tier1	-	-	28	0	0.00	50	5	9.09
ABCA12	0	genome.wustl.edu	37	2	215884502	215884502	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	215884502	215884502	A	C	SNP	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	missense	c.1306	p.L436V	0.750	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452	tier1	-	-	10	0	0.00	8	4	33.33
ABCC8	0	genome.wustl.edu	37	11	17415923	17415923	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	17415923	17415923	C	T	SNP	ABCC8	ENST00000302539	human	ensembl	74_37	-1	known	missense	c.4438	p.E1480K	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,prints_Sulphorea_rcpt,prints_Surea_rcpt-1,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC8	HGNC	ENSG00000006071	tier1	-	-	58	0	0.00	61	5	7.58
ACSM2A	0	genome.wustl.edu	37	16	20489909	20489909	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	16	20489909	20489909	T	A	SNP	ACSM2A	ENST00000219054	human	ensembl	74_37	+1	known	missense	c.1191	p.D397E	0.037	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM2A	HGNC	ENSG00000183747	tier1	-	-	45	0	0.00	49	8	14.04
ADAMDEC1	0	genome.wustl.edu	37	8	24261565	24261565	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	24261565	24261565	G	T	SNP	ADAMDEC1	ENST00000256412	human	ensembl	74_37	+1	known	missense	c.1370	p.G457V	0.000	pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B	-	no_errors	ADAMDEC1	HGNC	ENSG00000134028	tier1	-	-	67	0	0.00	108	7	6.09
ADAMTS12	0	genome.wustl.edu	37	5	33534969	33534969	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	33534969	33534969	T	G	SNP	ADAMTS12	ENST00000504830	human	ensembl	74_37	-1	known	missense	c.4575	p.K1525N	0.002	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS12	HGNC	ENSG00000151388	tier1	-	-	64	0	0.00	61	34	35.79
ADAMTS16	0	genome.wustl.edu	37	5	5235215	5235215	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	5235215	5235215	T	G	SNP	ADAMTS16	ENST00000274181	human	ensembl	74_37	+1	known	missense	c.1939	p.F647V	1.000	NULL	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS16	HGNC	ENSG00000145536	tier1	-	-	27	0	0.00	20	17	45.95
ADAMTS3	0	genome.wustl.edu	37	4	73185073	73185073	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	73185073	73185073	C	T	SNP	ADAMTS3	ENST00000286657	human	ensembl	74_37	-1	known	missense	c.1328	p.G443D	1.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B	-	no_errors	ADAMTS3	HGNC	ENSG00000156140	tier1	-	-	65	0	0.00	58	10	14.71
AK7	0	genome.wustl.edu	37	14	96871175	96871175	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	14	96871175	96871175	A	C	SNP	AK7	ENST00000267584	human	ensembl	74_37	+1	known	missense	c.376	p.M126L	0.391	NULL	pfam_Dpy-30_motif,pfam_Adenylate_kin,superfamily_P-loop_NTPase	-	no_errors	AK7	HGNC	ENSG00000140057	tier1	-	-	57	0	0.00	34	21	38.18
AKAP12	0	genome.wustl.edu	37	6	151674115	151674116	+	In_Frame_Ins	INS	-	-	GGA			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	151674115	151674116	-	GGA	INS	AKAP12	ENST00000253332	human	ensembl	74_37	+1	known	in_frame_ins	c.4589_4590	p.I1530in_frame_insMD	0.000:0.000	NULL	pfam_Pkinase-A_anch_WSK-motif,pfam_RII_binding_1	-	no_errors	AKAP12	HGNC	ENSG00000131016	tier1			45	0	0.00	47	30	38.96
AKR1D1	0	genome.wustl.edu	37	7	137801463	137801463	+	RNA	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	7	137801463	137801463	A	C	SNP	AKR1D1	ENST00000468877	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AKR1D1	HGNC	ENSG00000122787	tier1	-	-	31	0	0.00	45	26	36.62
ALOX12P2	0	genome.wustl.edu	37	17	6801973	6801973	+	RNA	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	6801973	6801973	T	C	SNP	ALOX12P2	ENST00000570890	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.121	-	-	-	no_errors	ALOX12P2	HGNC	ENSG00000262943	tier1	-	-	77	0	0.00	93	7	7.00
ANP32AP1	0	genome.wustl.edu	37	15	35530031	35530031	+	RNA	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	15	35530031	35530031	G	A	SNP	ANP32AP1	ENST00000560832	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	ANP32AP1	HGNC	ENSG00000259516	tier1	-	-	102	0	0.00	72	57	44.19
ARMCX4	0	genome.wustl.edu	37	X	100746753	100746753	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	100746753	100746753	A	C	SNP	ARMCX4	ENST00000423738	human	ensembl	74_37	+1	putative	missense	c.3177	p.E1059D	0.000	NULL	pfam_ARM-rpt_dom,superfamily_ARM-type_fold,pfscan_Armadillo	-	no_errors	ARMCX4	HGNC	ENSG00000196440	tier1	-	-	51	0	0.00	40	17	29.82
ATG2A	0	genome.wustl.edu	37	11	64677211	64677211	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	64677211	64677211	G	T	SNP	ATG2A	ENST00000421419	human	ensembl	74_37	-1	known	missense	c.2049	p.S683R	0.988	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2A	HGNC	ENSG00000110046				52	0	0.00	76	4	5.00
ATP10A	0	genome.wustl.edu	37	15	25940173	25940173	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	15	25940173	25940173	A	C	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	missense	c.2881	p.S961A	0.001	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190	tier1	-	-	70	0	0.00	47	28	36.84
ATP10A	0	genome.wustl.edu	37	15	25959021	25959021	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	15	25959021	25959021	A	G	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	missense	c.2144	p.V715A	0.995	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190	tier1	-	-	70	0	0.00	67	19	22.09
ATP10B	0	genome.wustl.edu	37	5	160029694	160029694	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	160029694	160029694	C	T	SNP	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	missense	c.3253	p.D1085N	1.000	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10B	HGNC	ENSG00000118322				25	0	0.00	26	8	23.53
ATP6V0D1	0	genome.wustl.edu	37	16	67487538	67487538	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	16	67487538	67487538	C	T	SNP	ATP6V0D1	ENST00000290949	human	ensembl	74_37	-1	known	missense	c.211	p.D71N	1.000	pfam_ATPase_V0-cplx_csu/dsu,superfamily_ATPase_V0-cplx_csu/dsu,pirsf_ATPase_V0-cplx_dsu	pfam_ATPase_V0-cplx_csu/dsu,superfamily_ATPase_V0-cplx_csu/dsu,pirsf_ATPase_V0-cplx_dsu	-	no_errors	ATP6V0D1	HGNC	ENSG00000159720				51	0	0.00	55	3	5.17
BCL11A	0	genome.wustl.edu	37	2	60780615	60780617	+	RNA	DEL	AGC	AGC	-			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	AGC	AGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	60780615	60780617	AGC	-	DEL	BCL11A	ENST00000409351	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.909:0.897:0.883	-	-	-	no_errors	BCL11A	HGNC	ENSG00000119866	tier1			10	0	0.00	5	4	44.44
BCR	0	genome.wustl.edu	37	22	23651720	23651720	+	RNA	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	22	23651720	23651720	G	A	SNP	BCR	ENST00000436990	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	BCR	HGNC	ENSG00000186716	tier1	-	-	106	0	0.00	119	27	18.49
BICC1	0	genome.wustl.edu	37	10	60562964	60562964	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	10	60562964	60562964	G	A	SNP	BICC1	ENST00000373886	human	ensembl	74_37	+1	known	missense	c.2143	p.A715T	1.000	NULL	pfam_KH_dom_type_1,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_KH_dom,smart_SAM,pfscan_SAM,pfscan_KH_dom_type_1	-	no_errors	BICC1	HGNC	ENSG00000122870	tier1	-	-	15	0	0.00	24	8	25.00
BMP3	0	genome.wustl.edu	37	4	81952653	81952653	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	81952653	81952653	C	T	SNP	BMP3	ENST00000282701	human	ensembl	74_37	+1	known	missense	c.215	p.A72V	0.006	pfam_TGF-b_N,pirsf_BMP3/GDF10	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,pirsf_BMP3/GDF10	-	no_errors	BMP3	HGNC	ENSG00000152785	tier1	-	-	45	0	0.00	37	18	32.73
BMS1P8	0	genome.wustl.edu	37	16	33490018	33490018	+	RNA	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	16	33490018	33490018	T	C	SNP	BMS1P8	ENST00000567036	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.977	-	-	-	no_errors	BMS1P8	HGNC	ENSG00000260518	tier1	rs28645082	-	14	0	0.00	11	9	45.00
BOD1L1	0	genome.wustl.edu	37	4	13592067	13592067	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	13592067	13592067	C	G	SNP	BOD1L1	ENST00000040738	human	ensembl	74_37	-1	known	missense	c.8152	p.E2718Q	0.191	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219				41	0	0.00	35	3	7.89
BPTF	0	genome.wustl.edu	37	17	65941986	65941986	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	65941986	65941986	C	T	SNP	BPTF	ENST00000321892	human	ensembl	74_37	+1	known	nonsense	c.7540	p.Q2514*	1.000	NULL	pfam_Bromodomain,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BPTF	HGNC	ENSG00000171634	tier1	-	-	46	0	0.00	58	36	38.30
C10orf71	0	genome.wustl.edu	37	10	50533184	50533184	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	10	50533184	50533184	C	T	SNP	C10orf71	ENST00000374144	human	ensembl	74_37	+1	known	missense	c.2594	p.T865I	1.000	NULL	NULL	-	no_errors	C10orf71	HGNC	ENSG00000177354	tier1	-	-	55	0	0.00	28	18	39.13
C14orf80	0	genome.wustl.edu	37	14	105959065	105959065	+	Silent	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	14	105959065	105959065	G	T	SNP	C14orf80	ENST00000392523	human	ensembl	74_37	+1	known	silent	c.579	p.L193	0.999	NULL	NULL	-	no_errors	C14orf80	HGNC	ENSG00000185347				20	0	0.00	16	4	19.05
C3orf55	0	genome.wustl.edu	37	3	157363570	157363570	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	157363570	157363570	T	C	SNP	C3orf55	ENST00000461040	human	ensembl	74_37	+1	putative	missense	c.97	p.S33P	0.000	NULL	NULL	-	no_errors	C3orf55	HGNC	ENSG00000174899	tier1	-	-	43	0	0.00	94	10	9.62
C3orf65	0	genome.wustl.edu	37	3	185434228	185434228	+	Splice_Site	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	185434228	185434228	G	T	SNP	C3orf65	ENST00000296270	human	ensembl	74_37	+1	known	splice_site	c.62-1	e2-1	0.001	-	-	-	no_errors	C3orf65	HGNC	ENSG00000163915	tier1	-	-	24	0	0.00	30	4	11.76
C9orf152	0	genome.wustl.edu	37	9	112969817	112969817	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	9	112969817	112969817	A	G	SNP	C9orf152	ENST00000400613	human	ensembl	74_37	-1	known	missense	c.43	p.W15R	0.852	NULL	NULL	-	no_errors	C9orf152	HGNC	ENSG00000188959				20	0	0.00	26	3	10.34
CACNA1A	0	genome.wustl.edu	37	19	13319692	13319694	+	In_Frame_Del	DEL	GAT	GAT	-			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	GAT	GAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	13319692	13319694	GAT	-	DEL	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	in_frame_del	c.6658_6656	p.H2219in_frame_del	1.000:1.000:1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837	tier1			15	0	0.00	20	4	16.67
CACNA2D3	0	genome.wustl.edu	37	3	54798378	54798378	+	Silent	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	54798378	54798378	T	C	SNP	CACNA2D3	ENST00000288197	human	ensembl	74_37	+1	known	silent	c.1380	p.T460	0.990	pfam_Cache_domain	pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D3	HGNC	ENSG00000157445	tier1	-	-	44	0	0.00	30	20	40.00
CAPN12	0	genome.wustl.edu	37	19	39229076	39229076	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	39229076	39229076	G	A	SNP	CAPN12	ENST00000328867	human	ensembl	74_37	-1	known	missense	c.872	p.T291M	0.030	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN12	HGNC	ENSG00000182472	tier1	-	-	74	0	0.00	64	26	28.89
CCDC37	0	genome.wustl.edu	37	3	126135332	126135332	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	126135332	126135332	G	T	SNP	CCDC37	ENST00000393425	human	ensembl	74_37	+1	known	missense	c.399	p.W133C	0.998	NULL	superfamily_SuperAg_toxin_C	-	no_errors	CCDC37	HGNC	ENSG00000163885				27	0	0.00	30	9	23.08
CCDC86	0	genome.wustl.edu	37	11	60609946	60609946	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	60609946	60609946	C	T	SNP	CCDC86	ENST00000227520	human	ensembl	74_37	+1	known	nonsense	c.349	p.Q117*	0.470	NULL	NULL	-	no_errors	CCDC86	HGNC	ENSG00000110104	tier1	-	-	23	0	0.00	19	14	42.42
CD1E	0	genome.wustl.edu	37	1	158324300	158324300	+	Silent	SNP	T	T	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	158324300	158324300	T	A	SNP	CD1E	ENST00000368167	human	ensembl	74_37	+1	known	silent	c.192	p.T64	0.600	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1E	HGNC	ENSG00000158488	tier1	-	-	31	0	0.00	42	4	8.70
CDH12	0	genome.wustl.edu	37	5	21783502	21783502	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	21783502	21783502	G	A	SNP	CDH12	ENST00000382254	human	ensembl	74_37	-1	known	missense	c.1358	p.A453V	0.738	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH12	HGNC	ENSG00000154162				47	0	0.00	42	3	6.67
CELP	0	genome.wustl.edu	37	9	135962487	135962487	+	RNA	SNP	G	G	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	9	135962487	135962487	G	C	SNP	CELP	ENST00000411440	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CELP	HGNC	ENSG00000170827	tier1	rs76117078	-	9	0	0.00	7	11	61.11
CELP	0	genome.wustl.edu	37	9	135962494	135962494	+	RNA	DEL	C	C	-			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	9	135962494	135962494	C	0	DEL	CELP	ENST00000411440	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CELP	HGNC	ENSG00000170827				9	0	0.00	5	12	70.59
CENPF	0	genome.wustl.edu	37	1	214813616	214813616	+	Silent	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	214813616	214813616	T	C	SNP	CENPF	ENST00000366955	human	ensembl	74_37	+1	known	silent	c.1935	p.N645	0.004	NULL	pfam_Centromere_CenpF_N,pfam_Centromere_CenpF_leu-rich_rpt,pfam_CenpF/LEK1_Rb-prot-bd	-	no_errors	CENPF	HGNC	ENSG00000117724				20	0	0.00	24	3	11.11
CHD2	0	genome.wustl.edu	37	15	93522467	93522467	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	15	93522467	93522467	G	T	SNP	CHD2	ENST00000557381	human	ensembl	74_37	+1	putative	missense	c.2830	p.D944Y	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD2	HGNC	ENSG00000173575	tier1	-	-	32	0	0.00	45	4	8.16
CHD8	0	genome.wustl.edu	37	14	21899011	21899011	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	14	21899011	21899011	G	A	SNP	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	silent	c.792	p.A264	0.975	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888				22	0	0.00	31	3	8.82
CHM	0	genome.wustl.edu	37	X	85233730	85233730	+	RNA	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	85233730	85233730	A	C	SNP	CHM	ENST00000487515	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	CHM	HGNC	ENSG00000188419	tier1	-	-	25	0	0.00	25	10	28.57
CHST7	0	genome.wustl.edu	37	X	46433545	46433545	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	46433545	46433545	C	T	SNP	CHST7	ENST00000276055	human	ensembl	74_37	+1	known	missense	c.179	p.A60V	1.000	pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST7	HGNC	ENSG00000147119	tier1	-	-	33	0	0.00	25	13	34.21
CIDEA	0	genome.wustl.edu	37	18	12254815	12254815	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	18	12254815	12254815	G	A	SNP	CIDEA	ENST00000522713	human	ensembl	74_37	+1	known	missense	c.433	p.D145N	0.000	NULL	NULL	-	no_errors	CIDEA	HGNC	ENSG00000176194	tier1	-	-	52	0	0.00	66	4	5.71
CIRBP-AS1	0	genome.wustl.edu	37	19	1268245	1268245	+	RNA	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	1268245	1268245	C	T	SNP	CIRBP-AS1	ENST00000585832	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CIRBP-AS1	HGNC	ENSG00000267493	tier1	-	-	48	0	0.00	41	13	24.07
CNGB3	0	genome.wustl.edu	37	8	87755756	87755756	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	87755756	87755756	T	G	SNP	CNGB3	ENST00000320005	human	ensembl	74_37	-1	known	missense	c.100	p.S34R	0.000	NULL	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGB3	HGNC	ENSG00000170289	tier1	-	-	71	0	0.00	122	20	14.08
CNTN1	0	genome.wustl.edu	37	12	41337803	41337803	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	41337803	41337803	C	T	SNP	CNTN1	ENST00000347616	human	ensembl	74_37	+1	known	missense	c.1514	p.T505M	1.000	pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN1	HGNC	ENSG00000018236	tier1	-	-	19	0	0.00	10	19	65.52
COLEC12	0	genome.wustl.edu	37	18	347200	347200	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	18	347200	347200	G	A	SNP	COLEC12	ENST00000400256	human	ensembl	74_37	-1	known	missense	c.422	p.A141V	0.874	NULL	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	COLEC12	HGNC	ENSG00000158270	tier1	-	-	75	0	0.00	90	29	24.37
CPS1	0	genome.wustl.edu	37	2	211512630	211512630	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	211512630	211512630	A	C	SNP	CPS1	ENST00000430249	human	ensembl	74_37	+1	known	missense	c.3203	p.N1068T	1.000	pfam_CarbamoylP_synth_lsu_N,superfamily_PreATP-grasp_dom,tigrfam_CarbamoylP_synth_lsu	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_CarbamoylP_synth_lsu_oligo,pfam_GATASE,pfam_CarbamoylP_synth_lsu_N,pfam_MGS-like_dom,pfam_ATP-grasp_carboxylate-amine,pfam_Dala_Dala_lig_C,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu	-	no_errors	CPS1	HGNC	ENSG00000021826	tier1	-	-	80	0	0.00	72	14	16.28
CPS1	0	genome.wustl.edu	37	2	211542621	211542621	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	211542621	211542621	T	G	SNP	CPS1	ENST00000430249	human	ensembl	74_37	+1	known	missense	c.4433	p.L1478R	1.000	superfamily_MGS-like_dom,tigrfam_CarbamoylP_synth_lsu	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_CarbamoylP_synth_lsu_oligo,pfam_GATASE,pfam_CarbamoylP_synth_lsu_N,pfam_MGS-like_dom,pfam_ATP-grasp_carboxylate-amine,pfam_Dala_Dala_lig_C,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu	-	no_errors	CPS1	HGNC	ENSG00000021826	tier1	-	-	23	0	0.00	34	22	39.29
CPSF1	0	genome.wustl.edu	37	8	145624696	145624696	+	Silent	SNP	C	C	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	145624696	145624696	C	G	SNP	CPSF1	ENST00000349769	human	ensembl	74_37	-1	known	silent	c.1362	p.S454	0.017	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	CPSF1	HGNC	ENSG00000071894	tier1	-	-	48	0	0.00	76	4	5.00
CR1	0	genome.wustl.edu	37	1	207755263	207755263	+	Silent	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	207755263	207755263	G	T	SNP	CR1	ENST00000367049	human	ensembl	74_37	+1	known	silent	c.5217	p.G1739	0.998	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1	HGNC	ENSG00000203710	tier1	-	-	149	0	0.00	165	28	14.51
CRHR1-IT1	0	genome.wustl.edu	37	17	43718893	43718893	+	RNA	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	43718893	43718893	C	T	SNP	CRHR1-IT1	ENST00000578000	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.395	-	-	-	no_errors	CRHR1-IT1	HGNC	ENSG00000204650	tier1	-	-	22	0	0.00	23	11	32.35
CSMD1	0	genome.wustl.edu	37	8	3855585	3855585	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	3855585	3855585	A	C	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.658	p.S220A	0.985	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	55	0	0.00	44	22	33.33
CSMD3	0	genome.wustl.edu	37	8	113249528	113249528	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	113249528	113249528	A	C	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.10518	p.N3506K	1.000	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	58	0	0.00	47	23	32.86
CSTF1	0	genome.wustl.edu	37	20	54978617	54978617	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	20	54978617	54978617	G	A	SNP	CSTF1	ENST00000217109	human	ensembl	74_37	+1	known	missense	c.1130	p.S377N	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CSTF1	HGNC	ENSG00000101138	tier1	-	-	53	0	0.00	71	8	10.13
CXXC4	0	genome.wustl.edu	37	4	105393329	105393330	+	RNA	INS	-	-	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	105393329	105393330	-	T	INS	CXXC4	ENST00000466963	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.073	-	-	-	no_errors	CXXC4	HGNC	ENSG00000168772	tier1			26	0	0.00	31	10	24.39
CYLC1	0	genome.wustl.edu	37	X	83124910	83124910	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	83124910	83124910	C	T	SNP	CYLC1	ENST00000329312	human	ensembl	74_37	+1	known	missense	c.55	p.P19S	0.084	NULL	NULL	-	no_errors	CYLC1	HGNC	ENSG00000183035	tier1	-	-	143	0	0.00	158	11	6.51
DBT	0	genome.wustl.edu	37	1	100681541	100681541	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	100681541	100681541	T	G	SNP	DBT	ENST00000370132	human	ensembl	74_37	-1	known	missense	c.770	p.K257T	1.000	pfam_2-oxoacid_DH_actylTfrase	pfam_2-oxoacid_DH_actylTfrase,pfam_Biotin_lipoyl,pfam_E3-bd,superfamily_Single_hybrid_motif,superfamily_E3-bd,pfscan_Biotin_lipoyl	-	no_errors	DBT	HGNC	ENSG00000137992	tier1	-	-	67	0	0.00	40	42	51.22
DEFB118	0	genome.wustl.edu	37	20	29960724	29960724	+	Silent	SNP	A	A	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	20	29960724	29960724	A	T	SNP	DEFB118	ENST00000253381	human	ensembl	74_37	+1	known	silent	c.123	p.G41	0.000	NULL	NULL	-	no_errors	DEFB118	HGNC	ENSG00000131068	tier1	-	-	37	0	0.00	65	17	20.73
DGCR14	0	genome.wustl.edu	37	22	19121821	19121821	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	22	19121821	19121821	C	T	SNP	DGCR14	ENST00000252137	human	ensembl	74_37	-1	known	missense	c.1319	p.S440N	0.993	NULL	pfam_Nuclear_protein_DGCR14	-	no_errors	DGCR14	HGNC	ENSG00000100056	tier1	-	-	156	0	0.00	178	15	7.73
DGUOK	0	genome.wustl.edu	37	2	74184313	74184313	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	74184313	74184313	A	T	SNP	DGUOK	ENST00000264093	human	ensembl	74_37	+1	known	missense	c.653	p.Y218F	1.000	pfam_Deoxynucleoside_kinase,superfamily_P-loop_NTPase	pfam_Deoxynucleoside_kinase,superfamily_P-loop_NTPase	-	no_errors	DGUOK	HGNC	ENSG00000114956	tier1	-	-	26	0	0.00	38	4	9.52
DKC1	0	genome.wustl.edu	37	X	154002914	154002914	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	154002914	154002914	T	C	SNP	DKC1	ENST00000369550	human	ensembl	74_37	+1	known	missense	c.1193	p.L398P	1.000	NULL	pfam_Dyskerin-like,pfam_PsdUridine_synth,pfam_PUA,superfamily_PsdUridine_synth_cat_dom,superfamily_PUA-like_domain,smart_PUA,pfscan_PUA,tigrfam_tRNA_PsdUridine_synth_B_fam,tigrfam_Uncharacterised_CHP00451	-	no_errors	DKC1	HGNC	ENSG00000130826	tier1	rs199422253	-	30	0	0.00	56	10	15.15
DLGAP2	0	genome.wustl.edu	37	8	1497818	1497818	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	1497818	1497818	A	C	SNP	DLGAP2	ENST00000421627	human	ensembl	74_37	+1	known	missense	c.959	p.K320T	1.000	NULL	pfam_GKAP	-	no_errors	DLGAP2	HGNC	ENSG00000198010	tier1	-	-	43	0	0.00	43	5	10.42
DNAH5	0	genome.wustl.edu	37	5	13717530	13717530	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	13717530	13717530	T	C	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.12599	p.K4200R	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	30	0	0.00	11	13	54.17
DRD3	0	genome.wustl.edu	37	3	113850244	113850244	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	113850244	113850244	G	A	SNP	DRD3	ENST00000383673	human	ensembl	74_37	-1	known	missense	c.727	p.L243F	0.620	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Dopamine_D3_rcpt,prints_GPCR_Rhodpsn,prints_Dopamine_rcpt	-	no_errors	DRD3	HGNC	ENSG00000151577	tier1	-	-	62	0	0.00	76	7	8.33
DSEL	0	genome.wustl.edu	37	18	65179356	65179356	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	18	65179356	65179356	T	G	SNP	DSEL	ENST00000310045	human	ensembl	74_37	-1	known	missense	c.2520	p.K840N	0.963	NULL	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,superfamily_Chondroitin_lyas	-	no_errors	DSEL	HGNC	ENSG00000171451	tier1	-	-	36	0	0.00	46	13	22.03
EDA2R	0	genome.wustl.edu	37	X	65824292	65824292	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	65824292	65824292	G	T	SNP	EDA2R	ENST00000253392	human	ensembl	74_37	-1	known	missense	c.323	p.T108K	0.715	NULL	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_27	-	no_errors	EDA2R	HGNC	ENSG00000131080	tier1	-	-	126	0	0.00	143	9	5.92
EDA2R	0	genome.wustl.edu	37	X	65824293	65824293	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	65824293	65824293	T	A	SNP	EDA2R	ENST00000253392	human	ensembl	74_37	-1	known	missense	c.322	p.T108S	0.921	NULL	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_27	-	no_errors	EDA2R	HGNC	ENSG00000131080	tier1	-	-	126	0	0.00	142	9	5.96
EIF4ENIF1	0	genome.wustl.edu	37	22	31859732	31859732	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	22	31859732	31859732	C	T	SNP	EIF4ENIF1	ENST00000330125	human	ensembl	74_37	-1	known	missense	c.520	p.D174N	1.000	pfam_eIF4E_transporter	pfam_eIF4E_transporter	-	no_errors	EIF4ENIF1	HGNC	ENSG00000184708	tier1	-	-	75	0	0.00	75	9	10.71
ELL	0	genome.wustl.edu	37	19	18557181	18557181	+	Silent	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	18557181	18557181	G	T	SNP	ELL	ENST00000262809	human	ensembl	74_37	-1	known	silent	c.1642	p.R548	0.836	pfam_Occludin_RNApol2_elong_fac_ELL	pfam_RNA_pol_II_elong_fac_ELL,pfam_Occludin_RNApol2_elong_fac_ELL	-	no_errors	ELL	HGNC	ENSG00000105656				15	0	0.00	14	2	12.50
EMP1	0	genome.wustl.edu	37	12	13364407	13364408	+	RNA	INS	-	-	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	13364407	13364408	-	T	INS	EMP1	ENST00000542289	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.990:0.991	-	-	-	no_errors	EMP1	HGNC	ENSG00000134531	tier1			30	0	0.00	20	22	52.38
ENSG00000189316	0	genome.wustl.edu	37	7	64350004	64350004	+	RNA	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	7	64350004	64350004	G	T	SNP	ENSG00000189316	ENST00000340779	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.135	-	-	-	no_errors	RP11-797H7.5	Clone_based_vega_gene	ENSG00000189316	tier1	-	-	64	0	0.00	41	13	24.07
ENSG00000203849	0	genome.wustl.edu	37	1	142716704	142716704	+	RNA	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	142716704	142716704	G	T	SNP	ENSG00000203849	ENST00000595144	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-417J8.6	Clone_based_vega_gene	ENSG00000203849	tier1	-	-	57	0	0.00	66	13	16.46
ENSG00000205790	0	genome.wustl.edu	37	19	4682879	4682880	+	RNA	DEL	AG	AG	-			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	4682879	4682880	AG	-	DEL	ENSG00000205790	ENST00000381796	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.006	-	-	-	no_errors	AC005594.3	Clone_based_vega_gene	ENSG00000205790	tier1			35	0	0.00	35	4	10.26
ENSG00000214581	0	genome.wustl.edu	37	16	34682216	34682216	+	RNA	SNP	A	A	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	16	34682216	34682216	A	G	SNP	ENSG00000214581	ENST00000568619	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-80F22.10	Clone_based_vega_gene	ENSG00000214581	tier1	-	-	96	0	0.00	115	24	17.27
ENSG00000221457	0	genome.wustl.edu	37	3	147798632	147798632	+	RNA	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	147798632	147798632	G	A	SNP	ENSG00000221457	ENST00000408530	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AC092958.1	Clone_based_ensembl_gene	ENSG00000221457	tier1	-	-	33	0	0.00	24	29	54.72
ENSG00000226200	0	genome.wustl.edu	37	10	52390895	52390895	+	RNA	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	10	52390895	52390895	C	A	SNP	ENSG00000226200	ENST00000443374	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.741	-	-	-	no_errors	RP11-50E11.3	Clone_based_vega_gene	ENSG00000226200	tier1	-	-	73	0	0.00	90	17	15.74
ENSG00000233836	0	genome.wustl.edu	37	19	24014646	24014646	+	RNA	SNP	A	A	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	24014646	24014646	A	T	SNP	ENSG00000233836	ENST00000471224	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-255H23.2	Clone_based_vega_gene	ENSG00000233836	tier1	-	-	17	0	0.00	25	9	26.47
ENSG00000253917	0	genome.wustl.edu	37	4	3948525	3948525	+	RNA	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	3948525	3948525	G	T	SNP	ENSG00000253917	ENST00000281228	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.823	-	-	-	no_errors	AC226119.5	Clone_based_vega_gene	ENSG00000253917	tier1	-	-	167	0	0.00	143	17	10.62
EPHA7	0	genome.wustl.edu	37	6	93956601	93956601	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	93956601	93956601	C	T	SNP	EPHA7	ENST00000369303	human	ensembl	74_37	-1	known	missense	c.2635	p.E879K	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA7	HGNC	ENSG00000135333	tier1	-	-	60	0	0.00	63	7	10.00
EPHX3	0	genome.wustl.edu	37	19	15342188	15342188	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	15342188	15342188	G	T	SNP	EPHX3	ENST00000221730	human	ensembl	74_37	-1	known	missense	c.349	p.L117I	1.000	prints_Epox_hydrolase-like	pfam_AB_hydrolase_1,prints_Epox_hydrolase-like,prints_AB_hydrolase_1	-	no_errors	EPHX3	HGNC	ENSG00000105131				10	0	0.00	21	4	16.00
EPN2	0	genome.wustl.edu	37	17	19216546	19216546	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	19216546	19216546	C	T	SNP	EPN2	ENST00000314728	human	ensembl	74_37	+1	known	silent	c.1101	p.G367	0.017	NULL	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN2	HGNC	ENSG00000072134	tier1	-	-	61	0	0.00	34	40	53.33
EVC2	0	genome.wustl.edu	37	4	5624676	5624676	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	5624676	5624676	A	G	SNP	EVC2	ENST00000344408	human	ensembl	74_37	-1	known	missense	c.2089	p.F697L	0.001	NULL	pfam_Limbin	-	no_errors	EVC2	HGNC	ENSG00000173040				23	0	0.00	23	4	14.81
F8	0	genome.wustl.edu	37	X	154158672	154158672	+	Silent	SNP	A	A	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	154158672	154158672	A	T	SNP	F8	ENST00000360256	human	ensembl	74_37	-1	known	silent	c.3393	p.T1131	0.000	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010	tier1	-	-	25	0	0.00	36	10	21.74
FAM19A1	0	genome.wustl.edu	37	3	68466475	68466475	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	68466475	68466475	A	G	SNP	FAM19A1	ENST00000478136	human	ensembl	74_37	+1	known	missense	c.164	p.K55R	1.000	pfam_Chemokine-like_FAM19A2	pfam_Chemokine-like_FAM19A2	-	no_errors	FAM19A1	HGNC	ENSG00000183662	tier1	-	-	28	0	0.00	24	6	20.00
FAM47A	0	genome.wustl.edu	37	X	34149455	34149455	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	34149455	34149455	C	T	SNP	FAM47A	ENST00000346193	human	ensembl	74_37	-1	known	missense	c.941	p.R314H	0.025	NULL	NULL	-	no_errors	FAM47A	HGNC	ENSG00000185448	tier1	-	-	98	0	0.00	96	6	5.88
FANCI	0	genome.wustl.edu	37	15	89811630	89811630	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	15	89811630	89811630	G	T	SNP	FANCI	ENST00000310775	human	ensembl	74_37	+1	known	missense	c.756	p.E252D	0.048	NULL	NULL	-	no_errors	FANCI	HGNC	ENSG00000140525	tier1	-	-	47	0	0.00	76	4	5.00
FARP1	0	genome.wustl.edu	37	13	99047715	99047715	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	13	99047715	99047715	C	G	SNP	FARP1	ENST00000376586	human	ensembl	74_37	+1	known	missense	c.1399	p.P467A	1.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM-adjacent,pfam_FERM_central,superfamily_DH-domain,superfamily_FERM_central,smart_Band_41_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_FERM_domain,pfscan_Pleckstrin_homology,pfscan_DH-domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FARP1	HGNC	ENSG00000152767	tier1	-	-	26	0	0.00	35	5	12.50
FAT4	0	genome.wustl.edu	37	4	126240637	126240637	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	126240637	126240637	A	G	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.3071	p.D1024G	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	tier1	-	-	24	0	0.00	32	9	21.95
FAT4	0	genome.wustl.edu	37	4	126373295	126373295	+	Silent	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	126373295	126373295	A	C	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	silent	c.11124	p.T3708	0.003	NULL	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	tier1	-	-	76	0	0.00	82	21	20.39
FAT4	0	genome.wustl.edu	37	4	126411990	126411990	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	126411990	126411990	T	G	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.14013	p.S4671R	0.899	NULL	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	tier1	-	-	40	0	0.00	43	11	20.37
FBN3	0	genome.wustl.edu	37	19	8161451	8161451	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	8161451	8161451	G	A	SNP	FBN3	ENST00000270509	human	ensembl	74_37	-1	known	missense	c.5416	p.R1806W	1.000	smart_EGF-like_Ca-bd_dom,pirsf_FBN	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449	tier1	-	-	31	0	0.00	25	10	28.57
FLVCR2	0	genome.wustl.edu	37	14	76091048	76091048	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	14	76091048	76091048	C	T	SNP	FLVCR2	ENST00000238667	human	ensembl	74_37	+1	known	missense	c.905	p.A302V	0.001	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,superfamily_Trimer_LpxA-like,pfscan_MFS_dom	-	no_errors	FLVCR2	HGNC	ENSG00000119686	tier1	-	-	57	0	0.00	55	23	29.49
FMNL2	0	genome.wustl.edu	37	2	153482063	153482063	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	153482063	153482063	A	T	SNP	FMNL2	ENST00000288670	human	ensembl	74_37	+1	known	missense	c.1949	p.E650V	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin,prints_Wilms_tumour	-	no_errors	FMNL2	HGNC	ENSG00000157827	tier1	-	-	23	0	0.00	24	4	14.29
FMR1NB	0	genome.wustl.edu	37	X	147088344	147088344	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	147088344	147088344	T	C	SNP	FMR1NB	ENST00000370467	human	ensembl	74_37	+1	known	missense	c.520	p.F174L	0.003	superfamily_P_trefoil	superfamily_P_trefoil	-	no_errors	FMR1NB	HGNC	ENSG00000176988	tier1	-	-	68	0	0.00	71	16	18.39
FOLH1	0	genome.wustl.edu	37	11	49208204	49208204	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	49208204	49208204	C	A	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	nonsense	c.631	p.G211*	1.000	pfam_Protease-assoc_domain	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	tier1	-	-	40	0	0.00	65	9	12.16
FOXL2	0	genome.wustl.edu	37	3	138665331	138665331	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	138665331	138665331	G	A	SNP	FOXL2	ENST00000330315	human	ensembl	74_37	-1	known	silent	c.234	p.S78	0.993	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXL2	HGNC	ENSG00000183770	tier1	-	-	48	0	0.00	50	20	28.57
FUT9	0	genome.wustl.edu	37	6	96651724	96651724	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	96651724	96651724	G	T	SNP	FUT9	ENST00000302103	human	ensembl	74_37	+1	known	missense	c.693	p.L231F	1.000	pfam_Glyco_trans_10	pfam_Glyco_trans_10	-	no_errors	FUT9	HGNC	ENSG00000172461				29	0	0.00	29	2	6.45
FZD1	0	genome.wustl.edu	37	7	90895993	90895993	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	7	90895993	90895993	T	G	SNP	FZD1	ENST00000287934	human	ensembl	74_37	+1	known	missense	c.1798	p.F600V	1.000	pfam_Frizzled,pfscan_GPCR_2-like	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD1	HGNC	ENSG00000157240	tier1	-	-	31	0	0.00	62	23	27.06
GALNT9	0	genome.wustl.edu	37	12	132683738	132683738	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	132683738	132683738	C	G	SNP	GALNT9	ENST00000328957	human	ensembl	74_37	-1	known	missense	c.1478	p.C493S	1.000	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT9	HGNC	ENSG00000182870	tier1	-	-	161	0	0.00	150	17	10.18
GHDC	0	genome.wustl.edu	37	17	40343180	40343180	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	40343180	40343180	A	C	SNP	GHDC	ENST00000301671	human	ensembl	74_37	-1	known	missense	c.938	p.L313R	0.584	pfam_GH3	pfam_GH3	-	no_errors	GHDC	HGNC	ENSG00000167925	tier1	-	-	9	0	0.00	19	5	20.83
GJA5	0	genome.wustl.edu	37	1	147230991	147230991	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	147230991	147230991	C	A	SNP	GJA5	ENST00000271348	human	ensembl	74_37	-1	known	missense	c.356	p.G119V	0.002	NULL	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin40	-	no_errors	GJA5	HGNC	ENSG00000143140	tier1	-	-	31	0	0.00	20	6	23.08
GJE1	0	genome.wustl.edu	37	6	142455173	142455173	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	142455173	142455173	A	C	SNP	GJE1	ENST00000450456	human	ensembl	74_37	+1	known	missense	c.226	p.S76R	0.989	pfam_Connexin_N	pfam_Connexin_CCC,pfam_Connexin_N	-	no_errors	GJE1	HGNC	ENSG00000203733	tier1	-	-	43	0	0.00	40	30	42.86
GPR113	0	genome.wustl.edu	37	2	26534262	26534262	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	26534262	26534262	C	A	SNP	GPR113	ENST00000333478	human	ensembl	74_37	-1	known	missense	c.1737	p.L579F	0.953	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR113	HGNC	ENSG00000173567	tier1	-	-	27	0	0.00	38	8	17.39
GRID2	0	genome.wustl.edu	37	4	93511341	93511341	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	93511341	93511341	G	A	SNP	GRID2	ENST00000282020	human	ensembl	74_37	+1	known	missense	c.148	p.D50N	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID2	HGNC	ENSG00000152208	tier1	-	-	55	0	0.00	44	7	13.73
GRID2	0	genome.wustl.edu	37	4	94137897	94137897	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	94137897	94137897	C	T	SNP	GRID2	ENST00000282020	human	ensembl	74_37	+1	known	silent	c.798	p.N266	0.972	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID2	HGNC	ENSG00000152208	tier1	-	-	56	0	0.00	42	10	19.23
GRIPAP1	0	genome.wustl.edu	37	X	48834841	48834841	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	48834841	48834841	T	C	SNP	GRIPAP1	ENST00000376441	human	ensembl	74_37	-1	known	missense	c.1937	p.E646G	1.000	NULL	superfamily_Prefoldin	-	no_errors	GRIPAP1	HGNC	ENSG00000068400				39	0	0.00	46	13	22.03
GRM3	0	genome.wustl.edu	37	7	86493638	86493638	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	7	86493638	86493638	G	A	SNP	GRM3	ENST00000394720	human	ensembl	74_37	+1	known	missense	c.1534	p.G512R	1.000	NULL	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_mtglu_rcpt	-	no_errors	GRM3	HGNC	ENSG00000198822				36	0	0.00	48	3	5.88
GSDMC	0	genome.wustl.edu	37	8	130762254	130762254	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	130762254	130762254	G	C	SNP	GSDMC	ENST00000276708	human	ensembl	74_37	-1	known	missense	c.1195	p.L399V	0.171	pfam_Gasdermin	pfam_Gasdermin	-	no_errors	GSDMC	HGNC	ENSG00000147697	tier1	-	-	39	0	0.00	46	5	9.80
GSN	0	genome.wustl.edu	37	9	124080951	124080951	+	Silent	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	9	124080951	124080951	C	A	SNP	GSN	ENST00000373818	human	ensembl	74_37	+1	known	silent	c.1137	p.V379	0.674	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	pfam_Gelsolin_dom,smart_Villin/Gelsolin,prints_Villin/Gelsolin	-	no_errors	GSN	HGNC	ENSG00000148180	tier1	-	-	67	0	0.00	59	4	6.35
H2BFM	0	genome.wustl.edu	37	X	103294940	103294940	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	103294940	103294940	G	A	SNP	H2BFM	ENST00000243297	human	ensembl	74_37	+1	known	missense	c.706	p.A236T	1.000	superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	H2BFM	HGNC	ENSG00000101812	tier1	-	-	52	0	0.00	45	14	23.33
HBB	0	genome.wustl.edu	37	11	5247854	5247854	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	5247854	5247854	T	C	SNP	HBB	ENST00000335295	human	ensembl	74_37	-1	known	missense	c.268	p.S90G	1.000	pfam_Globin,superfamily_Globin-like,pfscan_Globin	pfam_Globin,superfamily_Globin-like,pfscan_Globin,prints_Haemoglobin_b	-	no_errors	HBB	HGNC	ENSG00000244734	tier1	-	-	85	0	0.00	68	25	26.88
HDLBP	0	genome.wustl.edu	37	2	242179451	242179451	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	242179451	242179451	C	A	SNP	HDLBP	ENST00000310931	human	ensembl	74_37	-1	known	missense	c.2256	p.K752N	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	HDLBP	HGNC	ENSG00000115677				26	0	0.00	33	3	8.33
HEPH	0	genome.wustl.edu	37	X	65413355	65413355	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	65413355	65413355	A	C	SNP	HEPH	ENST00000519389	human	ensembl	74_37	+1	known	missense	c.1406	p.K469T	1.000	superfamily_Cupredoxin	pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Cupredoxin	-	no_errors	HEPH	HGNC	ENSG00000089472	tier1	-	-	45	0	0.00	44	11	20.00
HERC1	0	genome.wustl.edu	37	15	64066901	64066901	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	15	64066901	64066901	G	A	SNP	HERC1	ENST00000443617	human	ensembl	74_37	-1	known	missense	c.922	p.R308C	0.999	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC	ENSG00000103657	tier1	-	-	39	0	0.00	55	9	14.06
HERC4	0	genome.wustl.edu	37	10	69716603	69716603	+	RNA	DEL	A	A	-			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	10	69716603	69716603	A	-	DEL	HERC4	ENST00000480158	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HERC4	HGNC	ENSG00000148634	tier1			12	0	0.00	20	3	13.04
HIST1H1E	0	genome.wustl.edu	37	6	26156794	26156795	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	26156794	26156795	TG	-	DEL	HIST1H1E	ENST00000304218	human	ensembl	74_37	+1	known	frame_shift_del	c.176_177	p.L59fs	0.756:0.761	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1E	HGNC	ENSG00000168298	tier1			67	0	0.00	49	18	26.87
HIST1H1E	0	genome.wustl.edu	37	6	26156799	26156800	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	26156799	26156800	-	C	INS	HIST1H1E	ENST00000304218	human	ensembl	74_37	+1	known	frame_shift_ins	c.181_182	p.L62fs	1.000:1.000	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1E	HGNC	ENSG00000168298	tier1			69	0	0.00	48	23	32.39
HIST1H2BO	0	genome.wustl.edu	37	6	27861281	27861281	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	27861281	27861281	G	A	SNP	HIST1H2BO	ENST00000303806	human	ensembl	74_37	+1	known	missense	c.41	p.G14D	1.000	superfamily_Histone-fold	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BO	HGNC	ENSG00000196331	tier1	-	-	45	0	0.00	53	4	7.02
HIVEP3	0	genome.wustl.edu	37	1	42049977	42049977	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	42049977	42049977	G	A	SNP	HIVEP3	ENST00000247584	human	ensembl	74_37	-1	known	silent	c.492	p.F164	0.266	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP3	HGNC	ENSG00000127124	tier1	-	-	31	0	0.00	30	18	37.50
HOXB8	0	genome.wustl.edu	37	17	46690707	46690707	+	Silent	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	46690707	46690707	G	T	SNP	HOXB8	ENST00000239144	human	ensembl	74_37	-1	known	silent	c.589	p.R197	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_HTH_motif	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_HTH_motif	-	no_errors	HOXB8	HGNC	ENSG00000120068	tier1	-	-	43	0	0.00	71	5	6.58
HP1BP3	0	genome.wustl.edu	37	1	21076257	21076257	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	21076257	21076257	T	A	SNP	HP1BP3	ENST00000312239	human	ensembl	74_37	-1	known	missense	c.1100	p.Y367F	1.000	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15	-	no_errors	HP1BP3	HGNC	ENSG00000127483	tier1	-	-	35	0	0.00	23	4	14.81
HRNR	0	genome.wustl.edu	37	1	152188213	152188213	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	152188213	152188213	G	A	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	silent	c.5892	p.Y1964	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915	tier1	rs141147625	-	411	0	0.00	633	43	6.36
HSP90AA4P	0	genome.wustl.edu	37	4	190396094	190396094	+	RNA	DEL	A	A	-			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	190396094	190396094	A	-	DEL	HSP90AA4P	ENST00000378770	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HSP90AA4P	HGNC	ENSG00000205100	tier1			102	0	0.00	109	12	9.92
HUWE1	0	genome.wustl.edu	37	X	53602122	53602122	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	53602122	53602122	T	A	SNP	HUWE1	ENST00000262854	human	ensembl	74_37	-1	known	missense	c.6090	p.Q2030H	1.000	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/Ts_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758	tier1	-	-	43	0	0.00	31	24	43.64
HYPK	0	genome.wustl.edu	37	15	44093677	44093677	+	RNA	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	15	44093677	44093677	G	A	SNP	HYPK	ENST00000498605	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	HYPK	HGNC	ENSG00000242028	tier1	-	-	38	0	0.00	17	19	52.78
IFI44	0	genome.wustl.edu	37	1	79125009	79125009	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	79125009	79125009	G	A	SNP	IFI44	ENST00000370747	human	ensembl	74_37	+1	known	missense	c.853	p.E285K	0.001	superfamily_P-loop_NTPase	pfam_TLDc,superfamily_P-loop_NTPase	-	no_errors	IFI44	HGNC	ENSG00000137965	tier1	-	-	26	0	0.00	11	6	35.29
IFI6	0	genome.wustl.edu	37	1	27994770	27994770	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	27994770	27994770	C	T	SNP	IFI6	ENST00000339145	human	ensembl	74_37	-1	known	missense	c.289	p.A97T	0.577	pfam_IFI6/IFI27	pfam_IFI6/IFI27	-	no_errors	IFI6	HGNC	ENSG00000126709				8	0	0.00	1	3	75.00
IFIH1	0	genome.wustl.edu	37	2	163128830	163128830	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	163128830	163128830	A	T	SNP	IFIH1	ENST00000263642	human	ensembl	74_37	-1	known	missense	c.2522	p.I841N	0.253	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_RIG-I_C-RD,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_CARD,superfamily_P-loop_NTPase,superfamily_DEATH-like_dom,superfamily_ARM-type_fold,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	IFIH1	HGNC	ENSG00000115267				45	0	0.00	41	3	6.82
IGLL1	0	genome.wustl.edu	37	22	23917190	23917190	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	22	23917190	23917190	G	T	SNP	IGLL1	ENST00000330377	human	ensembl	74_37	-1	known	missense	c.286	p.H96N	0.029	NULL	pfam_Ig_C1-set,pfam_CD80_C2-set,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	IGLL1	HGNC	ENSG00000128322	tier1	-	-	61	0	0.00	74	6	7.50
IGSF22	0	genome.wustl.edu	37	11	18737090	18737090	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	18737090	18737090	C	G	SNP	IGSF22	ENST00000513874	human	ensembl	74_37	-1	known	missense	c.1420	p.E474Q	0.998	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF22	HGNC	ENSG00000179057	tier1	-	-	63	0	0.00	101	6	5.61
IL12RB2	0	genome.wustl.edu	37	1	67796382	67796382	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	67796382	67796382	G	A	SNP	IL12RB2	ENST00000262345	human	ensembl	74_37	+1	known	missense	c.847	p.D283N	0.185	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_IgC2-like_lig-bd,pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL12RB2	HGNC	ENSG00000081985	tier1	-	-	37	0	0.00	22	4	15.38
IQSEC2	0	genome.wustl.edu	37	X	53349734	53349734	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	53349734	53349734	C	T	SNP	IQSEC2	ENST00000396435	human	ensembl	74_37	-1	known	silent	c.588	p.P196	0.993	NULL	pfam_Sec7_dom,superfamily_Sec7_dom,superfamily_P-loop_NTPase,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_IQ_motif_EF-hand-BS,pfscan_Sec7_dom	-	no_errors	IQSEC2	HGNC	ENSG00000124313	tier1	-	-	16	0	0.00	11	6	35.29
IRAK1	0	genome.wustl.edu	37	X	153281953	153281953	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	153281953	153281953	G	C	SNP	IRAK1	ENST00000369980	human	ensembl	74_37	-1	known	missense	c.1171	p.L391V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,superfamily_Kinase-like_dom,superfamily_DEATH-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	IRAK1	HGNC	ENSG00000184216	tier1	-	-	92	0	0.00	71	72	50.35
ITGB5	0	genome.wustl.edu	37	3	124483298	124483298	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	124483298	124483298	G	A	SNP	ITGB5	ENST00000296181	human	ensembl	74_37	-1	known	silent	c.2244	p.I748	1.000	pirsf_Integrin_bsu,pfam_Integrin_bsu_cyt_dom,prints_Integrin_bsu	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt_dom,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,smart_VWF_A,prints_Integrin_bsu	-	no_errors	ITGB5	HGNC	ENSG00000082781	tier1	-	-	28	0	0.00	42	12	22.22
KAT5	0	genome.wustl.edu	37	11	65486590	65486590	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	65486590	65486590	C	T	SNP	KAT5	ENST00000341318	human	ensembl	74_37	+1	known	missense	c.1579	p.R527W	1.000	superfamily_Acyl_CoA_acyltransferase	pfam_MOZ_SAS,pfam_Tudor-knot,superfamily_Acyl_CoA_acyltransferase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow	-	no_errors	KAT5	HGNC	ENSG00000172977	tier1	-	-	33	0	0.00	33	8	19.51
KAT6A	0	genome.wustl.edu	37	8	41798620	41798620	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	41798620	41798620	G	A	SNP	KAT6A	ENST00000265713	human	ensembl	74_37	-1	known	missense	c.2779	p.P927S	0.126	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6A	HGNC	ENSG00000083168				43	0	0.00	57	4	6.56
KCNA5	0	genome.wustl.edu	37	12	5154236	5154236	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	5154236	5154236	C	T	SNP	KCNA5	ENST00000252321	human	ensembl	74_37	+1	known	missense	c.923	p.S308F	0.062	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.5,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA5	HGNC	ENSG00000130037	tier1	-	-	16	0	0.00	14	5	26.32
KCNC3	0	genome.wustl.edu	37	19	50826891	50826891	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	50826891	50826891	G	A	SNP	KCNC3	ENST00000477616	human	ensembl	74_37	-1	known	missense	c.1319	p.T440M	1.000	pfam_Ion_trans_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_K_chnl_volt-dep_Kv3_ID,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3.3,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC3	HGNC	ENSG00000131398	tier1	-	-	46	0	0.00	71	5	6.58
KCNJ12	0	genome.wustl.edu	37	17	21319654	21319654	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	21319654	21319654	G	A	SNP	KCNJ12	ENST00000331718	human	ensembl	74_37	+1	known	missense	c.1000	p.E334K	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185				101	0	0.00	96	6	5.83
KDM2A	0	genome.wustl.edu	37	11	67012683	67012683	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	67012683	67012683	G	A	SNP	KDM2A	ENST00000529006	human	ensembl	74_37	+1	known	silent	c.1587	p.K529	1.000	NULL	pfam_Znf_CXXC,pfam_F-box_dom,pfam_JmjC_dom,superfamily_Znf_FYVE_PHD,smart_JmjC_dom,smart_Znf_PHD,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KDM2A	HGNC	ENSG00000173120	tier1	-	-	36	0	0.00	33	23	41.07
KIAA0195	0	genome.wustl.edu	37	17	73494368	73494368	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	73494368	73494368	G	A	SNP	KIAA0195	ENST00000314256	human	ensembl	74_37	+1	known	missense	c.3602	p.R1201H	0.000	pfam_ATPase_P-typ_cation-transptr_C	pfam_ATPase_P-typ_cation-transptr_C	-	no_errors	KIAA0195	HGNC	ENSG00000177728	tier1	-	-	54	0	0.00	32	21	39.62
KIAA0922	0	genome.wustl.edu	37	4	154523312	154523312	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	154523312	154523312	G	C	SNP	KIAA0922	ENST00000409959	human	ensembl	74_37	+1	known	missense	c.2275	p.D759H	1.000	NULL	pfam_DUF3651_TMEM131	-	no_errors	KIAA0922	HGNC	ENSG00000121210	tier1	-	-	29	0	0.00	30	4	11.76
KIAA1191	0	genome.wustl.edu	37	5	175777628	175777628	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	175777628	175777628	G	A	SNP	KIAA1191	ENST00000298569	human	ensembl	74_37	-1	known	silent	c.447	p.A149	0.995	NULL	NULL	-	no_errors	KIAA1191	HGNC	ENSG00000122203	tier1	-	-	86	0	0.00	42	35	45.45
KIAA1210	0	genome.wustl.edu	37	X	118222391	118222391	+	Silent	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	118222391	118222391	A	C	SNP	KIAA1210	ENST00000402510	human	ensembl	74_37	-1	known	silent	c.2802	p.T934	0.000	NULL	NULL	-	no_errors	KIAA1210	HGNC	ENSG00000250423	tier1	-	-	28	0	0.00	20	15	42.86
KIAA1210	0	genome.wustl.edu	37	X	118222580	118222580	+	Silent	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	118222580	118222580	T	C	SNP	KIAA1210	ENST00000402510	human	ensembl	74_37	-1	known	silent	c.2613	p.E871	0.000	NULL	NULL	-	no_errors	KIAA1210	HGNC	ENSG00000250423	tier1	-	-	30	0	0.00	39	10	20.41
KIAA1804	0	genome.wustl.edu	37	1	233512219	233512219	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	233512219	233512219	T	A	SNP	KIAA1804	ENST00000366624	human	ensembl	74_37	+1	known	missense	c.1870	p.L624I	0.022	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MLK4	Uniprot_gn	ENSG00000143674	tier1	-	-	44	0	0.00	67	14	17.28
KIAA2022	0	genome.wustl.edu	37	X	73961267	73961267	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	73961267	73961267	T	A	SNP	KIAA2022	ENST00000055682	human	ensembl	74_37	-1	known	missense	c.3125	p.E1042V	1.000	NULL	NULL	-	no_errors	KIAA2022	HGNC	ENSG00000050030	tier1	-	-	48	0	0.00	45	8	15.09
KIR2DL2	0	genome.wustl.edu	37	GL000209.1	75590	75591	+	Frame_Shift_Ins	INS	-	-	TC			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	GL000209.1	75590	75591	-	TC	INS	KIR2DL2	ENST00000400847	human	ensembl	74_37	+1	known	frame_shift_ins	c.672_673	p.A227fs	NULL	NULL	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR2DL2	HGNC	ENSG00000215764	tier1			115	0	0.00	122	37	23.27
KLK4	0	genome.wustl.edu	37	19	51410265	51410265	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	51410265	51410265	T	G	SNP	KLK4	ENST00000324041	human	ensembl	74_37	-1	known	missense	c.690	p.Q230H	0.005	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK4	HGNC	ENSG00000167749	tier1	-	-	43	0	0.00	46	13	22.03
KLK4	0	genome.wustl.edu	37	19	51411862	51411862	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	51411862	51411862	C	T	SNP	KLK4	ENST00000324041	human	ensembl	74_37	-1	known	missense	c.448	p.V150I	0.006	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK4	HGNC	ENSG00000167749	tier1	-	-	39	0	0.00	41	17	29.31
KLRF1	0	genome.wustl.edu	37	12	9994450	9994450	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	9994450	9994450	G	A	SNP	KLRF1	ENST00000279544	human	ensembl	74_37	+1	known	missense	c.377	p.C126Y	0.999	superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	KLRF1	HGNC	ENSG00000150045				34	0	0.00	41	6	12.77
KRT14	0	genome.wustl.edu	37	17	39739836	39739836	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	39739836	39739836	G	C	SNP	KRT14	ENST00000167586	human	ensembl	74_37	-1	known	missense	c.1020	p.N340K	1.000	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT14	HGNC	ENSG00000186847	tier1	-	-	56	0	0.00	444	111	20.00
KRT14	0	genome.wustl.edu	37	17	39742711	39742711	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	39742711	39742711	G	A	SNP	KRT14	ENST00000167586	human	ensembl	74_37	-1	known	silent	c.376	p.L126	1.000	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT14	HGNC	ENSG00000186847	tier1	-	-	167	0	0.00	1273	344	21.27
KRTAP4-9	0	genome.wustl.edu	37	17	39262065	39262065	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	39262065	39262065	C	G	SNP	KRTAP4-9	ENST00000391415	human	ensembl	74_37	+1	known	missense	c.425	p.S142C	0.014	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-9	HGNC	ENSG00000212722	tier1	-	-	193	0	0.00	184	11	5.64
KRTAP4-9	0	genome.wustl.edu	37	17	39262140	39262140	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	39262140	39262140	C	T	SNP	KRTAP4-9	ENST00000391415	human	ensembl	74_37	+1	known	missense	c.500	p.S167F	0.896	NULL	pfam_Keratin-assoc	-	no_errors	KRTAP4-9	HGNC	ENSG00000212722	tier1	-	-	175	0	0.00	167	10	5.65
LAMA1	0	genome.wustl.edu	37	18	6950865	6950865	+	Silent	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	18	6950865	6950865	G	T	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	silent	c.8313	p.G2771	0.793	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	49	0	0.00	54	5	8.47
LAMA1	0	genome.wustl.edu	37	18	6961752	6961752	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	18	6961752	6961752	G	A	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.7459	p.R2487W	0.986	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	31	0	0.00	31	5	13.89
LARP1B	0	genome.wustl.edu	37	4	128999117	128999117	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	128999117	128999117	G	T	SNP	LARP1B	ENST00000326639	human	ensembl	74_37	+1	known	missense	c.217	p.A73S	1.000	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,smart_DM15,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP1B	HGNC	ENSG00000138709	tier1	-	-	34	0	0.00	30	4	11.76
LETM2	0	genome.wustl.edu	37	8	38250325	38250325	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	38250325	38250325	C	A	SNP	LETM2	ENST00000379957	human	ensembl	74_37	+1	known	missense	c.313	p.P105T	0.002	NULL	pfam_LETM1	-	no_errors	LETM2	HGNC	ENSG00000165046				16	0	0.00	42	5	10.64
LEUTX	0	genome.wustl.edu	37	19	40276514	40276514	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	40276514	40276514	C	T	SNP	LEUTX	ENST00000396841	human	ensembl	74_37	+1	novel	silent	c.246	p.D82	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,pfscan_Homeobox_dom	-	no_errors	LEUTX	HGNC	ENSG00000213921				20	0	0.00	40	3	6.98
LILRB2	0	genome.wustl.edu	37	19	54784144	54784147	+	Frame_Shift_Del	DEL	CAGA	CAGA	-			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	CAGA	CAGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	54784144	54784147	CAGA	0	DEL	LILRB2	ENST00000391749	human	ensembl	74_37	-1	known	frame_shift_del	c.45_42	p.S14fs	0.003:0.001:0.005:0.023	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB2	HGNC	ENSG00000131042				109	0	0.00	179	14	7.25
LINGO3	0	genome.wustl.edu	37	19	2291315	2291315	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	2291315	2291315	C	T	SNP	LINGO3	ENST00000404279	human	ensembl	74_37	-1	known	missense	c.461	p.R154Q	0.206	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LINGO3	HGNC	ENSG00000220008	tier1	-	-	56	0	0.00	48	11	18.64
LMOD1	0	genome.wustl.edu	37	1	201869675	201869675	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	201869675	201869675	G	A	SNP	LMOD1	ENST00000367288	human	ensembl	74_37	-1	known	missense	c.466	p.R156W	0.263	NULL	pfam_Tropomodulin,pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	LMOD1	HGNC	ENSG00000163431				33	0	0.00	53	4	7.02
LOC100131825	0	genome.wustl.edu	37	1	159166613	159166613	+	RNA	DEL	T	T	-			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	159166613	159166613	T	-	DEL	LOC100131825	ENST00000415675	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTA-134P22.2	Clone_based_vega_gene	ENSG00000225670	tier1			16	0	0.00	12	4	25.00
LOC100506013	0	genome.wustl.edu	37	4	165798450	165798450	+	RNA	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	165798450	165798450	G	A	SNP	LOC100506013	ENST00000507152	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-366M4.3	Clone_based_vega_gene	ENSG00000248329	tier1	-	-	40	0	0.00	29	6	17.14
LOC101927345	0	genome.wustl.edu	37	1	143391544	143391544	+	RNA	SNP	A	A	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	143391544	143391544	A	T	SNP	LOC101927345	ENST00000412492	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.024	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261	tier1	-	-	187	0	0.00	207	24	10.39
LOC441666	0	genome.wustl.edu	37	10	42832803	42832803	+	RNA	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	10	42832803	42832803	T	C	SNP	LOC441666	ENST00000609841	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.021	-	-	-	no_errors	RP11-313J2.1	Clone_based_vega_gene	ENSG00000215146	tier1	-	-	36	0	0.00	45	18	28.57
LOXL2	0	genome.wustl.edu	37	8	23190975	23190975	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	23190975	23190975	A	T	SNP	LOXL2	ENST00000389131	human	ensembl	74_37	-1	known	missense	c.905	p.V302E	1.000	superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_Lysyl_oxidase,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_Lysyl_oxidase,prints_SRCR	-	no_errors	LOXL2	HGNC	ENSG00000134013				30	0	0.00	47	3	6.00
LPCAT1	0	genome.wustl.edu	37	5	1489926	1489926	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	1489926	1489926	C	G	SNP	LPCAT1	ENST00000283415	human	ensembl	74_37	-1	known	missense	c.541	p.D181H	1.000	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	LPCAT1	HGNC	ENSG00000153395	tier1	-	-	94	0	0.00	314	42	11.80
LRP1B	0	genome.wustl.edu	37	2	141458111	141458111	+	Silent	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	141458111	141458111	A	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	silent	c.6507	p.A2169	1.000	smart_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	32	0	0.00	28	17	37.78
LRRC7	0	genome.wustl.edu	37	1	70446102	70446102	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	70446102	70446102	G	T	SNP	LRRC7	ENST00000035383	human	ensembl	74_37	+1	known	missense	c.638	p.W213L	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	LRRC7	HGNC	ENSG00000033122	tier1	-	-	53	0	0.00	34	14	29.17
LRRFIP2	0	genome.wustl.edu	37	3	37100291	37100291	+	Silent	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	37100291	37100291	G	T	SNP	LRRFIP2	ENST00000336686	human	ensembl	74_37	-1	known	silent	c.1860	p.I620	1.000	pfam_Leu-rich_rep_flightless-int_pr,superfamily_Prefoldin	pfam_Leu-rich_rep_flightless-int_pr,superfamily_bHLH_dom,superfamily_Prefoldin	-	no_errors	LRRFIP2	HGNC	ENSG00000093167				32	0	0.00	40	4	9.09
LTBP1	0	genome.wustl.edu	37	2	33622241	33622241	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	33622241	33622241	G	A	SNP	LTBP1	ENST00000354476	human	ensembl	74_37	+1	known	missense	c.4879	p.G1627S	1.000	superfamily_TB_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP1	HGNC	ENSG00000049323	tier1	-	-	68	0	0.00	67	34	33.66
MACF1	0	genome.wustl.edu	37	1	39734616	39734617	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	39734616	39734617	-	C	INS	MACF1	ENST00000496804	human	ensembl	74_37	+1	known	frame_shift_ins	c.247_248	p.D86fs	0.002:0.001	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1			30	0	0.00	57	9	13.64
MAF1	0	genome.wustl.edu	37	8	145160670	145160670	+	Splice_Site	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	145160670	145160670	G	A	SNP	MAF1	ENST00000322428	human	ensembl	74_37	+1	known	splice_site	c.83+1	e1+1	1.000	-	-	-	no_errors	MAF1	HGNC	ENSG00000179632	tier1	-	-	22	0	0.00	37	16	29.63
MAGEB5	0	genome.wustl.edu	37	X	26235715	26235715	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	26235715	26235715	A	C	SNP	MAGEB5	ENST00000379029	human	ensembl	74_37	+1	known	missense	c.297	p.E99D	0.001	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEB5	HGNC	ENSG00000188408	tier1	-	-	28	0	0.00	25	14	35.90
MAGED1	0	genome.wustl.edu	37	X	51644982	51644982	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	51644982	51644982	T	G	SNP	MAGED1	ENST00000375695	human	ensembl	74_37	+1	known	missense	c.2461	p.F821V	0.998	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGED1	HGNC	ENSG00000179222	tier1	-	-	24	0	0.00	36	12	25.00
MAN2B2	0	genome.wustl.edu	37	4	6596426	6596426	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	6596426	6596426	C	T	SNP	MAN2B2	ENST00000285599	human	ensembl	74_37	+1	known	missense	c.1024	p.R342C	0.002	pfam_Glyco_hydro_38_N,superfamily_Glyco_hydro/deAcase_b/a-brl	pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2B2	HGNC	ENSG00000013288	tier1	-	-	55	0	0.00	40	7	14.89
MBTPS2	0	genome.wustl.edu	37	X	21869646	21869646	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	21869646	21869646	C	T	SNP	MBTPS2	ENST00000379484	human	ensembl	74_37	+1	known	missense	c.458	p.P153L	1.000	prints_MBTPS2	pfam_Peptidase_M50,superfamily_PDZ,prints_MBTPS2	-	no_errors	MBTPS2	HGNC	ENSG00000012174	tier1	-	-	40	0	0.00	50	22	30.56
MERTK	0	genome.wustl.edu	37	2	112722829	112722829	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	112722829	112722829	C	T	SNP	MERTK	ENST00000295408	human	ensembl	74_37	+1	known	silent	c.819	p.S273	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Rhodanese-like_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MERTK	HGNC	ENSG00000153208	tier1	-	-	41	0	0.00	39	32	45.07
MGAT5	0	genome.wustl.edu	37	2	135199370	135199370	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	135199370	135199370	C	T	SNP	MGAT5	ENST00000281923	human	ensembl	74_37	+1	known	silent	c.1911	p.A637	1.000	NULL	NULL	-	no_errors	MGAT5	HGNC	ENSG00000152127	tier1	-	-	47	0	0.00	51	16	23.88
MIR129-2	0	genome.wustl.edu	37	11	43603026	43603026	+	RNA	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	43603026	43603026	G	A	SNP	MIR129-2	ENST00000362207	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR129-2	HGNC	ENSG00000199077	tier1	-	-	15	0	0.00	30	9	23.08
MIR485	0	genome.wustl.edu	37	14	101521822	101521823	+	RNA	DEL	TT	TT	-			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	14	101521822	101521823	TT	-	DEL	MIR485	ENST00000385292	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	MIR485	HGNC	ENSG00000208027	tier1			26	0	0.00	34	8	19.05
MROH8	0	genome.wustl.edu	37	20	35769704	35769704	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	20	35769704	35769704	A	C	SNP	MROH8	ENST00000400441	human	ensembl	74_37	-1	known	missense	c.1349	p.F450C	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH8	HGNC	ENSG00000101353	tier1	-	-	23	0	0.00	44	7	13.73
MTCH1	0	genome.wustl.edu	37	6	36938449	36938449	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	36938449	36938449	G	A	SNP	MTCH1	ENST00000373627	human	ensembl	74_37	-1	known	missense	c.928	p.R310W	1.000	superfamily_Mt_carrier_dom	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	MTCH1	HGNC	ENSG00000137409				20	0	0.00	31	2	6.06
MTMR3	0	genome.wustl.edu	37	22	30416172	30416172	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	22	30416172	30416172	G	A	SNP	MTMR3	ENST00000401950	human	ensembl	74_37	+1	known	missense	c.2524	p.V842M	0.000	NULL	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Tyr_Pase_cat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	MTMR3	HGNC	ENSG00000100330	tier1	rs199966820	-	54	0	0.00	63	14	18.18
MUC19	0	genome.wustl.edu	37	12	40840291	40840291	+	Silent	SNP	T	T	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	40840291	40840291	T	A	SNP	MUC19	ENST00000454784	human	ensembl	74_37	+1	novel	silent	c.2985	p.G995	0.997	superfamily_TIL_dom	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich	-	no_errors	MUC19	HGNC	ENSG00000205592	tier1	-	-	36	0	0.00	16	24	60.00
MUC19	0	genome.wustl.edu	37	12	40921494	40921494	+	RNA	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	40921494	40921494	T	C	SNP	MUC19	ENST00000474954	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MUC19	HGNC	ENSG00000205592	tier1	-	-	19	0	0.00	23	21	47.73
MUC4	0	genome.wustl.edu	37	3	195509509	195509509	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	195509509	195509509	T	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.8942	p.D2981V	0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	-	-	178	0	0.00	215	16	6.87
MYB	0	genome.wustl.edu	37	6	135539052	135539052	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	135539052	135539052	G	C	SNP	MYB	ENST00000341911	human	ensembl	74_37	+1	known	missense	c.2220	p.Q740H	1.000	NULL	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYB	HGNC	ENSG00000118513	tier1	-	-	58	0	0.00	55	457	89.08
MYB	0	genome.wustl.edu	37	6	135539249	135539249	+	RNA	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	135539249	135539249	G	A	SNP	MYB	ENST00000531845	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MYB	HGNC	ENSG00000118513	tier1	-	-	31	0	0.00	50	366	87.77
MYB	0	genome.wustl.edu	37	6	135539839	135539839	+	RNA	SNP	G	G	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	135539839	135539839	G	C	SNP	MYB	ENST00000531845	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.737	-	-	-	no_errors	MYB	HGNC	ENSG00000118513	tier1	-	-	14	0	0.00	24	106	81.54
MYB	0	genome.wustl.edu	37	6	135540214	135540214	+	RNA	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	135540214	135540214	G	A	SNP	MYB	ENST00000531845	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	MYB	HGNC	ENSG00000118513	tier1	-	-	56	0	0.00	89	679	88.41
NBEAL2	0	genome.wustl.edu	37	3	47040460	47040460	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	47040460	47040460	G	A	SNP	NBEAL2	ENST00000450053	human	ensembl	74_37	+1	known	silent	c.3396	p.A1132	0.000	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL2	HGNC	ENSG00000160796	tier1	-	-	84	0	0.00	99	9	8.33
NCOA3	0	genome.wustl.edu	37	20	46279857	46279857	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	20	46279857	46279857	G	A	SNP	NCOA3	ENST00000371998	human	ensembl	74_37	+1	known	silent	c.3783	p.Q1261	0.971	pirsf_Nuclear_rcpt_coactivator	pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_SRC-1,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA3	HGNC	ENSG00000124151				62	0	0.00	104	11	9.57
NEDD9	0	genome.wustl.edu	37	6	11185638	11185638	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	11185638	11185638	G	T	SNP	NEDD9	ENST00000379446	human	ensembl	74_37	-1	known	missense	c.2262	p.H754Q	1.000	pfam_CAS_DUF3513	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	NEDD9	HGNC	ENSG00000111859	tier1	-	-	57	0	0.00	24	13	35.14
NETO2	0	genome.wustl.edu	37	16	47117434	47117434	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	16	47117434	47117434	G	A	SNP	NETO2	ENST00000562435	human	ensembl	74_37	-1	known	missense	c.1276	p.R426W	1.000	NULL	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt	-	no_errors	NETO2	HGNC	ENSG00000171208	tier1	-	-	40	0	0.00	51	9	15.00
NFATC3	0	genome.wustl.edu	37	16	68260696	68260696	+	RNA	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	16	68260696	68260696	T	G	SNP	NFATC3	ENST00000535127	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.789	-	-	-	no_errors	NFATC3	HGNC	ENSG00000072736	tier1	-	-	63	0	0.00	62	4	6.06
NLRP3	0	genome.wustl.edu	37	1	247588567	247588567	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	247588567	247588567	C	A	SNP	NLRP3	ENST00000336119	human	ensembl	74_37	+1	known	missense	c.1822	p.L608M	0.934	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP3	HGNC	ENSG00000162711	tier1	-	-	46	0	0.00	48	16	25.00
NNMT	0	genome.wustl.edu	37	11	114183177	114183177	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	114183177	114183177	G	C	SNP	NNMT	ENST00000299964	human	ensembl	74_37	+1	known	missense	c.773	p.R258T	0.157	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	-	no_errors	NNMT	HGNC	ENSG00000166741	tier1	-	-	36	0	0.00	27	20	42.55
NOL9	0	genome.wustl.edu	37	1	6592771	6592771	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	6592771	6592771	G	T	SNP	NOL9	ENST00000377705	human	ensembl	74_37	-1	known	missense	c.1287	p.S429R	0.998	pfam_Pre-mRNA_cleavage_cplxII_Clp1,superfamily_P-loop_NTPase	pfam_Pre-mRNA_cleavage_cplxII_Clp1,superfamily_P-loop_NTPase	-	no_errors	NOL9	HGNC	ENSG00000162408				42	0	0.00	43	3	6.52
NPY2R	0	genome.wustl.edu	37	4	156136005	156136005	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	156136005	156136005	T	G	SNP	NPY2R	ENST00000329476	human	ensembl	74_37	+1	known	missense	c.914	p.L305R	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NPY2_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_NPY2_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NPFF_rcpt	-	no_errors	NPY2R	HGNC	ENSG00000185149	tier1	-	-	37	0	0.00	33	7	17.07
NRCAM	0	genome.wustl.edu	37	7	107830095	107830095	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	7	107830095	107830095	T	C	SNP	NRCAM	ENST00000379028	human	ensembl	74_37	-1	known	missense	c.2029	p.I677V	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NRCAM	HGNC	ENSG00000091129	tier1	-	-	30	0	0.00	17	17	50.00
NTRK3	0	genome.wustl.edu	37	15	88522553	88522553	+	RNA	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	15	88522553	88522553	A	C	SNP	NTRK3	ENST00000558306	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.996	-	-	-	no_errors	NTRK3	HGNC	ENSG00000140538	tier1	-	-	31	0	0.00	20	11	35.48
NTRK3	0	genome.wustl.edu	37	15	88799249	88799249	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	15	88799249	88799249	G	A	SNP	NTRK3	ENST00000360948	human	ensembl	74_37	-1	known	missense	c.136	p.R46W	1.000	pfam_LRR-contain_N,smart_LRR-contain_N	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_LRR-contain_N,superfamily_Kinase-like_dom,smart_LRR-contain_N,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Tyr_kinase_NGF_rcpt,prints_Tyr_kin_neurotrophic_rcpt_3,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NTRK3	HGNC	ENSG00000140538				58	0	0.00	67	4	5.56
OR10G9	0	genome.wustl.edu	37	11	123894160	123894160	+	Silent	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	123894160	123894160	T	G	SNP	OR10G9	ENST00000375024	human	ensembl	74_37	+1	known	silent	c.441	p.T147	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G9	HGNC	ENSG00000236981	tier1	-	-	91	0	0.00	123	15	10.87
OR2J1	0	genome.wustl.edu	37	6	29068844	29068844	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	29068844	29068844	G	C	SNP	OR2J1	ENST00000377171	human	ensembl	74_37	+1	known	missense	c.125	p.G42A	0.017	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR2J1	HGNC	ENSG00000204702	tier1	-	-	75	0	0.00	99	7	6.54
OR4C15	0	genome.wustl.edu	37	11	55322473	55322473	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	55322473	55322473	A	C	SNP	OR4C15	ENST00000314644	human	ensembl	74_37	+1	known	missense	c.691	p.M231L	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C15	HGNC	ENSG00000181939	tier1	-	-	50	0	0.00	49	10	16.67
OR4N2	0	genome.wustl.edu	37	14	20295732	20295732	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	14	20295732	20295732	A	C	SNP	OR4N2	ENST00000315947	human	ensembl	74_37	+1	known	missense	c.125	p.N42T	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4N2	HGNC	ENSG00000176294	tier1	-	-	88	0	0.00	68	22	24.44
OR5D18	0	genome.wustl.edu	37	11	55587684	55587684	+	Silent	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	55587684	55587684	T	G	SNP	OR5D18	ENST00000333976	human	ensembl	74_37	+1	known	silent	c.579	p.T193	0.002	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D18	HGNC	ENSG00000186119	tier1	-	-	60	0	0.00	72	17	19.10
OR5K3	0	genome.wustl.edu	37	3	98110010	98110010	+	Silent	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	98110010	98110010	T	C	SNP	OR5K3	ENST00000383695	human	ensembl	74_37	+1	known	silent	c.501	p.T167	0.061	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5K3	HGNC	ENSG00000206536	tier1	-	-	75	0	0.00	71	48	40.34
OR5L2	0	genome.wustl.edu	37	11	55594761	55594761	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	55594761	55594761	T	G	SNP	OR5L2	ENST00000378397	human	ensembl	74_37	+1	known	missense	c.67	p.L23V	0.003	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5L2	HGNC	ENSG00000205030	tier1	-	-	72	0	0.00	54	37	40.22
OR5T2	0	genome.wustl.edu	37	11	55999981	55999981	+	Silent	SNP	A	A	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	55999981	55999981	A	G	SNP	OR5T2	ENST00000313264	human	ensembl	74_37	-1	known	silent	c.681	p.S227	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5T2	HGNC	ENSG00000181718	tier1	-	-	63	0	0.00	91	13	12.50
OR6M1	0	genome.wustl.edu	37	11	123676607	123676607	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	123676607	123676607	A	T	SNP	OR6M1	ENST00000309154	human	ensembl	74_37	-1	known	missense	c.451	p.F151I	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6M1	HGNC	ENSG00000196099				26	0	0.00	34	5	12.82
OR8G1	0	genome.wustl.edu	37	11	124120732	124120732	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	124120732	124120732	T	C	SNP	OR8G1	ENST00000341493	human	ensembl	74_37	+1	known	missense	c.310	p.F104L	0.658	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8G1	HGNC	ENSG00000197849	tier1	-	-	123	0	0.00	144	26	15.29
PABPC4L	0	genome.wustl.edu	37	4	135121457	135121457	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	135121457	135121457	G	A	SNP	PABPC4L	ENST00000529122	human	ensembl	74_37	-1	known	missense	c.892	p.H298Y	1.000	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC4L	HGNC	ENSG00000254535	tier1	-	-	38	0	0.00	32	10	23.81
PCDH11X	0	genome.wustl.edu	37	X	91131912	91131912	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	91131912	91131912	G	T	SNP	PCDH11X	ENST00000373094	human	ensembl	74_37	+1	known	missense	c.673	p.G225C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11X	HGNC	ENSG00000102290	tier1	-	-	83	0	0.00	94	6	6.00
PCDHB3	0	genome.wustl.edu	37	5	140482358	140482358	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	140482358	140482358	G	A	SNP	PCDHB3	ENST00000231130	human	ensembl	74_37	+1	known	missense	c.2125	p.V709M	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB3	HGNC	ENSG00000113205	tier1	-	-	179	0	0.00	158	21	11.73
PCDHGA11	0	genome.wustl.edu	37	5	140801036	140801036	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	140801036	140801036	G	A	SNP	PCDHGA11	ENST00000398587	human	ensembl	74_37	+1	known	missense	c.242	p.R81Q	0.391	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA11	HGNC	ENSG00000253873				46	0	0.00	50	4	7.41
PCDHGA4	0	genome.wustl.edu	37	5	140734992	140734992	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	140734992	140734992	C	T	SNP	PCDHGA4	ENST00000571252	human	ensembl	74_37	+1	known	silent	c.225	p.F75	0.959	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA4	HGNC	ENSG00000262576				62	0	0.00	41	3	6.82
PCDHGA6	0	genome.wustl.edu	37	5	140755574	140755574	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	140755574	140755574	C	A	SNP	PCDHGA6	ENST00000517434	human	ensembl	74_37	+1	known	missense	c.1924	p.L642I	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA6	HGNC	ENSG00000253731	tier1	-	-	118	0	0.00	143	12	7.74
PCDHGB6	0	genome.wustl.edu	37	5	140788505	140788505	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	140788505	140788505	G	A	SNP	PCDHGB6	ENST00000520790	human	ensembl	74_37	+1	known	missense	c.736	p.E246K	0.018	superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB6	HGNC	ENSG00000253305				13	0	0.00	22	3	12.00
PDE8B	0	genome.wustl.edu	37	5	76696107	76696107	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	76696107	76696107	C	A	SNP	PDE8B	ENST00000264917	human	ensembl	74_37	+1	known	missense	c.1202	p.S401Y	1.000	NULL	pfam_PDEase_catalytic_dom,pfam_PDEase_PDE8,pfam_Sig_transdc_resp-reg_receiver,pfam_PAS_fold,pfam_PAS_4,pfam_PAS_fold_3,superfamily_PAS,superfamily_CheY-like_superfamily,smart_PAS,smart_HD/PDEase_dom,pfscan_PAS,prints_PDEase,tigrfam_PAS	-	no_errors	PDE8B	HGNC	ENSG00000113231	tier1	-	-	37	0	0.00	32	13	28.89
PDGFD	0	genome.wustl.edu	37	11	103870968	103870968	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	103870968	103870968	G	T	SNP	PDGFD	ENST00000393158	human	ensembl	74_37	-1	known	missense	c.140	p.T47K	1.000	NULL	pfam_CUB_dom,pfam_PDGF/VEGF_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_PDGF/VEGF_dom	-	no_errors	PDGFD	HGNC	ENSG00000170962	tier1	-	-	54	0	0.00	55	22	28.57
PDGFRB	0	genome.wustl.edu	37	5	149504349	149504349	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	149504349	149504349	G	A	SNP	PDGFRB	ENST00000261799	human	ensembl	74_37	-1	known	missense	c.1853	p.T618M	1.000	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	PDGFRB	HGNC	ENSG00000113721	tier1	-	-	36	0	0.00	17	14	45.16
PDHA2	0	genome.wustl.edu	37	4	96761425	96761425	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	96761425	96761425	T	G	SNP	PDHA2	ENST00000295266	human	ensembl	74_37	+1	known	missense	c.124	p.Y42D	0.000	NULL	pfam_DH_E1,tigrfam_Pyrv_DH_E1_asu_subgrp-y	-	no_errors	PDHA2	HGNC	ENSG00000163114	tier1	-	-	48	0	0.00	38	16	29.63
PGK1	0	genome.wustl.edu	37	X	77381499	77381499	+	RNA	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	77381499	77381499	C	T	SNP	PGK1	ENST00000476531	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.032	-	-	-	no_errors	PGK1	HGNC	ENSG00000102144	tier1	-	-	39	0	0.00	46	4	8.00
PHF21A	0	genome.wustl.edu	37	11	46001444	46001444	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	46001444	46001444	G	A	SNP	PHF21A	ENST00000257821	human	ensembl	74_37	-1	known	missense	c.227	p.P76L	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF21A	HGNC	ENSG00000135365	tier1	-	-	260	0	0.00	239	143	37.34
PIEZO2	0	genome.wustl.edu	37	18	10784843	10784843	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	18	10784843	10784843	G	A	SNP	PIEZO2	ENST00000582913	human	ensembl	74_37	-1	known	missense	c.2431	p.R811W	0.976	NULL	NULL	-	no_errors	PIEZO2	HGNC	ENSG00000154864	tier1	-	-	84	0	0.00	138	8	5.48
PIGQ	0	genome.wustl.edu	37	16	626145	626145	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	16	626145	626145	C	T	SNP	PIGQ	ENST00000026218	human	ensembl	74_37	+1	known	missense	c.833	p.T278M	0.408	pfam_GlcNAc_Gpi1	pfam_GlcNAc_Gpi1	-	no_errors	PIGQ	HGNC	ENSG00000007541	tier1	-	-	22	0	0.00	15	4	21.05
PIK3CA	0	genome.wustl.edu	37	3	178947851	178947851	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	178947851	178947851	T	G	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.2726	p.F909C	1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	tier1	-	-	70	0	0.00	99	21	17.50
PIWIL2	0	genome.wustl.edu	37	8	22167540	22167540	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	22167540	22167540	G	A	SNP	PIWIL2	ENST00000356766	human	ensembl	74_37	+1	known	missense	c.1753	p.E585K	1.000	superfamily_RNaseH-like_dom	pfam_Piwi,pfam_PAZ_dom,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	PIWIL2	HGNC	ENSG00000197181	tier1	-	-	26	0	0.00	32	17	34.69
PKHD1	0	genome.wustl.edu	37	6	51935814	51935814	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	51935814	51935814	G	A	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	silent	c.657	p.G219	0.853	NULL	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927				17	0	0.00	30	3	9.09
PLCG1	0	genome.wustl.edu	37	20	39794968	39794968	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	20	39794968	39794968	G	A	SNP	PLCG1	ENST00000244007	human	ensembl	74_37	+1	known	missense	c.1934	p.R645H	1.000	superfamily_PLC-like_Pdiesterase_TIM-brl,smart_Pleckstrin_homology,smart_SH2,pirsf_PLC-gamma,pfscan_SH2	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_Pleckstrin_homology,pfam_C2_dom,pfam_SH3_domain,pfam_SH3_2,pfam_PLipase_C_EF-hand-like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pirsf_PLC-gamma,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2	-	no_errors	PLCG1	HGNC	ENSG00000124181	tier1	-	-	39	0	0.00	38	39	50.65
PLS3	0	genome.wustl.edu	37	X	114863595	114863595	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	114863595	114863595	G	T	SNP	PLS3	ENST00000355899	human	ensembl	74_37	+1	known	missense	c.323	p.G108V	1.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_EF_hand_dom,smart_CH-domain,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	PLS3	HGNC	ENSG00000102024	tier1	-	-	38	0	0.00	40	14	25.93
PLXNB3	0	genome.wustl.edu	37	X	153039000	153039000	+	Silent	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	153039000	153039000	C	A	SNP	PLXNB3	ENST00000538966	human	ensembl	74_37	+1	known	silent	c.3180	p.G1060	0.913	superfamily_Ig_E-set,smart_IPT	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Plexin_repeat,pfam_Semap_dom,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB3	HGNC	ENSG00000198753	tier1	-	-	9	0	0.00	7	12	63.16
PNLIPRP3	0	genome.wustl.edu	37	10	118236293	118236293	+	Silent	SNP	A	A	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	10	118236293	118236293	A	G	SNP	PNLIPRP3	ENST00000369230	human	ensembl	74_37	+1	known	silent	c.1302	p.A434	1.000	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,pirsf_Lipoprotein_lipase_LIPH	pfam_Lipase_N,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,pirsf_Lipoprotein_lipase_LIPH,prints_Lipase,prints_Lipase_panc	-	no_errors	PNLIPRP3	HGNC	ENSG00000203837	tier1	-	-	51	0	0.00	41	17	29.31
PNMAL2	0	genome.wustl.edu	37	19	46998401	46998401	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	46998401	46998401	G	A	SNP	PNMAL2	ENST00000599531	human	ensembl	74_37	-1	known	missense	c.322	p.R108C	0.002	NULL	NULL	-	no_errors	PNMAL2	HGNC	ENSG00000204851	tier1	-	-	47	0	0.00	30	17	36.17
PNMT	0	genome.wustl.edu	37	17	37826276	37826276	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	37826276	37826276	G	A	SNP	PNMT	ENST00000269582	human	ensembl	74_37	+1	known	silent	c.483	p.Q161	1.000	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	-	no_errors	PNMT	HGNC	ENSG00000141744	tier1	-	-	43	0	0.00	374	294	43.95
POLE	0	genome.wustl.edu	37	12	133219838	133219838	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	133219838	133219838	C	T	SNP	POLE	ENST00000320574	human	ensembl	74_37	-1	known	missense	c.4523	p.R1508H	1.000	NULL	pfam_DNA_pol_e_suA_C,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	-	no_errors	POLE	HGNC	ENSG00000177084	tier1	rs142508245	-	8	0	0.00	6	9	60.00
PPP1R37	0	genome.wustl.edu	37	19	45649041	45649041	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	45649041	45649041	G	A	SNP	PPP1R37	ENST00000221462	human	ensembl	74_37	+1	known	missense	c.1727	p.S576N	1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	PPP1R37	HGNC	ENSG00000104866	tier1	-	-	19	0	0.00	9	7	43.75
PPP1R42	0	genome.wustl.edu	37	8	67926793	67926793	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	67926793	67926793	A	G	SNP	PPP1R42	ENST00000522909	human	ensembl	74_37	-1	known	missense	c.164	p.L55S	1.000	NULL	pfam_Leu-rich_rpt	-	no_errors	PPP1R42	HGNC	ENSG00000178125				14	0	0.00	43	6	12.24
PPP4R1	0	genome.wustl.edu	37	18	9595065	9595065	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	18	9595065	9595065	G	T	SNP	PPP4R1	ENST00000400556	human	ensembl	74_37	-1	known	missense	c.139	p.P47T	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP4R1	HGNC	ENSG00000154845	tier1	-	-	47	0	0.00	52	6	10.34
PRAMEF11	0	genome.wustl.edu	37	1	12888666	12888666	+	Splice_Site	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	12888666	12888666	T	G	SNP	PRAMEF11	ENST00000535591	human	ensembl	74_37	-1	known	splice_site	c.1-2	e1-2	0.000	-	-	-	no_errors	PRAMEF11	HGNC	ENSG00000204513	tier1	-	-	284	0	0.00	247	38	13.33
PRB3	0	genome.wustl.edu	37	12	11420304	11420304	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	11420304	11420304	G	A	SNP	PRB3	ENST00000381842	human	ensembl	74_37	-1	known	missense	c.752	p.P251L	0.335	NULL	NULL	-	no_errors	PRB3	HGNC	ENSG00000197870	tier1	-	-	140	0	0.00	168	12	6.67
PRDM13	0	genome.wustl.edu	37	6	100060981	100060981	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	100060981	100060981	G	A	SNP	PRDM13	ENST00000369215	human	ensembl	74_37	+1	known	missense	c.470	p.R157H	0.999	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM13	HGNC	ENSG00000112238	tier1	-	-	40	0	0.00	61	7	10.29
PRL	0	genome.wustl.edu	37	6	22292815	22292815	+	Silent	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	22292815	22292815	A	C	SNP	PRL	ENST00000306482	human	ensembl	74_37	-1	known	silent	c.264	p.T88	0.172	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	PRL	HGNC	ENSG00000172179	tier1	-	-	79	0	0.00	125	14	10.07
PRSS1	0	genome.wustl.edu	37	7	142459717	142459717	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	7	142459717	142459717	A	G	SNP	PRSS1	ENST00000311737	human	ensembl	74_37	+1	known	missense	c.293	p.Q98R	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS1	HGNC	ENSG00000204983	tier1	-	-	95	0	0.00	73	7	8.75
PTCHD2	0	genome.wustl.edu	37	1	11562884	11562884	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	11562884	11562884	G	A	SNP	PTCHD2	ENST00000294484	human	ensembl	74_37	+1	known	missense	c.1246	p.E416K	1.000	pfam_Patched	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	-	no_errors	PTCHD2	HGNC	ENSG00000204624	tier1	-	-	67	0	0.00	50	8	13.79
PXDN	0	genome.wustl.edu	37	2	1652615	1652615	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	1652615	1652615	G	A	SNP	PXDN	ENST00000252804	human	ensembl	74_37	-1	known	silent	c.2937	p.N979	0.996	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,prints_Haem_peroxidase_animal_subgr,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDN	HGNC	ENSG00000130508				23	0	0.00	24	6	20.00
PXDNL	0	genome.wustl.edu	37	8	52320958	52320958	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	52320958	52320958	C	T	SNP	PXDNL	ENST00000356297	human	ensembl	74_37	-1	known	missense	c.3226	p.E1076K	0.989	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDNL	HGNC	ENSG00000147485	tier1	-	-	38	0	0.00	30	9	23.08
RAPGEF3	0	genome.wustl.edu	37	12	48142277	48142277	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	48142277	48142277	C	T	SNP	RAPGEF3	ENST00000389212	human	ensembl	74_37	-1	known	silent	c.1203	p.L401	1.000	pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_cNMP-bd_dom,pfam_DEP_dom,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_cNMP-bd-like,smart_DEP_dom,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_DEP_dom,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_cAMP/cGMP_kin	-	no_errors	RAPGEF3	HGNC	ENSG00000079337	tier1	-	-	20	0	0.00	6	9	60.00
RBM3	0	genome.wustl.edu	37	X	48433656	48433656	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	48433656	48433656	G	A	SNP	RBM3	ENST00000376755	human	ensembl	74_37	+1	known	missense	c.88	p.G30R	0.840	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM3	HGNC	ENSG00000102317				39	0	0.00	49	5	9.26
RBMXL3	0	genome.wustl.edu	37	X	114426992	114426992	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	114426992	114426992	C	T	SNP	RBMXL3	ENST00000424776	human	ensembl	74_37	+1	known	silent	c.2988	p.G996	0.066	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMXL3	HGNC	ENSG00000175718	tier1	-	-	47	0	0.00	49	36	42.35
RECQL4	0	genome.wustl.edu	37	8	145739686	145739686	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	145739686	145739686	C	T	SNP	RECQL4	ENST00000428558	human	ensembl	74_37	-1	known	missense	c.1765	p.G589S	0.005	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd,tigrfam_DNA_helicase_ATP-dep_RecQ	pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DNA_rep_checkpnt_protein,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL4	HGNC	ENSG00000160957	tier1	-	-	29	0	0.00	46	8	14.81
RGPD3	0	genome.wustl.edu	37	2	107049690	107049690	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	107049690	107049690	C	T	SNP	RGPD3	ENST00000304514	human	ensembl	74_37	-1	known	missense	c.2257	p.E753K	1.000	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD3	HGNC	ENSG00000153165	tier1	-	-	219	0	0.00	277	16	5.46
RGS20	0	genome.wustl.edu	37	8	54791923	54791923	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	54791923	54791923	C	T	SNP	RGS20	ENST00000297313	human	ensembl	74_37	+1	known	missense	c.271	p.R91W	0.895	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS20	HGNC	ENSG00000147509				41	0	0.00	50	4	7.27
RGS6	0	genome.wustl.edu	37	14	73029207	73029207	+	RNA	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	14	73029207	73029207	C	A	SNP	RGS6	ENST00000554300	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.003	-	-	-	no_errors	RGS6	HGNC	ENSG00000182732	tier1	-	-	21	0	0.00	8	15	65.22
RGSL1	0	genome.wustl.edu	37	1	182443459	182443459	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	182443459	182443459	G	A	SNP	RGSL1	ENST00000294854	human	ensembl	74_37	+1	known	missense	c.1213	p.D405N	1.000	superfamily_Regulat_G_prot_signal_superfam	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam	-	no_errors	RGSL1	HGNC	ENSG00000121446	tier1	-	-	22	0	0.00	26	11	29.73
ROBO2	0	genome.wustl.edu	37	3	77542488	77542488	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	77542488	77542488	C	A	SNP	ROBO2	ENST00000461745	human	ensembl	74_37	+1	known	missense	c.761	p.P254Q	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO2	HGNC	ENSG00000185008	tier1	-	-	26	0	0.00	27	13	32.50
RP1L1	0	genome.wustl.edu	37	8	10466111	10466111	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	10466111	10466111	C	T	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	missense	c.5497	p.E1833K	0.000	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638	tier1	-	-	70	0	0.00	97	10	9.26
RPS10	0	genome.wustl.edu	37	6	34389563	34389563	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	34389563	34389563	G	A	SNP	RPS10	ENST00000326199	human	ensembl	74_37	-1	known	missense	c.344	p.A115V	1.000	NULL	pfam_S10_plectin_N	-	no_errors	RPS10	HGNC	ENSG00000124614	tier1	-	-	56	0	0.00	65	42	39.25
RTL1	0	genome.wustl.edu	37	14	101347476	101347476	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	14	101347476	101347476	T	G	SNP	RTL1	ENST00000534062	human	ensembl	74_37	-1	known	missense	c.3650	p.N1217T	0.000	NULL	pfam_Retrotrans_gag_dom,superfamily_Peptidase_aspartic_dom	-	no_errors	RTL1	HGNC	ENSG00000254656	tier1	-	-	56	0	0.00	16	7	30.43
RYR2	0	genome.wustl.edu	37	1	237865317	237865317	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	237865317	237865317	G	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.9401	p.S3134N	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	38	0	0.00	28	12	30.00
SAFB	0	genome.wustl.edu	37	19	5641936	5641936	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	5641936	5641936	G	A	SNP	SAFB	ENST00000588852	human	ensembl	74_37	+1	known	silent	c.525	p.P175	0.364	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SAFB	HGNC	ENSG00000160633	tier1	-	-	23	0	0.00	34	11	24.44
SAMD9	0	genome.wustl.edu	37	7	92734538	92734538	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	7	92734538	92734538	T	G	SNP	SAMD9	ENST00000379958	human	ensembl	74_37	-1	known	missense	c.873	p.E291D	0.999	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413				22	0	0.00	64	7	9.86
SCML2	0	genome.wustl.edu	37	X	18264857	18264857	+	Nonsense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	18264857	18264857	A	C	SNP	SCML2	ENST00000251900	human	ensembl	74_37	-1	known	nonsense	c.1662	p.Y554*	0.000	NULL	pfam_Mbt,pfam_DUF3588,pfam_SAM_type1,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt	-	no_errors	SCML2	HGNC	ENSG00000102098	tier1	-	-	32	0	0.00	44	24	35.29
SCN3A	0	genome.wustl.edu	37	2	165994580	165994580	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	165994580	165994580	C	A	SNP	SCN3A	ENST00000283254	human	ensembl	74_37	-1	known	missense	c.2200	p.A734S	1.000	NULL	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN3A	HGNC	ENSG00000153253	tier1	-	-	57	0	0.00	46	6	11.54
SCN4A	0	genome.wustl.edu	37	17	62018150	62018150	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	62018150	62018150	A	T	SNP	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	missense	c.5492	p.V1831D	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN4A	HGNC	ENSG00000007314	tier1	-	-	47	0	0.00	24	26	52.00
SCUBE1	0	genome.wustl.edu	37	22	43606144	43606144	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	22	43606144	43606144	G	A	SNP	SCUBE1	ENST00000360835	human	ensembl	74_37	-1	known	missense	c.2486	p.A829V	0.961	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_EGF-like_Ca-bd_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	SCUBE1	HGNC	ENSG00000159307	tier1	-	-	57	0	0.00	45	19	29.23
SDHAP1	0	genome.wustl.edu	37	3	195702747	195702747	+	RNA	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	195702747	195702747	G	A	SNP	SDHAP1	ENST00000427841	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	SDHAP1	HGNC	ENSG00000185485				80	0	0.00	100	8	7.41
SEC13	0	genome.wustl.edu	37	3	10354308	10354308	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	10354308	10354308	C	T	SNP	SEC13	ENST00000350697	human	ensembl	74_37	-1	known	missense	c.271	p.G91S	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC13	HGNC	ENSG00000157020	tier1	rs137884718	-	35	0	0.00	17	10	37.04
SEMA6D	0	genome.wustl.edu	37	15	48063701	48063701	+	Silent	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	15	48063701	48063701	T	C	SNP	SEMA6D	ENST00000316364	human	ensembl	74_37	+1	known	silent	c.2941	p.L981	1.000	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6D	HGNC	ENSG00000137872	tier1	-	-	35	0	0.00	24	18	42.86
SFRP1	0	genome.wustl.edu	37	8	41122735	41122735	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	41122735	41122735	T	G	SNP	SFRP1	ENST00000220772	human	ensembl	74_37	-1	known	missense	c.896	p.K299T	1.000	pfam_Netrin_module_non-TIMP,superfamily_TIMP-like_OB-fold,smart_Netrin_module_non-TIMP,pfscan_Netrin_domain	pfam_Frizzled_dom,pfam_Netrin_module_non-TIMP,superfamily_Frizzled_dom,superfamily_TIMP-like_OB-fold,smart_Frizzled_dom,smart_Netrin_module_non-TIMP,pfscan_Frizzled_dom,pfscan_Netrin_domain	-	no_errors	SFRP1	HGNC	ENSG00000104332	tier1	-	-	62	0	0.00	68	13	16.05
SFTPA1	0	genome.wustl.edu	37	10	81373718	81373718	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	10	81373718	81373718	G	C	SNP	SFTPA1	ENST00000419470	human	ensembl	74_37	+1	known	missense	c.641	p.R214P	0.004	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	SFTPA1	HGNC	ENSG00000122852	tier1	-	-	59	0	0.00	41	16	28.07
SIGLEC5	0	genome.wustl.edu	37	19	52130727	52130727	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	52130727	52130727	G	T	SNP	SIGLEC5	ENST00000222107	human	ensembl	74_37	-1	known	missense	c.1270	p.L424M	0.222	NULL	pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC5	HGNC	ENSG00000105501	tier1	-	-	78	0	0.00	60	42	41.18
SLC25A44	0	genome.wustl.edu	37	1	156180848	156180851	+	RNA	DEL	TGTG	TGTG	-			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	TGTG	TGTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	156180848	156180851	TGTG	-	DEL	SLC25A44	ENST00000469537	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.000:0.001	-	-	-	no_errors	SLC25A44	HGNC	ENSG00000160785	tier1			16	0	0.00	23	6	20.69
SLC39A12	0	genome.wustl.edu	37	10	18270308	18270308	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	10	18270308	18270308	A	T	SNP	SLC39A12	ENST00000377369	human	ensembl	74_37	+1	known	missense	c.992	p.E331V	1.000	NULL	pfam_ZIP	-	no_errors	SLC39A12	HGNC	ENSG00000148482	tier1	-	-	23	0	0.00	31	8	20.51
SLC45A1	0	genome.wustl.edu	37	1	8398028	8398028	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	8398028	8398028	G	A	SNP	SLC45A1	ENST00000377479	human	ensembl	74_37	+1	known	missense	c.1852	p.A618T	1.000	superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A1	HGNC	ENSG00000162426	tier1	-	-	43	0	0.00	51	10	16.39
SLC6A1	0	genome.wustl.edu	37	3	11067497	11067497	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	11067497	11067497	C	T	SNP	SLC6A1	ENST00000287766	human	ensembl	74_37	+1	known	silent	c.888	p.Y296	0.759	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_GABA_GAT1,pfscan_Na/ntran_symport	-	no_errors	SLC6A1	HGNC	ENSG00000157103	tier1	rs144034291	-	44	0	0.00	30	11	26.83
SLC8A1	0	genome.wustl.edu	37	2	40656365	40656365	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	40656365	40656365	T	A	SNP	SLC8A1	ENST00000332839	human	ensembl	74_37	-1	known	missense	c.1056	p.Q352H	0.968	pfscan_DnaJ_domain,tigrfam_Na_Ca_Ex	pfam_NaCa_Exmemb,pfam_Calx_beta,smart_Calx_beta,pfscan_DnaJ_domain,prints_Na_Ca_Ex,prints_NaCa_exhngr1,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A1	HGNC	ENSG00000183023	tier1	-	-	79	0	0.00	61	27	30.68
SLC9A6	0	genome.wustl.edu	37	X	135104757	135104757	+	Silent	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	135104757	135104757	T	C	SNP	SLC9A6	ENST00000370695	human	ensembl	74_37	+1	known	silent	c.1363	p.L455	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_6,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A6	HGNC	ENSG00000198689	tier1	-	-	39	0	0.00	56	7	11.11
SLCO3A1	0	genome.wustl.edu	37	15	92663743	92663743	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	15	92663743	92663743	G	T	SNP	SLCO3A1	ENST00000318445	human	ensembl	74_37	+1	known	missense	c.1058	p.C353F	1.000	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO3A1	HGNC	ENSG00000176463	tier1	-	-	47	0	0.00	36	24	40.00
SLIT3	0	genome.wustl.edu	37	5	168151436	168151436	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	168151436	168151436	C	T	SNP	SLIT3	ENST00000519560	human	ensembl	74_37	-1	known	missense	c.2324	p.R775Q	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_EG-like_dom,pfam_Leu-rich_rpt,pfam_Laminin_G,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT3	HGNC	ENSG00000184347	tier1	-	-	49	0	0.00	40	18	31.03
SLITRK1	0	genome.wustl.edu	37	13	84453910	84453910	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	13	84453910	84453910	C	A	SNP	SLITRK1	ENST00000377084	human	ensembl	74_37	-1	known	missense	c.1733	p.C578F	1.000	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK1	HGNC	ENSG00000178235	tier1	-	-	16	0	0.00	16	6	27.27
SLITRK2	0	genome.wustl.edu	37	X	144905711	144905711	+	Silent	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	144905711	144905711	T	C	SNP	SLITRK2	ENST00000370490	human	ensembl	74_37	+1	known	silent	c.1768	p.L590	0.036	NULL	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK2	HGNC	ENSG00000185985	tier1	-	-	27	0	0.00	18	23	56.10
SMC2	0	genome.wustl.edu	37	9	106864245	106864245	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	9	106864245	106864245	G	C	SNP	SMC2	ENST00000286398	human	ensembl	74_37	+1	known	missense	c.641	p.R214T	1.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,smart_SMC_hinge	-	no_errors	SMC2	HGNC	ENSG00000136824				30	0	0.00	24	2	7.69
SNX16	0	genome.wustl.edu	37	8	82727597	82727597	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	82727597	82727597	T	A	SNP	SNX16	ENST00000345957	human	ensembl	74_37	-1	known	missense	c.644	p.D215V	1.000	superfamily_Phox,pfscan_Phox	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX16	HGNC	ENSG00000104497				20	0	0.00	27	3	10.00
SPACA1	0	genome.wustl.edu	37	6	88768457	88768457	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	88768457	88768457	C	A	SNP	SPACA1	ENST00000237201	human	ensembl	74_37	+1	known	missense	c.391	p.L131I	0.967	NULL	NULL	-	no_errors	SPACA1	HGNC	ENSG00000118434	tier1	-	-	24	0	0.00	35	15	30.00
SPPL2C	0	genome.wustl.edu	37	17	43922683	43922683	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	43922683	43922683	G	A	SNP	SPPL2C	ENST00000329196	human	ensembl	74_37	+1	known	silent	c.411	p.Q137	0.286	pfam_Protease-assoc_domain	pfam_Peptidase_A22B_SPP,pfam_Protease-assoc_domain,smart_Preselin/SPP	-	no_errors	SPPL2C	HGNC	ENSG00000185294	tier1	-	-	49	0	0.00	42	59	58.42
SSX2IP	0	genome.wustl.edu	37	1	85136405	85136405	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	85136405	85136405	G	A	SNP	SSX2IP	ENST00000342203	human	ensembl	74_37	-1	known	missense	c.137	p.S46L	1.000	NULL	pfam_Afadin/alpha-actinin-bd	-	no_errors	SSX2IP	HGNC	ENSG00000117155	tier1	-	-	19	0	0.00	20	9	31.03
STAG2	0	genome.wustl.edu	37	X	123176428	123176428	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	123176428	123176428	C	A	SNP	STAG2	ENST00000218089	human	ensembl	74_37	+1	known	missense	c.395	p.T132K	1.000	NULL	pfam_STAG,superfamily_ARM-type_fold	-	no_errors	STAG2	HGNC	ENSG00000101972	tier1	-	-	75	0	0.00	49	7	12.50
STAG3L3	0	genome.wustl.edu	37	7	72440244	72440244	+	RNA	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	7	72440244	72440244	G	A	SNP	STAG3L3	ENST00000436857	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	STAG3L3	HGNC	ENSG00000174353	tier1	-	-	59	0	0.00	64	43	39.81
STARD8	0	genome.wustl.edu	37	X	67942429	67942429	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	67942429	67942429	C	T	SNP	STARD8	ENST00000374599	human	ensembl	74_37	+1	known	missense	c.2740	p.R914C	0.997	pfam_START_lipid-bd_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	STARD8	HGNC	ENSG00000130052	tier1	rs139291119	-	79	0	0.00	91	7	7.14
STIP1	0	genome.wustl.edu	37	11	63970376	63970376	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	63970376	63970376	C	T	SNP	STIP1	ENST00000305218	human	ensembl	74_37	+1	known	missense	c.1274	p.P425L	1.000	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,smart_STI1_HS-bd,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	STIP1	HGNC	ENSG00000168439	tier1	-	-	66	0	0.00	74	9	10.71
STK32B	0	genome.wustl.edu	37	4	5053593	5053593	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	5053593	5053593	G	A	SNP	STK32B	ENST00000282908	human	ensembl	74_37	+1	known	missense	c.3	p.M1I	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK32B	HGNC	ENSG00000152953	tier1	-	-	67	0	0.00	27	13	32.50
STK38L	0	genome.wustl.edu	37	12	27472324	27472324	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	27472324	27472324	C	T	SNP	STK38L	ENST00000389032	human	ensembl	74_37	+1	known	silent	c.1143	p.P381	0.567	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	STK38L	HGNC	ENSG00000211455	tier1	-	-	42	0	0.00	50	5	9.09
SUCNR1	0	genome.wustl.edu	37	3	151599113	151599113	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	151599113	151599113	G	A	SNP	SUCNR1	ENST00000362032	human	ensembl	74_37	+1	known	missense	c.782	p.G261E	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	SUCNR1	HGNC	ENSG00000198829	tier1	-	-	83	0	0.00	120	24	16.67
SULF1	0	genome.wustl.edu	37	8	70476293	70476293	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	70476293	70476293	C	T	SNP	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	missense	c.83	p.P28L	0.143	pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573	tier1	-	-	81	0	0.00	122	19	13.38
SUMO1	0	genome.wustl.edu	37	2	203084799	203084799	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	203084799	203084799	C	-	DEL	SUMO1	ENST00000392245	human	ensembl	74_37	-1	known	frame_shift_del	c.43	p.D15fs	1.000	NULL	pfam_Rad60/SUMO_like,pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	SUMO1	HGNC	ENSG00000116030	tier1			51	0	0.00	51	21	29.17
TENM4	0	genome.wustl.edu	37	11	78565358	78565358	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	78565358	78565358	A	C	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	missense	c.1472	p.F491C	1.000	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256	tier1	-	-	33	0	0.00	26	3	10.34
TEX10	0	genome.wustl.edu	37	9	103108371	103108371	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	9	103108371	103108371	C	A	SNP	TEX10	ENST00000374902	human	ensembl	74_37	-1	known	missense	c.1120	p.D374Y	1.000	superfamily_ARM-type_fold	pfam_IPI1/TEX10,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	TEX10	HGNC	ENSG00000136891				30	0	0.00	35	2	5.41
TFAP2D	0	genome.wustl.edu	37	6	50696968	50696968	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	6	50696968	50696968	T	G	SNP	TFAP2D	ENST00000008391	human	ensembl	74_37	+1	known	missense	c.826	p.L276V	1.000	pfam_TF_AP2_C,prints_TF_AP2_C	pfam_TF_AP2_C,prints_TF_AP2_C	-	no_errors	TFAP2D	HGNC	ENSG00000008197				35	0	0.00	50	3	5.66
TGM5	0	genome.wustl.edu	37	15	43545067	43545067	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	15	43545067	43545067	T	C	SNP	TGM5	ENST00000220420	human	ensembl	74_37	-1	known	missense	c.752	p.N251S	0.878	NULL	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM5	HGNC	ENSG00000104055	tier1	-	-	18	0	0.00	24	8	25.00
TIAM1	0	genome.wustl.edu	37	21	32554886	32554886	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	21	32554886	32554886	A	T	SNP	TIAM1	ENST00000286827	human	ensembl	74_37	-1	known	missense	c.2739	p.D913E	0.997	pfam_PDZ,superfamily_PDZ,smart_PDZ	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Raf-like_ras-bd,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM1	HGNC	ENSG00000156299	tier1	-	-	72	0	0.00	38	11	22.45
TIMP1	0	genome.wustl.edu	37	X	47444888	47444888	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	47444888	47444888	C	A	SNP	TIMP1	ENST00000377018	human	ensembl	74_37	+1	known	missense	c.257	p.A86E	0.000	smart_Prot_inh_TIMP	pfam_Prot_inh_TIMP,superfamily_TIMP-like_OB-fold,smart_Prot_inh_TIMP	-	no_errors	TIMP1	HGNC	ENSG00000102265	tier1	-	-	64	0	0.00	52	18	25.71
TLE4	0	genome.wustl.edu	37	9	82335074	82335074	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	9	82335074	82335074	C	T	SNP	TLE4	ENST00000376520	human	ensembl	74_37	+1	known	silent	c.1800	p.R600	0.959	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Groucho_enhance	-	no_errors	TLE4	HGNC	ENSG00000106829	tier1	-	-	65	0	0.00	41	14	25.45
TLN2	0	genome.wustl.edu	37	15	63088404	63088404	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	15	63088404	63088404	G	A	SNP	TLN2	ENST00000306829	human	ensembl	74_37	+1	known	missense	c.5962	p.G1988R	1.000	NULL	pfam_Talin_cent,pfam_ILWEQ_dom,pfam_Vinculin-bd_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN2	HGNC	ENSG00000171914	tier1	-	-	42	0	0.00	72	7	8.86
TMED6	0	genome.wustl.edu	37	16	69385482	69385482	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	16	69385482	69385482	A	T	SNP	TMED6	ENST00000288025	human	ensembl	74_37	-1	known	missense	c.175	p.F59I	1.000	pfam_GOLD,superfamily_GOLD,pfscan_GOLD	pfam_GOLD,superfamily_GOLD,pfscan_GOLD	-	no_errors	TMED6	HGNC	ENSG00000157315	tier1	-	-	39	0	0.00	45	12	21.05
TMEM132D	0	genome.wustl.edu	37	12	129566348	129566348	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	129566348	129566348	C	G	SNP	TMEM132D	ENST00000422113	human	ensembl	74_37	-1	known	missense	c.1879	p.G627R	0.982	NULL	NULL	-	no_errors	TMEM132D	HGNC	ENSG00000151952	tier1	-	-	64	0	0.00	25	20	44.44
TMEM176B	0	genome.wustl.edu	37	7	150491085	150491085	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	7	150491085	150491085	C	T	SNP	TMEM176B	ENST00000326442	human	ensembl	74_37	-1	known	silent	c.279	p.L93	0.164	pfam_CD20-like,superfamily_MFS_dom_general_subst_transpt	pfam_CD20-like,superfamily_MFS_dom_general_subst_transpt	-	no_errors	TMEM176B	HGNC	ENSG00000106565	tier1	-	-	39	0	0.00	24	30	55.56
TMEM184C	0	genome.wustl.edu	37	4	148555367	148555367	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	148555367	148555367	C	T	SNP	TMEM184C	ENST00000296582	human	ensembl	74_37	+1	known	nonsense	c.1099	p.Q367*	0.177	NULL	pfam_Ost-alpha	-	no_errors	TMEM184C	HGNC	ENSG00000164168				16	0	0.00	24	3	11.11
TOPORS	0	genome.wustl.edu	37	9	32543529	32543529	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	9	32543529	32543529	C	T	SNP	TOPORS	ENST00000360538	human	ensembl	74_37	-1	known	missense	c.994	p.E332K	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	TOPORS	HGNC	ENSG00000197579				22	0	0.00	19	2	9.52
TP53	0	genome.wustl.edu	37	17	7578431	7578431	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	7578431	7578431	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	nonsense	c.499	p.Q167*	0.998	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	36	0	0.00	16	19	54.29
TRAF5	0	genome.wustl.edu	37	1	211545598	211545598	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	211545598	211545598	G	A	SNP	TRAF5	ENST00000261464	human	ensembl	74_37	+1	known	missense	c.1228	p.V410M	1.000	superfamily_TRAF-like,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH	pfam_MATH,superfamily_TRAF-like,smart_Znf_RING,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF5	HGNC	ENSG00000082512				44	0	0.00	47	3	6.00
TRIM42	0	genome.wustl.edu	37	3	140407130	140407130	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	140407130	140407130	A	G	SNP	TRIM42	ENST00000286349	human	ensembl	74_37	+1	known	missense	c.1606	p.S536G	1.000	NULL	pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Znf_B-box,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM42	HGNC	ENSG00000155890	tier1	-	-	27	0	0.00	36	7	16.28
TRIML2	0	genome.wustl.edu	37	4	189018248	189018248	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	189018248	189018248	T	C	SNP	TRIML2	ENST00000512729	human	ensembl	74_37	-1	known	missense	c.562	p.R188G	0.000	pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	-	no_errors	TRIML2	HGNC	ENSG00000179046	tier1	-	-	36	0	0.00	27	6	18.18
TRPS1	0	genome.wustl.edu	37	8	116430667	116430667	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	116430667	116430667	G	T	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	missense	c.2714	p.S905Y	0.996	smart_Znf_GATA,pfscan_Znf_GATA,prints_Znf_GATA	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447	tier1	-	-	17	0	0.00	29	14	32.56
TRPV3	0	genome.wustl.edu	37	17	3432156	3432156	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	3432156	3432156	G	A	SNP	TRPV3	ENST00000301365	human	ensembl	74_37	-1	known	missense	c.1376	p.S459L	0.999	prints_TRPV1-4_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel	-	no_errors	TRPV3	HGNC	ENSG00000167723				28	0	0.00	25	4	13.79
TRPV4	0	genome.wustl.edu	37	12	110252313	110252313	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	110252313	110252313	G	A	SNP	TRPV4	ENST00000261740	human	ensembl	74_37	-1	known	missense	c.289	p.P97S	1.000	prints_TRPV4_channel	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,prints_TRPV4_channel,tigrfam_TRP_channel	-	no_errors	TRPV4	HGNC	ENSG00000111199	tier1	-	-	43	0	0.00	25	35	58.33
TSPAN7	0	genome.wustl.edu	37	X	38515293	38515293	+	Silent	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	38515293	38515293	G	A	SNP	TSPAN7	ENST00000480976	human	ensembl	74_37	+1	known	silent	c.126	p.G42	0.006	NULL	NULL	-	no_errors	TSPAN7	HGNC	ENSG00000156298	tier1	-	-	16	0	0.00	16	9	36.00
TSSC1	0	genome.wustl.edu	37	2	3192879	3192879	+	RNA	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	3192879	3192879	G	A	SNP	TSSC1	ENST00000478754	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	TSSC1	HGNC	ENSG00000032389	tier1	-	-	11	0	0.00	4	7	63.64
TSSK2	0	genome.wustl.edu	37	22	19119927	19119927	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	22	19119927	19119927	G	A	SNP	TSSK2	ENST00000399635	human	ensembl	74_37	+1	known	missense	c.1015	p.E339K	0.885	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TSSK2	HGNC	ENSG00000206203				14	0	0.00	12	5	29.41
TTC28	0	genome.wustl.edu	37	22	28379105	28379105	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	22	28379105	28379105	C	T	SNP	TTC28	ENST00000397906	human	ensembl	74_37	-1	novel	missense	c.6550	p.G2184S	0.362	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC28	HGNC	ENSG00000100154	tier1	-	-	62	0	0.00	49	16	24.62
TTN	0	genome.wustl.edu	37	2	179454489	179454489	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	179454489	179454489	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.54259	p.E18087K	1.000	superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	72	0	0.00	63	18	22.22
TTN	0	genome.wustl.edu	37	2	179596509	179596509	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	2	179596509	179596509	T	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.13361	p.K4454R	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	38	0	0.00	37	7	15.91
TTPAL	0	genome.wustl.edu	37	20	43118107	43118107	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	20	43118107	43118107	C	T	SNP	TTPAL	ENST00000262605	human	ensembl	74_37	+1	known	silent	c.954	p.P318	0.000	NULL	pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,prints_CRAL-bd_toc_tran	-	no_errors	TTPAL	HGNC	ENSG00000124120	tier1	-	-	44	0	0.00	80	17	17.53
TUBA1B	0	genome.wustl.edu	37	12	49521906	49521906	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	12	49521906	49521906	C	T	SNP	TUBA1B	ENST00000336023	human	ensembl	74_37	-1	known	silent	c.1191	p.L397	1.000	superfamily_Tub_FtsZ_C,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Beta_tubulin,prints_Delta_tubulin	-	no_errors	TUBA1B	HGNC	ENSG00000123416	tier1	-	-	127	0	0.00	148	26	14.94
UBE2QL1	0	genome.wustl.edu	37	5	6449291	6449291	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	6449291	6449291	C	T	SNP	UBE2QL1	ENST00000399816	human	ensembl	74_37	+1	known	silent	c.285	p.R95	0.999	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2QL1	HGNC	ENSG00000215218	tier1	-	-	10	0	0.00	5	7	58.33
UBQLNL	0	genome.wustl.edu	37	11	5536298	5536298	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	5536298	5536298	C	A	SNP	UBQLNL	ENST00000380184	human	ensembl	74_37	-1	putative	missense	c.1374	p.Q458H	0.662	NULL	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLNL	HGNC	ENSG00000175518	tier1	-	-	25	0	0.00	23	6	20.69
USP1	0	genome.wustl.edu	37	1	62910645	62910645	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	1	62910645	62910645	C	T	SNP	USP1	ENST00000339950	human	ensembl	74_37	+1	known	missense	c.794	p.P265L	0.001	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP1	HGNC	ENSG00000162607				11	0	0.00	14	3	17.65
USP32P1	0	genome.wustl.edu	37	17	16704479	16704480	+	RNA	INS	-	-	GAAT			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	16704479	16704480	-	GAAT	INS	USP32P1	ENST00000444558	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.103:0.004	-	-	-	no_errors	USP32P1	HGNC	ENSG00000188933	tier1			42	0	0.00	19	2	9.52
USP6	0	genome.wustl.edu	37	17	5072078	5072078	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	5072078	5072078	G	A	SNP	USP6	ENST00000250066	human	ensembl	74_37	+1	known	missense	c.3245	p.R1082Q	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Peptidase_C19/C67	-	no_errors	USP6	HGNC	ENSG00000129204	tier1	-	-	120	0	0.00	117	22	15.83
VCAN	0	genome.wustl.edu	37	5	82816669	82816669	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	82816669	82816669	A	C	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	missense	c.2544	p.E848D	0.003	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427	tier1	-	-	25	0	0.00	12	14	53.85
VN1R2	0	genome.wustl.edu	37	19	53762665	53762665	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	53762665	53762665	G	T	SNP	VN1R2	ENST00000341702	human	ensembl	74_37	+1	known	missense	c.1037	p.W346L	0.002	pfam_Vmron_rcpt_1,pfam_GPCR_Rhodpsn,pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_Vmron_rcpt_1,pfam_GPCR_Rhodpsn,pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM,prints_Vmron_rcpt_1	-	no_errors	VN1R2	HGNC	ENSG00000196131	tier1	-	-	79	0	0.00	103	14	11.97
WDFY4	0	genome.wustl.edu	37	10	50171915	50171915	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	10	50171915	50171915	A	C	SNP	WDFY4	ENST00000325239	human	ensembl	74_37	+1	known	missense	c.8252	p.N2751T	1.000	pfam_BEACH_dom,superfamily_BEACH_dom,pfscan_BEACH_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY4	HGNC	ENSG00000128815	tier1	-	-	67	0	0.00	49	49	50.00
WDR49	0	genome.wustl.edu	37	3	167339315	167339315	+	Silent	SNP	A	A	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	167339315	167339315	A	G	SNP	WDR49	ENST00000479765	human	ensembl	74_37	-1	putative	silent	c.723	p.Y241	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_EF_hand_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR49	HGNC	ENSG00000174776	tier1	-	-	26	0	0.00	61	11	15.28
WFIKKN1	0	genome.wustl.edu	37	16	683884	683884	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	16	683884	683884	C	T	SNP	WFIKKN1	ENST00000319070	human	ensembl	74_37	+1	known	missense	c.1474	p.P492S	1.000	pfam_Netrin_module_non-TIMP,superfamily_TIMP-like_OB-fold,pfscan_Netrin_domain	pfam_Prot_inh_Kunz-m,pfam_Ig_I-set,pfam_Ig_V-set,pfam_WAP-type_4-diS_core,pfam_Kazal_dom,pfam_Immunoglobulin,pfam_Netrin_module_non-TIMP,superfamily_TIMP-like_OB-fold,superfamily_Prot_inh_Kunz-m,superfamily_WAP-type_4-diS_core,smart_WAP-type_4-diS_core,smart_Ig_sub,smart_Ig_sub2,smart_Prot_inh_Kunz-m,pfscan_Netrin_domain,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like_dom,prints_Prot_inh_Kunz-m	-	no_errors	WFIKKN1	HGNC	ENSG00000127578	tier1	-	-	66	0	0.00	39	11	22.00
XCR1	0	genome.wustl.edu	37	3	46062567	46062567	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	46062567	46062567	C	T	SNP	XCR1	ENST00000309285	human	ensembl	74_37	-1	known	silent	c.873	p.G291	0.986	prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Brdyknn_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_XCR1,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Brdyknn_rcpt	-	no_errors	XCR1	HGNC	ENSG00000173578	tier1	-	-	54	0	0.00	57	9	13.64
ZC3H4	0	genome.wustl.edu	37	19	47589768	47589768	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	47589768	47589768	C	A	SNP	ZC3H4	ENST00000253048	human	ensembl	74_37	-1	known	missense	c.743	p.R248M	0.998	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H4	HGNC	ENSG00000130749	tier1	-	-	43	0	0.00	45	20	30.77
ZDHHC11B	0	genome.wustl.edu	37	5	710914	710914	+	RNA	SNP	T	T	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	5	710914	710914	T	A	SNP	ZDHHC11B	ENST00000522356	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	ZDHHC11B	HGNC	ENSG00000206077	tier1	-	-	75	0	0.00	296	16	5.13
ZFHX4	0	genome.wustl.edu	37	8	77616566	77616566	+	Silent	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	77616566	77616566	C	A	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	silent	c.243	p.P81	1.000	smart_Znf_C2H2-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	35	0	0.00	49	6	10.91
ZFHX4	0	genome.wustl.edu	37	8	77763524	77763524	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	8	77763524	77763524	T	G	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.4367	p.L1456R	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	39	0	0.00	49	4	7.55
ZFP92	0	genome.wustl.edu	37	X	152686804	152686804	+	Silent	SNP	C	C	T			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	X	152686804	152686804	C	T	SNP	ZFP92	ENST00000338647	human	ensembl	74_37	+1	known	silent	c.969	p.R323	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP92	HGNC	ENSG00000189420	tier1	-	-	15	0	0.00	20	16	44.44
ZIC1	0	genome.wustl.edu	37	3	147128795	147128795	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	3	147128795	147128795	A	G	SNP	ZIC1	ENST00000282928	human	ensembl	74_37	+1	known	missense	c.896	p.E299G	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC1	HGNC	ENSG00000152977	tier1	-	-	47	0	0.00	60	17	22.08
ZNF208	0	genome.wustl.edu	37	19	22156826	22156826	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	22156826	22156826	C	A	SNP	ZNF208	ENST00000397126	human	ensembl	74_37	-1	novel	missense	c.1010	p.G337V	0.350	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF208	HGNC	ENSG00000160321	tier1	-	-	62	0	0.00	57	14	19.72
ZNF33A	0	genome.wustl.edu	37	10	38343629	38343629	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	10	38343629	38343629	G	A	SNP	ZNF33A	ENST00000432900	human	ensembl	74_37	+1	known	missense	c.595	p.V199I	0.050	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF33A	HGNC	ENSG00000189180	tier1	-	-	39	0	0.00	57	5	8.06
ZNF408	0	genome.wustl.edu	37	11	46726758	46726758	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	11	46726758	46726758	G	A	SNP	ZNF408	ENST00000311764	human	ensembl	74_37	+1	known	missense	c.1508	p.R503Q	0.997	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF408	HGNC	ENSG00000175213	tier1	-	-	53	0	0.00	24	21	46.67
ZNF415	0	genome.wustl.edu	37	19	53613064	53613064	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	53613064	53613064	T	A	SNP	ZNF415	ENST00000448501	human	ensembl	74_37	-1	known	missense	c.378	p.K126N	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,smart_Znf_BED_prd,pfscan_Znf_C2H2	-	no_errors	ZNF415	HGNC	ENSG00000170954	tier1	-	-	81	0	0.00	108	6	5.26
ZNF469	0	genome.wustl.edu	37	16	88501491	88501491	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	16	88501491	88501491	G	A	SNP	ZNF469	ENST00000437464	human	ensembl	74_37	+1	known	missense	c.7529	p.R2510K	0.007	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF469	HGNC	ENSG00000225614	tier1	-	-	44	0	0.00	52	6	10.34
ZNF470	0	genome.wustl.edu	37	19	57088951	57088951	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	57088951	57088951	G	A	SNP	ZNF470	ENST00000330619	human	ensembl	74_37	+1	known	missense	c.1154	p.R385H	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF470	HGNC	ENSG00000197016	tier1	-	-	33	0	0.00	39	15	27.78
ZNF518B	0	genome.wustl.edu	37	4	10446830	10446830	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	4	10446830	10446830	C	A	SNP	ZNF518B	ENST00000326756	human	ensembl	74_37	-1	known	missense	c.1123	p.G375W	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF518B	HGNC	ENSG00000178163	tier1	-	-	46	0	0.00	37	9	19.57
ZNF521	0	genome.wustl.edu	37	18	22805695	22805695	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	18	22805695	22805695	T	G	SNP	ZNF521	ENST00000361524	human	ensembl	74_37	-1	known	missense	c.2187	p.E729D	0.992	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF521	HGNC	ENSG00000198795	tier1	-	-	37	0	0.00	50	6	10.71
ZNF536	0	genome.wustl.edu	37	19	30936157	30936157	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	30936157	30936157	A	C	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	missense	c.1688	p.K563T	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597	tier1	-	-	41	0	0.00	36	11	23.40
ZNF564	0	genome.wustl.edu	37	19	12637330	12637330	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	12637330	12637330	T	A	SNP	ZNF564	ENST00000339282	human	ensembl	74_37	-1	known	missense	c.1592	p.K531I	0.982	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF564	HGNC	ENSG00000249709	tier1	-	-	21	0	0.00	37	7	15.91
ZNF594	0	genome.wustl.edu	37	17	5085463	5085463	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	17	5085463	5085463	G	A	SNP	ZNF594	ENST00000399604	human	ensembl	74_37	-1	known	nonsense	c.2089	p.Q697*	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF594	HGNC	ENSG00000180626	tier1	-	-	73	0	0.00	83	6	6.74
ZNF766	0	genome.wustl.edu	37	19	52793491	52793491	+	Silent	SNP	T	T	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	52793491	52793491	T	G	SNP	ZNF766	ENST00000359102	human	ensembl	74_37	+1	known	silent	c.492	p.L164	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF766	HGNC	ENSG00000196214				11	0	0.00	13	3	18.75
ZNF99	0	genome.wustl.edu	37	19	22940992	22940992	+	Silent	SNP	A	A	G			TCGA-L5-A4OW-01A-11D-A28B-09	TCGA-L5-A4OW-11A-11D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee548b30-729e-4ee2-abd7-33e6661fa4bc	ca4efbd8-835c-4a24-b3f9-4a6e7b01995e	19	22940992	22940992	A	G	SNP	ZNF99	ENST00000397104	human	ensembl	74_37	-1	known	silent	c.1446	p.A482	0.055	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF99	HGNC	ENSG00000213973	tier1	-	-	34	0	0.00	37	7	15.91
