Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AACS	0	genome.wustl.edu	37	12	125591812	125591812	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	125591812	125591812	G	T	SNP	AACS	ENST00000316519	human	ensembl	74_37	+1	known	missense	c.913	p.G305W	1.000	pfam_AMP-dep_Synth/Lig,tigrfam_Acac_CoA_synth	pfam_AMP-dep_Synth/Lig,tigrfam_Acac_CoA_synth	-	no_errors	AACS	HGNC	ENSG00000081760				41	0	0.00	30	2	6.06
AAMP	0	genome.wustl.edu	37	2	219131642	219131642	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	2	219131642	219131642	C	T	SNP	AAMP	ENST00000248450	human	ensembl	74_37	-1	known	missense	c.462	p.M154I	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	AAMP	HGNC	ENSG00000127837	tier1	-	-	77	0	0.00	59	4	6.35
ABCA12	0	genome.wustl.edu	37	2	215818665	215818665	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	2	215818665	215818665	C	T	SNP	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	missense	c.6560	p.G2187D	0.999	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452	tier1	-	-	86	0	0.00	49	4	7.55
ABCC12	0	genome.wustl.edu	37	16	48125057	48125057	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	16	48125057	48125057	C	T	SNP	ABCC12	ENST00000311303	human	ensembl	74_37	-1	known	missense	c.3259	p.V1087M	0.996	superfamily_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC12	HGNC	ENSG00000140798				51	0	0.00	37	2	5.13
ACVR1C	0	genome.wustl.edu	37	2	158397600	158397600	+	Splice_Site	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	2	158397600	158397600	A	G	SNP	ACVR1C	ENST00000243349	human	ensembl	74_37	-1	known	splice_site	c.1225+2	e7+2	1.000	-	-	-	no_errors	ACVR1C	HGNC	ENSG00000123612	tier1	-	-	144	0	0.00	115	22	16.06
AFF2	0	genome.wustl.edu	37	X	148044441	148044441	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	X	148044441	148044441	G	T	SNP	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	missense	c.2887	p.A963S	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966				28	0	0.00	25	3	10.71
AK3	0	genome.wustl.edu	37	9	4741041	4741041	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	9	4741041	4741041	G	A	SNP	AK3	ENST00000381809	human	ensembl	74_37	-1	known	missense	c.47	p.P16L	1.000	pfam_Adenylate_kin,superfamily_P-loop_NTPase,prints_Adenylate_kin,tigrfam_Adenyl_kin_sub	pfam_Adenylate_kin,pfam_Adenylate_kinase_lid-dom,superfamily_P-loop_NTPase,superfamily_Adenylate_kinase_lid-dom,prints_Adenylate_kin,tigrfam_Adenyl_kin_sub	-	no_errors	AK3	HGNC	ENSG00000147853				62	0	0.00	57	4	6.56
AKAP9	0	genome.wustl.edu	37	7	91714250	91714250	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	7	91714250	91714250	T	A	SNP	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	missense	c.8840	p.I2947K	1.000	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914	tier1	-	-	29	0	0.00	65	38	36.89
ALPK2	0	genome.wustl.edu	37	18	56202529	56202529	+	Silent	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	18	56202529	56202529	A	G	SNP	ALPK2	ENST00000361673	human	ensembl	74_37	-1	known	silent	c.4890	p.P1630	0.004	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK2	HGNC	ENSG00000198796	tier1	-	-	111	0	0.00	100	9	8.26
ALPK3	0	genome.wustl.edu	37	15	85400870	85400870	+	Silent	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	15	85400870	85400870	G	T	SNP	ALPK3	ENST00000258888	human	ensembl	74_37	+1	known	silent	c.3507	p.L1169	0.934	NULL	pfam_MHCK_EF2_kinase,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase,pfscan_Ig-like_dom	-	no_errors	ALPK3	HGNC	ENSG00000136383	tier1	-	-	47	0	0.00	61	4	6.15
ANK3	0	genome.wustl.edu	37	10	61905767	61905767	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	10	61905767	61905767	G	T	SNP	ANK3	ENST00000503366	human	ensembl	74_37	-1	putative	missense	c.2576	p.T859K	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150	tier1	-	-	106	0	0.00	98	13	11.61
ANK3	0	genome.wustl.edu	37	10	61834168	61834168	+	Silent	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	10	61834168	61834168	G	T	SNP	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	silent	c.6471	p.P2157	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150				38	0	0.00	38	2	5.00
ANKRD11	0	genome.wustl.edu	37	16	89349640	89349641	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	16	89349640	89349641	-	T	INS	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	frame_shift_ins	c.3310_3309	p.D1103fs	1.000:1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522	tier1			26	0	0.00	26	2	7.14
ASPM	0	genome.wustl.edu	37	1	197097636	197097636	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	197097636	197097636	A	C	SNP	ASPM	ENST00000367409	human	ensembl	74_37	-1	known	missense	c.2920	p.C974G	1.000	superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_IQ_motif_EF-hand-BS,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_CH-domain,smart_IQ_motif_EF-hand-BS,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS	-	no_errors	ASPM	HGNC	ENSG00000066279	tier1	-	-	112	0	0.00	129	11	7.86
BACH1	0	genome.wustl.edu	37	21	31002955	31002955	+	RNA	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	21	31002955	31002955	C	T	SNP	BACH1	ENST00000462262	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	BACH1	HGNC	ENSG00000156273				18	0	0.00	30	4	11.76
BLZF1	0	genome.wustl.edu	37	1	169349810	169349810	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	169349810	169349810	C	T	SNP	BLZF1	ENST00000329281	human	ensembl	74_37	+1	known	missense	c.760	p.R254W	1.000	NULL	pfam_Hsk3_like	-	no_errors	BLZF1	HGNC	ENSG00000117475	tier1	-	-	91	0	0.00	72	7	8.86
BRD1	0	genome.wustl.edu	37	22	50217249	50217249	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	22	50217249	50217249	C	T	SNP	BRD1	ENST00000216267	human	ensembl	74_37	-1	known	silent	c.717	p.L239	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP_dom,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,prints_Bromodomain,pfscan_PWWP_dom,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	BRD1	HGNC	ENSG00000100425	tier1	-	-	18	0	0.00	10	3	23.08
BRI3BP	0	genome.wustl.edu	37	12	125509842	125509842	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	125509842	125509842	A	G	SNP	BRI3BP	ENST00000341446	human	ensembl	74_37	+1	known	missense	c.622	p.S208G	0.704	NULL	NULL	-	no_errors	BRI3BP	HGNC	ENSG00000184992				59	0	0.00	60	6	9.09
BRI3BP	0	genome.wustl.edu	37	12	125509844	125509844	+	Silent	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	125509844	125509844	T	C	SNP	BRI3BP	ENST00000341446	human	ensembl	74_37	+1	known	silent	c.624	p.S208	0.982	NULL	NULL	-	no_errors	BRI3BP	HGNC	ENSG00000184992				57	0	0.00	60	7	10.45
BTN3A3	0	genome.wustl.edu	37	6	26452620	26452620	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	6	26452620	26452620	G	A	SNP	BTN3A3	ENST00000244519	human	ensembl	74_37	+1	known	missense	c.1736	p.R579H	0.001	NULL	pfam_SPRY_rcpt,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Ig-like_dom,prints_Butyrophylin	-	no_errors	BTN3A3	HGNC	ENSG00000111801				56	0	0.00	34	2	5.56
C12orf40	0	genome.wustl.edu	37	12	40041727	40041727	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	40041727	40041727	G	T	SNP	C12orf40	ENST00000324616	human	ensembl	74_37	+1	known	missense	c.518	p.G173V	0.001	NULL	NULL	-	no_errors	C12orf40	HGNC	ENSG00000180116	tier1	-	-	77	0	0.00	56	4	6.56
CACNA1G	0	genome.wustl.edu	37	17	48673965	48673965	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	17	48673965	48673965	C	T	SNP	CACNA1G	ENST00000359106	human	ensembl	74_37	+1	known	missense	c.3022	p.P1008S	0.888	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1G	HGNC	ENSG00000006283	tier1	-	-	82	0	0.00	66	4	5.63
CACNA1G	0	genome.wustl.edu	37	17	48694853	48694853	+	Silent	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	17	48694853	48694853	G	T	SNP	CACNA1G	ENST00000359106	human	ensembl	74_37	+1	known	silent	c.5076	p.L1692	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1G	HGNC	ENSG00000006283				59	0	0.00	72	5	6.49
CC2D1B	0	genome.wustl.edu	37	1	52820354	52820354	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	52820354	52820354	C	T	SNP	CC2D1B	ENST00000371586	human	ensembl	74_37	-1	known	missense	c.2374	p.D792N	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_DM14,smart_C2_dom	-	no_errors	CC2D1B	HGNC	ENSG00000154222				67	0	0.00	36	2	5.26
CCDC149	0	genome.wustl.edu	37	4	24838108	24838108	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	4	24838108	24838108	G	A	SNP	CCDC149	ENST00000504487	human	ensembl	74_37	-1	known	nonsense	c.685	p.Q229*	1.000	pfam_Coiled-coil_dom-contain_pr_149	pfam_Coiled-coil_dom-contain_pr_149	-	no_errors	CCDC149	HGNC	ENSG00000181982	tier1	-	-	52	0	0.00	56	4	6.67
CCNI2	0	genome.wustl.edu	37	5	132088631	132088631	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	5	132088631	132088631	G	A	SNP	CCNI2	ENST00000378731	human	ensembl	74_37	+1	novel	missense	c.1079	p.C360Y	0.000	NULL	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNI2	HGNC	ENSG00000205089	tier1	-	-	46	0	0.00	41	9	18.00
CCR7	0	genome.wustl.edu	37	17	38711549	38711549	+	Silent	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	17	38711549	38711549	G	A	SNP	CCR7	ENST00000246657	human	ensembl	74_37	-1	known	silent	c.582	p.L194	0.996	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR7,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR7,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CXCR4,prints_Chemokine_CCRL1	-	no_errors	CCR7	HGNC	ENSG00000126353				19	0	0.00	15	2	11.76
CD93	0	genome.wustl.edu	37	20	23066170	23066170	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	20	23066170	23066170	C	T	SNP	CD93	ENST00000246006	human	ensembl	74_37	-1	known	silent	c.660	p.A220	0.000	pirsf_CD93/CD141	pirsf_CD93/CD141,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_MFS_dom_general_subst_transpt,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_C-type_lectin	-	no_errors	CD93	HGNC	ENSG00000125810	tier1	-	-	56	0	0.00	64	16	20.00
CDRT15L2	0	genome.wustl.edu	37	17	20483230	20483230	+	Silent	SNP	C	C	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	17	20483230	20483230	C	A	SNP	CDRT15L2	ENST00000399044	human	ensembl	74_37	+1	known	silent	c.174	p.G58	0.006	NULL	NULL	-	no_errors	CDRT15L2	HGNC	ENSG00000214819	tier1	-	-	82	0	0.00	77	12	13.48
CELSR2	0	genome.wustl.edu	37	1	109793851	109793851	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	109793851	109793851	G	A	SNP	CELSR2	ENST00000271332	human	ensembl	74_37	+1	known	missense	c.1150	p.A384T	0.097	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126				78	0	0.00	48	3	5.88
CELSR3	0	genome.wustl.edu	37	3	48697619	48697619	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	3	48697619	48697619	G	T	SNP	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	missense	c.2449	p.L817M	0.986	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300	tier1	-	-	32	0	0.00	40	4	9.09
CEP120	0	genome.wustl.edu	37	5	122717867	122717867	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	5	122717867	122717867	G	A	SNP	CEP120	ENST00000306467	human	ensembl	74_37	-1	known	nonsense	c.2041	p.Q681*	1.000	NULL	pfam_DUF3668,superfamily_C2_dom	-	no_errors	CEP120	HGNC	ENSG00000168944				81	0	0.00	76	5	6.17
CHSY3	0	genome.wustl.edu	37	5	129520782	129520782	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	5	129520782	129520782	G	T	SNP	CHSY3	ENST00000305031	human	ensembl	74_37	+1	known	missense	c.1947	p.K649N	1.000	pfam_Chond_GalNAc	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHSY3	HGNC	ENSG00000198108				34	0	0.00	38	2	5.00
CISD3	0	genome.wustl.edu	37	17	36891292	36891292	+	RNA	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	17	36891292	36891292	T	C	SNP	CISD3	ENST00000578573	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CISD3	HGNC	ENSG00000230055	tier1	-	-	234	0	0.00	202	50	19.84
CLVS2	0	genome.wustl.edu	37	6	123319130	123319130	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	6	123319130	123319130	C	T	SNP	CLVS2	ENST00000275162	human	ensembl	74_37	+1	known	missense	c.208	p.R70C	1.000	pfam_CRAL/TRIO_N_dom,superfamily_CRAL/TRIO_N_dom,prints_CRAL-bd_toc_tran	pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,prints_CRAL-bd_toc_tran	-	no_errors	CLVS2	HGNC	ENSG00000146352	tier1	-	-	43	0	0.00	57	7	10.94
CMYA5	0	genome.wustl.edu	37	5	79059088	79059088	+	RNA	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	5	79059088	79059088	G	A	SNP	CMYA5	ENST00000505466	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CMYA5	HGNC	ENSG00000164309	tier1	-	-	33	0	0.00	22	14	38.89
COBLL1	0	genome.wustl.edu	37	2	165552272	165552272	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	2	165552272	165552272	T	C	SNP	COBLL1	ENST00000194871	human	ensembl	74_37	-1	known	missense	c.1945	p.I649V	0.196	NULL	pfam_Cordon-bleu_ubiquitin_domain,pfscan_WH2_dom	-	no_errors	COBLL1	HGNC	ENSG00000082438	tier1	-	-	83	0	0.00	71	15	17.44
CPA4	0	genome.wustl.edu	37	7	129946698	129946698	+	Silent	SNP	T	T	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	7	129946698	129946698	T	A	SNP	CPA4	ENST00000222482	human	ensembl	74_37	+1	known	silent	c.663	p.P221	0.998	pfam_Peptidase_M14,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA4	HGNC	ENSG00000128510	tier1	-	-	48	0	0.00	29	4	12.12
CRNKL1	0	genome.wustl.edu	37	20	20019078	20019078	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	20	20019078	20019078	T	C	SNP	CRNKL1	ENST00000377340	human	ensembl	74_37	-1	known	missense	c.2045	p.Y682C	1.000	smart_HAT	pfam_HAT,pfam_Suf,smart_HAT,pfscan_TPR-contain_dom	-	no_errors	CRNKL1	HGNC	ENSG00000101343	tier1	-	-	84	0	0.00	99	22	18.18
CSK	0	genome.wustl.edu	37	15	75094182	75094182	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	15	75094182	75094182	C	T	SNP	CSK	ENST00000220003	human	ensembl	74_37	+1	known	missense	c.1034	p.T345M	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	CSK	HGNC	ENSG00000103653	tier1	-	-	27	0	0.00	26	4	13.33
CTU2	0	genome.wustl.edu	37	16	88779139	88779139	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	16	88779139	88779139	T	C	SNP	CTU2	ENST00000567949	human	ensembl	74_37	+1	known	missense	c.776	p.L259P	0.009	NULL	pfam_Thiouridylase_cyt_su2	-	no_errors	CTU2	HGNC	ENSG00000174177	tier1	-	-	47	0	0.00	33	4	10.53
DBI	0	genome.wustl.edu	37	2	120125868	120125868	+	Silent	SNP	C	C	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	2	120125868	120125868	C	A	SNP	DBI	ENST00000542275	human	ensembl	74_37	+1	known	silent	c.297	p.G99	0.637	pfam_Acyl-CoA-binding_protein,superfamily_Acyl-CoA-binding_protein,prints_Acyl-CoA-binding_protein	pfam_Acyl-CoA-binding_protein,superfamily_Acyl-CoA-binding_protein,prints_Acyl-CoA-binding_protein	-	no_errors	DBI	HGNC	ENSG00000155368	tier1	-	-	41	0	0.00	31	10	24.39
DCAF6	0	genome.wustl.edu	37	1	167985183	167985183	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	167985183	167985183	G	T	SNP	DCAF6	ENST00000367840	human	ensembl	74_37	+1	known	missense	c.1543	p.A515S	0.012	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_IQ_motif_EF-hand-BS,pfscan_WD40_repeat_dom	-	no_errors	DCAF6	HGNC	ENSG00000143164	tier1	-	-	44	0	0.00	39	4	9.30
DDAH1	0	genome.wustl.edu	37	1	85787117	85787118	+	RNA	INS	-	-	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	85787117	85787118	-	G	INS	DDAH1	ENST00000483110	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002:0.010	-	-	-	no_errors	DDAH1	HGNC	ENSG00000153904	tier1			96	0	0.00	66	49	42.61
DDX54	0	genome.wustl.edu	37	12	113617119	113617119	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	113617119	113617119	C	G	SNP	DDX54	ENST00000314045	human	ensembl	74_37	-1	known	missense	c.393	p.L131F	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DBP10CT,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX54	HGNC	ENSG00000123064	tier1	-	-	45	0	0.00	31	4	11.43
DENND2C	0	genome.wustl.edu	37	1	115127989	115127989	+	RNA	DEL	A	A	-			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	115127989	115127989	A	-	DEL	DENND2C	ENST00000495031	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DENND2C	HGNC	ENSG00000175984	tier1			27	0	0.00	12	6	33.33
DEPDC5	0	genome.wustl.edu	37	22	32205625	32205625	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	22	32205625	32205625	G	T	SNP	DEPDC5	ENST00000266091	human	ensembl	74_37	+1	known	missense	c.1316	p.R439L	1.000	NULL	pfam_IML1,pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	-	no_errors	DEPDC5	HGNC	ENSG00000100150	tier1	-	-	41	0	0.00	53	4	7.02
DHX57	0	genome.wustl.edu	37	2	39042707	39042707	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	2	39042707	39042707	T	C	SNP	DHX57	ENST00000295373	human	ensembl	74_37	-1	known	missense	c.3562	p.R1188G	0.688	pfam_DUF1605	pfam_RWD-domain,pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Znf_CCCH,superfamily_P-loop_NTPase,superfamily_UBA-like,superfamily_UBQ-conjugating_enzyme/RWD,smart_Znf_CCCH,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX57	HGNC	ENSG00000163214				95	0	0.00	76	4	5.00
DIDO1	0	genome.wustl.edu	37	20	61542393	61542393	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	20	61542393	61542393	T	A	SNP	DIDO1	ENST00000266070	human	ensembl	74_37	-1	known	missense	c.572	p.K191M	0.032	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	DIDO1	HGNC	ENSG00000101191	tier1	-	-	28	0	0.00	26	5	15.62
DST	0	genome.wustl.edu	37	6	56418172	56418172	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	6	56418172	56418172	G	T	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.15325	p.L5109I	0.999	pfam_Spectrin_repeat,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	37	0	0.00	58	4	6.45
EGF	0	genome.wustl.edu	37	4	110901176	110901176	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	4	110901176	110901176	A	G	SNP	EGF	ENST00000265171	human	ensembl	74_37	+1	known	missense	c.2102	p.D701G	1.000	pirsf_Pro-epidermal_GF,smart_LDLR_classB_rpt	pirsf_Pro-epidermal_GF,pfam_LDLR_classB_rpt,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt	-	no_errors	EGF	HGNC	ENSG00000138798	tier1	-	-	68	0	0.00	46	25	35.21
ENSG00000216113	0	genome.wustl.edu	37	8	104863873	104863874	+	RNA	DEL	AC	AC	-			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	8	104863873	104863874	AC	-	DEL	ENSG00000216113	ENST00000401294	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AP001572.1	Clone_based_ensembl_gene	ENSG00000216113	tier1			20	0	0.00	21	5	19.23
ENSG00000225946	0	genome.wustl.edu	37	7	100608467	100608468	+	RNA	INS	-	-	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	7	100608467	100608468	-	T	INS	ENSG00000225946	ENST00000420080	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	RP11-395B7.2	Clone_based_vega_gene	ENSG00000225946	tier1			22	0	0.00	14	8	36.36
ENSG00000267643	0	genome.wustl.edu	37	18	12201074	12201074	+	RNA	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	18	12201074	12201074	A	G	SNP	ENSG00000267643	ENST00000592203	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-64C12.4	Clone_based_vega_gene	ENSG00000267643	tier1	-	-	31	0	0.00	16	3	15.79
ENSG00000272486	0	genome.wustl.edu	37	8	125592785	125592785	+	RNA	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	8	125592785	125592785	G	T	SNP	ENSG00000272486	ENST00000606244	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.755	-	-	-	no_errors	RP11-532M24.1	Clone_based_vega_gene	ENSG00000272486	tier1	-	-	68	0	0.00	53	4	7.02
ERBB3	0	genome.wustl.edu	37	12	56495558	56495558	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	56495558	56495558	C	T	SNP	ERBB3	ENST00000267101	human	ensembl	74_37	+1	known	missense	c.3748	p.P1250S	0.342	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Furin-like_Cys-rich_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB3	HGNC	ENSG00000065361	tier1	-	-	74	0	0.00	63	4	5.97
ERC2	0	genome.wustl.edu	37	3	55543261	55543262	+	RNA	INS	-	-	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	3	55543261	55543262	-	T	INS	ERC2	ENST00000484530	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.078:0.002	-	-	-	no_errors	ERC2	HGNC	ENSG00000187672	tier1			41	0	0.00	22	3	12.00
ERCC8	0	genome.wustl.edu	37	5	60183321	60183321	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	5	60183321	60183321	G	T	SNP	ERCC8	ENST00000265038	human	ensembl	74_37	-1	known	nonsense	c.1068	p.C356*	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	ERCC8	HGNC	ENSG00000049167				84	0	0.00	54	3	5.26
EXOSC10	0	genome.wustl.edu	37	1	11137657	11137657	+	Splice_Site	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	11137657	11137657	C	T	SNP	EXOSC10	ENST00000376936	human	ensembl	74_37	-1	known	splice_site	c.1800+1	e15+1	1.000	-	-	-	no_errors	EXOSC10	HGNC	ENSG00000171824				25	0	0.00	35	4	10.26
FAM135B	0	genome.wustl.edu	37	8	139180219	139180219	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	8	139180219	139180219	C	T	SNP	FAM135B	ENST00000395297	human	ensembl	74_37	-1	known	missense	c.1177	p.A393T	0.958	NULL	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like	-	no_errors	FAM135B	HGNC	ENSG00000147724	tier1	-	-	43	0	0.00	30	4	11.76
FAM178A	0	genome.wustl.edu	37	10	102721632	102721632	+	Splice_Site	SNP	A	A	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	10	102721632	102721632	A	T	SNP	FAM178A	ENST00000238961	human	ensembl	74_37	+1	known	splice_site	c.3487-2	e20-2	1.000	-	-	-	no_errors	FAM178A	HGNC	ENSG00000119906	tier1	-	-	35	0	0.00	48	4	7.69
FAM189A1	0	genome.wustl.edu	37	15	29421029	29421029	+	Silent	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	15	29421029	29421029	G	T	SNP	FAM189A1	ENST00000261275	human	ensembl	74_37	-1	known	silent	c.966	p.S322	0.992	NULL	pfam_CD20-like	-	no_errors	FAM189A1	HGNC	ENSG00000104059				71	0	0.00	71	4	5.33
FAM86DP	0	genome.wustl.edu	37	3	75471400	75471400	+	RNA	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	3	75471400	75471400	C	T	SNP	FAM86DP	ENST00000459803	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	FAM86DP	HGNC	ENSG00000244026				9	0	0.00	13	4	23.53
FAM91A1	0	genome.wustl.edu	37	8	124790951	124790951	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	8	124790951	124790951	A	G	SNP	FAM91A1	ENST00000334705	human	ensembl	74_37	+1	known	missense	c.488	p.E163G	1.000	NULL	NULL	-	no_errors	FAM91A1	HGNC	ENSG00000176853	tier1	-	-	91	0	0.00	74	4	5.13
FANCA	0	genome.wustl.edu	37	16	89837003	89837003	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	16	89837003	89837003	T	C	SNP	FANCA	ENST00000389301	human	ensembl	74_37	-1	known	missense	c.2191	p.M731V	0.040	NULL	pfam_Fanconia,prints_Fanconia	-	no_errors	FANCA	HGNC	ENSG00000187741	tier1	-	-	90	0	0.00	91	5	5.21
FAT1	0	genome.wustl.edu	37	4	187629096	187629096	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	4	187629096	187629096	G	-	DEL	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	frame_shift_del	c.1886	p.S629fs	0.998	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	tier1			75	0	0.00	54	20	27.03
FAT3	0	genome.wustl.edu	37	11	92531258	92531258	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	11	92531258	92531258	C	G	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.5079	p.I1693M	0.998	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	38	0	0.00	26	5	16.13
FAT4	0	genome.wustl.edu	37	4	126242539	126242539	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	4	126242539	126242539	G	T	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.4973	p.G1658V	0.998	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	tier1	-	-	88	0	0.00	57	4	6.56
FBXO7	0	genome.wustl.edu	37	22	32875073	32875073	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	22	32875073	32875073	G	T	SNP	FBXO7	ENST00000266087	human	ensembl	74_37	+1	known	missense	c.228	p.L76F	0.870	NULL	pfam_FP_dom,pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO7	HGNC	ENSG00000100225	tier1	-	-	53	0	0.00	48	4	7.69
FGF23	0	genome.wustl.edu	37	12	4479523	4479523	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	4479523	4479523	C	T	SNP	FGF23	ENST00000237837	human	ensembl	74_37	-1	known	missense	c.742	p.A248T	0.030	NULL	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF23	HGNC	ENSG00000118972	tier1	-	-	69	0	0.00	56	9	13.85
FGR	0	genome.wustl.edu	37	1	27942244	27942244	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	27942244	27942244	A	G	SNP	FGR	ENST00000374003	human	ensembl	74_37	-1	known	missense	c.794	p.L265P	0.816	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	FGR	HGNC	ENSG00000000938	tier1	-	-	38	0	0.00	39	4	9.30
FNDC1	0	genome.wustl.edu	37	6	159621085	159621085	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	6	159621085	159621085	G	A	SNP	FNDC1	ENST00000297267	human	ensembl	74_37	+1	known	missense	c.362	p.R121H	0.986	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC1	HGNC	ENSG00000164694	tier1	-	-	100	0	0.00	78	18	18.75
FRMPD3	0	genome.wustl.edu	37	X	106841057	106841059	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	X	106841057	106841059	GAG	-	DEL	FRMPD3	ENST00000276185	human	ensembl	74_37	+1	known	in_frame_del	c.2047_2049	p.E686in_frame_del	1.000:1.000:1.000	NULL	pfam_FERM_central,pfam_PDZ,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ	-	no_errors	FRMPD3	HGNC	ENSG00000147234	tier1			23	0	0.00	26	6	18.75
FUT9	0	genome.wustl.edu	37	6	96651510	96651510	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	6	96651510	96651510	G	A	SNP	FUT9	ENST00000302103	human	ensembl	74_37	+1	known	missense	c.479	p.R160H	0.950	pfam_Glyco_trans_10	pfam_Glyco_trans_10	-	no_errors	FUT9	HGNC	ENSG00000172461	tier1	-	-	48	0	0.00	42	6	12.50
GALE	0	genome.wustl.edu	37	1	24124733	24124733	+	RNA	SNP	C	C	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	24124733	24124733	C	G	SNP	GALE	ENST00000467493	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GALE	HGNC	ENSG00000117308	tier1	-	-	56	0	0.00	50	41	45.05
GDPD1	0	genome.wustl.edu	37	17	57334523	57334523	+	Silent	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	17	57334523	57334523	G	T	SNP	GDPD1	ENST00000284116	human	ensembl	74_37	+1	known	silent	c.408	p.L136	1.000	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors	GDPD1	HGNC	ENSG00000153982	tier1	-	-	121	0	0.00	113	6	5.04
GIF	0	genome.wustl.edu	37	11	59604768	59604768	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	11	59604768	59604768	C	T	SNP	GIF	ENST00000257248	human	ensembl	74_37	-1	known	silent	c.750	p.T250	0.969	pfam_Cbl-bd_transpt_euk	pfam_Cbl-bd_transpt_euk	-	no_errors	GIF	HGNC	ENSG00000134812	tier1	-	-	89	0	0.00	84	16	16.00
GOLGA8DP	0	genome.wustl.edu	37	15	22705501	22705501	+	Splice_Site	DEL	C	C	-			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	15	22705501	22705501	C	-	DEL	GOLGA8DP	ENST00000314246	human	ensembl	74_37	-1	known	splice_site_del	c.NULL	NULL	0.006	-	-	-	no_errors	GOLGA8DP	HGNC	ENSG00000185182	tier1			12	0	0.00	6	8	57.14
HBE1	0	genome.wustl.edu	37	11	5290891	5290891	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	11	5290891	5290891	G	T	SNP	HBE1	ENST00000292896	human	ensembl	74_37	-1	known	nonsense	c.108	p.Y36*	0.998	pfam_Globin,superfamily_Globin-like,pfscan_Globin,prints_Haemoglobin_b	pfam_Globin,superfamily_Globin-like,pfscan_Globin,prints_Haemoglobin_b,prints_Myoglobin	-	no_errors	HBE1	HGNC	ENSG00000213931	tier1	-	-	57	0	0.00	31	11	26.19
HBP1	0	genome.wustl.edu	37	7	106822898	106822898	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	7	106822898	106822898	C	A	SNP	HBP1	ENST00000222574	human	ensembl	74_37	+1	known	missense	c.250	p.Q84K	1.000	NULL	pfam_Ataxin-1_HBP1,pfam_HMG_box_dom,superfamily_Ataxin-1_HBP1,superfamily_HMG_box_dom,smart_Ataxin_AXH_dom,smart_HMG_box_dom,pfscan_Ataxin-1_HBP1,pfscan_HMG_box_dom	-	no_errors	HBP1	HGNC	ENSG00000105856	tier1	-	-	86	0	0.00	39	21	35.00
HCFC1R1	0	genome.wustl.edu	37	16	3073311	3073311	+	Silent	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	16	3073311	3073311	G	A	SNP	HCFC1R1	ENST00000248089	human	ensembl	74_37	-1	known	silent	c.204	p.F68	1.000	NULL	NULL	-	no_errors	HCFC1R1	HGNC	ENSG00000103145	tier1	-	-	30	0	0.00	26	11	29.73
HTT	0	genome.wustl.edu	37	4	3184082	3184082	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	4	3184082	3184082	T	C	SNP	HTT	ENST00000355072	human	ensembl	74_37	+1	known	missense	c.4751	p.V1584A	1.000	NULL	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386	tier1	-	-	63	0	0.00	61	4	6.15
IKBKAP	0	genome.wustl.edu	37	9	111688831	111688831	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	9	111688831	111688831	C	T	SNP	IKBKAP	ENST00000374647	human	ensembl	74_37	-1	known	silent	c.438	p.Q146	0.955	pfam_IKI3,pirsf_IKI3	pfam_IKI3,superfamily_ARM-type_fold,superfamily_UBA-like,pirsf_IKI3	-	no_errors	IKBKAP	HGNC	ENSG00000070061	tier1	-	-	78	0	0.00	52	4	7.14
IL1B	0	genome.wustl.edu	37	2	113591100	113591100	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	2	113591100	113591100	C	T	SNP	IL1B	ENST00000263341	human	ensembl	74_37	-1	known	missense	c.152	p.R51Q	0.024	pfam_IL-1_propep,prints_IL-1_beta	pfam_IL-1,pfam_IL-1_propep,superfamily_Cytokine_IL1-like,smart_IL-1,prints_IL-1_beta,prints_IL-1_alpha/beta,prints_IL-1,prints_IL-1_fam/FGF_fam,prints_IL-1RA/IL-36	-	no_errors	IL1B	HGNC	ENSG00000125538				31	0	0.00	22	2	8.33
IL1RAPL2	0	genome.wustl.edu	37	X	105011645	105011645	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	X	105011645	105011645	T	G	SNP	IL1RAPL2	ENST00000344799	human	ensembl	74_37	+1	known	missense	c.2052	p.D684E	1.000	NULL	pfam_TIR_dom,superfamily_TIR_dom,smart_Ig_sub,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom,prints_IL-1_rcpt_II-typ	-	no_errors	IL1RAPL2	HGNC	ENSG00000189108	tier1	-	-	11	0	0.00	8	6	42.86
IL1RL2	0	genome.wustl.edu	37	2	102835498	102835498	+	Silent	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	2	102835498	102835498	G	T	SNP	IL1RL2	ENST00000264257	human	ensembl	74_37	+1	known	silent	c.810	p.V270	0.694	smart_Ig_sub	pfam_TIR_dom,superfamily_TIR_dom,smart_Ig_sub,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom,prints_IL-1_rcpt_I/II-typ,prints_IL-1_rcpt_I-typ	-	no_errors	IL1RL2	HGNC	ENSG00000115598	tier1	-	-	70	0	0.00	60	4	6.25
IL6ST	0	genome.wustl.edu	37	5	55256372	55256372	+	Silent	SNP	T	T	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	5	55256372	55256372	T	A	SNP	IL6ST	ENST00000336909	human	ensembl	74_37	-1	known	silent	c.831	p.T277	0.997	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_IgC2-like_lig-bd,pfam_Fibronectin_type3,pfam_IL-6_rcpt_alpha-bd,pfam_Growth/epo_recpt_lig-bind,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL6ST	HGNC	ENSG00000134352	tier1	-	-	51	0	0.00	47	13	21.67
IQUB	0	genome.wustl.edu	37	7	123150076	123150076	+	Silent	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	7	123150076	123150076	A	G	SNP	IQUB	ENST00000324698	human	ensembl	74_37	-1	known	silent	c.411	p.L137	0.993	pfscan_Ubiquitin_supergroup	pfam_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	IQUB	HGNC	ENSG00000164675	tier1	-	-	149	0	0.00	88	40	31.25
ITPKC	0	genome.wustl.edu	37	19	41239217	41239217	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	19	41239217	41239217	G	T	SNP	ITPKC	ENST00000263370	human	ensembl	74_37	+1	known	missense	c.1622	p.R541M	1.000	pfam_IPK	pfam_IPK	-	no_errors	ITPKC	HGNC	ENSG00000086544				55	0	0.00	51	3	5.56
JMJD1C	0	genome.wustl.edu	37	10	64958355	64958355	+	Silent	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	10	64958355	64958355	T	C	SNP	JMJD1C	ENST00000399262	human	ensembl	74_37	-1	known	silent	c.5409	p.K1803	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD1C	HGNC	ENSG00000171988				30	0	0.00	19	3	13.64
KAT6A	0	genome.wustl.edu	37	8	41836223	41836223	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	8	41836223	41836223	A	G	SNP	KAT6A	ENST00000265713	human	ensembl	74_37	-1	known	missense	c.980	p.I327T	1.000	superfamily_Znf_FYVE_PHD	pfam_MOZ_SAS,pfam_Znf_PHD-finger,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6A	HGNC	ENSG00000083168	tier1	-	-	71	0	0.00	92	23	19.83
KCNA5	0	genome.wustl.edu	37	12	5154910	5154910	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	5154910	5154910	G	T	SNP	KCNA5	ENST00000252321	human	ensembl	74_37	+1	known	missense	c.1597	p.A533S	0.998	prints_K_chnl_volt-dep_Kv1.5	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_PKD1_2_channel,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.5,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA5	HGNC	ENSG00000130037	tier1	-	-	59	0	0.00	69	4	5.48
KDM4B	0	genome.wustl.edu	37	19	5144079	5144079	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	19	5144079	5144079	C	T	SNP	KDM4B	ENST00000159111	human	ensembl	74_37	+1	known	silent	c.2652	p.H884	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4B	HGNC	ENSG00000127663	tier1	-	-	72	0	0.00	71	10	12.35
KIAA0319	0	genome.wustl.edu	37	6	24569066	24569066	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	6	24569066	24569066	C	T	SNP	KIAA0319	ENST00000378214	human	ensembl	74_37	-1	known	missense	c.2083	p.V695M	0.998	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_Fibronectin_type3,smart_PKD/Chitinase_dom	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_MANSC_N,smart_Fibronectin_type3,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319	HGNC	ENSG00000137261	tier1	-	-	60	0	0.00	55	4	6.78
KIF11	0	genome.wustl.edu	37	10	94373310	94373310	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	10	94373310	94373310	T	A	SNP	KIF11	ENST00000260731	human	ensembl	74_37	+1	known	missense	c.966	p.D322E	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF11	HGNC	ENSG00000138160	tier1	-	-	111	0	0.00	90	19	17.43
KIF16B	0	genome.wustl.edu	37	20	16474995	16474995	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	20	16474995	16474995	C	T	SNP	KIF16B	ENST00000408042	human	ensembl	74_37	-1	known	missense	c.1243	p.V415I	1.000	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF16B	HGNC	ENSG00000089177	tier1	-	-	78	0	0.00	102	19	15.70
KLB	0	genome.wustl.edu	37	4	39439377	39439377	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	4	39439377	39439377	G	A	SNP	KLB	ENST00000257408	human	ensembl	74_37	+1	known	missense	c.1367	p.G456D	1.000	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	KLB	HGNC	ENSG00000134962	tier1	-	-	89	0	0.00	69	5	6.76
KMT2B	0	genome.wustl.edu	37	19	36218097	36218097	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	19	36218097	36218097	C	T	SNP	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	silent	c.4044	p.N1348	0.752	pirsf_MeTrfase_trithorax,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333	tier1	-	-	48	0	0.00	36	12	25.00
KPNA7	0	genome.wustl.edu	37	7	98805040	98805040	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	7	98805040	98805040	C	T	SNP	KPNA7	ENST00000327442	human	ensembl	74_37	-1	known	missense	c.50	p.R17Q	0.910	pfam_Importin-a_IBB,superfamily_ARM-type_fold,pfscan_Importin-a_IBB	pfam_Armadillo,pfam_HEAT,pfam_Importin-a_IBB,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA7	HGNC	ENSG00000185467	tier1	-	-	58	0	0.00	226	24	9.60
KREMEN1	0	genome.wustl.edu	37	22	29533368	29533368	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	22	29533368	29533368	T	G	SNP	KREMEN1	ENST00000327813	human	ensembl	74_37	+1	known	missense	c.670	p.S224A	0.995	pirsf_Kremen,pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pirsf_Kremen,pfam_Kringle,pfam_WSC_carb-bd,pfam_CUB_dom,superfamily_Kringle-like,superfamily_CUB_dom,superfamily_Scorpion_toxin-like,smart_Kringle,smart_WSC_carb-bd_subgr,smart_CUB_dom,pfscan_CUB_dom,pfscan_Kringle,pfscan_WSC_carb-bd	-	no_errors	KREMEN1	HGNC	ENSG00000183762	tier1	-	-	54	0	0.00	50	16	24.24
LAMB1	0	genome.wustl.edu	37	7	107570010	107570010	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	7	107570010	107570010	A	G	SNP	LAMB1	ENST00000222399	human	ensembl	74_37	-1	known	missense	c.4592	p.M1531T	1.000	NULL	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Prefoldin,superfamily_t-SNARE,superfamily_P-loop_NTPase,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB1	HGNC	ENSG00000091136	tier1	-	-	34	0	0.00	18	15	45.45
LIG1	0	genome.wustl.edu	37	19	48630558	48630558	+	Silent	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	19	48630558	48630558	G	A	SNP	LIG1	ENST00000263274	human	ensembl	74_37	-1	known	silent	c.1980	p.F660	1.000	pfam_DNA_ligase_ATP-dep_cent,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_DNA_ligase_ATP-dep_C,superfamily_DNA_ligase_ATP-dep_N,superfamily_NA-bd_OB-fold,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	-	no_errors	LIG1	HGNC	ENSG00000105486	tier1	-	-	51	0	0.00	35	39	52.70
LILRA6	0	genome.wustl.edu	37	19	54743803	54743803	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	19	54743803	54743803	G	A	SNP	LILRA6	ENST00000419410	human	ensembl	74_37	-1	known	missense	c.1283	p.P428L	0.001	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRA6	HGNC	ENSG00000244482	tier1	-	-	50	0	0.00	32	31	49.21
LIN9	0	genome.wustl.edu	37	1	226475417	226475417	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	226475417	226475417	G	A	SNP	LIN9	ENST00000328205	human	ensembl	74_37	-1	known	missense	c.394	p.P132S	1.000	NULL	pfam_LIN-9/ALY1	-	no_errors	LIN9	HGNC	ENSG00000183814	tier1	-	-	90	0	0.00	56	19	25.33
LINC00922	0	genome.wustl.edu	37	16	65319330	65319330	+	RNA	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	16	65319330	65319330	G	A	SNP	LINC00922	ENST00000564041	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00922	HGNC	ENSG00000261742	tier1	-	-	39	0	0.00	21	11	34.38
LMF1	0	genome.wustl.edu	37	16	919016	919016	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	16	919016	919016	T	C	SNP	LMF1	ENST00000262301	human	ensembl	74_37	-1	known	missense	c.1457	p.K486R	1.000	pfam_LMF	pfam_LMF	-	no_errors	LMF1	HGNC	ENSG00000103227	tier1	-	-	46	0	0.00	49	4	7.55
LOC101928921	0	genome.wustl.edu	37	11	78807960	78807961	+	RNA	INS	-	-	GC			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	11	78807960	78807961	-	GC	INS	LOC101928921	ENST00000526091	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CTD-2337I7.1	Clone_based_vega_gene	ENSG00000255345	tier1			15	0	0.00	21	3	12.50
LRP5	0	genome.wustl.edu	37	11	68157387	68157387	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	11	68157387	68157387	T	C	SNP	LRP5	ENST00000294304	human	ensembl	74_37	+1	known	missense	c.1451	p.I484T	1.000	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP5	HGNC	ENSG00000162337	tier1	-	-	58	0	0.00	49	17	25.76
LRRC63	0	genome.wustl.edu	37	13	46802808	46802808	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	13	46802808	46802808	G	T	SNP	LRRC63	ENST00000446175	human	ensembl	74_37	+1	known	missense	c.772	p.V258L	0.001	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC63	HGNC	ENSG00000173988	tier1	-	-	61	0	0.00	67	4	5.63
LRRIQ1	0	genome.wustl.edu	37	12	85546923	85546923	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	85546923	85546923	G	T	SNP	LRRIQ1	ENST00000393217	human	ensembl	74_37	+1	known	missense	c.4541	p.R1514I	1.000	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,smart_Leu-rich_rpt_typical-subtyp,pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ1	HGNC	ENSG00000133640	tier1	-	-	99	0	0.00	57	18	24.00
MAML1	0	genome.wustl.edu	37	5	179192504	179192504	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	5	179192504	179192504	G	A	SNP	MAML1	ENST00000292599	human	ensembl	74_37	+1	known	missense	c.493	p.D165N	0.998	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML1	HGNC	ENSG00000161021				49	0	0.00	47	3	6.00
MAMLD1	0	genome.wustl.edu	37	X	149680831	149680831	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	X	149680831	149680831	G	T	SNP	MAMLD1	ENST00000432680	human	ensembl	74_37	+1	known	missense	c.2485	p.A829S	0.000	NULL	NULL	-	no_errors	MAMLD1	HGNC	ENSG00000013619	tier1	-	-	47	0	0.00	64	4	5.88
MAP7	0	genome.wustl.edu	37	6	136667017	136667017	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	6	136667017	136667017	C	A	SNP	MAP7	ENST00000454590	human	ensembl	74_37	-1	known	missense	c.2282	p.G761V	1.000	NULL	pfam_MAP7	-	no_errors	MAP7	HGNC	ENSG00000135525	tier1	-	-	76	0	0.00	40	4	9.09
MIR134	0	genome.wustl.edu	37	14	101521055	101521055	+	RNA	SNP	T	T	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	14	101521055	101521055	T	A	SNP	MIR134	ENST00000385258	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.291	-	-	-	no_errors	MIR134	HGNC	ENSG00000207993	tier1	-	-	55	0	0.00	49	4	7.55
MIR409	0	genome.wustl.edu	37	14	101531679	101531679	+	RNA	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	14	101531679	101531679	C	T	SNP	MIR409	ENST00000362237	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR409	HGNC	ENSG00000199107	tier1	-	-	90	0	0.00	42	13	23.64
MPZL1	0	genome.wustl.edu	37	1	167741701	167741701	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	167741701	167741701	A	T	SNP	MPZL1	ENST00000359523	human	ensembl	74_37	+1	known	missense	c.448	p.I150F	0.996	pfam_Ig_V-set,smart_Ig_sub,prints_Myelin_P0	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom,prints_Myelin_P0	-	no_errors	MPZL1	HGNC	ENSG00000197965	tier1	-	-	48	0	0.00	52	5	8.77
MS4A10	0	genome.wustl.edu	37	11	60565933	60565933	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	11	60565933	60565933	C	T	SNP	MS4A10	ENST00000308287	human	ensembl	74_37	+1	known	missense	c.668	p.P223L	0.012	NULL	pfam_CD20-like	-	no_errors	MS4A10	HGNC	ENSG00000172689	tier1	-	-	69	0	0.00	51	16	23.88
MT-TV	0	genome.wustl.edu	37	MT	1605	1605	+	RNA	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	MT	1605	1605	A	G	SNP	MT-TV	ENST00000387342	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-TV	HGNC	ENSG00000210077	tier1	-	-	26	0	0.00	7	4	36.36
MTR	0	genome.wustl.edu	37	1	237057959	237057959	+	RNA	DEL	T	T	-			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	237057959	237057959	T	-	DEL	MTR	ENST00000470570	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MTR	HGNC	ENSG00000116984	tier1			17	0	0.00	4	4	50.00
MYH1	0	genome.wustl.edu	37	17	10415473	10415473	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	17	10415473	10415473	G	C	SNP	MYH1	ENST00000226207	human	ensembl	74_37	-1	known	missense	c.1184	p.S395C	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH1	HGNC	ENSG00000109061	tier1	-	-	96	0	0.00	95	20	17.39
MYH2	0	genome.wustl.edu	37	17	10426976	10426976	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	17	10426976	10426976	A	T	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	missense	c.5309	p.M1770K	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414	tier1	-	-	111	0	0.00	63	41	39.42
MYO15A	0	genome.wustl.edu	37	17	18023165	18023165	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	17	18023165	18023165	G	A	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.1051	p.A351T	0.000	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536	tier1	-	-	88	0	0.00	73	27	27.00
MYO1D	0	genome.wustl.edu	37	17	30921477	30921477	+	RNA	SNP	G	G	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	17	30921477	30921477	G	C	SNP	MYO1D	ENST00000580547	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	MYO1D	HGNC	ENSG00000176658	tier1	-	-	41	0	0.00	34	8	19.05
MYO5B	0	genome.wustl.edu	37	18	47402068	47402068	+	Nonsense_Mutation	SNP	T	T	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	18	47402068	47402068	T	A	SNP	MYO5B	ENST00000285039	human	ensembl	74_37	-1	known	nonsense	c.3526	p.K1176*	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5B	HGNC	ENSG00000167306				69	0	0.00	38	2	5.00
MYOCD	0	genome.wustl.edu	37	17	12656133	12656133	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	17	12656133	12656133	C	T	SNP	MYOCD	ENST00000425538	human	ensembl	74_37	+1	known	silent	c.1528	p.L510	0.563	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MYOCD	HGNC	ENSG00000141052	tier1	-	-	43	0	0.00	58	4	6.45
N4BP2L2	0	genome.wustl.edu	37	13	33091950	33091950	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	13	33091950	33091950	T	C	SNP	N4BP2L2	ENST00000267068	human	ensembl	74_37	-1	known	missense	c.1741	p.N581D	0.000	NULL	pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase	-	no_errors	N4BP2L2	HGNC	ENSG00000244754				69	0	0.00	53	3	5.36
NAALADL2	0	genome.wustl.edu	37	3	175473128	175473128	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	3	175473128	175473128	G	A	SNP	NAALADL2	ENST00000454872	human	ensembl	74_37	+1	known	missense	c.2111	p.R704H	0.815	superfamily_TFR-like_dimer_dom	superfamily_TFR-like_dimer_dom	-	no_errors	NAALADL2	HGNC	ENSG00000177694				44	0	0.00	41	4	8.89
NAPSA	0	genome.wustl.edu	37	19	50863114	50863114	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	19	50863114	50863114	G	T	SNP	NAPSA	ENST00000253719	human	ensembl	74_37	-1	known	missense	c.674	p.P225H	0.993	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	-	no_errors	NAPSA	HGNC	ENSG00000131400				78	0	0.00	60	4	6.25
NCDN	0	genome.wustl.edu	37	1	36028933	36028933	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	36028933	36028933	G	A	SNP	NCDN	ENST00000356090	human	ensembl	74_37	+1	known	missense	c.1516	p.D506N	0.465	NULL	NULL	-	no_errors	NCDN	HGNC	ENSG00000020129	tier1	-	-	38	0	0.00	28	18	39.13
NDST4	0	genome.wustl.edu	37	4	115997643	115997643	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	4	115997643	115997643	G	T	SNP	NDST4	ENST00000264363	human	ensembl	74_37	-1	known	missense	c.550	p.L184I	0.996	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST4	HGNC	ENSG00000138653	tier1	-	-	74	0	0.00	42	9	17.65
NDUFAF3	0	genome.wustl.edu	37	3	49059963	49059963	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	3	49059963	49059963	C	T	SNP	NDUFAF3	ENST00000326925	human	ensembl	74_37	+1	known	nonsense	c.262	p.Q88*	1.000	pfam_NADH_Ub_cplx-1_asu_assmbl-fac3,superfamily_NADH_Ub_cplx-1_asu_assmbl-fac3	pfam_NADH_Ub_cplx-1_asu_assmbl-fac3,superfamily_NADH_Ub_cplx-1_asu_assmbl-fac3	-	no_errors	NDUFAF3	HGNC	ENSG00000178057				38	0	0.00	35	2	5.41
NFYB	0	genome.wustl.edu	37	12	104515062	104515062	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	104515062	104515062	G	T	SNP	NFYB	ENST00000240055	human	ensembl	74_37	-1	known	missense	c.467	p.T156K	1.000	superfamily_Histone-fold	pfam_CBFA_NFYB_domain,pfam_Histone_core_D,superfamily_Histone-fold,prints_Transcrpt_fac_NFYB/HAP3	-	no_errors	NFYB	HGNC	ENSG00000120837	tier1	-	-	42	0	0.00	46	4	8.00
NOTCH2	0	genome.wustl.edu	37	1	120512304	120512304	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	120512304	120512304	C	T	SNP	NOTCH2	ENST00000256646	human	ensembl	74_37	-1	known	missense	c.938	p.G313D	1.000	pirsf_Notch,pfam_EGF-like_Ca-bd_dom,pfam_EGF_extracell,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,pfam_EGF_extracell,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_2,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH2	HGNC	ENSG00000134250	tier1	-	-	79	0	0.00	45	13	22.41
NRIP1	0	genome.wustl.edu	37	21	16339180	16339180	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	21	16339180	16339180	C	T	SNP	NRIP1	ENST00000318948	human	ensembl	74_37	-1	known	missense	c.1334	p.C445Y	1.000	NULL	NULL	-	no_errors	NRIP1	HGNC	ENSG00000180530	tier1	-	-	58	0	0.00	59	4	6.35
NSMCE1	0	genome.wustl.edu	37	16	27237089	27237089	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	16	27237089	27237089	G	A	SNP	NSMCE1	ENST00000361439	human	ensembl	74_37	-1	known	missense	c.679	p.R227C	0.044	pfam_Znf_RING-like,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Znf_RING	pfam_Nse1,pfam_Znf_RING-like,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Znf_RING	-	no_errors	NSMCE1	HGNC	ENSG00000169189	tier1	-	-	78	0	0.00	79	24	23.30
NUAK1	0	genome.wustl.edu	37	12	106460744	106460744	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	106460744	106460744	G	A	SNP	NUAK1	ENST00000261402	human	ensembl	74_37	-1	known	missense	c.1822	p.L608F	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NUAK1	HGNC	ENSG00000074590	tier1	-	-	83	0	0.00	69	17	19.77
OR2AG2	0	genome.wustl.edu	37	11	6790090	6790090	+	Silent	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	11	6790090	6790090	G	T	SNP	OR2AG2	ENST00000338569	human	ensembl	74_37	-1	known	silent	c.99	p.I33	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2AG2	HGNC	ENSG00000188124	tier1	-	-	85	0	0.00	36	25	40.98
OR2T3	0	genome.wustl.edu	37	1	248636827	248636827	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	248636827	248636827	G	A	SNP	OR2T3	ENST00000359594	human	ensembl	74_37	+1	known	missense	c.176	p.R59H	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T3	HGNC	ENSG00000196539	tier1	-	-	44	0	0.00	37	11	22.92
OSBPL9	0	genome.wustl.edu	37	1	52253063	52253063	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	52253063	52253063	A	C	SNP	OSBPL9	ENST00000371710	human	ensembl	74_37	+1	known	missense	c.2093	p.D698A	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL9	HGNC	ENSG00000117859	tier1	-	-	57	0	0.00	38	12	24.00
OTOG	0	genome.wustl.edu	37	11	17580138	17580138	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	11	17580138	17580138	C	T	SNP	OTOG	ENST00000399391	human	ensembl	74_37	+1	known	silent	c.1086	p.H362	0.953	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_AbfB,pfam_TIL_dom,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom	-	no_errors	OTOG	HGNC	ENSG00000188162	tier1	-	-	42	0	0.00	34	8	19.05
PAPPA2	0	genome.wustl.edu	37	1	176679139	176679139	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	176679139	176679139	A	G	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	missense	c.3478	p.M1160V	0.006	NULL	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	tier1	-	-	48	0	0.00	60	4	6.25
PCDH12	0	genome.wustl.edu	37	5	141335614	141335614	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	5	141335614	141335614	C	T	SNP	PCDH12	ENST00000231484	human	ensembl	74_37	-1	known	silent	c.1803	p.A601	0.000	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH12	HGNC	ENSG00000113555	tier1	-	-	101	0	0.00	118	33	21.85
PCDHA10	0	genome.wustl.edu	37	5	140235896	140235896	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	5	140235896	140235896	G	A	SNP	PCDHA10	ENST00000307360	human	ensembl	74_37	+1	known	missense	c.263	p.R88Q	1.000	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA10	HGNC	ENSG00000250120	tier1	-	-	165	0	0.00	145	43	22.87
PCDHB12	0	genome.wustl.edu	37	5	140589663	140589663	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	5	140589663	140589663	C	T	SNP	PCDHB12	ENST00000239450	human	ensembl	74_37	+1	known	missense	c.1184	p.S395F	0.001	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB12	HGNC	ENSG00000120328	tier1	-	-	154	0	0.00	92	30	24.59
PDZD2	0	genome.wustl.edu	37	5	32057775	32057775	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	5	32057775	32057775	G	C	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.1915	p.D639H	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	tier1	-	-	48	0	0.00	64	5	7.25
PEX1	0	genome.wustl.edu	37	7	92135590	92135590	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	7	92135590	92135590	C	T	SNP	PEX1	ENST00000248633	human	ensembl	74_37	-1	known	silent	c.1872	p.V624	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_ATPase_AAA_core,pfam_Peroxisome_synth_fac_1_a/b,pfam_PEX-1N,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase	-	no_errors	PEX1	HGNC	ENSG00000127980				62	0	0.00	65	4	5.80
PIGS	0	genome.wustl.edu	37	17	26881311	26881311	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	17	26881311	26881311	G	A	SNP	PIGS	ENST00000308360	human	ensembl	74_37	-1	known	missense	c.1595	p.P532L	1.000	pfam_PtdIno-glycan_biosynth_class_S	pfam_PtdIno-glycan_biosynth_class_S	-	no_errors	PIGS	HGNC	ENSG00000087111				57	0	0.00	55	3	5.17
PKD1	0	genome.wustl.edu	37	16	2157788	2157788	+	RNA	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	16	2157788	2157788	G	A	SNP	PKD1	ENST00000473780	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	PKD1	HGNC	ENSG00000008710	tier1	-	-	74	0	0.00	66	40	37.74
PKD1L3	0	genome.wustl.edu	37	16	71976822	71976822	+	RNA	SNP	A	A	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	16	71976822	71976822	A	T	SNP	PKD1L3	ENST00000335106	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.165	-	-	-	no_errors	PKD1L3	HGNC	ENSG00000187008	tier1	-	-	130	0	0.00	84	44	34.38
PKIA	0	genome.wustl.edu	37	8	79514046	79514046	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	8	79514046	79514046	C	A	SNP	PKIA	ENST00000352966	human	ensembl	74_37	+1	known	missense	c.221	p.S74Y	0.996	pfam_cAMP_dep_PKI,pirsf_cAMP_dep_PKI	pfam_cAMP_dep_PKI,pirsf_cAMP_dep_PKI	-	no_errors	PKIA	HGNC	ENSG00000171033	tier1	-	-	100	0	0.00	66	17	20.48
PLXNA2	0	genome.wustl.edu	37	1	208227883	208227883	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	208227883	208227883	C	A	SNP	PLXNA2	ENST00000367033	human	ensembl	74_37	-1	known	missense	c.2739	p.Q913H	1.000	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA2	HGNC	ENSG00000076356	tier1	-	-	77	0	0.00	50	11	18.03
POC5	0	genome.wustl.edu	37	5	75001600	75001601	+	Frame_Shift_Ins	INS	-	-	CA			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	5	75001600	75001601	-	CA	INS	POC5	ENST00000428202	human	ensembl	74_37	-1	known	frame_shift_ins	c.236_235	p.E79fs	0.000:0.013	NULL	NULL	-	no_errors	POC5	HGNC	ENSG00000152359	tier1			121	0	0.00	98	11	10.09
POLR2B	0	genome.wustl.edu	37	4	57845161	57845161	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	4	57845161	57845161	G	T	SNP	POLR2B	ENST00000314595	human	ensembl	74_37	+1	known	missense	c.10	p.A4S	1.000	NULL	pfam_DNA-dir_RNA_pol_su2_6,pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_2,pfam_RNA_pol_Rpb2_7,pfam_RNA_pol_Rpb2_4,pfam_RNA_pol_Rpb2_3,pfam_RNA_pol_Rpb2_5	-	no_errors	POLR2B	HGNC	ENSG00000047315	tier1	-	-	118	0	0.00	67	5	6.94
POM121L12	0	genome.wustl.edu	37	7	53103932	53103932	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	7	53103932	53103932	G	T	SNP	POM121L12	ENST00000408890	human	ensembl	74_37	+1	known	missense	c.568	p.A190S	0.000	NULL	NULL	-	no_errors	POM121L12	HGNC	ENSG00000221900				54	0	0.00	73	4	5.19
POP1	0	genome.wustl.edu	37	8	99139843	99139843	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	8	99139843	99139843	C	T	SNP	POP1	ENST00000349693	human	ensembl	74_37	+1	known	nonsense	c.163	p.R55*	0.035	NULL	pfam_RNase_P/MRP_POP1,pfam_POPLD	-	no_errors	POP1	HGNC	ENSG00000104356				101	0	0.00	64	4	5.88
PPIL3	0	genome.wustl.edu	37	2	201753762	201753762	+	RNA	SNP	C	C	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	2	201753762	201753762	C	A	SNP	PPIL3	ENST00000465823	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PPIL3	HGNC	ENSG00000240344	tier1	-	-	44	0	0.00	46	8	14.81
PPP1CC	0	genome.wustl.edu	37	12	111157945	111157945	+	Silent	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	111157945	111157945	G	A	SNP	PPP1CC	ENST00000340766	human	ensembl	74_37	-1	known	silent	c.1008	p.Y336	1.000	NULL	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP1CC	HGNC	ENSG00000186298	tier1	-	-	69	0	0.00	51	4	7.14
PRPF38B	0	genome.wustl.edu	37	1	109235463	109235463	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	109235463	109235463	G	A	SNP	PRPF38B	ENST00000370025	human	ensembl	74_37	+1	known	missense	c.250	p.E84K	1.000	pfam_PRP38	pfam_PRP38	-	no_errors	PRPF38B	HGNC	ENSG00000134186				45	0	0.00	31	2	6.06
PRRC2B	0	genome.wustl.edu	37	9	134357827	134357827	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	9	134357827	134357827	A	G	SNP	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	missense	c.5053	p.T1685A	0.979	NULL	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723				40	0	0.00	32	3	8.57
PSAT1	0	genome.wustl.edu	37	9	80919746	80919746	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	9	80919746	80919746	G	T	SNP	PSAT1	ENST00000376588	human	ensembl	74_37	+1	known	missense	c.287	p.G96V	0.209	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,pirsf_Pser_aminoTfrase,tigrfam_Pser_aminoTfrase_subgr	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,pirsf_Pser_aminoTfrase,tigrfam_Pser_aminoTfrase_subgr	-	no_errors	PSAT1	HGNC	ENSG00000135069				57	0	0.00	44	4	8.33
PSD	0	genome.wustl.edu	37	10	104173823	104173823	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	10	104173823	104173823	G	C	SNP	PSD	ENST00000020673	human	ensembl	74_37	-1	known	missense	c.1256	p.S419C	1.000	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD	HGNC	ENSG00000059915	tier1	-	-	141	0	0.00	112	32	22.22
PSIP1	0	genome.wustl.edu	37	9	15472611	15472612	+	RNA	INS	-	-	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	9	15472611	15472612	-	A	INS	PSIP1	ENST00000495873	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	PSIP1	HGNC	ENSG00000164985	tier1			37	0	0.00	30	4	11.76
PTGER3	0	genome.wustl.edu	37	1	71477991	71477991	+	Silent	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	71477991	71477991	G	A	SNP	PTGER3	ENST00000354608	human	ensembl	74_37	-1	known	silent	c.1074	p.C358	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srbc,pfscan_GPCR_Rhodpsn_7TM,prints_Prostglndn_EP3_rcpt,prints_Prostanoid_rcpt,prints_EP3_rcpt_2,prints_Prostglndn_DP_rcpt,prints_GPCR_Rhodpsn,prints_Thbox_rcpt	-	no_errors	PTGER3	HGNC	ENSG00000050628	tier1	-	-	57	0	0.00	48	4	7.69
PTPRO	0	genome.wustl.edu	37	12	15673162	15673162	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	15673162	15673162	T	C	SNP	PTPRO	ENST00000281171	human	ensembl	74_37	+1	known	missense	c.1807	p.Y603H	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRO	HGNC	ENSG00000151490				33	0	0.00	48	4	7.69
PVRL3	0	genome.wustl.edu	37	3	110852683	110852683	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	3	110852683	110852683	G	T	SNP	PVRL3	ENST00000485303	human	ensembl	74_37	+1	known	missense	c.1271	p.G424V	1.000	NULL	pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	PVRL3	HGNC	ENSG00000177707				60	0	0.00	75	4	5.06
PXK	0	genome.wustl.edu	37	3	58376920	58376920	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	3	58376920	58376920	G	T	SNP	PXK	ENST00000356151	human	ensembl	74_37	+1	known	missense	c.513	p.Q171H	1.000	superfamily_Kinase-like_dom,pfscan_Prot_kinase_dom	pfam_Phox,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Phox,superfamily_Kinase-like_dom,smart_Phox,pfscan_Phox,pfscan_WH2_dom,pfscan_Prot_kinase_dom	-	no_errors	PXK	HGNC	ENSG00000168297	tier1	-	-	70	0	0.00	59	4	6.35
RABGGTB	0	genome.wustl.edu	37	1	76257240	76257240	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	76257240	76257240	A	G	SNP	RABGGTB	ENST00000319942	human	ensembl	74_37	+1	known	missense	c.563	p.E188G	1.000	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_Prenyltrans,superfamily_Terpenoid_cyclase/PrenylTrfase	-	no_errors	RABGGTB	HGNC	ENSG00000137955	tier1	-	-	52	0	0.00	61	4	6.15
RANBP2	0	genome.wustl.edu	37	2	109367786	109367786	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	2	109367786	109367786	T	C	SNP	RANBP2	ENST00000283195	human	ensembl	74_37	+1	known	missense	c.1340	p.L447S	0.027	NULL	pfam_Ran_bind_dom,pfam_Znf_RanBP2,pfam_IR1-M,pfam_Cyclophilin-like_PPIase_dom,pfam_TPR_1,superfamily_Cyclophilin-like_PPIase_dom,smart_TPR_repeat,smart_Ran_bind_dom,smart_Znf_RanBP2,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RanBP2,pfscan_Cyclophilin-like_PPIase_dom,pfscan_Ran_bind_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	RANBP2	HGNC	ENSG00000153201	tier1	-	-	455	0	0.00	336	94	21.81
RBM5	0	genome.wustl.edu	37	3	50129549	50129549	+	Silent	SNP	C	C	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	3	50129549	50129549	C	A	SNP	RBM5	ENST00000347869	human	ensembl	74_37	+1	known	silent	c.91	p.R31	0.620	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM5	HGNC	ENSG00000003756				98	0	0.00	71	4	5.26
RBMX2	0	genome.wustl.edu	37	X	129536265	129536265	+	Silent	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	X	129536265	129536265	T	C	SNP	RBMX2	ENST00000305536	human	ensembl	74_37	+1	known	silent	c.42	p.N14	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMX2	HGNC	ENSG00000134597	tier1	-	-	68	0	0.00	25	14	35.90
REG3A	0	genome.wustl.edu	37	2	79385795	79385795	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	2	79385795	79385795	T	-	DEL	REG3A	ENST00000305165	human	ensembl	74_37	-1	known	frame_shift_del	c.177	p.K59fs	0.021	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	REG3A	HGNC	ENSG00000172016	tier1			36	0	0.00	35	2	5.41
RHPN1-AS1	0	genome.wustl.edu	37	8	144450249	144450249	+	RNA	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	8	144450249	144450249	G	T	SNP	RHPN1-AS1	ENST00000518049	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RHPN1-AS1	HGNC	ENSG00000254389				62	0	0.00	75	4	5.06
RIMKLA	0	genome.wustl.edu	37	1	42865151	42865151	+	Silent	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	42865151	42865151	G	A	SNP	RIMKLA	ENST00000431473	human	ensembl	74_37	+1	known	silent	c.240	p.Q80	1.000	tigrfam_RpS6_RimK/Lys_biosynth_LsyX	pfam_ATP-grasp_RimK-type,pfam_GSHS_ATP-bd,pfam_ATP-grasp_DUF201-type,pfscan_ATP-grasp,tigrfam_RpS6_RimK/Lys_biosynth_LsyX	-	no_errors	RIMKLA	HGNC	ENSG00000177181	tier1	-	-	45	0	0.00	52	4	7.14
RN7SL545P	0	genome.wustl.edu	37	15	22706891	22706891	+	RNA	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	15	22706891	22706891	C	T	SNP	RN7SL545P	ENST00000495815	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.771	-	-	-	no_errors	RN7SL545P	HGNC	ENSG00000241034	tier1	-	-	30	0	0.00	32	7	17.95
RPGRIP1L	0	genome.wustl.edu	37	16	53652936	53652936	+	Splice_Site	SNP	C	C	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	16	53652936	53652936	C	A	SNP	RPGRIP1L	ENST00000379925	human	ensembl	74_37	-1	known	splice_site	c.3616+1	e23+1	1.000	-	-	-	no_errors	RPGRIP1L	HGNC	ENSG00000103494	tier1	-	-	59	0	0.00	54	4	6.90
RTL1	0	genome.wustl.edu	37	14	101349583	101349583	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	14	101349583	101349583	C	T	SNP	RTL1	ENST00000534062	human	ensembl	74_37	-1	known	missense	c.1543	p.E515K	0.102	superfamily_Peptidase_aspartic_dom	pfam_Retrotrans_gag_dom,superfamily_Peptidase_aspartic_dom	-	no_errors	RTL1	HGNC	ENSG00000254656	tier1	-	-	63	0	0.00	68	14	17.07
RYR2	0	genome.wustl.edu	37	1	237664074	237664074	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	237664074	237664074	G	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.2261	p.S754I	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	69	0	0.00	47	4	7.84
SDK2	0	genome.wustl.edu	37	17	71364724	71364724	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	17	71364724	71364724	G	C	SNP	SDK2	ENST00000392650	human	ensembl	74_37	-1	known	missense	c.4989	p.F1663L	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK2	HGNC	ENSG00000069188				32	0	0.00	37	2	5.13
SEMA3A	0	genome.wustl.edu	37	7	83634710	83634710	+	Silent	SNP	G	G	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	7	83634710	83634710	G	C	SNP	SEMA3A	ENST00000265362	human	ensembl	74_37	-1	known	silent	c.1305	p.V435	0.982	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3A	HGNC	ENSG00000075213	tier1	-	-	85	0	0.00	81	40	33.06
SFXN2	0	genome.wustl.edu	37	10	104489519	104489519	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	10	104489519	104489519	G	A	SNP	SFXN2	ENST00000369893	human	ensembl	74_37	+1	known	missense	c.547	p.A183T	1.000	pfam_Mtc,tigrfam_Mtc	pfam_Mtc,tigrfam_Mtc	-	no_errors	SFXN2	HGNC	ENSG00000156398	tier1	-	-	56	0	0.00	48	14	22.58
SGCZ	0	genome.wustl.edu	37	8	14412433	14412433	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	8	14412433	14412433	C	G	SNP	SGCZ	ENST00000382080	human	ensembl	74_37	-1	known	missense	c.42	p.M14I	1.000	NULL	pfam_Sarcoglycan	-	no_errors	SGCZ	HGNC	ENSG00000185053	tier1	-	-	64	0	0.00	55	14	20.29
SGK3	0	genome.wustl.edu	37	8	67716673	67716673	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	8	67716673	67716673	T	A	SNP	SGK3	ENST00000345714	human	ensembl	74_37	+1	known	missense	c.244	p.F82I	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Phox,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_Phox,smart_Phox,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Phox,pfscan_Prot_kinase_dom	-	no_errors	SGK3	HGNC	ENSG00000104205	tier1	-	-	202	0	0.00	169	47	21.76
SHANK2	0	genome.wustl.edu	37	11	70332599	70332599	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	11	70332599	70332599	G	T	SNP	SHANK2	ENST00000338508	human	ensembl	74_37	-1	known	missense	c.3802	p.Q1268K	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK2	HGNC	ENSG00000162105	tier1	-	-	63	0	0.00	195	16	7.58
SIN3A	0	genome.wustl.edu	37	15	75693273	75693273	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	15	75693273	75693273	G	T	SNP	SIN3A	ENST00000360439	human	ensembl	74_37	-1	known	missense	c.1535	p.P512H	1.000	pfam_PAH,superfamily_PAH	pfam_PAH,pfam_HDAC_interact,superfamily_PAH,smart_HDAC_interact	-	no_errors	SIN3A	HGNC	ENSG00000169375	tier1	-	-	63	0	0.00	72	5	6.49
SLC16A14	0	genome.wustl.edu	37	2	230910801	230910801	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	2	230910801	230910801	C	T	SNP	SLC16A14	ENST00000295190	human	ensembl	74_37	-1	known	silent	c.1041	p.S347	0.293	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A14	HGNC	ENSG00000163053				94	0	0.00	68	4	5.56
SLC20A2	0	genome.wustl.edu	37	8	42329774	42329774	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	8	42329774	42329774	C	T	SNP	SLC20A2	ENST00000342228	human	ensembl	74_37	-1	known	silent	c.135	p.R45	1.000	pfam_Phos_transporter	pfam_Phos_transporter	-	no_errors	SLC20A2	HGNC	ENSG00000168575				59	0	0.00	73	4	5.06
SLC7A14	0	genome.wustl.edu	37	3	170198523	170198523	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	3	170198523	170198523	C	T	SNP	SLC7A14	ENST00000231706	human	ensembl	74_37	-1	known	missense	c.1548	p.M516I	1.000	NULL	pfam_AA-permease/SLC12A_dom	-	no_errors	SLC7A14	HGNC	ENSG00000013293	tier1	-	-	39	0	0.00	344	21	5.75
SLC8A2	0	genome.wustl.edu	37	19	47935592	47935592	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	19	47935592	47935592	G	A	SNP	SLC8A2	ENST00000236877	human	ensembl	74_37	-1	known	missense	c.2221	p.P741S	1.000	tigrfam_Na_Ca_Ex	pfam_Calx_beta,pfam_NaCa_Exmemb,smart_Calx_beta,prints_Na_Ca_Ex,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A2	HGNC	ENSG00000118160				72	0	0.00	76	4	5.00
SLX4IP	0	genome.wustl.edu	37	20	10579382	10579382	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	20	10579382	10579382	A	G	SNP	SLX4IP	ENST00000334534	human	ensembl	74_37	+1	known	missense	c.298	p.R100G	0.000	NULL	NULL	-	no_errors	SLX4IP	HGNC	ENSG00000149346	tier1	-	-	60	0	0.00	66	13	16.46
SMC1B	0	genome.wustl.edu	37	22	45809379	45809379	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	22	45809379	45809379	A	G	SNP	SMC1B	ENST00000357450	human	ensembl	74_37	-1	known	missense	c.70	p.F24L	1.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,superfamily_t-SNARE,smart_SMC_hinge	-	no_errors	SMC1B	HGNC	ENSG00000077935				18	0	0.00	36	4	9.76
SMEK2	0	genome.wustl.edu	37	2	55825825	55825825	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	2	55825825	55825825	A	T	SNP	SMEK2	ENST00000272313	human	ensembl	74_37	-1	known	missense	c.648	p.D216E	1.000	pfam_DUF625,superfamily_ARM-type_fold	pfam_DUF625,superfamily_ARM-type_fold	-	no_errors	SMEK2	HGNC	ENSG00000138041				75	0	0.00	67	4	5.63
SNAP91	0	genome.wustl.edu	37	6	84269886	84269886	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	6	84269886	84269886	C	T	SNP	SNAP91	ENST00000369694	human	ensembl	74_37	-1	known	silent	c.2568	p.P856	0.003	NULL	pfam_ANTH_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	-	no_errors	SNAP91	HGNC	ENSG00000065609	tier1	-	-	46	0	0.00	72	4	5.26
SORCS3	0	genome.wustl.edu	37	10	107015536	107015536	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	10	107015536	107015536	T	C	SNP	SORCS3	ENST00000369701	human	ensembl	74_37	+1	known	missense	c.3314	p.V1105A	1.000	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS3	HGNC	ENSG00000156395				78	0	0.00	56	4	6.67
SPCS3	0	genome.wustl.edu	37	4	177248294	177248294	+	RNA	SNP	A	A	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	4	177248294	177248294	A	C	SNP	SPCS3	ENST00000507001	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.997	-	-	-	no_errors	SPCS3	HGNC	ENSG00000129128	tier1	-	-	69	0	0.00	36	17	32.08
SPIRE2	0	genome.wustl.edu	37	16	89924827	89924827	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	16	89924827	89924827	A	G	SNP	SPIRE2	ENST00000378247	human	ensembl	74_37	+1	known	missense	c.1184	p.D395G	0.107	NULL	superfamily_Znf_FYVE_PHD,smart_KIND	-	no_errors	SPIRE2	HGNC	ENSG00000204991	tier1	-	-	86	0	0.00	79	13	14.13
SRPX	0	genome.wustl.edu	37	X	38079995	38079995	+	Silent	SNP	C	C	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	X	38079995	38079995	C	A	SNP	SRPX	ENST00000378533	human	ensembl	74_37	-1	known	silent	c.51	p.L17	0.004	NULL	pfam_Hyalin,pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Hyalin,pfscan_Sushi_SCR_CCP	-	no_errors	SRPX	HGNC	ENSG00000101955				25	0	0.00	22	4	15.38
SRPX	0	genome.wustl.edu	37	X	38079996	38079996	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	X	38079996	38079996	A	G	SNP	SRPX	ENST00000378533	human	ensembl	74_37	-1	known	missense	c.50	p.L17P	0.000	NULL	pfam_Hyalin,pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Hyalin,pfscan_Sushi_SCR_CCP	-	no_errors	SRPX	HGNC	ENSG00000101955				25	0	0.00	22	4	15.38
STAB1	0	genome.wustl.edu	37	3	52544055	52544055	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	3	52544055	52544055	C	T	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	silent	c.2517	p.S839	0.053	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327	tier1	-	-	79	0	0.00	60	4	6.25
SUV420H1	0	genome.wustl.edu	37	11	67926519	67926519	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	11	67926519	67926519	T	C	SNP	SUV420H1	ENST00000304363	human	ensembl	74_37	-1	known	missense	c.1294	p.I432V	0.000	NULL	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	-	no_errors	SUV420H1	HGNC	ENSG00000110066				25	0	0.00	45	5	10.00
SYK	0	genome.wustl.edu	37	9	93627351	93627351	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	9	93627351	93627351	G	A	SNP	SYK	ENST00000375746	human	ensembl	74_37	+1	known	missense	c.818	p.R273H	0.017	pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,superfamily_Kinase-like_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_SYK/ZAP70,pfscan_SH2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	SYK	HGNC	ENSG00000165025	tier1	rs139520862	-	71	0	0.00	57	4	6.56
TBC1D4	0	genome.wustl.edu	37	13	76055775	76055775	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	13	76055775	76055775	C	-	DEL	TBC1D4	ENST00000377636	human	ensembl	74_37	-1	known	frame_shift_del	c.129	p.S44fs	1.000	smart_PTB/PI_dom	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D4	HGNC	ENSG00000136111	tier1			48	0	0.00	21	16	43.24
TEP1	0	genome.wustl.edu	37	14	20844365	20844365	+	Silent	SNP	T	T	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	14	20844365	20844365	T	C	SNP	TEP1	ENST00000262715	human	ensembl	74_37	-1	known	silent	c.6147	p.E2049	0.002	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_TROVE,pfam_TEP1_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_NACHT_NTPase,pfscan_TROVE,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TEP1	HGNC	ENSG00000129566	tier1	-	-	35	0	0.00	33	8	19.51
THSD4	0	genome.wustl.edu	37	15	72063512	72063512	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	15	72063512	72063512	A	G	SNP	THSD4	ENST00000261862	human	ensembl	74_37	+1	known	missense	c.2879	p.E960G	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD4	HGNC	ENSG00000187720	tier1	-	-	113	0	0.00	89	27	23.28
TNKS2	0	genome.wustl.edu	37	10	93614825	93614825	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	10	93614825	93614825	G	C	SNP	TNKS2	ENST00000371627	human	ensembl	74_37	+1	known	missense	c.2855	p.G952A	1.000	NULL	pfam_Ankyrin_rpt,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_SAM_2,pfam_SAM_type1,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_Poly(ADP-ribose)pol_cat_dom,prints_Ankyrin_rpt	-	no_errors	TNKS2	HGNC	ENSG00000107854				58	0	0.00	57	4	6.45
TNXB	0	genome.wustl.edu	37	6	32024678	32024678	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	6	32024678	32024678	C	A	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.7828	p.D2610Y	0.032	NULL	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	tier1	-	-	96	0	0.00	73	16	17.78
TOPBP1	0	genome.wustl.edu	37	3	133320154	133320154	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	3	133320154	133320154	T	A	SNP	TOPBP1	ENST00000260810	human	ensembl	74_37	-1	known	missense	c.4509	p.L1503F	0.804	NULL	pfam_BRCT_dom,superfamily_BRCT_dom,superfamily_Secretoglobin,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TOPBP1	HGNC	ENSG00000163781	tier1	-	-	97	0	0.00	75	22	22.68
TP53	0	genome.wustl.edu	37	17	7576897	7576897	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	17	7576897	7576897	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	nonsense	c.949	p.Q317*	0.012	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	103	0	0.00	51	41	44.57
TRIM71	0	genome.wustl.edu	37	3	32859629	32859629	+	Silent	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	3	32859629	32859629	C	T	SNP	TRIM71	ENST00000383763	human	ensembl	74_37	+1	known	silent	c.57	p.C19	1.000	smart_Znf_RING,pfscan_Znf_RING	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM71	HGNC	ENSG00000206557				32	0	0.00	30	2	6.25
TSTD2	0	genome.wustl.edu	37	9	100388272	100388272	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	9	100388272	100388272	G	A	SNP	TSTD2	ENST00000341170	human	ensembl	74_37	-1	known	missense	c.173	p.A58V	1.000	NULL	pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom	-	no_errors	TSTD2	HGNC	ENSG00000136925				44	0	0.00	32	2	5.88
ULK1	0	genome.wustl.edu	37	12	132405711	132405711	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	132405711	132405711	G	T	SNP	ULK1	ENST00000321867	human	ensembl	74_37	+1	known	missense	c.3028	p.A1010S	1.000	pfam_Ser/Thr_kinase_C,pirsf_Ser/Thr_kin_STPK_Ulk-1/2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ser/Thr_kinase_C,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ULK1	HGNC	ENSG00000177169	tier1	-	-	18	0	0.00	16	5	23.81
ULK1	0	genome.wustl.edu	37	12	132405712	132405712	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	132405712	132405712	C	T	SNP	ULK1	ENST00000321867	human	ensembl	74_37	+1	known	missense	c.3029	p.A1010V	0.999	pfam_Ser/Thr_kinase_C,pirsf_Ser/Thr_kin_STPK_Ulk-1/2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ser/Thr_kinase_C,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kin_STPK_Ulk-1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ULK1	HGNC	ENSG00000177169	tier1	-	-	17	0	0.00	17	5	22.73
VARS2	0	genome.wustl.edu	37	6	30892146	30892146	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	6	30892146	30892146	G	A	SNP	VARS2	ENST00000541562	human	ensembl	74_37	+1	known	missense	c.2572	p.V858M	0.074	pfam_V/L/I-tRNA-synth_anticodon-bd,superfamily_tRNAsynth_1a_anticodon-bd,tigrfam_Valyl-tRNA_ligase	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,prints_Valyl-tRNA_ligase,tigrfam_Valyl-tRNA_ligase	-	no_errors	VARS2	HGNC	ENSG00000137411				40	0	0.00	39	3	7.14
VPS4A	0	genome.wustl.edu	37	16	69353364	69353364	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	16	69353364	69353364	G	A	SNP	VPS4A	ENST00000254950	human	ensembl	74_37	+1	known	missense	c.538	p.V180M	1.000	pfam_ATPase_AAA_core,pfam_IstB_ATP-bd,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_MIT,pfam_IstB_ATP-bd,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_MIT,smart_AAA+_ATPase	-	no_errors	VPS4A	HGNC	ENSG00000132612	tier1	-	-	61	0	0.00	64	4	5.88
WDR47	0	genome.wustl.edu	37	1	109566072	109566072	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	109566072	109566072	G	T	SNP	WDR47	ENST00000400794	human	ensembl	74_37	-1	known	missense	c.63	p.F21L	0.998	smart_LisH_dimerisation,pfscan_LisH_dimerisation	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_CTLH_C,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_CTLH_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR47	HGNC	ENSG00000085433	tier1	-	-	51	0	0.00	43	4	8.51
ZC3H12A	0	genome.wustl.edu	37	1	37948688	37948688	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	1	37948688	37948688	G	C	SNP	ZC3H12A	ENST00000373087	human	ensembl	74_37	+1	known	missense	c.1276	p.D426H	0.010	NULL	pfam_RNase_Zc3h12	-	no_errors	ZC3H12A	HGNC	ENSG00000163874	tier1	-	-	180	0	0.00	134	10	6.94
ZNF214	0	genome.wustl.edu	37	11	7022088	7022088	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	11	7022088	7022088	C	T	SNP	ZNF214	ENST00000278314	human	ensembl	74_37	-1	known	missense	c.826	p.G276R	0.001	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF214	HGNC	ENSG00000149050				26	0	0.00	11	2	15.38
ZNF217	0	genome.wustl.edu	37	20	52193541	52193541	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	20	52193541	52193541	C	T	SNP	ZNF217	ENST00000302342	human	ensembl	74_37	-1	known	missense	c.1762	p.G588S	0.998	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF217	HGNC	ENSG00000171940	tier1	-	-	71	0	0.00	76	4	5.00
ZNF664	0	genome.wustl.edu	37	12	124496969	124496969	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	12	124496969	124496969	G	A	SNP	ZNF664	ENST00000337815	human	ensembl	74_37	+1	known	missense	c.278	p.G93D	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF664	HGNC	ENSG00000179195				46	0	0.00	52	4	7.14
ZNF804B	0	genome.wustl.edu	37	7	88963404	88963404	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	7	88963404	88963404	C	A	SNP	ZNF804B	ENST00000333190	human	ensembl	74_37	+1	known	missense	c.1108	p.P370T	0.002	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804B	HGNC	ENSG00000182348	tier1	-	-	41	0	0.00	64	6	8.57
ZNF90	0	genome.wustl.edu	37	19	20190747	20190747	+	RNA	DEL	T	T	-			TCGA-L5-A88S-01A-11D-A36J-09	TCGA-L5-A88S-11A-21D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	95411ce0-7179-4a2d-898b-61c3a34914a5	bdec0424-10f1-43a6-85ce-175c9db002fc	19	20190747	20190747	T	-	DEL	ZNF90	ENST00000492328	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZNF90	HGNC	ENSG00000213988	tier1			18	0	0.00	21	4	16.00
