Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ACADSB	0	genome.wustl.edu	37	10	124810675	124810675	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	10	124810675	124810675	G	A	SNP	ACADSB	ENST00000358776	human	ensembl	74_37	+1	known	silent	c.1101	p.A367	0.501	pfam_AcylCo_DH/oxidase_C,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCo_DH/oxidase_C	pfam_AcylCo_DH/oxidase_C,pfam_AcylCoA_DH/ox_N,pfam_Acyl-CoA_DH_2_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C	-	no_errors	ACADSB	HGNC	ENSG00000196177	tier1	rs145295182	-	56	0	0.00	27	12	30.77
ACHE	0	genome.wustl.edu	37	7	100491648	100491648	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	100491648	100491648	G	A	SNP	ACHE	ENST00000302913	human	ensembl	74_37	-1	known	missense	c.206	p.A69V	0.988	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	ACHE	HGNC	ENSG00000087085	tier1	-	-	89	0	0.00	42	33	44.00
ADAM12	0	genome.wustl.edu	37	10	127734653	127734653	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	10	127734653	127734653	C	A	SNP	ADAM12	ENST00000368679	human	ensembl	74_37	-1	known	nonsense	c.1975	p.E659*	0.186	pfscan_EG-like_dom	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM12	HGNC	ENSG00000148848	tier1	-	-	45	0	0.00	30	24	43.64
ADORA3	0	genome.wustl.edu	37	1	112043252	112043253	+	RNA	DEL	GA	GA	-			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	112043252	112043253	GA	-	DEL	ADORA3	ENST00000486342	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ADORA3	HGNC	ENSG00000121933	tier1			21	0	0.00	3	2	40.00
AMY2B	0	genome.wustl.edu	37	1	104116391	104116391	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	104116391	104116391	C	G	SNP	AMY2B	ENST00000361355	human	ensembl	74_37	+1	known	missense	c.575	p.S192C	0.936	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY2B	HGNC	ENSG00000240038	tier1	-	-	241	0	0.00	86	51	37.23
ANK2	0	genome.wustl.edu	37	4	114278181	114278181	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	4	114278181	114278181	G	T	SNP	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	nonsense	c.8407	p.E2803*	0.004	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362				28	0	0.00	25	2	7.14
ANKRD50	0	genome.wustl.edu	37	4	125592765	125592765	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	4	125592765	125592765	C	T	SNP	ANKRD50	ENST00000504087	human	ensembl	74_37	-1	known	missense	c.1667	p.G556D	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD50	HGNC	ENSG00000151458	tier1	-	-	55	0	0.00	19	14	42.42
APC	0	genome.wustl.edu	37	5	112175951	112175952	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	5	112175951	112175952	-	A	INS	APC	ENST00000257430	human	ensembl	74_37	+1	known	frame_shift_ins	c.4660_4661	p.T1556fs	0.925:0.945	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982	tier1			55	0	0.00	7	16	69.57
ARHGEF15	0	genome.wustl.edu	37	17	8215725	8215725	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	8215725	8215725	C	T	SNP	ARHGEF15	ENST00000361926	human	ensembl	74_37	+1	known	missense	c.368	p.P123L	0.996	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF15	HGNC	ENSG00000198844	tier1	-	-	104	0	0.00	8	54	87.10
ARID4B	0	genome.wustl.edu	37	1	235409746	235409748	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	235409746	235409748	TCT	-	DEL	ARID4B	ENST00000264183	human	ensembl	74_37	-1	known	in_frame_del	c.435_433	p.R145in_frame_del	1.000:1.000:1.000	NULL	pfam_RBB1NT,pfam_ARID/BRIGHT_DNA-bd,pfam_Tudor-knot,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Chromodomain-like,smart_Tudor,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID4B	HGNC	ENSG00000054267	tier1			106	0	0.00	72	27	27.27
ARL5C	0	genome.wustl.edu	37	17	37316924	37316924	+	Silent	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	37316924	37316924	C	T	SNP	ARL5C	ENST00000269586	human	ensembl	74_37	-1	known	silent	c.411	p.E137	0.983	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,prints_Small_GTPase_ARF/SAR,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	ARL5C	HGNC	ENSG00000141748	tier1	-	-	72	0	0.00	142	805	85.01
AXL	0	genome.wustl.edu	37	19	41754709	41754709	+	Silent	SNP	T	T	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	41754709	41754709	T	C	SNP	AXL	ENST00000301178	human	ensembl	74_37	+1	known	silent	c.1695	p.A565	0.987	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	AXL	HGNC	ENSG00000167601	tier1	-	-	56	0	0.00	26	10	27.78
AZI2	0	genome.wustl.edu	37	3	28364075	28364075	+	RNA	SNP	C	C	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	3	28364075	28364075	C	G	SNP	AZI2	ENST00000295748	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AZI2	HGNC	ENSG00000163512	tier1	-	-	113	0	0.00	19	53	73.61
BAI3	0	genome.wustl.edu	37	6	70034887	70034887	+	Silent	SNP	A	A	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	70034887	70034887	A	C	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	silent	c.2938	p.R980	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298	tier1	-	-	91	0	0.00	39	12	23.53
BICC1	0	genome.wustl.edu	37	10	60577321	60577321	+	Splice_Site	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	10	60577321	60577321	G	A	SNP	BICC1	ENST00000373886	human	ensembl	74_37	+1	known	splice_site	c.2534-1	e19-1	1.000	-	-	-	no_errors	BICC1	HGNC	ENSG00000122870	tier1	-	-	73	0	0.00	33	14	29.79
BZRAP1	0	genome.wustl.edu	37	17	56397906	56397906	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	56397906	56397906	C	T	SNP	BZRAP1	ENST00000355701	human	ensembl	74_37	-1	known	missense	c.1459	p.V487M	0.997	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379	tier1	-	-	120	0	0.00	41	62	60.19
C2CD3	0	genome.wustl.edu	37	11	73789404	73789404	+	Silent	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	73789404	73789404	C	T	SNP	C2CD3	ENST00000334126	human	ensembl	74_37	-1	known	silent	c.4359	p.K1453	0.948	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	C2CD3	HGNC	ENSG00000168014	tier1	-	-	110	0	0.00	39	4	9.30
C3orf79	0	genome.wustl.edu	37	3	153203846	153203846	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	3	153203846	153203846	C	A	SNP	C3orf79	ENST00000446603	human	ensembl	74_37	+1	known	missense	c.175	p.P59T	0.001	NULL	NULL	-	no_errors	C3orf79	HGNC	ENSG00000237787	tier1	-	-	68	0	0.00	40	17	29.82
C6	0	genome.wustl.edu	37	5	41155094	41155094	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	5	41155094	41155094	T	A	SNP	C6	ENST00000263413	human	ensembl	74_37	-1	known	missense	c.2081	p.Q694L	0.729	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_MACPF,pfam_Sushi_SCR_CCP,pfam_Thrombospondin_1_rpt,pfam_LDrepeatLR_classA_rpt,pfam_Kazal_dom,superfamily_Sushi_SCR_CCP,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,smart_Sushi_SCR_CCP,smart_FacI_MAC,prints_MAC_perforin,pfscan_LDrepeatLR_classA_rpt,pfscan_Sushi_SCR_CCP,pfscan_Thrombospondin_1_rpt	-	no_errors	C6	HGNC	ENSG00000039537	tier1	-	-	55	0	0.00	26	28	51.85
C8orf74	0	genome.wustl.edu	37	8	10532174	10532174	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	8	10532174	10532174	C	T	SNP	C8orf74	ENST00000304519	human	ensembl	74_37	+1	known	missense	c.67	p.R23C	0.223	NULL	NULL	-	no_errors	C8orf74	HGNC	ENSG00000171060	tier1	-	-	37	0	0.00	4	12	75.00
C9	0	genome.wustl.edu	37	5	39289010	39289010	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	5	39289010	39289010	G	A	SNP	C9	ENST00000263408	human	ensembl	74_37	-1	known	missense	c.1460	p.A487V	0.998	pfam_MACPF,smart_MACPF,prints_MAC_perforin	pfam_MACPF,pfam_LDrepeatLR_classA_rpt,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,prints_MAC_perforin,pfscan_LDrepeatLR_classA_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	C9	HGNC	ENSG00000113600	tier1	-	-	76	0	0.00	70	4	5.41
CA10	0	genome.wustl.edu	37	17	49731019	49731019	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	49731019	49731019	C	T	SNP	CA10	ENST00000340813	human	ensembl	74_37	-1	known	missense	c.562	p.V188I	1.000	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA10	HGNC	ENSG00000154975	tier1	-	-	86	0	0.00	34	41	54.67
CACNA1E	0	genome.wustl.edu	37	1	181732596	181732596	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	181732596	181732596	C	T	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	missense	c.4744	p.R1582C	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	tier1	-	-	66	0	0.00	42	26	37.68
CACNA1E	0	genome.wustl.edu	37	1	181732614	181732614	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	181732614	181732614	C	T	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	missense	c.4762	p.R1588C	0.999	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	tier1	-	-	71	0	0.00	43	15	25.86
CAMK1D	0	genome.wustl.edu	37	10	12802957	12802957	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	10	12802957	12802957	G	A	SNP	CAMK1D	ENST00000378847	human	ensembl	74_37	+1	known	missense	c.310	p.G104R	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK1D	HGNC	ENSG00000183049	tier1	-	-	67	0	0.00	48	13	21.31
CAPZA1	0	genome.wustl.edu	37	1	113212706	113212706	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	113212706	113212706	G	A	SNP	CAPZA1	ENST00000263168	human	ensembl	74_37	+1	known	nonsense	c.813	p.W271*	1.000	pfam_CapZ_alpha,prints_CapZ_alpha	pfam_CapZ_alpha,prints_CapZ_alpha	-	no_errors	CAPZA1	HGNC	ENSG00000116489	tier1	-	-	51	0	0.00	13	13	50.00
CCDC73	0	genome.wustl.edu	37	11	32675584	32675584	+	Splice_Site	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	32675584	32675584	C	A	SNP	CCDC73	ENST00000335185	human	ensembl	74_37	-1	known	splice_site	c.775-1	e10-1	1.000	-	-	-	no_errors	CCDC73	HGNC	ENSG00000186714				45	0	0.00	17	2	10.53
CCNB2	0	genome.wustl.edu	37	15	59408989	59408989	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	15	59408989	59408989	T	C	SNP	CCNB2	ENST00000288207	human	ensembl	74_37	+1	known	missense	c.698	p.F233S	0.998	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNB2	HGNC	ENSG00000157456	tier1	-	-	62	0	0.00	57	28	32.94
CCNJL	0	genome.wustl.edu	37	5	159680513	159680513	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	5	159680513	159680513	G	A	SNP	CCNJL	ENST00000393977	human	ensembl	74_37	-1	known	missense	c.1180	p.P394S	0.948	NULL	pfam_Cyclin_C-dom,pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNJL	HGNC	ENSG00000135083				81	0	0.00	50	4	7.41
CDH2	0	genome.wustl.edu	37	18	25570060	25570060	+	Splice_Site	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	18	25570060	25570060	C	A	SNP	CDH2	ENST00000269141	human	ensembl	74_37	-1	known	splice_site	c.1598+1	e10+1	1.000	-	-	-	no_errors	CDH2	HGNC	ENSG00000170558	tier1	-	-	94	0	0.00	26	12	31.58
CDH2	0	genome.wustl.edu	37	18	25570148	25570148	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	18	25570148	25570148	A	T	SNP	CDH2	ENST00000269141	human	ensembl	74_37	-1	known	missense	c.1511	p.I504N	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH2	HGNC	ENSG00000170558	tier1	-	-	128	0	0.00	39	28	41.79
CHIC1	0	genome.wustl.edu	37	X	72804366	72804366	+	Silent	SNP	A	A	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	X	72804366	72804366	A	G	SNP	CHIC1	ENST00000373502	human	ensembl	74_37	+1	known	silent	c.465	p.T155	0.967	pfam_Golgin_A_7/ERF4	pfam_Golgin_A_7/ERF4	-	no_errors	CHIC1	HGNC	ENSG00000204116	tier1	-	-	51	0	0.00	31	20	39.22
CHST3	0	genome.wustl.edu	37	10	73767768	73767768	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	10	73767768	73767768	G	T	SNP	CHST3	ENST00000373115	human	ensembl	74_37	+1	known	missense	c.979	p.D327Y	0.008	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST3	HGNC	ENSG00000122863	tier1	-	-	18	0	0.00	5	4	44.44
CLCN1	0	genome.wustl.edu	37	7	143020445	143020445	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	143020445	143020445	G	T	SNP	CLCN1	ENST00000343257	human	ensembl	74_37	+1	known	missense	c.740	p.S247I	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated,prints_Cl_channel-1	-	no_errors	CLCN1	HGNC	ENSG00000188037				61	0	0.00	51	4	7.27
COL20A1	0	genome.wustl.edu	37	20	61926504	61926504	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	20	61926504	61926504	G	A	SNP	COL20A1	ENST00000326996	human	ensembl	74_37	+1	known	silent	c.45	p.L15	0.949	NULL	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL20A1	HGNC	ENSG00000101203	tier1	-	-	158	0	0.00	141	37	20.79
COL25A1	0	genome.wustl.edu	37	4	110223107	110223107	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	4	110223107	110223107	G	A	SNP	COL25A1	ENST00000399132	human	ensembl	74_37	-1	known	silent	c.69	p.A23	0.000	NULL	pfam_Collagen	-	no_errors	COL25A1	HGNC	ENSG00000188517	tier1	-	-	117	0	0.00	82	18	18.00
CRYBB1	0	genome.wustl.edu	37	22	27008099	27008099	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	22	27008099	27008099	T	C	SNP	CRYBB1	ENST00000215939	human	ensembl	74_37	-1	known	missense	c.236	p.E79G	1.000	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBB1	HGNC	ENSG00000100122				40	0	0.00	49	3	5.66
CSMD1	0	genome.wustl.edu	37	8	2857633	2857633	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	8	2857633	2857633	C	G	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.8053	p.D2685H	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	62	0	0.00	8	22	73.33
CSNK1E	0	genome.wustl.edu	37	22	38690402	38690402	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	22	38690402	38690402	G	A	SNP	CSNK1E	ENST00000359867	human	ensembl	74_37	-1	known	missense	c.1024	p.R342C	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CSNK1E	HGNC	ENSG00000213923	tier1	-	-	11	0	0.00	1	10	90.91
CXCR3	0	genome.wustl.edu	37	X	70837155	70837155	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	X	70837155	70837155	A	C	SNP	CXCR3	ENST00000373691	human	ensembl	74_37	-1	known	missense	c.308	p.L103R	0.996	prints_GPCR_Rhodpsn,prints_Chemokine_CXCR4,prints_Chemokine_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CXCR3,prints_GPCR_Rhodpsn,prints_Chemokine_CXCR4,prints_Chemokine_rcpt,prints_ATII_rcpt	-	no_errors	CXCR3	HGNC	ENSG00000186810				9	0	0.00	2	9	81.82
DDX11L1	0	genome.wustl.edu	37	1	13308	13308	+	RNA	SNP	T	T	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	13308	13308	T	G	SNP	DDX11L1	ENST00000456328	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	DDX11L1	HGNC	ENSG00000223972	tier1	-	-	44	0	0.00	30	6	16.67
DGKK	0	genome.wustl.edu	37	X	50165516	50165516	+	RNA	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	X	50165516	50165516	G	T	SNP	DGKK	ENST00000376025	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.984	-	-	-	no_errors	DGKK	HGNC	ENSG00000204466	tier1	-	-	73	0	0.00	14	51	78.46
DLEC1	0	genome.wustl.edu	37	3	38138760	38138760	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	3	38138760	38138760	G	T	SNP	DLEC1	ENST00000346219	human	ensembl	74_37	+1	known	missense	c.2428	p.V810F	0.395	superfamily_PapD-like	superfamily_PapD-like	-	no_errors	DLEC1	HGNC	ENSG00000008226	tier1	-	-	104	0	0.00	54	4	6.90
DLG1	0	genome.wustl.edu	37	3	196857506	196857506	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	3	196857506	196857506	C	T	SNP	DLG1	ENST00000346964	human	ensembl	74_37	-1	known	missense	c.1156	p.E386K	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_M-assoc_guanylate_kinase,pfscan_PDZ	pfam_GK/Ca_channel_bsu,pfam_PDZ,pfam_MAGUK_PEST_N,pfam_L27_1,pfam_PDZ_assoc,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG1	HGNC	ENSG00000075711	tier1	-	-	55	0	0.00	32	30	48.39
DNAH10	0	genome.wustl.edu	37	12	124332541	124332541	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	12	124332541	124332541	G	A	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	missense	c.5494	p.G1832S	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	tier1	-	-	50	0	0.00	20	21	51.22
DNM1P51	0	genome.wustl.edu	37	15	84959139	84959139	+	RNA	SNP	G	G	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	15	84959139	84959139	G	C	SNP	DNM1P51	ENST00000558801	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.853	-	-	-	no_errors	DNM1P51	HGNC	ENSG00000235370	tier1	-	-	14	0	0.00	2	5	71.43
DNM1P51	0	genome.wustl.edu	37	15	84959829	84959829	+	RNA	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	15	84959829	84959829	G	A	SNP	DNM1P51	ENST00000558801	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.264	-	-	-	no_errors	DNM1P51	HGNC	ENSG00000235370	tier1	-	-	19	0	0.00	15	9	37.50
DPYD	0	genome.wustl.edu	37	1	97839190	97839190	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	97839190	97839190	G	T	SNP	DPYD	ENST00000370192	human	ensembl	74_37	-1	known	missense	c.1985	p.A662E	1.000	pfam_Dihydroorotate_DH_1_2,pfam_tRNA_hU_synthase,tigrfam_Dihydroorotate_DH	pfam_Dihydroorotate_DH_1_2,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_tRNA_hU_synthase,superfamily_Helical_ferredxn,prints_FAD_pyr_nucl-diS_OxRdtase,tigrfam_Dihydroorotate_DH	-	no_errors	DPYD	HGNC	ENSG00000188641				76	0	0.00	30	2	6.25
EBF1	0	genome.wustl.edu	37	5	158139190	158139190	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	5	158139190	158139190	G	A	SNP	EBF1	ENST00000313708	human	ensembl	74_37	-1	known	silent	c.1521	p.N507	0.640	NULL	pfam_IPT,superfamily_Ig_E-set,superfamily_bHLH_dom,smart_IPT	-	no_errors	EBF1	HGNC	ENSG00000164330	tier1	-	-	69	0	0.00	17	12	41.38
EBF4	0	genome.wustl.edu	37	20	2686365	2686365	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	20	2686365	2686365	G	A	SNP	EBF4	ENST00000380648	human	ensembl	74_37	+1	known	missense	c.268	p.V90M	1.000	NULL	pfam_IPT,superfamily_Ig_E-set,smart_IPT	-	no_errors	EBF4	HGNC	ENSG00000088881	tier1	-	-	132	0	0.00	86	21	19.63
EFCC1	0	genome.wustl.edu	37	3	128753059	128753059	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	3	128753059	128753059	G	A	SNP	EFCC1	ENST00000436022	human	ensembl	74_37	+1	known	missense	c.25	p.G9S	0.000	NULL	NULL	-	no_errors	EFCC1	HGNC	ENSG00000114654	tier1	-	-	61	0	0.00	40	8	16.67
EID3	0	genome.wustl.edu	37	12	104698038	104698038	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	12	104698038	104698038	C	A	SNP	EID3	ENST00000527879	human	ensembl	74_37	+1	known	nonsense	c.326	p.S109*	0.000	pfam_Nse4_C	pfam_Nse4_C	-	no_errors	EID3	HGNC	ENSG00000255150	tier1	-	-	79	0	0.00	11	35	76.09
ELOVL5	0	genome.wustl.edu	37	6	53138125	53138125	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	53138125	53138125	G	A	SNP	ELOVL5	ENST00000541407	human	ensembl	74_37	-1	known	missense	c.595	p.L199F	0.902	pfam_GNS1_SUR4	pfam_GNS1_SUR4	-	no_errors	ELOVL5	HGNC	ENSG00000012660	tier1	-	-	109	0	0.00	78	30	27.78
EMID1	0	genome.wustl.edu	37	22	29650196	29650196	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	22	29650196	29650196	A	G	SNP	EMID1	ENST00000334018	human	ensembl	74_37	+1	known	missense	c.1124	p.E375G	1.000	NULL	pfam_Collagen,pfam_EMI_domain,pfscan_EMI_domain	-	no_errors	EMID1	HGNC	ENSG00000186998				74	0	0.00	65	5	7.14
ENOX1	0	genome.wustl.edu	37	13	43900600	43900600	+	Silent	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	13	43900600	43900600	C	T	SNP	ENOX1	ENST00000261488	human	ensembl	74_37	-1	known	silent	c.1098	p.S366	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ENOX1	HGNC	ENSG00000120658	tier1	-	-	118	0	0.00	102	19	15.70
ENSG00000205018	0	genome.wustl.edu	37	16	89017500	89017500	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	16	89017500	89017500	C	T	SNP	ENSG00000205018	ENST00000378347	human	ensembl	74_37	+1	putative	missense	c.974	p.P325L	0.729	NULL	NULL	-	no_errors	RP11-830F9.6	Clone_based_vega_gene	ENSG00000205018	tier1	rs201099523	-	191	0	0.00	33	163	83.16
ENSG00000223579	0	genome.wustl.edu	37	22	20640840	20640840	+	RNA	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	22	20640840	20640840	G	A	SNP	ENSG00000223579	ENST00000577456	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.052	-	-	-	no_errors	AC011718.2	Clone_based_vega_gene	ENSG00000223579				185	0	0.00	141	14	9.03
ENSG00000251429	0	genome.wustl.edu	37	4	159198915	159198915	+	RNA	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	4	159198915	159198915	G	A	SNP	ENSG00000251429	ENST00000512016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.951	-	-	-	no_errors	RP11-597D13.7	Clone_based_vega_gene	ENSG00000251429	tier1	-	-	31	0	0.00	15	12	44.44
ENSG00000267243	0	genome.wustl.edu	37	19	29213649	29213649	+	RNA	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	29213649	29213649	C	T	SNP	ENSG00000267243	ENST00000590072	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.715	-	-	-	no_errors	AC005307.3	Clone_based_vega_gene	ENSG00000267243	tier1	-	-	23	0	0.00	10	17	62.96
EPB41L3	0	genome.wustl.edu	37	18	5478309	5478309	+	Silent	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	18	5478309	5478309	G	T	SNP	EPB41L3	ENST00000341928	human	ensembl	74_37	-1	known	silent	c.312	p.V104	0.998	pirsf_Band_41_protein	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L3	HGNC	ENSG00000082397	tier1	-	-	90	0	0.00	77	15	16.30
ERBB2	0	genome.wustl.edu	37	17	37879610	37879610	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	37879610	37879610	T	A	SNP	ERBB2	ENST00000269571	human	ensembl	74_37	+1	known	missense	c.1985	p.L662Q	0.998	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB2	HGNC	ENSG00000141736	tier1	-	-	79	0	0.00	1780	601	25.19
F3	0	genome.wustl.edu	37	1	95005863	95005863	+	Silent	SNP	A	A	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	95005863	95005863	A	T	SNP	F3	ENST00000334047	human	ensembl	74_37	-1	known	silent	c.162	p.I54	0.990	superfamily_Fibronectin_type3,pirsf_Tissue_fac/coagulation_fac-3,prints_Tissue_factor	pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,pirsf_Tissue_fac/coagulation_fac-3,prints_Tissue_factor	-	no_errors	F3	HGNC	ENSG00000117525	tier1	-	-	111	0	0.00	56	30	34.88
FAM171A1	0	genome.wustl.edu	37	10	15256431	15256431	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	10	15256431	15256431	C	T	SNP	FAM171A1	ENST00000378116	human	ensembl	74_37	-1	known	missense	c.1156	p.E386K	0.073	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171	-	no_errors	FAM171A1	HGNC	ENSG00000148468				50	0	0.00	42	5	10.42
FAM83B	0	genome.wustl.edu	37	6	54806542	54806542	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	54806542	54806542	C	T	SNP	FAM83B	ENST00000306858	human	ensembl	74_37	+1	known	nonsense	c.2773	p.R925*	0.000	NULL	pfam_DUF1669	-	no_errors	FAM83B	HGNC	ENSG00000168143	tier1	-	-	57	0	0.00	36	15	29.41
FAM90A27P	0	genome.wustl.edu	37	19	53786091	53786091	+	RNA	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	53786091	53786091	C	T	SNP	FAM90A27P	ENST00000599085	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM90A27P	HGNC	ENSG00000189348	tier1	-	-	136	0	0.00	44	24	35.29
FAT1	0	genome.wustl.edu	37	4	187521446	187521446	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	4	187521446	187521446	G	T	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.11709	p.S3903R	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	tier1	-	-	42	0	0.00	34	4	10.53
FBN3	0	genome.wustl.edu	37	19	8156451	8156451	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	8156451	8156451	G	A	SNP	FBN3	ENST00000270509	human	ensembl	74_37	-1	known	missense	c.5929	p.P1977S	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_FBN,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449				71	0	0.00	20	2	9.09
FBXL2	0	genome.wustl.edu	37	3	33406164	33406164	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	3	33406164	33406164	G	A	SNP	FBXL2	ENST00000484457	human	ensembl	74_37	+1	known	silent	c.243	p.R81	1.000	smart_Leu-rich_rpt_Cys-con_subtyp	pfam_Leu-rich_rpt,pfam_F-box_dom,smart_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom	-	no_errors	FBXL2	HGNC	ENSG00000153558	tier1	-	-	89	0	0.00	45	44	49.44
FGF1	0	genome.wustl.edu	37	5	141974989	141974989	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	5	141974989	141974989	A	G	SNP	FGF1	ENST00000337706	human	ensembl	74_37	-1	known	missense	c.334	p.Y112H	1.000	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF1	HGNC	ENSG00000113578				76	0	0.00	45	3	6.25
FGF23	0	genome.wustl.edu	37	12	4479524	4479524	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	12	4479524	4479524	G	A	SNP	FGF23	ENST00000237837	human	ensembl	74_37	-1	known	silent	c.741	p.F247	0.008	NULL	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF23	HGNC	ENSG00000118972	tier1	-	-	64	0	0.00	24	22	47.83
FGF7	0	genome.wustl.edu	37	15	49776663	49776663	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	15	49776663	49776663	C	T	SNP	FGF7	ENST00000267843	human	ensembl	74_37	+1	known	nonsense	c.547	p.Q183*	1.000	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF7	HGNC	ENSG00000140285	tier1	-	-	424	0	0.00	221	132	37.18
FGFRL1	0	genome.wustl.edu	37	4	1019076	1019076	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	4	1019076	1019076	T	A	SNP	FGFRL1	ENST00000264748	human	ensembl	74_37	+1	known	missense	c.1456	p.S486T	0.992	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FGFRL1	HGNC	ENSG00000127418				31	0	0.00	28	2	6.67
FLYWCH1	0	genome.wustl.edu	37	16	2980438	2980438	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	16	2980438	2980438	G	A	SNP	FLYWCH1	ENST00000399667	human	ensembl	74_37	+1	known	missense	c.353	p.R118K	0.965	pfam_Znf_FLYWCH	pfam_Znf_FLYWCH	-	no_errors	FLYWCH1	HGNC	ENSG00000059122	tier1	-	-	86	0	0.00	32	31	49.21
FNIP1	0	genome.wustl.edu	37	5	131039772	131039772	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	5	131039772	131039772	T	G	SNP	FNIP1	ENST00000510461	human	ensembl	74_37	-1	known	missense	c.1102	p.S368R	1.000	NULL	NULL	-	no_errors	FNIP1	HGNC	ENSG00000217128	tier1	-	-	99	0	0.00	32	17	34.69
GDF7	0	genome.wustl.edu	37	2	20870855	20870855	+	Silent	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	2	20870855	20870855	C	T	SNP	GDF7	ENST00000272224	human	ensembl	74_37	+1	known	silent	c.1023	p.H341	0.972	NULL	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF7	HGNC	ENSG00000143869	tier1	-	-	8	0	0.00	8	7	46.67
GGN	0	genome.wustl.edu	37	19	38877401	38877401	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	38877401	38877401	G	A	SNP	GGN	ENST00000334928	human	ensembl	74_37	-1	known	silent	c.501	p.P167	0.002	NULL	NULL	-	no_errors	GGN	HGNC	ENSG00000179168	tier1	-	-	16	0	0.00	8	6	42.86
GIMAP4	0	genome.wustl.edu	37	7	150269569	150269569	+	Silent	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	150269569	150269569	C	A	SNP	GIMAP4	ENST00000255945	human	ensembl	74_37	+1	known	silent	c.411	p.I137	0.019	pfam_AIG1,superfamily_P-loop_NTPase	pfam_AIG1,superfamily_P-loop_NTPase	-	no_errors	GIMAP4	HGNC	ENSG00000133574	tier1	-	-	57	0	0.00	34	10	22.73
GRIFIN	0	genome.wustl.edu	37	7	2515352	2515352	+	RNA	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	2515352	2515352	C	T	SNP	GRIFIN	ENST00000417742	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.028	-	-	-	no_errors	GRIFIN	HGNC	ENSG00000236734	tier1	-	-	172	0	0.00	132	114	46.15
GRM1	0	genome.wustl.edu	37	6	146480607	146480607	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	146480607	146480607	G	A	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.824	p.R275H	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_mtglu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822				31	0	0.00	25	2	7.41
GRM4	0	genome.wustl.edu	37	6	34003798	34003798	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	34003798	34003798	C	T	SNP	GRM4	ENST00000374181	human	ensembl	74_37	-1	known	missense	c.2089	p.A697T	0.993	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_4,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM4	HGNC	ENSG00000124493	tier1	-	-	61	0	0.00	35	28	44.44
GTF3C3	0	genome.wustl.edu	37	2	197643772	197643772	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	2	197643772	197643772	A	C	SNP	GTF3C3	ENST00000263956	human	ensembl	74_37	-1	known	missense	c.1238	p.V413G	1.000	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	GTF3C3	HGNC	ENSG00000119041	tier1	-	-	97	0	0.00	87	31	26.27
GYPA	0	genome.wustl.edu	37	4	145039887	145039887	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	4	145039887	145039887	G	T	SNP	GYPA	ENST00000360771	human	ensembl	74_37	-1	known	missense	c.251	p.A84D	0.000	pfam_Glycophorin,pirsf_Glycophorin	pfam_Glycophorin,pirsf_Glycophorin	-	no_errors	GYPA	HGNC	ENSG00000170180				79	0	0.00	46	3	6.12
HAS1	0	genome.wustl.edu	37	19	52222715	52222715	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	52222715	52222715	C	T	SNP	HAS1	ENST00000601714	human	ensembl	74_37	-1	known	missense	c.467	p.R156H	0.997	NULL	pfam_Chitin_synth_fng,pfam_Glyco_trans_2	-	no_errors	HAS1	HGNC	ENSG00000105509	tier1	-	-	66	0	0.00	57	8	12.31
HDAC9	0	genome.wustl.edu	37	7	18674345	18674345	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	18674345	18674345	C	T	SNP	HDAC9	ENST00000441542	human	ensembl	74_37	+1	known	missense	c.892	p.P298S	1.000	pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC9	HGNC	ENSG00000048052	tier1	-	-	131	0	0.00	97	85	46.45
HERC2P4	0	genome.wustl.edu	37	16	32164283	32164283	+	RNA	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	16	32164283	32164283	G	A	SNP	HERC2P4	ENST00000563904	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.968	-	-	-	no_errors	HERC2P4	HGNC	ENSG00000230267	tier1	-	-	290	0	0.00	153	94	37.90
HIP1	0	genome.wustl.edu	37	7	75183808	75183808	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	75183808	75183808	C	T	SNP	HIP1	ENST00000336926	human	ensembl	74_37	-1	known	missense	c.1981	p.V661I	0.414	NULL	pfam_ANTH_dom,pfam_ILWEQ_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Epsin-like_N,smart_ILWEQ_dom,pfscan_Epsin-like_N,pfscan_ILWEQ_dom	-	no_errors	HIP1	HGNC	ENSG00000127946	tier1	-	-	57	0	0.00	33	24	42.11
HIST1H4K	0	genome.wustl.edu	37	6	27799101	27799101	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	27799101	27799101	C	G	SNP	HIST1H4K	ENST00000357549	human	ensembl	74_37	-1	known	missense	c.205	p.D69H	1.000	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4K	HGNC	ENSG00000197914	tier1	-	-	36	0	0.00	27	14	34.15
HIVEP1	0	genome.wustl.edu	37	6	12126085	12126085	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	12126085	12126085	G	A	SNP	HIVEP1	ENST00000379388	human	ensembl	74_37	+1	known	nonsense	c.6057	p.W2019*	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP1	HGNC	ENSG00000095951	tier1	-	-	29	0	0.00	18	18	50.00
HMX3	0	genome.wustl.edu	37	10	124895957	124895957	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	10	124895957	124895957	C	T	SNP	HMX3	ENST00000357878	human	ensembl	74_37	+1	known	nonsense	c.391	p.R131*	0.997	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HMX3	HGNC	ENSG00000188620	tier1	-	-	30	0	0.00	13	8	38.10
HOXB9	0	genome.wustl.edu	37	17	46700497	46700497	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	46700497	46700497	G	T	SNP	HOXB9	ENST00000311177	human	ensembl	74_37	-1	known	missense	c.518	p.T173N	1.000	superfamily_Homeodomain-like,pirsf_Homeobox_Hox9	pfam_Hox9_activation_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Hox9,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB9	HGNC	ENSG00000170689	tier1	-	-	44	0	0.00	38	4	9.52
HOXD4	0	genome.wustl.edu	37	2	177016482	177016482	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	2	177016482	177016482	G	A	SNP	HOXD4	ENST00000306324	human	ensembl	74_37	+1	known	missense	c.121	p.A41T	0.064	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXD4	HGNC	ENSG00000170166	tier1	-	-	117	0	0.00	87	11	11.11
HS3ST5	0	genome.wustl.edu	37	6	114378489	114378489	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	114378489	114378489	G	A	SNP	HS3ST5	ENST00000312719	human	ensembl	74_37	-1	known	missense	c.973	p.R325C	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST5	HGNC	ENSG00000249853	tier1	-	-	41	0	0.00	8	12	60.00
HSPA12A	0	genome.wustl.edu	37	10	118435975	118435975	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	10	118435975	118435975	C	T	SNP	HSPA12A	ENST00000369209	human	ensembl	74_37	-1	known	missense	c.1325	p.R442Q	1.000	NULL	NULL	-	no_errors	HSPA12A	HGNC	ENSG00000165868	tier1	-	-	59	0	0.00	26	10	27.78
IGSF11	0	genome.wustl.edu	37	3	118621687	118621687	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	3	118621687	118621687	G	T	SNP	IGSF11	ENST00000393775	human	ensembl	74_37	-1	known	missense	c.976	p.P326T	1.000	NULL	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	IGSF11	HGNC	ENSG00000144847	tier1	-	-	56	0	0.00	39	6	13.33
INHBB	0	genome.wustl.edu	37	2	121106818	121106818	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	2	121106818	121106818	C	T	SNP	INHBB	ENST00000295228	human	ensembl	74_37	+1	known	missense	c.592	p.R198W	1.000	pfam_TGF-b_N,prints_Inhibin_betaB	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_betaB,prints_Inhibin_asu	-	no_errors	INHBB	HGNC	ENSG00000163083	tier1	-	-	53	0	0.00	27	27	50.00
INPPL1	0	genome.wustl.edu	37	11	71942174	71942174	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	71942174	71942174	G	C	SNP	INPPL1	ENST00000298229	human	ensembl	74_37	+1	known	missense	c.1438	p.E480Q	1.000	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	pfam_Endo/exonuclease/phosphatase,pfam_SH2,pfam_SAM_2,pfam_SAM_type1,superfamily_Endo/exonuclease/phosphatase,superfamily_SAM/pointed,smart_SH2,smart_IPPc,smart_SAM,pfscan_SAM,pfscan_SH2,prints_SH2	-	no_errors	INPPL1	HGNC	ENSG00000165458	tier1	-	-	18	0	0.00	9	7	43.75
IRX1	0	genome.wustl.edu	37	5	3599749	3599749	+	Silent	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	5	3599749	3599749	C	T	SNP	IRX1	ENST00000302006	human	ensembl	74_37	+1	known	silent	c.687	p.D229	0.994	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX1	HGNC	ENSG00000170549	tier1	-	-	29	0	0.00	14	8	36.36
JAK3	0	genome.wustl.edu	37	19	17942130	17942130	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	17942130	17942130	T	A	SNP	JAK3	ENST00000458235	human	ensembl	74_37	-1	known	missense	c.2885	p.H962L	0.996	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,pfscan_Prot_kinase_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak3,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	JAK3	HGNC	ENSG00000105639	tier1	-	-	133	0	0.00	55	26	32.10
JARID2	0	genome.wustl.edu	37	6	15487651	15487651	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	15487651	15487651	C	T	SNP	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	missense	c.784	p.R262W	0.993	NULL	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083	tier1	-	-	118	0	0.00	56	47	45.63
JPH1	0	genome.wustl.edu	37	8	75227448	75227448	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	8	75227448	75227448	C	A	SNP	JPH1	ENST00000342232	human	ensembl	74_37	-1	known	missense	c.787	p.D263Y	0.993	pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH1	HGNC	ENSG00000104369	tier1	-	-	75	0	0.00	49	7	12.50
JPH3	0	genome.wustl.edu	37	16	87636607	87636607	+	RNA	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	16	87636607	87636607	C	T	SNP	JPH3	ENST00000301008	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.943	-	-	-	no_errors	JPH3	HGNC	ENSG00000154118	tier1	-	-	28	0	0.00	20	6	23.08
KCNK1	0	genome.wustl.edu	37	1	233802494	233802494	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	233802494	233802494	T	A	SNP	KCNK1	ENST00000366621	human	ensembl	74_37	+1	known	missense	c.509	p.I170N	0.462	pirsf_2pore_dom_K_chnl_TASK,prints_2pore_dom_K_chnl_TWIK1	pfam_2pore_dom_K_chnl_dom,pirsf_2pore_dom_K_chnl_TASK,prints_2pore_dom_K_chnl_TWIK1,prints_2pore_dom_K_chnl_TWIK,prints_2pore_dom_K_chnl	-	no_errors	KCNK1	HGNC	ENSG00000135750	tier1	-	-	54	0	0.00	49	15	23.08
KIAA0319	0	genome.wustl.edu	37	6	24547415	24547415	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	24547415	24547415	C	A	SNP	KIAA0319	ENST00000378214	human	ensembl	74_37	-1	known	missense	c.3197	p.S1066I	0.983	NULL	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_MANSC_N,smart_Fibronectin_type3,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319	HGNC	ENSG00000137261	tier1	-	-	60	0	0.00	34	12	26.09
KIF16B	0	genome.wustl.edu	37	20	16360078	16360078	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	20	16360078	16360078	C	T	SNP	KIF16B	ENST00000408042	human	ensembl	74_37	-1	known	missense	c.2569	p.E857K	0.997	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF16B	HGNC	ENSG00000089177	tier1	-	-	62	0	0.00	32	13	28.89
KMT2D	0	genome.wustl.edu	37	12	49418397	49418397	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	12	49418397	49418397	G	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.16016	p.A5339V	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	60	0	0.00	60	4	6.25
KRTAP10-7	0	genome.wustl.edu	37	21	46020662	46020663	+	Frame_Shift_Ins	INS	-	-	GA			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	21	46020662	46020663	-	GA	INS	KRTAP10-7	ENST00000380102	human	ensembl	74_37	+1	known	frame_shift_ins	c.141_142	p.A47fs	0.713:0.752	NULL	NULL	-	no_errors	KRTAP10-7	HGNC	ENSG00000205441	tier1			66	0	0.00	17	2	10.53
LAMA1	0	genome.wustl.edu	37	18	6959479	6959479	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	18	6959479	6959479	C	T	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.7639	p.V2547I	0.994	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	-	-	73	0	0.00	24	58	70.73
LAMA5	0	genome.wustl.edu	37	20	60912701	60912701	+	Silent	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	20	60912701	60912701	C	T	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	silent	c.2109	p.T703	0.000	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	tier1	rs143941434	-	51	0	0.00	61	12	16.44
LARS2	0	genome.wustl.edu	37	3	45588891	45588891	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	3	45588891	45588891	C	G	SNP	LARS2	ENST00000265537	human	ensembl	74_37	+1	known	missense	c.2581	p.R861G	0.989	tigrfam_Leu-tRNA-ligase_bac/mito	pfam_aa-tRNA-synth_Ia,pfam_Methionyl/Leucyl_tRNA_Synth,pfam_V/L/I-tRNA-synth_anticodon-bd,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Val/Leu/Ile-tRNA-synth_edit,prints_Leu-tRNA-ligase_bac/mito,tigrfam_Leu-tRNA-ligase_bac/mito	-	no_errors	LARS2	HGNC	ENSG00000011376	tier1	-	-	79	0	0.00	22	29	56.86
LCE2D	0	genome.wustl.edu	37	1	152636848	152636848	+	Silent	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	152636848	152636848	C	T	SNP	LCE2D	ENST00000368784	human	ensembl	74_37	+1	known	silent	c.267	p.P89	0.002	NULL	NULL	-	no_errors	LCE2D	HGNC	ENSG00000187223	tier1	-	-	104	0	0.00	93	36	27.91
LEO1	0	genome.wustl.edu	37	15	52254643	52254643	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	15	52254643	52254643	G	T	SNP	LEO1	ENST00000299601	human	ensembl	74_37	-1	known	missense	c.862	p.R288S	1.000	NULL	pfam_Leo1	-	no_errors	LEO1	HGNC	ENSG00000166477	tier1	-	-	71	0	0.00	67	4	5.63
LIG4	0	genome.wustl.edu	37	13	108861355	108861355	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	13	108861355	108861355	A	T	SNP	LIG4	ENST00000356922	human	ensembl	74_37	-1	known	missense	c.2262	p.F754L	1.000	pfam_DNA_ligase_IV	pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_DNA_ligase_IV,pfam_BRCT_dom,pfam_DNA_ligase_ATP-dep_C,superfamily_NA-bd_OB-fold,superfamily_BRCT_dom,superfamily_DNA_ligase_ATP-dep_N,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	-	no_errors	LIG4	HGNC	ENSG00000174405	tier1	-	-	57	0	0.00	18	17	48.57
LINC00905	0	genome.wustl.edu	37	19	16144930	16144930	+	RNA	SNP	G	G	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	16144930	16144930	G	C	SNP	LINC00905	ENST00000588838	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.498	-	-	-	no_errors	LINC00905	HGNC	ENSG00000167459	tier1	-	-	52	0	0.00	142	8	5.33
LINC00943	0	genome.wustl.edu	37	12	127229599	127229599	+	RNA	SNP	T	T	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	12	127229599	127229599	T	C	SNP	LINC00943	ENST00000345111	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00943	HGNC	ENSG00000189238	tier1	-	-	66	0	0.00	31	10	24.39
LMTK2	0	genome.wustl.edu	37	7	97821506	97821506	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	97821506	97821506	G	A	SNP	LMTK2	ENST00000297293	human	ensembl	74_37	+1	known	missense	c.1729	p.D577N	0.975	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK2	HGNC	ENSG00000164715	tier1	-	-	111	0	0.00	53	39	42.39
LOC101929532	0	genome.wustl.edu	37	2	163027647	163027647	+	RNA	SNP	T	T	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	2	163027647	163027647	T	G	SNP	LOC101929532	ENST00000418968	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC007750.5	Clone_based_vega_gene	ENSG00000236841	tier1	-	-	22	0	0.00	8	10	55.56
LOC101929583	0	genome.wustl.edu	37	9	42856234	42856234	+	RNA	SNP	T	T	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	9	42856234	42856234	T	C	SNP	LOC101929583	ENST00000412301	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AC129778.2	Clone_based_vega_gene	ENSG00000184906	tier1	-	-	82	0	0.00	8	2	20.00
LOXHD1	0	genome.wustl.edu	37	18	44065079	44065079	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	18	44065079	44065079	C	T	SNP	LOXHD1	ENST00000536736	human	ensembl	74_37	-1	known	missense	c.5899	p.E1967K	1.000	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,pfscan_PLAT/LH2_dom	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom	-	no_errors	LOXHD1	HGNC	ENSG00000167210	tier1	-	-	61	0	0.00	22	11	33.33
LRCH4	0	genome.wustl.edu	37	7	100180051	100180051	+	Silent	SNP	G	G	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	100180051	100180051	G	C	SNP	LRCH4	ENST00000310300	human	ensembl	74_37	-1	known	silent	c.252	p.P84	0.005	NULL	pfam_Leu-rich_rpt,pfam_CH-domain,superfamily_CH-domain,smart_Leu-rich_rpt_typical-subtyp,smart_CH-domain,pfscan_CH-domain	-	no_errors	LRCH4	HGNC	ENSG00000077454	tier1	-	-	83	0	0.00	87	12	12.12
LRP12	0	genome.wustl.edu	37	8	105601095	105601095	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	8	105601095	105601095	G	A	SNP	LRP12	ENST00000424843	human	ensembl	74_37	-1	known	missense	c.31	p.P11S	1.000	NULL	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1	-	-	132	0	0.00	68	88	56.41
LRRC39	0	genome.wustl.edu	37	1	100626108	100626108	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	100626108	100626108	C	T	SNP	LRRC39	ENST00000370138	human	ensembl	74_37	-1	known	missense	c.133	p.E45K	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC39	HGNC	ENSG00000122477	tier1	-	-	94	0	0.00	28	18	39.13
LRRC4B	0	genome.wustl.edu	37	19	51021013	51021013	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	51021013	51021013	G	A	SNP	LRRC4B	ENST00000389201	human	ensembl	74_37	-1	known	missense	c.1957	p.P653S	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRC4B	HGNC	ENSG00000131409	tier1	-	-	33	0	0.00	33	4	10.81
LSP1	0	genome.wustl.edu	37	11	1907990	1907990	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	1907990	1907990	G	A	SNP	LSP1	ENST00000311604	human	ensembl	74_37	+1	known	missense	c.746	p.R249H	0.999	pfam_Caldesmon_LSP,prints_Lymphspecific	pfam_Caldesmon_LSP,prints_Lymphspecific	-	no_errors	LSP1	HGNC	ENSG00000130592	tier1	rs147990493	-	99	0	0.00	11	45	80.36
LY75	0	genome.wustl.edu	37	2	160734874	160734874	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	2	160734874	160734874	G	A	SNP	LY75	ENST00000554112	human	ensembl	74_37	-1	known	missense	c.1735	p.R579W	0.120	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin	-	no_errors	LY75	HGNC	ENSG00000054219	tier1	-	-	67	0	0.00	45	9	16.67
MAN2B2	0	genome.wustl.edu	37	4	6577022	6577023	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	4	6577022	6577023	-	A	INS	MAN2B2	ENST00000285599	human	ensembl	74_37	+1	known	frame_shift_ins	c.85_86	p.A29fs	0.745:0.837	pfam_Glyco_hydro_38_N,superfamily_Glyco_hydro/deAcase_b/a-brl	pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2B2	HGNC	ENSG00000013288	tier1			9	0	0.00	4	2	33.33
MAP1B	0	genome.wustl.edu	37	5	71495042	71495042	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	5	71495042	71495042	G	A	SNP	MAP1B	ENST00000296755	human	ensembl	74_37	+1	known	missense	c.5860	p.G1954R	0.020	NULL	pfam_MAP1B_neuraxin	-	no_errors	MAP1B	HGNC	ENSG00000131711	tier1	-	-	98	0	0.00	31	14	31.11
MICAL2	0	genome.wustl.edu	37	11	12183842	12183842	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	12183842	12183842	G	T	SNP	MICAL2	ENST00000256194	human	ensembl	74_37	+1	known	missense	c.140	p.R47I	0.998	NULL	pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,pfam_FAD_bind_dom,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,prints_Rng_hydrolase-like	-	no_errors	MICAL2	HGNC	ENSG00000133816	tier1	-	-	85	0	0.00	44	23	34.33
MLLT4-AS1	0	genome.wustl.edu	37	6	168227370	168227370	+	RNA	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	168227370	168227370	C	A	SNP	MLLT4-AS1	ENST00000359760	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.949	-	-	-	no_errors	MLLT4-AS1	HGNC	ENSG00000198221	tier1	-	-	51	0	0.00	19	24	55.81
MT-CO1	0	genome.wustl.edu	37	MT	6267	6267	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	MT	6267	6267	G	A	SNP	MT-CO1	ENST00000361624	human	ensembl	74_37	+1	known	missense	c.364	p.A122T	NULL	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom,prints_Cyt_c_Oxase_su1	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom,prints_Cyt_c_Oxase_su1	-	no_errors	MT-CO1	HGNC	ENSG00000198804	tier1	rs202216551	-	145	0	0.00	8	2	20.00
MT-ND5	0	genome.wustl.edu	37	MT	12682	12682	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	MT	12682	12682	C	T	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	nonsense	c.346	p.Q116*	NULL	pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1	-	-	140	0	0.00	0	7	100.00
MT-RNR1	0	genome.wustl.edu	37	MT	1543	1543	+	RNA	SNP	T	T	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	MT	1543	1543	T	A	SNP	MT-RNR1	ENST00000389680	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR1	HGNC	ENSG00000211459	tier1	-	-	149	0	0.00	8	2	20.00
MTERF	0	genome.wustl.edu	37	7	91509448	91509448	+	RNA	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	91509448	91509448	C	A	SNP	MTERF	ENST00000481516	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MTERF	HGNC	ENSG00000127989	tier1	-	-	38	0	0.00	17	5	22.73
MVP	0	genome.wustl.edu	37	16	29856136	29856136	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	16	29856136	29856136	G	A	SNP	MVP	ENST00000357402	human	ensembl	74_37	+1	known	missense	c.1957	p.A653T	1.000	NULL	pfam_Vault_N,pfam_MVP_shoulder	-	no_errors	MVP	HGNC	ENSG00000013364	tier1	-	-	70	0	0.00	53	18	25.35
MYADM	0	genome.wustl.edu	37	19	54377589	54377589	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	54377589	54377589	G	A	SNP	MYADM	ENST00000336967	human	ensembl	74_37	+1	known	missense	c.806	p.G269D	0.771	pfam_Marvel	pfam_Marvel	-	no_errors	MYADM	HGNC	ENSG00000179820				54	0	0.00	50	4	7.41
MYH3	0	genome.wustl.edu	37	17	10542658	10542658	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	10542658	10542658	G	T	SNP	MYH3	ENST00000226209	human	ensembl	74_37	-1	known	missense	c.3059	p.S1020Y	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH3	HGNC	ENSG00000109063	tier1	-	-	76	0	0.00	32	4	11.11
NACA	0	genome.wustl.edu	37	12	57106389	57106389	+	RNA	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	12	57106389	57106389	C	T	SNP	NACA	ENST00000548386	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NACA	HGNC	ENSG00000196531	tier1	-	-	83	0	0.00	38	7	15.56
NACA	0	genome.wustl.edu	37	12	57106408	57106408	+	RNA	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	12	57106408	57106408	C	T	SNP	NACA	ENST00000548386	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.299	-	-	-	no_errors	NACA	HGNC	ENSG00000196531	tier1	-	-	64	0	0.00	31	6	16.22
NAPB	0	genome.wustl.edu	37	20	23383645	23383645	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	20	23383645	23383645	C	G	SNP	NAPB	ENST00000377026	human	ensembl	74_37	-1	known	missense	c.163	p.A55P	1.000	prints_NSF_attach	prints_NSF_attach	-	no_errors	NAPB	HGNC	ENSG00000125814	tier1	-	-	88	0	0.00	57	18	24.00
NAT8L	0	genome.wustl.edu	37	4	2065507	2065507	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	4	2065507	2065507	G	A	SNP	NAT8L	ENST00000423729	human	ensembl	74_37	+1	known	missense	c.562	p.V188M	1.000	superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_GNAT_dom,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	NAT8L	HGNC	ENSG00000185818	tier1	-	-	67	0	0.00	21	28	56.00
NEB	0	genome.wustl.edu	37	2	152466583	152466583	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	2	152466583	152466583	G	A	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	nonsense	c.12070	p.Q4024*	0.986	smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091	tier1	-	-	55	0	0.00	33	18	35.29
NEUROD4	0	genome.wustl.edu	37	12	55421010	55421010	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	12	55421010	55421010	T	G	SNP	NEUROD4	ENST00000242994	human	ensembl	74_37	+1	known	missense	c.787	p.F263V	1.000	pfam_Neurogenic_DUF,pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	-	no_errors	NEUROD4	HGNC	ENSG00000123307	tier1	-	-	68	0	0.00	47	8	14.55
NHLRC3	0	genome.wustl.edu	37	13	39613842	39613842	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	13	39613842	39613842	G	A	SNP	NHLRC3	ENST00000379600	human	ensembl	74_37	+1	known	missense	c.379	p.G127R	1.000	NULL	pfam_NHL_repeat,pfscan_NHL_repeat_subgr	-	no_errors	NHLRC3	HGNC	ENSG00000188811	tier1	-	-	99	0	0.00	128	22	14.57
NIT1	0	genome.wustl.edu	37	1	161088851	161088851	+	RNA	SNP	A	A	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	161088851	161088851	A	T	SNP	NIT1	ENST00000461376	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NIT1	HGNC	ENSG00000158793	tier1	-	-	26	0	0.00	21	18	45.00
NKRF	0	genome.wustl.edu	37	X	118723469	118723469	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	X	118723469	118723469	G	A	SNP	NKRF	ENST00000542113	human	ensembl	74_37	-1	known	missense	c.1964	p.A655V	1.000	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	pfam_G_patch_dom,pfam_R3H_ss-bd,smart_dsRNA-bd_dom,smart_G_patch_dom,smart_R3H_ss-bd,pfscan_G_patch_dom,pfscan_R3H_ss-bd	-	no_errors	NKRF	HGNC	ENSG00000186416	tier1	-	-	21	0	0.00	5	34	87.18
NLRC3	0	genome.wustl.edu	37	16	3614982	3614982	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	16	3614982	3614982	C	T	SNP	NLRC3	ENST00000448023	human	ensembl	74_37	-1	known	missense	c.197	p.G66D	0.590	NULL	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRC3	HGNC	ENSG00000167984				17	0	0.00	17	4	19.05
NME8	0	genome.wustl.edu	37	7	37896931	37896931	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	37896931	37896931	T	A	SNP	NME8	ENST00000199447	human	ensembl	74_37	+1	known	missense	c.254	p.V85D	0.993	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Nucleoside_diP_kinase,pfam_Thioredoxin_domain,superfamily_Nucleoside_diP_kinase,superfamily_Thioredoxin-like_fold,smart_Nucleoside_diP_kinase	-	no_errors	NME8	HGNC	ENSG00000086288	tier1	-	-	42	0	0.00	32	13	28.89
NOX4	0	genome.wustl.edu	37	11	89224050	89224050	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	89224050	89224050	G	T	SNP	NOX4	ENST00000413594	human	ensembl	74_37	-1	known	missense	c.91	p.L31I	0.009	NULL	pfam_Fe_red_NAD-bd_6,pfam_Fe3_Rdtase_TM_dom,pfam_FAD-bd_8,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	NOX4	HGNC	ENSG00000086991	tier1	-	-	19	0	0.00	0	4	100.00
NUDT8	0	genome.wustl.edu	37	11	67395621	67395621	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	67395621	67395621	G	A	SNP	NUDT8	ENST00000376693	human	ensembl	74_37	-1	known	silent	c.507	p.P169	0.048	superfamily_NUDIX_hydrolase_dom-like	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	NUDT8	HGNC	ENSG00000167799	tier1	-	-	54	0	0.00	41	387	90.42
NUP153	0	genome.wustl.edu	37	6	17675153	17675153	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	17675153	17675153	G	A	SNP	NUP153	ENST00000537253	human	ensembl	74_37	-1	known	nonsense	c.835	p.R279*	0.338	pfam_Nucleoporin_Nup153	pfam_Nucleoporin_Nup153,pfam_Znf_RanBP2,pfam_Retro-transposon_transp_CS,smart_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	NUP153	HGNC	ENSG00000124789	tier1	-	-	115	0	0.00	89	14	13.59
NUP188	0	genome.wustl.edu	37	9	131742885	131742885	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	9	131742885	131742885	G	A	SNP	NUP188	ENST00000372577	human	ensembl	74_37	+1	known	missense	c.1270	p.E424K	1.000	pfam_Nucleoporin_Nup188	pfam_Nucleoporin_Nup188,superfamily_ARM-type_fold	-	no_errors	NUP188	HGNC	ENSG00000095319	tier1	-	-	113	0	0.00	107	10	8.55
OR4P4	0	genome.wustl.edu	37	11	55406281	55406281	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	55406281	55406281	G	T	SNP	OR4P4	ENST00000314612	human	ensembl	74_37	+1	known	nonsense	c.448	p.G150*	0.565	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4P4	HGNC	ENSG00000181927	tier1	-	-	52	0	0.00	2	32	94.12
OR52E8	0	genome.wustl.edu	37	11	5878912	5878912	+	Silent	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	5878912	5878912	C	T	SNP	OR52E8	ENST00000537935	human	ensembl	74_37	-1	known	silent	c.21	p.T7	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52E8	HGNC	ENSG00000183269	tier1	-	-	62	0	0.00	6	26	81.25
OR5L2	0	genome.wustl.edu	37	11	55595135	55595135	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	55595135	55595135	C	A	SNP	OR5L2	ENST00000378397	human	ensembl	74_37	+1	known	nonsense	c.441	p.C147*	0.010	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5L2	HGNC	ENSG00000205030	tier1	-	-	62	0	0.00	30	17	36.17
OTOF	0	genome.wustl.edu	37	2	26698861	26698861	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	2	26698861	26698861	C	A	SNP	OTOF	ENST00000272371	human	ensembl	74_37	-1	known	missense	c.2912	p.S971I	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	OTOF	HGNC	ENSG00000115155	tier1	-	-	99	0	0.00	84	30	26.32
OTOG	0	genome.wustl.edu	37	11	17634199	17634199	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	17634199	17634199	G	A	SNP	OTOG	ENST00000399391	human	ensembl	74_37	+1	known	missense	c.6361	p.V2121M	0.979	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_AbfB,pfam_TIL_dom,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom	-	no_errors	OTOG	HGNC	ENSG00000188162	tier1	-	-	77	0	0.00	6	32	84.21
PATL2	0	genome.wustl.edu	37	15	44961491	44961491	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	15	44961491	44961491	G	A	SNP	PATL2	ENST00000434130	human	ensembl	74_37	-1	known	nonsense	c.1051	p.Q351*	0.999	pfam_Topo_II-assoc_PAT1	pfam_Topo_II-assoc_PAT1	-	no_errors	PATL2	HGNC	ENSG00000229474				36	0	0.00	35	8	18.60
PCGF2	0	genome.wustl.edu	37	17	36892390	36892390	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	36892390	36892390	C	T	SNP	PCGF2	ENST00000360797	human	ensembl	74_37	-1	known	missense	c.610	p.E204K	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PCGF2	HGNC	ENSG00000056661	tier1	-	-	29	0	0.00	37	21	36.21
PCGF2	0	genome.wustl.edu	37	17	36892391	36892391	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	36892391	36892391	C	A	SNP	PCGF2	ENST00000579882	human	ensembl	74_37	-1	putative	nonsense	c.613	p.G205*	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PCGF2	HGNC	ENSG00000056661	tier1	-	-	29	0	0.00	37	21	36.21
PCOLCE2	0	genome.wustl.edu	37	3	142561781	142561781	+	Silent	SNP	T	T	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	3	142561781	142561781	T	A	SNP	PCOLCE2	ENST00000295992	human	ensembl	74_37	-1	known	silent	c.558	p.V186	0.992	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Netrin_module_non-TIMP,superfamily_CUB_dom,superfamily_TIMP-like_OB-fold,smart_CUB_dom,smart_Netrin_module_non-TIMP,pfscan_CUB_dom,pfscan_Netrin_domain	-	no_errors	PCOLCE2	HGNC	ENSG00000163710	tier1	-	-	63	0	0.00	64	17	20.99
PFKFB1	0	genome.wustl.edu	37	X	54961428	54961428	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	X	54961428	54961428	G	T	SNP	PFKFB1	ENST00000375006	human	ensembl	74_37	-1	known	missense	c.1243	p.L415I	1.000	pirsf_Bifunct_6PFK/fruc_bisP_Ptase	pfam_6Phosfructo_kin,pfam_His_Pase_superF_clade-1,pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase,smart_His_Pase_superF_clade-1,pirsf_Bifunct_6PFK/fruc_bisP_Ptase,prints_6Pfruct_kin	-	no_errors	PFKFB1	HGNC	ENSG00000158571	tier1	-	-	33	0	0.00	31	4	11.43
PHTF1	0	genome.wustl.edu	37	1	114269063	114269063	+	Silent	SNP	T	T	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	114269063	114269063	T	C	SNP	PHTF1	ENST00000369604	human	ensembl	74_37	-1	known	silent	c.465	p.G155	0.994	pfam_TF_homeodomain_male	pfam_TF_homeodomain_male	-	no_errors	PHTF1	HGNC	ENSG00000116793	tier1	-	-	62	0	0.00	7	20	74.07
PI4KA	0	genome.wustl.edu	37	22	21157593	21157593	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	22	21157593	21157593	A	T	SNP	PI4KA	ENST00000255882	human	ensembl	74_37	-1	known	missense	c.1477	p.C493S	1.000	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PI4KA	HGNC	ENSG00000241973	tier1	-	-	71	0	0.00	71	13	15.48
PIEZO1	0	genome.wustl.edu	37	16	88787614	88787614	+	Silent	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	16	88787614	88787614	C	T	SNP	PIEZO1	ENST00000301015	human	ensembl	74_37	-1	novel	silent	c.5628	p.R1876	0.190	NULL	pfam_Piezo	-	no_errors	PIEZO1	HGNC	ENSG00000103335				80	0	0.00	57	5	8.06
PIN1P1	0	genome.wustl.edu	37	1	70385058	70385058	+	RNA	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	70385058	70385058	C	A	SNP	PIN1P1	ENST00000412108	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.646	-	-	-	no_errors	PIN1P1	HGNC	ENSG00000229359	tier1	-	-	85	0	0.00	40	18	31.03
PLCE1	0	genome.wustl.edu	37	10	96039597	96039597	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	10	96039597	96039597	G	A	SNP	PLCE1	ENST00000260766	human	ensembl	74_37	+1	known	missense	c.4724	p.R1575Q	0.467	superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_Ras-assoc,pfam_RasGRF_CDC25,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_Ras_GEF_dom,superfamily_C2_dom,smart_RasGRF_CDC25,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,smart_Ras-assoc,pfscan_C2_dom,pfscan_Ras-assoc,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,pfscan_RasGRF_CDC25,prints_Pinositol_PLipase_C	-	no_errors	PLCE1	HGNC	ENSG00000138193	tier1	-	-	68	0	0.00	60	14	18.92
PLCH1	0	genome.wustl.edu	37	3	155198837	155198837	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	3	155198837	155198837	A	T	SNP	PLCH1	ENST00000340059	human	ensembl	74_37	-1	known	missense	c.5002	p.F1668I	0.049	NULL	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCH1	HGNC	ENSG00000114805	tier1	-	-	80	0	0.00	47	10	17.54
PLEKHA6	0	genome.wustl.edu	37	1	204192692	204192692	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	204192692	204192692	G	T	SNP	PLEKHA6	ENST00000272203	human	ensembl	74_37	-1	known	missense	c.3053	p.P1018H	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850	tier1	-	-	119	0	0.00	54	79	59.40
PLXDC1	0	genome.wustl.edu	37	17	37288207	37288207	+	RNA	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	37288207	37288207	G	A	SNP	PLXDC1	ENST00000493200	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	PLXDC1	HGNC	ENSG00000161381	tier1	-	-	71	0	0.00	152	1023	86.99
PLXDC1	0	genome.wustl.edu	37	17	37288288	37288288	+	RNA	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	37288288	37288288	G	A	SNP	PLXDC1	ENST00000493200	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	PLXDC1	HGNC	ENSG00000161381	tier1	rs201621484	-	65	0	0.00	141	901	86.47
PLXDC1	0	genome.wustl.edu	37	17	37309219	37309219	+	RNA	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	37309219	37309219	C	T	SNP	PLXDC1	ENST00000577941	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PLXDC1	HGNC	ENSG00000161381	tier1	-	-	58	0	0.00	119	519	81.35
PLXNA4	0	genome.wustl.edu	37	7	131825389	131825389	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	131825389	131825389	C	T	SNP	PLXNA4	ENST00000321063	human	ensembl	74_37	-1	known	missense	c.5407	p.D1803N	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA4	HGNC	ENSG00000221866	tier1	-	-	116	0	0.00	46	33	41.77
PNISR	0	genome.wustl.edu	37	6	99849058	99849058	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	99849058	99849058	T	G	SNP	PNISR	ENST00000369239	human	ensembl	74_37	-1	known	missense	c.1776	p.R592S	1.000	NULL	NULL	-	no_errors	PNISR	HGNC	ENSG00000132424	tier1	-	-	58	0	0.00	21	18	46.15
POTEH-AS1	0	genome.wustl.edu	37	22	16277955	16277955	+	RNA	SNP	A	A	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	22	16277955	16277955	A	G	SNP	POTEH-AS1	ENST00000422014	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	POTEH-AS1	HGNC	ENSG00000236666	tier1	-	-	24	0	0.00	7	3	30.00
POU6F2	0	genome.wustl.edu	37	7	39379547	39379547	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	39379547	39379547	C	T	SNP	POU6F2	ENST00000403058	human	ensembl	74_37	+1	known	missense	c.818	p.P273L	1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU6F2	HGNC	ENSG00000106536	tier1	rs144939808	-	55	0	0.00	34	57	62.64
PRAMEF2	0	genome.wustl.edu	37	1	12918962	12918962	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	12918962	12918962	G	A	SNP	PRAMEF2	ENST00000240189	human	ensembl	74_37	+1	known	missense	c.98	p.R33K	0.000	NULL	NULL	-	no_errors	PRAMEF2	HGNC	ENSG00000120952	tier1	-	-	155	0	0.00	60	35	36.84
PRDM15	0	genome.wustl.edu	37	21	43274682	43274682	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	21	43274682	43274682	G	A	SNP	PRDM15	ENST00000269844	human	ensembl	74_37	-1	known	silent	c.1629	p.G543	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM15	HGNC	ENSG00000141956				82	0	0.00	46	3	6.12
PREX2	0	genome.wustl.edu	37	8	68993013	68993013	+	Silent	SNP	A	A	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	8	68993013	68993013	A	T	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	silent	c.1818	p.G606	0.442	superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889	tier1	-	-	137	0	0.00	104	33	24.09
PRIMA1	0	genome.wustl.edu	37	14	94187802	94187802	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	14	94187802	94187802	G	A	SNP	PRIMA1	ENST00000393140	human	ensembl	74_37	-1	known	silent	c.450	p.N150	0.929	NULL	NULL	-	no_errors	PRIMA1	HGNC	ENSG00000175785	tier1	-	-	44	0	0.00	19	9	32.14
PRKRIR	0	genome.wustl.edu	37	11	76072076	76072076	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	76072076	76072076	G	A	SNP	PRKRIR	ENST00000260045	human	ensembl	74_37	-1	known	missense	c.242	p.A81V	1.000	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	pfam_Znf_C2CH,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	PRKRIR	HGNC	ENSG00000137492				108	0	0.00	52	5	8.77
PRSS3	0	genome.wustl.edu	37	9	33798037	33798037	+	Silent	SNP	T	T	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	9	33798037	33798037	T	C	SNP	PRSS3	ENST00000361005	human	ensembl	74_37	+1	known	silent	c.582	p.T194	0.688	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS3	HGNC	ENSG00000010438				64	0	0.00	38	4	9.52
PSD3	0	genome.wustl.edu	37	8	18541566	18541566	+	RNA	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	8	18541566	18541566	C	T	SNP	PSD3	ENST00000521878	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.846	-	-	-	no_errors	PSD3	HGNC	ENSG00000156011	tier1	-	-	25	0	0.00	3	9	75.00
PSME2	0	genome.wustl.edu	37	14	24612868	24612868	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	14	24612868	24612868	C	T	SNP	PSME2	ENST00000216802	human	ensembl	74_37	-1	known	missense	c.565	p.A189T	1.000	pfam_Proteasome_activ_pa28_C,superfamily_Proteasome_activ_pa28	pfam_Proteasome_activ_pa28_C,pfam_Proteasome_activ_pa28_N,superfamily_Proteasome_activ_pa28	-	no_errors	PSME2	HGNC	ENSG00000100911	tier1	-	-	61	0	0.00	31	11	26.19
PTEN	0	genome.wustl.edu	37	10	89711968	89711968	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	10	89711968	89711968	C	T	SNP	PTEN	ENST00000371953	human	ensembl	74_37	+1	known	missense	c.586	p.H196Y	1.000	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tensin_phosphatase_C2-dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_dom,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862				33	0	0.00	35	2	5.41
PTPRN2	0	genome.wustl.edu	37	7	157903567	157903567	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	157903567	157903567	C	T	SNP	PTPRN2	ENST00000404321	human	ensembl	74_37	-1	known	missense	c.1666	p.V556I	0.000	pfam_Receptor_IA-2	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Receptor_IA-2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRN2	HGNC	ENSG00000155093	tier1	-	-	61	0	0.00	32	25	43.86
PTPRZ1	0	genome.wustl.edu	37	7	121659264	121659264	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	121659264	121659264	G	A	SNP	PTPRZ1	ENST00000393386	human	ensembl	74_37	+1	known	missense	c.4930	p.V1644M	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRZ1	HGNC	ENSG00000106278	tier1	-	-	100	0	0.00	59	40	40.40
RAB3GAP1	0	genome.wustl.edu	37	2	135911238	135911238	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	2	135911238	135911238	C	T	SNP	RAB3GAP1	ENST00000264158	human	ensembl	74_37	+1	known	missense	c.2081	p.S694F	0.082	NULL	NULL	-	no_errors	RAB3GAP1	HGNC	ENSG00000115839	tier1	-	-	57	0	0.00	55	10	15.38
RABL5	0	genome.wustl.edu	37	7	100962252	100962252	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	100962252	100962252	G	T	SNP	RABL5	ENST00000315322	human	ensembl	74_37	-1	known	missense	c.101	p.P34Q	1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_MIRO-like,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_MIRO-like,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase	-	no_errors	RABL5	HGNC	ENSG00000128581				61	0	0.00	73	4	5.19
RAD9A	0	genome.wustl.edu	37	11	67165003	67165003	+	Silent	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	67165003	67165003	G	T	SNP	RAD9A	ENST00000307980	human	ensembl	74_37	+1	known	silent	c.1149	p.L383	1.000	pirsf_Rad9	pfam_Rad9/Ddc1,pirsf_Rad9	-	no_errors	RAD9A	HGNC	ENSG00000172613				48	0	0.00	24	9	27.27
RCAN3	0	genome.wustl.edu	37	1	24857853	24857853	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	24857853	24857853	G	A	SNP	RCAN3	ENST00000374395	human	ensembl	74_37	+1	known	missense	c.341	p.G114E	1.000	pfam_Calcipressin	pfam_Calcipressin	-	no_errors	RCAN3	HGNC	ENSG00000117602	tier1	-	-	60	0	0.00	26	17	39.53
REEP3	0	genome.wustl.edu	37	10	65359025	65359025	+	Silent	SNP	T	T	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	10	65359025	65359025	T	A	SNP	REEP3	ENST00000373758	human	ensembl	74_37	+1	known	silent	c.399	p.A133	0.256	NULL	pfam_TB2_DP1_HVA22	-	no_errors	REEP3	HGNC	ENSG00000165476				41	0	0.00	38	7	15.56
RIC8A	0	genome.wustl.edu	37	11	209369	209369	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	209369	209369	G	A	SNP	RIC8A	ENST00000527696	human	ensembl	74_37	+1	putative	missense	c.77	p.R26K	0.001	NULL	pfam_Gua_nucleotide_exch_fac_Ric8,superfamily_ARM-type_fold,prints_Synembryn	-	no_errors	RIC8A	HGNC	ENSG00000177963	tier1	-	-	94	0	0.00	8	47	85.45
RN7SL185P	0	genome.wustl.edu	37	15	32686600	32686600	+	RNA	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	15	32686600	32686600	C	T	SNP	RN7SL185P	ENST00000492212	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.046	-	-	-	no_errors	RN7SL185P	HGNC	ENSG00000241459	tier1	-	-	55	0	0.00	36	6	14.29
RNF19B	0	genome.wustl.edu	37	1	33412075	33412075	+	Silent	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	33412075	33412075	C	T	SNP	RNF19B	ENST00000373456	human	ensembl	74_37	-1	known	silent	c.1077	p.V359	0.997	NULL	pfam_Znf_C6HC,smart_Znf_RING,smart_Znf_C6HC,pfscan_Znf_RING	-	no_errors	RNF19B	HGNC	ENSG00000116514	tier1	-	-	69	0	0.00	22	12	35.29
RNLS	0	genome.wustl.edu	37	10	90074274	90074274	+	Silent	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	10	90074274	90074274	C	T	SNP	RNLS	ENST00000331772	human	ensembl	74_37	-1	known	silent	c.825	p.P275	0.993	pfam_Amino_oxidase	pfam_Amino_oxidase	-	no_errors	RNLS	HGNC	ENSG00000184719	tier1	rs201629674	-	109	0	0.00	52	25	32.47
RNLS	0	genome.wustl.edu	37	10	90342968	90342968	+	RNA	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	10	90342968	90342968	C	T	SNP	RNLS	ENST00000466945	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RNLS	HGNC	ENSG00000184719	tier1	-	-	41	0	0.00	22	14	38.89
RP1	0	genome.wustl.edu	37	8	55542526	55542526	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	8	55542526	55542526	G	A	SNP	RP1	ENST00000220676	human	ensembl	74_37	+1	known	silent	c.6084	p.L2028	0.000	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237	tier1	-	-	73	0	0.00	46	20	30.30
RPAP1	0	genome.wustl.edu	37	15	41819264	41819264	+	Silent	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	15	41819264	41819264	G	T	SNP	RPAP1	ENST00000304330	human	ensembl	74_37	-1	known	silent	c.1749	p.V583	0.701	NULL	pfam_RNA_pol_II_AP1_C,pfam_RNA_pol_II_AP1_N,superfamily_ARM-type_fold	-	no_errors	RPAP1	HGNC	ENSG00000103932	tier1	-	-	46	0	0.00	34	4	10.53
RPL23	0	genome.wustl.edu	37	17	37008985	37008985	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	37008985	37008985	C	G	SNP	RPL23	ENST00000479035	human	ensembl	74_37	-1	known	missense	c.98	p.G33A	1.000	pfam_Ribosomal_L14b/L23e,superfamily_Ribosomal_L14_dom	pfam_Ribosomal_L14b/L23e,superfamily_Ribosomal_L14_dom	-	no_errors	RPL23	HGNC	ENSG00000125691	tier1	-	-	51	0	0.00	95	716	88.18
RRAGC	0	genome.wustl.edu	37	1	39325198	39325200	+	In_Frame_Del	DEL	CCG	CCG	-			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	CCG	CCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	39325198	39325200	CCG	0	DEL	RRAGC	ENST00000373001	human	ensembl	74_37	-1	known	in_frame_del	c.121_119	p.A40in_frame_del	0.904:0.792:0.805	NULL	pfam_Gtr1_RagA,pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase	-	no_errors	RRAGC	HGNC	ENSG00000116954				26	0	0.00	4	2	33.33
RYR2	0	genome.wustl.edu	37	1	237947132	237947132	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	237947132	237947132	G	C	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.12138	p.K4046N	0.994	pfscan_EF_hand_dom	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	43	0	0.00	53	5	8.47
RYR3	0	genome.wustl.edu	37	15	33954404	33954404	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	15	33954404	33954404	A	C	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.4673	p.H1558P	1.000	NULL	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	41	0	0.00	19	9	32.14
SALL1	0	genome.wustl.edu	37	16	51174769	51174769	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	16	51174769	51174769	G	A	SNP	SALL1	ENST00000251020	human	ensembl	74_37	-1	known	missense	c.1364	p.A455V	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449	tier1	-	-	63	0	0.00	20	31	60.78
SALL1	0	genome.wustl.edu	37	16	51175993	51175993	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	16	51175993	51175993	C	T	SNP	SALL1	ENST00000251020	human	ensembl	74_37	-1	known	missense	c.140	p.R47Q	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449	tier1	-	-	85	0	0.00	36	27	42.86
SAV1	0	genome.wustl.edu	37	14	51107485	51107485	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	14	51107485	51107485	G	A	SNP	SAV1	ENST00000324679	human	ensembl	74_37	-1	known	silent	c.933	p.Y311	1.000	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_SARAH_dom,pfscan_WW_dom	-	no_errors	SAV1	HGNC	ENSG00000151748	tier1	-	-	111	0	0.00	50	16	24.24
SCN8A	0	genome.wustl.edu	37	12	52099240	52099240	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	12	52099240	52099240	G	A	SNP	SCN8A	ENST00000354534	human	ensembl	74_37	+1	known	missense	c.1174	p.V392I	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,prints_Na_channel_a8su,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN8A	HGNC	ENSG00000196876	tier1	-	-	85	0	0.00	40	31	43.66
SGSM3	0	genome.wustl.edu	37	22	40802502	40802502	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	22	40802502	40802502	C	T	SNP	SGSM3	ENST00000248929	human	ensembl	74_37	+1	known	missense	c.1021	p.P341S	1.000	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_Run,pfam_SH3_domain,pfam_SH3_2,superfamily_Rab-GTPase-TBC_dom,superfamily_SH3_domain,smart_Rab-GTPase-TBC_dom,smart_SH3_domain,smart_Run,pfscan_Run,pfscan_SH3_domain,pfscan_Rab-GTPase-TBC_dom	-	no_errors	SGSM3	HGNC	ENSG00000100359				63	0	0.00	67	4	5.63
SHKBP1	0	genome.wustl.edu	37	19	41096671	41096671	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	41096671	41096671	C	A	SNP	SHKBP1	ENST00000291842	human	ensembl	74_37	+1	known	missense	c.1804	p.L602M	1.000	NULL	pfam_T1-type_BTB,pfam_WD40_repeat,superfamily_BTB/POZ_fold,superfamily_WD40_repeat_dom,smart_BTB/POZ-like,smart_WD40_repeat,pfscan_BTB/POZ-like	-	no_errors	SHKBP1	HGNC	ENSG00000160410	tier1	-	-	79	0	0.00	42	16	27.59
SKAP2	0	genome.wustl.edu	37	7	26779515	26779515	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	7	26779515	26779515	G	A	SNP	SKAP2	ENST00000345317	human	ensembl	74_37	-1	known	missense	c.376	p.R126C	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	SKAP2	HGNC	ENSG00000005020	tier1	-	-	136	0	0.00	151	20	11.70
SLC10A7	0	genome.wustl.edu	37	4	147442807	147442807	+	Silent	SNP	A	A	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	4	147442807	147442807	A	G	SNP	SLC10A7	ENST00000394062	human	ensembl	74_37	-1	known	silent	c.63	p.A21	0.042	pirsf_Put_Na-Bile_cotransptr	pfam_BilAc/Na_symport,pirsf_Put_Na-Bile_cotransptr	-	no_errors	SLC10A7	HGNC	ENSG00000120519	tier1	-	-	80	0	0.00	21	38	64.41
SLC12A5	0	genome.wustl.edu	37	20	44681697	44681697	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	20	44681697	44681697	G	A	SNP	SLC12A5	ENST00000454036	human	ensembl	74_37	+1	known	missense	c.2548	p.D850N	1.000	tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A5	HGNC	ENSG00000124140	tier1	-	-	46	0	0.00	25	13	34.21
SLC1A6	0	genome.wustl.edu	37	19	15061158	15061158	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	15061158	15061158	C	G	SNP	SLC1A6	ENST00000221742	human	ensembl	74_37	-1	known	missense	c.1544	p.G515A	0.997	pfam_Na-dicarboxylate_symporter	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A6	HGNC	ENSG00000105143	tier1	-	-	43	0	0.00	134	16	10.67
SLC24A2	0	genome.wustl.edu	37	9	19516162	19516162	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	9	19516162	19516162	C	T	SNP	SLC24A2	ENST00000341998	human	ensembl	74_37	-1	known	missense	c.1975	p.V659I	0.996	NULL	pfam_NaCa_Exmemb,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A2	HGNC	ENSG00000155886	tier1	rs138630242	-	58	0	0.00	35	12	25.53
SLC47A1	0	genome.wustl.edu	37	17	19451353	19451353	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	19451353	19451353	T	C	SNP	SLC47A1	ENST00000395585	human	ensembl	74_37	+1	known	missense	c.362	p.L121P	0.997	pfam_MATE,tigrfam_MATE	pfam_MATE,tigrfam_MATE	-	no_errors	SLC47A1	HGNC	ENSG00000142494	tier1	-	-	60	0	0.00	9	12	57.14
SLC4A8	0	genome.wustl.edu	37	12	51855063	51855063	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	12	51855063	51855063	C	G	SNP	SLC4A8	ENST00000453097	human	ensembl	74_37	+1	known	missense	c.1089	p.I363M	1.000	pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A8	HGNC	ENSG00000050438	tier1	-	-	50	0	0.00	28	4	12.50
SLCO1C1	0	genome.wustl.edu	37	12	20885992	20885992	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	12	20885992	20885992	G	T	SNP	SLCO1C1	ENST00000381552	human	ensembl	74_37	+1	known	missense	c.1336	p.G446C	1.000	pfam_OA_transporter,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO1C1	HGNC	ENSG00000139155	tier1	-	-	77	0	0.00	61	5	7.46
SLFN12	0	genome.wustl.edu	37	17	33738520	33738520	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	33738520	33738520	G	T	SNP	SLFN12	ENST00000304905	human	ensembl	74_37	-1	known	missense	c.1574	p.T525K	0.000	NULL	pfam_ATPase_AAA-4	-	no_errors	SLFN12	HGNC	ENSG00000172123	tier1	-	-	104	0	0.00	62	4	6.06
SNX18	0	genome.wustl.edu	37	5	53814766	53814766	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	5	53814766	53814766	G	A	SNP	SNX18	ENST00000326277	human	ensembl	74_37	+1	known	silent	c.984	p.P328	0.138	pfam_Phox,superfamily_Phox,smart_Phox,pirsf_Snx9,pfscan_Phox	pfam_Sorting_nexin_WASP-bd-dom,pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_SH3_domain,smart_Phox,pirsf_Snx9,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SNX18	HGNC	ENSG00000178996	tier1	-	-	88	0	0.00	10	30	75.00
SOCS6	0	genome.wustl.edu	37	18	67992659	67992659	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	18	67992659	67992659	C	A	SNP	SOCS6	ENST00000397942	human	ensembl	74_37	+1	known	missense	c.755	p.A252E	0.916	NULL	pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS6	HGNC	ENSG00000170677				49	0	0.00	26	2	6.90
SON	0	genome.wustl.edu	37	21	34927065	34927065	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	21	34927065	34927065	C	A	SNP	SON	ENST00000356577	human	ensembl	74_37	+1	known	missense	c.5528	p.S1843Y	1.000	NULL	pfam_G_patch_dom,superfamily_WD40_repeat_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_dsRNA-bd_dom	-	no_errors	SON	HGNC	ENSG00000159140	tier1	-	-	34	0	0.00	14	24	63.16
SOX11	0	genome.wustl.edu	37	2	5833526	5833528	+	In_Frame_Del	DEL	GAC	GAC	-			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	GAC	GAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	2	5833526	5833528	GAC	-	DEL	SOX11	ENST00000322002	human	ensembl	74_37	+1	known	in_frame_del	c.673_675	p.D228in_frame_del	1.000:1.000:0.999	pirsf_SOX-12/11/4a	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pirsf_SOX-12/11/4a,pfscan_HMG_box_dom	-	no_errors	SOX11	HGNC	ENSG00000176887	tier1			19	0	0.00	16	3	15.79
SRL	0	genome.wustl.edu	37	16	4245563	4245563	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	16	4245563	4245563	G	T	SNP	SRL	ENST00000399609	human	ensembl	74_37	-1	known	missense	c.601	p.Q201K	1.000	pfam_Dynamin_GTPase,pfam_GTP_binding_domain,superfamily_P-loop_NTPase	pfam_Dynamin_GTPase,pfam_GTP_binding_domain,superfamily_P-loop_NTPase	-	no_errors	SRL	HGNC	ENSG00000185739	tier1	-	-	76	0	0.00	34	13	27.66
SSR1	0	genome.wustl.edu	37	6	7288157	7288158	+	Splice_Site	INS	-	-	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	7288157	7288158	-	A	INS	SSR1	ENST00000475213	human	ensembl	74_37	-1	known	splice_site_ins	c.NULL	NULL	0.292:0.226	-	-	-	no_errors	SSR1	HGNC	ENSG00000124783	tier1			22	0	0.00	27	3	10.00
ST6GAL2	0	genome.wustl.edu	37	2	107459702	107459702	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	2	107459702	107459702	G	A	SNP	ST6GAL2	ENST00000361686	human	ensembl	74_37	-1	known	silent	c.732	p.A244	0.000	NULL	pfam_Glyco_trans_29,superfamily_Glyco_hydro/deAcase_b/a-brl	-	no_errors	ST6GAL2	HGNC	ENSG00000144057				33	0	0.00	18	3	14.29
STAP2	0	genome.wustl.edu	37	19	4333712	4333712	+	Silent	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	4333712	4333712	C	A	SNP	STAP2	ENST00000600324	human	ensembl	74_37	-1	known	silent	c.276	p.R92	0.000	NULL	pfscan_SH2	-	no_errors	STAP2	HGNC	ENSG00000178078				66	0	0.00	35	2	5.41
STK33	0	genome.wustl.edu	37	11	8494768	8494768	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	8494768	8494768	C	T	SNP	STK33	ENST00000315204	human	ensembl	74_37	-1	known	missense	c.281	p.G94D	0.007	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK33	HGNC	ENSG00000130413				77	0	0.00	45	3	6.12
SYMPK	0	genome.wustl.edu	37	19	46330851	46330851	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	46330851	46330851	G	A	SNP	SYMPK	ENST00000245934	human	ensembl	74_37	-1	known	nonsense	c.2098	p.R700*	0.961	superfamily_ARM-type_fold	pfam_DUF3453,pfam_Symplekin_C,superfamily_ARM-type_fold	-	no_errors	SYMPK	HGNC	ENSG00000125755	tier1	-	-	88	0	0.00	55	25	31.25
SYNE1	0	genome.wustl.edu	37	6	152644758	152644758	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	152644758	152644758	C	T	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.15772	p.V5258I	0.000	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	39	0	0.00	10	17	62.96
SYNGR1	0	genome.wustl.edu	37	22	39760253	39760253	+	Silent	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	22	39760253	39760253	C	T	SNP	SYNGR1	ENST00000381535	human	ensembl	74_37	+1	known	silent	c.54	p.S18	0.069	NULL	pfam_Marvel	-	no_errors	SYNGR1	HGNC	ENSG00000100321	tier1	rs151233936	-	78	0	0.00	71	4	5.33
SYT9	0	genome.wustl.edu	37	11	7334873	7334873	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	7334873	7334873	G	A	SNP	SYT9	ENST00000318881	human	ensembl	74_37	+1	known	missense	c.745	p.A249T	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT9	HGNC	ENSG00000170743				53	0	0.00	32	3	8.57
TAF5L	0	genome.wustl.edu	37	1	229730322	229730322	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	229730322	229730322	C	T	SNP	TAF5L	ENST00000258281	human	ensembl	74_37	-1	known	missense	c.1492	p.A498T	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_TFIID-su_WD40-assoc_reg,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_G-protein_beta_WD-40_rep,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TAF5L	HGNC	ENSG00000135801	tier1	-	-	65	0	0.00	66	5	7.04
TBP	0	genome.wustl.edu	37	6	170871043	170871043	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	6	170871043	170871043	G	A	SNP	TBP	ENST00000230354	human	ensembl	74_37	+1	known	silent	c.219	p.Q73	0.964	NULL	pfam_TBP,prints_TBP	-	no_errors	TBP	HGNC	ENSG00000112592	tier1	-	-	80	0	0.00	57	4	6.56
TFAP4	0	genome.wustl.edu	37	16	4311926	4311926	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	16	4311926	4311926	G	A	SNP	TFAP4	ENST00000204517	human	ensembl	74_37	-1	known	nonsense	c.379	p.R127*	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TFAP4	HGNC	ENSG00000090447	tier1	-	-	69	0	0.00	35	17	32.08
THSD4	0	genome.wustl.edu	37	15	71535400	71535400	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	15	71535400	71535400	G	T	SNP	THSD4	ENST00000261862	human	ensembl	74_37	+1	known	missense	c.877	p.G293W	0.998	pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD4	HGNC	ENSG00000187720	tier1	-	-	59	0	0.00	50	4	7.41
TLR10	0	genome.wustl.edu	37	4	38774956	38774956	+	Silent	SNP	T	T	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	4	38774956	38774956	T	C	SNP	TLR10	ENST00000308973	human	ensembl	74_37	-1	known	silent	c.2256	p.K752	0.718	pirsf_Toll-like_receptor,pfam_TIR_dom,superfamily_TIR_dom,smart_TIR_dom,pfscan_TIR_dom	pirsf_Toll-like_receptor,pfam_TIR_dom,pfam_Leu-rich_rpt,superfamily_TIR_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_TIR_dom,pfscan_TIR_dom	-	no_errors	TLR10	HGNC	ENSG00000174123	tier1	-	-	121	0	0.00	60	4	6.25
TNKS1BP1	0	genome.wustl.edu	37	11	57068026	57068026	+	Silent	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	11	57068026	57068026	C	T	SNP	TNKS1BP1	ENST00000358252	human	ensembl	74_37	-1	known	silent	c.5178	p.K1726	1.000	NULL	NULL	-	no_errors	TNKS1BP1	HGNC	ENSG00000149115	tier1	-	-	51	0	0.00	2	15	88.24
TOE1	0	genome.wustl.edu	37	1	45807158	45807158	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	45807158	45807158	C	T	SNP	TOE1	ENST00000372090	human	ensembl	74_37	+1	known	missense	c.250	p.R84C	1.000	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	pfam_RNase_CAF1,pfam_Znf_CCCH,superfamily_RNaseH-like_dom	-	no_errors	TOE1	HGNC	ENSG00000132773				27	0	0.00	15	6	28.57
TP53	0	genome.wustl.edu	37	17	7578190	7578190	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	17	7578190	7578190	T	C	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.659	p.Y220C	0.998	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	77	0	0.00	13	30	69.77
TPSG1	0	genome.wustl.edu	37	16	1272838	1272838	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	16	1272838	1272838	G	T	SNP	TPSG1	ENST00000234798	human	ensembl	74_37	-1	known	missense	c.325	p.Q109K	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TPSG1	HGNC	ENSG00000116176	tier1	-	-	113	0	0.00	36	69	65.71
TSEN2	0	genome.wustl.edu	37	3	12544842	12544842	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	3	12544842	12544842	G	T	SNP	TSEN2	ENST00000284995	human	ensembl	74_37	+1	known	missense	c.390	p.K130N	0.199	pirsf_tRNA_splic_SEN2	pfam_tRNA_intron_Endonuc_cat-like,pfam_tRNA_intron_Endonuc_N,superfamily_tRNA_intron_Endonuc_cat-like,pirsf_tRNA_splic_SEN2	-	no_errors	TSEN2	HGNC	ENSG00000154743	tier1	-	-	61	0	0.00	56	4	6.67
TSPAN2	0	genome.wustl.edu	37	1	115604801	115604801	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	115604801	115604801	G	A	SNP	TSPAN2	ENST00000369516	human	ensembl	74_37	-1	known	silent	c.225	p.F75	0.951	pfam_Tetraspanin/Peripherin,prints_Tetraspanin	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN2	HGNC	ENSG00000134198	tier1	-	-	217	0	0.00	68	33	32.67
TTN	0	genome.wustl.edu	37	2	179434879	179434879	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	2	179434879	179434879	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.68276	p.R22759K	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	40	0	0.00	17	13	43.33
TTN	0	genome.wustl.edu	37	2	179593369	179593369	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	2	179593369	179593369	A	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.15552	p.S5184R	0.993	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				51	0	0.00	48	4	7.69
TULP2	0	genome.wustl.edu	37	19	49388731	49388731	+	Silent	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	49388731	49388731	G	A	SNP	TULP2	ENST00000221399	human	ensembl	74_37	-1	known	silent	c.1035	p.D345	0.983	pfam_Tubby_C,superfamily_Tubby_C-like,prints_Tubby_C	pfam_Tubby_C,superfamily_Tubby_C-like,prints_Tubby_C,prints_Tubby_N	-	no_errors	TULP2	HGNC	ENSG00000104804	tier1	-	-	84	0	0.00	45	11	19.64
UFSP2	0	genome.wustl.edu	37	4	186329540	186329540	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	4	186329540	186329540	C	T	SNP	UFSP2	ENST00000264689	human	ensembl	74_37	-1	known	missense	c.881	p.R294H	0.890	pfam_Peptidase_C78_UfSP1/2	pfam_Peptidase_C78_UfSP1/2	-	no_errors	UFSP2	HGNC	ENSG00000109775	tier1	-	-	42	0	0.00	25	9	26.47
UNC13C	0	genome.wustl.edu	37	15	54556406	54556406	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	15	54556406	54556406	G	T	SNP	UNC13C	ENST00000260323	human	ensembl	74_37	+1	known	missense	c.3489	p.K1163N	1.000	NULL	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13C	HGNC	ENSG00000137766	tier1	-	-	64	0	0.00	52	4	7.14
USH2A	0	genome.wustl.edu	37	1	216256830	216256830	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	216256830	216256830	C	T	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.5266	p.V1756I	0.472	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Laminin_G,pfscan_Laminin_G	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	rs143208990	-	134	0	0.00	125	37	22.84
USP12	0	genome.wustl.edu	37	13	27645219	27645219	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	13	27645219	27645219	C	T	SNP	USP12	ENST00000282344	human	ensembl	74_37	-1	known	missense	c.1000	p.D334N	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP12	HGNC	ENSG00000152484	tier1	-	-	76	0	0.00	51	36	41.38
VDAC1	0	genome.wustl.edu	37	5	133326757	133326757	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	5	133326757	133326757	A	G	SNP	VDAC1	ENST00000265333	human	ensembl	74_37	-1	known	missense	c.206	p.L69P	1.000	pfam_Porin_Euk/Tom40,prints_Porin_Euk	pfam_Porin_Euk/Tom40,prints_Porin_Euk	-	no_errors	VDAC1	HGNC	ENSG00000213585	tier1	-	-	101	0	0.00	57	38	40.00
VPS13D	0	genome.wustl.edu	37	1	12351120	12351120	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	12351120	12351120	G	C	SNP	VPS13D	ENST00000358136	human	ensembl	74_37	+1	known	missense	c.5791	p.E1931Q	1.000	NULL	pfam_VPSAP_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	VPS13D	HGNC	ENSG00000048707	tier1	-	-	26	0	0.00	8	6	42.86
WDFY1	0	genome.wustl.edu	37	2	224746742	224746742	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	2	224746742	224746742	G	C	SNP	WDFY1	ENST00000233055	human	ensembl	74_37	-1	known	missense	c.981	p.S327R	1.000	pfam_Znf_FYVE,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	pfam_WD40_repeat,pfam_Znf_FYVE,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,smart_WD40_repeat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDFY1	HGNC	ENSG00000085449	tier1	-	-	47	0	0.00	25	24	48.98
ZC3H10	0	genome.wustl.edu	37	12	56512094	56512094	+	RNA	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	12	56512094	56512094	C	T	SNP	ZC3H10	ENST00000549973	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZC3H10	HGNC	ENSG00000135482	tier1	-	-	42	0	0.00	11	26	68.42
ZC3H13	0	genome.wustl.edu	37	13	46559748	46559748	+	Silent	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	13	46559748	46559748	C	T	SNP	ZC3H13	ENST00000242848	human	ensembl	74_37	-1	known	silent	c.1404	p.R468	1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H13	HGNC	ENSG00000123200	tier1	-	-	38	0	0.00	33	17	33.33
ZMAT4	0	genome.wustl.edu	37	8	40438734	40438734	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	8	40438734	40438734	G	T	SNP	ZMAT4	ENST00000297737	human	ensembl	74_37	-1	known	missense	c.624	p.N208K	1.000	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like	-	no_errors	ZMAT4	HGNC	ENSG00000165061	tier1	-	-	84	0	0.00	10	41	80.39
ZNF281	0	genome.wustl.edu	37	1	200377974	200377974	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	200377974	200377974	C	A	SNP	ZNF281	ENST00000294740	human	ensembl	74_37	-1	known	missense	c.860	p.R287I	0.996	pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF281	HGNC	ENSG00000162702	tier1	-	-	66	0	0.00	30	28	48.28
ZNF417	0	genome.wustl.edu	37	19	58420048	58420048	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	58420048	58420048	G	A	SNP	ZNF417	ENST00000312026	human	ensembl	74_37	-1	known	missense	c.1598	p.S533F	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF417	HGNC	ENSG00000173480	tier1	-	-	135	0	0.00	90	9	9.09
ZNF562	0	genome.wustl.edu	37	19	9763683	9763683	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	19	9763683	9763683	G	C	SNP	ZNF562	ENST00000448622	human	ensembl	74_37	-1	known	missense	c.1223	p.T408S	0.081	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF562	HGNC	ENSG00000171466	tier1	-	-	101	0	0.00	18	28	60.87
ZNF672	0	genome.wustl.edu	37	1	249142293	249142293	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	1	249142293	249142293	C	T	SNP	ZNF672	ENST00000306562	human	ensembl	74_37	+1	known	missense	c.820	p.R274W	0.337	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF672	HGNC	ENSG00000171161	tier1	-	-	17	0	0.00	19	10	34.48
ZWILCH	0	genome.wustl.edu	37	15	66806415	66806415	+	Silent	SNP	A	A	G			TCGA-L5-A88V-01A-11D-A351-09	TCGA-L5-A88V-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	27a60b64-f5ce-45e1-981c-70cf419c8382	ff7c4baf-0683-4fa1-adf5-0afeb27decd2	15	66806415	66806415	A	G	SNP	ZWILCH	ENST00000307897	human	ensembl	74_37	+1	known	silent	c.195	p.E65	0.998	pfam_RZZ-complex_zwilch	pfam_RZZ-complex_zwilch	-	no_errors	ZWILCH	HGNC	ENSG00000174442				58	0	0.00	52	3	5.45
