Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA10	0	genome.wustl.edu	37	17	67160217	67160217	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	17	67160217	67160217	T	C	SNP	ABCA10	ENST00000269081	human	ensembl	74_37	-1	known	missense	c.3361	p.I1121V	0.994	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA10	HGNC	ENSG00000154263	tier1	-	-	65	0	0.00	37	12	24.49
ADAM7	0	genome.wustl.edu	37	8	24298629	24298629	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	8	24298629	24298629	C	A	SNP	ADAM7	ENST00000175238	human	ensembl	74_37	+1	known	missense	c.8	p.P3H	0.000	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM7	HGNC	ENSG00000069206	tier1	-	-	97	0	0.00	42	19	31.15
ADAM7	0	genome.wustl.edu	37	8	24365023	24365023	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	8	24365023	24365023	G	A	SNP	ADAM7	ENST00000175238	human	ensembl	74_37	+1	known	missense	c.2239	p.A747T	0.000	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM7	HGNC	ENSG00000069206	tier1	-	-	113	0	0.00	63	26	29.21
ADCY7	0	genome.wustl.edu	37	16	50335099	50335099	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	16	50335099	50335099	C	T	SNP	ADCY7	ENST00000254235	human	ensembl	74_37	+1	known	missense	c.1342	p.R448C	0.209	pfam_A/G_cyclase,superfamily_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY7	HGNC	ENSG00000121281	tier1	-	-	216	0	0.00	160	65	28.89
ADI1	0	genome.wustl.edu	37	2	3502816	3502816	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	2	3502816	3502816	G	A	SNP	ADI1	ENST00000327435	human	ensembl	74_37	-1	known	missense	c.458	p.P153L	0.993	pfam_Acireductn_dOase_family,pfam_AraC-bd,superfamily_RmlC_Cupin	pfam_Acireductn_dOase_family,pfam_Cupin_2,pfam_AraC-bd,superfamily_RmlC_Cupin	-	no_errors	ADI1	HGNC	ENSG00000182551	tier1	-	-	93	0	0.00	44	25	36.23
ADIPOQ-AS1	0	genome.wustl.edu	37	3	186572507	186572507	+	RNA	SNP	A	A	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	186572507	186572507	A	T	SNP	ADIPOQ-AS1	ENST00000422718	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ADIPOQ-AS1	HGNC	ENSG00000226482	tier1	-	-	71	0	0.00	26	10	27.78
ADRA2C	0	genome.wustl.edu	37	4	3769693	3769693	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	4	3769693	3769693	C	T	SNP	ADRA2C	ENST00000330055	human	ensembl	74_37	+1	known	nonsense	c.1360	p.R454*	0.997	prints_ADRA2C_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRA2C_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam	-	no_errors	ADRA2C	HGNC	ENSG00000184160	tier1	-	-	66	0	0.00	60	19	24.05
AGO1	0	genome.wustl.edu	37	1	36379442	36379442	+	Splice_Site	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	36379442	36379442	G	A	SNP	AGO1	ENST00000373204	human	ensembl	74_37	+1	known	splice_site	c.1583-1	e13-1	1.000	-	-	-	no_errors	AGO1	HGNC	ENSG00000092847	tier1	-	-	61	0	0.00	46	18	27.69
AKR1E2	0	genome.wustl.edu	37	10	4882000	4882000	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	10	4882000	4882000	G	A	SNP	AKR1E2	ENST00000298375	human	ensembl	74_37	+1	known	missense	c.662	p.R221H	1.000	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1E2	HGNC	ENSG00000165568	tier1	-	-	57	0	0.00	49	4	7.55
ALDH8A1	0	genome.wustl.edu	37	6	135254110	135254110	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	6	135254110	135254110	A	G	SNP	ALDH8A1	ENST00000265605	human	ensembl	74_37	-1	known	missense	c.653	p.L218P	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH8A1	HGNC	ENSG00000118514	tier1	-	-	46	0	0.00	41	4	8.89
ALS2	0	genome.wustl.edu	37	2	202626143	202626143	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	2	202626143	202626143	G	T	SNP	ALS2	ENST00000264276	human	ensembl	74_37	-1	known	missense	c.574	p.P192T	1.000	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,pfam_MORN,pfam_VPS9,pfam_DH-domain,superfamily_RCC1/BLIP-II,superfamily_DH-domain,smart_MORN,pfscan_VPS9,pfscan_Reg_chr_condens,pfscan_DH-domain,prints_Reg_chr_condens	-	no_errors	ALS2	HGNC	ENSG00000003393	tier1	-	-	67	0	0.00	64	4	5.80
AMT	0	genome.wustl.edu	37	3	49457771	49457771	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	49457771	49457771	G	A	SNP	AMT	ENST00000273588	human	ensembl	74_37	-1	known	missense	c.344	p.T115I	1.000	pfam_GCV_T_N,pirsf_GcvT,tigrfam_GcvT	pfam_GCV_T_N,pfam_GCV_T_C,pirsf_GcvT,tigrfam_GcvT	-	no_errors	AMT	HGNC	ENSG00000145020	tier1	-	-	63	0	0.00	45	30	40.00
AMY1C	0	genome.wustl.edu	37	1	104297202	104297202	+	Silent	SNP	T	T	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	104297202	104297202	T	C	SNP	AMY1C	ENST00000370079	human	ensembl	74_37	+1	known	silent	c.960	p.H320	1.000	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY1C	HGNC	ENSG00000187733	tier1	-	-	317	0	0.00	226	46	16.91
ANO4	0	genome.wustl.edu	37	12	101188629	101188629	+	RNA	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	12	101188629	101188629	A	G	SNP	ANO4	ENST00000551148	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.999	-	-	-	no_errors	ANO4	HGNC	ENSG00000151572	tier1	-	-	13	0	0.00	8	5	38.46
ARHGAP33	0	genome.wustl.edu	37	19	36279303	36279303	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	36279303	36279303	C	T	SNP	ARHGAP33	ENST00000007510	human	ensembl	74_37	+1	known	missense	c.3836	p.S1279F	0.628	NULL	pfam_RhoGAP_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP33	HGNC	ENSG00000004777	tier1	-	-	53	0	0.00	32	24	42.86
ARHGEF15	0	genome.wustl.edu	37	17	8222159	8222159	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	17	8222159	8222159	C	T	SNP	ARHGEF15	ENST00000361926	human	ensembl	74_37	+1	known	missense	c.1964	p.S655L	0.970	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF15	HGNC	ENSG00000198844	tier1	-	-	30	0	0.00	15	6	28.57
ASIC4	0	genome.wustl.edu	37	2	220396564	220396564	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	2	220396564	220396564	G	T	SNP	ASIC4	ENST00000347842	human	ensembl	74_37	+1	known	missense	c.1048	p.G350C	1.000	pfam_Na+channel_ASC,prints_Na+channel_ASC	pfam_Na+channel_ASC,prints_Na+channel_ASC	-	no_errors	ASIC4	HGNC	ENSG00000072182				67	0	0.00	38	2	5.00
ATAD2	0	genome.wustl.edu	37	8	124335278	124335279	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	8	124335278	124335279	-	T	INS	ATAD2	ENST00000287394	human	ensembl	74_37	-1	known	frame_shift_ins	c.4031_4030	p.S1344fs	0.997:1.000	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2	HGNC	ENSG00000156802	tier1			80	0	0.00	58	24	29.27
ATP2C1	0	genome.wustl.edu	37	3	130716512	130716512	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	130716512	130716512	G	A	SNP	ATP2C1	ENST00000393221	human	ensembl	74_37	+1	known	missense	c.2408	p.S803N	1.000	pfam_ATPase_P-typ_cation-transptr_C,tigrfam_ATPase_P-typ_Ca-transp_PMR1	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_PMR1,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2C1	HGNC	ENSG00000017260	tier1	-	-	73	0	0.00	64	4	5.88
AZI2	0	genome.wustl.edu	37	3	28365409	28365409	+	RNA	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	28365409	28365409	A	G	SNP	AZI2	ENST00000295748	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.391	-	-	-	no_errors	AZI2	HGNC	ENSG00000163512	tier1	-	-	10	0	0.00	6	6	50.00
BCL9L	0	genome.wustl.edu	37	11	118773129	118773129	+	Silent	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	118773129	118773129	C	T	SNP	BCL9L	ENST00000334801	human	ensembl	74_37	-1	known	silent	c.1323	p.G441	0.169	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9L	HGNC	ENSG00000186174	tier1	-	-	13	0	0.00	9	5	35.71
BMP1	0	genome.wustl.edu	37	8	22035217	22035217	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	8	22035217	22035217	C	A	SNP	BMP1	ENST00000354870	human	ensembl	74_37	+1	known	missense	c.868	p.L290I	0.742	NULL	pfam_Peptidase_M12A,smart_Peptidase_Metallo,prints_Peptidase_M12A	-	no_errors	BMP1	HGNC	ENSG00000168487	tier1	-	-	61	0	0.00	40	14	25.93
BRD3	0	genome.wustl.edu	37	9	136913402	136913402	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	9	136913402	136913402	C	T	SNP	BRD3	ENST00000303407	human	ensembl	74_37	-1	known	missense	c.889	p.E297K	1.000	superfamily_Bromodomain	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	BRD3	HGNC	ENSG00000169925	tier1	-	-	29	0	0.00	13	9	40.91
C11orf74	0	genome.wustl.edu	37	11	36669570	36669570	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	36669570	36669570	G	T	SNP	C11orf74	ENST00000334307	human	ensembl	74_37	+1	known	missense	c.363	p.L121F	0.934	NULL	NULL	-	no_errors	C11orf74	HGNC	ENSG00000166352	tier1	-	-	95	0	0.00	74	29	28.16
C17orf85	0	genome.wustl.edu	37	17	3743435	3743435	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	17	3743435	3743435	G	T	SNP	C17orf85	ENST00000389005	human	ensembl	74_37	-1	known	missense	c.314	p.A105D	1.000	NULL	pfam_DUF2414	-	no_errors	C17orf85	HGNC	ENSG00000074356	tier1	-	-	88	0	0.00	66	4	5.71
C19orf55	0	genome.wustl.edu	37	19	36253035	36253035	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	36253035	36253035	C	G	SNP	C19orf55	ENST00000396908	human	ensembl	74_37	+1	known	missense	c.427	p.Q143E	0.007	NULL	NULL	-	no_errors	C19orf55	HGNC	ENSG00000167595	tier1	-	-	105	0	0.00	38	37	49.33
C9orf78	0	genome.wustl.edu	37	9	132596001	132596001	+	RNA	DEL	A	A	-			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	9	132596001	132596001	A	-	DEL	C9orf78	ENST00000461762	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.115	-	-	-	no_errors	C9orf78	HGNC	ENSG00000136819	tier1			36	0	0.00	19	3	13.64
CAPN5	0	genome.wustl.edu	37	11	76804733	76804733	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	76804733	76804733	C	G	SNP	CAPN5	ENST00000278559	human	ensembl	74_37	+1	known	missense	c.171	p.I57M	1.000	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,pfam_C2_dom,superfamily_Calpain_domain_III,superfamily_C2_dom,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_C2_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN5	HGNC	ENSG00000149260	tier1	-	-	53	0	0.00	24	17	41.46
CASC5	0	genome.wustl.edu	37	15	40911203	40911203	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	15	40911203	40911203	G	T	SNP	CASC5	ENST00000346991	human	ensembl	74_37	+1	known	missense	c.447	p.Q149H	1.000	NULL	NULL	-	no_errors	CASC5	HGNC	ENSG00000137812	tier1	-	-	86	0	0.00	60	4	6.25
CAV2	0	genome.wustl.edu	37	7	116139910	116139910	+	Silent	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	7	116139910	116139910	C	G	SNP	CAV2	ENST00000222693	human	ensembl	74_37	+1	known	silent	c.75	p.L25	0.003	pfam_Caveolin	pfam_Caveolin	-	no_errors	CAV2	HGNC	ENSG00000105971	tier1	-	-	122	0	0.00	89	46	34.07
CCDC106	0	genome.wustl.edu	37	19	56162854	56162854	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	56162854	56162854	G	T	SNP	CCDC106	ENST00000308964	human	ensembl	74_37	+1	known	missense	c.519	p.R173S	1.000	NULL	NULL	-	no_errors	CCDC106	HGNC	ENSG00000173581	tier1	-	-	30	0	0.00	19	8	29.63
CCDC136	0	genome.wustl.edu	37	7	128454861	128454861	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	7	128454861	128454861	C	G	SNP	CCDC136	ENST00000297788	human	ensembl	74_37	+1	known	missense	c.2933	p.A978G	0.000	NULL	NULL	-	no_errors	CCDC136	HGNC	ENSG00000128596	tier1	-	-	77	0	0.00	58	16	21.62
CCIN	0	genome.wustl.edu	37	9	36170954	36170954	+	Silent	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	9	36170954	36170954	G	A	SNP	CCIN	ENST00000335119	human	ensembl	74_37	+1	known	silent	c.1455	p.R485	1.000	NULL	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	CCIN	HGNC	ENSG00000185972				35	0	0.00	31	3	8.82
CD101	0	genome.wustl.edu	37	1	117568494	117568494	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	117568494	117568494	C	T	SNP	CD101	ENST00000256652	human	ensembl	74_37	+1	known	missense	c.2792	p.S931L	0.955	smart_Ig_sub	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	CD101	HGNC	ENSG00000134256				30	0	0.00	23	8	25.81
CD59	0	genome.wustl.edu	37	11	33743972	33743972	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	33743972	33743972	G	T	SNP	CD59	ENST00000351554	human	ensembl	74_37	-1	known	missense	c.20	p.S7Y	0.000	NULL	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	-	no_errors	CD59	HGNC	ENSG00000085063	tier1	-	-	65	0	0.00	68	4	5.56
CDHR3	0	genome.wustl.edu	37	7	105664924	105664924	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	7	105664924	105664924	G	T	SNP	CDHR3	ENST00000317716	human	ensembl	74_37	+1	known	missense	c.2174	p.G725V	0.997	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDHR3	HGNC	ENSG00000128536	tier1	-	-	87	0	0.00	57	4	6.56
CELA2A	0	genome.wustl.edu	37	1	15788089	15788089	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	15788089	15788089	T	C	SNP	CELA2A	ENST00000359621	human	ensembl	74_37	+1	known	missense	c.163	p.Y55H	0.005	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CELA2A	HGNC	ENSG00000142615	tier1	-	-	107	0	0.00	52	34	39.53
CEP70	0	genome.wustl.edu	37	3	138224144	138224144	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	138224144	138224144	G	A	SNP	CEP70	ENST00000264982	human	ensembl	74_37	-1	known	missense	c.1214	p.S405F	0.785	NULL	pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CEP70	HGNC	ENSG00000114107	tier1	-	-	159	0	0.00	82	39	32.23
CHD7	0	genome.wustl.edu	37	8	61750713	61750713	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	8	61750713	61750713	G	A	SNP	CHD7	ENST00000423902	human	ensembl	74_37	+1	known	missense	c.4432	p.E1478K	1.000	superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD7	HGNC	ENSG00000171316	tier1	-	-	113	0	0.00	74	32	30.19
CHN2	0	genome.wustl.edu	37	7	29440273	29440273	+	Silent	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	7	29440273	29440273	C	T	SNP	CHN2	ENST00000539406	human	ensembl	74_37	+1	known	silent	c.630	p.Y210	1.000	smart_SH2	pfam_RhoGAP_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SH2,superfamily_Rho_GTPase_activation_prot,smart_SH2,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_SH2,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_DAG/PE-bd	-	no_errors	CHN2	HGNC	ENSG00000106069	tier1	-	-	37	0	0.00	40	11	21.57
CKAP5	0	genome.wustl.edu	37	11	46780957	46780957	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	46780957	46780957	G	A	SNP	CKAP5	ENST00000415402	human	ensembl	74_37	-1	known	missense	c.4430	p.A1477V	1.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,superfamily_Homing_endonucl,pfscan_HEAT_type_2	-	no_errors	CKAP5	HGNC	ENSG00000175216				52	0	0.00	54	3	5.26
COL11A1	0	genome.wustl.edu	37	1	103467522	103467522	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	103467522	103467522	G	A	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	missense	c.2137	p.L713F	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718	tier1	-	-	125	0	0.00	89	36	28.80
COLEC12	0	genome.wustl.edu	37	18	334825	334825	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	18	334825	334825	C	G	SNP	COLEC12	ENST00000400256	human	ensembl	74_37	-1	known	missense	c.1733	p.G578A	1.000	pfam_Collagen	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	COLEC12	HGNC	ENSG00000158270	tier1	-	-	54	0	0.00	32	20	37.74
CUL7	0	genome.wustl.edu	37	6	43005594	43005594	+	Silent	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	6	43005594	43005594	C	T	SNP	CUL7	ENST00000535468	human	ensembl	74_37	-1	known	silent	c.5181	p.V1727	0.835	NULL	pfam_Cullin_N,pfam_CPH_domain,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL7	HGNC	ENSG00000044090				78	0	0.00	52	4	7.14
CYLD	0	genome.wustl.edu	37	16	50818239	50818239	+	Splice_Site	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	16	50818239	50818239	G	T	SNP	CYLD	ENST00000311559	human	ensembl	74_37	+1	known	splice_site	c.1827-1	e10-1	1.000	-	-	-	no_errors	CYLD	HGNC	ENSG00000083799	tier1	-	-	95	0	0.00	90	27	23.08
DDX60	0	genome.wustl.edu	37	4	169197311	169197311	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	4	169197311	169197311	C	A	SNP	DDX60	ENST00000393743	human	ensembl	74_37	-1	known	missense	c.2000	p.S667I	0.083	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX60	HGNC	ENSG00000137628	tier1	-	-	58	0	0.00	35	16	31.37
DSCAM	0	genome.wustl.edu	37	21	41424027	41424027	+	Silent	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	21	41424027	41424027	G	T	SNP	DSCAM	ENST00000400454	human	ensembl	74_37	-1	known	silent	c.5043	p.R1681	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAM	HGNC	ENSG00000171587	tier1	-	-	82	0	0.00	54	23	29.87
DYRK1A	0	genome.wustl.edu	37	21	38865336	38865336	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	21	38865336	38865336	G	C	SNP	DYRK1A	ENST00000398960	human	ensembl	74_37	+1	known	missense	c.969	p.Q323H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK1A	HGNC	ENSG00000157540	tier1	-	-	75	0	0.00	54	29	34.94
ECSIT	0	genome.wustl.edu	37	19	11618777	11618777	+	Silent	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	11618777	11618777	C	T	SNP	ECSIT	ENST00000592312	human	ensembl	74_37	-1	putative	silent	c.477	p.K159	0.002	NULL	pfam_ECSIT	-	no_errors	ECSIT	HGNC	ENSG00000130159	tier1	-	-	52	0	0.00	30	24	44.44
EFR3A	0	genome.wustl.edu	37	8	132991105	132991105	+	Silent	SNP	A	A	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	8	132991105	132991105	A	T	SNP	EFR3A	ENST00000254624	human	ensembl	74_37	+1	known	silent	c.1338	p.G446	0.990	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	EFR3A	HGNC	ENSG00000132294	tier1	-	-	67	0	0.00	48	23	32.39
EIF2D	0	genome.wustl.edu	37	1	206776495	206776495	+	Silent	SNP	G	G	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	206776495	206776495	G	C	SNP	EIF2D	ENST00000271764	human	ensembl	74_37	-1	known	silent	c.594	p.L198	0.001	NULL	pfam_TIF_SUI1,superfamily_TIF_SUI1,superfamily_SWIB_MDM2_domain,superfamily_PUA-like_domain,smart_PUA,pfscan_PUA,pfscan_TIF_SUI1	-	no_errors	EIF2D	HGNC	ENSG00000143486	tier1	-	-	69	0	0.00	50	22	30.56
EIF4G1	0	genome.wustl.edu	37	3	184044684	184044684	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	184044684	184044684	G	T	SNP	EIF4G1	ENST00000352767	human	ensembl	74_37	+1	known	missense	c.3362	p.R1121L	1.000	NULL	pfam_MIF4G-like_typ-3,pfam_Initiation_fac_eIF4g_MI,pfam_W2_domain,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3,smart_Initiation_fac_eIF4g_MI,smart_W2_domain	-	no_errors	EIF4G1	HGNC	ENSG00000114867				87	0	0.00	74	4	5.13
ENSG00000182873	0	genome.wustl.edu	37	1	2113342	2113342	+	RNA	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	2113342	2113342	C	T	SNP	ENSG00000182873	ENST00000333854	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-181G12.2	Clone_based_vega_gene	ENSG00000182873	tier1	-	-	67	0	0.00	64	32	33.33
ENSG00000213777	0	genome.wustl.edu	37	19	54007225	54007225	+	RNA	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	54007225	54007225	C	T	SNP	ENSG00000213777	ENST00000597004	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.844	-	-	-	no_errors	CTD-2224J9.8	Clone_based_vega_gene	ENSG00000213777	tier1	-	-	8	0	0.00	5	5	50.00
ENSG00000232274	0	genome.wustl.edu	37	1	143189125	143189125	+	RNA	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	143189125	143189125	G	A	SNP	ENSG00000232274	ENST00000447389	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	RP11-782C8.2	Clone_based_vega_gene	ENSG00000232274	tier1	rs201126579	-	20	0	0.00	17	5	22.73
ENSG00000233145	0	genome.wustl.edu	37	X	139100021	139100021	+	RNA	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	X	139100021	139100021	G	T	SNP	ENSG00000233145	ENST00000417426	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-364B14.1	Clone_based_vega_gene	ENSG00000233145	tier1	-	-	61	0	0.00	27	21	43.75
ENSG00000261839	0	genome.wustl.edu	37	6	28104687	28104687	+	RNA	SNP	T	T	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	6	28104687	28104687	T	C	SNP	ENSG00000261839	ENST00000565046	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.097	-	-	-	no_errors	RP1-265C24.8	Clone_based_vega_gene	ENSG00000261839	tier1	-	-	237	0	0.00	164	64	27.95
EPHA2	0	genome.wustl.edu	37	1	16459852	16459852	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	16459852	16459852	C	A	SNP	EPHA2	ENST00000358432	human	ensembl	74_37	-1	known	nonsense	c.1876	p.E626*	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA2	HGNC	ENSG00000142627	tier1	-	-	43	0	0.00	24	11	31.43
EPHB6	0	genome.wustl.edu	37	7	142564262	142564262	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	7	142564262	142564262	C	A	SNP	EPHB6	ENST00000392957	human	ensembl	74_37	+1	known	missense	c.1486	p.Q496K	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB6	HGNC	ENSG00000106123				32	0	0.00	29	2	6.45
ERCC4	0	genome.wustl.edu	37	16	14024574	14024574	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	16	14024574	14024574	G	T	SNP	ERCC4	ENST00000311895	human	ensembl	74_37	+1	known	missense	c.800	p.R267L	1.000	tigrfam_Rad1	pfam_ERCC4_domain,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_ERCC4_domain,tigrfam_Rad1	-	no_errors	ERCC4	HGNC	ENSG00000175595	tier1	rs143479220	-	76	0	0.00	54	4	6.90
ETFB	0	genome.wustl.edu	37	19	51857574	51857574	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	51857574	51857574	G	A	SNP	ETFB	ENST00000354232	human	ensembl	74_37	-1	known	missense	c.319	p.P107S	0.000	NULL	pfam_ETF_a/b_N,smart_ETF_a/b_N	-	no_errors	ETFB	HGNC	ENSG00000105379	tier1	-	-	45	0	0.00	35	13	27.08
EXOC1	0	genome.wustl.edu	37	4	56762915	56762915	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	4	56762915	56762915	G	T	SNP	EXOC1	ENST00000346134	human	ensembl	74_37	+1	known	missense	c.1986	p.K662N	1.000	pfam_Exocyst_Exoc1/SEC3	pfam_Exocyst_Exoc1/SEC3	-	no_errors	EXOC1	HGNC	ENSG00000090989				65	0	0.00	44	4	8.33
FAM175B	0	genome.wustl.edu	37	10	126523241	126523241	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	10	126523241	126523241	G	T	SNP	FAM175B	ENST00000298492	human	ensembl	74_37	+1	known	nonsense	c.949	p.E317*	1.000	NULL	prints_FAM175_BRISC_cplx_Abro1_su,prints_FAM175	-	no_errors	FAM175B	HGNC	ENSG00000165660				73	0	0.00	45	3	6.25
FAM92A1P2	0	genome.wustl.edu	37	4	183960276	183960276	+	RNA	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	4	183960276	183960276	C	T	SNP	FAM92A1P2	ENST00000502308	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.279	-	-	-	no_errors	FAM92A1P2	HGNC	ENSG00000230219	tier1	-	-	51	0	0.00	46	20	29.85
FAT3	0	genome.wustl.edu	37	11	92532140	92532140	+	Silent	SNP	T	T	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	92532140	92532140	T	C	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	silent	c.5961	p.Y1987	0.963	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	95	0	0.00	43	23	34.85
FAT3	0	genome.wustl.edu	37	11	92532150	92532150	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	92532150	92532150	A	G	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.5971	p.I1991V	0.998	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	97	0	0.00	43	17	28.33
FBXO3	0	genome.wustl.edu	37	11	33763561	33763561	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	33763561	33763561	C	G	SNP	FBXO3	ENST00000265651	human	ensembl	74_37	-1	known	missense	c.1309	p.D437H	0.949	NULL	pfam_ApaG_domain,pfam_F-box_dom,superfamily_ApaG_domain,superfamily_F-box_dom,smart_F-box_dom,smart_SMI1/KNR4_like_dom,pfscan_ApaG_domain,pfscan_F-box_dom	-	no_errors	FBXO3	HGNC	ENSG00000110429	tier1	-	-	35	0	0.00	17	11	39.29
FER1L4	0	genome.wustl.edu	37	20	34192495	34192495	+	RNA	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	20	34192495	34192495	C	A	SNP	FER1L4	ENST00000426117	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.815	-	-	-	no_errors	FER1L4	HGNC	ENSG00000088340	tier1	-	-	60	0	0.00	38	16	29.63
FLNC	0	genome.wustl.edu	37	7	128486431	128486431	+	Silent	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	7	128486431	128486431	C	T	SNP	FLNC	ENST00000325888	human	ensembl	74_37	+1	known	silent	c.4041	p.G1347	1.000	superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591	tier1	-	-	36	0	0.00	44	14	24.14
FN3K	0	genome.wustl.edu	37	17	80706816	80706816	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	17	80706816	80706816	C	T	SNP	FN3K	ENST00000300784	human	ensembl	74_37	+1	known	missense	c.554	p.A185V	1.000	pfam_Fructo-/Ketosamine-3-kinase,pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom,pirsf_Fructo-/Ketosamine-3-kinase	pfam_Fructo-/Ketosamine-3-kinase,pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom,pirsf_Fructo-/Ketosamine-3-kinase	-	no_errors	FN3K	HGNC	ENSG00000167363	tier1	-	-	53	0	0.00	64	4	5.88
FOXC1	0	genome.wustl.edu	37	6	1612017	1612018	+	In_Frame_Ins	INS	-	-	CGG			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	6	1612017	1612018	-	CGG	INS	FOXC1	ENST00000380874	human	ensembl	74_37	+1	known	in_frame_ins	c.1337_1338	p.450in_frame_insG	1.000:1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXC1	HGNC	ENSG00000054598	tier1			13	0	0.00	9	5	35.71
FREM2	0	genome.wustl.edu	37	13	39261662	39261662	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	13	39261662	39261662	G	A	SNP	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	missense	c.181	p.A61T	0.024	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	tier1	-	-	62	0	0.00	41	15	26.79
GIMAP2	0	genome.wustl.edu	37	7	150389763	150389763	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	7	150389763	150389763	A	C	SNP	GIMAP2	ENST00000223293	human	ensembl	74_37	+1	known	missense	c.389	p.K130T	0.571	pfam_AIG1,superfamily_P-loop_NTPase	pfam_AIG1,superfamily_P-loop_NTPase	-	no_errors	GIMAP2	HGNC	ENSG00000106560	tier1	-	-	59	0	0.00	45	18	28.57
GLI2	0	genome.wustl.edu	37	2	121726451	121726451	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	2	121726451	121726451	G	A	SNP	GLI2	ENST00000361492	human	ensembl	74_37	+1	known	missense	c.805	p.A269T	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI2	HGNC	ENSG00000074047				71	0	0.00	66	4	5.63
GNAS	0	genome.wustl.edu	37	20	57484420	57484420	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	20	57484420	57484420	C	T	SNP	GNAS	ENST00000354359	human	ensembl	74_37	+1	known	missense	c.604	p.R202C	1.000	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460	tier1	rs11554273	-	98	0	0.00	71	26	26.80
GPR179	0	genome.wustl.edu	37	17	36483702	36483702	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	17	36483702	36483702	C	G	SNP	GPR179	ENST00000342292	human	ensembl	74_37	-1	known	missense	c.5750	p.R1917T	0.030	NULL	pfam_GPCR_3_C,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C	-	no_errors	GPR179	HGNC	ENSG00000188888	tier1	-	-	80	0	0.00	46	16	25.81
GPS1	0	genome.wustl.edu	37	17	80011791	80011791	+	Silent	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	17	80011791	80011791	A	G	SNP	GPS1	ENST00000355130	human	ensembl	74_37	+1	known	silent	c.294	p.E98	1.000	NULL	pfam_26S_proteasome_reg_su-Rpn7,pfam_PCI_dom,smart_PCI_dom	-	no_errors	GPS1	HGNC	ENSG00000169727				46	0	0.00	38	3	7.32
GTF2H3	0	genome.wustl.edu	37	12	124144761	124144761	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	12	124144761	124144761	G	T	SNP	GTF2H3	ENST00000543341	human	ensembl	74_37	+1	known	missense	c.906	p.K302N	1.000	NULL	pfam_TFIIH_Tfb4/p34,tigrfam_TFIIH_Tfb4/p34	-	no_errors	GTF2H3	HGNC	ENSG00000111358	tier1	-	-	52	0	0.00	33	17	34.00
HIPK2	0	genome.wustl.edu	37	7	139416253	139416253	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	7	139416253	139416253	G	C	SNP	HIPK2	ENST00000406875	human	ensembl	74_37	-1	known	missense	c.581	p.S194C	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK2	HGNC	ENSG00000064393	tier1	-	-	44	0	0.00	26	18	40.91
HLA-A	0	genome.wustl.edu	37	6	29910684	29910685	+	Frame_Shift_Ins	INS	-	-	GATA			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	6	29910684	29910685	-	GATA	INS	HLA-A	ENST00000376806	human	ensembl	74_37	+1	known	frame_shift_ins	c.224_225	p.E77fs	0.072:0.061	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-A	HGNC	ENSG00000206503	tier1			73	0	0.00	71	8	10.13
HTT	0	genome.wustl.edu	37	4	3208383	3208383	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	4	3208383	3208383	G	A	SNP	HTT	ENST00000355072	human	ensembl	74_37	+1	known	missense	c.5879	p.R1960H	1.000	NULL	pfam_Huntingtin_middle-repeat,pfam_HEAT,superfamily_ARM-type_fold,prints_Huntingtin	-	no_errors	HTT	HGNC	ENSG00000197386	tier1	-	-	38	0	0.00	16	10	38.46
ICOSLG	0	genome.wustl.edu	37	21	45649509	45649509	+	Silent	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	21	45649509	45649509	C	T	SNP	ICOSLG	ENST00000400379	human	ensembl	74_37	-1	putative	silent	c.1326	p.L442	0.000	NULL	pfam_Ig_V-set,pfam_CD80_C2-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	ICOSLG	HGNC	ENSG00000160223	tier1	-	-	29	0	0.00	23	5	17.86
IFT140	0	genome.wustl.edu	37	16	1568310	1568310	+	Silent	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	16	1568310	1568310	G	A	SNP	IFT140	ENST00000426508	human	ensembl	74_37	-1	known	silent	c.4089	p.L1363	0.999	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	IFT140	HGNC	ENSG00000187535	tier1	-	-	43	0	0.00	28	13	31.71
IFT80	0	genome.wustl.edu	37	3	159976308	159976308	+	RNA	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	159976308	159976308	G	A	SNP	IFT80	ENST00000463240	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IFT80	HGNC	ENSG00000068885	tier1	-	-	55	0	0.00	46	20	30.30
IL23R	0	genome.wustl.edu	37	1	67724812	67724812	+	RNA	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	67724812	67724812	A	G	SNP	IL23R	ENST00000473881	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.351	-	-	-	no_errors	IL23R	HGNC	ENSG00000162594	tier1	-	-	50	0	0.00	23	26	53.06
IL27	0	genome.wustl.edu	37	16	28511194	28511194	+	Silent	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	16	28511194	28511194	C	T	SNP	IL27	ENST00000356897	human	ensembl	74_37	-1	known	silent	c.510	p.E170	0.003	superfamily_4_helix_cytokine-like_core	superfamily_4_helix_cytokine-like_core	-	no_errors	IL27	HGNC	ENSG00000197272				41	0	0.00	32	3	8.57
ITFG2	0	genome.wustl.edu	37	12	2939666	2939666	+	RNA	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	12	2939666	2939666	A	G	SNP	ITFG2	ENST00000552005	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ITFG2	HGNC	ENSG00000111203	tier1	-	-	12	0	0.00	6	4	40.00
ITGA11	0	genome.wustl.edu	37	15	68623367	68623367	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	15	68623367	68623367	C	A	SNP	ITGA11	ENST00000315757	human	ensembl	74_37	-1	known	missense	c.1853	p.G618V	1.000	smart_Int_alpha_beta-p,prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA11	HGNC	ENSG00000137809	tier1	-	-	97	0	0.00	58	4	6.45
ITIH2	0	genome.wustl.edu	37	10	7780587	7780587	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	10	7780587	7780587	C	-	DEL	ITIH2	ENST00000358415	human	ensembl	74_37	+1	known	frame_shift_del	c.1961	p.L655fs	0.901	NULL	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH2	HGNC	ENSG00000151655	tier1			75	0	0.00	49	32	39.51
ITK	0	genome.wustl.edu	37	5	156649947	156649947	+	Silent	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	5	156649947	156649947	C	T	SNP	ITK	ENST00000422843	human	ensembl	74_37	+1	known	silent	c.570	p.L190	0.001	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_Znf_Btk_motif,pfam_SH3_domain,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_Znf_Btk_motif,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Znf_Btk_motif,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ITK	HGNC	ENSG00000113263	tier1	-	-	77	0	0.00	45	21	31.82
KANSL1	0	genome.wustl.edu	37	17	44248467	44248467	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	17	44248467	44248467	C	T	SNP	KANSL1	ENST00000262419	human	ensembl	74_37	-1	known	missense	c.1043	p.R348Q	1.000	NULL	NULL	-	no_errors	KANSL1	HGNC	ENSG00000120071	tier1	-	-	82	0	0.00	40	38	48.72
KAT6A	0	genome.wustl.edu	37	8	41792007	41792007	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	8	41792007	41792007	G	A	SNP	KAT6A	ENST00000265713	human	ensembl	74_37	-1	known	missense	c.3731	p.A1244V	0.022	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6A	HGNC	ENSG00000083168				65	0	0.00	69	4	5.48
KBTBD3	0	genome.wustl.edu	37	11	105929763	105929763	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	105929763	105929763	G	C	SNP	KBTBD3	ENST00000526793	human	ensembl	74_37	-1	known	missense	c.62	p.P21R	0.994	pirsf_Kelch-like_gigaxonin	pfam_BACK,pfam_BTB_POZ,pfam_Kelch_1,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KBTBD3	HGNC	ENSG00000182359	tier1	-	-	84	0	0.00	51	21	28.77
KCNAB1	0	genome.wustl.edu	37	3	155861167	155861167	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	155861167	155861167	C	A	SNP	KCNAB1	ENST00000471742	human	ensembl	74_37	+1	known	nonsense	c.200	p.S67*	0.101	NULL	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_K_chnl_volt-dep_bsu_KCNAB-rel,prints_K_chnl_volt-dep_bsu_KCNAB1,prints_K_chnl_volt-dep_bsu_KCNAB3,tigrfam_K_chnl_volt-dep_bsu_KCNAB	-	no_errors	KCNAB1	HGNC	ENSG00000169282				59	0	0.00	35	2	5.41
KIAA0947	0	genome.wustl.edu	37	5	5463973	5463973	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	5	5463973	5463973	G	A	SNP	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	missense	c.4526	p.R1509H	0.307	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151	tier1	-	-	70	0	0.00	50	21	29.58
KIF13B	0	genome.wustl.edu	37	8	28980968	28980968	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	8	28980968	28980968	C	G	SNP	KIF13B	ENST00000524189	human	ensembl	74_37	-1	known	missense	c.3394	p.E1132Q	1.000	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_CAP-Gly_domain,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_CAP-Gly_domain,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_CAP-Gly_domain,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13B	HGNC	ENSG00000197892	tier1	-	-	64	0	0.00	32	13	28.89
KIF15	0	genome.wustl.edu	37	3	44819651	44819651	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	44819651	44819651	C	T	SNP	KIF15	ENST00000438321	human	ensembl	74_37	+1	known	missense	c.248	p.A83V	1.000	NULL	NULL	-	no_errors	KIF15	HGNC	ENSG00000163808	tier1	-	-	77	0	0.00	70	28	28.57
KIF20B	0	genome.wustl.edu	37	10	91528563	91528563	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	10	91528563	91528563	C	A	SNP	KIF20B	ENST00000416354	human	ensembl	74_37	+1	known	missense	c.5250	p.N1750K	0.001	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF20B	HGNC	ENSG00000138182	tier1	-	-	96	0	0.00	68	33	32.67
KLHL29	0	genome.wustl.edu	37	2	23914666	23914666	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	2	23914666	23914666	C	T	SNP	KLHL29	ENST00000486442	human	ensembl	74_37	+1	known	missense	c.1202	p.S401L	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BACK,pfam_Kelch_2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL29	HGNC	ENSG00000119771	tier1	-	-	65	0	0.00	46	26	36.11
KMT2D	0	genome.wustl.edu	37	12	49420423	49420423	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	12	49420423	49420423	C	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.15326	p.C5109F	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Znf_RING	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	32	0	0.00	18	15	45.45
KMT2D	0	genome.wustl.edu	37	12	49441854	49441854	+	Splice_Site	SNP	T	T	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	12	49441854	49441854	T	G	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	splice_site	c.4132-2	e14-2	1.000	-	-	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	64	0	0.00	21	17	44.74
L3MBTL3	0	genome.wustl.edu	37	6	130374096	130374096	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	6	130374096	130374096	C	T	SNP	L3MBTL3	ENST00000361794	human	ensembl	74_37	+1	known	missense	c.542	p.A181V	0.080	NULL	pfam_Mbt,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt,pfscan_SAM	-	no_errors	L3MBTL3	HGNC	ENSG00000198945	tier1	-	-	52	0	0.00	59	4	6.35
LAMA5	0	genome.wustl.edu	37	20	60886979	60886979	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	20	60886979	60886979	G	A	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.9632	p.T3211M	0.002	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	tier1	-	-	208	0	0.00	117	70	36.65
LATS1	0	genome.wustl.edu	37	6	150005070	150005070	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	6	150005070	150005070	G	T	SNP	LATS1	ENST00000253339	human	ensembl	74_37	-1	known	missense	c.1155	p.S385R	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,pfam_UBA/Ts_N,superfamily_Kinase-like_dom,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	LATS1	HGNC	ENSG00000131023				42	0	0.00	32	2	5.88
LDLRAD2	0	genome.wustl.edu	37	1	22148718	22148718	+	RNA	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	22148718	22148718	C	G	SNP	LDLRAD2	ENST00000484271	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LDLRAD2	HGNC	ENSG00000187942	tier1	-	-	142	0	0.00	68	31	31.31
LINC00470	0	genome.wustl.edu	37	18	1278582	1278582	+	RNA	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	18	1278582	1278582	A	G	SNP	LINC00470	ENST00000269201	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.053	-	-	-	no_errors	LINC00470	HGNC	ENSG00000132204	tier1	-	-	73	0	0.00	54	20	27.03
LMAN2	0	genome.wustl.edu	37	5	176761300	176761300	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	5	176761300	176761300	G	A	SNP	LMAN2	ENST00000303127	human	ensembl	74_37	-1	known	missense	c.895	p.L299F	1.000	NULL	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf	-	no_errors	LMAN2	HGNC	ENSG00000169223	tier1	-	-	66	0	0.00	41	28	40.58
LOC100133301	0	genome.wustl.edu	37	1	16865725	16865725	+	Silent	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	16865725	16865725	C	G	SNP	LOC100133301	ENST00000601199	human	ensembl	74_37	+1	known	silent	c.165	p.V55	0.025	NULL	NULL	-	no_errors	AL355149.2	Clone_based_ensembl_gene	ENSG00000268674	tier1	-	-	70	0	0.00	42	19	31.15
LRBA	0	genome.wustl.edu	37	4	151604720	151604720	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	4	151604720	151604720	C	T	SNP	LRBA	ENST00000357115	human	ensembl	74_37	-1	known	nonsense	c.5904	p.W1968*	1.000	pfam_DUF1088	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom	-	no_errors	LRBA	HGNC	ENSG00000198589	tier1	-	-	90	0	0.00	50	23	31.51
LRFN2	0	genome.wustl.edu	37	6	40360338	40360338	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	6	40360338	40360338	C	T	SNP	LRFN2	ENST00000338305	human	ensembl	74_37	-1	known	missense	c.1714	p.V572M	0.998	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN2	HGNC	ENSG00000156564				13	0	0.00	16	2	11.11
LRP2	0	genome.wustl.edu	37	2	170063036	170063036	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	2	170063036	170063036	C	G	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	missense	c.7194	p.L2398F	1.000	NULL	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479	tier1	-	-	82	0	0.00	55	37	40.22
LRP6	0	genome.wustl.edu	37	12	12317346	12317346	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	12	12317346	12317346	C	T	SNP	LRP6	ENST00000261349	human	ensembl	74_37	-1	known	missense	c.1913	p.R638Q	1.000	pirsf_Low_density_Lipo_rcpt-rel_p5/6	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP6	HGNC	ENSG00000070018	tier1	-	-	90	0	0.00	48	9	15.79
LTBP3	0	genome.wustl.edu	37	11	65315164	65315164	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	65315164	65315164	C	T	SNP	LTBP3	ENST00000301873	human	ensembl	74_37	-1	known	missense	c.1975	p.V659M	1.000	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP3	HGNC	ENSG00000168056	tier1	-	-	68	0	0.00	47	31	39.74
MAS1	0	genome.wustl.edu	37	6	160328513	160328513	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	6	160328513	160328513	G	A	SNP	MAS1	ENST00000252660	human	ensembl	74_37	+1	known	missense	c.526	p.E176K	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Proto-oncogene_Mas	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Proto-oncogene_Mas,prints_GPCR_Rhodpsn	-	no_errors	MAS1	HGNC	ENSG00000130368	tier1	-	-	19	0	0.00	17	6	26.09
MBTPS2	0	genome.wustl.edu	37	X	21896680	21896681	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	X	21896680	21896681	-	A	INS	MBTPS2	ENST00000379484	human	ensembl	74_37	+1	known	frame_shift_ins	c.1131_1132	p.S379fs	1.000:0.994	pfam_Peptidase_M50	pfam_Peptidase_M50,superfamily_PDZ,prints_MBTPS2	-	no_errors	MBTPS2	HGNC	ENSG00000012174	tier1			56	0	0.00	22	30	57.69
MGA	0	genome.wustl.edu	37	15	42003256	42003256	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	15	42003256	42003256	T	A	SNP	MGA	ENST00000219905	human	ensembl	74_37	+1	known	missense	c.2793	p.H931Q	0.003	NULL	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197	tier1	-	-	81	0	0.00	46	29	38.67
MGRN1	0	genome.wustl.edu	37	16	4730035	4730035	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	16	4730035	4730035	T	G	SNP	MGRN1	ENST00000262370	human	ensembl	74_37	+1	known	missense	c.1068	p.C356W	1.000	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MGRN1	HGNC	ENSG00000102858	tier1	-	-	164	0	0.00	192	12	5.83
MT-RNR2	0	genome.wustl.edu	37	MT	1729	1729	+	RNA	SNP	T	T	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	MT	1729	1729	T	G	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR2	HGNC	ENSG00000210082	tier1	-	-	43	0	0.00	3	2	40.00
MT-RNR2	0	genome.wustl.edu	37	MT	3042	3042	+	RNA	SNP	T	T	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	MT	3042	3042	T	C	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR2	HGNC	ENSG00000210082	tier1	-	-	257	0	0.00	8	77	90.59
MTMR8	0	genome.wustl.edu	37	X	63569873	63569873	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	X	63569873	63569873	G	T	SNP	MTMR8	ENST00000374852	human	ensembl	74_37	-1	known	missense	c.546	p.F182L	1.000	pfam_Myotubularin-like_Pase_dom	pfam_Myotubularin-like_Pase_dom,smart_Tyr_Pase_cat	-	no_errors	MTMR8	HGNC	ENSG00000102043	tier1	-	-	79	0	0.00	61	4	6.15
MTOR	0	genome.wustl.edu	37	1	11187803	11187803	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	11187803	11187803	C	T	SNP	MTOR	ENST00000361445	human	ensembl	74_37	-1	known	missense	c.6094	p.E2032K	1.000	pfam_Rapamycin-bd_dom,superfamily_Rapamycin-bd_dom	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_DUF3385_TOR,pfam_Rapamycin-bd_dom,pfam_FATC,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,superfamily_Rapamycin-bd_dom,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	MTOR	HGNC	ENSG00000198793	tier1	-	-	54	0	0.00	21	17	44.74
MTUS1	0	genome.wustl.edu	37	8	17542007	17542007	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	8	17542007	17542007	G	T	SNP	MTUS1	ENST00000262102	human	ensembl	74_37	-1	known	missense	c.2668	p.P890T	0.984	NULL	superfamily_Ferritin-like_SF	-	no_errors	MTUS1	HGNC	ENSG00000129422				66	0	0.00	46	3	6.12
MUC4	0	genome.wustl.edu	37	3	195511581	195511581	+	Silent	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	195511581	195511581	A	G	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	silent	c.6870	p.P2290	0.019	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	-	-	245	0	0.00	195	50	20.41
MYT1	0	genome.wustl.edu	37	20	62844938	62844938	+	Silent	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	20	62844938	62844938	G	A	SNP	MYT1	ENST00000536311	human	ensembl	74_37	+1	known	silent	c.1569	p.E523	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1	HGNC	ENSG00000196132	tier1	-	-	65	0	0.00	36	12	25.00
N6AMT2	0	genome.wustl.edu	37	13	21331503	21331503	+	RNA	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	13	21331503	21331503	G	T	SNP	N6AMT2	ENST00000460374	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	N6AMT2	HGNC	ENSG00000150456	tier1	-	-	46	0	0.00	23	10	30.30
NAALADL1	0	genome.wustl.edu	37	11	64815123	64815123	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	64815123	64815123	G	A	SNP	NAALADL1	ENST00000358658	human	ensembl	74_37	-1	known	missense	c.1504	p.P502S	0.986	pfam_Peptidase_M28	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	NAALADL1	HGNC	ENSG00000168060	tier1	-	-	54	0	0.00	40	20	33.33
NARFL	0	genome.wustl.edu	37	16	784156	784156	+	RNA	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	16	784156	784156	C	G	SNP	NARFL	ENST00000562862	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NARFL	HGNC	ENSG00000103245	tier1	-	-	64	0	0.00	34	24	41.38
NBEAL1	0	genome.wustl.edu	37	2	204058577	204058577	+	Silent	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	2	204058577	204058577	C	T	SNP	NBEAL1	ENST00000449802	human	ensembl	74_37	+1	known	silent	c.6894	p.D2298	0.094	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL1	HGNC	ENSG00000144426	tier1	-	-	94	0	0.00	48	28	36.84
NEB	0	genome.wustl.edu	37	2	152436107	152436107	+	Silent	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	2	152436107	152436107	G	A	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	silent	c.16449	p.S5483	0.061	smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091	tier1	-	-	34	0	0.00	23	5	17.86
NFKBIZ	0	genome.wustl.edu	37	3	101575938	101575938	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	101575938	101575938	G	T	SNP	NFKBIZ	ENST00000326172	human	ensembl	74_37	+1	known	missense	c.1846	p.A616S	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	NFKBIZ	HGNC	ENSG00000144802				59	0	0.00	29	2	6.45
NIPBL	0	genome.wustl.edu	37	5	37045679	37045679	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	5	37045679	37045679	G	T	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.6478	p.D2160Y	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190	tier1	rs147054690	-	134	0	0.00	85	5	5.56
NKX2-5	0	genome.wustl.edu	37	5	172661786	172661786	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	5	172661786	172661786	C	T	SNP	NKX2-5	ENST00000329198	human	ensembl	74_37	-1	known	missense	c.301	p.D101N	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-5	HGNC	ENSG00000183072	tier1	-	-	91	0	0.00	63	23	26.74
NLRP4	0	genome.wustl.edu	37	19	56369442	56369442	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	56369442	56369442	T	G	SNP	NLRP4	ENST00000301295	human	ensembl	74_37	+1	known	missense	c.683	p.F228C	0.897	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP4	HGNC	ENSG00000160505	tier1	-	-	68	0	0.00	47	23	32.86
NPHP3	0	genome.wustl.edu	37	3	132432010	132432010	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	132432010	132432010	T	-	DEL	NPHP3	ENST00000337331	human	ensembl	74_37	-1	known	frame_shift_del	c.1078	p.S360fs	1.000	superfamily_P-loop_NTPase	pfam_TPR_1,pfam_TPR-3,superfamily_P-loop_NTPase,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NPHP3	HGNC	ENSG00000113971	tier1			157	0	0.00	93	54	36.73
NPHP4	0	genome.wustl.edu	37	1	5925321	5925321	+	Silent	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	5925321	5925321	C	A	SNP	NPHP4	ENST00000378156	human	ensembl	74_37	-1	known	silent	c.3657	p.L1219	1.000	NULL	NULL	-	no_errors	NPHP4	HGNC	ENSG00000131697	tier1	-	-	74	0	0.00	48	27	36.00
NRK	0	genome.wustl.edu	37	X	105183880	105183880	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	X	105183880	105183880	C	G	SNP	NRK	ENST00000428173	human	ensembl	74_37	+1	known	missense	c.3817	p.L1273V	1.000	pfam_Citron,smart_Citron	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Citron,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	NRK	HGNC	ENSG00000123572	tier1	-	-	32	0	0.00	14	15	51.72
NTNG1	0	genome.wustl.edu	37	1	108023343	108023343	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	108023343	108023343	C	T	SNP	NTNG1	ENST00000370068	human	ensembl	74_37	+1	known	missense	c.1501	p.R501W	0.997	NULL	pfam_Laminin_N,pfam_EGF_laminin,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	NTNG1	HGNC	ENSG00000162631	tier1	-	-	44	0	0.00	32	4	11.11
OR5AS1	0	genome.wustl.edu	37	11	55798042	55798042	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	55798042	55798042	A	G	SNP	OR5AS1	ENST00000313555	human	ensembl	74_37	+1	known	missense	c.148	p.N50D	0.002	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5AS1	HGNC	ENSG00000181785	tier1	-	-	83	0	0.00	50	25	33.33
OR6C65	0	genome.wustl.edu	37	12	55794948	55794948	+	Silent	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	12	55794948	55794948	G	T	SNP	OR6C65	ENST00000379665	human	ensembl	74_37	+1	known	silent	c.636	p.V212	0.011	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR6C65	HGNC	ENSG00000205328	tier1	-	-	95	0	0.00	63	12	16.00
OR7E94P	0	genome.wustl.edu	37	4	80508948	80508948	+	RNA	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	4	80508948	80508948	G	A	SNP	OR7E94P	ENST00000601375	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	OR7E94P	HGNC	ENSG00000249646	tier1	-	-	56	0	0.00	32	12	27.27
OR8D2	0	genome.wustl.edu	37	11	124189277	124189277	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	124189277	124189277	C	G	SNP	OR8D2	ENST00000357438	human	ensembl	74_37	-1	known	missense	c.817	p.V273L	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8D2	HGNC	ENSG00000197263	tier1	-	-	80	0	0.00	49	35	41.18
OTOA	0	genome.wustl.edu	37	16	21716574	21716574	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	16	21716574	21716574	G	T	SNP	OTOA	ENST00000286149	human	ensembl	74_37	+1	known	missense	c.1107	p.K369N	0.947	NULL	NULL	-	no_errors	OTOA	HGNC	ENSG00000155719				43	0	0.00	52	3	5.45
PCDHA4	0	genome.wustl.edu	37	5	140187662	140187662	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	5	140187662	140187662	C	T	SNP	PCDHA4	ENST00000530339	human	ensembl	74_37	+1	known	missense	c.890	p.P297L	0.006	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA4	HGNC	ENSG00000204967	tier1	-	-	86	0	0.00	41	12	22.64
PDE4DIP	0	genome.wustl.edu	37	1	144859760	144859760	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	144859760	144859760	T	G	SNP	PDE4DIP	ENST00000369356	human	ensembl	74_37	-1	known	missense	c.6324	p.Q2108H	1.000	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	tier1	-	-	60	0	0.00	45	5	10.00
PET112	0	genome.wustl.edu	37	4	152601009	152601009	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	4	152601009	152601009	C	A	SNP	PET112	ENST00000263985	human	ensembl	74_37	-1	known	missense	c.1366	p.D456Y	0.695	pfam_Asn/Gln_amidotransferase,superfamily_Asn/Gln_tRNA_amidoTrfrase-rel,smart_Asn/Gln_amidotransferase,tigrfam_Apn/Gln-ADT_bsu	pfam_Asn/Gln-tRNA_Trfase_suB/E_cat,pfam_Asn/Gln_amidotransferase,superfamily_Asn/Gln_tRNA_amidoTrfrase-rel,smart_Asn/Gln_amidotransferase,tigrfam_Apn/Gln-ADT_bsu	-	no_errors	PET112	HGNC	ENSG00000059691	tier1	-	-	97	0	0.00	49	28	36.36
PHF2	0	genome.wustl.edu	37	9	96420446	96420446	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	9	96420446	96420446	G	T	SNP	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	missense	c.1167	p.K389N	0.997	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724				71	0	0.00	76	4	5.00
PIDD	0	genome.wustl.edu	37	11	801462	801462	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	801462	801462	G	C	SNP	PIDD	ENST00000347755	human	ensembl	74_37	-1	known	missense	c.1465	p.R489G	0.950	pfam_ZU5,pfscan_ZU5	pfam_Peptidase_S68_pidd,pfam_Death_domain,pfam_Leu-rich_rpt,pfam_ZU5,superfamily_DEATH-like_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Death_domain,pfscan_Death_domain,pfscan_ZU5	-	no_errors	PIDD	HGNC	ENSG00000177595	tier1	-	-	59	0	0.00	40	12	23.08
PIK3CA	0	genome.wustl.edu	37	3	178952085	178952085	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	178952085	178952085	A	T	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.3140	p.H1047L	1.000	superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	tier1	rs121913279	-	53	0	0.00	36	11	23.40
PIP5K1A	0	genome.wustl.edu	37	1	151219428	151219428	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	151219428	151219428	C	T	SNP	PIP5K1A	ENST00000414290	human	ensembl	74_37	+1	known	nonsense	c.499	p.Q167*	0.994	NULL	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP5K1A	HGNC	ENSG00000143398	tier1	-	-	59	0	0.00	33	23	41.07
PLCB1	0	genome.wustl.edu	37	20	8707959	8707959	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	20	8707959	8707959	G	C	SNP	PLCB1	ENST00000338037	human	ensembl	74_37	+1	known	missense	c.1682	p.R561T	1.000	pirsf_PLC-beta,pfam_PLipase_C_Pinositol-sp_Y,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_Pinositol-sp_Y,pfscan_PLipase_C_Pinositol-sp_Y	pirsf_PLC-beta,pfam_PLC-beta_C,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB1	HGNC	ENSG00000182621	tier1	-	-	35	0	0.00	13	13	50.00
PLCE1	0	genome.wustl.edu	37	10	95993828	95993828	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	10	95993828	95993828	A	T	SNP	PLCE1	ENST00000260766	human	ensembl	74_37	+1	known	missense	c.1973	p.K658I	1.000	pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_Ras-assoc,pfam_RasGRF_CDC25,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_Ras_GEF_dom,superfamily_C2_dom,smart_RasGRF_CDC25,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,smart_Ras-assoc,pfscan_C2_dom,pfscan_Ras-assoc,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,pfscan_RasGRF_CDC25,prints_Pinositol_PLipase_C	-	no_errors	PLCE1	HGNC	ENSG00000138193	tier1	-	-	66	0	0.00	46	29	38.67
PLCG2	0	genome.wustl.edu	37	16	81942086	81942086	+	Silent	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	16	81942086	81942086	G	A	SNP	PLCG2	ENST00000359376	human	ensembl	74_37	+1	known	silent	c.1623	p.T541	0.592	pfam_SH2,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_SH2,pirsf_PLC-gamma,pfscan_SH2	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_SH3_domain,pfam_C2_dom,pfam_PLipase_C_EF-hand-like,pfam_SH3_2,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pirsf_PLC-gamma,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2,prints_SH3_domain	-	no_errors	PLCG2	HGNC	ENSG00000197943	tier1	-	-	116	0	0.00	68	30	30.61
POLR2M	0	genome.wustl.edu	37	15	57999364	57999364	+	RNA	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	15	57999364	57999364	C	T	SNP	POLR2M	ENST00000464308	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	POLR2M	HGNC	ENSG00000255529	tier1	-	-	50	0	0.00	31	8	20.51
POU4F2	0	genome.wustl.edu	37	4	147561949	147561949	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	4	147561949	147561949	G	T	SNP	POU4F2	ENST00000281321	human	ensembl	74_37	+1	known	missense	c.1219	p.A407S	1.000	smart_Homeobox_dom	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F2	HGNC	ENSG00000151615				24	0	0.00	30	2	6.25
PRAMEF10	0	genome.wustl.edu	37	1	12954550	12954550	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	12954550	12954550	G	A	SNP	PRAMEF10	ENST00000235347	human	ensembl	74_37	-1	known	missense	c.733	p.R245C	0.001	NULL	NULL	-	no_errors	PRAMEF10	HGNC	ENSG00000187545	tier1	-	-	303	0	0.00	163	103	38.58
PSD	0	genome.wustl.edu	37	10	104168709	104168709	+	RNA	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	10	104168709	104168709	G	A	SNP	PSD	ENST00000461698	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.395	-	-	-	no_errors	PSD	HGNC	ENSG00000059915	tier1	-	-	13	0	0.00	4	5	55.56
PSG6	0	genome.wustl.edu	37	19	43411757	43411757	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	43411757	43411757	C	T	SNP	PSG6	ENST00000292125	human	ensembl	74_37	-1	known	missense	c.956	p.R319H	0.001	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PSG6	HGNC	ENSG00000170848	tier1	-	-	289	0	0.00	198	90	31.25
PSMC3	0	genome.wustl.edu	37	11	47444219	47444219	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	47444219	47444219	C	A	SNP	PSMC3	ENST00000298852	human	ensembl	74_37	-1	known	missense	c.790	p.G264C	1.000	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC3	HGNC	ENSG00000165916	tier1	-	-	77	0	0.00	43	30	41.10
PXDNL	0	genome.wustl.edu	37	8	52384761	52384761	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	8	52384761	52384761	A	C	SNP	PXDNL	ENST00000356297	human	ensembl	74_37	-1	known	missense	c.798	p.I266M	0.997	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDNL	HGNC	ENSG00000147485	tier1	-	-	86	0	0.00	45	24	34.78
RABGAP1L	0	genome.wustl.edu	37	1	174652677	174652677	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	174652677	174652677	T	G	SNP	RABGAP1L	ENST00000251507	human	ensembl	74_37	+1	known	missense	c.1842	p.D614E	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_Kinesin-like,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1L	HGNC	ENSG00000152061	tier1	-	-	105	0	0.00	74	34	31.19
RABL5	0	genome.wustl.edu	37	7	100958483	100958483	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	7	100958483	100958483	A	G	SNP	RABL5	ENST00000315322	human	ensembl	74_37	-1	known	missense	c.490	p.Y164H	1.000	NULL	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_MIRO-like,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase	-	no_errors	RABL5	HGNC	ENSG00000128581	tier1	-	-	85	0	0.00	71	24	25.26
RAC1	0	genome.wustl.edu	37	7	6426904	6426904	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	7	6426904	6426904	A	T	SNP	RAC1	ENST00000356142	human	ensembl	74_37	+1	known	missense	c.97	p.I33F	1.000	pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAC1	HGNC	ENSG00000136238	tier1	-	-	139	0	0.00	69	22	24.18
RIN2	0	genome.wustl.edu	37	20	19981627	19981627	+	RNA	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	20	19981627	19981627	G	T	SNP	RIN2	ENST00000484638	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RIN2	HGNC	ENSG00000132669	tier1	-	-	40	0	0.00	34	4	10.53
RLF	0	genome.wustl.edu	37	1	40702482	40702482	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	40702482	40702482	C	T	SNP	RLF	ENST00000372771	human	ensembl	74_37	+1	known	missense	c.2108	p.A703V	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	RLF	HGNC	ENSG00000117000	tier1	-	-	82	0	0.00	71	4	5.33
ROPN1L	0	genome.wustl.edu	37	5	10442275	10442275	+	RNA	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	5	10442275	10442275	G	T	SNP	ROPN1L	ENST00000510520	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	ROPN1L	HGNC	ENSG00000145491	tier1	-	-	62	0	0.00	55	4	6.78
RPL3	0	genome.wustl.edu	37	22	39710147	39710147	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	22	39710147	39710147	C	T	SNP	RPL3	ENST00000216146	human	ensembl	74_37	-1	known	missense	c.916	p.D306N	0.998	pfam_Ribosomal_L3,superfamily_Transl_B-barrel	pfam_Ribosomal_L3,superfamily_Transl_B-barrel	-	no_errors	RPL3	HGNC	ENSG00000100316	tier1	-	-	50	0	0.00	29	17	36.96
RPL8	0	genome.wustl.edu	37	8	146015317	146015317	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	8	146015317	146015317	G	A	SNP	RPL8	ENST00000262584	human	ensembl	74_37	-1	known	missense	c.646	p.H216Y	1.000	pfam_Ribosomal_L2_C,superfamily_Translation_prot_SH3-like,pirsf_Ribosomal_L2	pfam_Ribosomal_L2_C,pfam_Rbsml_prot_L2_RNA-bd_dom,superfamily_Translation_prot_SH3-like,superfamily_NA-bd_OB-fold,pirsf_Ribosomal_L2	-	no_errors	RPL8	HGNC	ENSG00000161016	tier1	-	-	54	0	0.00	30	15	33.33
S1PR1	0	genome.wustl.edu	37	1	101705189	101705189	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	101705189	101705189	A	G	SNP	S1PR1	ENST00000305352	human	ensembl	74_37	+1	known	missense	c.649	p.I217V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_EDG1_rcpt,prints_S1P_rcpt,prints_GPCR_Rhodpsn,prints_Melcrt_ACTH_rcpt	-	no_errors	S1PR1	HGNC	ENSG00000170989	tier1	-	-	20	0	0.00	13	5	27.78
SAMD4B	0	genome.wustl.edu	37	19	39870719	39870719	+	Silent	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	39870719	39870719	G	A	SNP	SAMD4B	ENST00000314471	human	ensembl	74_37	+1	known	silent	c.1644	p.Q548	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	-	no_errors	SAMD4B	HGNC	ENSG00000179134	tier1	-	-	90	0	0.00	38	24	38.71
SCUBE2	0	genome.wustl.edu	37	11	9113009	9113011	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	9113009	9113011	GCA	-	DEL	SCUBE2	ENST00000457346	human	ensembl	74_37	-1	known	in_frame_del	c.67_65	p.L22in_frame_del	0.986:0.983:0.981	NULL	pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	SCUBE2	HGNC	ENSG00000175356	tier1			10	0	0.00	5	3	37.50
SF3A2	0	genome.wustl.edu	37	19	2243467	2243469	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	2243467	2243469	CCT	-	DEL	SF3A2	ENST00000221494	human	ensembl	74_37	+1	known	in_frame_del	c.50_52	p.S20in_frame_del	1.000:0.996:1.000	NULL	smart_Znf_U1,pfscan_Znf_C2H2_matrin	-	no_errors	SF3A2	HGNC	ENSG00000104897	tier1			66	0	0.00	49	21	30.00
SHROOM3	0	genome.wustl.edu	37	4	77357289	77357289	+	Silent	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	4	77357289	77357289	G	T	SNP	SHROOM3	ENST00000296043	human	ensembl	74_37	+1	known	silent	c.84	p.L28	1.000	superfamily_PDZ,pfscan_PDZ	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771	tier1	-	-	55	0	0.00	59	4	6.35
SLC15A2	0	genome.wustl.edu	37	3	121616250	121616250	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	121616250	121616250	A	G	SNP	SLC15A2	ENST00000489711	human	ensembl	74_37	+1	known	missense	c.209	p.Y70C	1.000	superfamily_MFS_dom_general_subst_transpt,tigrfam_Oligopep_transport	pfam_POT_fam,superfamily_MFS_dom_general_subst_transpt,tigrfam_Oligopep_transport	-	no_errors	SLC15A2	HGNC	ENSG00000163406	tier1	-	-	46	0	0.00	26	19	42.22
SLC16A8	0	genome.wustl.edu	37	22	38478026	38478026	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	22	38478026	38478026	G	T	SNP	SLC16A8	ENST00000320521	human	ensembl	74_37	-1	known	missense	c.228	p.S76R	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	-	no_errors	SLC16A8	HGNC	ENSG00000100156	tier1	-	-	111	0	0.00	72	43	37.39
SLC22A11	0	genome.wustl.edu	37	11	64329782	64329782	+	Silent	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	64329782	64329782	G	T	SNP	SLC22A11	ENST00000301891	human	ensembl	74_37	+1	known	silent	c.696	p.T232	0.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A11	HGNC	ENSG00000168065				42	0	0.00	39	3	7.14
SLC6A12	0	genome.wustl.edu	37	12	306029	306029	+	Silent	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	12	306029	306029	G	A	SNP	SLC6A12	ENST00000359674	human	ensembl	74_37	-1	known	silent	c.1095	p.I365	0.851	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_betaine	-	no_errors	SLC6A12	HGNC	ENSG00000111181	tier1	-	-	52	0	0.00	27	29	51.79
SLC9A8	0	genome.wustl.edu	37	20	48471998	48471998	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	20	48471998	48471998	C	A	SNP	SLC9A8	ENST00000417961	human	ensembl	74_37	+1	known	missense	c.641	p.S214Y	1.000	pfam_Cation/H_exchanger,prints_NaH_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A8	HGNC	ENSG00000197818	tier1	-	-	115	0	0.00	66	34	34.00
SMARCA4	0	genome.wustl.edu	37	19	11132513	11132513	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	11132513	11132513	C	T	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.2729	p.T910M	0.999	pfam_SNF2_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	tier1	-	-	37	0	0.00	36	22	37.93
SMIM8	0	genome.wustl.edu	37	6	88049924	88049924	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	6	88049924	88049924	G	T	SNP	SMIM8	ENST00000229570	human	ensembl	74_37	+1	known	missense	c.226	p.D76Y	1.000	NULL	NULL	-	no_errors	SMIM8	HGNC	ENSG00000111850				57	0	0.00	33	2	5.71
SORCS3	0	genome.wustl.edu	37	10	106907465	106907465	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	10	106907465	106907465	G	A	SNP	SORCS3	ENST00000369701	human	ensembl	74_37	+1	known	missense	c.1393	p.D465N	1.000	smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS3	HGNC	ENSG00000156395	tier1	-	-	142	0	0.00	73	41	35.96
SP100	0	genome.wustl.edu	37	2	231334496	231334496	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	2	231334496	231334496	A	-	DEL	SP100	ENST00000341950	human	ensembl	74_37	+1	known	frame_shift_del	c.1350	p.K453fs	0.007	NULL	pfam_Sp100	-	no_errors	SP100	HGNC	ENSG00000067066	tier1			45	0	0.00	32	7	17.95
SP7	0	genome.wustl.edu	37	12	53723184	53723184	+	Silent	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	12	53723184	53723184	G	A	SNP	SP7	ENST00000303846	human	ensembl	74_37	-1	known	silent	c.42	p.S14	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP7	HGNC	ENSG00000170374	tier1	-	-	48	0	0.00	23	12	34.29
SPAG5	0	genome.wustl.edu	37	17	26905265	26905265	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	17	26905265	26905265	C	T	SNP	SPAG5	ENST00000321765	human	ensembl	74_37	-1	known	missense	c.3400	p.E1134K	0.207	NULL	NULL	-	no_errors	SPAG5	HGNC	ENSG00000076382	tier1	-	-	34	0	0.00	15	11	42.31
SPOP	0	genome.wustl.edu	37	17	47699360	47699360	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	17	47699360	47699360	C	T	SNP	SPOP	ENST00000347630	human	ensembl	74_37	-1	known	missense	c.148	p.E50K	1.000	pfam_MATH,superfamily_TRAF-like,smart_MATH,pfscan_MATH	pfam_BTB_POZ,pfam_MATH,superfamily_TRAF-like,superfamily_BTB/POZ_fold,smart_MATH,smart_BTB/POZ-like,pfscan_BTB/POZ-like,pfscan_MATH	-	no_errors	SPOP	HGNC	ENSG00000121067	tier1	-	-	108	0	0.00	56	20	26.32
STON1-GTF2A1L	0	genome.wustl.edu	37	2	48808503	48808503	+	Nonsense_Mutation	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	2	48808503	48808503	C	G	SNP	STON1-GTF2A1L	ENST00000309827	human	ensembl	74_37	+1	known	nonsense	c.731	p.S244*	0.108	NULL	pfam_TFIIA_asu/bsu,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,superfamily_TFIIA_b-brl,superfamily_TFIIA_a-hlx,pfscan_Clathrin_mu_C,pfscan_SHD	-	no_errors	STON1-GTF2A1L	HGNC	ENSG00000068781	tier1	-	-	78	0	0.00	34	22	38.60
SYCP2	0	genome.wustl.edu	37	20	58441562	58441562	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	20	58441562	58441562	C	T	SNP	SYCP2	ENST00000357552	human	ensembl	74_37	-1	known	missense	c.4208	p.S1403N	0.456	NULL	NULL	-	no_errors	SYCP2	HGNC	ENSG00000196074	tier1	-	-	101	0	0.00	78	50	39.06
SYNM	0	genome.wustl.edu	37	15	99671376	99671376	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	15	99671376	99671376	G	A	SNP	SYNM	ENST00000336292	human	ensembl	74_37	+1	known	missense	c.2808	p.M936I	0.000	NULL	pfam_IF	-	no_errors	SYNM	HGNC	ENSG00000182253	tier1	-	-	39	0	0.00	27	22	44.90
TAF7	0	genome.wustl.edu	37	5	140699108	140699108	+	Silent	SNP	T	T	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	5	140699108	140699108	T	C	SNP	TAF7	ENST00000313368	human	ensembl	74_37	-1	known	silent	c.504	p.R168	0.177	pfam_TAFII55_prot_cons_reg	pfam_TAFII55_prot_cons_reg	-	no_errors	TAF7	HGNC	ENSG00000178913	tier1	-	-	35	0	0.00	20	9	31.03
TANC2	0	genome.wustl.edu	37	17	61497497	61497497	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	17	61497497	61497497	C	T	SNP	TANC2	ENST00000424789	human	ensembl	74_37	+1	known	missense	c.4154	p.P1385L	0.065	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC2	HGNC	ENSG00000170921	tier1	-	-	47	0	0.00	33	16	32.65
TBL2	0	genome.wustl.edu	37	7	72987738	72987738	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	7	72987738	72987738	C	T	SNP	TBL2	ENST00000450285	human	ensembl	74_37	-1	known	missense	c.487	p.G163R	0.282	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TBL2	HGNC	ENSG00000106638	tier1	-	-	42	0	0.00	33	8	19.51
TET3	0	genome.wustl.edu	37	2	74329136	74329136	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	2	74329136	74329136	G	A	SNP	TET3	ENST00000409262	human	ensembl	74_37	+1	known	missense	c.4816	p.G1606R	1.000	NULL	NULL	-	no_errors	TET3	HGNC	ENSG00000187605	tier1	-	-	9	0	0.00	13	9	40.91
TFDP2	0	genome.wustl.edu	37	3	141820587	141820587	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	141820587	141820587	G	A	SNP	TFDP2	ENST00000489671	human	ensembl	74_37	-1	known	missense	c.5	p.T2M	0.992	pirsf_Transcrpt_fac_DP	pfam_Transc_factor_DP_C,pfam_E2F_TDP,pirsf_Transcrpt_fac_DP	-	no_errors	TFDP2	HGNC	ENSG00000114126	tier1	-	-	96	0	0.00	63	24	27.59
TGFBR2	0	genome.wustl.edu	37	3	30715618	30715618	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	3	30715618	30715618	G	A	SNP	TGFBR2	ENST00000359013	human	ensembl	74_37	+1	known	missense	c.1351	p.A451T	1.000	pirsf_Transform_growth_fac-b_typ-2,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_TGFB_receptor,pfscan_Prot_kinase_dom	-	no_errors	TGFBR2	HGNC	ENSG00000163513	tier1	-	-	87	0	0.00	61	32	34.41
THAP11	0	genome.wustl.edu	37	16	67877021	67877021	+	Silent	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	16	67877021	67877021	C	T	SNP	THAP11	ENST00000303596	human	ensembl	74_37	+1	known	silent	c.564	p.I188	0.997	NULL	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP11	HGNC	ENSG00000168286	tier1	-	-	53	0	0.00	27	22	44.90
TNNI3	0	genome.wustl.edu	37	19	55668465	55668465	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	55668465	55668465	G	A	SNP	TNNI3	ENST00000344887	human	ensembl	74_37	-1	known	missense	c.61	p.R21C	0.998	pfam_Troponin-I_N	pfam_Troponin,pfam_Troponin-I_N	-	no_errors	TNNI3	HGNC	ENSG00000129991	tier1	-	-	119	0	0.00	81	45	35.71
TOM1L2	0	genome.wustl.edu	37	17	17783045	17783045	+	Silent	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	17	17783045	17783045	G	T	SNP	TOM1L2	ENST00000379504	human	ensembl	74_37	-1	known	silent	c.673	p.R225	1.000	pfam_GAT,pirsf_TOM1,pfscan_GAT	pfam_VHS,pfam_GAT,superfamily_ENTH_VHS,smart_VHS_subgr,pirsf_TOM1,pfscan_GAT,pfscan_VHS	-	no_errors	TOM1L2	HGNC	ENSG00000175662	tier1	-	-	54	0	0.00	47	4	7.84
TPM3P9	0	genome.wustl.edu	37	19	53945524	53945524	+	RNA	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	53945524	53945524	A	G	SNP	TPM3P9	ENST00000424846	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TPM3P9	HGNC	ENSG00000241015	tier1	-	-	83	0	0.00	36	19	34.55
TPM4	0	genome.wustl.edu	37	19	16186866	16186866	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	16186866	16186866	G	C	SNP	TPM4	ENST00000344824	human	ensembl	74_37	+1	known	missense	c.124	p.E42Q	1.000	NULL	pfam_Tropomyosin,prints_Tropomyosin	-	no_errors	TPM4	HGNC	ENSG00000167460	tier1	-	-	91	0	0.00	48	18	27.27
TPM4	0	genome.wustl.edu	37	19	16186908	16186908	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	16186908	16186908	G	A	SNP	TPM4	ENST00000344824	human	ensembl	74_37	+1	known	missense	c.166	p.E56K	1.000	pfam_Tropomyosin	pfam_Tropomyosin,prints_Tropomyosin	-	no_errors	TPM4	HGNC	ENSG00000167460	tier1	-	-	123	0	0.00	64	33	34.02
TPP2	0	genome.wustl.edu	37	13	103301602	103301602	+	RNA	DEL	T	T	-			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	13	103301602	103301602	T	-	DEL	TPP2	ENST00000490420	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TPP2	HGNC	ENSG00000134900	tier1			27	0	0.00	29	6	17.14
TPTE2	0	genome.wustl.edu	37	13	20012288	20012288	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	13	20012288	20012288	T	A	SNP	TPTE2	ENST00000382977	human	ensembl	74_37	-1	known	missense	c.979	p.T327S	0.984	pfam_Dual-sp_phosphatase_cat-dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ	pfam_Tensin_phosphatase_C2-dom,pfam_Ion_trans_dom,pfam_Dual-sp_phosphatase_cat-dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE2	HGNC	ENSG00000132958	tier1	-	-	131	0	0.00	75	34	31.19
TRAPPC5	0	genome.wustl.edu	37	19	7747244	7747244	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	7747244	7747244	G	T	SNP	TRAPPC5	ENST00000317378	human	ensembl	74_37	+1	known	missense	c.105	p.E35D	1.000	pfam_TRAPP_component,superfamily_NO_sig/Golgi_transp_ligand-bd,pirsf_TRAPP-I_su5	pfam_TRAPP_component,superfamily_NO_sig/Golgi_transp_ligand-bd,pirsf_TRAPP-I_su5	-	no_errors	TRAPPC5	HGNC	ENSG00000181029	tier1	-	-	37	0	0.00	27	4	12.90
TRIM35	0	genome.wustl.edu	37	8	27156030	27156030	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	8	27156030	27156030	G	A	SNP	TRIM35	ENST00000305364	human	ensembl	74_37	-1	known	missense	c.482	p.A161V	1.000	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM35	HGNC	ENSG00000104228	tier1	-	-	38	0	0.00	21	9	30.00
TRIM56	0	genome.wustl.edu	37	7	100730776	100730776	+	Silent	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	7	100730776	100730776	G	A	SNP	TRIM56	ENST00000306085	human	ensembl	74_37	+1	known	silent	c.183	p.E61	0.017	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_CheY-like_superfamily,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM56	HGNC	ENSG00000169871	tier1	-	-	22	0	0.00	36	10	21.74
TRIM56	0	genome.wustl.edu	37	7	100731162	100731162	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	7	100731162	100731162	G	C	SNP	TRIM56	ENST00000306085	human	ensembl	74_37	+1	known	missense	c.569	p.R190T	0.964	pfam_Znf_B-box,smart_Znf_B-box,pfscan_Znf_B-box	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_CheY-like_superfamily,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM56	HGNC	ENSG00000169871	tier1	-	-	59	0	0.00	30	7	18.92
TRIM56	0	genome.wustl.edu	37	7	100730795	100730795	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	7	100730795	100730795	G	C	SNP	TRIM56	ENST00000306085	human	ensembl	74_37	+1	known	missense	c.202	p.E68Q	0.000	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_CheY-like_superfamily,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM56	HGNC	ENSG00000169871				21	0	0.00	29	9	22.50
TRMT44	0	genome.wustl.edu	37	4	8448312	8448312	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	4	8448312	8448312	A	G	SNP	TRMT44	ENST00000513449	human	ensembl	74_37	+1	known	missense	c.35	p.K12R	0.005	NULL	pfam_tRNA_uracil_MeTrfase	-	no_errors	TRMT44	HGNC	ENSG00000155275	tier1	-	-	146	0	0.00	70	44	38.60
TRPA1	0	genome.wustl.edu	37	8	72935276	72935276	+	Silent	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	8	72935276	72935276	G	A	SNP	TRPA1	ENST00000262209	human	ensembl	74_37	-1	known	silent	c.3225	p.I1075	1.000	NULL	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	TRPA1	HGNC	ENSG00000104321	tier1	-	-	71	0	0.00	51	25	32.89
TSR1	0	genome.wustl.edu	37	17	2236267	2236267	+	Silent	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	17	2236267	2236267	C	T	SNP	TSR1	ENST00000301364	human	ensembl	74_37	-1	known	silent	c.1293	p.E431	0.997	NULL	pfam_BMS1_TSR1_C,pfam_AARP2CN,superfamily_Transl_B-barrel,smart_AARP2CN	-	no_errors	TSR1	HGNC	ENSG00000167721	tier1	-	-	72	0	0.00	41	18	30.51
TTC29	0	genome.wustl.edu	37	4	147824756	147824756	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	4	147824756	147824756	C	T	SNP	TTC29	ENST00000398886	human	ensembl	74_37	-1	known	missense	c.604	p.D202N	1.000	NULL	smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC29	HGNC	ENSG00000137473	tier1	-	-	103	0	0.00	60	19	24.05
TUBGCP3	0	genome.wustl.edu	37	13	113158952	113158952	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	13	113158952	113158952	G	T	SNP	TUBGCP3	ENST00000261965	human	ensembl	74_37	-1	known	nonsense	c.2163	p.Y721*	1.000	pfam_TUBGCP	pfam_TUBGCP	-	no_errors	TUBGCP3	HGNC	ENSG00000126216				77	0	0.00	66	4	5.71
TULP4	0	genome.wustl.edu	37	6	158924056	158924056	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	6	158924056	158924056	C	G	SNP	TULP4	ENST00000367097	human	ensembl	74_37	+1	known	missense	c.3361	p.P1121A	0.997	NULL	pfam_Tubby_C,pfam_SOCS_C,pfam_WD40_repeat,superfamily_Tubby_C-like,superfamily_WD40_repeat_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_WD40_repeat,smart_SOCS_C,pfscan_SOCS_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TULP4	HGNC	ENSG00000130338	tier1	-	-	122	0	0.00	44	30	40.54
UBE2D2	0	genome.wustl.edu	37	5	139003036	139003036	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	5	139003036	139003036	G	C	SNP	UBE2D2	ENST00000398733	human	ensembl	74_37	+1	known	missense	c.388	p.D130H	1.000	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2D2	HGNC	ENSG00000131508	tier1	-	-	82	0	0.00	50	39	43.82
UNC13A	0	genome.wustl.edu	37	19	17740954	17740954	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	17740954	17740954	C	A	SNP	UNC13A	ENST00000428389	human	ensembl	74_37	-1	known	missense	c.3933	p.K1311N	1.000	NULL	pfam_Munc13_subgr_dom-2,pfam_C2_dom,pfam_Ca-dep_secretion_activator,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13A	HGNC	ENSG00000130477	tier1	-	-	77	0	0.00	43	24	35.82
UNC79	0	genome.wustl.edu	37	14	94158230	94158230	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	14	94158230	94158230	G	T	SNP	UNC79	ENST00000553484	human	ensembl	74_37	+1	known	missense	c.7591	p.A2531S	0.999	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,superfamily_ARM-type_fold	-	no_errors	UNC79	HGNC	ENSG00000133958	tier1	-	-	63	0	0.00	43	5	10.42
USP47	0	genome.wustl.edu	37	11	11974404	11974404	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	11	11974404	11974404	G	A	SNP	USP47	ENST00000399455	human	ensembl	74_37	+1	known	missense	c.3760	p.E1254K	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP47	HGNC	ENSG00000170242	tier1	-	-	163	0	0.00	87	59	40.41
VARS	0	genome.wustl.edu	37	6	31747232	31747232	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	6	31747232	31747232	C	T	SNP	VARS	ENST00000375663	human	ensembl	74_37	-1	known	missense	c.3370	p.D1124N	0.977	pfam_V/L/I-tRNA-synth_anticodon-bd,superfamily_tRNAsynth_1a_anticodon-bd,tigrfam_Valyl-tRNA_ligase	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Glutathione_S-Trfase_N,pfam_Methionyl/Leucyl_tRNA_Synth,pfam_GST_C,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Glutathione-S-Trfase_C-like,superfamily_tRNA-bd_arm,prints_Valyl-tRNA_ligase,tigrfam_Valyl-tRNA_ligase	-	no_errors	VARS	HGNC	ENSG00000204394	tier1	-	-	51	0	0.00	31	16	34.04
VIL1	0	genome.wustl.edu	37	2	219294100	219294100	+	Silent	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	2	219294100	219294100	G	T	SNP	VIL1	ENST00000248444	human	ensembl	74_37	+1	known	silent	c.660	p.P220	0.005	smart_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	VIL1	HGNC	ENSG00000127831				44	0	0.00	34	2	5.56
VNN1	0	genome.wustl.edu	37	6	133015212	133015212	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	6	133015212	133015212	G	T	SNP	VNN1	ENST00000367928	human	ensembl	74_37	-1	known	missense	c.451	p.Q151K	0.001	pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pirsf_Biotinidase_euk,pfscan_C-N_Hydrolase	pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pirsf_Biotinidase_euk,pfscan_C-N_Hydrolase	-	no_errors	VNN1	HGNC	ENSG00000112299	tier1	-	-	84	0	0.00	76	4	5.00
WASF3	0	genome.wustl.edu	37	13	27255248	27255248	+	Silent	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	13	27255248	27255248	G	T	SNP	WASF3	ENST00000335327	human	ensembl	74_37	+1	known	silent	c.774	p.L258	1.000	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF3	HGNC	ENSG00000132970	tier1	-	-	187	0	0.00	121	50	29.24
WDR16	0	genome.wustl.edu	37	17	9497542	9497542	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	17	9497542	9497542	C	G	SNP	WDR16	ENST00000299764	human	ensembl	74_37	+1	known	missense	c.470	p.A157G	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR16	HGNC	ENSG00000166596	tier1	-	-	61	0	0.00	33	25	43.10
WHSC1	0	genome.wustl.edu	37	4	1980408	1980409	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	4	1980408	1980409	-	C	INS	WHSC1	ENST00000382891	human	ensembl	74_37	+1	known	frame_shift_ins	c.3870_3871	p.S1291fs	0.978:0.992	NULL	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,pfam_HMG_box_dom,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_PWWP_dom,smart_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_HMG_box_dom	-	no_errors	WHSC1	HGNC	ENSG00000109685	tier1			89	0	0.00	64	22	25.58
WWC1	0	genome.wustl.edu	37	5	167826550	167826550	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	5	167826550	167826550	C	A	SNP	WWC1	ENST00000265293	human	ensembl	74_37	+1	known	missense	c.568	p.R190S	0.999	NULL	pfam_WW_dom,superfamily_C2_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WWC1	HGNC	ENSG00000113645				39	0	0.00	36	3	7.69
ZCCHC24	0	genome.wustl.edu	37	10	81145972	81145972	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	10	81145972	81145972	C	T	SNP	ZCCHC24	ENST00000372333	human	ensembl	74_37	-1	known	missense	c.676	p.G226R	0.000	NULL	NULL	-	no_errors	ZCCHC24	HGNC	ENSG00000165424	tier1	-	-	9	0	0.00	8	8	50.00
ZFC3H1	0	genome.wustl.edu	37	12	72021557	72021558	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	12	72021557	72021558	-	G	INS	ZFC3H1	ENST00000378743	human	ensembl	74_37	-1	known	frame_shift_ins	c.4104_4103	p.Y1369fs	0.896:1.000	pfscan_TPR-contain_dom	pfam_Putative_zinc-finger_domain,smart_HAT,pfscan_TPR-contain_dom	-	no_errors	ZFC3H1	HGNC	ENSG00000133858	tier1			91	0	0.00	64	18	21.95
ZNF266	0	genome.wustl.edu	37	19	9524911	9524911	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	9524911	9524911	G	T	SNP	ZNF266	ENST00000361151	human	ensembl	74_37	-1	known	missense	c.690	p.H230Q	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,smart_Znf_BED_prd,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF266	HGNC	ENSG00000174652				69	0	0.00	54	3	5.26
ZNF354C	0	genome.wustl.edu	37	5	178506868	178506868	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	5	178506868	178506868	C	T	SNP	ZNF354C	ENST00000315475	human	ensembl	74_37	+1	known	nonsense	c.1435	p.Q479*	0.924	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF354C	HGNC	ENSG00000177932	tier1	-	-	95	0	0.00	69	17	19.77
ZNF480	0	genome.wustl.edu	37	19	52825738	52825738	+	Nonsense_Mutation	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	52825738	52825738	C	G	SNP	ZNF480	ENST00000468240	human	ensembl	74_37	+1	known	nonsense	c.1235	p.S412*	0.074	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF480	HGNC	ENSG00000198464	tier1	-	-	74	0	0.00	48	22	31.43
ZNF492	0	genome.wustl.edu	37	19	22847630	22847630	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	22847630	22847630	C	T	SNP	ZNF492	ENST00000456783	human	ensembl	74_37	+1	known	missense	c.1159	p.H387Y	0.999	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF492	HGNC	ENSG00000229676	tier1	-	-	77	0	0.00	66	20	23.26
ZNF516	0	genome.wustl.edu	37	18	74153320	74153320	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	18	74153320	74153320	G	A	SNP	ZNF516	ENST00000443185	human	ensembl	74_37	-1	known	missense	c.1691	p.S564L	0.984	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF516	HGNC	ENSG00000101493				11	0	0.00	7	5	41.67
ZNF607	0	genome.wustl.edu	37	19	38190339	38190339	+	Silent	SNP	G	G	T			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	38190339	38190339	G	T	SNP	ZNF607	ENST00000355202	human	ensembl	74_37	-1	known	silent	c.693	p.G231	0.783	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF607	HGNC	ENSG00000198182				77	0	0.00	71	4	5.33
ZNF672	0	genome.wustl.edu	37	1	249142289	249142289	+	Silent	SNP	C	C	G			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	1	249142289	249142289	C	G	SNP	ZNF672	ENST00000306562	human	ensembl	74_37	+1	known	silent	c.816	p.R272	0.534	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF672	HGNC	ENSG00000171161				8	0	0.00	8	3	27.27
ZNF90	0	genome.wustl.edu	37	19	20190747	20190747	+	RNA	DEL	T	T	-			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	19	20190747	20190747	T	-	DEL	ZNF90	ENST00000492328	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZNF90	HGNC	ENSG00000213988	tier1			16	0	0.00	25	5	16.67
ZSWIM6	0	genome.wustl.edu	37	5	60768825	60768825	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A88W-01A-11D-A351-09	TCGA-L5-A88W-11A-11D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	d3c1f23e-b6f3-471f-9804-fe2539e311cd	77c96d3d-2e13-42c2-8ed4-d1708d5aca1d	5	60768825	60768825	G	A	SNP	ZSWIM6	ENST00000252744	human	ensembl	74_37	+1	novel	missense	c.994	p.E332K	1.000	NULL	pfscan_Znf_SWIM,prints_Antifreeze_1	-	no_errors	ZSWIM6	HGNC	ENSG00000130449	tier1	-	-	35	0	0.00	28	18	39.13
