Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA12	0	genome.wustl.edu	37	2	215855534	215855534	+	Silent	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	215855534	215855534	G	T	SNP	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	silent	c.3516	p.T1172	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452	tier1	-	-	51	0	0.00	67	4	5.63
ABCA12	0	genome.wustl.edu	37	2	215928909	215928909	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	215928909	215928909	C	T	SNP	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	missense	c.197	p.G66E	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452	tier1	-	-	44	0	0.00	58	4	6.45
ABCA7	0	genome.wustl.edu	37	19	1046340	1046340	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	1046340	1046340	C	T	SNP	ABCA7	ENST00000263094	human	ensembl	74_37	+1	known	silent	c.1557	p.S519	0.843	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA7	HGNC	ENSG00000064687				91	0	0.00	72	4	5.26
ABCG1	0	genome.wustl.edu	37	21	43717138	43717138	+	RNA	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	21	43717138	43717138	G	A	SNP	ABCG1	ENST00000462050	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ABCG1	HGNC	ENSG00000160179	tier1	-	-	13	0	0.00	5	8	61.54
ACAD8	0	genome.wustl.edu	37	11	134128431	134128431	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	134128431	134128431	A	G	SNP	ACAD8	ENST00000281182	human	ensembl	74_37	+1	known	missense	c.403	p.S135G	0.987	pfam_AcylCoA_DH/ox_N,superfamily_AcylCoA_DH/oxidase_NM_dom	pfam_AcylCo_DH/oxidase_C,pfam_AcylCoA_DH/ox_N,pfam_Acyl-CoA_DH_2_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C	-	no_errors	ACAD8	HGNC	ENSG00000151498	tier1	-	-	50	0	0.00	41	4	8.89
ACBD5	0	genome.wustl.edu	37	10	27507044	27507044	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	10	27507044	27507044	T	C	SNP	ACBD5	ENST00000375888	human	ensembl	74_37	-1	known	missense	c.721	p.K241E	0.999	pirsf_M-assoc_diazepam-bd-inh	pfam_Acyl-CoA-binding_protein,superfamily_Acyl-CoA-binding_protein,pirsf_M-assoc_diazepam-bd-inh,prints_Acyl-CoA-binding_protein	-	no_errors	ACBD5	HGNC	ENSG00000107897	tier1	-	-	43	0	0.00	50	4	7.41
ADAMTSL1	0	genome.wustl.edu	37	9	18775775	18775775	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	9	18775775	18775775	G	T	SNP	ADAMTSL1	ENST00000380548	human	ensembl	74_37	+1	novel	missense	c.2432	p.R811L	0.994	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031	tier1	-	-	43	0	0.00	55	4	6.78
ADRA1A	0	genome.wustl.edu	37	8	26614236	26614236	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	8	26614236	26614236	T	G	SNP	ADRA1A	ENST00000380581	human	ensembl	74_37	-1	known	missense	c.944	p.K315T	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_ADRA1A_rcpt,prints_ADR_fam	-	no_errors	ADRA1A	HGNC	ENSG00000120907	tier1	-	-	49	0	0.00	49	5	9.26
AHCYL1	0	genome.wustl.edu	37	1	110557445	110557445	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	110557445	110557445	G	T	SNP	AHCYL1	ENST00000369799	human	ensembl	74_37	+1	known	missense	c.641	p.R214L	1.000	pfam_Adenosylhomocysteinase,pirsf_Adenosylhomocysteinase,tigrfam_Adenosylhomocysteinase	pfam_Adenosylhomocysteinase,pfam_Ado_hCys_hydrolase_NAD-bd,pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_IlvN,pirsf_Adenosylhomocysteinase,tigrfam_Adenosylhomocysteinase	-	no_errors	AHCYL1	HGNC	ENSG00000168710				37	0	0.00	68	5	6.85
AHI1	0	genome.wustl.edu	37	6	135784408	135784408	+	Silent	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	6	135784408	135784408	T	C	SNP	AHI1	ENST00000265602	human	ensembl	74_37	-1	known	silent	c.786	p.E262	0.976	NULL	pfam_WD40_repeat,pfam_SH3_domain,pfam_SH3_2,superfamily_WD40_repeat_dom,superfamily_SH3_domain,smart_WD40_repeat,smart_SH3_domain,pfscan_SH3_domain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_SH3_domain	-	no_errors	AHI1	HGNC	ENSG00000135541	tier1	-	-	30	0	0.00	17	8	32.00
AICDA	0	genome.wustl.edu	37	12	8759587	8759587	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	8759587	8759587	C	A	SNP	AICDA	ENST00000229335	human	ensembl	74_37	-1	known	missense	c.30	p.K10N	0.970	pfam_APOBEC_N	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	AICDA	HGNC	ENSG00000111732	tier1	-	-	41	0	0.00	50	6	10.71
ALMS1	0	genome.wustl.edu	37	2	73676804	73676804	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	73676804	73676804	C	T	SNP	ALMS1	ENST00000264448	human	ensembl	74_37	+1	known	silent	c.3147	p.Y1049	0.000	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127	tier1	-	-	37	0	0.00	43	4	8.51
ALOX12B	0	genome.wustl.edu	37	17	7984078	7984078	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	7984078	7984078	C	A	SNP	ALOX12B	ENST00000319144	human	ensembl	74_37	-1	known	missense	c.548	p.G183V	1.000	superfamily_LipOase_C	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_C,prints_LipOase_mml	-	no_errors	ALOX12B	HGNC	ENSG00000179477	tier1	-	-	56	0	0.00	48	4	7.69
AMER1	0	genome.wustl.edu	37	X	63410680	63410680	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	X	63410680	63410680	G	T	SNP	AMER1	ENST00000330258	human	ensembl	74_37	-1	known	missense	c.2487	p.H829Q	1.000	NULL	pfam_Uncharacterised_FAM123	-	no_errors	AMER1	HGNC	ENSG00000184675	tier1	-	-	28	0	0.00	21	3	12.50
AMZ2P1	0	genome.wustl.edu	37	17	62969486	62969486	+	RNA	SNP	A	A	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	62969486	62969486	A	T	SNP	AMZ2P1	ENST00000397713	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.988	-	-	-	no_errors	AMZ2P1	HGNC	ENSG00000214174	tier1	-	-	52	0	0.00	73	4	5.13
ANKRD11	0	genome.wustl.edu	37	16	89354973	89354973	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	16	89354973	89354973	G	A	SNP	ANKRD11	ENST00000301030	human	ensembl	74_37	-1	known	missense	c.707	p.T236M	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD11	HGNC	ENSG00000167522				39	0	0.00	33	2	5.71
ANKRD30A	0	genome.wustl.edu	37	10	37418838	37418838	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	10	37418838	37418838	C	A	SNP	ANKRD30A	ENST00000361713	human	ensembl	74_37	+1	known	missense	c.71	p.A24D	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30A	HGNC	ENSG00000148513	tier1	-	-	66	0	0.00	47	38	44.71
ANXA9	0	genome.wustl.edu	37	1	150960781	150960781	+	Silent	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	150960781	150960781	G	T	SNP	ANXA9	ENST00000368947	human	ensembl	74_37	+1	known	silent	c.816	p.P272	0.553	NULL	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinXXXI	-	no_errors	ANXA9	HGNC	ENSG00000143412				40	0	0.00	32	2	5.88
AOC3	0	genome.wustl.edu	37	17	41003593	41003593	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	41003593	41003593	G	A	SNP	AOC3	ENST00000308423	human	ensembl	74_37	+1	known	missense	c.233	p.R78Q	0.045	pfam_Cu_amine_oxidase_N2,superfamily_Cu_amine_oxidase_N-reg	pfam_Cu_amine_oxidase_C,pfam_Cu_amine_oxidase_N2,pfam_Cu_amine_oxidase_N3,superfamily_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	-	no_errors	AOC3	HGNC	ENSG00000131471				49	0	0.00	19	16	45.71
APOH	0	genome.wustl.edu	37	17	64224243	64224243	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	64224243	64224243	C	T	SNP	APOH	ENST00000205948	human	ensembl	74_37	-1	known	missense	c.136	p.E46K	0.794	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_Sushi_2,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	APOH	HGNC	ENSG00000091583	tier1	-	-	52	0	0.00	36	14	28.00
ARAP1	0	genome.wustl.edu	37	11	72438099	72438099	+	Silent	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	72438099	72438099	C	A	SNP	ARAP1	ENST00000393609	human	ensembl	74_37	-1	known	silent	c.75	p.G25	0.877	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_Ras-assoc,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP1	HGNC	ENSG00000186635	tier1	-	-	75	0	0.00	317	51	13.82
ARID1B	0	genome.wustl.edu	37	6	157528847	157528847	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	6	157528847	157528847	G	A	SNP	ARID1B	ENST00000367148	human	ensembl	74_37	+1	known	missense	c.6692	p.S2231N	1.000	pfam_DUF3518,superfamily_ARM-type_fold	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1B	HGNC	ENSG00000049618	tier1	-	-	46	0	0.00	49	4	7.55
ARSJ	0	genome.wustl.edu	37	4	114823556	114823556	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	4	114823556	114823556	T	G	SNP	ARSJ	ENST00000315366	human	ensembl	74_37	-1	known	missense	c.1674	p.E558D	0.003	NULL	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSJ	HGNC	ENSG00000180801	tier1	-	-	45	0	0.00	7	17	70.83
ASPHD2	0	genome.wustl.edu	37	22	26829738	26829738	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	22	26829738	26829738	G	A	SNP	ASPHD2	ENST00000215906	human	ensembl	74_37	+1	known	missense	c.157	p.V53M	0.889	NULL	pfam_Asp_Arg_b-Hydrxlase	-	no_errors	ASPHD2	HGNC	ENSG00000128203	tier1	rs140657637	-	36	0	0.00	4	14	77.78
ASXL3	0	genome.wustl.edu	37	18	31325070	31325070	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	18	31325070	31325070	T	C	SNP	ASXL3	ENST00000269197	human	ensembl	74_37	+1	known	missense	c.5258	p.L1753S	0.748	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL3	HGNC	ENSG00000141431	tier1	-	-	20	0	0.00	7	5	41.67
ATP13A5	0	genome.wustl.edu	37	3	193081988	193081988	+	Silent	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	193081988	193081988	G	A	SNP	ATP13A5	ENST00000342358	human	ensembl	74_37	-1	known	silent	c.145	p.L49	0.209	pfam_ATPase_P-typ_Cation_typ_V,tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_ATPase_P-typ_cation-transptr_N,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A5	HGNC	ENSG00000187527				43	0	0.00	62	4	6.06
ATP8A1	0	genome.wustl.edu	37	4	42526846	42526846	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	4	42526846	42526846	G	A	SNP	ATP8A1	ENST00000381668	human	ensembl	74_37	-1	known	nonsense	c.1741	p.R581*	1.000	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8A1	HGNC	ENSG00000124406	tier1	-	-	111	0	0.00	84	30	26.09
ATXN7L2	0	genome.wustl.edu	37	1	110029160	110029160	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	110029160	110029160	G	C	SNP	ATXN7L2	ENST00000369870	human	ensembl	74_37	+1	known	missense	c.226	p.D76H	1.000	NULL	pfam_SCA7_dom	-	no_errors	ATXN7L2	HGNC	ENSG00000162650				29	0	0.00	20	3	13.04
BICD2	0	genome.wustl.edu	37	9	95481023	95481023	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	9	95481023	95481023	C	T	SNP	BICD2	ENST00000356884	human	ensembl	74_37	-1	known	missense	c.1904	p.R635H	0.996	pfam_Bicaudal-D_microtubule-assoc	pfam_Bicaudal-D_microtubule-assoc	-	no_errors	BICD2	HGNC	ENSG00000185963				49	0	0.00	27	2	6.90
BMPER	0	genome.wustl.edu	37	7	34118668	34118668	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	7	34118668	34118668	C	T	SNP	BMPER	ENST00000297161	human	ensembl	74_37	+1	known	silent	c.1278	p.G426	0.115	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_VWF_C,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_C,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,pfscan_VWF_C	-	no_errors	BMPER	HGNC	ENSG00000164619	tier1	-	-	47	0	0.00	19	22	53.66
BRCA2	0	genome.wustl.edu	37	13	32912267	32912267	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	13	32912267	32912267	A	C	SNP	BRCA2	ENST00000380152	human	ensembl	74_37	+1	known	missense	c.3775	p.S1259R	0.004	pirsf_BRCA2	pfam_DNA_recomb/repair_BRCA2_hlx,pfam_BRCA2_repeat,pfam_BRCA2_OB_3,pfam_BRCA2_OB_1,pfam_Tower,superfamily_DNA_recomb/repair_BRCA2_hlx,superfamily_NA-bd_OB-fold,pirsf_BRCA2,pfscan_BRCA2_repeat	-	no_errors	BRCA2	HGNC	ENSG00000139618	tier1	-	-	18	0	0.00	29	8	21.62
BRD4	0	genome.wustl.edu	37	19	15378297	15378297	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	15378297	15378297	C	A	SNP	BRD4	ENST00000263377	human	ensembl	74_37	-1	known	missense	c.489	p.E163D	1.000	superfamily_Bromodomain,smart_Bromodomain	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD4	HGNC	ENSG00000141867	tier1	-	-	45	0	0.00	40	4	9.09
BRINP3	0	genome.wustl.edu	37	1	190195440	190195440	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	190195440	190195440	C	-	DEL	BRINP3	ENST00000367462	human	ensembl	74_37	-1	known	frame_shift_del	c.733	p.V245fs	1.000	smart_MACPF	pfam_MACPF,smart_MACPF	-	no_errors	BRINP3	HGNC	ENSG00000162670	tier1			43	0	0.00	23	6	20.69
BRIP1	0	genome.wustl.edu	37	17	59760671	59760671	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	59760671	59760671	G	T	SNP	BRIP1	ENST00000259008	human	ensembl	74_37	-1	known	missense	c.3736	p.P1246T	0.018	NULL	pfam_DEAD_2,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_TIL_dom,smart_Helicase-like_DEXD_c2,smart_Helicase_ATP-bd,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	BRIP1	HGNC	ENSG00000136492				43	0	0.00	45	3	6.25
BTAF1	0	genome.wustl.edu	37	10	93740298	93740298	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	10	93740298	93740298	C	A	SNP	BTAF1	ENST00000265990	human	ensembl	74_37	+1	known	missense	c.1738	p.L580M	1.000	superfamily_ARM-type_fold	pfam_DUF3535,pfam_SNF2_N,pfam_HEAT,pfam_Helicase_C,superfamily_ARM-type_fold,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	BTAF1	HGNC	ENSG00000095564	tier1	-	-	53	0	0.00	60	15	20.00
C11orf16	0	genome.wustl.edu	37	11	8951033	8951033	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	8951033	8951033	T	C	SNP	C11orf16	ENST00000326053	human	ensembl	74_37	-1	known	missense	c.215	p.Q72R	0.053	NULL	NULL	-	no_errors	C11orf16	HGNC	ENSG00000176029				52	0	0.00	75	4	5.06
C16orf82	0	genome.wustl.edu	37	16	27078105	27078105	+	RNA	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	16	27078105	27078105	C	A	SNP	C16orf82	ENST00000505035	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C16orf82	HGNC	ENSG00000234186	tier1	-	-	44	0	0.00	29	34	53.97
C17orf75	0	genome.wustl.edu	37	17	30665254	30665254	+	Nonsense_Mutation	SNP	A	A	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	30665254	30665254	A	T	SNP	C17orf75	ENST00000225805	human	ensembl	74_37	-1	known	nonsense	c.464	p.L155*	1.000	NULL	NULL	-	no_errors	C17orf75	HGNC	ENSG00000108666	tier1	-	-	48	0	0.00	54	4	6.90
C19orf44	0	genome.wustl.edu	37	19	16611880	16611880	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	16611880	16611880	G	A	SNP	C19orf44	ENST00000221671	human	ensembl	74_37	+1	known	missense	c.277	p.A93T	0.019	NULL	NULL	-	no_errors	C19orf44	HGNC	ENSG00000105072	tier1	-	-	69	0	0.00	62	4	6.06
C1orf63	0	genome.wustl.edu	37	1	25571794	25571795	+	Splice_Site	INS	-	-	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	25571794	25571795	-	A	INS	C1orf63	ENST00000417642	human	ensembl	74_37	-1	known	splice_site_ins	c.500-3_500-2	e2-2	0.972:0.056	-	-	-	no_errors	C1orf63	HGNC	ENSG00000117616	tier1			30	0	0.00	28	5	15.15
C20orf112	0	genome.wustl.edu	37	20	31099209	31099209	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	20	31099209	31099209	G	A	SNP	C20orf112	ENST00000201961	human	ensembl	74_37	-1	known	missense	c.358	p.P120S	1.000	NULL	NULL	-	no_errors	C20orf112	HGNC	ENSG00000197183	tier1	-	-	41	0	0.00	92	5	5.15
C2orf81	0	genome.wustl.edu	37	2	74642950	74642950	+	Silent	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	74642950	74642950	G	A	SNP	C2orf81	ENST00000290390	human	ensembl	74_37	-1	known	silent	c.363	p.P121	0.943	NULL	NULL	-	no_errors	C2orf81	HGNC	ENSG00000159239	tier1	-	-	25	0	0.00	25	14	35.90
C5orf22	0	genome.wustl.edu	37	5	31535892	31535892	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	5	31535892	31535892	C	T	SNP	C5orf22	ENST00000325366	human	ensembl	74_37	+1	known	missense	c.269	p.A90V	1.000	NULL	superfamily_ICAT	-	no_errors	C5orf22	HGNC	ENSG00000082213	tier1	-	-	44	0	0.00	46	4	8.00
CAB39L	0	genome.wustl.edu	37	13	49951208	49951208	+	Silent	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	13	49951208	49951208	G	A	SNP	CAB39L	ENST00000347776	human	ensembl	74_37	-1	known	silent	c.171	p.N57	0.557	pfam_Mo25,superfamily_ARM-type_fold	pfam_Mo25,superfamily_ARM-type_fold	-	no_errors	CAB39L	HGNC	ENSG00000102547				43	0	0.00	48	3	5.88
CACNA1E	0	genome.wustl.edu	37	1	181680102	181680103	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	181680102	181680103	AG	-	DEL	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	frame_shift_del	c.1068_1069	p.R360fs	1.000:1.000	prints_VDCCAlpha1	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	tier1			35	0	0.00	22	2	8.33
CACNA1F	0	genome.wustl.edu	37	X	49063212	49063212	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	X	49063212	49063212	C	T	SNP	CACNA1F	ENST00000376265	human	ensembl	74_37	-1	known	missense	c.5369	p.R1790H	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1F	HGNC	ENSG00000102001	tier1	-	-	46	0	0.00	45	4	8.16
CADPS	0	genome.wustl.edu	37	3	62631400	62631400	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	62631400	62631400	G	T	SNP	CADPS	ENST00000383710	human	ensembl	74_37	-1	known	missense	c.1322	p.P441Q	1.000	superfamily_C2_dom	pfam_Ca-dep_secretion_activator,superfamily_C2_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	CADPS	HGNC	ENSG00000163618	tier1	-	-	79	0	0.00	40	16	28.57
CCDC42	0	genome.wustl.edu	37	17	8638852	8638852	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	8638852	8638852	C	T	SNP	CCDC42	ENST00000293845	human	ensembl	74_37	-1	known	silent	c.570	p.Q190	1.000	NULL	NULL	-	no_errors	CCDC42	HGNC	ENSG00000161973	tier1	-	-	15	0	0.00	15	4	21.05
CCDC74A	0	genome.wustl.edu	37	2	132287585	132287585	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	132287585	132287585	C	G	SNP	CCDC74A	ENST00000467992	human	ensembl	74_37	+1	known	missense	c.35	p.A12G	0.004	NULL	NULL	-	no_errors	CCDC74A	HGNC	ENSG00000163040	tier1	-	-	55	0	0.00	39	18	31.03
CCHCR1	0	genome.wustl.edu	37	6	31112472	31112472	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	6	31112472	31112472	G	A	SNP	CCHCR1	ENST00000396268	human	ensembl	74_37	-1	known	missense	c.2159	p.A720V	0.770	pfam_HCR	pfam_HCR	-	no_errors	CCHCR1	HGNC	ENSG00000204536				59	0	0.00	69	4	5.48
CCHCR1	0	genome.wustl.edu	37	6	31112959	31112959	+	Silent	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	6	31112959	31112959	G	A	SNP	CCHCR1	ENST00000396268	human	ensembl	74_37	-1	known	silent	c.1860	p.G620	1.000	pfam_HCR	pfam_HCR	-	no_errors	CCHCR1	HGNC	ENSG00000204536				56	0	0.00	66	4	5.71
CD80	0	genome.wustl.edu	37	3	119263521	119263521	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	119263521	119263521	G	T	SNP	CD80	ENST00000264246	human	ensembl	74_37	-1	known	missense	c.294	p.N98K	0.929	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_C1-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	CD80	HGNC	ENSG00000121594	tier1	-	-	38	0	0.00	43	5	10.42
CDH26	0	genome.wustl.edu	37	20	58567452	58567452	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	20	58567452	58567452	C	T	SNP	CDH26	ENST00000244047	human	ensembl	74_37	+1	known	missense	c.1303	p.P435S	0.774	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH26	HGNC	ENSG00000124215	tier1	-	-	52	0	0.00	126	21	14.19
CDK11B	0	genome.wustl.edu	37	1	1586825	1586825	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	1586825	1586825	G	T	SNP	CDK11B	ENST00000407249	human	ensembl	74_37	-1	known	missense	c.225	p.D75E	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK11B	HGNC	ENSG00000248333	tier1	-	-	57	0	0.00	53	4	7.02
CELA3A	0	genome.wustl.edu	37	1	22333434	22333434	+	Silent	SNP	C	C	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	22333434	22333434	C	G	SNP	CELA3A	ENST00000290122	human	ensembl	74_37	+1	known	silent	c.426	p.A142	0.161	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CELA3A	HGNC	ENSG00000142789	tier1	-	-	60	0	0.00	55	7	11.29
CELSR1	0	genome.wustl.edu	37	22	46785357	46785357	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	22	46785357	46785357	C	T	SNP	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	missense	c.6385	p.A2129T	0.224	pfam_DUF3497	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275				42	0	0.00	34	2	5.56
CFHR2	0	genome.wustl.edu	37	1	196928128	196928128	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	196928128	196928128	G	T	SNP	CFHR2	ENST00000367415	human	ensembl	74_37	+1	known	missense	c.731	p.G244V	0.844	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFHR2	HGNC	ENSG00000080910				24	0	0.00	28	2	6.67
CHD7	0	genome.wustl.edu	37	8	61761705	61761705	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	8	61761705	61761705	T	C	SNP	CHD7	ENST00000423902	human	ensembl	74_37	+1	known	missense	c.5396	p.F1799S	1.000	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD7	HGNC	ENSG00000171316				42	0	0.00	38	2	5.00
CHRM2	0	genome.wustl.edu	37	7	136700814	136700814	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	7	136700814	136700814	C	T	SNP	CHRM2	ENST00000320658	human	ensembl	74_37	+1	known	missense	c.1202	p.A401V	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M2_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM2	HGNC	ENSG00000181072	tier1	-	-	38	0	0.00	22	6	21.43
CIC	0	genome.wustl.edu	37	19	42796302	42796302	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	42796302	42796302	C	T	SNP	CIC	ENST00000575354	human	ensembl	74_37	+1	known	missense	c.2951	p.A984V	0.986	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	CIC	HGNC	ENSG00000079432	tier1	-	-	84	0	0.00	45	4	8.16
CNNM2	0	genome.wustl.edu	37	10	104816695	104816695	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	10	104816695	104816695	G	A	SNP	CNNM2	ENST00000369878	human	ensembl	74_37	+1	known	missense	c.2047	p.V683I	1.000	superfamily_cNMP-bd-like	pfam_DUF21,superfamily_cNMP-bd-like	-	no_errors	CNNM2	HGNC	ENSG00000148842	tier1	-	-	48	0	0.00	43	9	17.31
COL14A1	0	genome.wustl.edu	37	8	121293235	121293235	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	8	121293235	121293235	G	C	SNP	COL14A1	ENST00000297848	human	ensembl	74_37	+1	known	missense	c.3761	p.G1254A	1.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_VWF_A,pfam_Fibronectin_type3,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL14A1	HGNC	ENSG00000187955	tier1	-	-	79	0	0.00	76	6	7.14
COL4A3BP	0	genome.wustl.edu	37	5	74722305	74722306	+	Splice_Site	INS	-	-	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	5	74722305	74722306	-	A	INS	COL4A3BP	ENST00000380494	human	ensembl	74_37	-1	known	splice_site_ins	c.733-3_733-2	e5-2	1.000:0.996	-	-	-	no_errors	COL4A3BP	HGNC	ENSG00000113163	tier1			34	0	0.00	35	3	7.89
COL5A3	0	genome.wustl.edu	37	19	10077032	10077032	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	10077032	10077032	C	T	SNP	COL5A3	ENST00000264828	human	ensembl	74_37	-1	known	silent	c.4740	p.A1580	0.032	pfam_Fib_collagen_C,smart_Fib_collagen_C	pfam_Collagen,pfam_Fib_collagen_C,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A3	HGNC	ENSG00000080573	tier1	-	-	52	0	0.00	44	9	16.98
COPB1	0	genome.wustl.edu	37	11	14501200	14501200	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	14501200	14501200	G	T	SNP	COPB1	ENST00000249923	human	ensembl	74_37	-1	known	missense	c.1273	p.R425S	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_COPB1	pfam_Coatomer_bsu_C,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_COPB1	-	no_errors	COPB1	HGNC	ENSG00000129083				32	0	0.00	49	3	5.66
CPZ	0	genome.wustl.edu	37	4	8621087	8621087	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	4	8621087	8621087	C	G	SNP	CPZ	ENST00000360986	human	ensembl	74_37	+1	known	missense	c.1702	p.P568A	1.000	superfamily_CarboxyPept-like_regulatory,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Frizzled_dom,superfamily_Frizzled_dom,superfamily_CarboxyPept-like_regulatory,smart_Frizzled_dom,smart_Peptidase_M14,prints_Peptidase_M14,pfscan_Frizzled_dom	-	no_errors	CPZ	HGNC	ENSG00000109625	tier1	-	-	51	0	0.00	34	8	19.05
CRBN	0	genome.wustl.edu	37	3	3192657	3192657	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	3192657	3192657	T	-	DEL	CRBN	ENST00000231948	human	ensembl	74_37	-1	known	frame_shift_del	c.1221	p.D408fs	1.000	NULL	pfam_Pept_S16_N,superfamily_PUA-like_domain,smart_Pept_S16_N	-	no_errors	CRBN	HGNC	ENSG00000113851	tier1			39	0	0.00	28	3	9.68
CRYBG3	0	genome.wustl.edu	37	3	97617780	97617780	+	Silent	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	97617780	97617780	G	A	SNP	CRYBG3	ENST00000182096	human	ensembl	74_37	+1	known	silent	c.1911	p.K637	0.998	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,pfam_Ricin_B_lectin,superfamily_G_crystallin-rel,superfamily_Ricin_B_lectin,smart_Beta/gamma_crystallin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBG3	HGNC	ENSG00000080200	tier1	-	-	40	0	0.00	22	29	56.86
CRYGB	0	genome.wustl.edu	37	2	209007444	209007444	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	209007444	209007444	G	A	SNP	CRYGB	ENST00000260988	human	ensembl	74_37	-1	known	missense	c.446	p.P149L	0.996	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,prints_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,prints_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin	-	no_errors	CRYGB	HGNC	ENSG00000182187	tier1	-	-	55	0	0.00	42	22	34.38
CYP4F2	0	genome.wustl.edu	37	19	15989681	15989681	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	15989681	15989681	C	T	SNP	CYP4F2	ENST00000221700	human	ensembl	74_37	-1	known	missense	c.1463	p.R488H	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F2	HGNC	ENSG00000186115	tier1	-	-	130	0	0.00	80	25	23.81
DAPK2	0	genome.wustl.edu	37	15	64275784	64275784	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	15	64275784	64275784	T	C	SNP	DAPK2	ENST00000261891	human	ensembl	74_37	-1	known	missense	c.262	p.T88A	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	DAPK2	HGNC	ENSG00000035664	tier1	-	-	68	0	0.00	53	4	7.02
DBX1	0	genome.wustl.edu	37	11	20181682	20181682	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	20181682	20181682	C	T	SNP	DBX1	ENST00000227256	human	ensembl	74_37	-1	known	missense	c.189	p.M63I	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	DBX1	HGNC	ENSG00000109851	tier1	-	-	19	0	0.00	11	5	31.25
DCP2	0	genome.wustl.edu	37	5	112346477	112346477	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	5	112346477	112346477	C	T	SNP	DCP2	ENST00000389063	human	ensembl	74_37	+1	known	missense	c.1072	p.R358W	1.000	NULL	pfam_mRNA_decapping_BoxA,pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	DCP2	HGNC	ENSG00000172795	tier1	-	-	53	0	0.00	29	25	46.30
DIDO1	0	genome.wustl.edu	37	20	61511438	61511438	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	20	61511438	61511438	G	A	SNP	DIDO1	ENST00000266070	human	ensembl	74_37	-1	known	missense	c.5870	p.P1957L	0.251	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	DIDO1	HGNC	ENSG00000101191				28	0	0.00	73	8	9.88
DLG2	0	genome.wustl.edu	37	11	83877955	83877956	+	RNA	INS	-	-	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	83877955	83877956	-	T	INS	DLG2	ENST00000524941	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	DLG2	HGNC	ENSG00000150672	tier1			47	0	0.00	30	2	6.25
DNAH12	0	genome.wustl.edu	37	3	57348623	57348623	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	57348623	57348623	G	A	SNP	DNAH12	ENST00000351747	human	ensembl	74_37	-1	known	missense	c.7957	p.H2653Y	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH12	HGNC	ENSG00000174844				39	0	0.00	27	2	6.90
DNAH6	0	genome.wustl.edu	37	2	84940368	84940368	+	Silent	SNP	C	C	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	84940368	84940368	C	G	SNP	DNAH6	ENST00000237449	human	ensembl	74_37	+1	known	silent	c.9528	p.P3176	0.935	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH6	HGNC	ENSG00000115423	tier1	-	-	79	0	0.00	75	4	5.06
DNASE1L3	0	genome.wustl.edu	37	3	58178417	58178417	+	Silent	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	58178417	58178417	G	T	SNP	DNASE1L3	ENST00000318316	human	ensembl	74_37	-1	known	silent	c.915	p.S305	0.834	NULL	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_DNase_I,pirsf_DNase_I,prints_DNase_I	-	no_errors	DNASE1L3	HGNC	ENSG00000163687				39	0	0.00	32	4	10.81
DOCK10	0	genome.wustl.edu	37	2	225657770	225657770	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	225657770	225657770	C	G	SNP	DOCK10	ENST00000258390	human	ensembl	74_37	-1	known	missense	c.5232	p.K1744N	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK10	HGNC	ENSG00000135905				37	0	0.00	44	3	6.38
DOCK3	0	genome.wustl.edu	37	3	51349978	51349978	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	51349978	51349978	C	T	SNP	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	silent	c.3165	p.T1055	0.812	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538	tier1	-	-	54	0	0.00	35	8	18.60
DTNA	0	genome.wustl.edu	37	18	32395957	32395957	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	18	32395957	32395957	C	T	SNP	DTNA	ENST00000269190	human	ensembl	74_37	+1	known	nonsense	c.688	p.R230*	1.000	pfam_EF-hand_dom_typ2,pirsf_Distrobrevin	pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_Znf_ZZ,smart_Znf_ZZ,pirsf_Distrobrevin,pfscan_Znf_ZZ	-	no_errors	DTNA	HGNC	ENSG00000134769	tier1	-	-	75	0	0.00	39	18	31.58
DUSP12	0	genome.wustl.edu	37	1	161719720	161719720	+	Silent	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	161719720	161719720	G	T	SNP	DUSP12	ENST00000367943	human	ensembl	74_37	+1	known	silent	c.129	p.A43	0.127	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_DUSP12,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_DUSP12,pfscan_Znf_C2H2,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	DUSP12	HGNC	ENSG00000081721				63	0	0.00	75	4	5.06
DUSP12	0	genome.wustl.edu	37	1	161721524	161721524	+	Silent	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	161721524	161721524	C	A	SNP	DUSP12	ENST00000367943	human	ensembl	74_37	+1	known	silent	c.411	p.P137	0.982	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_DUSP12,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_DUSP12,pfscan_Znf_C2H2,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	DUSP12	HGNC	ENSG00000081721				45	0	0.00	36	2	5.26
DYNC1LI1	0	genome.wustl.edu	37	3	32578524	32578524	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	32578524	32578524	T	C	SNP	DYNC1LI1	ENST00000273130	human	ensembl	74_37	-1	known	missense	c.811	p.I271V	1.000	pfam_Dynein_light_int_chain,superfamily_P-loop_NTPase	pfam_Dynein_light_int_chain,superfamily_P-loop_NTPase	-	no_errors	DYNC1LI1	HGNC	ENSG00000144635	tier1	-	-	71	0	0.00	24	35	59.32
ECT2	0	genome.wustl.edu	37	3	172520673	172520673	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	172520673	172520673	G	T	SNP	ECT2	ENST00000427830	human	ensembl	74_37	+1	known	missense	c.1916	p.R639L	1.000	NULL	pfam_DH-domain,pfam_BRCT_dom,superfamily_DH-domain,superfamily_BRCT_dom,smart_BRCT_dom,smart_DH-domain,pfscan_BRCT_dom,pfscan_DH-domain	-	no_errors	ECT2	HGNC	ENSG00000114346				48	0	0.00	55	3	5.17
EFCAB12	0	genome.wustl.edu	37	3	129127513	129127513	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	129127513	129127513	C	T	SNP	EFCAB12	ENST00000326085	human	ensembl	74_37	-1	known	silent	c.1224	p.P408	0.985	NULL	pfscan_EF_hand_dom	-	no_errors	EFCAB12	HGNC	ENSG00000172771				43	0	0.00	52	3	5.45
EFS	0	genome.wustl.edu	37	14	23829784	23829784	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	14	23829784	23829784	G	T	SNP	EFS	ENST00000216733	human	ensembl	74_37	-1	known	missense	c.277	p.H93N	0.016	superfamily_SH3_domain	pfam_CAS_DUF3513,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	EFS	HGNC	ENSG00000100842				98	0	0.00	73	4	5.19
EIF4H	0	genome.wustl.edu	37	7	73604164	73604164	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	7	73604164	73604164	C	T	SNP	EIF4H	ENST00000265753	human	ensembl	74_37	+1	known	missense	c.325	p.R109W	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	EIF4H	HGNC	ENSG00000106682				52	0	0.00	69	5	6.76
ENSG00000225411	0	genome.wustl.edu	37	9	68400475	68400475	+	RNA	SNP	T	T	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	9	68400475	68400475	T	G	SNP	ENSG00000225411	ENST00000417843	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	RP11-764K9.1	Clone_based_vega_gene	ENSG00000225411	tier1	rs75317582	-	28	0	0.00	23	4	14.81
ENSG00000235999	0	genome.wustl.edu	37	1	149287967	149287967	+	RNA	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	149287967	149287967	G	A	SNP	ENSG00000235999	ENST00000433084	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-403I13.8	Clone_based_vega_gene	ENSG00000235999	tier1	-	-	191	0	0.00	231	14	5.69
ENSG00000261037	0	genome.wustl.edu	37	5	6020309	6020309	+	RNA	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	5	6020309	6020309	G	T	SNP	ENSG00000261037	ENST00000564741	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTC-471C19.1	Clone_based_vega_gene	ENSG00000261037	tier1	-	-	24	0	0.00	16	6	27.27
ENSG00000261346	0	genome.wustl.edu	37	16	30500480	30500480	+	RNA	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	16	30500480	30500480	C	T	SNP	ENSG00000261346	ENST00000569459	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-297C4.2	Clone_based_vega_gene	ENSG00000261346	tier1	-	-	49	0	0.00	37	4	9.76
EPHA10	0	genome.wustl.edu	37	1	38185090	38185090	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	38185090	38185090	G	T	SNP	EPHA10	ENST00000427468	human	ensembl	74_37	-1	known	missense	c.2752	p.P918T	1.000	pirsf_Tyr_kinase_ephrin_rcpt,superfamily_Kinase-like_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_SAM/pointed,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA10	HGNC	ENSG00000183317				20	0	0.00	31	4	11.43
ERVW-1	0	genome.wustl.edu	37	7	92099506	92099506	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	7	92099506	92099506	C	A	SNP	ERVW-1	ENST00000493463	human	ensembl	74_37	-1	known	missense	c.190	p.A64S	0.421	NULL	pfam_TLV/ENV_coat_polyprotein	-	no_errors	ERVW-1	HGNC	ENSG00000242950				19	0	0.00	190	11	5.45
EXTL3	0	genome.wustl.edu	37	8	28608307	28608307	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	8	28608307	28608307	C	T	SNP	EXTL3	ENST00000220562	human	ensembl	74_37	+1	known	missense	c.2684	p.T895M	1.000	pfam_HexNAc_Trfase_a	pfam_HexNAc_Trfase_a,pfam_Exostosin	-	no_errors	EXTL3	HGNC	ENSG00000012232				32	0	0.00	24	2	7.69
FAM154B	0	genome.wustl.edu	37	15	82575497	82575498	+	RNA	INS	-	-	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	15	82575497	82575498	-	T	INS	FAM154B	ENST00000565501	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	FAM154B	HGNC	ENSG00000188659	tier1			23	0	0.00	14	2	12.50
FAM194A	0	genome.wustl.edu	37	3	150396288	150396288	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	150396288	150396288	T	C	SNP	FAM194A	ENST00000295910	human	ensembl	74_37	-1	known	missense	c.1165	p.K389E	0.000	NULL	NULL	-	no_errors	FAM194A	HGNC	ENSG00000163645	tier1	-	-	28	0	0.00	48	7	12.73
FAM205A	0	genome.wustl.edu	37	9	34723557	34723557	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	9	34723557	34723557	T	C	SNP	FAM205A	ENST00000378788	human	ensembl	74_37	-1	novel	missense	c.3680	p.K1227R	0.024	NULL	NULL	-	no_errors	FAM205A	HGNC	ENSG00000205108				44	0	0.00	43	3	6.52
FAM219B	0	genome.wustl.edu	37	15	75198407	75198407	+	RNA	SNP	A	A	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	15	75198407	75198407	A	G	SNP	FAM219B	ENST00000563706	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	FAM219B	HGNC	ENSG00000178761	tier1	-	-	11	0	0.00	2	4	66.67
FARP2	0	genome.wustl.edu	37	2	242343285	242343285	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	242343285	242343285	C	T	SNP	FARP2	ENST00000264042	human	ensembl	74_37	+1	known	missense	c.226	p.R76C	0.060	pfam_FERM_N,smart_Band_41_domain,pfscan_FERM_domain,prints_Ez/rad/moesin_like	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_FERM-adjacent,superfamily_DH-domain,superfamily_FERM_central,smart_Band_41_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_FERM_domain,pfscan_Pleckstrin_homology,pfscan_DH-domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FARP2	HGNC	ENSG00000006607				39	0	0.00	51	3	5.56
FBN2	0	genome.wustl.edu	37	5	127674677	127674677	+	Silent	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	5	127674677	127674677	G	A	SNP	FBN2	ENST00000262464	human	ensembl	74_37	-1	known	silent	c.3420	p.C1140	0.867	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829	tier1	-	-	21	0	0.00	33	8	19.51
FBXO7	0	genome.wustl.edu	37	22	32889257	32889257	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	22	32889257	32889257	G	C	SNP	FBXO7	ENST00000266087	human	ensembl	74_37	+1	known	missense	c.1133	p.R378P	1.000	superfamily_F-box_dom	pfam_FP_dom,pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO7	HGNC	ENSG00000100225	tier1	-	-	56	0	0.00	29	26	47.27
FCRLA	0	genome.wustl.edu	37	1	161680413	161680414	+	RNA	INS	-	-	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	161680413	161680414	-	A	INS	FCRLA	ENST00000470841	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.001	-	-	-	no_errors	FCRLA	HGNC	ENSG00000132185	tier1			29	0	0.00	26	5	16.13
FGGY	0	genome.wustl.edu	37	1	60073514	60073514	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	60073514	60073514	C	A	SNP	FGGY	ENST00000303721	human	ensembl	74_37	+1	known	missense	c.943	p.P315T	1.000	pfam_Carb_kinase_FGGY_C,tigrfam_Carb_kinase_FGGY-rel	pfam_Carb_kinase_FGGY_C,pfam_Carb_kinase_FGGY_N,tigrfam_Carb_kinase_FGGY-rel	-	no_errors	FGGY	HGNC	ENSG00000172456	tier1	-	-	74	0	0.00	45	34	43.04
FIGN	0	genome.wustl.edu	37	2	164467538	164467538	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	164467538	164467538	C	T	SNP	FIGN	ENST00000333129	human	ensembl	74_37	-1	known	silent	c.804	p.P268	0.948	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	FIGN	HGNC	ENSG00000182263	tier1	rs202236615	-	20	0	0.00	22	15	40.54
FLJ26850	0	genome.wustl.edu	37	19	50554114	50554114	+	RNA	SNP	T	T	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	50554114	50554114	T	G	SNP	FLJ26850	ENST00000527209	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.192	-	-	-	no_errors	CTD-2126E3.1	Clone_based_vega_gene	ENSG00000204666	tier1	-	-	80	0	0.00	62	4	6.06
FOXG1	0	genome.wustl.edu	37	14	29237633	29237633	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	14	29237633	29237633	C	T	SNP	FOXG1	ENST00000313071	human	ensembl	74_37	+1	known	missense	c.1148	p.A383V	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXG1	HGNC	ENSG00000176165	tier1	-	-	33	0	0.00	17	4	19.05
FREM3	0	genome.wustl.edu	37	4	144620576	144620576	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	4	144620576	144620576	G	A	SNP	FREM3	ENST00000329798	human	ensembl	74_37	-1	putative	missense	c.1253	p.P418L	0.499	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM3	HGNC	ENSG00000183090	tier1	-	-	79	0	0.00	75	18	19.35
FRG1B	0	genome.wustl.edu	37	20	29631566	29631566	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	20	29631566	29631566	A	C	SNP	FRG1B	ENST00000278882	human	ensembl	74_37	+1	known	missense	c.362	p.K121T	0.994	pfam_FRG1	pfam_FRG1,superfamily_Actin_cross-linking	-	no_errors	FRG1B	HGNC	ENSG00000149531				39	0	0.00	58	4	6.45
FRYL	0	genome.wustl.edu	37	4	48591842	48591842	+	Silent	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	4	48591842	48591842	T	C	SNP	FRYL	ENST00000358350	human	ensembl	74_37	-1	known	silent	c.1560	p.R520	0.929	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FRYL	HGNC	ENSG00000075539	tier1	-	-	60	0	0.00	31	15	32.61
FTSJ3	0	genome.wustl.edu	37	17	61899383	61899383	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	61899383	61899383	G	T	SNP	FTSJ3	ENST00000427159	human	ensembl	74_37	-1	known	missense	c.1436	p.A479E	1.000	NULL	pfam_rRNA_MeTfrase_Spb1_C,pfam_rRNA_MeTrfase_FtsJ_dom,pfam_rRNA_MeTfrase_Spb1_DUF3381	-	no_errors	FTSJ3	HGNC	ENSG00000108592	tier1	-	-	31	0	0.00	55	4	6.78
FYCO1	0	genome.wustl.edu	37	3	46016794	46016794	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	46016794	46016794	G	T	SNP	FYCO1	ENST00000535325	human	ensembl	74_37	-1	known	missense	c.332	p.S111Y	0.999	pfam_Run,pfscan_Run	pfam_Znf_FYVE,pfam_Run,superfamily_GOLD,superfamily_Znf_FYVE_PHD,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Znf_FYVE,pfscan_GOLD,pfscan_Run,pfscan_Znf_FYVE-rel	-	no_errors	FYCO1	HGNC	ENSG00000163820				56	0	0.00	50	3	5.66
GABRA6	0	genome.wustl.edu	37	5	161128522	161128522	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	5	161128522	161128522	C	T	SNP	GABRA6	ENST00000274545	human	ensembl	74_37	+1	known	missense	c.1105	p.H369Y	0.229	superfamily_Neurotrans-gated_channel_TM,prints_GABBAa6_rcpt	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa6_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA6	HGNC	ENSG00000145863				33	0	0.00	26	2	7.14
GBP7	0	genome.wustl.edu	37	1	89618084	89618084	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	89618084	89618084	C	T	SNP	GBP7	ENST00000294671	human	ensembl	74_37	-1	known	silent	c.492	p.E164	0.044	pfam_Guanylate-bd_N,superfamily_P-loop_NTPase	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP7	HGNC	ENSG00000213512	tier1	-	-	74	0	0.00	40	16	28.57
GNA13	0	genome.wustl.edu	37	17	63049657	63049657	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	63049657	63049657	A	G	SNP	GNA13	ENST00000439174	human	ensembl	74_37	-1	known	missense	c.473	p.I158T	1.000	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_12	-	no_errors	GNA13	HGNC	ENSG00000120063				39	0	0.00	36	3	7.69
GOLGA2P5	0	genome.wustl.edu	37	12	100561418	100561418	+	Splice_Site	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	100561418	100561418	C	A	SNP	GOLGA2P5	ENST00000421840	human	ensembl	74_37	-1	known	splice_site	c.NULL	NULL	0.827	-	-	-	no_errors	GOLGA2B	Clone_based_vega_gene	ENSG00000238105	tier1	-	-	79	0	0.00	66	4	5.71
GOLGB1	0	genome.wustl.edu	37	3	121410616	121410616	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	121410616	121410616	G	A	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	missense	c.7580	p.A2527V	1.000	NULL	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230				23	0	0.00	31	4	11.43
GPN1	0	genome.wustl.edu	37	2	27855528	27855528	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	27855528	27855528	A	T	SNP	GPN1	ENST00000264718	human	ensembl	74_37	+1	known	missense	c.383	p.N128I	1.000	pfam_Uncharacterised_ATP-bd,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Uncharacterised_ATP-bd,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	GPN1	HGNC	ENSG00000198522	tier1	-	-	69	0	0.00	54	4	6.90
GRM2	0	genome.wustl.edu	37	3	51749765	51749765	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	51749765	51749765	G	A	SNP	GRM2	ENST00000395052	human	ensembl	74_37	+1	known	missense	c.1976	p.R659H	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM2	HGNC	ENSG00000164082				25	0	0.00	25	2	7.41
GTPBP1	0	genome.wustl.edu	37	22	39112748	39112748	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	22	39112748	39112748	C	T	SNP	GTPBP1	ENST00000216044	human	ensembl	74_37	+1	known	missense	c.577	p.R193C	1.000	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_B-barrel	-	no_errors	GTPBP1	HGNC	ENSG00000100226	tier1	-	-	30	0	0.00	15	9	37.50
HECTD4	0	genome.wustl.edu	37	12	112757112	112757112	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	112757112	112757112	C	T	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	silent	c.180	p.E60	1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064	tier1	-	-	67	0	0.00	41	6	12.77
HLA-C	0	genome.wustl.edu	37	6	31239424	31239424	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	6	31239424	31239424	G	C	SNP	HLA-C	ENST00000383329	human	ensembl	74_37	-1	known	missense	c.295	p.R99G	0.005	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog,prints_MHC_I_a	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-C	HGNC	ENSG00000204525	tier1	rs41549514	-	125	0	0.00	113	20	15.04
HLA-DPB1	0	genome.wustl.edu	37	6	33048643	33048643	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	6	33048643	33048643	C	T	SNP	HLA-DPB1	ENST00000418931	human	ensembl	74_37	+1	known	missense	c.295	p.R99W	0.010	pfam_MHC_II_b_N,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N	pfam_MHC_II_b_N,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_b_N,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	HLA-DPB1	HGNC	ENSG00000223865	tier1	rs41554314	-	121	0	0.00	150	9	5.62
HNRNPKP3	0	genome.wustl.edu	37	11	43283301	43283301	+	RNA	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	43283301	43283301	T	C	SNP	HNRNPKP3	ENST00000511537	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HNRNPKP3	HGNC	ENSG00000251557				16	0	0.00	11	4	26.67
HOXB-AS3	0	genome.wustl.edu	37	17	46673330	46673331	+	RNA	INS	-	-	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	46673330	46673331	-	G	INS	HOXB-AS3	ENST00000460041	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998:0.997	-	-	-	no_errors	HOXB-AS3	HGNC	ENSG00000233101	tier1			69	0	0.00	44	9	16.98
HTR7	0	genome.wustl.edu	37	10	92509183	92509183	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	10	92509183	92509183	G	T	SNP	HTR7	ENST00000336152	human	ensembl	74_37	-1	known	missense	c.708	p.D236E	0.993	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT_7_rcpt,prints_GPCR_Rhodpsn,prints_Melcrt_ACTH_rcpt	-	no_errors	HTR7	HGNC	ENSG00000148680	tier1	-	-	37	0	0.00	55	5	8.33
HTRA1	0	genome.wustl.edu	37	10	124249032	124249032	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	10	124249032	124249032	A	G	SNP	HTRA1	ENST00000368984	human	ensembl	74_37	+1	known	missense	c.667	p.T223A	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,prints_Peptidase_S1C	pfam_Peptidase_S1,pfam_PDZ,pfam_Kazal_dom,pfam_IGFBP-like,superfamily_Trypsin-like_Pept_dom,superfamily_PDZ,smart_IGFBP-like,smart_Kazal_dom,smart_PDZ,pfscan_PDZ,prints_Peptidase_S1C	-	no_errors	HTRA1	HGNC	ENSG00000166033	tier1	-	-	53	0	0.00	50	9	15.25
IGSF10	0	genome.wustl.edu	37	3	151164323	151164323	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	151164323	151164323	G	A	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	missense	c.3446	p.S1149F	0.011	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580	tier1	-	-	73	0	0.00	70	31	30.69
IL12RB2	0	genome.wustl.edu	37	1	67792431	67792431	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	67792431	67792431	G	T	SNP	IL12RB2	ENST00000262345	human	ensembl	74_37	+1	known	missense	c.378	p.Q126H	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_IgC2-like_lig-bd,pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL12RB2	HGNC	ENSG00000081985	tier1	-	-	38	0	0.00	64	4	5.88
INADL	0	genome.wustl.edu	37	1	62579862	62579862	+	Silent	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	62579862	62579862	T	C	SNP	INADL	ENST00000371158	human	ensembl	74_37	+1	known	silent	c.4599	p.P1533	0.003	superfamily_PDZ,pfscan_PDZ	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_L27,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	INADL	HGNC	ENSG00000132849				70	0	0.00	60	4	6.15
INSR	0	genome.wustl.edu	37	19	7166284	7166284	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	7166284	7166284	C	T	SNP	INSR	ENST00000302850	human	ensembl	74_37	-1	known	missense	c.1742	p.R581Q	0.861	pirsf_Tyr_kinase_insulin-like_rcpt,superfamily_Fibronectin_type3,smart_Fibronectin_type3	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	INSR	HGNC	ENSG00000171105	tier1	-	-	42	0	0.00	22	5	18.52
INTS8	0	genome.wustl.edu	37	8	95850846	95850846	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	8	95850846	95850846	G	T	SNP	INTS8	ENST00000523731	human	ensembl	74_37	+1	known	missense	c.1017	p.Q339H	1.000	NULL	NULL	-	no_errors	INTS8	HGNC	ENSG00000164941				29	0	0.00	30	3	9.09
ITGAV	0	genome.wustl.edu	37	2	187529245	187529245	+	Silent	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	187529245	187529245	G	T	SNP	ITGAV	ENST00000261023	human	ensembl	74_37	+1	known	silent	c.1950	p.G650	0.997	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGAV	HGNC	ENSG00000138448	tier1	-	-	49	0	0.00	54	4	6.78
ITGAX	0	genome.wustl.edu	37	16	31390952	31390952	+	Silent	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	16	31390952	31390952	C	A	SNP	ITGAX	ENST00000268296	human	ensembl	74_37	+1	known	silent	c.2853	p.A951	0.000	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAX	HGNC	ENSG00000140678	tier1	-	-	47	0	0.00	52	14	21.21
IZUMO4	0	genome.wustl.edu	37	19	2098979	2098979	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	2098979	2098979	C	T	SNP	IZUMO4	ENST00000395301	human	ensembl	74_37	+1	known	missense	c.559	p.R187C	0.000	NULL	NULL	-	no_errors	IZUMO4	HGNC	ENSG00000099840	tier1	-	-	39	0	0.00	46	4	8.00
JAKMIP3	0	genome.wustl.edu	37	10	133930889	133930889	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	10	133930889	133930889	G	T	SNP	JAKMIP3	ENST00000298622	human	ensembl	74_37	+1	known	missense	c.444	p.E148D	0.984	NULL	NULL	-	no_errors	JAKMIP3	HGNC	ENSG00000188385	tier1	-	-	35	0	0.00	58	10	14.71
KAT6A	0	genome.wustl.edu	37	8	41838370	41838370	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	8	41838370	41838370	G	A	SNP	KAT6A	ENST00000265713	human	ensembl	74_37	-1	known	missense	c.901	p.P301S	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_MOZ_SAS,pfam_Znf_PHD-finger,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6A	HGNC	ENSG00000083168	tier1	-	-	56	0	0.00	36	4	10.00
KCNC3	0	genome.wustl.edu	37	19	50826458	50826458	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	50826458	50826458	C	T	SNP	KCNC3	ENST00000477616	human	ensembl	74_37	-1	known	silent	c.1752	p.P584	0.003	prints_K_chnl_volt-dep_Kv3.3	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_K_chnl_volt-dep_Kv3_ID,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3.3,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC3	HGNC	ENSG00000131398	tier1	-	-	22	0	0.00	15	7	31.82
KCTD1	0	genome.wustl.edu	37	18	24056534	24056534	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	18	24056534	24056534	C	G	SNP	KCTD1	ENST00000417602	human	ensembl	74_37	-1	known	missense	c.2078	p.R693T	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_DUF3504,pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD1	HGNC	ENSG00000134504				50	0	0.00	35	2	5.41
KDM4C	0	genome.wustl.edu	37	9	7011779	7011779	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	9	7011779	7011779	C	G	SNP	KDM4C	ENST00000381309	human	ensembl	74_37	+1	known	missense	c.1868	p.T623R	0.879	NULL	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,superfamily_Chorismate_mutase_type_II,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4C	HGNC	ENSG00000107077				59	0	0.00	31	2	6.06
KIAA1199	0	genome.wustl.edu	37	15	81201538	81201538	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	15	81201538	81201538	G	A	SNP	KIAA1199	ENST00000220244	human	ensembl	74_37	+1	known	missense	c.1688	p.G563D	0.998	superfamily_Pectin_lyase_fold/virulence	pfam_G8_domain,superfamily_Pectin_lyase_fold/virulence	-	no_errors	KIAA1199	HGNC	ENSG00000103888	tier1	-	-	54	0	0.00	63	10	13.70
KIAA2018	0	genome.wustl.edu	37	3	113378493	113378493	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	113378493	113378493	G	T	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	nonsense	c.2036	p.S679*	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542				43	0	0.00	50	3	5.66
KLF11	0	genome.wustl.edu	37	2	10192515	10192515	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	10192515	10192515	C	T	SNP	KLF11	ENST00000305883	human	ensembl	74_37	+1	known	missense	c.1420	p.R474W	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF11	HGNC	ENSG00000172059				17	0	0.00	21	2	8.70
KMT2E	0	genome.wustl.edu	37	7	104746087	104746087	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	7	104746087	104746087	G	A	SNP	KMT2E	ENST00000257745	human	ensembl	74_37	+1	known	missense	c.2398	p.E800K	1.000	NULL	pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_PHD-finger	-	no_errors	KMT2E	HGNC	ENSG00000005483				42	0	0.00	34	2	5.41
KRT27	0	genome.wustl.edu	37	17	38933254	38933254	+	Silent	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	38933254	38933254	G	A	SNP	KRT27	ENST00000301656	human	ensembl	74_37	-1	known	silent	c.1377	p.S459	0.773	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT27	HGNC	ENSG00000171446	tier1	-	-	63	0	0.00	15	27	64.29
KRTAP1-5	0	genome.wustl.edu	37	17	39183284	39183284	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	39183284	39183284	T	C	SNP	KRTAP1-5	ENST00000361883	human	ensembl	74_37	-1	known	missense	c.124	p.T42A	0.000	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP1-5	HGNC	ENSG00000221852	tier1	-	-	156	0	0.00	122	22	15.28
L3MBTL3	0	genome.wustl.edu	37	6	130415492	130415492	+	Silent	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	6	130415492	130415492	G	T	SNP	L3MBTL3	ENST00000361794	human	ensembl	74_37	+1	known	silent	c.1716	p.A572	0.015	NULL	pfam_Mbt,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt,pfscan_SAM	-	no_errors	L3MBTL3	HGNC	ENSG00000198945				50	0	0.00	55	4	6.78
LCT	0	genome.wustl.edu	37	2	136547232	136547232	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	136547232	136547232	G	-	DEL	LCT	ENST00000264162	human	ensembl	74_37	-1	known	frame_shift_del	c.5472	p.A1826fs	1.000	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850	tier1			46	0	0.00	30	2	6.25
LIMA1	0	genome.wustl.edu	37	12	50615967	50615967	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	50615967	50615967	G	A	SNP	LIMA1	ENST00000394943	human	ensembl	74_37	-1	known	missense	c.467	p.T156I	0.004	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LIMA1	HGNC	ENSG00000050405	tier1	-	-	61	0	0.00	70	4	5.41
LINGO2	0	genome.wustl.edu	37	9	27950045	27950045	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	9	27950045	27950045	T	C	SNP	LINGO2	ENST00000308675	human	ensembl	74_37	-1	known	missense	c.625	p.K209E	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Ig_V-set,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LINGO2	HGNC	ENSG00000174482	tier1	-	-	29	0	0.00	11	6	35.29
LOC100286922	0	genome.wustl.edu	37	2	234663738	234663738	+	RNA	SNP	A	A	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	234663738	234663738	A	T	SNP	LOC100286922	ENST00000389816	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.995	-	-	-	no_errors	AC114812.5	Clone_based_vega_gene	ENSG00000178836	tier1	-	-	77	0	0.00	46	10	17.86
LOC100286922	0	genome.wustl.edu	37	2	234663739	234663739	+	RNA	SNP	C	C	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	234663739	234663739	C	G	SNP	LOC100286922	ENST00000389816	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	AC114812.5	Clone_based_vega_gene	ENSG00000178836	tier1	-	-	75	0	0.00	46	10	17.86
LOC101928729	0	genome.wustl.edu	37	17	18284334	18284334	+	RNA	SNP	T	T	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	18284334	18284334	T	A	SNP	LOC101928729	ENST00000579352	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	RP1-37N7.1	Clone_based_vega_gene	ENSG00000264177	tier1	-	-	73	0	0.00	90	5	5.26
LOC645752	0	genome.wustl.edu	37	15	78211653	78211653	+	RNA	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	15	78211653	78211653	C	T	SNP	LOC645752	ENST00000567226	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	RP11-114H24.2	Clone_based_vega_gene	ENSG00000260776	tier1	-	-	174	0	0.00	71	100	58.14
LPHN3	0	genome.wustl.edu	37	4	62813888	62813888	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	4	62813888	62813888	G	T	SNP	LPHN3	ENST00000507625	human	ensembl	74_37	+1	known	missense	c.2699	p.W900L	1.000	pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN3	HGNC	ENSG00000150471	tier1	-	-	21	0	0.00	24	4	14.29
LRRK2	0	genome.wustl.edu	37	12	40634305	40634305	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	40634305	40634305	G	T	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	nonsense	c.592	p.E198*	1.000	superfamily_ARM-type_fold	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1	-	-	34	0	0.00	23	7	23.33
LTK	0	genome.wustl.edu	37	15	41805206	41805206	+	Silent	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	15	41805206	41805206	G	T	SNP	LTK	ENST00000263800	human	ensembl	74_37	-1	known	silent	c.156	p.I52	0.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LTK	HGNC	ENSG00000062524				75	0	0.00	65	4	5.80
LYST	0	genome.wustl.edu	37	1	235896893	235896893	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	235896893	235896893	T	-	DEL	LYST	ENST00000389793	human	ensembl	74_37	-1	known	frame_shift_del	c.8711	p.K2904fs	1.000	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669	tier1			34	0	0.00	35	2	5.41
MAP2K4	0	genome.wustl.edu	37	17	12044509	12044509	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	12044509	12044509	G	T	SNP	MAP2K4	ENST00000415385	human	ensembl	74_37	+1	known	missense	c.1165	p.A389S	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP2K4	HGNC	ENSG00000065559				25	0	0.00	37	3	7.50
MAPK8IP1	0	genome.wustl.edu	37	11	45925666	45925666	+	Silent	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	45925666	45925666	T	C	SNP	MAPK8IP1	ENST00000241014	human	ensembl	74_37	+1	known	silent	c.1620	p.P540	0.554	pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_PTB/PI_dom,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,smart_PTB/PI_dom,pfscan_PTB/PI_dom,pfscan_SH3_domain	-	no_errors	MAPK8IP1	HGNC	ENSG00000121653	tier1	-	-	33	0	0.00	14	3	17.65
MAPK8IP3	0	genome.wustl.edu	37	16	1818620	1818620	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	16	1818620	1818620	C	T	SNP	MAPK8IP3	ENST00000250894	human	ensembl	74_37	+1	known	silent	c.3882	p.F1294	1.000	NULL	pfam_JNK/Rab-associated_protein-1_N,superfamily_WD40_repeat_dom	-	no_errors	MAPK8IP3	HGNC	ENSG00000138834	tier1	-	-	36	0	0.00	40	11	21.57
MARVELD2	0	genome.wustl.edu	37	5	68715895	68715895	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	5	68715895	68715895	C	A	SNP	MARVELD2	ENST00000325631	human	ensembl	74_37	+1	known	nonsense	c.683	p.S228*	0.350	pfam_Marvel	pfam_Occludin_RNApol2_elong_fac_ELL,pfam_Marvel	-	no_errors	MARVELD2	HGNC	ENSG00000152939	tier1	-	-	62	0	0.00	36	18	33.33
MCM6	0	genome.wustl.edu	37	2	136614333	136614333	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	136614333	136614333	C	T	SNP	MCM6	ENST00000264156	human	ensembl	74_37	-1	known	missense	c.1591	p.D531N	1.000	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM6,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM6	HGNC	ENSG00000076003				62	0	0.00	50	3	5.66
MGA	0	genome.wustl.edu	37	15	42042214	42042214	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	15	42042214	42042214	G	T	SNP	MGA	ENST00000219905	human	ensembl	74_37	+1	known	nonsense	c.6409	p.E2137*	0.872	NULL	pfam_TF_T-box,pfam_bHLH_dom,superfamily_p53-like_TF_DNA-bd,superfamily_bHLH_dom,smart_TF_T-box,smart_bHLH_dom,pfscan_bHLH_dom,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	MGA	HGNC	ENSG00000174197				30	0	0.00	23	2	8.00
MMP16	0	genome.wustl.edu	37	8	89339430	89339430	+	Silent	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	8	89339430	89339430	G	A	SNP	MMP16	ENST00000286614	human	ensembl	74_37	-1	known	silent	c.6	p.I2	1.000	NULL	pirsf_Pept_M10A_Metazoans,pfam_Hemopexin-like_repeat,pfam_Pept_M10_metallopeptidase,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP16	HGNC	ENSG00000156103	tier1	-	-	62	0	0.00	39	5	11.36
MRGPRX2	0	genome.wustl.edu	37	11	19077360	19077360	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	19077360	19077360	A	G	SNP	MRGPRX2	ENST00000329773	human	ensembl	74_37	-1	known	missense	c.590	p.V197A	0.063	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	MRGPRX2	HGNC	ENSG00000183695	tier1	-	-	20	0	0.00	22	10	31.25
MRPS25	0	genome.wustl.edu	37	3	15091444	15091444	+	Splice_Site	SNP	T	T	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	15091444	15091444	T	A	SNP	MRPS25	ENST00000420267	human	ensembl	74_37	-1	known	splice_site	c.333-2	e4-2	0.001	-	-	-	no_errors	MRPS25	HGNC	ENSG00000131368	tier1	-	-	30	0	0.00	27	4	12.90
MT-ND5	0	genome.wustl.edu	37	MT	12991	12991	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	MT	12991	12991	G	A	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.655	p.A219T	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1	-	-	15	0	0.00	2	4	66.67
MTHFR	0	genome.wustl.edu	37	1	11852371	11852371	+	Nonsense_Mutation	SNP	G	G	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	11852371	11852371	G	C	SNP	MTHFR	ENST00000376583	human	ensembl	74_37	-1	known	nonsense	c.1719	p.Y573*	0.078	NULL	pfam_Mehydrof_redctse,tigrfam_Fadh2_euk	-	no_errors	MTHFR	HGNC	ENSG00000177000	tier1	-	-	58	0	0.00	43	15	25.86
MUC16	0	genome.wustl.edu	37	19	9063073	9063073	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	9063073	9063073	T	G	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.24373	p.K8125Q	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	81	0	0.00	50	15	23.08
MUC19	0	genome.wustl.edu	37	12	40811954	40811954	+	Silent	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	40811954	40811954	T	C	SNP	MUC19	ENST00000425730	human	ensembl	74_37	+1	putative	silent	c.279	p.Y93	0.000	NULL	pfam_VWF_type-D	-	no_errors	MUC19	HGNC	ENSG00000205592	tier1	-	-	21	0	0.00	18	8	30.77
MURC	0	genome.wustl.edu	37	9	103348507	103348507	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	9	103348507	103348507	G	A	SNP	MURC	ENST00000307584	human	ensembl	74_37	+1	known	missense	c.869	p.R290K	0.699	NULL	NULL	-	no_errors	MURC	HGNC	ENSG00000170681	tier1	-	-	44	0	0.00	67	12	15.19
MXRA5	0	genome.wustl.edu	37	X	3238108	3238108	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	X	3238108	3238108	A	G	SNP	MXRA5	ENST00000217939	human	ensembl	74_37	-1	known	missense	c.5618	p.F1873S	0.746	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MXRA5	HGNC	ENSG00000101825	tier1	-	-	44	0	0.00	28	21	42.86
MXRA5	0	genome.wustl.edu	37	X	3240440	3240440	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	X	3240440	3240440	G	A	SNP	MXRA5	ENST00000217939	human	ensembl	74_37	-1	known	missense	c.3286	p.P1096S	0.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MXRA5	HGNC	ENSG00000101825				39	0	0.00	67	4	5.63
MXRA7	0	genome.wustl.edu	37	17	74684639	74684639	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	74684639	74684639	C	A	SNP	MXRA7	ENST00000592148	human	ensembl	74_37	-1	putative	missense	c.91	p.D31Y	0.001	NULL	NULL	-	no_errors	MXRA7	HGNC	ENSG00000182534	tier1	-	-	37	0	0.00	37	4	9.76
MYH10	0	genome.wustl.edu	37	17	8381682	8381682	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	8381682	8381682	G	A	SNP	MYH10	ENST00000396239	human	ensembl	74_37	-1	known	nonsense	c.5650	p.R1884*	0.998	pfam_Myosin_tail,superfamily_HR1_rho-bd	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_HR1_rho-bd,superfamily_UBA-like,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH10	HGNC	ENSG00000133026				44	0	0.00	34	2	5.56
MYH13	0	genome.wustl.edu	37	17	10265724	10265724	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	10265724	10265724	C	A	SNP	MYH13	ENST00000252172	human	ensembl	74_37	-1	known	missense	c.301	p.A101S	0.842	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH13	HGNC	ENSG00000006788	tier1	-	-	110	0	0.00	99	17	14.53
MYLK3	0	genome.wustl.edu	37	16	46771735	46771735	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	16	46771735	46771735	G	A	SNP	MYLK3	ENST00000394809	human	ensembl	74_37	-1	known	missense	c.889	p.P297S	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MYLK3	HGNC	ENSG00000140795	tier1	-	-	39	0	0.00	47	5	9.62
MYO3A	0	genome.wustl.edu	37	10	26462823	26462823	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	10	26462823	26462823	A	C	SNP	MYO3A	ENST00000265944	human	ensembl	74_37	+1	known	missense	c.3630	p.E1210D	0.592	superfamily_P-loop_NTPase	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3A	HGNC	ENSG00000095777	tier1	-	-	19	0	0.00	17	5	22.73
NAT10	0	genome.wustl.edu	37	11	34144020	34144020	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	34144020	34144020	G	T	SNP	NAT10	ENST00000257829	human	ensembl	74_37	+1	known	missense	c.795	p.L265F	1.000	superfamily_P-loop_NTPase	pfam_Helicase_dom,pfam_DUF1726,superfamily_Acyl_CoA_acyltransferase,superfamily_P-loop_NTPase,pfscan_GNAT_dom	-	no_errors	NAT10	HGNC	ENSG00000135372				45	0	0.00	66	4	5.71
NBEA	0	genome.wustl.edu	37	13	35644148	35644148	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	13	35644148	35644148	A	C	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.1343	p.N448T	1.000	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915	tier1	-	-	169	0	0.00	187	46	19.74
NCAM2	0	genome.wustl.edu	37	21	22710769	22710769	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	21	22710769	22710769	T	A	SNP	NCAM2	ENST00000400546	human	ensembl	74_37	+1	known	missense	c.959	p.L320H	0.988	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom,prints_Neural_cell_adh	-	no_errors	NCAM2	HGNC	ENSG00000154654	tier1	-	-	39	0	0.00	15	9	37.50
NDUFB8	0	genome.wustl.edu	37	10	102289559	102289559	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	10	102289559	102289559	G	T	SNP	NDUFB8	ENST00000299166	human	ensembl	74_37	-1	known	missense	c.50	p.A17E	0.646	pfam_NDUFB8,pirsf_NADH_UbQ_OxRdtase_b-cplx_su8	pfam_NDUFB8,pirsf_NADH_UbQ_OxRdtase_b-cplx_su8	-	no_errors	NDUFB8	HGNC	ENSG00000166136	tier1	-	-	46	0	0.00	78	5	6.02
NDUFS2	0	genome.wustl.edu	37	1	161172165	161172165	+	RNA	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	161172165	161172165	G	T	SNP	NDUFS2	ENST00000467295	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	NDUFS2	HGNC	ENSG00000158864	tier1	-	-	80	0	0.00	62	4	6.06
NEGR1	0	genome.wustl.edu	37	1	71873192	71873192	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	71873192	71873192	G	T	SNP	NEGR1	ENST00000357731	human	ensembl	74_37	-1	known	nonsense	c.1002	p.Y334*	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	NEGR1	HGNC	ENSG00000172260	tier1	-	-	56	0	0.00	61	16	20.78
NELL2	0	genome.wustl.edu	37	12	45000977	45000977	+	Silent	SNP	G	G	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	45000977	45000977	G	C	SNP	NELL2	ENST00000437801	human	ensembl	74_37	-1	known	silent	c.1788	p.G596	1.000	smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_VWF_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_VWC_out,smart_VWF_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	NELL2	HGNC	ENSG00000184613				38	0	0.00	49	3	5.77
NEU4	0	genome.wustl.edu	37	2	242758151	242758151	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	242758151	242758151	T	C	SNP	NEU4	ENST00000325935	human	ensembl	74_37	+1	known	missense	c.1271	p.V424A	1.000	superfamily_Sialidases	superfamily_Sialidases	-	no_errors	NEU4	HGNC	ENSG00000204099	tier1	-	-	136	0	0.00	99	23	18.85
NID1	0	genome.wustl.edu	37	1	236192981	236192981	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	236192981	236192981	C	T	SNP	NID1	ENST00000264187	human	ensembl	74_37	-1	known	missense	c.1607	p.R536Q	1.000	pfam_G2_nidogen/fibulin_G2F,superfamily_GFP,smart_G2_nidogen/fibulin_G2F,pfscan_G2_nidogen/fibulin_G2F	pfam_G2_nidogen/fibulin_G2F,pfam_LDLR_classB_rpt,pfam_Nidogen_extracell_dom,pfam_Thyroglobulin_1,pfam_EGF-like_Ca-bd_dom,superfamily_GFP,superfamily_Thyroglobulin_1,smart_Nidogen_extracell_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_G2_nidogen/fibulin_G2F,smart_Thyroglobulin_1,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thyroglobulin_1	-	no_errors	NID1	HGNC	ENSG00000116962	tier1	-	-	39	0	0.00	21	15	41.67
NIPBL	0	genome.wustl.edu	37	5	36985224	36985224	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	5	36985224	36985224	A	G	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.1942	p.T648A	0.992	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190				28	0	0.00	32	2	5.88
NPAS4	0	genome.wustl.edu	37	11	66191636	66191636	+	Silent	SNP	T	T	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	66191636	66191636	T	G	SNP	NPAS4	ENST00000311034	human	ensembl	74_37	+1	known	silent	c.1275	p.P425	0.853	NULL	pfam_PAS_fold_3,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	NPAS4	HGNC	ENSG00000174576				22	0	0.00	52	8	13.33
NPHS1	0	genome.wustl.edu	37	19	36339237	36339237	+	Silent	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	36339237	36339237	G	A	SNP	NPHS1	ENST00000378910	human	ensembl	74_37	-1	known	silent	c.1233	p.N411	0.677	pfam_CD80_C2-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NPHS1	HGNC	ENSG00000161270	tier1	-	-	53	0	0.00	23	13	35.14
NRXN1	0	genome.wustl.edu	37	2	50147953	50147953	+	RNA	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	50147953	50147953	G	A	SNP	NRXN1	ENST00000484192	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	32	0	0.00	13	6	31.58
NUMA1	0	genome.wustl.edu	37	11	71717113	71717113	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	71717113	71717113	G	A	SNP	NUMA1	ENST00000393695	human	ensembl	74_37	-1	known	missense	c.5660	p.S1887F	1.000	NULL	superfamily_Prefoldin	-	no_errors	NUMA1	HGNC	ENSG00000137497	tier1	-	-	27	0	0.00	78	7	8.24
NUP210L	0	genome.wustl.edu	37	1	154042813	154042813	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	154042813	154042813	G	T	SNP	NUP210L	ENST00000368559	human	ensembl	74_37	-1	known	missense	c.2490	p.F830L	0.210	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,smart_Big_2	-	no_errors	NUP210L	HGNC	ENSG00000143552	tier1	-	-	48	0	0.00	45	24	34.78
NUPL1	0	genome.wustl.edu	37	13	25911128	25911128	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	13	25911128	25911128	G	A	SNP	NUPL1	ENST00000381736	human	ensembl	74_37	+1	known	missense	c.1490	p.G497D	1.000	NULL	NULL	-	no_errors	NUPL1	HGNC	ENSG00000139496				44	0	0.00	58	4	6.45
NXF2B	0	genome.wustl.edu	37	X	101623934	101623934	+	Silent	SNP	A	A	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	X	101623934	101623934	A	G	SNP	NXF2B	ENST00000372749	human	ensembl	74_37	-1	known	silent	c.543	p.S181	0.000	pfam_Tap_RNA-bd	pfam_Tap_RNA-bd,pfam_TAP_C_dom,pfam_NTF2,superfamily_UBA-like,smart_TAP_C_dom,pfscan_Nuclear_transport_factor_2_euk	-	no_errors	NXF2B	HGNC	ENSG00000185945	tier1	-	-	12	0	0.00	5	3	37.50
OR4A5	0	genome.wustl.edu	37	11	51411684	51411684	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	51411684	51411684	T	A	SNP	OR4A5	ENST00000319760	human	ensembl	74_37	-1	known	missense	c.712	p.S238C	0.992	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A5	HGNC	ENSG00000221840				51	0	0.00	24	2	7.69
OR4H6P	0	genome.wustl.edu	37	15	22345668	22345668	+	RNA	SNP	A	A	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	15	22345668	22345668	A	T	SNP	OR4H6P	ENST00000603819	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	OR4H6P	HGNC	ENSG00000261277	tier1	rs76270326	-	11	0	0.00	2	5	71.43
OR5B3	0	genome.wustl.edu	37	11	58170641	58170641	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	58170641	58170641	G	T	SNP	OR5B3	ENST00000309403	human	ensembl	74_37	-1	known	missense	c.242	p.A81D	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5B3	HGNC	ENSG00000172769				63	0	0.00	35	2	5.41
OR8B2	0	genome.wustl.edu	37	11	124252550	124252550	+	Silent	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	124252550	124252550	G	T	SNP	OR8B2	ENST00000375013	human	ensembl	74_37	-1	known	silent	c.690	p.S230	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8B2	HGNC	ENSG00000204293	tier1	-	-	31	0	0.00	23	5	17.86
PADI1	0	genome.wustl.edu	37	1	17556668	17556668	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	17556668	17556668	C	G	SNP	PADI1	ENST00000375471	human	ensembl	74_37	+1	known	missense	c.1018	p.P340A	0.893	pfam_PAD_C,pirsf_Protein-arginine_deiminase_sub	pfam_PAD_C,pfam_Prot_Arg_deaminase_cen_dom,pfam_PAD_N,superfamily_Prot_Arg_deaminase_cen_dom,superfamily_Cupredoxin,pirsf_Protein-arginine_deiminase_sub	-	no_errors	PADI1	HGNC	ENSG00000142623	tier1	-	-	44	0	0.00	48	13	21.31
PADI6	0	genome.wustl.edu	37	1	17720864	17720864	+	RNA	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	17720864	17720864	G	T	SNP	PADI6	ENST00000358481	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	PADI6	HGNC	ENSG00000256049	tier1	-	-	48	0	0.00	43	4	8.51
PAPD7	0	genome.wustl.edu	37	5	6746462	6746462	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	5	6746462	6746462	G	T	SNP	PAPD7	ENST00000230859	human	ensembl	74_37	+1	known	missense	c.631	p.A211S	1.000	pfam_PAP_assoc	pfam_PAP_assoc,pfam_Nucleotidyltransferase	-	no_errors	PAPD7	HGNC	ENSG00000112941				56	0	0.00	55	4	6.78
PARP1	0	genome.wustl.edu	37	1	226549886	226549886	+	RNA	DEL	T	T	-			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	226549886	226549886	T	-	DEL	PARP1	ENST00000491816	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	PARP1	HGNC	ENSG00000143799	tier1			28	0	0.00	24	3	11.11
PCDHGB6	0	genome.wustl.edu	37	5	140788747	140788747	+	Silent	SNP	T	T	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	5	140788747	140788747	T	A	SNP	PCDHGB6	ENST00000520790	human	ensembl	74_37	+1	known	silent	c.978	p.G326	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB6	HGNC	ENSG00000253305	tier1	-	-	35	0	0.00	36	16	30.77
PCNT	0	genome.wustl.edu	37	21	47819581	47819581	+	Silent	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	21	47819581	47819581	T	C	SNP	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	silent	c.4662	p.D1554	0.682	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299	tier1	-	-	51	0	0.00	4	27	87.10
PDE10A	0	genome.wustl.edu	37	6	165801869	165801869	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	6	165801869	165801869	T	G	SNP	PDE10A	ENST00000539869	human	ensembl	74_37	-1	known	missense	c.1730	p.K577T	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE10A	HGNC	ENSG00000112541	tier1	-	-	47	0	0.00	15	14	48.28
PDE6A	0	genome.wustl.edu	37	5	149323979	149323979	+	Silent	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	5	149323979	149323979	G	A	SNP	PDE6A	ENST00000255266	human	ensembl	74_37	-1	known	silent	c.258	p.C86	1.000	pfam_GAF,smart_GAF	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE6A	HGNC	ENSG00000132915	tier1	-	-	24	0	0.00	15	3	16.67
PDZRN4	0	genome.wustl.edu	37	12	41957441	41957441	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	41957441	41957441	C	T	SNP	PDZRN4	ENST00000402685	human	ensembl	74_37	+1	known	missense	c.1457	p.P486L	1.000	superfamily_PDZ,smart_PDZ	pfam_PDZ,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING	-	no_errors	PDZRN4	HGNC	ENSG00000165966				25	0	0.00	33	2	5.71
PER1	0	genome.wustl.edu	37	17	8050700	8050700	+	Splice_Site	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	8050700	8050700	C	A	SNP	PER1	ENST00000317276	human	ensembl	74_37	-1	known	splice_site	c.1498-1	e12-1	0.998	-	-	-	no_errors	PER1	HGNC	ENSG00000179094				52	0	0.00	54	4	6.90
PEX11B	0	genome.wustl.edu	37	1	145522905	145522905	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	145522905	145522905	C	T	SNP	PEX11B	ENST00000369306	human	ensembl	74_37	+1	known	nonsense	c.766	p.R256*	1.000	NULL	pfam_PEX11	-	no_errors	PEX11B	HGNC	ENSG00000131779				11	0	0.00	23	3	11.54
PF4V1	0	genome.wustl.edu	37	4	74719825	74719825	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	4	74719825	74719825	C	T	SNP	PF4V1	ENST00000226524	human	ensembl	74_37	+1	known	missense	c.301	p.H101Y	0.021	superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom,prints_Chemokine_CXC	-	no_errors	PF4V1	HGNC	ENSG00000109272	tier1	-	-	12	0	0.00	29	10	25.64
PHLDB1	0	genome.wustl.edu	37	11	118502746	118502746	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	118502746	118502746	G	T	SNP	PHLDB1	ENST00000361417	human	ensembl	74_37	+1	known	missense	c.2217	p.Q739H	1.000	NULL	pfam_Pleckstrin_homology,superfamily_SMAD_FHA_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB1	HGNC	ENSG00000019144				34	0	0.00	38	3	7.32
PIK3C2B	0	genome.wustl.edu	37	1	204425008	204425008	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	204425008	204425008	C	T	SNP	PIK3C2B	ENST00000367187	human	ensembl	74_37	-1	known	missense	c.1919	p.R640H	1.000	superfamily_C2_dom,smart_PI3K_C2_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,pfam_Phox,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,superfamily_Phox,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,smart_Phox,smart_C2_dom,pfscan_C2_dom,pfscan_Phox,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C2B	HGNC	ENSG00000133056	tier1	-	-	31	0	0.00	33	4	10.81
PKD1	0	genome.wustl.edu	37	16	2144123	2144123	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	16	2144123	2144123	G	A	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	nonsense	c.10588	p.Q3530*	0.000	NULL	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710	tier1	-	-	11	0	0.00	12	7	36.84
PKD1	0	genome.wustl.edu	37	16	2148015	2148015	+	RNA	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	16	2148015	2148015	G	A	SNP	PKD1	ENST00000566784	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	PKD1	HGNC	ENSG00000008710	tier1	rs4018144	-	155	0	0.00	133	47	26.11
PKHD1	0	genome.wustl.edu	37	6	51503711	51503711	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	6	51503711	51503711	G	T	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	nonsense	c.11442	p.Y3814*	1.000	NULL	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927	tier1	-	-	57	0	0.00	63	4	5.97
PLA2G4E	0	genome.wustl.edu	37	15	42292154	42292154	+	Silent	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	15	42292154	42292154	G	T	SNP	PLA2G4E	ENST00000413860	human	ensembl	74_37	-1	known	silent	c.810	p.L270	0.086	NULL	pfam_LysoPLipase_cat_dom,pfam_C2_dom,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_dom,smart_C2_dom,smart_LysoPLipase_cat_dom,pfscan_C2_dom,pfscan_LysoPLipase_cat_dom	-	no_errors	PLA2G4E	HGNC	ENSG00000188089				28	0	0.00	20	2	9.09
PLCB4	0	genome.wustl.edu	37	20	9449234	9449234	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	20	9449234	9449234	C	T	SNP	PLCB4	ENST00000334005	human	ensembl	74_37	+1	known	nonsense	c.3229	p.R1077*	1.000	pirsf_PLC-beta	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_PLC-beta_CS,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB4	HGNC	ENSG00000101333				47	0	0.00	37	2	5.13
PLCH2	0	genome.wustl.edu	37	1	2420795	2420795	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	2420795	2420795	T	C	SNP	PLCH2	ENST00000378486	human	ensembl	74_37	+1	known	missense	c.1385	p.L462P	0.999	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom,prints_Pinositol_PLipase_C	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCH2	HGNC	ENSG00000149527	tier1	-	-	25	0	0.00	25	7	21.88
PLK1	0	genome.wustl.edu	37	16	23691416	23691416	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	16	23691416	23691416	G	T	SNP	PLK1	ENST00000300093	human	ensembl	74_37	+1	known	missense	c.420	p.E140D	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_POLO_box_duplicated_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_POLO_box_duplicated_dom,pfscan_Prot_kinase_dom	-	no_errors	PLK1	HGNC	ENSG00000166851	tier1	-	-	52	0	0.00	57	4	6.56
PLXDC1	0	genome.wustl.edu	37	17	37234192	37234192	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	37234192	37234192	A	T	SNP	PLXDC1	ENST00000315392	human	ensembl	74_37	-1	known	missense	c.1160	p.L387H	0.672	NULL	pfam_Plexin_repeat,superfamily_Plexin-like_fold	-	no_errors	PLXDC1	HGNC	ENSG00000161381	tier1	-	-	24	0	0.00	28	10	26.32
POLQ	0	genome.wustl.edu	37	3	121178982	121178982	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	121178982	121178982	G	A	SNP	POLQ	ENST00000264233	human	ensembl	74_37	-1	known	missense	c.7067	p.A2356V	0.993	pfam_DNA-dir_DNA_pol_A_palm_dom,smart_DNA-dir_DNA_pol_A_palm_dom	pfam_DNA-dir_DNA_pol_A_palm_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_DNA-dir_DNA_pol_A_palm_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_DNA_polymerase_A	-	no_errors	POLQ	HGNC	ENSG00000051341	tier1	-	-	34	0	0.00	17	13	43.33
PPP1R16A	0	genome.wustl.edu	37	8	145724303	145724303	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	8	145724303	145724303	G	A	SNP	PPP1R16A	ENST00000292539	human	ensembl	74_37	+1	known	missense	c.335	p.C112Y	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PPP1R16A	HGNC	ENSG00000160972				35	0	0.00	35	2	5.41
PPP1R3A	0	genome.wustl.edu	37	7	113520081	113520081	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	7	113520081	113520081	A	C	SNP	PPP1R3A	ENST00000284601	human	ensembl	74_37	-1	known	missense	c.1066	p.L356V	0.346	NULL	pfam_CBM_21,pfscan_CBM_21	-	no_errors	PPP1R3A	HGNC	ENSG00000154415	tier1	-	-	74	0	0.00	20	17	44.74
PRKAR1B	0	genome.wustl.edu	37	7	720328	720328	+	Silent	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	7	720328	720328	T	C	SNP	PRKAR1B	ENST00000360274	human	ensembl	74_37	-1	known	silent	c.213	p.S71	0.415	pirsf_cAMP_dep_PK_reg_su	pfam_cNMP-bd_dom,pfam_cAMP_dep_PK_reg_su_I/II_a/b,superfamily_cNMP-bd-like,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,smart_cAMP_dep_PK_reg_su_I/II_a/b,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom,prints_cAMP/cGMP_kin	-	no_errors	PRKAR1B	HGNC	ENSG00000188191				40	0	0.00	25	2	7.41
PRKCZ	0	genome.wustl.edu	37	1	2087464	2087464	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	2087464	2087464	G	T	SNP	PRKCZ	ENST00000378567	human	ensembl	74_37	+1	known	missense	c.907	p.V303L	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_PKC_zeta,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_PKC_zeta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKCZ	HGNC	ENSG00000067606				54	0	0.00	50	3	5.66
PRKD1	0	genome.wustl.edu	37	14	30068314	30068314	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	14	30068314	30068314	C	T	SNP	PRKD1	ENST00000331968	human	ensembl	74_37	-1	known	silent	c.2085	p.R695	0.218	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD1	HGNC	ENSG00000184304				40	0	0.00	29	2	6.45
PRKG1	0	genome.wustl.edu	37	10	53841384	53841384	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	10	53841384	53841384	A	-	DEL	PRKG1	ENST00000373975	human	ensembl	74_37	+1	putative	frame_shift_del	c.11	p.N5fs	0.020	pfscan_cNMP-bd_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_cNMP-bd-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_cNMP-bd_dom,pfscan_Prot_kinase_dom,prints_cGMP_dep_kinase,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PRKG1	HGNC	ENSG00000185532	tier1			23	0	0.00	31	2	6.06
PRKG2	0	genome.wustl.edu	37	4	82126024	82126024	+	Nonsense_Mutation	SNP	T	T	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	4	82126024	82126024	T	A	SNP	PRKG2	ENST00000264399	human	ensembl	74_37	-1	known	nonsense	c.178	p.K60*	0.871	pirsf_cGMP-dependent_protein_kinase	pfam_Prot_kinase_dom,pfam_cNMP-bd_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_cGMP-dependent_protein_kinase,pfscan_cNMP-bd_dom,pfscan_Prot_kinase_dom,prints_cGMP_dep_kinase,prints_cAMP/cGMP_kin	-	no_errors	PRKG2	HGNC	ENSG00000138669	tier1	-	-	30	0	0.00	5	10	66.67
PRLHR	0	genome.wustl.edu	37	10	120354100	120354100	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	10	120354100	120354100	C	A	SNP	PRLHR	ENST00000239032	human	ensembl	74_37	-1	known	missense	c.657	p.E219D	0.995	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Prolrel_pep_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Prolrel_pep_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	PRLHR	HGNC	ENSG00000119973	tier1	-	-	28	0	0.00	13	30	69.77
PRPS1	0	genome.wustl.edu	37	X	106885630	106885630	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	X	106885630	106885630	C	T	SNP	PRPS1	ENST00000372435	human	ensembl	74_37	+1	known	missense	c.440	p.A147V	1.000	tigrfam_Rib-P_diPkinase	pfam_PRibTrfase_dom,tigrfam_Rib-P_diPkinase	-	no_errors	PRPS1	HGNC	ENSG00000147224	tier1	-	-	34	0	0.00	51	4	7.27
PSME1	0	genome.wustl.edu	37	14	24607555	24607555	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	14	24607555	24607555	T	C	SNP	PSME1	ENST00000382708	human	ensembl	74_37	+1	known	missense	c.529	p.Y177H	1.000	pfam_Proteasome_activ_pa28_C,superfamily_Proteasome_activ_pa28	pfam_Proteasome_activ_pa28_C,pfam_Proteasome_activ_pa28_N,superfamily_Proteasome_activ_pa28	-	no_errors	PSME1	HGNC	ENSG00000092010	tier1	-	-	45	0	0.00	13	13	50.00
PTPN21	0	genome.wustl.edu	37	14	88945583	88945583	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	14	88945583	88945583	C	T	SNP	PTPN21	ENST00000328736	human	ensembl	74_37	-1	known	missense	c.2192	p.R731H	0.000	pirsf_Tyr_Pase_non-rcpt_typ-14/21	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,superfamily_FERM_central,smart_Band_41_domain,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-14/21,pfscan_FERM_domain,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam	-	no_errors	PTPN21	HGNC	ENSG00000070778	tier1	-	-	52	0	0.00	15	22	59.46
PTPN23	0	genome.wustl.edu	37	3	47453615	47453615	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	47453615	47453615	C	T	SNP	PTPN23	ENST00000265562	human	ensembl	74_37	+1	known	missense	c.4105	p.R1369C	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_BRO1_dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_BRO1_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN23	HGNC	ENSG00000076201				26	0	0.00	13	2	13.33
RAB35	0	genome.wustl.edu	37	12	120541663	120541663	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	120541663	120541663	G	A	SNP	RAB35	ENST00000229340	human	ensembl	74_37	-1	known	missense	c.194	p.A65V	0.999	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB35	HGNC	ENSG00000111737	tier1	-	-	41	0	0.00	43	4	8.51
RASAL3	0	genome.wustl.edu	37	19	15571892	15571892	+	Silent	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	15571892	15571892	G	T	SNP	RASAL3	ENST00000343625	human	ensembl	74_37	-1	known	silent	c.585	p.P195	0.986	NULL	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_RasGAP,pfscan_RasGAP	-	no_errors	RASAL3	HGNC	ENSG00000105122				66	0	0.00	45	4	8.16
RBMXL2	0	genome.wustl.edu	37	11	7111369	7111369	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	7111369	7111369	C	T	SNP	RBMXL2	ENST00000306904	human	ensembl	74_37	+1	known	nonsense	c.1018	p.R340*	1.000	NULL	pfam_RRM_dom,pfam_RBM1CTR,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMXL2	HGNC	ENSG00000170748	tier1	-	-	35	0	0.00	26	21	44.68
REV1	0	genome.wustl.edu	37	2	100021024	100021024	+	Silent	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	100021024	100021024	G	A	SNP	REV1	ENST00000258428	human	ensembl	74_37	-1	known	silent	c.2928	p.G976	0.988	pirsf_REV1	pfam_DNA_repair_prot_UmuC-like,pfam_DNA_pol_Y-fam_little_finger,pfam_BRCT_dom,superfamily_BRCT_dom,superfamily_DNA_pol_Y-fam_little_finger,smart_BRCT_dom,pirsf_REV1,pfscan_BRCT_dom,pfscan_DNA_repair_prot_UmuC-like_N	-	no_errors	REV1	HGNC	ENSG00000135945				75	0	0.00	53	3	5.36
RHOU	0	genome.wustl.edu	37	1	228879482	228879482	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	228879482	228879482	G	A	SNP	RHOU	ENST00000366691	human	ensembl	74_37	+1	known	missense	c.772	p.V258I	0.811	NULL	pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOU	HGNC	ENSG00000116574				16	0	0.00	33	2	5.71
RIC3	0	genome.wustl.edu	37	11	8159966	8159967	+	RNA	INS	-	-	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	8159966	8159967	-	A	INS	RIC3	ENST00000524799	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RIC3	HGNC	ENSG00000166405	tier1			40	0	0.00	37	3	7.50
RNF2	0	genome.wustl.edu	37	1	185069041	185069041	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	185069041	185069041	G	A	SNP	RNF2	ENST00000367510	human	ensembl	74_37	+1	known	missense	c.856	p.A286T	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF2	HGNC	ENSG00000121481				57	0	0.00	43	3	6.52
RPS10	0	genome.wustl.edu	37	6	34393814	34393814	+	RNA	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	6	34393814	34393814	C	T	SNP	RPS10	ENST00000480942	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RPS10	HGNC	ENSG00000124614	tier1	-	-	28	0	0.00	25	4	13.79
RPS6KL1	0	genome.wustl.edu	37	14	75388105	75388105	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	14	75388105	75388105	C	A	SNP	RPS6KL1	ENST00000358328	human	ensembl	74_37	-1	known	missense	c.140	p.R47L	0.987	smart_MIT	pfam_Prot_kinase_dom,pfam_MIT,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_MIT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	RPS6KL1	HGNC	ENSG00000198208	tier1	-	-	32	0	0.00	26	8	23.53
RSPH4A	0	genome.wustl.edu	37	6	116938141	116938141	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	6	116938141	116938141	G	T	SNP	RSPH4A	ENST00000229554	human	ensembl	74_37	+1	known	nonsense	c.355	p.E119*	0.000	NULL	pfam_Radial_spoke	-	no_errors	RSPH4A	HGNC	ENSG00000111834				29	0	0.00	35	3	7.89
SAGE1	0	genome.wustl.edu	37	X	134987423	134987423	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	X	134987423	134987423	C	G	SNP	SAGE1	ENST00000324447	human	ensembl	74_37	+1	known	missense	c.326	p.A109G	0.004	NULL	NULL	-	no_errors	SAGE1	HGNC	ENSG00000181433	tier1	-	-	21	0	0.00	10	16	61.54
SCARB1	0	genome.wustl.edu	37	12	125294827	125294827	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	125294827	125294827	G	T	SNP	SCARB1	ENST00000415380	human	ensembl	74_37	-1	known	missense	c.735	p.F245L	0.949	pfam_CD36	pfam_CD36,prints_CD36,prints_CD36_antigen	-	no_errors	SCARB1	HGNC	ENSG00000073060	tier1	-	-	54	0	0.00	59	4	6.35
SCARB2	0	genome.wustl.edu	37	4	77091064	77091064	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	4	77091064	77091064	G	A	SNP	SCARB2	ENST00000264896	human	ensembl	74_37	-1	known	missense	c.1069	p.H357Y	0.936	pfam_CD36,superfamily_NA-bd_OB-fold,prints_CD36_antigen	pfam_CD36,superfamily_NA-bd_OB-fold,prints_LimpII,prints_CD36,prints_CD36_antigen	-	no_errors	SCARB2	HGNC	ENSG00000138760	tier1	-	-	35	0	0.00	24	4	14.29
SCN1A	0	genome.wustl.edu	37	2	166848274	166848274	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	166848274	166848274	C	T	SNP	SCN1A	ENST00000303395	human	ensembl	74_37	-1	known	silent	c.5511	p.P1837	0.075	NULL	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a1su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN1A	HGNC	ENSG00000144285	tier1	-	-	51	0	0.00	21	28	57.14
SEMA3G	0	genome.wustl.edu	37	3	52474808	52474808	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	52474808	52474808	C	T	SNP	SEMA3G	ENST00000231721	human	ensembl	74_37	-1	known	silent	c.960	p.G320	0.989	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3G	HGNC	ENSG00000010319	tier1	-	-	33	0	0.00	24	11	31.43
SENP2	0	genome.wustl.edu	37	3	185300577	185300577	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	185300577	185300577	G	A	SNP	SENP2	ENST00000545472	human	ensembl	74_37	+1	known	missense	c.43	p.E15K	0.000	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP2	HGNC	ENSG00000163904	tier1	-	-	71	0	0.00	73	15	17.05
SERBP1	0	genome.wustl.edu	37	1	67880930	67880930	+	Silent	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	67880930	67880930	G	A	SNP	SERBP1	ENST00000370995	human	ensembl	74_37	-1	known	silent	c.1089	p.G363	1.000	NULL	pfam_HABP4_PAIRBP1-bd	-	no_errors	SERBP1	HGNC	ENSG00000142864	tier1	-	-	40	0	0.00	61	5	7.58
SLC10A5	0	genome.wustl.edu	37	8	82606431	82606431	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	8	82606431	82606431	C	T	SNP	SLC10A5	ENST00000518568	human	ensembl	74_37	-1	known	silent	c.777	p.R259	0.002	pfam_BilAc/Na_symport	pfam_BilAc/Na_symport	-	no_errors	SLC10A5	HGNC	ENSG00000253598	tier1	-	-	35	0	0.00	19	9	32.14
SLC28A1	0	genome.wustl.edu	37	15	85431044	85431044	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	15	85431044	85431044	C	T	SNP	SLC28A1	ENST00000286749	human	ensembl	74_37	+1	known	missense	c.53	p.A18V	0.002	NULL	pfam_Nucleos_tra2_C,pfam_Nuclsd_transpt2,pfam_Nucleoside_recog_Gate,tigrfam_C_nuclsd_transpt_met_bac	-	no_errors	SLC28A1	HGNC	ENSG00000156222				82	0	0.00	55	4	6.78
SLC45A1	0	genome.wustl.edu	37	1	8395635	8395635	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	8395635	8395635	G	A	SNP	SLC45A1	ENST00000377479	human	ensembl	74_37	+1	known	missense	c.1684	p.V562I	1.000	superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC45A1	HGNC	ENSG00000162426	tier1	-	-	49	0	0.00	60	23	27.71
SLC46A2	0	genome.wustl.edu	37	9	115652722	115652722	+	Silent	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	9	115652722	115652722	G	T	SNP	SLC46A2	ENST00000374228	human	ensembl	74_37	-1	known	silent	c.240	p.I80	1.000	NULL	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Tet-R_TetA/multi-R_MdtG	-	no_errors	SLC46A2	HGNC	ENSG00000119457	tier1	-	-	45	0	0.00	38	6	13.64
SLC6A12	0	genome.wustl.edu	37	12	305292	305292	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	305292	305292	C	A	SNP	SLC6A12	ENST00000359674	human	ensembl	74_37	-1	known	nonsense	c.1324	p.E442*	0.846	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_betaine	-	no_errors	SLC6A12	HGNC	ENSG00000111181				40	0	0.00	38	2	5.00
SLC9A3R1	0	genome.wustl.edu	37	17	72764670	72764670	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	72764670	72764670	G	T	SNP	SLC9A3R1	ENST00000262613	human	ensembl	74_37	+1	known	missense	c.952	p.D318Y	0.991	pfam_EBP50_C-term,pirsf_NaH_exchngr_reg_CF_NHE-RF	pfam_PDZ,pfam_EBP50_C-term,superfamily_PDZ,smart_PDZ,pirsf_NaH_exchngr_reg_CF_NHE-RF,pfscan_PDZ	-	no_errors	SLC9A3R1	HGNC	ENSG00000109062				57	0	0.00	62	4	6.06
SLIT2	0	genome.wustl.edu	37	4	20569178	20569178	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	4	20569178	20569178	G	A	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	missense	c.2888	p.S963N	1.000	pfam_EG-like_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147	tier1	-	-	43	0	0.00	43	4	8.51
SLITRK1	0	genome.wustl.edu	37	13	84455568	84455568	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	13	84455568	84455568	T	G	SNP	SLITRK1	ENST00000377084	human	ensembl	74_37	-1	known	missense	c.75	p.K25N	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK1	HGNC	ENSG00000178235	tier1	-	-	23	0	0.00	24	6	20.00
SMAD5-AS1	0	genome.wustl.edu	37	5	135469656	135469656	+	RNA	SNP	A	A	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	5	135469656	135469656	A	C	SNP	SMAD5-AS1	ENST00000297163	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SMAD5-AS1	HGNC	ENSG00000164621	tier1	-	-	61	0	0.00	70	16	18.60
SNRNP200	0	genome.wustl.edu	37	2	96943977	96943977	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	96943977	96943977	G	T	SNP	SNRNP200	ENST00000323853	human	ensembl	74_37	-1	known	missense	c.5608	p.Q1870K	1.000	pfam_Sec63-dom,smart_Sec63-dom	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SNRNP200	HGNC	ENSG00000144028				35	0	0.00	26	3	10.34
SNRPD2	0	genome.wustl.edu	37	19	46191713	46191713	+	Silent	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	46191713	46191713	G	A	SNP	SNRPD2	ENST00000342669	human	ensembl	74_37	-1	known	silent	c.114	p.N38	1.000	pfam_Ribonucl_LSM,superfamily_LSM_dom,smart_Ribonucl_LSM_euk/arc	pfam_Ribonucl_LSM,superfamily_LSM_dom,smart_Ribonucl_LSM_euk/arc	-	no_errors	SNRPD2	HGNC	ENSG00000125743	tier1	-	-	78	0	0.00	65	4	5.80
SNUPN	0	genome.wustl.edu	37	15	75890977	75890977	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	15	75890977	75890977	C	T	SNP	SNUPN	ENST00000371091	human	ensembl	74_37	-1	known	missense	c.931	p.G311R	1.000	pirsf_Snurportin-1	pfam_Snurportin-1_N,pirsf_Snurportin-1,pfscan_Importin-a_IBB	-	no_errors	SNUPN	HGNC	ENSG00000169371	tier1	rs138384328	-	51	0	0.00	22	20	47.62
SORCS3	0	genome.wustl.edu	37	10	106907435	106907435	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	10	106907435	106907435	C	G	SNP	SORCS3	ENST00000369701	human	ensembl	74_37	+1	known	missense	c.1363	p.Q455E	1.000	smart_VPS10	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS3	HGNC	ENSG00000156395	tier1	-	-	61	0	0.00	66	13	16.46
SPIDR	0	genome.wustl.edu	37	8	48353023	48353023	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	8	48353023	48353023	G	T	SNP	SPIDR	ENST00000297423	human	ensembl	74_37	+1	known	missense	c.1016	p.G339V	0.000	NULL	NULL	-	no_errors	SPIDR	HGNC	ENSG00000164808				48	0	0.00	32	2	5.88
SSPO	0	genome.wustl.edu	37	7	149484958	149484959	+	RNA	INS	-	-	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	7	149484958	149484959	-	G	INS	SSPO	ENST00000262089	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:0.010	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1			80	0	0.00	23	16	41.03
STEAP3	0	genome.wustl.edu	37	2	120003167	120003167	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	120003167	120003167	G	A	SNP	STEAP3	ENST00000393110	human	ensembl	74_37	+1	known	missense	c.125	p.G42D	1.000	NULL	pfam_Fe3_Rdtase_TM_dom	-	no_errors	STEAP3	HGNC	ENSG00000115107	tier1	-	-	52	0	0.00	64	4	5.88
STK10	0	genome.wustl.edu	37	5	171509489	171509489	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	5	171509489	171509489	G	T	SNP	STK10	ENST00000176763	human	ensembl	74_37	-1	known	missense	c.1830	p.D610E	0.891	pfam_PKK	pfam_PKK,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK10	HGNC	ENSG00000072786				24	0	0.00	34	4	10.26
STT3B	0	genome.wustl.edu	37	3	31663635	31663635	+	Silent	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	31663635	31663635	G	T	SNP	STT3B	ENST00000295770	human	ensembl	74_37	+1	known	silent	c.1374	p.V458	0.995	pfam_Oligo_trans_STT3	pfam_Oligo_trans_STT3	-	no_errors	STT3B	HGNC	ENSG00000163527	tier1	-	-	31	0	0.00	35	4	10.26
SYNGAP1	0	genome.wustl.edu	37	6	33411523	33411523	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	6	33411523	33411523	C	T	SNP	SYNGAP1	ENST00000418600	human	ensembl	74_37	+1	known	missense	c.3194	p.P1065L	0.926	pfam_DUF3498	pfam_DUF3498,pfam_RasGAP,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	SYNGAP1	HGNC	ENSG00000197283	tier1	-	-	28	0	0.00	17	10	37.04
TARDBP	0	genome.wustl.edu	37	1	11080620	11080620	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	11080620	11080620	C	T	SNP	TARDBP	ENST00000240185	human	ensembl	74_37	+1	known	silent	c.678	p.F226	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	TARDBP	HGNC	ENSG00000120948	tier1	-	-	74	0	0.00	66	12	15.38
TBX5	0	genome.wustl.edu	37	12	114793480	114793480	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	114793480	114793480	G	T	SNP	TBX5	ENST00000310346	human	ensembl	74_37	-1	known	missense	c.1414	p.P472T	1.000	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX5	HGNC	ENSG00000089225	tier1	-	-	50	0	0.00	38	4	9.09
TEX13A	0	genome.wustl.edu	37	X	104463918	104463918	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	X	104463918	104463918	G	A	SNP	TEX13A	ENST00000413579	human	ensembl	74_37	-1	known	missense	c.958	p.P320S	0.008	NULL	pfam_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	TEX13A	HGNC	ENSG00000133149	tier1	-	-	24	0	0.00	5	19	79.17
TFAM	0	genome.wustl.edu	37	10	60154864	60154864	+	RNA	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	10	60154864	60154864	G	T	SNP	TFAM	ENST00000373899	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.772	-	-	-	no_errors	TFAM	HGNC	ENSG00000108064	tier1	-	-	33	0	0.00	36	4	10.00
TM2D3	0	genome.wustl.edu	37	15	102182790	102182791	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	15	102182790	102182791	-	C	INS	TM2D3	ENST00000333202	human	ensembl	74_37	-1	known	frame_shift_ins	c.636_635	p.L213fs	0.994:1.000	pfam_TM2	pfam_TM2	-	no_errors	TM2D3	HGNC	ENSG00000184277	tier1			10	0	0.00	4	2	33.33
TM4SF18	0	genome.wustl.edu	37	3	149051106	149051106	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	149051106	149051106	T	C	SNP	TM4SF18	ENST00000296059	human	ensembl	74_37	-1	known	missense	c.64	p.I22V	0.996	pfam_L6_membrane	pfam_L6_membrane	-	no_errors	TM4SF18	HGNC	ENSG00000163762				20	0	0.00	48	3	5.88
TNNT2	0	genome.wustl.edu	37	1	201331138	201331138	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	201331138	201331138	T	-	DEL	TNNT2	ENST00000458432	human	ensembl	74_37	-1	known	frame_shift_del	c.619	p.S207fs	0.414	pfam_Troponin	pfam_Troponin	-	no_errors	TNNT2	HGNC	ENSG00000118194	tier1			46	0	0.00	30	2	6.25
TNRC6C	0	genome.wustl.edu	37	17	76099514	76099514	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	76099514	76099514	G	T	SNP	TNRC6C	ENST00000335749	human	ensembl	74_37	+1	known	missense	c.4700	p.R1567L	1.000	NULL	pfam_Argonaute_hook_dom,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TNRC6C	HGNC	ENSG00000078687	tier1	-	-	65	0	0.00	66	4	5.71
TPTE2	0	genome.wustl.edu	37	13	20048088	20048089	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	13	20048088	20048089	-	A	INS	TPTE2	ENST00000382977	human	ensembl	74_37	-1	known	frame_shift_ins	c.358_357	p.L119fs	0.050:0.090	pfam_Ion_trans_dom	pfam_Tensin_phosphatase_C2-dom,pfam_Ion_trans_dom,pfam_Dual-sp_phosphatase_cat-dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE2	HGNC	ENSG00000132958	tier1			158	0	0.00	201	31	13.36
TPTEP1	0	genome.wustl.edu	37	22	17082854	17082854	+	RNA	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	22	17082854	17082854	G	T	SNP	TPTEP1	ENST00000400593	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.796	-	-	-	no_errors	TPTEP1	HGNC	ENSG00000100181	tier1	-	-	27	0	0.00	14	4	22.22
TRIM55	0	genome.wustl.edu	37	8	67062681	67062681	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	8	67062681	67062681	G	T	SNP	TRIM55	ENST00000315962	human	ensembl	74_37	+1	known	missense	c.965	p.R322L	1.000	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM55	HGNC	ENSG00000147573				63	0	0.00	34	2	5.56
TRPC4	0	genome.wustl.edu	37	13	38320271	38320271	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	13	38320271	38320271	C	A	SNP	TRPC4	ENST00000379681	human	ensembl	74_37	-1	known	nonsense	c.700	p.E234*	1.000	pfam_TRP_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC4_channel,prints_TRPC_channel,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	-	no_errors	TRPC4	HGNC	ENSG00000133107	tier1	-	-	52	0	0.00	51	7	12.07
TSHZ3	0	genome.wustl.edu	37	19	31769567	31769567	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	31769567	31769567	A	G	SNP	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	missense	c.1132	p.F378L	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297	tier1	-	-	46	0	0.00	18	9	33.33
TTC30B	0	genome.wustl.edu	37	2	178417117	178417117	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	178417117	178417117	G	T	SNP	TTC30B	ENST00000408939	human	ensembl	74_37	-1	known	missense	c.375	p.S125R	0.397	NULL	smart_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC30B	HGNC	ENSG00000196659	tier1	-	-	43	0	0.00	48	5	9.43
TTN	0	genome.wustl.edu	37	2	179398419	179398419	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	179398419	179398419	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.95219	p.T31740K	0.920	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	49	0	0.00	61	4	6.15
TXNDC11	0	genome.wustl.edu	37	16	11827869	11827873	+	Frame_Shift_Del	DEL	AAAAG	AAAAG	-			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	AAAAG	AAAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	16	11827869	11827873	AAAAG	0	DEL	TXNDC11	ENST00000356957	human	ensembl	74_37	-1	known	frame_shift_del	c.538_534	p.F178fs	1.000:1.000:1.000:1.000:1.000	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC11	HGNC	ENSG00000153066				53	0	0.00	61	6	8.96
UBA1	0	genome.wustl.edu	37	X	47065781	47065781	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	X	47065781	47065781	G	T	SNP	UBA1	ENST00000335972	human	ensembl	74_37	+1	known	nonsense	c.1876	p.E626*	1.000	pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB,tigrfam_UBQ-activ_enz_E1	pfam_ThiF_NAD_FAD-bd,pfam_Ub-activating_enz_e1_C,pfam_UBact_repeat,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	-	no_errors	UBA1	HGNC	ENSG00000130985				15	0	0.00	13	3	18.75
UBE3B	0	genome.wustl.edu	37	12	109972420	109972420	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	109972420	109972420	G	A	SNP	UBE3B	ENST00000342494	human	ensembl	74_37	+1	known	missense	c.3040	p.V1014I	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_IQ_motif_EF-hand-BS,superfamily_HECT,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,smart_HECT,pfscan_HECT,pfscan_IQ_motif_EF-hand-BS	-	no_errors	UBE3B	HGNC	ENSG00000151148	tier1	-	-	25	0	0.00	30	14	31.82
UBQLN3	0	genome.wustl.edu	37	11	5530262	5530262	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	5530262	5530262	A	G	SNP	UBQLN3	ENST00000311659	human	ensembl	74_37	-1	known	missense	c.527	p.F176S	1.000	NULL	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_ARM-type_fold,smart_Ubiquitin_dom,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN3	HGNC	ENSG00000175520	tier1	-	-	33	0	0.00	44	12	21.43
UCP1	0	genome.wustl.edu	37	4	141481057	141481057	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	4	141481057	141481057	G	A	SNP	UCP1	ENST00000262999	human	ensembl	74_37	-1	known	missense	c.917	p.A306V	0.867	NULL	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_uncoupling	-	no_errors	UCP1	HGNC	ENSG00000109424	tier1	-	-	49	0	0.00	59	4	6.25
UGT2B28	0	genome.wustl.edu	37	4	70156482	70156482	+	Silent	SNP	G	G	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	4	70156482	70156482	G	C	SNP	UGT2B28	ENST00000335568	human	ensembl	74_37	+1	known	silent	c.1263	p.S421	0.001	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2B28	HGNC	ENSG00000135226	tier1	-	-	164	0	0.00	92	32	25.81
UPK1A	0	genome.wustl.edu	37	19	36168744	36168744	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	36168744	36168744	G	A	SNP	UPK1A	ENST00000222275	human	ensembl	74_37	+1	known	missense	c.679	p.D227N	0.988	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	UPK1A	HGNC	ENSG00000105668	tier1	-	-	81	0	0.00	65	4	5.80
USP26	0	genome.wustl.edu	37	X	132160963	132160963	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	X	132160963	132160963	C	A	SNP	USP26	ENST00000370832	human	ensembl	74_37	-1	known	missense	c.1286	p.G429V	0.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP26	HGNC	ENSG00000134588	tier1	-	-	39	0	0.00	7	25	78.12
UTP20	0	genome.wustl.edu	37	12	101764854	101764854	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	101764854	101764854	C	T	SNP	UTP20	ENST00000261637	human	ensembl	74_37	+1	known	silent	c.6706	p.L2236	0.816	superfamily_ARM-type_fold	pfam_DRIM,superfamily_ARM-type_fold	-	no_errors	UTP20	HGNC	ENSG00000120800				32	0	0.00	31	2	6.06
VAPB	0	genome.wustl.edu	37	20	57016116	57016116	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	20	57016116	57016116	C	T	SNP	VAPB	ENST00000475243	human	ensembl	74_37	+1	known	missense	c.550	p.R184W	0.998	pirsf_Vesicle-associated_membrane	pfam_MSP_dom,superfamily_PapD-like,pirsf_Vesicle-associated_membrane,pfscan_MSP_dom	-	no_errors	VAPB	HGNC	ENSG00000124164				41	0	0.00	37	2	5.13
VPS9D1	0	genome.wustl.edu	37	16	89778882	89778882	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	16	89778882	89778882	C	T	SNP	VPS9D1	ENST00000389386	human	ensembl	74_37	-1	known	missense	c.592	p.A198T	1.000	NULL	pfam_VPS9,smart_VPS9_subgr,pfscan_VPS9	-	no_errors	VPS9D1	HGNC	ENSG00000075399	tier1	-	-	78	0	0.00	60	53	46.90
VWA5B1	0	genome.wustl.edu	37	1	20669680	20669680	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	1	20669680	20669680	C	T	SNP	VWA5B1	ENST00000289815	human	ensembl	74_37	+1	known	missense	c.2420	p.P807L	0.001	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA5B1	HGNC	ENSG00000158816	tier1	-	-	24	0	0.00	11	7	38.89
WASL	0	genome.wustl.edu	37	7	123332839	123332841	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	7	123332839	123332841	AGG	-	DEL	WASL	ENST00000223023	human	ensembl	74_37	-1	known	in_frame_del	c.909_907	p.P303in_frame_del	0.996:1.000:1.000	superfamily_WASP_C	pfam_WH1/EVH1,pfam_CRIB_dom,pfam_WH2_dom,superfamily_WASP_C,smart_WH1/EVH1,smart_CRIB_dom,smart_WH2_dom,pfscan_CRIB_dom,pfscan_WH1/EVH1,pfscan_WH2_dom	-	no_errors	WASL	HGNC	ENSG00000106299	tier1			33	0	0.00	11	4	26.67
WDFY1	0	genome.wustl.edu	37	2	224759012	224759012	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	224759012	224759012	A	G	SNP	WDFY1	ENST00000233055	human	ensembl	74_37	-1	known	missense	c.770	p.L257P	0.999	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_Znf_FYVE,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,smart_WD40_repeat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDFY1	HGNC	ENSG00000085449				52	0	0.00	38	4	9.52
WDR48	0	genome.wustl.edu	37	3	39116253	39116253	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	3	39116253	39116253	T	C	SNP	WDR48	ENST00000302313	human	ensembl	74_37	+1	known	missense	c.709	p.W237R	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_DUF3337,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR48	HGNC	ENSG00000114742	tier1	-	-	68	0	0.00	54	4	6.90
WDR72	0	genome.wustl.edu	37	15	53908282	53908282	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	15	53908282	53908282	G	T	SNP	WDR72	ENST00000360509	human	ensembl	74_37	-1	known	missense	c.2121	p.F707L	0.023	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR72	HGNC	ENSG00000166415				55	0	0.00	29	3	9.38
XIRP2	0	genome.wustl.edu	37	2	168103321	168103321	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	2	168103321	168103321	G	T	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	missense	c.5419	p.D1807Y	1.000	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092	tier1	-	-	24	0	0.00	22	4	15.38
XKR7	0	genome.wustl.edu	37	20	30584967	30584967	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	20	30584967	30584967	G	T	SNP	XKR7	ENST00000562532	human	ensembl	74_37	+1	known	nonsense	c.1447	p.E483*	1.000	NULL	pfam_Transport_prot_XK	-	no_errors	XKR7	HGNC	ENSG00000260903				34	0	0.00	46	3	6.12
XRRA1	0	genome.wustl.edu	37	11	74651896	74651896	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	74651896	74651896	C	-	DEL	XRRA1	ENST00000340360	human	ensembl	74_37	-1	known	frame_shift_del	c.28	p.D10fs	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	XRRA1	HGNC	ENSG00000166435	tier1			49	0	0.00	15	2	11.76
ZFC3H1	0	genome.wustl.edu	37	12	72057007	72057007	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	12	72057007	72057007	A	T	SNP	ZFC3H1	ENST00000378743	human	ensembl	74_37	-1	known	missense	c.384	p.S128R	1.000	NULL	pfam_Putative_zinc-finger_domain,smart_HAT,pfscan_TPR-contain_dom	-	no_errors	ZFC3H1	HGNC	ENSG00000133858	tier1	-	-	62	0	0.00	94	33	25.98
ZNF175	0	genome.wustl.edu	37	19	52090051	52090051	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	52090051	52090051	T	C	SNP	ZNF175	ENST00000262259	human	ensembl	74_37	+1	known	missense	c.467	p.M156T	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF175	HGNC	ENSG00000105497	tier1	-	-	39	0	0.00	28	14	33.33
ZNF215	0	genome.wustl.edu	37	11	6977317	6977317	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	11	6977317	6977317	A	-	DEL	ZNF215	ENST00000278319	human	ensembl	74_37	+1	known	frame_shift_del	c.1109	p.S372fs	0.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF215	HGNC	ENSG00000149054	tier1			32	0	0.00	24	3	11.11
ZNF442	0	genome.wustl.edu	37	19	12461334	12461334	+	Silent	SNP	C	C	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	12461334	12461334	C	A	SNP	ZNF442	ENST00000242804	human	ensembl	74_37	-1	known	silent	c.1065	p.G355	0.995	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF442	HGNC	ENSG00000198342	tier1	-	-	104	0	0.00	78	5	6.02
ZNF525	0	genome.wustl.edu	37	19	53885241	53885241	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	53885241	53885241	G	T	SNP	ZNF525	ENST00000355326	human	ensembl	74_37	+1	known	missense	c.563	p.G188V	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF525	HGNC	ENSG00000203326	tier1	-	-	50	0	0.00	37	12	24.49
ZNF577	0	genome.wustl.edu	37	19	52364182	52364182	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	52364182	52364182	G	T	SNP	ZNF577	ENST00000412216	human	ensembl	74_37	-1	putative	missense	c.333	p.S111R	0.106	NULL	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF577	HGNC	ENSG00000161551	tier1	-	-	39	0	0.00	34	4	10.53
ZNF729	0	genome.wustl.edu	37	19	22499671	22499671	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	22499671	22499671	A	C	SNP	ZNF729	ENST00000601693	human	ensembl	74_37	+1	novel	missense	c.3452	p.K1151T	0.009	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF729	HGNC	ENSG00000196350	tier1	-	-	39	0	0.00	25	8	24.24
ZNF732	0	genome.wustl.edu	37	4	265860	265860	+	Silent	SNP	G	G	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	4	265860	265860	G	T	SNP	ZNF732	ENST00000419098	human	ensembl	74_37	-1	known	silent	c.786	p.S262	0.001	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF732	HGNC	ENSG00000186777	tier1	-	-	46	0	0.00	22	23	51.11
ZNF829	0	genome.wustl.edu	37	19	37382913	37382913	+	Silent	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	37382913	37382913	T	C	SNP	ZNF829	ENST00000520965	human	ensembl	74_37	-1	known	silent	c.1023	p.R341	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF829	HGNC	ENSG00000185869	tier1	-	-	55	0	0.00	54	5	8.47
ZNF829	0	genome.wustl.edu	37	19	37382962	37382962	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	37382962	37382962	T	A	SNP	ZNF829	ENST00000520965	human	ensembl	74_37	-1	known	missense	c.974	p.E325V	0.356	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF829	HGNC	ENSG00000185869	tier1	-	-	63	0	0.00	43	4	8.33
ZNF829	0	genome.wustl.edu	37	19	37382964	37382964	+	Silent	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	37382964	37382964	C	T	SNP	ZNF829	ENST00000520965	human	ensembl	74_37	-1	known	silent	c.972	p.K324	0.066	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF829	HGNC	ENSG00000185869	tier1	-	-	62	0	0.00	44	4	8.33
ZNF99	0	genome.wustl.edu	37	19	22941667	22941667	+	Silent	SNP	T	T	C			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	19	22941667	22941667	T	C	SNP	ZNF99	ENST00000397104	human	ensembl	74_37	-1	known	silent	c.771	p.K257	0.014	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF99	HGNC	ENSG00000213973	tier1	rs199672066	-	85	0	0.00	59	9	13.24
ZSWIM7	0	genome.wustl.edu	37	17	15890599	15890599	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NF-01A-11D-A37C-09	TCGA-L5-A8NF-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	344221f6-4b8a-46e4-885b-b2e2205529f2	6c3798fb-7b20-4c5c-9d02-492c8d972ec2	17	15890599	15890599	C	T	SNP	ZSWIM7	ENST00000399277	human	ensembl	74_37	-1	known	missense	c.182	p.S61N	1.000	NULL	pfam_Znf_SWIM,pfscan_Znf_SWIM	-	no_errors	ZSWIM7	HGNC	ENSG00000214941	tier1	-	-	49	0	0.00	51	4	7.27
