Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA13	0	genome.wustl.edu	37	7	48311788	48311788	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	48311788	48311788	T	A	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	missense	c.2525	p.I842N	0.281	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	tier1	-	-	78	0	0.00	45	4	8.16
ABCB9	0	genome.wustl.edu	37	12	123434423	123434423	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	123434423	123434423	T	C	SNP	ABCB9	ENST00000442028	human	ensembl	74_37	-1	known	missense	c.759	p.I253M	0.733	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB9	HGNC	ENSG00000150967	tier1	-	-	63	0	0.00	20	5	20.00
ABCD4	0	genome.wustl.edu	37	14	74759556	74759556	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	14	74759556	74759556	A	-	DEL	ABCD4	ENST00000356924	human	ensembl	74_37	-1	known	frame_shift_del	c.831	p.F277fs	0.998	pfam_ABC_Peroxi_TM,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_Peroxi_TM,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCD4	HGNC	ENSG00000119688	tier1			25	0	0.00	7	2	22.22
ABHD12B	0	genome.wustl.edu	37	14	51347290	51347290	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	14	51347290	51347290	G	T	SNP	ABHD12B	ENST00000337334	human	ensembl	74_37	+1	known	splice_site	c.455+1	e4+1	1.000	-	-	-	no_errors	ABHD12B	HGNC	ENSG00000131969	tier1	-	-	51	0	0.00	19	3	13.64
ACHE	0	genome.wustl.edu	37	7	100490296	100490296	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	100490296	100490296	C	T	SNP	ACHE	ENST00000302913	human	ensembl	74_37	-1	known	silent	c.1212	p.L404	0.998	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	ACHE	HGNC	ENSG00000087085	tier1	-	-	99	0	0.00	49	8	14.04
ACOT12	0	genome.wustl.edu	37	5	80643707	80643707	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	5	80643707	80643707	C	T	SNP	ACOT12	ENST00000307624	human	ensembl	74_37	-1	known	missense	c.539	p.G180D	0.011	NULL	pfam_Thioestr_supf,pfam_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	-	no_errors	ACOT12	HGNC	ENSG00000172497				85	0	0.00	15	2	11.76
ACTL6B	0	genome.wustl.edu	37	7	100253447	100253447	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	100253447	100253447	G	A	SNP	ACTL6B	ENST00000160382	human	ensembl	74_37	-1	known	silent	c.81	p.Y27	0.998	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL6B	HGNC	ENSG00000077080	tier1	-	-	85	0	0.00	42	4	8.70
ACTRT3	0	genome.wustl.edu	37	3	169485221	169485221	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	3	169485221	169485221	C	T	SNP	ACTRT3	ENST00000330368	human	ensembl	74_37	-1	known	silent	c.1118	p.*373	1.000	NULL	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT3	HGNC	ENSG00000184378	tier1	-	-	29	0	0.00	8	4	33.33
ADAM29	0	genome.wustl.edu	37	4	175897795	175897795	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	4	175897795	175897795	T	G	SNP	ADAM29	ENST00000359240	human	ensembl	74_37	+1	known	missense	c.1119	p.D373E	0.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM29	HGNC	ENSG00000168594				33	0	0.00	5	2	28.57
ADCY8	0	genome.wustl.edu	37	8	131833649	131833649	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	8	131833649	131833649	T	A	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	missense	c.2693	p.K898M	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897	tier1	-	-	60	0	0.00	24	3	11.11
ADRBK2	0	genome.wustl.edu	37	22	26074809	26074809	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	22	26074809	26074809	A	C	SNP	ADRBK2	ENST00000324198	human	ensembl	74_37	+1	known	missense	c.674	p.K225T	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	ADRBK2	HGNC	ENSG00000100077	tier1	-	-	35	0	0.00	13	5	27.78
ADRM1	0	genome.wustl.edu	37	20	60882437	60882437	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	20	60882437	60882437	G	A	SNP	ADRM1	ENST00000253003	human	ensembl	74_37	+1	known	silent	c.552	p.G184	1.000	pfam_26S_Psome_Ubiquitin-recp_Rpn13	pfam_26S_Psome_Ubiquitin-recp_Rpn13	-	no_errors	ADRM1	HGNC	ENSG00000130706	tier1	-	-	137	0	0.00	85	8	8.60
AFF2	0	genome.wustl.edu	37	X	148039913	148039913	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	148039913	148039913	A	T	SNP	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	missense	c.2615	p.E872V	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966	tier1	-	-	46	0	0.00	14	3	17.65
AGL	0	genome.wustl.edu	37	1	100335979	100335979	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	100335979	100335979	G	A	SNP	AGL	ENST00000294724	human	ensembl	74_37	+1	known	missense	c.688	p.E230K	0.954	superfamily_Glycoside_hydrolase_SF,tigrfam_Glycogen_debranch_met	pfam_AGL/Gdb1,superfamily_6-hairpin_glycosidase-like,superfamily_Glycoside_hydrolase_SF,tigrfam_Glycogen_debranch_met	-	no_errors	AGL	HGNC	ENSG00000162688	tier1	-	-	46	0	0.00	19	6	24.00
AGPS	0	genome.wustl.edu	37	2	178299116	178299116	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	178299116	178299116	G	C	SNP	AGPS	ENST00000264167	human	ensembl	74_37	+1	known	missense	c.412	p.V138L	1.000	NULL	pfam_FAD-linked_oxidase_C,pfam_Oxid_FAD_bind_N,superfamily_FAD-bd_2,superfamily_FAD-linked_Oxase-like_C	-	no_errors	AGPS	HGNC	ENSG00000018510	tier1	-	-	103	0	0.00	41	5	10.87
AHI1	0	genome.wustl.edu	37	6	135787092	135787092	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	135787092	135787092	C	A	SNP	AHI1	ENST00000265602	human	ensembl	74_37	-1	known	missense	c.609	p.E203D	1.000	NULL	pfam_WD40_repeat,pfam_SH3_domain,pfam_SH3_2,superfamily_WD40_repeat_dom,superfamily_SH3_domain,smart_WD40_repeat,smart_SH3_domain,pfscan_SH3_domain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_SH3_domain	-	no_errors	AHI1	HGNC	ENSG00000135541	tier1	-	-	107	0	0.00	39	5	11.36
AHNAK	0	genome.wustl.edu	37	11	62293282	62293282	+	Silent	SNP	A	A	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	62293282	62293282	A	T	SNP	AHNAK	ENST00000378024	human	ensembl	74_37	-1	known	silent	c.8607	p.V2869	0.948	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK	HGNC	ENSG00000124942	tier1	-	-	118	0	0.00	40	18	31.03
AHNAK2	0	genome.wustl.edu	37	14	105408919	105408919	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	14	105408919	105408919	T	G	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.12869	p.D4290A	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	tier1	-	-	175	0	0.00	89	11	11.00
ALOX5	0	genome.wustl.edu	37	10	45941110	45941110	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	45941110	45941110	G	A	SNP	ALOX5	ENST00000374391	human	ensembl	74_37	+1	known	missense	c.2000	p.R667Q	1.000	superfamily_LipOase_C	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,prints_LipOase_mml,prints_LipOase_C,pfscan_PLAT/LH2_dom	-	no_errors	ALOX5	HGNC	ENSG00000012779	tier1	-	-	26	0	0.00	11	3	21.43
ALPP	0	genome.wustl.edu	37	2	233243909	233243909	+	Splice_Site	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	233243909	233243909	G	A	SNP	ALPP	ENST00000392027	human	ensembl	74_37	+1	known	splice_site	c.194-1	e3-1	1.000	-	-	-	no_errors	ALPP	HGNC	ENSG00000163283	tier1	rs150492331	-	92	0	0.00	28	7	20.00
ANKRD30A	0	genome.wustl.edu	37	10	37421265	37421265	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	37421265	37421265	A	C	SNP	ANKRD30A	ENST00000361713	human	ensembl	74_37	+1	known	missense	c.440	p.K147T	0.001	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30A	HGNC	ENSG00000148513	tier1	-	-	71	0	0.00	17	9	34.62
ANKRD33B	0	genome.wustl.edu	37	5	10649794	10649794	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	5	10649794	10649794	C	T	SNP	ANKRD33B	ENST00000296657	human	ensembl	74_37	+1	novel	missense	c.1054	p.R352W	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD33B	HGNC	ENSG00000164236	tier1	-	-	65	0	0.00	55	4	6.78
ANKS4B	0	genome.wustl.edu	37	16	21261759	21261759	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	16	21261759	21261759	A	T	SNP	ANKS4B	ENST00000311620	human	ensembl	74_37	+1	known	missense	c.872	p.K291M	0.525	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKS4B	HGNC	ENSG00000175311				49	0	0.00	34	2	5.56
ANO2	0	genome.wustl.edu	37	12	5685120	5685120	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	5685120	5685120	C	T	SNP	ANO2	ENST00000356134	human	ensembl	74_37	-1	known	missense	c.2504	p.S835N	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO2	HGNC	ENSG00000047617	tier1	-	-	64	0	0.00	45	4	8.16
ANP32A	0	genome.wustl.edu	37	15	69072347	69072347	+	RNA	DEL	G	G	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	15	69072347	69072347	G	-	DEL	ANP32A	ENST00000267918	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ANP32A	HGNC	ENSG00000140350	tier1			53	0	0.00	19	4	17.39
APBB1IP	0	genome.wustl.edu	37	10	26856357	26856357	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	26856357	26856357	G	A	SNP	APBB1IP	ENST00000376236	human	ensembl	74_37	+1	known	silent	c.1941	p.E647	0.999	NULL	pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Ras-assoc	-	no_errors	APBB1IP	HGNC	ENSG00000077420	tier1	-	-	36	0	0.00	25	4	13.79
APLF	0	genome.wustl.edu	37	2	68765198	68765198	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	68765198	68765198	C	T	SNP	APLF	ENST00000303795	human	ensembl	74_37	+1	known	silent	c.999	p.G333	0.190	NULL	pfam_Znf_C2H2_APLF-like,superfamily_SMAD_FHA_domain	-	no_errors	APLF	HGNC	ENSG00000169621	tier1	-	-	43	0	0.00	12	11	47.83
AQP3	0	genome.wustl.edu	37	9	33441179	33441180	+	RNA	INS	-	-	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	33441179	33441180	-	T	INS	AQP3	ENST00000493581	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.018	-	-	-	no_errors	AQP3	HGNC	ENSG00000165272	tier1			78	0	0.00	39	12	23.53
ARHGEF7	0	genome.wustl.edu	37	13	111862249	111862249	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	13	111862249	111862249	C	T	SNP	ARHGEF7	ENST00000375741	human	ensembl	74_37	+1	known	missense	c.431	p.A144V	1.000	superfamily_CH-domain	pfam_DH-domain,pfam_SH3_2,pfam_SH3_domain,pfam_Pleckstrin_homology,pfam_CH-domain,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain,prints_SH3_domain	-	no_errors	ARHGEF7	HGNC	ENSG00000102606				134	0	0.00	51	3	5.56
ARMC4	0	genome.wustl.edu	37	10	28151508	28151508	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	28151508	28151508	A	G	SNP	ARMC4	ENST00000305242	human	ensembl	74_37	-1	known	missense	c.2654	p.L885P	1.000	superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,superfamily_GSKIP_dom,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC4	HGNC	ENSG00000169126	tier1	-	-	67	0	0.00	34	13	27.66
ASXL2	0	genome.wustl.edu	37	2	26101061	26101061	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	26101061	26101061	T	A	SNP	ASXL2	ENST00000435504	human	ensembl	74_37	-1	known	missense	c.31	p.R11W	1.000	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL2	HGNC	ENSG00000143970	tier1	-	-	132	0	0.00	50	7	12.28
ATP10A	0	genome.wustl.edu	37	15	25947173	25947173	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	15	25947173	25947173	G	T	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	missense	c.2650	p.Q884K	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190	tier1	-	-	106	0	0.00	38	4	9.30
ATP10A	0	genome.wustl.edu	37	15	25959185	25959185	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	15	25959185	25959185	C	A	SNP	ATP10A	ENST00000356865	human	ensembl	74_37	-1	known	missense	c.1980	p.Q660H	0.000	superfamily_HAD-like_dom	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10A	HGNC	ENSG00000206190	tier1	-	-	120	0	0.00	44	14	24.14
ATP4A	0	genome.wustl.edu	37	19	36050028	36050028	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	36050028	36050028	C	T	SNP	ATP4A	ENST00000262623	human	ensembl	74_37	-1	known	silent	c.1122	p.A374	0.987	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATPase_P-typ_H/K-transp_N,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP4A	HGNC	ENSG00000105675	tier1	-	-	46	0	0.00	14	4	22.22
ATP8A1	0	genome.wustl.edu	37	4	42467002	42467002	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	4	42467002	42467002	C	T	SNP	ATP8A1	ENST00000381668	human	ensembl	74_37	-1	known	missense	c.2416	p.V806I	1.000	superfamily_HAD-like_dom,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8A1	HGNC	ENSG00000124406	tier1	-	-	52	0	0.00	11	3	21.43
BDNF	0	genome.wustl.edu	37	11	27679499	27679499	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	27679499	27679499	T	G	SNP	BDNF	ENST00000438929	human	ensembl	74_37	-1	known	missense	c.859	p.N287H	1.000	pfam_Nerve_growth_factor-rel,smart_Nerve_growth_factor-rel,pfscan_Nerve_growth_factor-rel,prints_Nerve_growth_factor-rel	pfam_Nerve_growth_factor-rel,smart_Nerve_growth_factor-rel,pfscan_Nerve_growth_factor-rel,prints_Brain-der_neurotrophic_factor,prints_Nerve_growth_factor-rel	-	no_errors	BDNF	HGNC	ENSG00000176697	tier1	-	-	18	0	0.00	6	5	45.45
BICC1	0	genome.wustl.edu	37	10	60562850	60562850	+	Silent	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	60562850	60562850	T	C	SNP	BICC1	ENST00000373886	human	ensembl	74_37	+1	known	silent	c.2029	p.L677	0.949	NULL	pfam_KH_dom_type_1,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_KH_dom,smart_SAM,pfscan_SAM,pfscan_KH_dom_type_1	-	no_errors	BICC1	HGNC	ENSG00000122870	tier1	-	-	36	0	0.00	18	7	28.00
BRD4	0	genome.wustl.edu	37	19	15355177	15355177	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	15355177	15355177	C	T	SNP	BRD4	ENST00000263377	human	ensembl	74_37	-1	known	missense	c.2446	p.V816I	0.997	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD4	HGNC	ENSG00000141867	tier1	-	-	96	0	0.00	52	5	8.77
BTN1A1	0	genome.wustl.edu	37	6	26509198	26509198	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	26509198	26509198	C	T	SNP	BTN1A1	ENST00000244513	human	ensembl	74_37	+1	known	silent	c.1377	p.F459	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Ig_V-set,pfam_CD80_C2-set,superfamily_ConA-like_lec_gl_sf,smart_Ig_sub,smart_Ig_V-set_subgr,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Ig-like_dom,prints_Butyrophylin	-	no_errors	BTN1A1	HGNC	ENSG00000124557				64	0	0.00	24	3	11.11
C10orf112	0	genome.wustl.edu	37	10	19493862	19493862	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	19493862	19493862	A	C	SNP	C10orf112	ENST00000454679	human	ensembl	74_37	+1	known	missense	c.134	p.E45A	1.000	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,pfscan_MAM_dom	pfam_MAM_dom,pfam_LDrepeatLR_classA_rpt,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_MAM_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,prints_LDrepeatLR_classA_rpt,prints_MAM_dom	-	no_errors	C10orf112	HGNC	ENSG00000204740	tier1	-	-	66	0	0.00	35	5	12.50
C12orf76	0	genome.wustl.edu	37	12	110511298	110511301	+	RNA	DEL	TTTG	TTTG	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	TTTG	TTTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	110511298	110511301	TTTG	-	DEL	C12orf76	ENST00000548936	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.969:0.995:0.998:0.997	-	-	-	no_errors	C12orf76	HGNC	ENSG00000174456	tier1			94	0	0.00	31	11	26.19
C14orf177	0	genome.wustl.edu	37	14	99183561	99183561	+	Silent	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	14	99183561	99183561	A	C	SNP	C14orf177	ENST00000325812	human	ensembl	74_37	+1	known	silent	c.328	p.R110	0.000	NULL	NULL	-	no_errors	C14orf177	HGNC	ENSG00000176605	tier1	-	-	52	0	0.00	25	11	30.56
C1orf173	0	genome.wustl.edu	37	1	75102058	75102058	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	75102058	75102058	G	A	SNP	C1orf173	ENST00000326665	human	ensembl	74_37	-1	known	missense	c.509	p.P170L	0.568	NULL	NULL	-	no_errors	C1orf173	HGNC	ENSG00000178965	tier1	-	-	107	0	0.00	37	8	17.78
C2orf69	0	genome.wustl.edu	37	2	200790063	200790063	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	200790063	200790063	G	C	SNP	C2orf69	ENST00000319974	human	ensembl	74_37	+1	known	missense	c.612	p.K204N	0.923	pfam_UPF0565	pfam_UPF0565	-	no_errors	C2orf69	HGNC	ENSG00000178074	tier1	-	-	73	0	0.00	33	4	10.81
C4B	0	genome.wustl.edu	37	6	31997689	31997689	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	31997689	31997689	C	A	SNP	C4B	ENST00000435363	human	ensembl	74_37	+1	known	missense	c.3941	p.A1314D	0.093	pfam_A2M_comp,superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_A2M_comp,pfam_A-macroglobulin_rcpt-bd,pfam_Macroglobln_a2,pfam_A2M_N_2,pfam_Netrin_module_non-TIMP,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,superfamily_TIMP-like_OB-fold,superfamily_Anaphylatoxin_comp_syst,superfamily_Invasin/intimin_cell_adhesion,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain,prints_Anaphylatoxn_comp_syst_dom	-	no_errors	C4B	HGNC	ENSG00000224389	tier1	-	-	26	0	0.00	12	8	40.00
C6orf118	0	genome.wustl.edu	37	6	165695343	165695343	+	RNA	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	165695343	165695343	A	C	SNP	C6orf118	ENST00000491176	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C6orf118	HGNC	ENSG00000112539	tier1	-	-	29	0	0.00	7	5	41.67
CACNA1G	0	genome.wustl.edu	37	17	48695481	48695481	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	48695481	48695481	G	A	SNP	CACNA1G	ENST00000359106	human	ensembl	74_37	+1	known	missense	c.5299	p.D1767N	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1G	HGNC	ENSG00000006283	tier1	-	-	70	0	0.00	48	49	50.52
CACNA2D1	0	genome.wustl.edu	37	7	81593645	81593645	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	81593645	81593645	T	A	SNP	CACNA2D1	ENST00000356253	human	ensembl	74_37	-1	known	missense	c.2641	p.S881C	0.980	NULL	pfam_VDCC_a2/dsu,pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D1	HGNC	ENSG00000153956	tier1	-	-	43	0	0.00	13	6	31.58
CACNB1	0	genome.wustl.edu	37	17	37331544	37331544	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	37331544	37331544	G	A	SNP	CACNB1	ENST00000394303	human	ensembl	74_37	-1	known	missense	c.1699	p.R567W	1.000	NULL	pfam_GK/Ca_channel_bsu,pfam_VDCC_L_bsu,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_SH3_domain,prints_VDCC_L_bsu,prints_VDCC_L_b1su	-	no_errors	CACNB1	HGNC	ENSG00000067191				44	0	0.00	19	3	13.64
CAMSAP3	0	genome.wustl.edu	37	19	7682863	7682863	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	7682863	7682863	G	A	SNP	CAMSAP3	ENST00000446248	human	ensembl	74_37	+1	known	missense	c.3751	p.D1251N	1.000	pfam_CKK_domain,superfamily_PRC_barrel-like	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP3	HGNC	ENSG00000076826				90	0	0.00	38	2	5.00
CAMTA1	0	genome.wustl.edu	37	1	7724522	7724522	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	7724522	7724522	G	A	SNP	CAMTA1	ENST00000303635	human	ensembl	74_37	+1	known	missense	c.1915	p.G639R	0.965	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA1	HGNC	ENSG00000171735	tier1	-	-	93	0	0.00	43	5	10.42
CAPN9	0	genome.wustl.edu	37	1	230883352	230883352	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	230883352	230883352	T	G	SNP	CAPN9	ENST00000271971	human	ensembl	74_37	+1	known	missense	c.110	p.L37R	1.000	smart_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_EF_hand_dom,prints_Calpain_cysteine_protease,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat	-	no_errors	CAPN9	HGNC	ENSG00000135773	tier1	-	-	152	0	0.00	41	21	33.33
CASS4	0	genome.wustl.edu	37	20	55012496	55012496	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	20	55012496	55012496	C	T	SNP	CASS4	ENST00000360314	human	ensembl	74_37	+1	known	missense	c.313	p.R105C	0.000	NULL	pfam_Serine_rich,pfam_CAS_DUF3513,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	CASS4	HGNC	ENSG00000087589				45	0	0.00	32	2	5.88
CCDC109B	0	genome.wustl.edu	37	4	110606475	110606475	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	4	110606475	110606475	G	A	SNP	CCDC109B	ENST00000394650	human	ensembl	74_37	+1	known	silent	c.885	p.Q295	0.000	pfam_Coiled-coil-dom_prot_109_C	pfam_Coiled-coil-dom_prot_109_C	-	no_errors	CCDC109B	HGNC	ENSG00000005059	tier1	-	-	46	0	0.00	18	3	14.29
CCDC149	0	genome.wustl.edu	37	4	24839867	24839867	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	4	24839867	24839867	T	-	DEL	CCDC149	ENST00000504487	human	ensembl	74_37	-1	known	frame_shift_del	c.400	p.R134fs	0.999	pfam_Coiled-coil_dom-contain_pr_149	pfam_Coiled-coil_dom-contain_pr_149	-	no_errors	CCDC149	HGNC	ENSG00000181982	tier1			55	0	0.00	10	2	16.67
CCDC169	0	genome.wustl.edu	37	13	36801276	36801276	+	RNA	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	13	36801276	36801276	T	C	SNP	CCDC169	ENST00000479850	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.210	-	-	-	no_errors	CCDC169	HGNC	ENSG00000242715	tier1	-	-	40	0	0.00	11	6	35.29
CCDC180	0	genome.wustl.edu	37	9	100077198	100077198	+	Silent	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	100077198	100077198	A	G	SNP	CCDC180	ENST00000375202	human	ensembl	74_37	+1	known	silent	c.897	p.E299	0.485	NULL	NULL	-	no_errors	CCDC180	HGNC	ENSG00000197816	tier1	-	-	23	0	0.00	10	6	37.50
CCDC73	0	genome.wustl.edu	37	11	32635921	32635921	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	32635921	32635921	C	A	SNP	CCDC73	ENST00000335185	human	ensembl	74_37	-1	known	missense	c.1943	p.R648L	0.025	NULL	NULL	-	no_errors	CCDC73	HGNC	ENSG00000186714				70	0	0.00	33	2	5.71
CCDC74B	0	genome.wustl.edu	37	2	130902262	130902262	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	130902262	130902262	G	A	SNP	CCDC74B	ENST00000409128	human	ensembl	74_37	-1	putative	missense	c.308	p.P103L	0.001	NULL	NULL	-	no_errors	CCDC74B	HGNC	ENSG00000152076	tier1	-	-	72	0	0.00	28	14	33.33
CCDC88C	0	genome.wustl.edu	37	14	91739932	91739932	+	Silent	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	14	91739932	91739932	G	T	SNP	CCDC88C	ENST00000389857	human	ensembl	74_37	-1	known	silent	c.5124	p.A1708	0.264	NULL	pfam_Hook-related_fam,superfamily_Prefoldin,superfamily_Fum_Rdtase/Succ_DH_flav-like_C	-	no_errors	CCDC88C	HGNC	ENSG00000015133	tier1	-	-	89	0	0.00	36	4	10.00
CDK6	0	genome.wustl.edu	37	7	92244497	92244497	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	92244497	92244497	T	A	SNP	CDK6	ENST00000265734	human	ensembl	74_37	-1	known	missense	c.938	p.H313L	0.713	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK6	HGNC	ENSG00000105810	tier1	-	-	48	0	0.00	17	3	15.00
CDK7	0	genome.wustl.edu	37	5	68565057	68565057	+	Silent	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	5	68565057	68565057	A	G	SNP	CDK7	ENST00000256443	human	ensembl	74_37	+1	known	silent	c.651	p.S217	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK7	HGNC	ENSG00000134058	tier1	-	-	83	0	0.00	23	4	14.81
CDKN2A	0	genome.wustl.edu	37	9	21970901	21970901	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	21970901	21970901	C	T	SNP	CDKN2A	ENST00000446177	human	ensembl	74_37	-1	known	missense	c.457	p.E153K	0.995	superfamily_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CDKN2A	HGNC	ENSG00000147889	tier1	rs45476696	-	74	0	0.00	20	12	37.50
CENPN	0	genome.wustl.edu	37	16	81058368	81058368	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	16	81058368	81058368	G	T	SNP	CENPN	ENST00000393335	human	ensembl	74_37	+1	putative	nonsense	c.682	p.G228*	0.526	pfam_Chl4/mis15/CENP-N	pfam_Chl4/mis15/CENP-N	-	no_errors	CENPN	HGNC	ENSG00000166451	tier1	-	-	88	0	0.00	36	4	10.00
CEP85L	0	genome.wustl.edu	37	6	118953622	118953622	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	118953622	118953622	C	T	SNP	CEP85L	ENST00000368488	human	ensembl	74_37	-1	known	missense	c.235	p.V79M	0.996	NULL	NULL	-	no_errors	CEP85L	HGNC	ENSG00000111860				59	0	0.00	23	4	14.81
CES1	0	genome.wustl.edu	37	16	55854390	55854390	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	16	55854390	55854390	A	C	SNP	CES1	ENST00000360526	human	ensembl	74_37	-1	known	missense	c.695	p.V232G	0.200	pfam_CarbesteraseB,pfam_AB_hydrolase_3	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES1	HGNC	ENSG00000198848	tier1	-	-	113	0	0.00	51	8	13.56
CHD3	0	genome.wustl.edu	37	17	7796665	7796665	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	7796665	7796665	G	C	SNP	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	missense	c.571	p.A191P	1.000	pfam_CHD_N,superfamily_HMG_box_dom	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004	tier1	-	-	85	0	0.00	28	6	17.65
CLASP2	0	genome.wustl.edu	37	3	33543245	33543245	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	3	33543245	33543245	C	G	SNP	CLASP2	ENST00000399362	human	ensembl	74_37	-1	known	missense	c.4354	p.E1452Q	1.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	CLASP2	HGNC	ENSG00000163539				44	0	0.00	28	3	9.68
CLEC12B	0	genome.wustl.edu	37	12	10167210	10167210	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	10167210	10167210	C	T	SNP	CLEC12B	ENST00000338896	human	ensembl	74_37	+1	known	silent	c.279	p.S93	0.400	pfam_Ly49	pfam_C-type_lectin,pfam_Ly49,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC12B	HGNC	ENSG00000256660	tier1	-	-	42	0	0.00	20	6	23.08
CNTN5	0	genome.wustl.edu	37	11	100061873	100061873	+	Silent	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	100061873	100061873	A	G	SNP	CNTN5	ENST00000279463	human	ensembl	74_37	+1	known	silent	c.1596	p.P532	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN5	HGNC	ENSG00000149972	tier1	-	-	113	0	0.00	60	4	6.25
CNTN6	0	genome.wustl.edu	37	3	1425020	1425020	+	Silent	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	3	1425020	1425020	T	C	SNP	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	silent	c.2445	p.S815	0.932	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115	tier1	-	-	91	0	0.00	50	8	13.79
CNTNAP5	0	genome.wustl.edu	37	2	125204470	125204470	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	125204470	125204470	T	G	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	missense	c.874	p.F292V	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052	tier1	-	-	43	0	0.00	17	6	26.09
COL2A1	0	genome.wustl.edu	37	12	48367888	48367888	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	48367888	48367888	A	-	DEL	COL2A1	ENST00000380518	human	ensembl	74_37	-1	known	frame_shift_del	c.4301	p.L1434fs	1.000	pfam_Fib_collagen_C,smart_Fib_collagen_C	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL2A1	HGNC	ENSG00000139219	tier1			39	0	0.00	7	2	22.22
COL6A6	0	genome.wustl.edu	37	3	130287171	130287171	+	Silent	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	3	130287171	130287171	G	T	SNP	COL6A6	ENST00000358511	human	ensembl	74_37	+1	known	silent	c.2124	p.V708	0.909	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A6	HGNC	ENSG00000206384	tier1	-	-	45	0	0.00	17	3	15.00
COPS7A	0	genome.wustl.edu	37	12	6838513	6838513	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	6838513	6838513	G	A	SNP	COPS7A	ENST00000229251	human	ensembl	74_37	+1	known	missense	c.428	p.G143D	1.000	pfam_PCI_dom,smart_PCI_dom	pfam_PCI_dom,smart_PCI_dom	-	no_errors	COPS7A	HGNC	ENSG00000111652	tier1	-	-	52	0	0.00	34	4	10.53
CPQ	0	genome.wustl.edu	37	8	97797433	97797433	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	8	97797433	97797433	T	G	SNP	CPQ	ENST00000220763	human	ensembl	74_37	+1	known	missense	c.308	p.V103G	0.979	NULL	pfam_Peptidase_M28,pfam_Peptidase_M20	-	no_errors	CPQ	HGNC	ENSG00000104324	tier1	-	-	47	0	0.00	18	6	25.00
CPXM2	0	genome.wustl.edu	37	10	125472815	125472815	+	RNA	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	125472815	125472815	T	G	SNP	CPXM2	ENST00000368854	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CPXM2	HGNC	ENSG00000121898	tier1	-	-	51	0	0.00	17	7	29.17
CRAT	0	genome.wustl.edu	37	9	131862207	131862207	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	131862207	131862207	G	A	SNP	CRAT	ENST00000318080	human	ensembl	74_37	-1	known	silent	c.1023	p.Y341	0.306	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CRAT	HGNC	ENSG00000095321				53	0	0.00	31	3	8.82
CRELD1	0	genome.wustl.edu	37	3	9979713	9979713	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	3	9979713	9979713	C	T	SNP	CRELD1	ENST00000326434	human	ensembl	74_37	+1	known	missense	c.383	p.P128L	0.999	superfamily_Growth_fac_rcpt_N_dom	pfam_DUF3456,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_Furin_repeat,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	CRELD1	HGNC	ENSG00000163703	tier1	-	-	54	0	0.00	17	15	46.88
CRYL1	0	genome.wustl.edu	37	13	20987431	20987431	+	Silent	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	13	20987431	20987431	G	C	SNP	CRYL1	ENST00000298248	human	ensembl	74_37	-1	known	silent	c.729	p.L243	1.000	pfam_3HC_DH_C,superfamily_6-PGluconate_DH_C-like	pfam_3-OHacyl-CoA_DH_NAD-bd,pfam_3HC_DH_C,superfamily_6-PGluconate_DH_C-like	-	no_errors	CRYL1	HGNC	ENSG00000165475	tier1	-	-	56	0	0.00	27	5	15.15
CSMD2	0	genome.wustl.edu	37	1	34076780	34076780	+	Silent	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	34076780	34076780	G	T	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	silent	c.6204	p.P2068	0.108	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904				36	0	0.00	19	2	9.52
CTSO	0	genome.wustl.edu	37	4	156849542	156849542	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	4	156849542	156849542	T	C	SNP	CTSO	ENST00000433477	human	ensembl	74_37	-1	known	missense	c.877	p.S293G	0.007	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C	pfam_Peptidase_C1A_C,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSO	HGNC	ENSG00000256043	tier1	-	-	105	0	0.00	25	11	30.56
CXADRP3	0	genome.wustl.edu	37	18	14479007	14479007	+	RNA	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	18	14479007	14479007	A	C	SNP	CXADRP3	ENST00000581457	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	CXADRP3	HGNC	ENSG00000265766	tier1	-	-	52	0	0.00	9	9	47.37
CYP2C18	0	genome.wustl.edu	37	10	96447929	96447929	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	96447929	96447929	T	C	SNP	CYP2C18	ENST00000285979	human	ensembl	74_37	+1	known	missense	c.379	p.C127R	0.826	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2C18	HGNC	ENSG00000108242	tier1	-	-	121	0	0.00	40	6	12.50
DAAM2	0	genome.wustl.edu	37	6	39832802	39832802	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	39832802	39832802	A	G	SNP	DAAM2	ENST00000274867	human	ensembl	74_37	+1	known	missense	c.380	p.N127S	1.000	pfam_GTPase-bd,superfamily_ARM-type_fold	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DAAM2	HGNC	ENSG00000146122	tier1	-	-	44	0	0.00	46	5	9.80
DCC	0	genome.wustl.edu	37	18	50936959	50936959	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	18	50936959	50936959	C	T	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	nonsense	c.3073	p.R1025*	0.998	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323				75	0	0.00	26	2	7.14
DCDC1	0	genome.wustl.edu	37	11	31312305	31312305	+	Silent	SNP	A	A	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	31312305	31312305	A	T	SNP	DCDC1	ENST00000452803	human	ensembl	74_37	-1	known	silent	c.849	p.S283	0.035	NULL	pfscan_Doublecortin_dom	-	no_errors	DCDC1	HGNC	ENSG00000170959	tier1	-	-	91	0	0.00	31	7	18.42
DEFB119	0	genome.wustl.edu	37	20	29976958	29976958	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	20	29976958	29976958	C	T	SNP	DEFB119	ENST00000376315	human	ensembl	74_37	-1	known	missense	c.137	p.R46H	0.156	superfamily_Scorpion_toxin-like	superfamily_Scorpion_toxin-like	-	no_errors	DEFB119	HGNC	ENSG00000180483				76	0	0.00	38	2	5.00
DGKI	0	genome.wustl.edu	37	7	137092657	137092657	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	137092657	137092657	C	T	SNP	DGKI	ENST00000288490	human	ensembl	74_37	-1	known	missense	c.2908	p.G970S	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DGKI	HGNC	ENSG00000157680				83	0	0.00	46	3	6.12
DLGAP2	0	genome.wustl.edu	37	8	1624706	1624706	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	8	1624706	1624706	C	T	SNP	DLGAP2	ENST00000421627	human	ensembl	74_37	+1	known	missense	c.1970	p.T657M	1.000	pfam_GKAP	pfam_GKAP	-	no_errors	DLGAP2	HGNC	ENSG00000198010	tier1	-	-	26	0	0.00	15	5	25.00
DNAH12	0	genome.wustl.edu	37	3	57357587	57357587	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	3	57357587	57357587	G	T	SNP	DNAH12	ENST00000351747	human	ensembl	74_37	-1	known	missense	c.7435	p.P2479T	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH12	HGNC	ENSG00000174844	tier1	-	-	110	0	0.00	48	4	7.69
DNAH8	0	genome.wustl.edu	37	6	38794124	38794124	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	38794124	38794124	G	A	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	missense	c.3389	p.R1130H	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721				69	0	0.00	36	2	5.26
DNAI1	0	genome.wustl.edu	37	9	34491532	34491532	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	34491532	34491532	T	G	SNP	DNAI1	ENST00000242317	human	ensembl	74_37	+1	known	missense	c.661	p.F221V	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DNAI1	HGNC	ENSG00000122735	tier1	-	-	114	0	0.00	74	9	10.84
DNM1P47	0	genome.wustl.edu	37	15	102304950	102304950	+	RNA	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	15	102304950	102304950	G	C	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1	-	-	62	0	0.00	22	4	15.38
DNM1P47	0	genome.wustl.edu	37	15	102304970	102304970	+	RNA	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	15	102304970	102304970	G	A	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1	-	-	67	0	0.00	21	4	16.00
DOCK2	0	genome.wustl.edu	37	5	169435601	169435601	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	5	169435601	169435601	A	C	SNP	DOCK2	ENST00000256935	human	ensembl	74_37	+1	known	missense	c.3173	p.K1058T	1.000	superfamily_ARM-type_fold,superfamily_Ferritin-like_SF	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Cyt_c-like_dom,superfamily_ARM-type_fold,superfamily_Ferritin-like_SF,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK2	HGNC	ENSG00000134516	tier1	-	-	62	0	0.00	17	9	34.62
DOCK8	0	genome.wustl.edu	37	9	422084	422084	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	422084	422084	G	T	SNP	DOCK8	ENST00000453981	human	ensembl	74_37	+1	known	missense	c.4190	p.R1397I	1.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,superfamily_ARM-type_fold	-	no_errors	DOCK8	HGNC	ENSG00000107099	tier1	-	-	36	0	0.00	9	3	25.00
DPP10	0	genome.wustl.edu	37	2	116594126	116594126	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	116594126	116594126	A	C	SNP	DPP10	ENST00000393147	human	ensembl	74_37	+1	known	missense	c.2106	p.E702D	0.998	pfam_Peptidase_S9	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	DPP10	HGNC	ENSG00000175497	tier1	-	-	44	0	0.00	20	5	20.00
DTWD1	0	genome.wustl.edu	37	15	49917567	49917567	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	15	49917567	49917567	A	C	SNP	DTWD1	ENST00000251250	human	ensembl	74_37	+1	known	missense	c.203	p.Y68S	1.000	pfam_DTW	pfam_DTW	-	no_errors	DTWD1	HGNC	ENSG00000104047	tier1	-	-	160	0	0.00	56	9	13.43
EDF1	0	genome.wustl.edu	37	9	139757385	139757385	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	139757385	139757385	C	T	SNP	EDF1	ENST00000224073	human	ensembl	74_37	-1	known	missense	c.358	p.V120M	1.000	pfam_Cro/C1-type_HTH,superfamily_Lambda_DNA-bd_dom,smart_Cro/C1-type_HTH,pfscan_Cro/C1-type_HTH	pfam_MBF1_N,pfam_Cro/C1-type_HTH,superfamily_Lambda_DNA-bd_dom,smart_Cro/C1-type_HTH,pfscan_Cro/C1-type_HTH	-	no_errors	EDF1	HGNC	ENSG00000107223	tier1	-	-	70	0	0.00	35	4	10.26
EFHB	0	genome.wustl.edu	37	3	19975259	19975259	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	3	19975259	19975259	C	A	SNP	EFHB	ENST00000295824	human	ensembl	74_37	-1	known	missense	c.252	p.M84I	0.000	NULL	pfam_SPARC/Testican_Ca-bd-dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	EFHB	HGNC	ENSG00000163576				82	0	0.00	33	2	5.71
EFR3A	0	genome.wustl.edu	37	8	132958779	132958779	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	8	132958779	132958779	C	T	SNP	EFR3A	ENST00000254624	human	ensembl	74_37	+1	known	missense	c.265	p.H89Y	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	EFR3A	HGNC	ENSG00000132294	tier1	-	-	77	0	0.00	29	4	12.12
ELMO1	0	genome.wustl.edu	37	7	37243802	37243802	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	37243802	37243802	T	C	SNP	ELMO1	ENST00000341056	human	ensembl	74_37	-1	known	missense	c.104	p.K35R	0.007	NULL	pfam_Engulfment_cell_motility_ELMO	-	no_errors	ELMO1	HGNC	ENSG00000155849	tier1	-	-	24	0	0.00	8	7	46.67
EMD	0	genome.wustl.edu	37	X	153609157	153609157	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	153609157	153609157	G	T	SNP	EMD	ENST00000369842	human	ensembl	74_37	+1	known	missense	c.444	p.K148N	0.001	NULL	pfam_LEM_dom,superfamily_LEM/LEM-like_dom,smart_LEM_dom,pfscan_LEM_dom	-	no_errors	EMD	HGNC	ENSG00000102119	tier1	-	-	35	0	0.00	17	3	15.00
ENSG00000219926	0	genome.wustl.edu	37	13	64414146	64414146	+	RNA	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	13	64414146	64414146	G	A	SNP	ENSG00000219926	ENST00000607822	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-394A14.2	Clone_based_vega_gene	ENSG00000219926				14	0	0.00	6	3	33.33
ENSG00000221388	0	genome.wustl.edu	37	2	213628386	213628386	+	RNA	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	213628386	213628386	T	C	SNP	ENSG00000221388	ENST00000408461	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.004	-	-	-	no_errors	AC093865.1	Clone_based_ensembl_gene	ENSG00000221388	tier1	-	-	30	0	0.00	6	4	40.00
ENSG00000223231	0	genome.wustl.edu	37	1	84259637	84259638	+	RNA	INS	-	-	AA			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	84259637	84259638	-	AA	INS	ENSG00000223231	ENST00000411299	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.082:0.062	-	-	-	no_errors	AL035706.1	Clone_based_ensembl_gene	ENSG00000223231	tier1			67	0	0.00	30	5	14.29
ENSG00000241358	0	genome.wustl.edu	37	3	146113558	146113558	+	RNA	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	3	146113558	146113558	T	G	SNP	ENSG00000241358	ENST00000490344	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.801	-	-	-	no_errors	RP11-758I14.3	Clone_based_vega_gene	ENSG00000241358	tier1	-	-	123	0	0.00	40	11	21.57
ENSG00000254506	0	genome.wustl.edu	37	11	101465073	101465073	+	RNA	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	101465073	101465073	C	T	SNP	ENSG00000254506	ENST00000527374	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.874	-	-	-	no_errors	RP11-748H22.1	Clone_based_vega_gene	ENSG00000254506	tier1	-	-	54	0	0.00	18	8	30.77
ENSG00000258352	0	genome.wustl.edu	37	12	47529650	47529650	+	RNA	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	47529650	47529650	G	A	SNP	ENSG00000258352	ENST00000548463	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	RP11-23J18.1	Clone_based_vega_gene	ENSG00000258352	tier1	-	-	18	0	0.00	7	3	30.00
ENSG00000263756	0	genome.wustl.edu	37	6	32940349	32940349	+	RNA	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	32940349	32940349	C	T	SNP	ENSG00000263756	ENST00000580587	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	XXbac-BPG181M17.6	Clone_based_vega_gene	ENSG00000263756	tier1	-	-	97	0	0.00	41	13	24.07
ENTHD1	0	genome.wustl.edu	37	22	40231918	40231918	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	22	40231918	40231918	A	T	SNP	ENTHD1	ENST00000325157	human	ensembl	74_37	-1	known	missense	c.638	p.V213D	0.000	NULL	pfam_Epsin_dom_N,pfam_VHS,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	-	no_errors	ENTHD1	HGNC	ENSG00000176177				87	0	0.00	38	2	5.00
EPB41L4A	0	genome.wustl.edu	37	5	111494139	111494139	+	RNA	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	5	111494139	111494139	C	A	SNP	EPB41L4A	ENST00000507810	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EPB41L4A	HGNC	ENSG00000129595	tier1	-	-	89	0	0.00	16	6	27.27
EPHA1	0	genome.wustl.edu	37	7	143087602	143087602	+	RNA	DEL	G	G	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	143087602	143087602	G	-	DEL	EPHA1	ENST00000458129	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	EPHA1	HGNC	ENSG00000146904	tier1			49	0	0.00	29	2	6.45
ERC2	0	genome.wustl.edu	37	3	55543970	55543970	+	RNA	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	3	55543970	55543970	A	C	SNP	ERC2	ENST00000484530	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ERC2	HGNC	ENSG00000187672	tier1	-	-	60	0	0.00	9	7	43.75
ESX1	0	genome.wustl.edu	37	X	103498837	103498837	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	103498837	103498837	C	T	SNP	ESX1	ENST00000372588	human	ensembl	74_37	-1	known	silent	c.504	p.A168	0.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_POU	-	no_errors	ESX1	HGNC	ENSG00000123576	tier1	-	-	87	0	0.00	49	5	9.26
ETNK2	0	genome.wustl.edu	37	1	204106375	204106375	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	204106375	204106375	C	T	SNP	ETNK2	ENST00000367201	human	ensembl	74_37	-1	known	missense	c.871	p.V291M	1.000	superfamily_Kinase-like_dom	pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom	-	no_errors	ETNK2	HGNC	ENSG00000143845				36	0	0.00	29	2	6.45
FAM120C	0	genome.wustl.edu	37	X	54117833	54117833	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	54117833	54117833	C	T	SNP	FAM120C	ENST00000375180	human	ensembl	74_37	-1	known	missense	c.2339	p.R780Q	1.000	NULL	NULL	-	no_errors	FAM120C	HGNC	ENSG00000184083	tier1	-	-	42	0	0.00	14	3	17.65
FAM13A	0	genome.wustl.edu	37	4	89708959	89708959	+	Nonsense_Mutation	SNP	T	T	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	4	89708959	89708959	T	A	SNP	FAM13A	ENST00000264344	human	ensembl	74_37	-1	known	nonsense	c.1216	p.R406*	0.994	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	FAM13A	HGNC	ENSG00000138640	tier1	-	-	44	0	0.00	24	4	14.29
FAM13C	0	genome.wustl.edu	37	10	61122392	61122392	+	RNA	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	61122392	61122392	G	C	SNP	FAM13C	ENST00000470220	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.148	-	-	-	no_errors	FAM13C	HGNC	ENSG00000148541	tier1	-	-	27	0	0.00	11	7	38.89
FAM198B	0	genome.wustl.edu	37	4	159091900	159091900	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	4	159091900	159091900	C	T	SNP	FAM198B	ENST00000393807	human	ensembl	74_37	-1	known	missense	c.628	p.E210K	1.000	NULL	NULL	-	no_errors	FAM198B	HGNC	ENSG00000164125	tier1	-	-	39	0	0.00	14	4	22.22
FAM205A	0	genome.wustl.edu	37	9	34725945	34725945	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	34725945	34725945	T	C	SNP	FAM205A	ENST00000378788	human	ensembl	74_37	-1	novel	missense	c.1292	p.Q431R	0.998	NULL	NULL	-	no_errors	FAM205A	HGNC	ENSG00000205108	tier1	-	-	43	0	0.00	12	10	45.45
FAM20B	0	genome.wustl.edu	37	1	179033624	179033624	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	179033624	179033624	G	T	SNP	FAM20B	ENST00000263733	human	ensembl	74_37	+1	known	missense	c.931	p.A311S	1.000	pfam_DUF1193	pfam_DUF1193	-	no_errors	FAM20B	HGNC	ENSG00000116199	tier1	-	-	45	0	0.00	26	4	13.33
FAM230B	0	genome.wustl.edu	37	22	21540899	21540899	+	RNA	DEL	T	T	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	22	21540899	21540899	T	-	DEL	FAM230B	ENST00000415376	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	FAM230B	HGNC	ENSG00000215498	tier1			20	0	0.00	3	2	40.00
FBXW9	0	genome.wustl.edu	37	19	12800370	12800370	+	Silent	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	12800370	12800370	A	G	SNP	FBXW9	ENST00000380339	human	ensembl	74_37	-1	known	silent	c.1311	p.T437	0.762	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW9	HGNC	ENSG00000132004	tier1	-	-	76	0	0.00	36	4	10.00
FDXR	0	genome.wustl.edu	37	17	72868242	72868242	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	72868242	72868242	G	T	SNP	FDXR	ENST00000581530	human	ensembl	74_37	-1	known	missense	c.96	p.F32L	0.957	NULL	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	-	no_errors	FDXR	HGNC	ENSG00000161513	tier1	-	-	33	0	0.00	5	9	64.29
FGF13	0	genome.wustl.edu	37	X	137939763	137939763	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	137939763	137939763	T	G	SNP	FGF13	ENST00000370603	human	ensembl	74_37	-1	known	missense	c.128	p.K43T	1.000	NULL	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam,prints_Fibroblast_GF_fam	-	no_errors	FGF13	HGNC	ENSG00000129682	tier1	-	-	18	0	0.00	4	8	66.67
FLG	0	genome.wustl.edu	37	1	152284192	152284192	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	152284192	152284192	G	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.3170	p.A1057E	0.000	pfam_Filaggrin,prints_Filaggrin	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	288	0	0.00	156	10	6.02
FMO1	0	genome.wustl.edu	37	1	171254716	171254716	+	RNA	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	171254716	171254716	G	A	SNP	FMO1	ENST00000469112	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	FMO1	HGNC	ENSG00000010932	tier1	-	-	45	0	0.00	21	8	26.67
FOXN1	0	genome.wustl.edu	37	17	26851857	26851857	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	26851857	26851857	C	T	SNP	FOXN1	ENST00000226247	human	ensembl	74_37	+1	known	missense	c.460	p.P154S	0.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXN1	HGNC	ENSG00000109101				88	0	0.00	35	2	5.41
FOXP2	0	genome.wustl.edu	37	7	114271582	114271582	+	Splice_Site	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	114271582	114271582	G	C	SNP	FOXP2	ENST00000408937	human	ensembl	74_37	+1	known	splice_site	c.673-1	e6-1	0.135	-	-	-	no_errors	FOXP2	HGNC	ENSG00000128573				46	0	0.00	25	2	7.41
FPGS	0	genome.wustl.edu	37	9	130566932	130566932	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	130566932	130566932	C	T	SNP	FPGS	ENST00000373247	human	ensembl	74_37	+1	known	silent	c.339	p.F113	1.000	superfamily_Mur_ligase_cen,tigrfam_Folylpolyglutamate_synth	superfamily_Mur_ligase_cen,superfamily_Mur_ligase_C,tigrfam_Folylpolyglutamate_synth	-	no_errors	FPGS	HGNC	ENSG00000136877				93	0	0.00	42	5	10.64
FREM2	0	genome.wustl.edu	37	13	39263254	39263254	+	Silent	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	13	39263254	39263254	A	G	SNP	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	silent	c.1773	p.S591	0.290	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	tier1	-	-	41	0	0.00	22	3	12.00
FXYD2	0	genome.wustl.edu	37	11	117688619	117688619	+	RNA	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	117688619	117688619	T	C	SNP	FXYD2	ENST00000514385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.964	-	-	-	no_errors	FXYD2	HGNC	ENSG00000137731	tier1	-	-	12	0	0.00	5	5	50.00
GALNT8	0	genome.wustl.edu	37	12	4870249	4870249	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	4870249	4870249	C	T	SNP	GALNT8	ENST00000252318	human	ensembl	74_37	+1	known	silent	c.1299	p.A433	0.891	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT8	HGNC	ENSG00000130035				32	0	0.00	11	3	21.43
GAPVD1	0	genome.wustl.edu	37	9	128094797	128094797	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	128094797	128094797	G	C	SNP	GAPVD1	ENST00000394105	human	ensembl	74_37	+1	known	missense	c.2317	p.A773P	1.000	NULL	pfam_RasGAP,pfam_VPS9,superfamily_Rho_GTPase_activation_prot,smart_VPS9_subgr,pfscan_VPS9,pfscan_RasGAP	-	no_errors	GAPVD1	HGNC	ENSG00000165219				47	0	0.00	11	2	15.38
GDE1	0	genome.wustl.edu	37	16	19522217	19522217	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	16	19522217	19522217	C	A	SNP	GDE1	ENST00000353258	human	ensembl	74_37	-1	known	nonsense	c.487	p.E163*	1.000	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors	GDE1	HGNC	ENSG00000006007				67	0	0.00	30	2	6.25
GH2	0	genome.wustl.edu	37	17	61958242	61958242	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	61958242	61958242	C	T	SNP	GH2	ENST00000332800	human	ensembl	74_37	-1	known	missense	c.346	p.V116M	0.885	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	GH2	HGNC	ENSG00000136487				93	0	0.00	44	4	8.33
GNAS	0	genome.wustl.edu	37	20	57430664	57430664	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	20	57430664	57430664	G	A	SNP	GNAS	ENST00000371099	human	ensembl	74_37	+1	putative	silent	c.2124	p.A708	1.000	NULL	NULL	-	no_errors	GNAS	HGNC	ENSG00000087460	tier1	-	-	83	0	0.00	39	14	26.42
GPR83	0	genome.wustl.edu	37	11	94113381	94113381	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	94113381	94113381	G	A	SNP	GPR83	ENST00000243673	human	ensembl	74_37	-1	known	silent	c.1206	p.P402	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	GPR83	HGNC	ENSG00000123901	tier1	-	-	56	0	0.00	21	5	19.23
GREB1	0	genome.wustl.edu	37	2	11765431	11765431	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	11765431	11765431	G	T	SNP	GREB1	ENST00000234142	human	ensembl	74_37	+1	known	missense	c.4299	p.K1433N	0.864	NULL	superfamily_P-loop_NTPase	-	no_errors	GREB1	HGNC	ENSG00000196208	tier1	-	-	53	0	0.00	17	4	19.05
GRID1	0	genome.wustl.edu	37	10	87407034	87407034	+	Silent	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	87407034	87407034	A	C	SNP	GRID1	ENST00000327946	human	ensembl	74_37	-1	known	silent	c.2118	p.A706	0.018	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID1	HGNC	ENSG00000182771	tier1	-	-	63	0	0.00	35	13	27.08
HAP1	0	genome.wustl.edu	37	17	39887793	39887793	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	39887793	39887793	G	C	SNP	HAP1	ENST00000310778	human	ensembl	74_37	-1	known	missense	c.1021	p.L341V	0.047	pfam_HAP1_N	pfam_HAP1_N	-	no_errors	HAP1	HGNC	ENSG00000173805	tier1	-	-	123	0	0.00	185	28	13.15
HDAC2	0	genome.wustl.edu	37	6	114277793	114277793	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	114277793	114277793	G	A	SNP	HDAC2	ENST00000398283	human	ensembl	74_37	-1	known	silent	c.630	p.G210	0.998	pfam_His_deacetylse_dom,prints_His_deacetylse_1	pfam_His_deacetylse_dom,prints_His_deacetylse_1,prints_His_deacetylse	-	no_errors	HDAC2	HGNC	ENSG00000196591				50	0	0.00	19	2	9.52
HEATR1	0	genome.wustl.edu	37	1	236749748	236749748	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	236749748	236749748	C	T	SNP	HEATR1	ENST00000366582	human	ensembl	74_37	-1	known	missense	c.1720	p.E574K	0.138	superfamily_ARM-type_fold	pfam_BP28_C_dom,pfam_U3snoRNP10,superfamily_ARM-type_fold	-	no_errors	HEATR1	HGNC	ENSG00000119285				23	0	0.00	20	2	9.09
HEATR5A	0	genome.wustl.edu	37	14	31855727	31855727	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	14	31855727	31855727	G	A	SNP	HEATR5A	ENST00000389961	human	ensembl	74_37	-1	known	missense	c.1226	p.A409V	0.894	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR5A	HGNC	ENSG00000129493	tier1	-	-	50	0	0.00	35	4	10.26
HIST1H3C	0	genome.wustl.edu	37	6	26045967	26045968	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	26045967	26045968	TG	-	DEL	HIST1H3C	ENST00000540144	human	ensembl	74_37	+1	known	frame_shift_del	c.329_330	p.C111fs	1.000:1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST1H3C	HGNC	ENSG00000196532	tier1			123	0	0.00	23	29	55.77
HMCN1	0	genome.wustl.edu	37	1	185878509	185878509	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	185878509	185878509	T	G	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.662	p.V221G	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	104	0	0.00	47	13	21.67
HOXB7	0	genome.wustl.edu	37	17	46685288	46685288	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	46685288	46685288	C	T	SNP	HOXB7	ENST00000239165	human	ensembl	74_37	-1	known	missense	c.570	p.M190I	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXB7	HGNC	ENSG00000260027				78	0	0.00	32	2	5.88
HRH3	0	genome.wustl.edu	37	20	60791867	60791867	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	20	60791867	60791867	G	A	SNP	HRH3	ENST00000317393	human	ensembl	74_37	-1	known	missense	c.533	p.S178F	0.996	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Histamine_H3_rcpt,prints_Musac_Ach_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Histamine_H3_rcpt,prints_GPCR_Rhodpsn,prints_Musac_Ach_rcpt	-	no_errors	HRH3	HGNC	ENSG00000101180	tier1	-	-	23	0	0.00	12	4	25.00
HS3ST3A1	0	genome.wustl.edu	37	17	13504307	13504307	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	13504307	13504307	T	C	SNP	HS3ST3A1	ENST00000284110	human	ensembl	74_37	-1	known	missense	c.140	p.Q47R	0.970	NULL	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST3A1	HGNC	ENSG00000153976				77	0	0.00	26	3	10.34
HSF2	0	genome.wustl.edu	37	6	122743317	122743317	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	122743317	122743317	G	T	SNP	HSF2	ENST00000368455	human	ensembl	74_37	+1	known	missense	c.704	p.G235V	1.000	pfam_Vert_HSTF_C	pfam_Vert_HSTF_C,pfam_HSF_DNA-bd,smart_HSF_DNA-bd,prints_HSF_DNA-bd	-	no_errors	HSF2	HGNC	ENSG00000025156	tier1	-	-	57	0	0.00	20	5	20.00
IGF1R	0	genome.wustl.edu	37	15	99467158	99467158	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	15	99467158	99467158	T	C	SNP	IGF1R	ENST00000268035	human	ensembl	74_37	+1	known	missense	c.2539	p.S847P	1.000	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	IGF1R	HGNC	ENSG00000140443	tier1	-	-	98	0	0.00	44	4	8.33
IGHMBP2	0	genome.wustl.edu	37	11	68673634	68673634	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	68673634	68673634	C	T	SNP	IGHMBP2	ENST00000255078	human	ensembl	74_37	+1	known	missense	c.184	p.R62W	0.976	tigrfam_DNA_helicase_put	pfam_R3H_ss-bd,pfam_Znf_AN1,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,smart_R3H_ss-bd,smart_Znf_AN1,pfscan_Znf_AN1,pfscan_R3H_ss-bd,tigrfam_DNA_helicase_put	-	no_errors	IGHMBP2	HGNC	ENSG00000132740	tier1	-	-	62	0	0.00	20	16	44.44
INADL	0	genome.wustl.edu	37	1	62349918	62349918	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	62349918	62349918	C	T	SNP	INADL	ENST00000371158	human	ensembl	74_37	+1	known	missense	c.2969	p.P990L	0.026	NULL	pfam_PDZ,pfam_L27_2,superfamily_PDZ,smart_L27,smart_PDZ,pfscan_L27,pfscan_PDZ	-	no_errors	INADL	HGNC	ENSG00000132849	tier1	-	-	68	0	0.00	29	4	12.12
INPP4A	0	genome.wustl.edu	37	2	99172091	99172091	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	99172091	99172091	C	T	SNP	INPP4A	ENST00000074304	human	ensembl	74_37	+1	known	missense	c.1657	p.R553W	1.000	NULL	superfamily_C2_dom	-	no_errors	INPP4A	HGNC	ENSG00000040933	tier1	-	-	63	0	0.00	30	4	11.76
INPP5D	0	genome.wustl.edu	37	2	234094499	234094499	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	234094499	234094499	G	T	SNP	INPP5D	ENST00000359570	human	ensembl	74_37	+1	known	missense	c.2250	p.K750N	1.000	NULL	pfam_Endo/exonuclease/phosphatase,pfam_SH2,superfamily_Endo/exonuclease/phosphatase,smart_SH2,smart_IPPc,pfscan_SH2,prints_SH2	-	no_errors	INPP5D	HGNC	ENSG00000168918	tier1	-	-	77	0	0.00	32	4	11.11
INSR	0	genome.wustl.edu	37	19	7168031	7168031	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	7168031	7168031	A	G	SNP	INSR	ENST00000302850	human	ensembl	74_37	-1	known	missense	c.1558	p.W520R	1.000	pirsf_Tyr_kinase_insulin-like_rcpt,superfamily_Fibronectin_type3,smart_Fibronectin_type3	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	INSR	HGNC	ENSG00000171105	tier1	-	-	71	0	0.00	22	4	15.38
IQCD	0	genome.wustl.edu	37	12	113645642	113645642	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	113645642	113645642	C	G	SNP	IQCD	ENST00000416617	human	ensembl	74_37	-1	known	missense	c.330	p.E110D	0.000	NULL	pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCD	HGNC	ENSG00000166578	tier1	-	-	40	0	0.00	13	3	18.75
ISX	0	genome.wustl.edu	37	22	35481479	35481479	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	22	35481479	35481479	G	A	SNP	ISX	ENST00000308700	human	ensembl	74_37	+1	known	silent	c.531	p.R177	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	ISX	HGNC	ENSG00000175329	tier1	-	-	37	0	0.00	14	3	17.65
ITIH2	0	genome.wustl.edu	37	10	7759658	7759658	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	7759658	7759658	C	T	SNP	ITIH2	ENST00000358415	human	ensembl	74_37	+1	known	silent	c.537	p.F179	0.999	pfam_VIT,smart_VIT	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH2	HGNC	ENSG00000151655				56	0	0.00	30	2	6.25
JRKL	0	genome.wustl.edu	37	11	96125281	96125281	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	96125281	96125281	G	T	SNP	JRKL	ENST00000332349	human	ensembl	74_37	+1	known	missense	c.1468	p.D490Y	1.000	NULL	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	JRKL	HGNC	ENSG00000183340	tier1	-	-	27	0	0.00	18	4	18.18
KCNG2	0	genome.wustl.edu	37	18	77659371	77659371	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	18	77659371	77659371	C	T	SNP	KCNG2	ENST00000316249	human	ensembl	74_37	+1	known	missense	c.956	p.A319V	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNG2	HGNC	ENSG00000178342	tier1	-	-	26	0	0.00	13	5	27.78
KCNJ12	0	genome.wustl.edu	37	17	21319751	21319751	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	21319751	21319751	A	C	SNP	KCNJ12	ENST00000331718	human	ensembl	74_37	+1	known	missense	c.1097	p.K366T	1.000	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185	tier1	-	-	113	0	0.00	44	13	22.81
KCNT2	0	genome.wustl.edu	37	1	196197421	196197421	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	196197421	196197421	T	A	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.3341	p.E1114V	0.991	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687	tier1	-	-	78	0	0.00	32	17	34.69
KCNT2	0	genome.wustl.edu	37	1	196577475	196577475	+	RNA	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	196577475	196577475	T	C	SNP	KCNT2	ENST00000610076	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KCNT2	HGNC	ENSG00000162687	tier1	-	-	58	0	0.00	13	6	30.00
KDM6A	0	genome.wustl.edu	37	X	44941852	44941852	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	44941852	44941852	A	T	SNP	KDM6A	ENST00000382899	human	ensembl	74_37	+1	known	missense	c.3197	p.D1066V	1.000	NULL	pfam_JmjC_dom,pfam_TPR_1,smart_TPR_repeat,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	KDM6A	HGNC	ENSG00000147050	tier1	-	-	80	0	0.00	42	7	14.29
KIAA0319	0	genome.wustl.edu	37	6	24566912	24566912	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	24566912	24566912	G	A	SNP	KIAA0319	ENST00000378214	human	ensembl	74_37	-1	known	silent	c.2205	p.S735	1.000	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_Fibronectin_type3,smart_PKD/Chitinase_dom	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_MANSC_N,smart_Fibronectin_type3,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319	HGNC	ENSG00000137261				49	0	0.00	16	3	15.79
KIAA1377	0	genome.wustl.edu	37	11	101833020	101833020	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	101833020	101833020	C	T	SNP	KIAA1377	ENST00000263468	human	ensembl	74_37	+1	known	silent	c.1254	p.S418	0.871	NULL	NULL	-	no_errors	KIAA1377	HGNC	ENSG00000110318	tier1	-	-	53	0	0.00	24	3	11.11
KIAA1614	0	genome.wustl.edu	37	1	180897674	180897674	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	180897674	180897674	C	T	SNP	KIAA1614	ENST00000367588	human	ensembl	74_37	+1	known	silent	c.1170	p.S390	1.000	NULL	NULL	-	no_errors	KIAA1614	HGNC	ENSG00000135835	tier1	-	-	74	0	0.00	46	4	8.00
KIF1B	0	genome.wustl.edu	37	1	10421049	10421049	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	10421049	10421049	G	T	SNP	KIF1B	ENST00000263934	human	ensembl	74_37	+1	known	missense	c.3980	p.R1327L	1.000	pfam_Kinesin-like	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523				58	0	0.00	21	2	8.70
KIT	0	genome.wustl.edu	37	4	55592080	55592080	+	Silent	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	4	55592080	55592080	G	T	SNP	KIT	ENST00000288135	human	ensembl	74_37	+1	known	silent	c.1404	p.P468	0.004	pirsf_Tyr_kinase_CSF1/PDGF_rcpt	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	KIT	HGNC	ENSG00000157404	tier1	-	-	43	0	0.00	16	4	20.00
KLF3	0	genome.wustl.edu	37	4	38696528	38696528	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	4	38696528	38696528	G	T	SNP	KLF3	ENST00000261438	human	ensembl	74_37	+1	known	splice_site	c.856+1	e4+1	1.000	-	-	-	no_errors	KLF3	HGNC	ENSG00000109787	tier1	-	-	83	0	0.00	22	4	15.38
KLHL8	0	genome.wustl.edu	37	4	88085157	88085157	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	4	88085157	88085157	C	A	SNP	KLHL8	ENST00000273963	human	ensembl	74_37	-1	known	missense	c.1612	p.A538S	1.000	pfam_Kelch_1,pfam_Kelch_2,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_Kelch_2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL8	HGNC	ENSG00000145332				69	0	0.00	25	2	7.41
KLK15	0	genome.wustl.edu	37	19	51330365	51330365	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	51330365	51330365	C	G	SNP	KLK15	ENST00000598239	human	ensembl	74_37	-1	known	missense	c.250	p.E84Q	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK15	HGNC	ENSG00000174562	tier1	-	-	58	0	0.00	30	5	14.29
KMT2C	0	genome.wustl.edu	37	7	151851097	151851097	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	151851097	151851097	C	A	SNP	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	nonsense	c.12445	p.E4149*	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609	tier1	-	-	47	0	0.00	27	7	20.59
KMT2E	0	genome.wustl.edu	37	7	104750965	104750965	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	104750965	104750965	C	-	DEL	KMT2E	ENST00000257745	human	ensembl	74_37	+1	known	frame_shift_del	c.3886	p.Q1296fs	1.000	NULL	pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_PHD-finger	-	no_errors	KMT2E	HGNC	ENSG00000005483	tier1			46	0	0.00	16	2	11.11
KPRP	0	genome.wustl.edu	37	1	152732632	152732632	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	152732632	152732632	A	G	SNP	KPRP	ENST00000368773	human	ensembl	74_37	+1	known	missense	c.568	p.S190G	0.001	NULL	NULL	-	no_errors	KPRP	HGNC	ENSG00000203786	tier1	-	-	65	0	0.00	30	5	14.29
KRT38	0	genome.wustl.edu	37	17	39597021	39597021	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	39597021	39597021	A	T	SNP	KRT38	ENST00000246646	human	ensembl	74_37	-1	known	missense	c.153	p.H51Q	0.000	NULL	pfam_IF,prints_Keratin_I	-	no_errors	KRT38	HGNC	ENSG00000171360				38	0	0.00	65	4	5.80
KRTAP10-9	0	genome.wustl.edu	37	21	46047294	46047294	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	21	46047294	46047294	C	T	SNP	KRTAP10-9	ENST00000397911	human	ensembl	74_37	+1	known	missense	c.206	p.S69L	0.001	NULL	NULL	-	no_errors	KRTAP10-9	HGNC	ENSG00000221837	tier1	-	-	257	0	0.00	84	7	7.69
KRTAP16-1	0	genome.wustl.edu	37	17	39464715	39464715	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	39464715	39464715	C	A	SNP	KRTAP16-1	ENST00000391352	human	ensembl	74_37	-1	known	missense	c.791	p.C264F	0.985	NULL	NULL	-	no_errors	KRTAP16-1	HGNC	ENSG00000212657	tier1	-	-	34	0	0.00	66	6	8.33
LAMA2	0	genome.wustl.edu	37	6	129380971	129380971	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	129380971	129380971	G	T	SNP	LAMA2	ENST00000421865	human	ensembl	74_37	+1	known	missense	c.326	p.W109L	1.000	pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,pfscan_Laminin_N	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_B_type_IV,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_t-SNARE,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA2	HGNC	ENSG00000196569	tier1	-	-	44	0	0.00	19	3	13.64
LAMB2	0	genome.wustl.edu	37	3	49168865	49168865	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	3	49168865	49168865	C	T	SNP	LAMB2	ENST00000305544	human	ensembl	74_37	-1	known	missense	c.659	p.R220H	1.000	pfam_Laminin_N,smart_Laminin_N,pfscan_Laminin_N	pfam_EGF_laminin,pfam_Laminin_N,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB2	HGNC	ENSG00000172037	tier1	-	-	51	0	0.00	19	4	17.39
LAMTOR2	0	genome.wustl.edu	37	1	156028130	156028130	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	156028130	156028130	G	T	SNP	LAMTOR2	ENST00000368305	human	ensembl	74_37	+1	known	nonsense	c.346	p.E116*	1.000	NULL	pfam_Dynein_light-rel,smart_Dynein_light-rel	-	no_errors	LAMTOR2	HGNC	ENSG00000116586				62	0	0.00	31	2	6.06
LAYN	0	genome.wustl.edu	37	11	111425943	111425943	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	111425943	111425943	G	A	SNP	LAYN	ENST00000375615	human	ensembl	74_37	+1	known	missense	c.610	p.E204K	0.358	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	LAYN	HGNC	ENSG00000204381				52	0	0.00	23	2	8.00
LCN9	0	genome.wustl.edu	37	9	138557718	138557718	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	138557718	138557718	T	C	SNP	LCN9	ENST00000277526	human	ensembl	74_37	+1	known	missense	c.487	p.S163P	0.000	superfamily_Calycin-like	pfam_Lipocln_cytosolic_FA-bd_dom,superfamily_Calycin-like,prints_Maj_urinary,prints_Odour-bd,prints_Blactoglobulin	-	no_errors	LCN9	HGNC	ENSG00000148386	tier1	-	-	48	0	0.00	15	6	28.57
LCP2	0	genome.wustl.edu	37	5	169702853	169702853	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	5	169702853	169702853	T	G	SNP	LCP2	ENST00000046794	human	ensembl	74_37	-1	known	missense	c.200	p.K67T	1.000	pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	pfam_SH2,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,smart_SH2,pfscan_SH2	-	no_errors	LCP2	HGNC	ENSG00000043462	tier1	-	-	88	0	0.00	26	14	35.00
LINC00478	0	genome.wustl.edu	37	21	17442878	17442878	+	RNA	SNP	C	C	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	21	17442878	17442878	C	G	SNP	LINC00478	ENST00000602935	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LINC00478	HGNC	ENSG00000215386	tier1	-	-	51	0	0.00	32	7	17.95
LINC00483	0	genome.wustl.edu	37	17	48844829	48844829	+	RNA	DEL	A	A	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	48844829	48844829	A	-	DEL	LINC00483	ENST00000419688	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.024	-	-	-	no_errors	LINC00483	HGNC	ENSG00000167117	tier1			30	0	0.00	37	2	5.13
LOC101927345	0	genome.wustl.edu	37	1	143391834	143391834	+	RNA	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	143391834	143391834	A	C	SNP	LOC101927345	ENST00000412492	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261	tier1	-	-	299	0	0.00	128	26	16.88
LOC101929010	0	genome.wustl.edu	37	20	1617995	1617995	+	RNA	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	20	1617995	1617995	A	C	SNP	LOC101929010	ENST00000437384	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.038	-	-	-	no_errors	RP11-77C3.3	Clone_based_vega_gene	ENSG00000237914	tier1	-	-	71	0	0.00	40	8	16.67
LOC101929232	0	genome.wustl.edu	37	15	29052118	29052118	+	RNA	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	15	29052118	29052118	C	T	SNP	LOC101929232	ENST00000562423	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.997	-	-	-	no_errors	RP11-578F21.12	Clone_based_vega_gene	ENSG00000261377	tier1	-	-	118	0	0.00	48	6	11.11
LOC440905	0	genome.wustl.edu	37	2	130748048	130748048	+	RNA	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	130748048	130748048	A	G	SNP	LOC440905	ENST00000440931	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	AC018865.8	Clone_based_vega_gene	ENSG00000180178	tier1	-	-	34	0	0.00	19	8	29.63
LRP1B	0	genome.wustl.edu	37	2	141130597	141130597	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	141130597	141130597	T	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.10748	p.D3583G	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	62	0	0.00	37	4	9.76
LRP2	0	genome.wustl.edu	37	2	170048427	170048427	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	170048427	170048427	C	T	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	missense	c.8947	p.D2983N	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479	tier1	-	-	70	0	0.00	21	6	22.22
LRRC37A2	0	genome.wustl.edu	37	17	44626071	44626071	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	44626071	44626071	G	T	SNP	LRRC37A2	ENST00000333412	human	ensembl	74_37	+1	known	missense	c.3566	p.R1189M	0.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC37A2	HGNC	ENSG00000238083	tier1	-	-	95	0	0.00	51	7	12.07
MAGEB5	0	genome.wustl.edu	37	X	26235707	26235707	+	Silent	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	26235707	26235707	T	C	SNP	MAGEB5	ENST00000379029	human	ensembl	74_37	+1	known	silent	c.289	p.L97	0.000	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEB5	HGNC	ENSG00000188408	tier1	-	-	21	0	0.00	7	8	53.33
MAGED1	0	genome.wustl.edu	37	X	51644891	51644891	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	51644891	51644891	C	T	SNP	MAGED1	ENST00000375695	human	ensembl	74_37	+1	known	silent	c.2370	p.F790	1.000	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGED1	HGNC	ENSG00000179222	tier1	-	-	35	0	0.00	9	15	62.50
MAGEE1	0	genome.wustl.edu	37	X	75650471	75650471	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	75650471	75650471	A	C	SNP	MAGEE1	ENST00000361470	human	ensembl	74_37	+1	known	missense	c.2148	p.E716D	0.085	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC	ENSG00000198934	tier1	-	-	31	0	0.00	5	4	44.44
MAGEE2	0	genome.wustl.edu	37	X	75004002	75004002	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	75004002	75004002	T	G	SNP	MAGEE2	ENST00000373359	human	ensembl	74_37	-1	known	missense	c.885	p.K295N	0.925	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE2	HGNC	ENSG00000186675	tier1	-	-	28	0	0.00	9	12	57.14
MAN2B1	0	genome.wustl.edu	37	19	12760229	12760229	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	12760229	12760229	G	A	SNP	MAN2B1	ENST00000456935	human	ensembl	74_37	-1	known	missense	c.2281	p.P761S	1.000	pfam_Glyco_hydro_38_C,superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2B1	HGNC	ENSG00000104774				47	0	0.00	31	3	8.82
MAOB	0	genome.wustl.edu	37	X	43702992	43702992	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	43702992	43702992	A	C	SNP	MAOB	ENST00000378069	human	ensembl	74_37	-1	known	missense	c.65	p.L22R	1.000	pfam_Amino_oxidase,pfam_FAD-dep_OxRdtase,pfam_FAD_bind_dom,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_mOase_FAD-bd,prints_Flavin_amine_oxidase	pfam_Amino_oxidase,pfam_FAD-dep_OxRdtase,pfam_FAD_bind_dom,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_mOase_FAD-bd,prints_Flavin_amine_oxidase	-	no_errors	MAOB	HGNC	ENSG00000069535	tier1	-	-	26	0	0.00	7	8	53.33
MAP3K12	0	genome.wustl.edu	37	12	53874997	53874997	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	53874997	53874997	G	A	SNP	MAP3K12	ENST00000267079	human	ensembl	74_37	-1	known	missense	c.2549	p.A850V	1.000	pirsf_MAP3K12_MAP3K13	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K12	HGNC	ENSG00000139625	tier1	-	-	80	0	0.00	59	4	6.25
MAP3K5	0	genome.wustl.edu	37	6	136882733	136882733	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	136882733	136882733	C	T	SNP	MAP3K5	ENST00000359015	human	ensembl	74_37	-1	known	missense	c.3925	p.E1309K	0.999	superfamily_SAM/pointed	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP3K5	HGNC	ENSG00000197442	tier1	-	-	53	0	0.00	10	3	23.08
MAP3K6	0	genome.wustl.edu	37	1	27682974	27682974	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	27682974	27682974	G	A	SNP	MAP3K6	ENST00000357582	human	ensembl	74_37	-1	known	missense	c.3542	p.A1181V	0.130	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K6	HGNC	ENSG00000142733	tier1	-	-	106	0	0.00	31	4	11.43
MCM9	0	genome.wustl.edu	37	6	119243248	119243248	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	119243248	119243248	G	T	SNP	MCM9	ENST00000316316	human	ensembl	74_37	-1	known	missense	c.625	p.Q209K	1.000	superfamily_NA-bd_OB-fold,smart_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,smart_AAA+_ATPase,prints_MCM_DNA-dep_ATPase,pfscan_MCM_DNA-dep_ATPase	-	no_errors	MCM9	HGNC	ENSG00000111877				37	0	0.00	26	2	7.14
MDGA2	0	genome.wustl.edu	37	14	47770715	47770715	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	14	47770715	47770715	A	G	SNP	MDGA2	ENST00000439988	human	ensembl	74_37	-1	known	missense	c.319	p.C107R	1.000	pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA2	Uniprot_gn	ENSG00000272781	tier1	-	-	30	0	0.00	19	3	13.64
MDN1	0	genome.wustl.edu	37	6	90388401	90388401	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	90388401	90388401	T	C	SNP	MDN1	ENST00000369393	human	ensembl	74_37	-1	known	missense	c.12329	p.E4110G	1.000	pirsf_Midasin	pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-3,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_AAA+_ATPase,smart_VWF_A,pirsf_Midasin,pfscan_VWF_A	-	no_errors	MDN1	HGNC	ENSG00000112159				88	0	0.00	38	4	9.52
MED14	0	genome.wustl.edu	37	X	40588605	40588606	+	RNA	INS	-	-	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	40588605	40588606	-	A	INS	MED14	ENST00000463072	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MED14	HGNC	ENSG00000180182	tier1			24	0	0.00	13	4	23.53
MFAP3L	0	genome.wustl.edu	37	4	170913139	170913139	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	4	170913139	170913139	C	A	SNP	MFAP3L	ENST00000361618	human	ensembl	74_37	-1	known	missense	c.620	p.R207L	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MFAP3L	HGNC	ENSG00000198948	tier1	-	-	35	0	0.00	10	6	37.50
MIR320B2	0	genome.wustl.edu	37	1	224444737	224444738	+	RNA	INS	-	-	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	224444737	224444738	-	T	INS	MIR320B2	ENST00000408479	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.014:0.020	-	-	-	no_errors	MIR320B2	HGNC	ENSG00000221406	tier1			87	0	0.00	23	3	11.54
MIR376C	0	genome.wustl.edu	37	14	101506034	101506034	+	RNA	DEL	G	G	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	14	101506034	101506034	G	-	DEL	MIR376C	ENST00000607441	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR376C	HGNC	ENSG00000271946	tier1			57	0	0.00	16	2	11.11
MKI67	0	genome.wustl.edu	37	10	129904470	129904470	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	129904470	129904470	C	T	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	silent	c.5634	p.K1878	0.000	pfam_K167R	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773	tier1	-	-	177	0	0.00	50	17	25.37
MKKS	0	genome.wustl.edu	37	20	10389433	10389433	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	20	10389433	10389433	G	T	SNP	MKKS	ENST00000347364	human	ensembl	74_37	-1	known	missense	c.1004	p.S335Y	0.990	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom	-	no_errors	MKKS	HGNC	ENSG00000125863	tier1	-	-	45	0	0.00	17	3	15.00
MKL2	0	genome.wustl.edu	37	16	14311020	14311020	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	16	14311020	14311020	G	T	SNP	MKL2	ENST00000341243	human	ensembl	74_37	+1	known	missense	c.357	p.M119I	1.000	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL2	HGNC	ENSG00000186260				48	0	0.00	29	2	6.45
MOCS3	0	genome.wustl.edu	37	20	49575380	49575380	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	20	49575380	49575380	A	G	SNP	MOCS3	ENST00000244051	human	ensembl	74_37	+1	known	missense	c.1	p.M1V	0.932	NULL	pfam_ThiF_NAD_FAD-bd,pfam_MoeZ_MoeB,pfam_Rhodanese-like_dom,superfamily_Molybdenum_cofac_synth_MoeB,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom	-	no_errors	MOCS3	HGNC	ENSG00000124217	tier1	-	-	18	0	0.00	10	10	50.00
MPDU1	0	genome.wustl.edu	37	17	7489092	7489092	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	7489092	7489092	G	A	SNP	MPDU1	ENST00000250124	human	ensembl	74_37	+1	known	missense	c.146	p.G49D	1.000	pirsf_MannP-dilichol_defect-1	smart_CTNS,pirsf_MannP-dilichol_defect-1	-	no_errors	MPDU1	HGNC	ENSG00000129255				102	0	0.00	57	3	5.00
MPHOSPH9	0	genome.wustl.edu	37	12	123645738	123645738	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	123645738	123645738	C	T	SNP	MPHOSPH9	ENST00000392425	human	ensembl	74_37	-1	known	missense	c.2870	p.R957Q	0.975	NULL	superfamily_Prefoldin	-	no_errors	MPHOSPH9	HGNC	ENSG00000051825	tier1	rs199553878	-	118	0	0.00	39	9	18.75
MRPS2	0	genome.wustl.edu	37	9	138395457	138395457	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	138395457	138395457	G	A	SNP	MRPS2	ENST00000241600	human	ensembl	74_37	+1	known	silent	c.369	p.T123	0.081	pfam_Ribosomal_S2,superfamily_Ribosomal_S2_flav_dom	pfam_Ribosomal_S2,superfamily_Ribosomal_S2_flav_dom,prints_Ribosomal_S2	-	no_errors	MRPS2	HGNC	ENSG00000122140	tier1	-	-	32	0	0.00	8	5	38.46
MTMR4	0	genome.wustl.edu	37	17	56584115	56584115	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	56584115	56584115	C	T	SNP	MTMR4	ENST00000323456	human	ensembl	74_37	-1	known	missense	c.980	p.C327Y	1.000	pfam_Myotubularin-like_Pase_dom	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_Tyr/Dual-sp_Pase	-	no_errors	MTMR4	HGNC	ENSG00000108389	tier1	-	-	30	0	0.00	23	4	14.81
MUC16	0	genome.wustl.edu	37	19	9059236	9059236	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	9059236	9059236	G	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.28210	p.P9404S	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				68	0	0.00	33	2	5.71
MUC6	0	genome.wustl.edu	37	11	1031851	1031853	+	In_Frame_Del	DEL	GAC	GAC	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	GAC	GAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	1031851	1031853	GAC	-	DEL	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	in_frame_del	c.318_316	p.V106in_frame_del	0.984:0.977:0.367	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956	tier1			78	0	0.00	26	10	27.78
MYEF2	0	genome.wustl.edu	37	15	48435245	48435245	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	15	48435245	48435245	T	G	SNP	MYEF2	ENST00000324324	human	ensembl	74_37	-1	known	missense	c.1663	p.K555Q	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	MYEF2	HGNC	ENSG00000104177	tier1	-	-	36	0	0.00	14	4	22.22
MYH3	0	genome.wustl.edu	37	17	10533220	10533220	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	10533220	10533220	T	C	SNP	MYH3	ENST00000226209	human	ensembl	74_37	-1	known	missense	c.5597	p.Q1866R	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH3	HGNC	ENSG00000109063	tier1	-	-	55	0	0.00	30	3	9.09
MYH3	0	genome.wustl.edu	37	17	10555795	10555795	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	10555795	10555795	A	-	DEL	MYH3	ENST00000226209	human	ensembl	74_37	-1	known	frame_shift_del	c.290	p.L97fs	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH3	HGNC	ENSG00000109063	tier1			73	0	0.00	17	2	10.53
MYO15A	0	genome.wustl.edu	37	17	18022798	18022798	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	18022798	18022798	C	T	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	silent	c.684	p.G228	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				11	0	0.00	6	3	33.33
MYO5A	0	genome.wustl.edu	37	15	52700308	52700308	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	15	52700308	52700308	G	T	SNP	MYO5A	ENST00000358212	human	ensembl	74_37	-1	known	missense	c.786	p.F262L	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Skp1_comp_dimer,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5A	HGNC	ENSG00000197535	tier1	-	-	48	0	0.00	18	3	14.29
MYO5B	0	genome.wustl.edu	37	18	47518679	47518679	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	18	47518679	47518679	C	T	SNP	MYO5B	ENST00000285039	human	ensembl	74_37	-1	known	silent	c.735	p.E245	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5B	HGNC	ENSG00000167306	tier1	-	-	101	0	0.00	47	9	16.07
NACA	0	genome.wustl.edu	37	12	57112579	57112579	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	57112579	57112579	G	C	SNP	NACA	ENST00000454682	human	ensembl	74_37	-1	known	missense	c.2735	p.S912C	0.001	NULL	pfam_Nas_poly-pep-assoc_cplx_dom,superfamily_UBA-like,pfscan_Nas_poly-pep-assoc_cplx_dom	-	no_errors	NACA	HGNC	ENSG00000196531	tier1	-	-	71	0	0.00	47	5	9.62
NCKAP5	0	genome.wustl.edu	37	2	133540288	133540288	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	133540288	133540288	T	C	SNP	NCKAP5	ENST00000317721	human	ensembl	74_37	-1	known	missense	c.4096	p.S1366G	0.996	NULL	NULL	-	no_errors	NCKAP5	HGNC	ENSG00000176771	tier1	-	-	35	0	0.00	9	6	40.00
NCOA1	0	genome.wustl.edu	37	2	24905949	24905949	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	24905949	24905949	G	A	SNP	NCOA1	ENST00000348332	human	ensembl	74_37	+1	known	missense	c.484	p.V162M	1.000	pfam_PAS_fold,superfamily_PAS,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS	pfam_DUF1518,pfam_SRC-1,pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA1	HGNC	ENSG00000084676				49	0	0.00	18	2	10.00
NCOA2	0	genome.wustl.edu	37	8	71053578	71053578	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	8	71053578	71053578	G	A	SNP	NCOA2	ENST00000452400	human	ensembl	74_37	-1	known	nonsense	c.2869	p.Q957*	0.991	pirsf_Nuclear_rcpt_coactivator	pfam_DUF1518,pfam_SRC-1,pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA2	HGNC	ENSG00000140396	tier1	-	-	39	0	0.00	22	9	29.03
NEGR1	0	genome.wustl.edu	37	1	72163744	72163744	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	72163744	72163744	G	A	SNP	NEGR1	ENST00000357731	human	ensembl	74_37	-1	known	missense	c.614	p.A205V	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	NEGR1	HGNC	ENSG00000172260	tier1	-	-	103	0	0.00	42	7	14.29
NELL1	0	genome.wustl.edu	37	11	20939754	20939754	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	20939754	20939754	C	G	SNP	NELL1	ENST00000357134	human	ensembl	74_37	+1	known	missense	c.630	p.I210M	1.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_EGF-like_Ca-bd_dom,pfam_VWF_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_VWC_out,smart_VWF_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	NELL1	HGNC	ENSG00000165973				43	0	0.00	25	3	10.34
NEUROD4	0	genome.wustl.edu	37	12	55421014	55421014	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	55421014	55421014	C	T	SNP	NEUROD4	ENST00000242994	human	ensembl	74_37	+1	known	missense	c.791	p.S264F	1.000	pfam_Neurogenic_DUF,pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	-	no_errors	NEUROD4	HGNC	ENSG00000123307				55	0	0.00	27	4	12.90
NLRP14	0	genome.wustl.edu	37	11	7071008	7071008	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	7071008	7071008	A	C	SNP	NLRP14	ENST00000299481	human	ensembl	74_37	+1	known	missense	c.2230	p.N744H	0.008	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP14	HGNC	ENSG00000158077				94	0	0.00	39	3	7.14
NPIPB5	0	genome.wustl.edu	37	16	22503048	22503048	+	RNA	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	16	22503048	22503048	C	T	SNP	NPIPB5	ENST00000415654	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NPIPB5	HGNC	ENSG00000243716	tier1	-	-	61	0	0.00	36	4	10.00
NRG2	0	genome.wustl.edu	37	5	139422030	139422030	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	5	139422030	139422030	T	C	SNP	NRG2	ENST00000545385	human	ensembl	74_37	-1	known	missense	c.625	p.T209A	1.000	NULL	pfam_Neuregulin_1_C,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_EG-like_dom,pfscan_Ig-like_dom	-	no_errors	NRG2	HGNC	ENSG00000158458				117	0	0.00	48	3	5.88
NUAK1	0	genome.wustl.edu	37	12	106466612	106466612	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	106466612	106466612	A	G	SNP	NUAK1	ENST00000261402	human	ensembl	74_37	-1	known	missense	c.589	p.F197L	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NUAK1	HGNC	ENSG00000074590	tier1	-	-	47	0	0.00	8	3	27.27
NUTM2G	0	genome.wustl.edu	37	9	99699643	99699643	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	99699643	99699643	G	C	SNP	NUTM2G	ENST00000372322	human	ensembl	74_37	+1	known	missense	c.1280	p.S427T	0.527	NULL	NULL	-	no_errors	NUTM2G	HGNC	ENSG00000188152	tier1	-	-	142	0	0.00	67	7	9.46
OGFOD1	0	genome.wustl.edu	37	16	56485558	56485558	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	16	56485558	56485558	G	A	SNP	OGFOD1	ENST00000566157	human	ensembl	74_37	+1	known	missense	c.34	p.A12T	0.014	NULL	pfam_Oxoglutarate/Fe-dep_Oase_C,smart_Pro_4_hyd_alph	-	no_errors	OGFOD1	HGNC	ENSG00000087263				70	0	0.00	31	3	8.82
OR10Q1	0	genome.wustl.edu	37	11	57995922	57995922	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	57995922	57995922	G	A	SNP	OR10Q1	ENST00000316770	human	ensembl	74_37	-1	known	silent	c.426	p.R142	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10Q1	HGNC	ENSG00000180475	tier1	-	-	37	0	0.00	23	4	14.81
OR10R2	0	genome.wustl.edu	37	1	158449953	158449953	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	158449953	158449953	G	-	DEL	OR10R2	ENST00000368152	human	ensembl	74_37	+1	known	frame_shift_del	c.286	p.V96fs	0.853	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10R2	HGNC	ENSG00000198965	tier1			54	0	0.00	16	2	11.11
OR2M5	0	genome.wustl.edu	37	1	248308866	248308866	+	Silent	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	248308866	248308866	A	G	SNP	OR2M5	ENST00000366476	human	ensembl	74_37	+1	known	silent	c.417	p.K139	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M5	HGNC	ENSG00000162727	tier1	-	-	175	0	0.00	61	27	30.68
OR4B1	0	genome.wustl.edu	37	11	48239132	48239132	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	48239132	48239132	G	A	SNP	OR4B1	ENST00000309562	human	ensembl	74_37	+1	known	missense	c.771	p.M257I	0.060	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4B1	HGNC	ENSG00000175619	tier1	-	-	69	0	0.00	19	7	26.92
OR4C16	0	genome.wustl.edu	37	11	55340455	55340455	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	55340455	55340455	T	G	SNP	OR4C16	ENST00000314634	human	ensembl	74_37	+1	known	missense	c.852	p.I284M	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C16	HGNC	ENSG00000181935	tier1	-	-	44	0	0.00	5	12	70.59
OR4N4	0	genome.wustl.edu	37	15	22382738	22382738	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	15	22382738	22382738	A	G	SNP	OR4N4	ENST00000328795	human	ensembl	74_37	+1	known	missense	c.266	p.K89R	0.944	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4N4	HGNC	ENSG00000183706				42	0	0.00	23	8	25.81
P2RY8	0	genome.wustl.edu	37	X	1584751	1584751	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	1584751	1584751	C	T	SNP	P2RY8	ENST00000381297	human	ensembl	74_37	-1	known	missense	c.701	p.R234H	0.886	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Protea_act_rcpt	-	no_errors	P2RY8	HGNC	ENSG00000182162	tier1	-	-	60	0	0.00	28	7	20.00
PAF1	0	genome.wustl.edu	37	19	39876775	39876775	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	39876775	39876775	G	A	SNP	PAF1	ENST00000595564	human	ensembl	74_37	-1	known	missense	c.1238	p.A413V	0.949	NULL	pfam_RNA_pol_II-assoc_Paf1	-	no_errors	PAF1	HGNC	ENSG00000006712	tier1	-	-	38	0	0.00	12	3	20.00
PAFAH1B3	0	genome.wustl.edu	37	19	42806151	42806151	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	42806151	42806151	T	G	SNP	PAFAH1B3	ENST00000262890	human	ensembl	74_37	-1	known	missense	c.119	p.E40A	1.000	NULL	NULL	-	no_errors	PAFAH1B3	HGNC	ENSG00000079462	tier1	-	-	70	0	0.00	32	6	15.79
PAPPA2	0	genome.wustl.edu	37	1	176564689	176564689	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	176564689	176564689	C	T	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	missense	c.1949	p.A650V	0.998	NULL	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	tier1	-	-	35	0	0.00	26	4	13.33
PAPPA2	0	genome.wustl.edu	37	1	176668488	176668488	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	176668488	176668488	A	G	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	missense	c.2999	p.D1000G	0.975	superfamily_Fibronectin_type3	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	tier1	-	-	60	0	0.00	21	4	16.00
PARP14	0	genome.wustl.edu	37	3	122433231	122433232	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	3	122433231	122433232	-	A	INS	PARP14	ENST00000474629	human	ensembl	74_37	+1	known	frame_shift_ins	c.3955_3956	p.N1322fs	1.000:0.974	pfam_Macro_dom,smart_Macro_dom,pfscan_Macro_dom	pfam_Macro_dom,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_WWE-dom,smart_Macro_dom,pfscan_Macro_dom,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP14	HGNC	ENSG00000173193	tier1			70	0	0.00	30	2	6.25
PCDHAC1	0	genome.wustl.edu	37	5	140306543	140306543	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	5	140306543	140306543	C	T	SNP	PCDHAC1	ENST00000253807	human	ensembl	74_37	+1	known	silent	c.66	p.L22	0.479	pfam_Cadherin_N,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHAC1	HGNC	ENSG00000248383	tier1	-	-	79	0	0.00	27	8	22.86
PCK2	0	genome.wustl.edu	37	14	24567713	24567713	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	14	24567713	24567713	A	G	SNP	PCK2	ENST00000216780	human	ensembl	74_37	+1	known	missense	c.490	p.M164V	1.000	pfam_PEP_carboxykinase_GTP,superfamily_PEP_carboxykinase_N,pirsf_PEP_carboxykinase_GTP	pfam_PEP_carboxykinase_GTP,superfamily_PEP_carboxykinase_N,pirsf_PEP_carboxykinase_GTP	-	no_errors	PCK2	HGNC	ENSG00000100889	tier1	-	-	47	0	0.00	9	3	25.00
PCLO	0	genome.wustl.edu	37	7	82595489	82595489	+	Silent	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	82595489	82595489	A	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	silent	c.3615	p.A1205	0.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	96	0	0.00	52	16	23.53
PCSK7	0	genome.wustl.edu	37	11	117078536	117078536	+	RNA	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	117078536	117078536	C	T	SNP	PCSK7	ENST00000533135	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PCSK7	HGNC	ENSG00000160613	tier1	-	-	162	0	0.00	62	14	18.42
PDE7A	0	genome.wustl.edu	37	8	66631622	66631622	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	8	66631622	66631622	C	T	SNP	PDE7A	ENST00000401827	human	ensembl	74_37	-1	known	nonsense	c.1352	p.W451*	1.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE7A	HGNC	ENSG00000205268	tier1	-	-	47	0	0.00	13	7	35.00
PDHA2	0	genome.wustl.edu	37	4	96761931	96761931	+	Silent	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	4	96761931	96761931	T	C	SNP	PDHA2	ENST00000295266	human	ensembl	74_37	+1	known	silent	c.630	p.A210	0.927	pfam_DH_E1,tigrfam_Pyrv_DH_E1_asu_subgrp-y	pfam_DH_E1,tigrfam_Pyrv_DH_E1_asu_subgrp-y	-	no_errors	PDHA2	HGNC	ENSG00000163114	tier1	-	-	77	0	0.00	24	6	19.35
PDHX	0	genome.wustl.edu	37	11	34953026	34953026	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	34953026	34953026	A	G	SNP	PDHX	ENST00000227868	human	ensembl	74_37	+1	known	missense	c.236	p.K79R	1.000	pfam_Biotin_lipoyl,superfamily_Single_hybrid_motif,pfscan_Biotin_lipoyl	pfam_2-oxoacid_DH_actylTfrase,pfam_Biotin_lipoyl,pfam_E3-bd,superfamily_Single_hybrid_motif,superfamily_E3-bd,pfscan_Biotin_lipoyl	-	no_errors	PDHX	HGNC	ENSG00000110435	tier1	-	-	60	0	0.00	23	3	11.54
PGM3	0	genome.wustl.edu	37	6	83900566	83900566	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	83900566	83900566	T	C	SNP	PGM3	ENST00000513973	human	ensembl	74_37	-1	known	missense	c.166	p.T56A	0.972	pfam_A-D-PHexomutase_a/b/a-I,pirsf_PAGM	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-II,pfam_A-D-PHexomutase_C,superfamily_A-D-PHexomutase_a/b/a-I/II/III,pirsf_PAGM	-	no_errors	PGM3	HGNC	ENSG00000013375	tier1	-	-	100	0	0.00	48	4	7.69
PKD1	0	genome.wustl.edu	37	16	2140000	2140000	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	16	2140000	2140000	G	A	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	missense	c.12640	p.R4214C	0.993	NULL	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710	tier1	-	-	66	0	0.00	22	4	15.38
PLD4	0	genome.wustl.edu	37	14	105395191	105395191	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	14	105395191	105395191	G	T	SNP	PLD4	ENST00000392593	human	ensembl	74_37	+1	known	missense	c.390	p.Q130H	0.889	NULL	pfam_PLipase_D/transphosphatidylase,smart_PLipase_D/transphosphatidylase,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD4	HGNC	ENSG00000166428				106	0	0.00	50	3	5.66
PLEC	0	genome.wustl.edu	37	8	144994004	144994004	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	8	144994004	144994004	C	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	nonsense	c.10396	p.E3466*	0.999	NULL	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209	tier1	-	-	62	0	0.00	34	4	10.53
PLEKHM3	0	genome.wustl.edu	37	2	208795838	208795838	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	208795838	208795838	C	-	DEL	PLEKHM3	ENST00000427836	human	ensembl	74_37	-1	known	frame_shift_del	c.1698	p.K567fs	0.019	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHM3	HGNC	ENSG00000178385	tier1			42	0	0.00	10	2	16.67
PLIN4	0	genome.wustl.edu	37	19	4512014	4512014	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	4512014	4512014	A	G	SNP	PLIN4	ENST00000301286	human	ensembl	74_37	-1	novel	missense	c.1916	p.L639P	0.779	NULL	pfam_Perilipin,superfamily_Ankyrin_rpt-contain_dom	-	no_errors	PLIN4	HGNC	ENSG00000167676	tier1	-	-	107	0	0.00	45	4	8.16
PLK3	0	genome.wustl.edu	37	1	45269609	45269609	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	45269609	45269609	G	T	SNP	PLK3	ENST00000372201	human	ensembl	74_37	+1	known	missense	c.1171	p.A391S	0.990	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_POLO_box_duplicated_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_POLO_box_duplicated_dom,pfscan_Prot_kinase_dom	-	no_errors	PLK3	HGNC	ENSG00000173846	tier1	-	-	35	0	0.00	23	4	14.81
POC1B	0	genome.wustl.edu	37	12	89864263	89864263	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	89864263	89864263	C	T	SNP	POC1B	ENST00000313546	human	ensembl	74_37	-1	known	missense	c.685	p.G229S	0.983	pfam_WD40_repeat,pfam_TIF_beta_prop-like,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_TIF_beta_prop-like,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	POC1B	HGNC	ENSG00000139323	tier1	-	-	96	0	0.00	24	19	44.19
POLL	0	genome.wustl.edu	37	10	103345131	103345133	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	103345131	103345133	GGA	-	DEL	POLL	ENST00000299206	human	ensembl	74_37	-1	known	in_frame_del	c.515_513	p.P172in_frame_del	0.001:0.008:0.028	NULL	pfam_DNA_pol_lambd_fingers_domain,superfamily_DNA_pol_b-like_N,superfamily_DNA_pol_lambd_fingers_domain,superfamily_BRCT_dom,smart_DNA-dir_DNA_pol_X,pfscan_BRCT_dom,prints_DNA_pol_X_beta-like,prints_DNA_pol_X	-	no_errors	POLL	HGNC	ENSG00000166169	tier1			98	0	0.00	47	3	6.00
PPIEL	0	genome.wustl.edu	37	1	40011415	40011415	+	RNA	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	40011415	40011415	G	A	SNP	PPIEL	ENST00000417869	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-69E11.4	Clone_based_vega_gene	ENSG00000182109	tier1	-	-	104	0	0.00	55	4	6.78
PRAMEF6	0	genome.wustl.edu	37	1	13111576	13111576	+	Silent	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	13111576	13111576	A	G	SNP	PRAMEF6	ENST00000376182	human	ensembl	74_37	-1	known	silent	c.439	p.L147	0.007	NULL	NULL	-	no_errors	PRAMEF6	HGNC	ENSG00000232423	tier1	-	-	9	0	0.00	1	4	80.00
PRDX6	0	genome.wustl.edu	37	1	173454533	173454533	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	173454533	173454533	G	T	SNP	PRDX6	ENST00000340385	human	ensembl	74_37	+1	known	nonsense	c.286	p.E96*	0.996	pfam_AhpC/TSA,pfam_Redoxin,superfamily_Thioredoxin-like_fold	pfam_AhpC/TSA,pfam_Peroxiredoxin_C,pfam_Redoxin,superfamily_Thioredoxin-like_fold	-	no_errors	PRDX6	HGNC	ENSG00000117592				73	0	0.00	39	3	7.14
PRSS21	0	genome.wustl.edu	37	16	2871376	2871376	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	16	2871376	2871376	G	T	SNP	PRSS21	ENST00000005995	human	ensembl	74_37	+1	known	missense	c.715	p.G239C	0.983	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	PRSS21	HGNC	ENSG00000007038	tier1	-	-	103	0	0.00	56	4	6.67
PVRL4	0	genome.wustl.edu	37	1	161044500	161044500	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	161044500	161044500	C	T	SNP	PVRL4	ENST00000368012	human	ensembl	74_37	-1	known	missense	c.901	p.G301S	0.999	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PVRL4	HGNC	ENSG00000143217	tier1	-	-	46	0	0.00	29	6	17.14
QRFPR	0	genome.wustl.edu	37	4	122250641	122250641	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	4	122250641	122250641	T	G	SNP	QRFPR	ENST00000394427	human	ensembl	74_37	-1	known	missense	c.1124	p.K375T	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_NPFF_rcpt	-	no_errors	QRFPR	HGNC	ENSG00000186867	tier1	-	-	65	0	0.00	15	13	46.43
RANBP17	0	genome.wustl.edu	37	5	170597179	170597179	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	5	170597179	170597179	C	T	SNP	RANBP17	ENST00000523189	human	ensembl	74_37	+1	known	missense	c.1756	p.H586Y	0.996	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	RANBP17	HGNC	ENSG00000204764	tier1	-	-	95	0	0.00	34	15	30.61
RAX	0	genome.wustl.edu	37	18	56939785	56939785	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	18	56939785	56939785	G	A	SNP	RAX	ENST00000334889	human	ensembl	74_37	-1	known	silent	c.351	p.V117	0.000	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	RAX	HGNC	ENSG00000134438	tier1	-	-	81	0	0.00	32	6	15.79
RERE	0	genome.wustl.edu	37	1	8557522	8557522	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	8557522	8557522	A	T	SNP	RERE	ENST00000337907	human	ensembl	74_37	-1	known	missense	c.947	p.L316Q	1.000	pfam_ELM2_dom,pfscan_ELM2_dom	pfam_Atrophin-like,pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	RERE	HGNC	ENSG00000142599				60	0	0.00	28	2	6.67
RET	0	genome.wustl.edu	37	10	43615130	43615130	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	43615130	43615130	G	C	SNP	RET	ENST00000355710	human	ensembl	74_37	+1	known	missense	c.2544	p.M848I	1.000	pirsf_Tyr_kinase_Ret_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_Ret_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Cadherin,superfamily_Kinase-like_dom,superfamily_Cadherin-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Cadherin	-	no_errors	RET	HGNC	ENSG00000165731	tier1	-	-	73	0	0.00	27	4	12.90
RGL3	0	genome.wustl.edu	37	19	11529358	11529358	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	11529358	11529358	C	G	SNP	RGL3	ENST00000393423	human	ensembl	74_37	-1	known	missense	c.136	p.G46R	0.077	NULL	pfam_RasGRF_CDC25,pfam_Ras-assoc,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RGL3	HGNC	ENSG00000205517	tier1	-	-	42	0	0.00	14	4	22.22
RGS13	0	genome.wustl.edu	37	1	192613467	192613467	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	192613467	192613467	G	T	SNP	RGS13	ENST00000391995	human	ensembl	74_37	+1	known	missense	c.3	p.M1I	1.000	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS13	HGNC	ENSG00000127074				43	0	0.00	18	4	18.18
RNF122	0	genome.wustl.edu	37	8	33406936	33406936	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	8	33406936	33406936	A	-	DEL	RNF122	ENST00000256257	human	ensembl	74_37	-1	known	frame_shift_del	c.345	p.H116fs	0.997	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF122	HGNC	ENSG00000133874	tier1			45	0	0.00	27	2	6.90
ROBO3	0	genome.wustl.edu	37	11	124744730	124744730	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	124744730	124744730	G	T	SNP	ROBO3	ENST00000397801	human	ensembl	74_37	+1	known	missense	c.1998	p.Q666H	0.862	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Fibronectin_type3,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO3	HGNC	ENSG00000154134	tier1	-	-	60	0	0.00	36	4	10.00
RP1L1	0	genome.wustl.edu	37	8	10479151	10479151	+	RNA	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	8	10479151	10479151	A	C	SNP	RP1L1	ENST00000329335	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP1L1	HGNC	ENSG00000183638	tier1	-	-	66	0	0.00	14	5	26.32
RTN2	0	genome.wustl.edu	37	19	45997939	45997939	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	45997939	45997939	C	T	SNP	RTN2	ENST00000245923	human	ensembl	74_37	-1	known	missense	c.404	p.R135H	0.002	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN2	HGNC	ENSG00000125744				134	0	0.00	55	4	6.78
SAC3D1	0	genome.wustl.edu	37	11	64811901	64811901	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	64811901	64811901	G	T	SNP	SAC3D1	ENST00000398846	human	ensembl	74_37	+1	known	missense	c.779	p.R260L	0.870	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	-	no_errors	SAC3D1	HGNC	ENSG00000168061				67	0	0.00	45	3	6.25
SEC14L5	0	genome.wustl.edu	37	16	5038251	5038251	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	16	5038251	5038251	C	T	SNP	SEC14L5	ENST00000251170	human	ensembl	74_37	+1	known	silent	c.315	p.R105	0.148	pfam_PRELI/MSF1,pfscan_PRELI/MSF1	pfam_PRELI/MSF1,pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,superfamily_GOLD,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,pfscan_PRELI/MSF1,prints_CRAL-bd_toc_tran	-	no_errors	SEC14L5	HGNC	ENSG00000103184	tier1	-	-	48	0	0.00	16	4	20.00
SEMA6D	0	genome.wustl.edu	37	15	48054408	48054408	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	15	48054408	48054408	T	C	SNP	SEMA6D	ENST00000316364	human	ensembl	74_37	+1	known	missense	c.550	p.Y184H	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6D	HGNC	ENSG00000137872	tier1	-	-	58	0	0.00	17	6	26.09
SETBP1	0	genome.wustl.edu	37	18	42643107	42643107	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	18	42643107	42643107	G	T	SNP	SETBP1	ENST00000282030	human	ensembl	74_37	+1	known	missense	c.4235	p.R1412L	1.000	NULL	smart_AT_hook_DNA-bd_motif	-	no_errors	SETBP1	HGNC	ENSG00000152217				46	0	0.00	9	2	18.18
SHANK1	0	genome.wustl.edu	37	19	51169688	51169688	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	51169688	51169688	G	A	SNP	SHANK1	ENST00000391814	human	ensembl	74_37	-1	known	silent	c.5553	p.G1851	1.000	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681	tier1	-	-	34	0	0.00	21	4	16.00
SIK3	0	genome.wustl.edu	37	11	116797979	116797979	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	11	116797979	116797979	G	A	SNP	SIK3	ENST00000375300	human	ensembl	74_37	-1	known	missense	c.572	p.A191V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	SIK3	HGNC	ENSG00000160584	tier1	-	-	79	0	0.00	33	4	10.81
SIMC1	0	genome.wustl.edu	37	5	175751685	175751685	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	5	175751685	175751685	C	T	SNP	SIMC1	ENST00000443967	human	ensembl	74_37	+1	known	missense	c.2039	p.T680I	1.000	NULL	NULL	-	no_errors	SIMC1	HGNC	ENSG00000170085	tier1	-	-	77	0	0.00	53	4	7.02
SLC28A1	0	genome.wustl.edu	37	15	85478705	85478705	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	15	85478705	85478705	G	T	SNP	SLC28A1	ENST00000286749	human	ensembl	74_37	+1	known	missense	c.1537	p.A513S	0.007	pfam_Nucleos_tra2_C,tigrfam_C_nuclsd_transpt_met_bac	pfam_Nucleos_tra2_C,pfam_Nuclsd_transpt2,pfam_Nucleoside_recog_Gate,tigrfam_C_nuclsd_transpt_met_bac	-	no_errors	SLC28A1	HGNC	ENSG00000156222	tier1	-	-	47	0	0.00	27	4	12.90
SLC39A12	0	genome.wustl.edu	37	10	18254526	18254526	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	18254526	18254526	G	A	SNP	SLC39A12	ENST00000377369	human	ensembl	74_37	+1	known	missense	c.658	p.V220I	0.992	NULL	pfam_ZIP	-	no_errors	SLC39A12	HGNC	ENSG00000148482	tier1	-	-	71	0	0.00	25	6	19.35
SLC7A1	0	genome.wustl.edu	37	13	30091410	30091410	+	Silent	SNP	A	A	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	13	30091410	30091410	A	T	SNP	SLC7A1	ENST00000380752	human	ensembl	74_37	-1	known	silent	c.1548	p.L516	0.022	pirsf_AA/rel_permease1,tigrfam_Cat_AA_permease	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1,tigrfam_Cat_AA_permease	-	no_errors	SLC7A1	HGNC	ENSG00000139514	tier1	-	-	30	0	0.00	10	3	23.08
SLCO1B3	0	genome.wustl.edu	37	12	21028386	21028386	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	21028386	21028386	A	-	DEL	SLCO1B3	ENST00000553473	human	ensembl	74_37	+1	known	frame_shift_del	c.945	p.N317fs	0.000	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1B3	HGNC	ENSG00000111700	tier1			91	0	0.00	36	2	5.26
SMARCA1	0	genome.wustl.edu	37	X	128633806	128633806	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	128633806	128633806	A	C	SNP	SMARCA1	ENST00000371122	human	ensembl	74_37	-1	known	missense	c.1180	p.F394V	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_SLIDE,pfam_ISWI_HAND-dom,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,superfamily_ISWI_HAND-dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_SANT/Myb,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCA1	HGNC	ENSG00000102038	tier1	-	-	34	0	0.00	8	3	27.27
SMDT1	0	genome.wustl.edu	37	22	42478046	42478048	+	In_Frame_Del	DEL	GAT	GAT	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	GAT	GAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	22	42478046	42478048	GAT	-	DEL	SMDT1	ENST00000331479	human	ensembl	74_37	+1	known	in_frame_del	c.304_306	p.D105in_frame_del	1.000:1.000:0.998	pfam_UPF0466	pfam_UPF0466	-	no_errors	SMDT1	HGNC	ENSG00000183172	tier1			62	0	0.00	32	4	11.11
SND1	0	genome.wustl.edu	37	7	127729559	127729559	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	127729559	127729559	G	A	SNP	SND1	ENST00000354725	human	ensembl	74_37	+1	known	missense	c.2437	p.A813T	1.000	superfamily_Staphylococal_nuclease_OB-fold,pirsf_Silence_cplx_Nase-comp_TudorSN	pfam_Staphylococal_nuclease_OB-fold,pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,smart_Tudor,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Tudor,pfscan_Staphylococal_nuclease_OB-fold	-	no_errors	SND1	HGNC	ENSG00000197157	tier1	-	-	72	0	0.00	32	7	17.95
SPATA31A6	0	genome.wustl.edu	37	9	43625456	43625456	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	43625456	43625456	G	T	SNP	SPATA31A6	ENST00000332857	human	ensembl	74_37	-1	known	missense	c.3231	p.S1077R	0.000	NULL	NULL	-	no_errors	SPATA31A6	HGNC	ENSG00000185775	tier1	-	-	292	0	0.00	108	21	16.28
SPATA31D1	0	genome.wustl.edu	37	9	84609276	84609276	+	Silent	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	84609276	84609276	G	C	SNP	SPATA31D1	ENST00000344803	human	ensembl	74_37	+1	known	silent	c.3891	p.V1297	0.000	NULL	NULL	-	no_errors	SPATA31D1	HGNC	ENSG00000214929				75	0	0.00	23	2	8.00
SPG11	0	genome.wustl.edu	37	15	44952662	44952662	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	15	44952662	44952662	G	A	SNP	SPG11	ENST00000261866	human	ensembl	74_37	-1	known	missense	c.410	p.A137V	0.000	NULL	NULL	-	no_errors	SPG11	HGNC	ENSG00000104133				56	0	0.00	32	5	13.51
SPRED3	0	genome.wustl.edu	37	19	38882864	38882866	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	38882864	38882866	CCT	-	DEL	SPRED3	ENST00000338502	human	ensembl	74_37	+1	known	in_frame_del	c.359_361	p.S124in_frame_del	1.000:0.995:0.997	NULL	pfam_Sprouty,pfam_WH1/EVH1,smart_WH1/EVH1,pfscan_WH1/EVH1	-	no_errors	SPRED3	HGNC	ENSG00000188766	tier1			29	0	0.00	27	4	12.90
SPTA1	0	genome.wustl.edu	37	1	158584068	158584068	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	158584068	158584068	G	C	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.6817	p.L2273V	0.018	pfscan_EF_hand_dom	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554	tier1	-	-	82	0	0.00	34	11	24.44
ST7L	0	genome.wustl.edu	37	1	113159540	113159540	+	RNA	SNP	A	A	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	113159540	113159540	A	T	SNP	ST7L	ENST00000485753	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ST7L	HGNC	ENSG00000007341	tier1	-	-	72	0	0.00	25	14	35.90
SULF1	0	genome.wustl.edu	37	8	70476244	70476244	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	8	70476244	70476244	G	T	SNP	SULF1	ENST00000260128	human	ensembl	74_37	+1	known	missense	c.34	p.V12F	0.997	pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF1	HGNC	ENSG00000137573	tier1	-	-	70	0	0.00	57	8	12.31
SUPT6H	0	genome.wustl.edu	37	17	27027397	27027397	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	27027397	27027397	A	C	SNP	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	missense	c.4673	p.N1558T	1.000	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111	tier1	-	-	58	0	0.00	23	4	14.81
SVIL	0	genome.wustl.edu	37	10	29747401	29747401	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	29747401	29747401	G	C	SNP	SVIL	ENST00000355867	human	ensembl	74_37	-1	known	missense	c.6520	p.L2174V	1.000	superfamily_Villin_headpiece,pfscan_Villin_headpiece	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	SVIL	HGNC	ENSG00000197321				37	0	0.00	10	2	16.67
SYCP2L	0	genome.wustl.edu	37	6	10887362	10887362	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	10887362	10887362	G	T	SNP	SYCP2L	ENST00000283141	human	ensembl	74_37	+1	known	missense	c.3	p.M1I	0.105	NULL	NULL	-	no_errors	SYCP2L	HGNC	ENSG00000153157				116	0	0.00	38	3	7.32
SYNE1	0	genome.wustl.edu	37	6	152771897	152771897	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	152771897	152771897	C	T	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	silent	c.3258	p.V1086	0.792	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	63	0	0.00	38	4	9.52
SYT16	0	genome.wustl.edu	37	14	62550971	62550971	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	14	62550971	62550971	A	-	DEL	SYT16	ENST00000430451	human	ensembl	74_37	+1	novel	frame_shift_del	c.1492	p.T498fs	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYT16	HGNC	ENSG00000139973	tier1			65	0	0.00	15	2	11.76
SYT5	0	genome.wustl.edu	37	19	55686690	55686690	+	Silent	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	55686690	55686690	C	A	SNP	SYT5	ENST00000354308	human	ensembl	74_37	-1	known	silent	c.558	p.L186	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT5	HGNC	ENSG00000129990	tier1	-	-	50	0	0.00	31	7	17.95
TCEB3CL2	0	genome.wustl.edu	37	18	44543396	44543396	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	18	44543396	44543396	A	G	SNP	TCEB3CL2	ENST00000591973	human	ensembl	74_37	-1	known	missense	c.976	p.S326P	0.007	NULL	pfam_RNA_pol_II_trans_fac_SIII_A,pfam_TFIIS_N,superfamily_TFIIS_N,smart_TFIIS/CRSP70_N_sub	-	no_errors	TCEB3CL2	HGNC	ENSG00000266996	tier1	-	-	56	0	0.00	23	6	20.69
TCOF1	0	genome.wustl.edu	37	5	149776309	149776309	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	5	149776309	149776309	G	A	SNP	TCOF1	ENST00000451292	human	ensembl	74_37	+1	known	missense	c.4357	p.E1453K	0.958	NULL	pfam_TCS_treacle,smart_LisH_dimerisation,pfscan_LisH_dimerisation,prints_Treacle-like_TCS	-	no_errors	TCOF1	HGNC	ENSG00000070814				102	0	0.00	37	2	5.00
TCTN3	0	genome.wustl.edu	37	10	97453624	97453624	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	97453624	97453624	C	T	SNP	TCTN3	ENST00000371217	human	ensembl	74_37	-1	known	silent	c.33	p.V11	0.936	NULL	pfam_DUF1619	-	no_errors	TCTN3	HGNC	ENSG00000119977	tier1	-	-	71	0	0.00	24	9	25.71
TENM3	0	genome.wustl.edu	37	4	183694653	183694653	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	4	183694653	183694653	G	A	SNP	TENM3	ENST00000406950	human	ensembl	74_37	+1	known	missense	c.4921	p.V1641I	1.000	tigrfam_YD	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM3	HGNC	ENSG00000218336	tier1	-	-	79	0	0.00	20	4	16.67
TFR2	0	genome.wustl.edu	37	7	100238621	100238621	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	100238621	100238621	C	T	SNP	TFR2	ENST00000223051	human	ensembl	74_37	-1	known	silent	c.264	p.T88	0.000	NULL	pfam_TFR-like_dimer_dom,pfam_Peptidase_M28,pfam_Protease-assoc_domain,superfamily_TFR-like_dimer_dom	-	no_errors	TFR2	HGNC	ENSG00000106327	tier1	-	-	64	0	0.00	49	6	10.91
THBS4	0	genome.wustl.edu	37	5	79351798	79351798	+	Silent	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	5	79351798	79351798	T	C	SNP	THBS4	ENST00000350881	human	ensembl	74_37	+1	known	silent	c.483	p.A161	0.939	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Thrombospondin_C,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	THBS4	HGNC	ENSG00000113296	tier1	-	-	26	0	0.00	11	3	21.43
THRA	0	genome.wustl.edu	37	17	38241009	38241009	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	38241009	38241009	G	A	SNP	THRA	ENST00000264637	human	ensembl	74_37	+1	known	missense	c.517	p.E173K	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd,prints_ThyrH_rcpt	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_ThyrH_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	THRA	HGNC	ENSG00000126351	tier1	-	-	34	0	0.00	57	24	29.63
TIMELESS	0	genome.wustl.edu	37	12	56815246	56815246	+	Silent	SNP	T	T	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	56815246	56815246	T	C	SNP	TIMELESS	ENST00000553532	human	ensembl	74_37	-1	known	silent	c.2757	p.T919	0.997	pfam_TIMELESS_C	pfam_TIMELESS_C,pfam_Timeless	-	no_errors	TIMELESS	HGNC	ENSG00000111602	tier1	-	-	32	0	0.00	11	4	26.67
TMPRSS15	0	genome.wustl.edu	37	21	19685373	19685373	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	21	19685373	19685373	G	A	SNP	TMPRSS15	ENST00000284885	human	ensembl	74_37	-1	known	missense	c.2054	p.T685M	0.000	pfam_SRCR,superfamily_LDrepeatLR_classA_rpt,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_Peptidase_S1,pfam_CUB_dom,pfam_MAM_dom,pfam_SEA_dom,pfam_LDrepeatLR_classA_rpt,pfam_Peptidase_S1A_nudel,pfam_SRCR,superfamily_Trypsin-like_Pept_dom,superfamily_ConA-like_lec_gl_sf,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_Srcr_rcpt-rel,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_MAM_dom,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,pfscan_SEA_dom,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt	-	no_errors	TMPRSS15	HGNC	ENSG00000154646	tier1	-	-	62	0	0.00	23	6	20.69
TNFAIP6	0	genome.wustl.edu	37	2	152214210	152214210	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	152214210	152214210	G	T	SNP	TNFAIP6	ENST00000243347	human	ensembl	74_37	+1	known	missense	c.30	p.L10F	1.000	NULL	pfam_CUB_dom,pfam_Link,superfamily_CUB_dom,superfamily_C-type_lectin_fold,smart_Link,smart_CUB_dom,pfscan_CUB_dom,pfscan_Link,prints_Link	-	no_errors	TNFAIP6	HGNC	ENSG00000123610				75	0	0.00	30	2	6.25
TOP3A	0	genome.wustl.edu	37	17	18181536	18181536	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	18181536	18181536	G	A	SNP	TOP3A	ENST00000321105	human	ensembl	74_37	-1	known	silent	c.2280	p.S760	0.989	NULL	pfam_Topo_IA_cen,pfam_Znf_GRF,pfam_Toprim_domain,pfam_Topo_IA_Znf,superfamily_Topo_IA_core_domain,superfamily_Znf_CCHC,smart_Toprim_domain,smart_Topo_IA_2,smart_Topo_IA_DNA-bd,prints_Topo_IA	-	no_errors	TOP3A	HGNC	ENSG00000177302				77	0	0.00	41	4	8.89
TP53	0	genome.wustl.edu	37	17	7578406	7578406	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	7578406	7578406	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.524	p.R175H	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934578	-	44	0	0.00	16	13	44.83
TRDMT1	0	genome.wustl.edu	37	10	17195487	17195487	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	17195487	17195487	C	T	SNP	TRDMT1	ENST00000488990	human	ensembl	74_37	-1	putative	missense	c.725	p.R242K	0.000	NULL	pfam_C5_MeTfrase	-	no_errors	TRDMT1	HGNC	ENSG00000107614	tier1	-	-	90	0	0.00	38	12	24.00
TRIM8	0	genome.wustl.edu	37	10	104416539	104416539	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	104416539	104416539	G	A	SNP	TRIM8	ENST00000302424	human	ensembl	74_37	+1	known	missense	c.1084	p.V362I	0.958	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	TRIM8	HGNC	ENSG00000171206	tier1	-	-	48	0	0.00	28	8	22.22
TRIOBP	0	genome.wustl.edu	37	22	38120335	38120335	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	22	38120335	38120335	A	G	SNP	TRIOBP	ENST00000406386	human	ensembl	74_37	+1	known	missense	c.1772	p.N591S	0.002	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	TRIOBP	HGNC	ENSG00000100106				364	0	0.00	125	7	5.30
TRIP12	0	genome.wustl.edu	37	2	230678737	230678737	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	230678737	230678737	G	A	SNP	TRIP12	ENST00000283943	human	ensembl	74_37	-1	known	missense	c.1691	p.A564V	1.000	superfamily_ARM-type_fold	pfam_HECT,superfamily_HECT,superfamily_ARM-type_fold,smart_HECT,pfscan_HECT,pfscan_WWE-dom	-	no_errors	TRIP12	HGNC	ENSG00000153827	tier1	-	-	67	0	0.00	22	3	12.00
TRPA1	0	genome.wustl.edu	37	8	72966069	72966069	+	Silent	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	8	72966069	72966069	C	A	SNP	TRPA1	ENST00000262209	human	ensembl	74_37	-1	known	silent	c.1563	p.A521	0.834	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ion_trans_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	TRPA1	HGNC	ENSG00000104321	tier1	-	-	49	0	0.00	30	15	33.33
TSGA10	0	genome.wustl.edu	37	2	99743565	99743565	+	RNA	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	99743565	99743565	C	T	SNP	TSGA10	ENST00000476849	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	TSGA10	HGNC	ENSG00000135951	tier1	-	-	97	0	0.00	42	4	8.70
TSPAN9	0	genome.wustl.edu	37	12	3390494	3390494	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	12	3390494	3390494	C	T	SNP	TSPAN9	ENST00000011898	human	ensembl	74_37	+1	known	missense	c.563	p.T188M	0.996	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	TSPAN9	HGNC	ENSG00000011105	tier1	-	-	89	0	0.00	38	5	11.63
TTC1	0	genome.wustl.edu	37	5	159437569	159437569	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	5	159437569	159437569	G	A	SNP	TTC1	ENST00000231238	human	ensembl	74_37	+1	known	missense	c.34	p.E12K	0.999	NULL	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC1	HGNC	ENSG00000113312	tier1	-	-	69	0	0.00	19	4	17.39
TTC18	0	genome.wustl.edu	37	10	75056899	75056899	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	75056899	75056899	G	T	SNP	TTC18	ENST00000310715	human	ensembl	74_37	-1	known	nonsense	c.1755	p.Y585*	0.833	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC18	HGNC	ENSG00000156042				63	0	0.00	21	2	8.70
TTC3	0	genome.wustl.edu	37	21	38460554	38460554	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	21	38460554	38460554	C	T	SNP	TTC3	ENST00000354749	human	ensembl	74_37	+1	known	silent	c.246	p.C82	1.000	NULL	pfam_Znf_C3HC4_RING-type,superfamily_DEATH-like_dom,smart_TPR_repeat,smart_Znf_RING,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RING	-	no_errors	TTC3	HGNC	ENSG00000182670	tier1	-	-	57	0	0.00	18	13	41.94
TTF1	0	genome.wustl.edu	37	9	135273587	135273587	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	135273587	135273587	G	A	SNP	TTF1	ENST00000334270	human	ensembl	74_37	-1	known	missense	c.1718	p.P573L	0.991	NULL	superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	TTF1	HGNC	ENSG00000125482				100	0	0.00	29	3	9.38
TUBA3C	0	genome.wustl.edu	37	13	19748175	19748175	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	13	19748175	19748175	T	G	SNP	TUBA3C	ENST00000400113	human	ensembl	74_37	-1	known	missense	c.1181	p.K394T	1.000	superfamily_Tub_FtsZ_C,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3C	HGNC	ENSG00000198033	tier1	-	-	106	0	0.00	50	7	12.28
TWIST1	0	genome.wustl.edu	37	7	19156445	19156445	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	19156445	19156445	T	G	SNP	TWIST1	ENST00000242261	human	ensembl	74_37	-1	known	missense	c.500	p.E167A	1.000	superfamily_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TWIST1	HGNC	ENSG00000122691	tier1	-	-	60	0	0.00	28	11	28.21
TXNDC15	0	genome.wustl.edu	37	5	134229230	134229230	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	5	134229230	134229230	C	A	SNP	TXNDC15	ENST00000358387	human	ensembl	74_37	+1	known	missense	c.640	p.L214M	1.000	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC15	HGNC	ENSG00000113621	tier1	-	-	99	0	0.00	35	4	10.26
USP11	0	genome.wustl.edu	37	X	47104088	47104088	+	Silent	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	47104088	47104088	C	T	SNP	USP11	ENST00000218348	human	ensembl	74_37	+1	known	silent	c.1980	p.D660	0.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,smart_Pept_C19_DUSP,pfscan_Peptidase_C19/C67	-	no_errors	USP11	HGNC	ENSG00000102226	tier1	rs144034150	-	27	0	0.00	10	3	23.08
USP17L2	0	genome.wustl.edu	37	8	11995085	11995085	+	Silent	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	8	11995085	11995085	G	A	SNP	USP17L2	ENST00000333796	human	ensembl	74_37	-1	known	silent	c.1185	p.G395	0.000	pfam_HABP4_PAIRBP1-bd	pfam_Peptidase_C19/C67,pfam_HABP4_PAIRBP1-bd,pfscan_Peptidase_C19/C67	-	no_errors	USP17L2	HGNC	ENSG00000223443	tier1	-	-	263	0	0.00	118	12	9.23
USP32P1	0	genome.wustl.edu	37	17	16706720	16706720	+	RNA	SNP	C	C	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	17	16706720	16706720	C	A	SNP	USP32P1	ENST00000341745	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.214	-	-	-	no_errors	USP32P1	HGNC	ENSG00000188933	tier1	-	-	179	0	0.00	100	11	9.91
UTRN	0	genome.wustl.edu	37	6	144858790	144858790	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	6	144858790	144858790	G	T	SNP	UTRN	ENST00000367545	human	ensembl	74_37	+1	known	missense	c.6306	p.K2102N	0.159	smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	UTRN	HGNC	ENSG00000152818	tier1	-	-	68	0	0.00	38	4	9.52
VIL1	0	genome.wustl.edu	37	2	219301231	219301231	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	2	219301231	219301231	C	-	DEL	VIL1	ENST00000248444	human	ensembl	74_37	+1	known	frame_shift_del	c.1853	p.R620fs	0.000	smart_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	VIL1	HGNC	ENSG00000127831	tier1			59	0	0.00	24	2	7.69
VPS26A	0	genome.wustl.edu	37	10	70930990	70930990	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	10	70930990	70930990	G	A	SNP	VPS26A	ENST00000263559	human	ensembl	74_37	+1	known	missense	c.949	p.E317K	1.000	NULL	pfam_VPS26	-	no_errors	VPS26A	HGNC	ENSG00000122958	tier1	-	-	52	0	0.00	31	4	11.43
VWA5B1	0	genome.wustl.edu	37	1	20644148	20644148	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	20644148	20644148	G	-	DEL	VWA5B1	ENST00000289815	human	ensembl	74_37	+1	known	frame_shift_del	c.689	p.R230fs	0.996	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA5B1	HGNC	ENSG00000158816	tier1			51	0	0.00	15	2	11.76
VWA5B1	0	genome.wustl.edu	37	1	20662937	20662937	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	20662937	20662937	A	-	DEL	VWA5B1	ENST00000289815	human	ensembl	74_37	+1	known	frame_shift_del	c.1900	p.N635fs	0.007	NULL	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA5B1	HGNC	ENSG00000158816	tier1			27	0	0.00	10	2	16.67
WBSCR17	0	genome.wustl.edu	37	7	71135008	71135008	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	71135008	71135008	A	C	SNP	WBSCR17	ENST00000333538	human	ensembl	74_37	+1	known	missense	c.1318	p.S440R	1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	WBSCR17	HGNC	ENSG00000185274	tier1	-	-	77	0	0.00	38	13	25.49
WDR34	0	genome.wustl.edu	37	9	131403128	131403128	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	9	131403128	131403128	C	T	SNP	WDR34	ENST00000372715	human	ensembl	74_37	-1	known	missense	c.277	p.V93M	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR34	HGNC	ENSG00000119333	tier1	-	-	55	0	0.00	17	5	22.73
WDR62	0	genome.wustl.edu	37	19	36562584	36562584	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	36562584	36562584	C	G	SNP	WDR62	ENST00000401500	human	ensembl	74_37	+1	known	missense	c.1009	p.L337V	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR62	HGNC	ENSG00000075702	tier1	-	-	42	0	0.00	21	13	38.24
WDR64	0	genome.wustl.edu	37	1	241934999	241934999	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	1	241934999	241934999	G	T	SNP	WDR64	ENST00000366552	human	ensembl	74_37	+1	known	missense	c.2260	p.G754C	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR64	HGNC	ENSG00000162843				54	0	0.00	30	2	6.25
WEE2	0	genome.wustl.edu	37	7	141424037	141424037	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	141424037	141424037	G	T	SNP	WEE2	ENST00000397541	human	ensembl	74_37	+1	known	nonsense	c.1183	p.G395*	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Wee1-like_protein_kinase,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Wee1-like_protein_kinase,pfscan_Prot_kinase_dom	-	no_errors	WEE2	HGNC	ENSG00000214102	tier1	-	-	45	0	0.00	32	4	11.11
WHSC1L1	0	genome.wustl.edu	37	8	38137195	38137195	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	8	38137195	38137195	C	T	SNP	WHSC1L1	ENST00000317025	human	ensembl	74_37	-1	known	missense	c.3623	p.R1208H	1.000	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	pfam_PWWP_dom,pfam_SET_dom,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	WHSC1L1	HGNC	ENSG00000147548	tier1	-	-	94	0	0.00	47	5	9.43
XIST	0	genome.wustl.edu	37	X	73067337	73067337	+	RNA	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	73067337	73067337	G	A	SNP	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	XIST	HGNC	ENSG00000229807				10	0	0.00	7	3	30.00
XRCC6	0	genome.wustl.edu	37	22	42032238	42032238	+	Splice_Site	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	22	42032238	42032238	A	G	SNP	XRCC6	ENST00000402580	human	ensembl	74_37	+1	novel	splice_site	c.196-2	e3-2	1.000	-	-	-	no_errors	XRCC6	HGNC	ENSG00000196419	tier1	-	-	81	0	0.00	34	4	10.53
ZBTB46	0	genome.wustl.edu	37	20	62422008	62422008	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	20	62422008	62422008	C	T	SNP	ZBTB46	ENST00000245663	human	ensembl	74_37	-1	known	missense	c.103	p.V35M	0.219	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_DUF3342,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB46	HGNC	ENSG00000130584				18	0	0.00	8	3	27.27
ZCCHC12	0	genome.wustl.edu	37	X	117959806	117959806	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	X	117959806	117959806	C	T	SNP	ZCCHC12	ENST00000310164	human	ensembl	74_37	+1	known	missense	c.599	p.A200V	0.994	NULL	superfamily_Znf_CCHC	-	no_errors	ZCCHC12	HGNC	ENSG00000174460				29	0	0.00	32	4	11.11
ZFP82	0	genome.wustl.edu	37	19	36883755	36883755	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	36883755	36883755	T	G	SNP	ZFP82	ENST00000392161	human	ensembl	74_37	-1	known	missense	c.1487	p.H496P	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP82	HGNC	ENSG00000181007	tier1	-	-	88	0	0.00	42	15	26.32
ZFP90	0	genome.wustl.edu	37	16	68598462	68598462	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	16	68598462	68598462	G	A	SNP	ZFP90	ENST00000398253	human	ensembl	74_37	+1	known	missense	c.1772	p.R591Q	0.099	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP90	HGNC	ENSG00000184939				77	0	0.00	35	2	5.41
ZFPM2	0	genome.wustl.edu	37	8	106646475	106646475	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	8	106646475	106646475	A	C	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	missense	c.422	p.K141T	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946	tier1	-	-	59	0	0.00	38	15	28.30
ZFYVE21	0	genome.wustl.edu	37	14	104194146	104194146	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	14	104194146	104194146	C	T	SNP	ZFYVE21	ENST00000216602	human	ensembl	74_37	+1	known	missense	c.253	p.R85W	1.000	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE21	HGNC	ENSG00000100711	tier1	-	-	61	0	0.00	25	4	13.79
ZNF138	0	genome.wustl.edu	37	7	64293429	64293430	+	RNA	DEL	TA	TA	-			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	7	64293429	64293430	TA	-	DEL	ZNF138	ENST00000430838	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ZNF138	HGNC	ENSG00000197008	tier1			74	0	0.00	33	2	5.71
ZNF254	0	genome.wustl.edu	37	19	24310680	24310680	+	Silent	SNP	A	A	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	24310680	24310680	A	G	SNP	ZNF254	ENST00000357002	human	ensembl	74_37	+1	known	silent	c.1878	p.G626	0.997	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF254	HGNC	ENSG00000213096	tier1	-	-	60	0	0.00	31	6	16.22
ZNF266	0	genome.wustl.edu	37	19	9524071	9524071	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	9524071	9524071	A	C	SNP	ZNF266	ENST00000361151	human	ensembl	74_37	-1	known	missense	c.1530	p.H510Q	0.091	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,smart_Znf_BED_prd,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF266	HGNC	ENSG00000174652				79	0	0.00	28	3	9.68
ZNF559-ZNF177	0	genome.wustl.edu	37	19	9448586	9448586	+	RNA	SNP	T	T	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	9448586	9448586	T	G	SNP	ZNF559-ZNF177	ENST00000605301	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ZNF177	Uniprot_gn	ENSG00000270011	tier1	-	-	57	0	0.00	16	8	33.33
ZNF675	0	genome.wustl.edu	37	19	23836558	23836558	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	23836558	23836558	C	G	SNP	ZNF675	ENST00000359788	human	ensembl	74_37	-1	known	missense	c.1177	p.E393Q	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF675	HGNC	ENSG00000197372	tier1	-	-	99	0	0.00	38	6	13.64
ZNF880	0	genome.wustl.edu	37	19	52876492	52876492	+	Splice_Site	SNP	T	T	A			TCGA-L5-A8NG-01A-11D-A37C-09	TCGA-L5-A8NG-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	c63e7bd8-4fcd-42af-9df4-5403e90653ae	ba900120-b0b0-4733-8a20-d6f83a03b0d0	19	52876492	52876492	T	A	SNP	ZNF880	ENST00000422689	human	ensembl	74_37	+1	known	splice_site	c.139+2	e2+2	0.876	-	-	-	no_errors	ZNF880	HGNC	ENSG00000221923	tier1	-	-	98	0	0.00	60	4	6.25
