Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AADACL4	0	genome.wustl.edu	37	1	12726318	12726318	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	12726318	12726318	G	A	SNP	AADACL4	ENST00000376221	human	ensembl	74_37	+1	known	missense	c.796	p.A266T	0.001	pirsf_Arylacetamide_deacetylase	pfam_AB_hydrolase_3,pirsf_Arylacetamide_deacetylase	-	no_errors	AADACL4	HGNC	ENSG00000204518				26	0	0.00	13	2	13.33
ABCA12	0	genome.wustl.edu	37	2	215815790	215815790	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	215815790	215815790	A	C	SNP	ABCA12	ENST00000272895	human	ensembl	74_37	-1	known	missense	c.6665	p.F2222C	0.994	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA12	HGNC	ENSG00000144452	tier1	-	-	50	0	0.00	46	4	8.00
ABCA13	0	genome.wustl.edu	37	7	48315875	48315875	+	Silent	SNP	T	T	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	48315875	48315875	T	G	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	silent	c.6612	p.L2204	0.975	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	tier1	-	-	72	0	0.00	51	27	34.62
ABCA3	0	genome.wustl.edu	37	16	2338177	2338177	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	2338177	2338177	C	T	SNP	ABCA3	ENST00000301732	human	ensembl	74_37	-1	known	missense	c.2854	p.D952N	0.409	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA3	HGNC	ENSG00000167972	tier1	rs144138653	-	60	0	0.00	21	19	47.50
ABCC11	0	genome.wustl.edu	37	16	48220864	48220864	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	48220864	48220864	T	C	SNP	ABCC11	ENST00000356608	human	ensembl	74_37	-1	known	missense	c.3071	p.Q1024R	0.151	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC11	HGNC	ENSG00000121270	tier1	-	-	55	0	0.00	26	10	27.78
ABI3BP	0	genome.wustl.edu	37	3	100539928	100539928	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	100539928	100539928	G	T	SNP	ABI3BP	ENST00000383691	human	ensembl	74_37	-1	known	missense	c.769	p.L257I	0.002	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	ABI3BP	HGNC	ENSG00000154175	tier1	-	-	68	0	0.00	36	4	10.00
ADAD2	0	genome.wustl.edu	37	16	84230321	84230321	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	84230321	84230321	G	T	SNP	ADAD2	ENST00000268624	human	ensembl	74_37	+1	known	missense	c.1841	p.R614M	0.000	pfam_A_deamin,smart_A_deamin,pfscan_A_deamin	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADAD2	HGNC	ENSG00000140955				60	0	0.00	26	4	13.33
ADAM21P1	0	genome.wustl.edu	37	14	70713687	70713687	+	RNA	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	14	70713687	70713687	C	T	SNP	ADAM21P1	ENST00000530196	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	ADAM21P1	HGNC	ENSG00000235812				84	0	0.00	64	6	8.57
ADAM28	0	genome.wustl.edu	37	8	24199233	24199233	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	24199233	24199233	G	T	SNP	ADAM28	ENST00000265769	human	ensembl	74_37	+1	known	missense	c.1793	p.G598V	0.025	smart_ADAM_Cys-rich	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM28	HGNC	ENSG00000042980	tier1	-	-	72	0	0.00	58	20	25.64
ADAMTS2	0	genome.wustl.edu	37	5	178585827	178585827	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	5	178585827	178585827	G	A	SNP	ADAMTS2	ENST00000251582	human	ensembl	74_37	-1	known	silent	c.1029	p.C343	1.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS2,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS2	HGNC	ENSG00000087116	tier1	-	-	38	0	0.00	18	4	18.18
ADH1A	0	genome.wustl.edu	37	4	100205628	100205628	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	4	100205628	100205628	C	T	SNP	ADH1A	ENST00000209668	human	ensembl	74_37	-1	known	silent	c.495	p.S165	0.952	superfamily_GroES-like,smart_PKS_ER	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like,smart_PKS_ER	-	no_errors	ADH1A	HGNC	ENSG00000187758	tier1	-	-	82	0	0.00	17	42	71.19
ADRB2	0	genome.wustl.edu	37	5	148206658	148206659	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	5	148206658	148206659	-	T	INS	ADRB2	ENST00000305988	human	ensembl	74_37	+1	known	frame_shift_ins	c.264_265	p.G89fs	0.996:1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_ADR_fam	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRB2_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam	-	no_errors	ADRB2	HGNC	ENSG00000169252	tier1			41	0	0.00	13	2	13.33
AGO4	0	genome.wustl.edu	37	1	36291647	36291647	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	36291647	36291647	C	A	SNP	AGO4	ENST00000373210	human	ensembl	74_37	+1	known	missense	c.746	p.T249N	1.000	pfam_PAZ_dom,superfamily_PAZ_dom,smart_PAZ_dom,pfscan_PAZ_dom	pfam_Piwi,pfam_PAZ_dom,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	AGO4	HGNC	ENSG00000134698	tier1	-	-	47	0	0.00	33	4	10.81
AHCYL2	0	genome.wustl.edu	37	7	129040146	129040146	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	129040146	129040146	C	T	SNP	AHCYL2	ENST00000325006	human	ensembl	74_37	+1	known	missense	c.839	p.A280V	1.000	pfam_Adenosylhomocysteinase,tigrfam_Adenosylhomocysteinase	pfam_Adenosylhomocysteinase,pfam_Ado_hCys_hydrolase_NAD-bd,pfam_D-isomer_2_OHA_DH_NAD-bd,tigrfam_Adenosylhomocysteinase	-	no_errors	AHCYL2	HGNC	ENSG00000158467	tier1	-	-	74	0	0.00	57	4	6.56
AKAP1	0	genome.wustl.edu	37	17	55195798	55195798	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	55195798	55195798	A	C	SNP	AKAP1	ENST00000337714	human	ensembl	74_37	+1	known	missense	c.2557	p.T853P	0.342	NULL	pfam_Tudor,pfam_KH_dom_type_1,smart_KH_dom,smart_Tudor,pfscan_Tudor,pfscan_KH_dom_type_1	-	no_errors	AKAP1	HGNC	ENSG00000121057	tier1	-	-	47	0	0.00	21	9	30.00
ALPK1	0	genome.wustl.edu	37	4	113345108	113345108	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	4	113345108	113345108	T	C	SNP	ALPK1	ENST00000509722	human	ensembl	74_37	+1	known	missense	c.329	p.F110S	0.096	NULL	NULL	-	no_errors	ALPK1	HGNC	ENSG00000073331				88	0	0.00	30	2	6.25
AMICA1	0	genome.wustl.edu	37	11	118083141	118083141	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	118083141	118083141	G	T	SNP	AMICA1	ENST00000356289	human	ensembl	74_37	-1	known	nonsense	c.179	p.S60*	0.064	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	AMICA1	HGNC	ENSG00000160593				67	0	0.00	35	4	10.26
AMPD1	0	genome.wustl.edu	37	1	115221045	115221045	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	115221045	115221045	G	A	SNP	AMPD1	ENST00000520113	human	ensembl	74_37	-1	known	missense	c.1100	p.T367I	0.995	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	pfam_A/AMP_deaminase_dom,pirsf_AMP_deaminase,tigrfam_AMP_deaminase	-	no_errors	AMPD1	HGNC	ENSG00000116748	tier1	-	-	57	0	0.00	32	6	15.79
AMY2B	0	genome.wustl.edu	37	1	104112709	104112709	+	RNA	SNP	C	C	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	104112709	104112709	C	G	SNP	AMY2B	ENST00000491397	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AMY2B	HGNC	ENSG00000240038	tier1	-	-	41	0	0.00	38	4	9.52
ANK2	0	genome.wustl.edu	37	4	114275201	114275201	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	4	114275201	114275201	G	A	SNP	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	silent	c.5427	p.A1809	0.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362	tier1	-	-	45	0	0.00	12	3	20.00
ANKRD30BP2	0	genome.wustl.edu	37	21	14418680	14418680	+	RNA	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	21	14418680	14418680	T	C	SNP	ANKRD30BP2	ENST00000507941	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.045	-	-	-	no_errors	ANKRD30BP2	HGNC	ENSG00000224309	tier1	-	-	172	0	0.00	80	14	14.74
ANKRD36BP2	0	genome.wustl.edu	37	2	89102884	89102884	+	RNA	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	89102884	89102884	G	T	SNP	ANKRD36BP2	ENST00000393525	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.019	-	-	-	no_errors	ANKRD36BP2	HGNC	ENSG00000230006				10	0	0.00	5	4	44.44
AQP3	0	genome.wustl.edu	37	9	33442476	33442476	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	33442476	33442476	A	G	SNP	AQP3	ENST00000297991	human	ensembl	74_37	-1	known	missense	c.533	p.I178T	1.000	pfam_MIP,superfamily_Aquaporin-like,prints_MIP,tigrfam_MIP	pfam_MIP,superfamily_Aquaporin-like,prints_Aquaporin_3,prints_MIP,tigrfam_MIP	-	no_errors	AQP3	HGNC	ENSG00000165272				50	0	0.00	20	4	16.67
ARHGAP32	0	genome.wustl.edu	37	11	128844193	128844193	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	128844193	128844193	G	T	SNP	ARHGAP32	ENST00000310343	human	ensembl	74_37	-1	known	missense	c.2857	p.P953T	1.000	NULL	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP32	HGNC	ENSG00000134909				41	0	0.00	34	2	5.56
ARHGEF10	0	genome.wustl.edu	37	8	1851472	1851472	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	1851472	1851472	G	A	SNP	ARHGEF10	ENST00000398564	human	ensembl	74_37	+1	known	missense	c.1751	p.G584D	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF10	HGNC	ENSG00000104728				27	0	0.00	38	2	5.00
ARHGEF18	0	genome.wustl.edu	37	19	7511987	7511987	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	7511987	7511987	A	T	SNP	ARHGEF18	ENST00000359920	human	ensembl	74_37	+1	known	missense	c.1106	p.H369L	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF18	HGNC	ENSG00000104880				68	0	0.00	63	4	5.97
ARSJ	0	genome.wustl.edu	37	4	114823494	114823494	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	4	114823494	114823494	T	A	SNP	ARSJ	ENST00000315366	human	ensembl	74_37	-1	known	missense	c.1736	p.K579M	0.628	NULL	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSJ	HGNC	ENSG00000180801				35	0	0.00	25	2	7.41
ART5	0	genome.wustl.edu	37	11	3661402	3661402	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	3661402	3661402	G	T	SNP	ART5	ENST00000359918	human	ensembl	74_37	-1	known	missense	c.257	p.P86H	0.579	pfam_ART	pfam_ART,prints_ART	-	no_errors	ART5	HGNC	ENSG00000167311	tier1	-	-	59	0	0.00	51	5	8.93
ASH1L	0	genome.wustl.edu	37	1	155448058	155448058	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	155448058	155448058	G	T	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	missense	c.4603	p.R1535S	1.000	NULL	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539	tier1	-	-	71	0	0.00	56	4	6.67
ASTN2	0	genome.wustl.edu	37	9	120176909	120176911	+	In_Frame_Del	DEL	GCG	GCG	-			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	GCG	GCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	120176909	120176911	GCG	-	DEL	ASTN2	ENST00000313400	human	ensembl	74_37	-1	known	in_frame_del	c.308_306	p.A103in_frame_del	1.000:1.000:1.000	NULL	pfam_MACPF,superfamily_Fibronectin_type3,smart_MACPF	-	no_errors	ASTN2	HGNC	ENSG00000148219	tier1			35	0	0.00	16	3	15.79
AUNIP	0	genome.wustl.edu	37	1	26185816	26185816	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	26185816	26185816	G	A	SNP	AUNIP	ENST00000538789	human	ensembl	74_37	-1	known	silent	c.33	p.C11	0.969	NULL	NULL	-	no_errors	AUNIP	HGNC	ENSG00000127423	tier1	-	-	41	0	0.00	25	5	16.67
B4GALT3	0	genome.wustl.edu	37	1	161144995	161144995	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	161144995	161144995	T	C	SNP	B4GALT3	ENST00000319769	human	ensembl	74_37	-1	known	missense	c.277	p.S93G	1.000	pfam_Galactosyl_T_C	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT3	HGNC	ENSG00000158850	tier1	-	-	60	0	0.00	65	4	5.80
BAI3	0	genome.wustl.edu	37	6	70042868	70042868	+	Silent	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	70042868	70042868	A	G	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	silent	c.3156	p.G1052	0.981	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298	tier1	-	-	62	0	0.00	65	9	12.16
BCLAF1	0	genome.wustl.edu	37	6	136599172	136599172	+	Silent	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	136599172	136599172	G	T	SNP	BCLAF1	ENST00000531224	human	ensembl	74_37	-1	known	silent	c.847	p.R283	1.000	NULL	NULL	-	no_errors	BCLAF1	HGNC	ENSG00000029363	tier1	-	-	180	0	0.00	103	13	11.21
BCR	0	genome.wustl.edu	37	22	23656185	23656185	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	22	23656185	23656185	G	A	SNP	BCR	ENST00000305877	human	ensembl	74_37	+1	known	missense	c.3488	p.C1163Y	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,pfam_Bcr-Abl_oncoprot_oligo,pfam_DH-domain,pfam_C2_dom,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_DH-domain,superfamily_Bcr-Abl_oncoprot_oligo,superfamily_C2_dom,smart_DH-domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RhoGAP_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom,pfscan_DH-domain	-	no_errors	BCR	HGNC	ENSG00000186716	tier1	-	-	138	0	0.00	75	5	6.25
BEX1	0	genome.wustl.edu	37	X	102318197	102318197	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	X	102318197	102318197	C	A	SNP	BEX1	ENST00000372728	human	ensembl	74_37	-1	known	missense	c.6	p.E2D	0.022	pirsf_BEX	pfam_TF_A-like/BEX-like,pirsf_BEX	-	no_errors	BEX1	HGNC	ENSG00000133169				42	0	0.00	33	3	8.33
BZW1	0	genome.wustl.edu	37	2	201684807	201684807	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	201684807	201684807	A	G	SNP	BZW1	ENST00000409600	human	ensembl	74_37	+1	known	missense	c.1069	p.K357E	1.000	pfam_W2_domain,superfamily_ARM-type_fold,smart_W2_domain	pfam_W2_domain,superfamily_ARM-type_fold,smart_W2_domain	-	no_errors	BZW1	HGNC	ENSG00000082153				39	0	0.00	34	2	5.56
C12orf55	0	genome.wustl.edu	37	12	96958311	96958311	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	96958311	96958311	G	T	SNP	C12orf55	ENST00000524981	human	ensembl	74_37	+1	putative	nonsense	c.2476	p.G826*	0.000	NULL	superfamily_Fibronectin_type3	-	no_errors	C12orf55	HGNC	ENSG00000188596	tier1	-	-	50	0	0.00	23	6	20.69
C12orf61	0	genome.wustl.edu	37	12	62996769	62996769	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	62996769	62996769	C	T	SNP	C12orf61	ENST00000408887	human	ensembl	74_37	-1	known	missense	c.350	p.R117H	0.010	NULL	NULL	-	no_errors	C12orf61	HGNC	ENSG00000221949	tier1	-	-	76	0	0.00	48	4	7.69
C2orf15	0	genome.wustl.edu	37	2	99811355	99811355	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	99811355	99811355	G	A	SNP	C2orf15	ENST00000424491	human	ensembl	74_37	+1	known	missense	c.364	p.E122K	0.343	pfam_Ribosomal_L30_ferredoxin-like,superfamily_Ribosomal_L30_ferredoxin-like	pfam_Ribosomal_L30_ferredoxin-like,superfamily_Ribosomal_L30_ferredoxin-like	-	no_errors	C2orf15	HGNC	ENSG00000241962				60	0	0.00	42	3	6.67
C5orf34	0	genome.wustl.edu	37	5	43490755	43490755	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	5	43490755	43490755	A	G	SNP	C5orf34	ENST00000306862	human	ensembl	74_37	-1	known	missense	c.1657	p.S553P	0.001	NULL	NULL	-	no_errors	C5orf34	HGNC	ENSG00000172244	tier1	-	-	58	0	0.00	68	14	17.07
C8B	0	genome.wustl.edu	37	1	57431535	57431535	+	Silent	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	57431535	57431535	G	T	SNP	C8B	ENST00000371237	human	ensembl	74_37	-1	known	silent	c.87	p.G29	0.877	NULL	pfam_MACPF,pfam_LDrepeatLR_classA_rpt,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,pfscan_LDrepeatLR_classA_rpt,pfscan_Thrombospondin_1_rpt,prints_MAC_perforin	-	no_errors	C8B	HGNC	ENSG00000021852	tier1	-	-	33	0	0.00	26	6	18.75
C9orf89	0	genome.wustl.edu	37	9	95872944	95872944	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	95872944	95872944	G	A	SNP	C9orf89	ENST00000466409	human	ensembl	74_37	+1	known	missense	c.245	p.R82Q	0.990	superfamily_DEATH-like_dom	superfamily_DEATH-like_dom	-	no_errors	C9orf89	HGNC	ENSG00000165233	tier1	-	-	126	0	0.00	73	5	6.41
CACNA1D	0	genome.wustl.edu	37	3	53796067	53796067	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	53796067	53796067	G	A	SNP	CACNA1D	ENST00000288139	human	ensembl	74_37	+1	known	missense	c.3889	p.V1297I	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su,prints_LVDCC_a1dsu	-	no_errors	CACNA1D	HGNC	ENSG00000157388	tier1	-	-	29	0	0.00	19	10	34.48
CAPN11	0	genome.wustl.edu	37	6	44137711	44137711	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	44137711	44137711	C	T	SNP	CAPN11	ENST00000398776	human	ensembl	74_37	+1	known	silent	c.408	p.L136	0.239	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN11	HGNC	ENSG00000137225				69	0	0.00	73	4	5.19
CAPN6	0	genome.wustl.edu	37	X	110495608	110495608	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	X	110495608	110495608	T	A	SNP	CAPN6	ENST00000324068	human	ensembl	74_37	-1	known	missense	c.626	p.E209V	0.169	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,pfam_C2_dom,superfamily_Calpain_domain_III,superfamily_C2_dom,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_C2_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN6	HGNC	ENSG00000077274	tier1	-	-	39	0	0.00	32	4	11.11
CBLN4	0	genome.wustl.edu	37	20	54575877	54575878	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	20	54575877	54575878	-	A	INS	CBLN4	ENST00000064571	human	ensembl	74_37	-1	known	frame_shift_ins	c.318_317	p.T107fs	1.000:1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CBLN4	HGNC	ENSG00000054803	tier1			23	0	0.00	34	7	17.07
CBX3	0	genome.wustl.edu	37	7	26246030	26246030	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	26246030	26246030	G	T	SNP	CBX3	ENST00000337620	human	ensembl	74_37	+1	known	nonsense	c.67	p.E23*	1.000	superfamily_Chromodomain-like	pfam_Chromo_shadow_dom,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Chromo_shadow_dom,pfscan_Chromo_domain/shadow,prints_Chromo_dom_subgr	-	no_errors	CBX3	HGNC	ENSG00000122565	tier1	-	-	49	0	0.00	47	4	7.84
CCAR1	0	genome.wustl.edu	37	10	70507295	70507295	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	10	70507295	70507295	G	T	SNP	CCAR1	ENST00000265872	human	ensembl	74_37	+1	known	missense	c.798	p.Q266H	1.000	NULL	pfam_SAP_dom,superfamily_NA-bd_OB-fold,smart_SAP_dom,pfscan_SAP_dom	-	no_errors	CCAR1	HGNC	ENSG00000060339	tier1	-	-	99	0	0.00	74	4	5.13
CCDC112	0	genome.wustl.edu	37	5	114606915	114606915	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	5	114606915	114606915	C	A	SNP	CCDC112	ENST00000379611	human	ensembl	74_37	-1	known	nonsense	c.1327	p.E443*	1.000	NULL	superfamily_Homeodomain-like	-	no_errors	CCDC112	HGNC	ENSG00000164221	tier1	-	-	45	0	0.00	17	3	15.00
CCDC6	0	genome.wustl.edu	37	10	61566744	61566744	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	10	61566744	61566744	T	C	SNP	CCDC6	ENST00000263102	human	ensembl	74_37	-1	known	missense	c.940	p.R314G	1.000	pfam_DUF2046	pfam_DUF2046	-	no_errors	CCDC6	HGNC	ENSG00000108091				71	0	0.00	75	4	5.06
CCDC8	0	genome.wustl.edu	37	19	46915557	46915557	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	46915557	46915557	G	A	SNP	CCDC8	ENST00000307522	human	ensembl	74_37	-1	known	missense	c.511	p.R171C	0.718	NULL	NULL	-	no_errors	CCDC8	HGNC	ENSG00000169515	tier1	-	-	25	0	0.00	10	9	47.37
CCNC	0	genome.wustl.edu	37	6	100006343	100006343	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	100006343	100006343	C	T	SNP	CCNC	ENST00000482541	human	ensembl	74_37	-1	putative	missense	c.376	p.D126N	0.000	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNC	HGNC	ENSG00000112237	tier1	-	-	55	0	0.00	23	21	47.73
CD2	0	genome.wustl.edu	37	1	117311133	117311133	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	117311133	117311133	G	A	SNP	CD2	ENST00000369478	human	ensembl	74_37	+1	known	missense	c.784	p.G262S	0.000	NULL	pfam_Ig_C2-set,pfam_Ig_V-set,prints_CD2	-	no_errors	CD2	HGNC	ENSG00000116824	tier1	-	-	40	0	0.00	23	4	14.81
CD46	0	genome.wustl.edu	37	1	207930986	207930986	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	207930986	207930986	G	T	SNP	CD46	ENST00000322875	human	ensembl	74_37	+1	known	missense	c.388	p.G130C	0.941	pirsf_M_CF_CD46,pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pirsf_M_CF_CD46,pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CD46	HGNC	ENSG00000117335				63	0	0.00	57	4	6.56
CD5	0	genome.wustl.edu	37	11	60885646	60885646	+	Splice_Site	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	60885646	60885646	G	A	SNP	CD5	ENST00000347785	human	ensembl	74_37	+1	known	splice_site	c.95-1	e3-1	0.234	-	-	-	no_errors	CD5	HGNC	ENSG00000110448				58	0	0.00	38	2	5.00
CELP	0	genome.wustl.edu	37	9	135957946	135957946	+	RNA	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	135957946	135957946	C	T	SNP	CELP	ENST00000411440	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.622	-	-	-	no_errors	CELP	HGNC	ENSG00000170827	tier1	-	-	52	0	0.00	34	4	10.53
CELSR1	0	genome.wustl.edu	37	22	46760103	46760103	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	22	46760103	46760103	G	A	SNP	CELSR1	ENST00000262738	human	ensembl	74_37	-1	known	missense	c.8825	p.T2942M	0.775	NULL	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR1	HGNC	ENSG00000075275				48	0	0.00	36	3	7.69
CENPF	0	genome.wustl.edu	37	1	214814805	214814805	+	Nonsense_Mutation	SNP	A	A	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	214814805	214814805	A	T	SNP	CENPF	ENST00000366955	human	ensembl	74_37	+1	known	nonsense	c.3124	p.K1042*	0.812	NULL	pfam_Centromere_CenpF_N,pfam_Centromere_CenpF_leu-rich_rpt,pfam_CenpF/LEK1_Rb-prot-bd	-	no_errors	CENPF	HGNC	ENSG00000117724				30	0	0.00	29	2	6.45
CHD2	0	genome.wustl.edu	37	15	93485157	93485157	+	Silent	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	15	93485157	93485157	C	A	SNP	CHD2	ENST00000420239	human	ensembl	74_37	+1	known	silent	c.798	p.V266	0.997	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow	-	no_errors	CHD2	HGNC	ENSG00000173575				55	0	0.00	31	3	8.82
CHIA	0	genome.wustl.edu	37	1	111861155	111861155	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	111861155	111861155	C	T	SNP	CHIA	ENST00000343320	human	ensembl	74_37	+1	known	missense	c.770	p.A257V	0.992	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	pfam_Glyco_hydro18cat,pfam_Chitin-bd_dom,superfamily_Glycoside_hydrolase_SF,superfamily_Chitin-bd_dom,smart_Chitinase_II,smart_Chitin-bd_dom,pfscan_Chitin-bd_dom	-	no_errors	CHIA	HGNC	ENSG00000134216				54	0	0.00	28	3	9.68
CHL1	0	genome.wustl.edu	37	3	423958	423958	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	423958	423958	T	G	SNP	CHL1	ENST00000256509	human	ensembl	74_37	+1	known	missense	c.1973	p.I658S	0.147	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CHL1	HGNC	ENSG00000134121	tier1	-	-	65	0	0.00	36	6	14.29
CHPF2	0	genome.wustl.edu	37	7	150932498	150932498	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	150932498	150932498	G	A	SNP	CHPF2	ENST00000035307	human	ensembl	74_37	+1	known	missense	c.628	p.A210T	0.999	pfam_Fringe-like	pfam_Chond_GalNAc,pfam_Fringe-like	-	no_errors	CHPF2	HGNC	ENSG00000033100				38	0	0.00	34	2	5.41
CHRNG	0	genome.wustl.edu	37	2	233409225	233409225	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	233409225	233409225	G	A	SNP	CHRNG	ENST00000389494	human	ensembl	74_37	+1	known	missense	c.1184	p.R395H	0.985	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel	-	no_errors	CHRNG	HGNC	ENSG00000196811	tier1	-	-	56	0	0.00	37	12	24.49
CHST7	0	genome.wustl.edu	37	X	46433672	46433672	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	X	46433672	46433672	G	A	SNP	CHST7	ENST00000276055	human	ensembl	74_37	+1	known	silent	c.306	p.Q102	0.906	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST7	HGNC	ENSG00000147119	tier1	-	-	57	0	0.00	34	4	10.53
CLSTN3	0	genome.wustl.edu	37	12	7301683	7301683	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	7301683	7301683	G	A	SNP	CLSTN3	ENST00000266546	human	ensembl	74_37	+1	known	missense	c.1963	p.A655T	0.998	NULL	pfam_Cadherin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CLSTN3	HGNC	ENSG00000139182				47	0	0.00	46	4	8.00
CNGA1	0	genome.wustl.edu	37	4	47939078	47939078	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	4	47939078	47939078	C	T	SNP	CNGA1	ENST00000402813	human	ensembl	74_37	-1	known	missense	c.1640	p.R547H	0.980	superfamily_cNMP-bd-like	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGA1	HGNC	ENSG00000198515	tier1	-	-	28	0	0.00	23	10	30.30
CNRIP1	0	genome.wustl.edu	37	2	68544362	68544362	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	68544362	68544362	G	A	SNP	CNRIP1	ENST00000263655	human	ensembl	74_37	-1	known	missense	c.257	p.T86M	0.888	NULL	NULL	-	no_errors	CNRIP1	HGNC	ENSG00000119865	tier1	-	-	64	0	0.00	56	4	6.67
CNTNAP4	0	genome.wustl.edu	37	16	76592524	76592524	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	76592524	76592524	A	G	SNP	CNTNAP4	ENST00000307431	human	ensembl	74_37	+1	known	missense	c.3868	p.S1290G	1.000	NULL	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP4	HGNC	ENSG00000152910	tier1	-	-	53	0	0.00	36	5	12.20
COL11A2	0	genome.wustl.edu	37	6	33144959	33144959	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	33144959	33144959	T	G	SNP	COL11A2	ENST00000341947	human	ensembl	74_37	-1	known	missense	c.2015	p.K672T	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A2	HGNC	ENSG00000204248	tier1	-	-	41	0	0.00	23	5	17.86
CSMD2	0	genome.wustl.edu	37	1	34238271	34238271	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	34238271	34238271	G	T	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	missense	c.1745	p.T582K	0.946	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904				34	0	0.00	31	4	11.43
CSTF2	0	genome.wustl.edu	37	X	100081702	100081702	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	X	100081702	100081702	C	T	SNP	CSTF2	ENST00000415585	human	ensembl	74_37	+1	known	missense	c.782	p.P261L	0.279	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CSTF2	HGNC	ENSG00000101811				49	0	0.00	41	4	8.89
CT47B1	0	genome.wustl.edu	37	X	120008762	120008762	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	X	120008762	120008762	C	T	SNP	CT47B1	ENST00000371311	human	ensembl	74_37	-1	known	missense	c.763	p.V255M	0.000	NULL	NULL	-	no_errors	CT47B1	HGNC	ENSG00000236446	tier1	-	-	86	0	0.00	79	5	5.88
CXXC11	0	genome.wustl.edu	37	2	242815414	242815414	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	242815414	242815414	G	A	SNP	CXXC11	ENST00000343216	human	ensembl	74_37	+1	known	silent	c.1707	p.P569	0.004	NULL	NULL	-	no_errors	CXXC11	HGNC	ENSG00000188011	tier1	-	-	97	0	0.00	51	7	12.07
CYP4A22	0	genome.wustl.edu	37	1	47609456	47609456	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	47609456	47609456	G	A	SNP	CYP4A22	ENST00000371891	human	ensembl	74_37	+1	known	missense	c.658	p.A220T	0.382	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-II,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP4A22	HGNC	ENSG00000162365				105	0	0.00	63	4	5.97
D2HGDH	0	genome.wustl.edu	37	2	242681948	242681948	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	242681948	242681948	C	T	SNP	D2HGDH	ENST00000321264	human	ensembl	74_37	+1	known	missense	c.449	p.T150I	1.000	pfam_Oxid_FAD_bind_N,superfamily_FAD-bd_2	pfam_FAD-linked_oxidase_C,pfam_Oxid_FAD_bind_N,superfamily_FAD-bd_2,superfamily_FAD-linked_Oxase-like_C	-	no_errors	D2HGDH	HGNC	ENSG00000180902				15	0	0.00	17	4	19.05
DACT2	0	genome.wustl.edu	37	6	168708819	168708819	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	168708819	168708819	G	C	SNP	DACT2	ENST00000366795	human	ensembl	74_37	-1	known	missense	c.1618	p.P540A	0.000	NULL	NULL	-	no_errors	DACT2	HGNC	ENSG00000164488	tier1	-	-	86	0	0.00	63	6	8.70
DCDC1	0	genome.wustl.edu	37	11	31263095	31263095	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	31263095	31263095	C	A	SNP	DCDC1	ENST00000597505	human	ensembl	74_37	-1	putative	nonsense	c.1123	p.G375*	1.000	NULL	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Doublecortin_dom,pfscan_Doublecortin_dom,pfscan_Ricin_B_lectin	-	no_errors	DCDC1	HGNC	ENSG00000170959	tier1	-	-	72	0	0.00	53	8	13.11
DCLK3	0	genome.wustl.edu	37	3	36779750	36779750	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	36779750	36779750	C	T	SNP	DCLK3	ENST00000416516	human	ensembl	74_37	-1	known	missense	c.401	p.G134D	0.553	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK3	HGNC	ENSG00000163673				43	0	0.00	38	3	7.32
DCLRE1A	0	genome.wustl.edu	37	10	115609026	115609026	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	10	115609026	115609026	T	C	SNP	DCLRE1A	ENST00000361384	human	ensembl	74_37	-1	known	missense	c.1838	p.D613G	0.907	NULL	pfam_DRMBL	-	no_errors	DCLRE1A	HGNC	ENSG00000198924	tier1	-	-	54	0	0.00	39	6	13.33
DCST1	0	genome.wustl.edu	37	1	155013913	155013913	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	155013913	155013913	C	A	SNP	DCST1	ENST00000295542	human	ensembl	74_37	+1	known	missense	c.572	p.S191Y	0.730	NULL	pfam_DC_STAMP-like,pfscan_Znf_RING	-	no_errors	DCST1	HGNC	ENSG00000163357	tier1	-	-	46	0	0.00	48	12	20.00
DDB2	0	genome.wustl.edu	37	11	47254427	47254427	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	47254427	47254427	C	T	SNP	DDB2	ENST00000256996	human	ensembl	74_37	+1	known	silent	c.519	p.Y173	0.990	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DDB2	HGNC	ENSG00000134574	tier1	-	-	55	0	0.00	45	4	8.16
DECR1	0	genome.wustl.edu	37	8	91063956	91063956	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	91063956	91063956	G	T	SNP	DECR1	ENST00000220764	human	ensembl	74_37	+1	known	missense	c.937	p.D313Y	0.031	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH	-	no_errors	DECR1	HGNC	ENSG00000104325	tier1	-	-	73	0	0.00	59	4	6.35
DGKI	0	genome.wustl.edu	37	7	137075144	137075144	+	RNA	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	137075144	137075144	A	G	SNP	DGKI	ENST00000494390	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DGKI	HGNC	ENSG00000157680	tier1	-	-	37	0	0.00	12	5	29.41
DNAH5	0	genome.wustl.edu	37	5	13845021	13845021	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	5	13845021	13845021	C	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	silent	c.5196	p.A1732	0.464	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	56	0	0.00	47	26	35.62
DNAH9	0	genome.wustl.edu	37	17	11573044	11573044	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	11573044	11573044	C	A	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.3286	p.L1096M	0.937	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	tier1	-	-	27	0	0.00	32	7	17.95
DNAH9	0	genome.wustl.edu	37	17	11840831	11840831	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	11840831	11840831	G	A	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.12652	p.E4218K	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	tier1	-	-	61	0	0.00	41	11	21.15
DOCK10	0	genome.wustl.edu	37	2	225662608	225662608	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	225662608	225662608	T	C	SNP	DOCK10	ENST00000258390	human	ensembl	74_37	-1	known	missense	c.4585	p.N1529D	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK10	HGNC	ENSG00000135905	tier1	-	-	68	0	0.00	38	8	17.39
DOCK11	0	genome.wustl.edu	37	X	117814625	117814625	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	X	117814625	117814625	G	T	SNP	DOCK11	ENST00000276202	human	ensembl	74_37	+1	known	nonsense	c.5641	p.E1881*	1.000	pfam_DOCK_C	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK11	HGNC	ENSG00000147251				53	0	0.00	39	4	9.30
DPCR1	0	genome.wustl.edu	37	6	30917649	30917649	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	30917649	30917649	G	A	SNP	DPCR1	ENST00000462446	human	ensembl	74_37	+1	novel	missense	c.1408	p.E470K	0.748	NULL	NULL	-	no_errors	DPCR1	HGNC	ENSG00000168631	tier1	-	-	88	0	0.00	73	5	6.41
DPP9	0	genome.wustl.edu	37	19	4703929	4703929	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	4703929	4703929	G	A	SNP	DPP9	ENST00000262960	human	ensembl	74_37	-1	known	silent	c.738	p.G246	0.858	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_X-Pro-like_dom	-	no_errors	DPP9	HGNC	ENSG00000142002	tier1	-	-	108	0	0.00	17	28	60.87
DPRX	0	genome.wustl.edu	37	19	54140176	54140176	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	54140176	54140176	A	C	SNP	DPRX	ENST00000376650	human	ensembl	74_37	+1	known	missense	c.510	p.Q170H	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	DPRX	HGNC	ENSG00000204595	tier1	-	-	30	0	0.00	10	27	72.97
DPY19L2	0	genome.wustl.edu	37	12	64062089	64062089	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	64062089	64062089	G	A	SNP	DPY19L2	ENST00000324472	human	ensembl	74_37	-1	known	missense	c.85	p.R29W	0.031	NULL	pfam_Dpy-19	-	no_errors	DPY19L2	HGNC	ENSG00000177990				82	0	0.00	62	4	6.06
DSEL	0	genome.wustl.edu	37	18	65179637	65179637	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	18	65179637	65179637	C	A	SNP	DSEL	ENST00000310045	human	ensembl	74_37	-1	known	missense	c.2239	p.A747S	1.000	NULL	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,superfamily_Chondroitin_lyas	-	no_errors	DSEL	HGNC	ENSG00000171451	tier1	-	-	29	0	0.00	13	4	23.53
DST	0	genome.wustl.edu	37	6	56480682	56480682	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	56480682	56480682	C	T	SNP	DST	ENST00000370765	human	ensembl	74_37	-1	known	missense	c.7583	p.G2528D	0.004	smart_Plectin_repeat	pfam_Plectin_repeat,pfam_Spectrin_repeat,superfamily_Ig/albumin-bd,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	42	0	0.00	50	4	7.41
DYNC2H1	0	genome.wustl.edu	37	11	103104821	103104821	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	103104821	103104821	G	T	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	nonsense	c.9499	p.E3167*	0.995	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	68	0	0.00	58	5	7.94
EDNRB	0	genome.wustl.edu	37	13	78492294	78492294	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	13	78492294	78492294	A	C	SNP	EDNRB	ENST00000334286	human	ensembl	74_37	-1	known	missense	c.415	p.L139V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ETB_rcpt,prints_Endthln_rcpt,prints_GPCR_Rhodpsn,prints_Bombsn_rcpt	-	no_errors	EDNRB	HGNC	ENSG00000136160	tier1	rs143042375	-	93	0	0.00	54	24	30.77
EEF2K	0	genome.wustl.edu	37	16	22295238	22295238	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	22295238	22295238	C	T	SNP	EEF2K	ENST00000263026	human	ensembl	74_37	+1	known	missense	c.2099	p.A700V	1.000	pirsf_Elongation_factor_2_kinase	pfam_MHCK_EF2_kinase,pfam_Sel1-like,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pirsf_Elongation_factor_2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	EEF2K	HGNC	ENSG00000103319	tier1	-	-	82	0	0.00	69	4	5.48
EIF3H	0	genome.wustl.edu	37	8	117658786	117658786	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	117658786	117658786	C	T	SNP	EIF3H	ENST00000521861	human	ensembl	74_37	-1	known	silent	c.885	p.P295	0.030	NULL	pfam_JAB_MPN_dom,smart_JAB_MPN_dom	-	no_errors	EIF3H	HGNC	ENSG00000147677	tier1	-	-	79	0	0.00	34	19	35.85
EMP3	0	genome.wustl.edu	37	19	48830165	48830165	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	48830165	48830165	G	T	SNP	EMP3	ENST00000270221	human	ensembl	74_37	+1	known	missense	c.64	p.A22S	1.000	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_EMP_3,prints_PMP22_EMP_MP20	-	no_errors	EMP3	HGNC	ENSG00000142227				52	0	0.00	31	2	6.06
ENSG00000212030	0	genome.wustl.edu	37	11	76589350	76589350	+	RNA	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	76589350	76589350	C	T	SNP	ENSG00000212030	ENST00000390741	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.017	-	-	-	no_errors	AP002498.1	Clone_based_ensembl_gene	ENSG00000212030	tier1	-	-	41	0	0.00	43	11	20.37
ENSG00000214581	0	genome.wustl.edu	37	16	34682141	34682141	+	RNA	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	34682141	34682141	T	C	SNP	ENSG00000214581	ENST00000568619	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.931	-	-	-	no_errors	RP11-80F22.10	Clone_based_vega_gene	ENSG00000214581	tier1	-	-	107	0	0.00	61	7	10.29
ENSG00000221136	0	genome.wustl.edu	37	4	176394154	176394154	+	RNA	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	4	176394154	176394154	G	A	SNP	ENSG00000221136	ENST00000408209	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.010	-	-	-	no_errors	AC131094.1	Clone_based_ensembl_gene	ENSG00000221136	tier1	-	-	72	0	0.00	38	6	13.64
ENSG00000225411	0	genome.wustl.edu	37	9	68400475	68400475	+	RNA	SNP	T	T	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	68400475	68400475	T	G	SNP	ENSG00000225411	ENST00000417843	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	RP11-764K9.1	Clone_based_vega_gene	ENSG00000225411	tier1	rs75317582	-	27	0	0.00	27	9	25.00
ENSG00000233620	0	genome.wustl.edu	37	1	216246190	216246191	+	RNA	DEL	TG	TG	-			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	216246190	216246191	TG	-	DEL	ENSG00000233620	ENST00000445619	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.002	-	-	-	no_errors	RP11-22M7.2	Clone_based_vega_gene	ENSG00000233620	tier1			21	0	0.00	10	3	23.08
ENSG00000261711	0	genome.wustl.edu	37	16	34712338	34712338	+	RNA	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	34712338	34712338	T	C	SNP	ENSG00000261711	ENST00000569028	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.050	-	-	-	no_errors	RP11-80F22.9	Clone_based_vega_gene	ENSG00000261711	tier1	-	-	54	0	0.00	30	11	26.83
EPB41L2	0	genome.wustl.edu	37	6	131229998	131229998	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	131229998	131229998	C	G	SNP	EPB41L2	ENST00000337057	human	ensembl	74_37	-1	known	missense	c.816	p.W272C	1.000	pirsf_Band_41_protein,pfam_FERM_N,smart_Band_41_domain,pfscan_FERM_domain	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like,pfscan_FERM_domain	-	no_errors	EPB41L2	HGNC	ENSG00000079819	tier1	-	-	109	0	0.00	85	7	7.61
EPHA6	0	genome.wustl.edu	37	3	97185278	97185278	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	97185278	97185278	G	C	SNP	EPHA6	ENST00000502694	human	ensembl	74_37	+1	known	missense	c.22	p.V8L	0.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	EPHA6	HGNC	ENSG00000080224	tier1	-	-	40	0	0.00	22	5	18.52
EPN1	0	genome.wustl.edu	37	19	56206211	56206211	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	56206211	56206211	A	G	SNP	EPN1	ENST00000411543	human	ensembl	74_37	+1	known	missense	c.1642	p.T548A	0.345	NULL	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN1	HGNC	ENSG00000063245				100	0	0.00	56	4	6.56
ERCC6L2	0	genome.wustl.edu	37	9	98678666	98678666	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	98678666	98678666	A	G	SNP	ERCC6L2	ENST00000437817	human	ensembl	74_37	+1	known	missense	c.574	p.R192G	0.999	pfam_SNF2_N,superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6L2	HGNC	ENSG00000182150	tier1	-	-	84	0	0.00	65	4	5.80
ERP27	0	genome.wustl.edu	37	12	15068588	15068588	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	15068588	15068588	T	G	SNP	ERP27	ENST00000266397	human	ensembl	74_37	-1	known	missense	c.609	p.K203N	0.004	superfamily_Thioredoxin-like_fold	superfamily_Thioredoxin-like_fold	-	no_errors	ERP27	HGNC	ENSG00000139055	tier1	-	-	76	0	0.00	41	18	30.51
ETV3	0	genome.wustl.edu	37	1	157095505	157095505	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	157095505	157095505	G	T	SNP	ETV3	ENST00000368192	human	ensembl	74_37	-1	known	missense	c.667	p.Q223K	0.999	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ETV3	HGNC	ENSG00000117036	tier1	-	-	53	0	0.00	56	4	6.67
EYA2	0	genome.wustl.edu	37	20	45771716	45771716	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	20	45771716	45771716	C	T	SNP	EYA2	ENST00000327619	human	ensembl	74_37	+1	known	missense	c.907	p.R303C	0.999	pfam_HAD-like_dom,tigrfam_EYA	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA2	HGNC	ENSG00000064655				31	0	0.00	49	3	5.77
EZH2	0	genome.wustl.edu	37	7	148524336	148524336	+	Silent	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	148524336	148524336	C	A	SNP	EZH2	ENST00000320356	human	ensembl	74_37	-1	known	silent	c.648	p.R216	1.000	smart_SANT/Myb	pfam_SET_dom,pfam_EZH2_WD-Binding,superfamily_Homeodomain-like,smart_SANT/Myb,smart_SET_dom,pfscan_SET_dom	-	no_errors	EZH2	HGNC	ENSG00000106462	tier1	-	-	60	0	0.00	73	4	5.19
F2R	0	genome.wustl.edu	37	5	76028151	76028151	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	5	76028151	76028151	C	T	SNP	F2R	ENST00000319211	human	ensembl	74_37	+1	known	missense	c.101	p.T34I	0.003	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Thrmbn_rcpt,prints_GPCR_Rhodpsn,prints_Protea_act_rcpt	-	no_errors	F2R	HGNC	ENSG00000181104	tier1	-	-	48	0	0.00	13	9	40.91
FAAH2	0	genome.wustl.edu	37	X	57313372	57313372	+	Silent	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	X	57313372	57313372	A	G	SNP	FAAH2	ENST00000374900	human	ensembl	74_37	+1	known	silent	c.114	p.S38	0.033	superfamily_Amidase_dom	pfam_Amidase,superfamily_Amidase_dom	-	no_errors	FAAH2	HGNC	ENSG00000165591	tier1	-	-	48	0	0.00	43	5	10.42
FAM166B	0	genome.wustl.edu	37	9	35562544	35562544	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	35562544	35562544	C	T	SNP	FAM166B	ENST00000399742	human	ensembl	74_37	-1	novel	missense	c.572	p.R191H	1.000	pfam_UPF0573/UPF0605	pfam_UPF0573/UPF0605	-	no_errors	FAM166B	HGNC	ENSG00000215187				73	0	0.00	41	4	8.89
FAM230A	0	genome.wustl.edu	37	22	20708880	20708880	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	22	20708880	20708880	C	T	SNP	FAM230A	ENST00000434783	human	ensembl	74_37	+1	known	silent	c.612	p.N204	0.733	superfamily_Kinase-like_dom	pfam_Ret-finger_pr-like_3_antisense,superfamily_Kinase-like_dom	-	no_errors	FAM230A	HGNC	ENSG00000188280	tier1	-	-	94	0	0.00	41	17	29.31
FAM46A	0	genome.wustl.edu	37	6	82461324	82461324	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	82461324	82461324	T	C	SNP	FAM46A	ENST00000369754	human	ensembl	74_37	-1	known	missense	c.592	p.T198A	1.000	pfam_DUF1693	pfam_DUF1693	-	no_errors	FAM46A	HGNC	ENSG00000112773	tier1	-	-	44	0	0.00	24	4	14.29
FAM65B	0	genome.wustl.edu	37	6	24843687	24843687	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	24843687	24843687	G	T	SNP	FAM65B	ENST00000259698	human	ensembl	74_37	-1	known	nonsense	c.1323	p.C441*	0.002	NULL	superfamily_ARM-type_fold	-	no_errors	FAM65B	HGNC	ENSG00000111913	tier1	-	-	98	0	0.00	74	4	5.13
FGD5P1	0	genome.wustl.edu	37	3	13978095	13978095	+	RNA	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	13978095	13978095	G	A	SNP	FGD5P1	ENST00000502451	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.691	-	-	-	no_errors	FGD5P1	HGNC	ENSG00000250439	tier1	-	-	25	0	0.00	23	4	14.81
FLI1	0	genome.wustl.edu	37	11	128680809	128680809	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	128680809	128680809	G	C	SNP	FLI1	ENST00000527786	human	ensembl	74_37	+1	known	missense	c.1285	p.G429R	0.946	NULL	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	FLI1	HGNC	ENSG00000151702				37	0	0.00	25	3	10.71
FLJ36000	0	genome.wustl.edu	37	17	21911267	21911268	+	RNA	DEL	TG	TG	-			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	21911267	21911268	TG	0	DEL	FLJ36000	ENST00000581223	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.024:0.043	-	-	-	no_errors	RP11-744K17.9	Clone_based_vega_gene	ENSG00000266795				9	0	0.00	6	3	33.33
FMR1	0	genome.wustl.edu	37	X	147011714	147011714	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	X	147011714	147011714	C	G	SNP	FMR1	ENST00000370475	human	ensembl	74_37	+1	known	missense	c.581	p.T194S	1.000	NULL	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet-like_dom,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FMR1	HGNC	ENSG00000102081	tier1	-	-	30	0	0.00	31	4	11.43
FN1	0	genome.wustl.edu	37	2	216264040	216264040	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	216264040	216264040	G	A	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	silent	c.3288	p.T1096	0.074	pfam_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414	tier1	-	-	39	0	0.00	24	4	14.29
GABRP	0	genome.wustl.edu	37	5	170224476	170224476	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	5	170224476	170224476	G	A	SNP	GABRP	ENST00000265294	human	ensembl	74_37	+1	known	silent	c.465	p.T155	0.001	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAp_rcpt,prints_GABAA_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRP	HGNC	ENSG00000094755				88	0	0.00	36	2	5.26
GBP1	0	genome.wustl.edu	37	1	89520498	89520498	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	89520498	89520498	C	G	SNP	GBP1	ENST00000370473	human	ensembl	74_37	-1	known	missense	c.1532	p.R511T	0.000	pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	pfam_Guanylate-bd_C,pfam_Guanylate-bd_N,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP1	HGNC	ENSG00000117228	tier1	-	-	81	0	0.00	50	7	12.28
GDF6	0	genome.wustl.edu	37	8	97157145	97157145	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	97157145	97157145	G	A	SNP	GDF6	ENST00000287020	human	ensembl	74_37	-1	known	silent	c.1014	p.F338	0.896	NULL	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C	-	no_errors	GDF6	HGNC	ENSG00000156466	tier1	-	-	42	0	0.00	16	6	27.27
GFOD2	0	genome.wustl.edu	37	16	67719533	67719533	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	67719533	67719533	G	T	SNP	GFOD2	ENST00000268797	human	ensembl	74_37	-1	known	missense	c.86	p.T29N	0.940	pfam_Oxidoreductase_N	pfam_Oxidoreductase_N	-	no_errors	GFOD2	HGNC	ENSG00000141098	tier1	-	-	53	0	0.00	33	4	10.81
GFOD2	0	genome.wustl.edu	37	16	67709267	67709267	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	67709267	67709267	A	G	SNP	GFOD2	ENST00000268797	human	ensembl	74_37	-1	known	missense	c.949	p.S317P	1.000	NULL	pfam_Oxidoreductase_N	-	no_errors	GFOD2	HGNC	ENSG00000141098				90	0	0.00	85	5	5.56
GLI1	0	genome.wustl.edu	37	12	57861915	57861915	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	57861915	57861915	G	A	SNP	GLI1	ENST00000228682	human	ensembl	74_37	+1	known	missense	c.1216	p.A406T	0.994	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI1	HGNC	ENSG00000111087	tier1	-	-	33	0	0.00	25	4	13.79
GLYCTK	0	genome.wustl.edu	37	3	52327061	52327061	+	Splice_Site	SNP	G	G	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	52327061	52327061	G	C	SNP	GLYCTK	ENST00000305690	human	ensembl	74_37	+1	known	splice_site	c.1016-1	e5-1	0.041	-	-	-	no_errors	GLYCTK	HGNC	ENSG00000168237	tier1	-	-	30	0	0.00	19	3	13.64
GOLGA8M	0	genome.wustl.edu	37	15	28953410	28953410	+	Silent	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	15	28953410	28953410	G	T	SNP	GOLGA8M	ENST00000340249	human	ensembl	74_37	-1	known	silent	c.15	p.V5	0.293	NULL	NULL	-	no_errors	GOLGA8M	HGNC	ENSG00000188626	tier1	-	-	202	0	0.00	84	38	31.15
GPR126	0	genome.wustl.edu	37	6	142689023	142689023	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	142689023	142689023	G	T	SNP	GPR126	ENST00000367609	human	ensembl	74_37	+1	known	missense	c.421	p.G141C	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_GPCR_2_secretin-like,pfam_CUB_dom,pfam_GPS_dom,pfam_Pentaxin,superfamily_CUB_dom,superfamily_ConA-like_lec_gl_sf,smart_CUB_dom,smart_Pentaxin,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR126	HGNC	ENSG00000112414				16	0	0.00	18	3	14.29
GPR139	0	genome.wustl.edu	37	16	20084821	20084821	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	20084821	20084821	C	T	SNP	GPR139	ENST00000570682	human	ensembl	74_37	-1	known	missense	c.118	p.G40S	1.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPR139	HGNC	ENSG00000180269	tier1	-	-	138	0	0.00	45	36	44.44
GRIK3	0	genome.wustl.edu	37	1	37270590	37270591	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	37270590	37270591	-	CT	INS	GRIK3	ENST00000373091	human	ensembl	74_37	-1	known	frame_shift_ins	c.2563_2562	p.Q854fs	1.000:1.000	NULL	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK3	HGNC	ENSG00000163873	tier1			35	0	0.00	20	6	23.08
GRIK4	0	genome.wustl.edu	37	11	120827629	120827629	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	120827629	120827629	G	A	SNP	GRIK4	ENST00000527524	human	ensembl	74_37	+1	known	missense	c.1841	p.R614H	0.980	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK4	HGNC	ENSG00000149403	tier1	-	-	94	0	0.00	43	15	25.86
GRN	0	genome.wustl.edu	37	17	42428797	42428797	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	42428797	42428797	C	T	SNP	GRN	ENST00000053867	human	ensembl	74_37	+1	known	missense	c.902	p.S301L	0.024	pfam_Granulin,smart_Granulin	pfam_Granulin,smart_Granulin	-	no_errors	GRN	HGNC	ENSG00000030582	tier1	-	-	67	0	0.00	44	6	12.00
GSTM5	0	genome.wustl.edu	37	1	110256361	110256361	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	110256361	110256361	G	A	SNP	GSTM5	ENST00000369812	human	ensembl	74_37	+1	known	missense	c.395	p.R132K	0.004	pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like	pfam_Glutathione_S-Trfase_N,pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_GST_mu	-	no_errors	GSTM5	HGNC	ENSG00000134201	tier1	-	-	76	0	0.00	45	6	11.76
HAP1	0	genome.wustl.edu	37	17	39884552	39884552	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	39884552	39884552	C	T	SNP	HAP1	ENST00000310778	human	ensembl	74_37	-1	known	silent	c.1101	p.S367	0.002	pfam_HAP1_N	pfam_HAP1_N	-	no_errors	HAP1	HGNC	ENSG00000173805	tier1	-	-	74	0	0.00	84	19	18.45
HAPLN3	0	genome.wustl.edu	37	15	89422500	89422500	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	15	89422500	89422500	C	A	SNP	HAPLN3	ENST00000359595	human	ensembl	74_37	-1	known	missense	c.494	p.G165V	1.000	pfam_Link,smart_Link	pfam_Link,pfam_Ig_V-set,superfamily_C-type_lectin_fold,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Link,pfscan_Link,pfscan_Ig-like_dom,prints_Link	-	no_errors	HAPLN3	HGNC	ENSG00000140511	tier1	-	-	122	0	0.00	25	37	59.68
HERC2P8	0	genome.wustl.edu	37	16	33123821	33123821	+	RNA	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	33123821	33123821	A	G	SNP	HERC2P8	ENST00000567073	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.978	-	-	-	no_errors	HERC2P8	HGNC	ENSG00000261599	tier1	-	-	384	0	0.00	205	36	14.94
HHAT	0	genome.wustl.edu	37	1	210796984	210796984	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	210796984	210796984	A	G	SNP	HHAT	ENST00000391905	human	ensembl	74_37	+1	known	missense	c.1360	p.K454E	0.977	NULL	pfam_MBOAT_fam	-	no_errors	HHAT	HGNC	ENSG00000054392	tier1	-	-	109	0	0.00	97	21	17.80
HN1L	0	genome.wustl.edu	37	16	1748984	1748984	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	1748984	1748984	C	T	SNP	HN1L	ENST00000248098	human	ensembl	74_37	+1	known	silent	c.558	p.S186	1.000	NULL	NULL	-	no_errors	HN1L	HGNC	ENSG00000206053	tier1	-	-	121	0	0.00	56	4	6.67
HNRNPM	0	genome.wustl.edu	37	19	8551084	8551084	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	8551084	8551084	G	C	SNP	HNRNPM	ENST00000325495	human	ensembl	74_37	+1	known	missense	c.1772	p.R591P	1.000	NULL	pfam_RRM_dom,pfam_HnRNP_M_PY-NLS,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPM	HGNC	ENSG00000099783	tier1	-	-	62	0	0.00	33	5	13.16
HRNR	0	genome.wustl.edu	37	1	152191913	152191913	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	152191913	152191913	G	A	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	missense	c.2192	p.S731F	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915	tier1	-	-	131	0	0.00	91	20	18.02
HS1BP3	0	genome.wustl.edu	37	2	20824580	20824580	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	20824580	20824580	G	T	SNP	HS1BP3	ENST00000304031	human	ensembl	74_37	-1	known	missense	c.696	p.D232E	0.914	NULL	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	HS1BP3	HGNC	ENSG00000118960	tier1	-	-	77	0	0.00	52	5	8.77
HS3ST3A1	0	genome.wustl.edu	37	17	13503953	13503953	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	13503953	13503953	G	A	SNP	HS3ST3A1	ENST00000284110	human	ensembl	74_37	-1	known	missense	c.494	p.T165M	1.000	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST3A1	HGNC	ENSG00000153976				42	0	0.00	20	4	16.67
HSPH1	0	genome.wustl.edu	37	13	31725825	31725825	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	13	31725825	31725825	G	T	SNP	HSPH1	ENST00000445273	human	ensembl	74_37	-1	known	missense	c.590	p.P197H	1.000	pfam_Hsp_70_fam,pfam_MreB_Mrl	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPH1	HGNC	ENSG00000120694				46	0	0.00	33	3	8.33
IFT140	0	genome.wustl.edu	37	16	1570179	1570179	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	1570179	1570179	C	A	SNP	IFT140	ENST00000426508	human	ensembl	74_37	-1	known	missense	c.3826	p.G1276W	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	IFT140	HGNC	ENSG00000187535	tier1	-	-	53	0	0.00	33	5	13.16
IGFN1	0	genome.wustl.edu	37	1	201181077	201181077	+	Silent	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	201181077	201181077	A	G	SNP	IGFN1	ENST00000335211	human	ensembl	74_37	+1	known	silent	c.7056	p.P2352	0.001	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGFN1	HGNC	ENSG00000163395	tier1	-	-	87	0	0.00	52	18	25.71
IL17RC	0	genome.wustl.edu	37	3	9975157	9975157	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	9975157	9975157	G	A	SNP	IL17RC	ENST00000295981	human	ensembl	74_37	+1	known	silent	c.2256	p.A752	0.000	NULL	pfam_SEFIR	-	no_errors	IL17RC	HGNC	ENSG00000163702	tier1	-	-	20	0	0.00	8	4	33.33
IL1RAPL1	0	genome.wustl.edu	37	X	29938112	29938112	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	X	29938112	29938112	A	C	SNP	IL1RAPL1	ENST00000302196	human	ensembl	74_37	+1	known	missense	c.958	p.I320L	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_TIR_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_TIR_dom,smart_Ig_sub,smart_Ig_sub2,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom	-	no_errors	IL1RAPL1	HGNC	ENSG00000169306	tier1	-	-	56	0	0.00	15	28	65.12
INHBC	0	genome.wustl.edu	37	12	57843760	57843760	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	57843760	57843760	G	T	SNP	INHBC	ENST00000309668	human	ensembl	74_37	+1	known	missense	c.1014	p.K338N	1.000	pfam_TGF-b_C,smart_TGF-b_C	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_betaC	-	no_errors	INHBC	HGNC	ENSG00000175189				40	0	0.00	27	2	6.90
IPO8	0	genome.wustl.edu	37	12	30789961	30789961	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	30789961	30789961	G	A	SNP	IPO8	ENST00000256079	human	ensembl	74_37	-1	known	missense	c.2650	p.R884W	0.873	superfamily_ARM-type_fold	pfam_Importin-beta_N,pfam_Cse1,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	IPO8	HGNC	ENSG00000133704	tier1	-	-	30	0	0.00	29	4	12.12
ITGAL	0	genome.wustl.edu	37	16	30522438	30522438	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	30522438	30522438	A	T	SNP	ITGAL	ENST00000356798	human	ensembl	74_37	+1	known	missense	c.2767	p.I923F	0.774	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,prints_Integrin_alpha,pfscan_VWF_A	-	no_errors	ITGAL	HGNC	ENSG00000005844	tier1	-	-	79	0	0.00	51	4	7.27
KCNH8	0	genome.wustl.edu	37	3	19295323	19295323	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	19295323	19295323	A	C	SNP	KCNH8	ENST00000328405	human	ensembl	74_37	+1	known	missense	c.254	p.K85T	1.000	pfam_PAS_fold_3,pfam_PAS_4,pfam_PAS_fold,superfamily_PAS,tigrfam_PAS	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_4,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,superfamily_tRNA-bd_arm,smart_PAC,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,pfscan_PAS-assoc_C,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,prints_K_chnl_volt-dep_EAG,tigrfam_PAS	-	no_errors	KCNH8	HGNC	ENSG00000183960	tier1	-	-	43	0	0.00	19	9	32.14
KCNJ8	0	genome.wustl.edu	37	12	21919003	21919003	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	21919003	21919003	C	G	SNP	KCNJ8	ENST00000240662	human	ensembl	74_37	-1	known	missense	c.929	p.R310P	0.997	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir6.1	-	no_errors	KCNJ8	HGNC	ENSG00000121361	tier1	-	-	50	0	0.00	35	4	10.26
KCNN1	0	genome.wustl.edu	37	19	18099331	18099331	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	18099331	18099331	G	T	SNP	KCNN1	ENST00000222249	human	ensembl	74_37	+1	known	missense	c.1167	p.K389N	1.000	pfam_CaM-bd_dom,superfamily_CaM-bd_dom	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN1	HGNC	ENSG00000105642	tier1	-	-	57	0	0.00	51	4	7.27
KCNT2	0	genome.wustl.edu	37	1	196459008	196459008	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	196459008	196459008	T	A	SNP	KCNT2	ENST00000294725	human	ensembl	74_37	-1	known	missense	c.235	p.I79F	1.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom	-	no_errors	KCNT2	HGNC	ENSG00000162687	tier1	-	-	45	0	0.00	32	41	56.16
KIAA0319	0	genome.wustl.edu	37	6	24570135	24570135	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	24570135	24570135	C	T	SNP	KIAA0319	ENST00000378214	human	ensembl	74_37	-1	known	missense	c.1987	p.V663I	0.143	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_Fibronectin_type3,smart_PKD/Chitinase_dom	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_MANSC_N,smart_Fibronectin_type3,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319	HGNC	ENSG00000137261	tier1	-	-	57	0	0.00	29	17	36.96
KIF1B	0	genome.wustl.edu	37	1	10356961	10356961	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	10356961	10356961	G	A	SNP	KIF1B	ENST00000263934	human	ensembl	74_37	+1	known	missense	c.1730	p.R577H	1.000	pfam_FHA_dom,superfamily_SMAD_FHA_domain	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523				40	0	0.00	28	2	6.67
KIF23	0	genome.wustl.edu	37	15	69732685	69732685	+	Silent	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	15	69732685	69732685	T	C	SNP	KIF23	ENST00000260363	human	ensembl	74_37	+1	known	silent	c.1926	p.N642	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF23	HGNC	ENSG00000137807				22	0	0.00	18	2	10.00
KIF6	0	genome.wustl.edu	37	6	39693059	39693059	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	39693059	39693059	C	T	SNP	KIF6	ENST00000287152	human	ensembl	74_37	-1	known	missense	c.28	p.A10T	1.000	superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF6	HGNC	ENSG00000164627	tier1	-	-	57	0	0.00	36	7	16.28
KIT	0	genome.wustl.edu	37	4	55594207	55594207	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	4	55594207	55594207	T	C	SNP	KIT	ENST00000288135	human	ensembl	74_37	+1	known	missense	c.1910	p.L637P	1.000	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	KIT	HGNC	ENSG00000157404	tier1	-	-	60	0	0.00	37	4	9.76
KLHL34	0	genome.wustl.edu	37	X	21674920	21674922	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	X	21674920	21674922	CTC	0	DEL	KLHL34	ENST00000379499	human	ensembl	74_37	-1	known	in_frame_del	c.987_985	p.E329in_frame_del	0.870:0.875:0.865	smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL34	HGNC	ENSG00000185915				12	0	0.00	4	2	33.33
KRTAP2-3	0	genome.wustl.edu	37	17	39216158	39216158	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	39216158	39216158	G	A	SNP	KRTAP2-3	ENST00000391418	human	ensembl	74_37	-1	known	missense	c.145	p.R49C	0.997	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP2-3	HGNC	ENSG00000212724	tier1	-	-	62	0	0.00	36	9	20.00
LARS	0	genome.wustl.edu	37	5	145508678	145508678	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	5	145508678	145508678	C	G	SNP	LARS	ENST00000394434	human	ensembl	74_37	-1	known	missense	c.2632	p.D878H	0.041	pfam_V/L/I-tRNA-synth_anticodon-bd,superfamily_tRNAsynth_1a_anticodon-bd,tigrfam_Leu-tRNA-synth_Ia_arc/euk	pfam_aa-tRNA-synth_Ia,pfam_Methionyl/Leucyl_tRNA_Synth,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Cys-tRNA/MSH_ligase,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Val/Leu/Ile-tRNA-synth_edit,tigrfam_Leu-tRNA-synth_Ia_arc/euk	-	no_errors	LARS	HGNC	ENSG00000133706				109	0	0.00	48	3	5.88
LINC00577	0	genome.wustl.edu	37	6	105388266	105388266	+	RNA	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	105388266	105388266	A	G	SNP	LINC00577	ENST00000369123	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00577	HGNC	ENSG00000203809	tier1	-	-	35	0	0.00	27	4	12.90
LINC00937	0	genome.wustl.edu	37	12	8543176	8543176	+	RNA	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	8543176	8543176	G	T	SNP	LINC00937	ENST00000420040	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	LINC00937	HGNC	ENSG00000226091				14	0	0.00	5	4	44.44
LINC01010	0	genome.wustl.edu	37	6	134758988	134758988	+	RNA	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	134758988	134758988	A	G	SNP	LINC01010	ENST00000431422	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	LINC01010	HGNC	ENSG00000236700	tier1	-	-	52	0	0.00	39	12	23.53
LMBR1L	0	genome.wustl.edu	37	12	49504487	49504488	+	RNA	INS	-	-	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	49504487	49504488	-	A	INS	LMBR1L	ENST00000548983	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	LMBR1L	HGNC	ENSG00000139636	tier1			26	0	0.00	8	5	38.46
LMOD1	0	genome.wustl.edu	37	1	201869875	201869875	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	201869875	201869875	C	T	SNP	LMOD1	ENST00000367288	human	ensembl	74_37	-1	known	missense	c.266	p.S89N	1.000	NULL	pfam_Tropomodulin,pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	LMOD1	HGNC	ENSG00000163431	tier1	-	-	51	0	0.00	50	4	7.41
LOC100128164	0	genome.wustl.edu	37	3	169663070	169663070	+	RNA	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	169663070	169663070	A	G	SNP	LOC100128164	ENST00000483289	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.047	-	-	-	no_errors	RP11-379K17.4	Clone_based_vega_gene	ENSG00000239219	tier1	-	-	25	0	0.00	14	5	26.32
LOC100508046	0	genome.wustl.edu	37	14	20010412	20010412	+	RNA	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	14	20010412	20010412	G	A	SNP	LOC100508046	ENST00000547584	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.046	-	-	-	no_errors	RP11-244H18.1	Clone_based_vega_gene	ENSG00000258276	tier1	rs200791687	-	25	0	0.00	13	6	31.58
LOC100508046	0	genome.wustl.edu	37	14	20010484	20010484	+	RNA	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	14	20010484	20010484	A	G	SNP	LOC100508046	ENST00000547584	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.325	-	-	-	no_errors	RP11-244H18.1	Clone_based_vega_gene	ENSG00000258276	tier1	rs201730464	-	17	0	0.00	7	5	41.67
LOC101927343	0	genome.wustl.edu	37	8	104178455	104178455	+	RNA	SNP	T	T	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	104178455	104178455	T	G	SNP	LOC101927343	ENST00000499522	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-318M2.2	Clone_based_vega_gene	ENSG00000247081	tier1	-	-	84	0	0.00	33	19	36.54
LPA	0	genome.wustl.edu	37	6	161007564	161007564	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	161007564	161007564	G	A	SNP	LPA	ENST00000316300	human	ensembl	74_37	-1	known	missense	c.4046	p.T1349M	0.337	pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pfam_Kringle,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	LPA	HGNC	ENSG00000198670	tier1	rs201200716	-	90	0	0.00	49	29	37.18
LRCH1	0	genome.wustl.edu	37	13	47263314	47263314	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	13	47263314	47263314	C	T	SNP	LRCH1	ENST00000389798	human	ensembl	74_37	+1	known	nonsense	c.997	p.R333*	1.000	NULL	pfam_Leu-rich_rpt,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_Leu-rich_rpt_typical-subtyp,smart_CH-domain,pfscan_CH-domain	-	no_errors	LRCH1	HGNC	ENSG00000136141	tier1	-	-	84	0	0.00	53	4	7.02
LRRC28	0	genome.wustl.edu	37	15	99892671	99892671	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	15	99892671	99892671	C	T	SNP	LRRC28	ENST00000301981	human	ensembl	74_37	+1	known	silent	c.690	p.C230	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC28	HGNC	ENSG00000168904	tier1	rs144217679	-	61	0	0.00	53	4	7.02
LRRK1	0	genome.wustl.edu	37	15	101608956	101608956	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	15	101608956	101608956	C	T	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	missense	c.5951	p.A1984V	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237	tier1	-	-	61	0	0.00	37	4	9.76
LRTM1	0	genome.wustl.edu	37	3	54958682	54958682	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	54958682	54958682	C	T	SNP	LRTM1	ENST00000273286	human	ensembl	74_37	-1	known	missense	c.568	p.G190S	0.943	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRTM1	HGNC	ENSG00000144771	tier1	-	-	44	0	0.00	12	12	50.00
MAGEB5	0	genome.wustl.edu	37	X	26235705	26235705	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	X	26235705	26235705	A	C	SNP	MAGEB5	ENST00000379029	human	ensembl	74_37	+1	known	missense	c.287	p.D96A	0.000	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEB5	HGNC	ENSG00000188408	tier1	-	-	25	0	0.00	1	5	83.33
MAML3	0	genome.wustl.edu	37	4	140811081	140811081	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	4	140811081	140811081	C	T	SNP	MAML3	ENST00000509479	human	ensembl	74_37	-1	known	silent	c.1509	p.Q503	1.000	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML3	HGNC	ENSG00000196782				63	0	0.00	29	3	9.38
MAP3K4	0	genome.wustl.edu	37	6	161470619	161470619	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	161470619	161470619	G	T	SNP	MAP3K4	ENST00000392142	human	ensembl	74_37	+1	known	nonsense	c.1315	p.E439*	0.945	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K4	HGNC	ENSG00000085511				50	0	0.00	44	3	6.38
MAP7D1	0	genome.wustl.edu	37	1	36639028	36639028	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	36639028	36639028	C	T	SNP	MAP7D1	ENST00000373151	human	ensembl	74_37	+1	known	missense	c.688	p.R230C	1.000	NULL	pfam_MAP7	-	no_errors	MAP7D1	HGNC	ENSG00000116871	tier1	rs201457297	-	97	0	0.00	42	13	23.64
MAPKBP1	0	genome.wustl.edu	37	15	42116219	42116219	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	15	42116219	42116219	G	T	SNP	MAPKBP1	ENST00000456763	human	ensembl	74_37	+1	known	missense	c.4191	p.M1397I	0.998	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MAPKBP1	HGNC	ENSG00000137802	tier1	-	-	84	0	0.00	50	4	7.41
MBL1P	0	genome.wustl.edu	37	10	81664758	81664758	+	RNA	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	10	81664758	81664758	G	A	SNP	MBL1P	ENST00000453174	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.261	-	-	-	no_errors	MBL1P	HGNC	ENSG00000242600	tier1	-	-	56	0	0.00	20	10	33.33
MDC1	0	genome.wustl.edu	37	6	30680055	30680055	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	30680055	30680055	G	A	SNP	MDC1	ENST00000376406	human	ensembl	74_37	-1	known	missense	c.1664	p.A555V	0.002	NULL	pfam_FHA_dom,superfamily_BRCT_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_BRCT_dom,pfscan_FHA_dom	-	no_errors	MDC1	HGNC	ENSG00000137337	tier1	-	-	32	0	0.00	29	9	23.68
MED13	0	genome.wustl.edu	37	17	60061649	60061649	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	60061649	60061649	G	C	SNP	MED13	ENST00000397786	human	ensembl	74_37	-1	known	missense	c.2771	p.P924R	1.000	NULL	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13	HGNC	ENSG00000108510				80	0	0.00	66	4	5.56
MEP1A	0	genome.wustl.edu	37	6	46766383	46766383	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	46766383	46766383	G	T	SNP	MEP1A	ENST00000230588	human	ensembl	74_37	+1	known	missense	c.186	p.Q62H	0.235	pirsf_Pept_M12A_Meprin	pirsf_Pept_M12A_Meprin,pfam_Peptidase_M12A,pfam_MATH,pfam_MAM_dom,pfam_EG-like_dom,superfamily_TRAF-like,superfamily_ConA-like_lec_gl_sf,smart_Peptidase_Metallo,smart_MAM_dom,smart_MATH,prints_Peptidase_M12A,prints_MAM_dom,pfscan_EG-like_dom,pfscan_MATH,pfscan_MAM_dom	-	no_errors	MEP1A	HGNC	ENSG00000112818	tier1	-	-	42	0	0.00	52	4	7.14
MKS1	0	genome.wustl.edu	37	17	56283514	56283514	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	56283514	56283514	G	A	SNP	MKS1	ENST00000393119	human	ensembl	74_37	-1	known	missense	c.1606	p.R536W	1.000	NULL	pfam_B9_dom	-	no_errors	MKS1	HGNC	ENSG00000011143				73	0	0.00	45	3	6.25
MMP25	0	genome.wustl.edu	37	16	3100009	3100009	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	3100009	3100009	G	T	SNP	MMP25	ENST00000336577	human	ensembl	74_37	+1	known	splice_site	c.233-1	e3-1	1.000	-	-	-	no_errors	MMP25	HGNC	ENSG00000008516				95	0	0.00	51	4	7.27
MST1L	0	genome.wustl.edu	37	1	17083605	17083605	+	RNA	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	17083605	17083605	A	G	SNP	MST1L	ENST00000455405	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MST1L	HGNC	ENSG00000186715	tier1	-	-	81	0	0.00	20	8	28.57
MTTP	0	genome.wustl.edu	37	4	100534196	100534196	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	4	100534196	100534196	T	C	SNP	MTTP	ENST00000265517	human	ensembl	74_37	+1	known	missense	c.2116	p.F706L	0.999	NULL	pfam_Lipid_transpt_N,superfamily_Vitellinogen_superhlx,superfamily_Lipid_transp_b-sht_shell,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	MTTP	HGNC	ENSG00000138823	tier1	-	-	68	0	0.00	46	5	9.80
MUM1	0	genome.wustl.edu	37	19	1370705	1370705	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	1370705	1370705	G	C	SNP	MUM1	ENST00000344663	human	ensembl	74_37	+1	known	missense	c.1617	p.K539N	0.000	NULL	pfam_PWWP_dom	-	no_errors	MUM1	HGNC	ENSG00000160953	tier1	-	-	83	0	0.00	61	4	6.15
MUT	0	genome.wustl.edu	37	6	49425613	49425613	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	49425613	49425613	T	A	SNP	MUT	ENST00000274813	human	ensembl	74_37	-1	known	missense	c.544	p.M182L	1.000	pfam_MeMalonylCoA_mutase_a/b_cat,superfamily_Cbl-dep_enz_cat,tigrfam_MMCoA_mutase_a_cat	pfam_MeMalonylCoA_mutase_a/b_cat,pfam_Cobalamin-bd,superfamily_Cbl-dep_enz_cat,superfamily_Cobalamin-bd,tigrfam_MMCoA_mutase_a_cat,tigrfam_Acid_CoA_mut_C	-	no_errors	MUT	HGNC	ENSG00000146085				34	0	0.00	37	3	7.50
MYCT1	0	genome.wustl.edu	37	6	153042973	153042973	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	153042973	153042973	G	A	SNP	MYCT1	ENST00000367245	human	ensembl	74_37	+1	known	missense	c.293	p.R98K	1.000	NULL	NULL	-	no_errors	MYCT1	HGNC	ENSG00000120279	tier1	-	-	46	0	0.00	29	6	17.14
N6AMT2	0	genome.wustl.edu	37	13	21306195	21306195	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	13	21306195	21306195	G	T	SNP	N6AMT2	ENST00000382754	human	ensembl	74_37	-1	known	nonsense	c.293	p.S98*	0.040	pfam_N6_adenine_Mtase-rel_euk	pfam_N6_adenine_Mtase-rel_euk	-	no_errors	N6AMT2	HGNC	ENSG00000150456				49	0	0.00	27	2	6.90
NCKAP1	0	genome.wustl.edu	37	2	183843562	183843562	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	183843562	183843562	C	T	SNP	NCKAP1	ENST00000360982	human	ensembl	74_37	-1	known	missense	c.1441	p.V481I	1.000	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1	-	no_errors	NCKAP1	HGNC	ENSG00000061676	tier1	-	-	58	0	0.00	61	6	8.96
NCOA2	0	genome.wustl.edu	37	8	71053566	71053566	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	71053566	71053566	C	G	SNP	NCOA2	ENST00000452400	human	ensembl	74_37	-1	known	missense	c.2881	p.V961L	1.000	pirsf_Nuclear_rcpt_coactivator	pfam_DUF1518,pfam_SRC-1,pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA2	HGNC	ENSG00000140396	tier1	-	-	45	0	0.00	28	25	47.17
NDE1	0	genome.wustl.edu	37	16	15758647	15758647	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	15758647	15758647	C	T	SNP	NDE1	ENST00000396353	human	ensembl	74_37	+1	known	silent	c.12	p.S4	0.237	NULL	pfam_NUDE_C	-	no_errors	NDE1	HGNC	ENSG00000072864	tier1	-	-	35	0	0.00	16	9	36.00
NEB	0	genome.wustl.edu	37	2	152521956	152521956	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	152521956	152521956	A	C	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.5129	p.I1710S	1.000	smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091	tier1	-	-	81	0	0.00	44	32	42.11
NECAP1	0	genome.wustl.edu	37	12	8248680	8248680	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	8248680	8248680	G	T	SNP	NECAP1	ENST00000339754	human	ensembl	74_37	+1	known	missense	c.822	p.Q274H	1.000	NULL	pfam_NECAP-1	-	no_errors	NECAP1	HGNC	ENSG00000089818	tier1	-	-	56	0	0.00	23	4	14.81
NFIC	0	genome.wustl.edu	37	19	3381984	3381984	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	3381984	3381984	C	T	SNP	NFIC	ENST00000443272	human	ensembl	74_37	+1	known	missense	c.305	p.P102L	0.998	pfam_MAD_homology1_Dwarfin-type,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIC	HGNC	ENSG00000141905	tier1	-	-	96	0	0.00	31	35	53.03
NLGN4Y	0	genome.wustl.edu	37	Y	16953045	16953045	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	Y	16953045	16953045	C	A	SNP	NLGN4Y	ENST00000382868	human	ensembl	74_37	+1	known	missense	c.2525	p.T842K	1.000	NULL	pfam_CarbesteraseB,prints_Neuroligin	-	no_errors	NLGN4Y	HGNC	ENSG00000165246	tier1	-	-	61	0	0.00	13	3	18.75
NOX4	0	genome.wustl.edu	37	11	89075351	89075351	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	89075351	89075351	C	T	SNP	NOX4	ENST00000413594	human	ensembl	74_37	-1	known	missense	c.1291	p.D431N	1.000	pfam_FAD-bd_8,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	pfam_Fe_red_NAD-bd_6,pfam_Fe3_Rdtase_TM_dom,pfam_FAD-bd_8,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	NOX4	HGNC	ENSG00000086991	tier1	-	-	86	0	0.00	59	7	10.61
NPC1L1	0	genome.wustl.edu	37	7	44555474	44555474	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	44555474	44555474	G	T	SNP	NPC1L1	ENST00000289547	human	ensembl	74_37	-1	known	missense	c.3805	p.L1269I	1.000	pfam_Patched	pfam_Patched,pfscan_SSD	-	no_errors	NPC1L1	HGNC	ENSG00000015520	tier1	-	-	36	0	0.00	47	4	7.84
NPEPL1	0	genome.wustl.edu	37	20	57282220	57282220	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	20	57282220	57282220	G	A	SNP	NPEPL1	ENST00000356091	human	ensembl	74_37	+1	known	silent	c.864	p.A288	0.914	pfam_Peptidase_M17_C,prints_Leucine_aapep/pepB	pfam_Peptidase_M17_C,prints_Leucine_aapep/pepB	-	no_errors	NPEPL1	HGNC	ENSG00000215440	tier1	-	-	185	0	0.00	181	42	18.83
NSUN5P1	0	genome.wustl.edu	37	7	75045369	75045369	+	RNA	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	75045369	75045369	C	T	SNP	NSUN5P1	ENST00000393633	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NSUN5P1	HGNC	ENSG00000223705				83	0	0.00	51	3	5.56
NUP98	0	genome.wustl.edu	37	11	3720357	3720357	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	3720357	3720357	T	C	SNP	NUP98	ENST00000324932	human	ensembl	74_37	-1	known	missense	c.3964	p.T1322A	1.000	pfam_Nup96	pfam_Nup96,pfam_Peptidase_S59,superfamily_Peptidase_S59	-	no_errors	NUP98	HGNC	ENSG00000110713	tier1	-	-	67	0	0.00	37	20	35.09
NVL	0	genome.wustl.edu	37	1	224514159	224514160	+	Frame_Shift_Ins	INS	-	-	TA			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	224514159	224514160	-	TA	INS	NVL	ENST00000281701	human	ensembl	74_37	-1	known	frame_shift_ins	c.65_64	p.T22fs	0.935:0.900	NULL	pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_ATPase_AAA-2,pfam_ATPase_dyneun-rel_AAA,pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	NVL	HGNC	ENSG00000143748	tier1			55	0	0.00	67	9	11.84
NXPE1	0	genome.wustl.edu	37	11	114392979	114392979	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	114392979	114392979	C	T	SNP	NXPE1	ENST00000424269	human	ensembl	74_37	-1	known	missense	c.1355	p.R452H	0.955	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE1	HGNC	ENSG00000095110				69	0	0.00	47	3	6.00
OGFOD3	0	genome.wustl.edu	37	17	80373480	80373480	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	80373480	80373480	C	T	SNP	OGFOD3	ENST00000329197	human	ensembl	74_37	-1	known	missense	c.98	p.R33Q	0.001	NULL	smart_Pro_4_hyd_alph	-	no_errors	OGFOD3	HGNC	ENSG00000181396				106	0	0.00	76	4	5.00
OR10Q1	0	genome.wustl.edu	37	11	57996159	57996159	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	57996159	57996159	C	T	SNP	OR10Q1	ENST00000316770	human	ensembl	74_37	-1	known	missense	c.189	p.M63I	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10Q1	HGNC	ENSG00000180475				34	0	0.00	18	4	18.18
OR4C3	0	genome.wustl.edu	37	11	48346874	48346874	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	48346874	48346874	G	T	SNP	OR4C3	ENST00000319856	human	ensembl	74_37	+1	known	nonsense	c.382	p.G128*	0.927	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C3	HGNC	ENSG00000176547	tier1	-	-	108	0	0.00	65	17	20.73
OR51E1	0	genome.wustl.edu	37	11	4673819	4673819	+	Silent	SNP	T	T	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	4673819	4673819	T	A	SNP	OR51E1	ENST00000396952	human	ensembl	74_37	+1	known	silent	c.63	p.P21	0.996	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51E1	HGNC	ENSG00000180785	tier1	-	-	59	0	0.00	46	8	14.81
OR5AS1	0	genome.wustl.edu	37	11	55798703	55798703	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	55798703	55798703	C	G	SNP	OR5AS1	ENST00000313555	human	ensembl	74_37	+1	known	missense	c.809	p.T270S	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5AS1	HGNC	ENSG00000181785				57	0	0.00	33	2	5.71
OR5T1	0	genome.wustl.edu	37	11	56043714	56043714	+	Silent	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	56043714	56043714	T	C	SNP	OR5T1	ENST00000313033	human	ensembl	74_37	+1	known	silent	c.600	p.S200	0.004	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5T1	HGNC	ENSG00000181698	tier1	-	-	70	0	0.00	31	12	27.91
ORC4	0	genome.wustl.edu	37	2	148731063	148731063	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	148731063	148731063	G	T	SNP	ORC4	ENST00000264169	human	ensembl	74_37	-1	known	missense	c.88	p.R30S	1.000	superfamily_P-loop_NTPase,pirsf_ORC4	pfam_ATPase_AAA_core,pfam_ATPase_dom_prok,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pirsf_ORC4	-	no_errors	ORC4	HGNC	ENSG00000115947				67	0	0.00	44	3	6.38
OTUB1	0	genome.wustl.edu	37	11	63764925	63764925	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	63764925	63764925	C	T	SNP	OTUB1	ENST00000422031	human	ensembl	74_37	+1	known	silent	c.834	p.G278	0.998	pfam_Peptidase_C65_otubain,pfam_OTU,pirsf_Ubiquitin_thioesterase_Otubain,pfscan_OTU	pfam_Peptidase_C65_otubain,pfam_OTU,pirsf_Ubiquitin_thioesterase_Otubain,pfscan_OTU	-	no_errors	OTUB1	HGNC	ENSG00000167770	tier1	-	-	40	0	0.00	21	4	16.00
PAH	0	genome.wustl.edu	37	12	103245493	103245493	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	103245493	103245493	G	A	SNP	PAH	ENST00000553106	human	ensembl	74_37	-1	known	missense	c.884	p.S295L	1.000	pfam_Aromatic-AA_hydroxylase_C,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,tigrfam_Phe-4-hydroxylase_tetra	pfam_Aromatic-AA_hydroxylase_C,pfam_ACT_dom,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,prints_Aromatic-AA_hydroxylase_C,tigrfam_Phe-4-hydroxylase_tetra	-	no_errors	PAH	HGNC	ENSG00000171759				59	0	0.00	37	2	5.13
PAN3	0	genome.wustl.edu	37	13	28712978	28712979	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	13	28712978	28712979	GA	-	DEL	PAN3	ENST00000380958	human	ensembl	74_37	+1	known	frame_shift_del	c.184_185	p.E62fs	1.000:1.000	smart_Znf_CCCH	superfamily_Kinase-like_dom,smart_Znf_CCCH,pfscan_Prot_kinase_dom	-	no_errors	PAN3	HGNC	ENSG00000152520	tier1			81	0	0.00	34	18	34.62
PBX2P1	0	genome.wustl.edu	37	3	142896901	142896901	+	RNA	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	142896901	142896901	G	T	SNP	PBX2P1	ENST00000560287	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.991	-	-	-	no_errors	PBX2P1	HGNC	ENSG00000244171	tier1	-	-	122	0	0.00	45	17	27.42
PCDH17	0	genome.wustl.edu	37	13	58208354	58208354	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	13	58208354	58208354	G	A	SNP	PCDH17	ENST00000377918	human	ensembl	74_37	+1	known	silent	c.1674	p.G558	0.991	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH17	HGNC	ENSG00000118946	tier1	-	-	40	0	0.00	9	6	40.00
PCDHA12	0	genome.wustl.edu	37	5	140255418	140255418	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	5	140255418	140255418	G	A	SNP	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	missense	c.361	p.V121M	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664	tier1	-	-	133	0	0.00	73	7	8.75
PEG3	0	genome.wustl.edu	37	19	57335020	57335020	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	57335020	57335020	T	A	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	missense	c.422	p.D141V	0.211	smart_Tscrpt_reg_SCAN	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300	tier1	-	-	71	0	0.00	14	26	65.00
PFN4	0	genome.wustl.edu	37	2	24342500	24342500	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	24342500	24342500	G	T	SNP	PFN4	ENST00000313213	human	ensembl	74_37	-1	known	missense	c.308	p.T103N	0.996	pfam_Profilin_eukaryotes/bac,superfamily_Profilin_eukaryotes/bac,smart_Profilin_eukaryotes/bac,prints_Profilin_eukaryotes/bac	pfam_Profilin_eukaryotes/bac,superfamily_Profilin_eukaryotes/bac,smart_Profilin_eukaryotes/bac,prints_Profilin_eukaryotes/bac	-	no_errors	PFN4	HGNC	ENSG00000176732	tier1	-	-	65	0	0.00	26	21	44.68
PHYHIPL	0	genome.wustl.edu	37	10	61005214	61005214	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	10	61005214	61005214	G	T	SNP	PHYHIPL	ENST00000373880	human	ensembl	74_37	+1	known	missense	c.994	p.V332F	1.000	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	PHYHIPL	HGNC	ENSG00000165443	tier1	-	-	24	0	0.00	21	5	19.23
PIGZ	0	genome.wustl.edu	37	3	196675122	196675122	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	196675122	196675122	G	T	SNP	PIGZ	ENST00000412723	human	ensembl	74_37	-1	known	missense	c.646	p.L216I	0.989	pfam_GPI_mannosylTrfase	pfam_GPI_mannosylTrfase	-	no_errors	PIGZ	HGNC	ENSG00000119227				65	0	0.00	29	2	6.45
PIK3CA	0	genome.wustl.edu	37	3	178916924	178916924	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	178916924	178916924	C	T	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.311	p.P104L	1.000	pfam_PI3K_adapt-bd_dom,smart_PI3K_adapt-bd_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879				45	0	0.00	32	2	5.88
PKHD1L1	0	genome.wustl.edu	37	8	110477200	110477200	+	Silent	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	110477200	110477200	T	C	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	silent	c.8139	p.L2713	0.997	NULL	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038				70	0	0.00	46	4	8.00
PLIN2	0	genome.wustl.edu	37	9	19123637	19123637	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	19123637	19123637	C	T	SNP	PLIN2	ENST00000276914	human	ensembl	74_37	-1	known	missense	c.235	p.A79T	1.000	pfam_Perilipin,pirsf_Perilipin	pfam_Perilipin,pirsf_Perilipin	-	no_errors	PLIN2	HGNC	ENSG00000147872				51	0	0.00	46	4	8.00
PMS2	0	genome.wustl.edu	37	7	6026831	6026831	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	6026831	6026831	C	T	SNP	PMS2	ENST00000265849	human	ensembl	74_37	-1	known	missense	c.1565	p.S522N	0.174	NULL	pfam_MutL_C,pfam_DNA_mismatch_repair_C,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_MutL_C,tigrfam_DNA_mismatch_repair_N	-	no_errors	PMS2	HGNC	ENSG00000122512				79	0	0.00	62	4	6.06
PPP4R4	0	genome.wustl.edu	37	14	94725670	94725671	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	14	94725670	94725671	AG	-	DEL	PPP4R4	ENST00000304338	human	ensembl	74_37	+1	known	frame_shift_del	c.2091_2092	p.K699fs	1.000:1.000	NULL	superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP4R4	HGNC	ENSG00000119698	tier1			48	0	0.00	36	2	5.26
PRDM8	0	genome.wustl.edu	37	4	81123235	81123235	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	4	81123235	81123235	G	A	SNP	PRDM8	ENST00000339711	human	ensembl	74_37	+1	known	missense	c.619	p.G207S	0.876	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PRDM8	HGNC	ENSG00000152784	tier1	-	-	81	0	0.00	34	18	34.62
PREX2	0	genome.wustl.edu	37	8	68968135	68968135	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	68968135	68968135	G	A	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	missense	c.1164	p.M388I	1.000	NULL	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889	tier1	-	-	58	0	0.00	57	14	19.72
PREX2	0	genome.wustl.edu	37	8	69017554	69017554	+	RNA	SNP	T	T	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	69017554	69017554	T	A	SNP	PREX2	ENST00000529398	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	PREX2	HGNC	ENSG00000046889	tier1	-	-	36	0	0.00	48	10	17.24
PRMT1	0	genome.wustl.edu	37	19	50180545	50180545	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	50180545	50180545	C	T	SNP	PRMT1	ENST00000454376	human	ensembl	74_37	+1	known	missense	c.8	p.A3V	1.000	NULL	pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Arg_MeTrfase,pfam_Methyltransf_11,pfam_Small_mtfrase_dom,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	PRMT1	HGNC	ENSG00000126457	tier1	-	-	205	0	0.00	187	11	5.53
PRNP	0	genome.wustl.edu	37	20	4680395	4680395	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	20	4680395	4680395	C	T	SNP	PRNP	ENST00000379440	human	ensembl	74_37	+1	known	missense	c.529	p.H177Y	0.995	pfam_Prion/Doppel_prot_b-ribbon_dom,superfamily_Prion/Doppel_prot_b-ribbon_dom,smart_Prion	pfam_Prion/Doppel_prot_b-ribbon_dom,pfam_Prion_N_dom,superfamily_Prion/Doppel_prot_b-ribbon_dom,smart_Prion,prints_Prion	-	no_errors	PRNP	HGNC	ENSG00000171867	tier1	-	-	54	0	0.00	42	4	8.70
PRPF8	0	genome.wustl.edu	37	17	1586912	1586912	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	1586912	1586912	G	A	SNP	PRPF8	ENST00000304992	human	ensembl	74_37	-1	known	missense	c.184	p.P62S	1.000	pfam_PRO8NT	pfam_PROCN,pfam_PRP8_domainIV,pfam_Prp8_U6-snRNA-bd,pfam_PRO8NT,pfam_Prp8_U5-snRNA-bd,pfam_PROCT,pfam_RRM_spliceosomal_PrP8,pfam_JAB_MPN_dom,superfamily_Cupredoxin,superfamily_Histone-fold,smart_JAB_MPN_dom	-	no_errors	PRPF8	HGNC	ENSG00000174231	tier1	-	-	90	0	0.00	52	4	7.14
PRR3	0	genome.wustl.edu	37	6	30531428	30531428	+	RNA	DEL	T	T	-			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	30531428	30531428	T	-	DEL	PRR3	ENST00000481741	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	PRR3	HGNC	ENSG00000204576	tier1			34	0	0.00	26	5	16.13
PRRC2C	0	genome.wustl.edu	37	1	171492410	171492410	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	171492410	171492410	G	A	SNP	PRRC2C	ENST00000392078	human	ensembl	74_37	+1	known	missense	c.884	p.R295H	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2C	HGNC	ENSG00000117523	tier1	-	-	49	0	0.00	37	9	19.57
PSORS1C1	0	genome.wustl.edu	37	6	31106527	31106527	+	Silent	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	31106527	31106527	T	C	SNP	PSORS1C1	ENST00000259881	human	ensembl	74_37	+1	known	silent	c.138	p.L46	0.000	NULL	NULL	-	no_errors	PSORS1C1	HGNC	ENSG00000204540	tier1	-	-	79	0	0.00	54	4	6.90
PTPN4	0	genome.wustl.edu	37	2	120714494	120714494	+	Nonsense_Mutation	SNP	C	C	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	120714494	120714494	C	G	SNP	PTPN4	ENST00000263708	human	ensembl	74_37	+1	known	nonsense	c.2055	p.Y685*	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pirsf_Tyr_Pase_non-rcpt_typ-3/4,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,pfam_PDZ,pfam_FERM-adjacent,superfamily_FERM_central,superfamily_PDZ,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-3/4,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	PTPN4	HGNC	ENSG00000088179	tier1	-	-	131	0	0.00	95	5	5.00
PUM1	0	genome.wustl.edu	37	1	31438993	31438993	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	31438993	31438993	G	A	SNP	PUM1	ENST00000426105	human	ensembl	74_37	-1	known	missense	c.1922	p.A641V	1.000	NULL	pfam_Pumilio_RNA-bd_rpt,superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	-	no_errors	PUM1	HGNC	ENSG00000134644	tier1	-	-	122	0	0.00	65	19	22.62
RALA	0	genome.wustl.edu	37	7	39730055	39730055	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	39730055	39730055	G	T	SNP	RALA	ENST00000005257	human	ensembl	74_37	+1	known	missense	c.189	p.Q63H	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RALA	HGNC	ENSG00000006451				51	0	0.00	51	3	5.56
RBM6	0	genome.wustl.edu	37	3	50004793	50004794	+	RNA	INS	-	-	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	50004793	50004794	-	A	INS	RBM6	ENST00000488807	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	RBM6	HGNC	ENSG00000004534	tier1			17	0	0.00	9	3	25.00
RDX	0	genome.wustl.edu	37	11	110143263	110143263	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	110143263	110143263	G	T	SNP	RDX	ENST00000530749	human	ensembl	74_37	-1	known	missense	c.94	p.Q32K	1.000	pirsf_ERM,pfam_FERM_N,smart_Band_41_domain,prints_Ez/rad/moesin_like,pfscan_FERM_domain	pirsf_ERM,pfam_ERM_C_dom,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,superfamily_Moesin_tail,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Band_41_domain,prints_Ez/rad/moesin_like,prints_Band_41_fam,pfscan_FERM_domain	-	no_errors	RDX	HGNC	ENSG00000137710	tier1	-	-	45	0	0.00	36	4	10.00
RECQL	0	genome.wustl.edu	37	12	21636458	21636458	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	21636458	21636458	T	G	SNP	RECQL	ENST00000421138	human	ensembl	74_37	-1	known	missense	c.552	p.L184F	0.995	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd,tigrfam_DNA_helicase_ATP-dep_RecQ	pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_RQC_domain,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	RECQL	HGNC	ENSG00000004700	tier1	-	-	78	0	0.00	53	8	13.11
REV3L	0	genome.wustl.edu	37	6	111688631	111688631	+	Silent	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	111688631	111688631	A	G	SNP	REV3L	ENST00000358835	human	ensembl	74_37	-1	known	silent	c.6360	p.P2120	0.997	superfamily_RNaseH-like_dom	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B	-	no_errors	REV3L	HGNC	ENSG00000009413	tier1	-	-	84	0	0.00	51	4	7.14
RFXAP	0	genome.wustl.edu	37	13	37401814	37401814	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	13	37401814	37401814	T	C	SNP	RFXAP	ENST00000255476	human	ensembl	74_37	+1	known	missense	c.743	p.L248S	1.000	NULL	NULL	-	no_errors	RFXAP	HGNC	ENSG00000133111	tier1	-	-	141	0	0.00	66	39	37.14
RIMBP2	0	genome.wustl.edu	37	12	130926745	130926745	+	Silent	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	130926745	130926745	G	T	SNP	RIMBP2	ENST00000261655	human	ensembl	74_37	-1	known	silent	c.1101	p.S367	0.854	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709				37	0	0.00	26	2	7.14
RMDN2	0	genome.wustl.edu	37	2	38216731	38216731	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	38216731	38216731	A	C	SNP	RMDN2	ENST00000234195	human	ensembl	74_37	+1	known	missense	c.1373	p.N458T	1.000	NULL	NULL	-	no_errors	RMDN2	HGNC	ENSG00000115841	tier1	-	-	99	0	0.00	99	11	10.00
RNF169	0	genome.wustl.edu	37	11	74500713	74500713	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	74500713	74500713	A	G	SNP	RNF169	ENST00000299563	human	ensembl	74_37	+1	known	missense	c.545	p.E182G	1.000	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF169	HGNC	ENSG00000166439	tier1	-	-	46	0	0.00	30	16	34.78
RNPC3	0	genome.wustl.edu	37	1	104076467	104076467	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	104076467	104076467	A	-	DEL	RNPC3	ENST00000423855	human	ensembl	74_37	+1	known	frame_shift_del	c.347	p.K119fs	0.784	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RNPC3	HGNC	ENSG00000185946	tier1			35	0	0.00	19	4	17.39
RPAP1	0	genome.wustl.edu	37	15	41829284	41829284	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	15	41829284	41829284	G	T	SNP	RPAP1	ENST00000304330	human	ensembl	74_37	-1	known	missense	c.40	p.L14M	1.000	NULL	pfam_RNA_pol_II_AP1_C,pfam_RNA_pol_II_AP1_N,superfamily_ARM-type_fold	-	no_errors	RPAP1	HGNC	ENSG00000103932	tier1	-	-	24	0	0.00	13	3	18.75
RPS6KA1	0	genome.wustl.edu	37	1	26898372	26898372	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	26898372	26898372	C	T	SNP	RPS6KA1	ENST00000531382	human	ensembl	74_37	+1	known	silent	c.1812	p.C604	0.948	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	RPS6KA1	HGNC	ENSG00000117676				37	0	0.00	27	2	6.67
RSRC1	0	genome.wustl.edu	37	3	158261202	158261202	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	158261202	158261202	G	T	SNP	RSRC1	ENST00000295930	human	ensembl	74_37	+1	known	nonsense	c.838	p.E280*	0.944	NULL	NULL	-	no_errors	RSRC1	HGNC	ENSG00000174891	tier1	-	-	49	0	0.00	30	4	11.76
SCN11A	0	genome.wustl.edu	37	3	38888876	38888876	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	38888876	38888876	C	T	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	missense	c.4685	p.R1562Q	0.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356				40	0	0.00	32	2	5.88
SCUBE1	0	genome.wustl.edu	37	22	43619183	43619183	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	22	43619183	43619183	C	A	SNP	SCUBE1	ENST00000360835	human	ensembl	74_37	-1	known	missense	c.1247	p.R416L	0.002	NULL	pfam_EGF-like_Ca-bd_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	SCUBE1	HGNC	ENSG00000159307	tier1	-	-	75	0	0.00	38	18	32.14
SCYL3	0	genome.wustl.edu	37	1	169823906	169823907	+	Frame_Shift_Ins	INS	-	-	GA			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	169823906	169823907	-	GA	INS	SCYL3	ENST00000367770	human	ensembl	74_37	-1	known	frame_shift_ins	c.1674_1673	p.Q559fs	0.004:0.312	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_HEAT_type_2,pfscan_Prot_kinase_dom	-	no_errors	SCYL3	HGNC	ENSG00000000457	tier1			56	0	0.00	54	8	12.90
SEMA4D	0	genome.wustl.edu	37	9	92002317	92002317	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	92002317	92002317	G	A	SNP	SEMA4D	ENST00000356444	human	ensembl	74_37	-1	known	silent	c.1314	p.V438	0.999	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,pfam_Immunoglobulin,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,smart_Ig_sub2,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA4D	HGNC	ENSG00000187764				67	0	0.00	44	3	6.38
SENP3	0	genome.wustl.edu	37	17	7475198	7475198	+	RNA	SNP	T	T	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	7475198	7475198	T	A	SNP	SENP3	ENST00000578813	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.939	-	-	-	no_errors	SENP3	HGNC	ENSG00000161956	tier1	-	-	37	0	0.00	14	5	26.32
SEPT1	0	genome.wustl.edu	37	16	30392561	30392561	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	30392561	30392561	G	A	SNP	SEPT1	ENST00000321367	human	ensembl	74_37	-1	known	missense	c.586	p.R196W	1.000	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT1	HGNC	ENSG00000180096	tier1	-	-	180	0	0.00	78	17	17.89
SEPT1	0	genome.wustl.edu	37	16	30393468	30393470	+	In_Frame_Del	DEL	TGA	TGA	-			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	TGA	TGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	30393468	30393470	TGA	-	DEL	SEPT1	ENST00000321367	human	ensembl	74_37	-1	known	in_frame_del	c.268_266	p.I89in_frame_del	1.000:1.000:1.000	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT1	HGNC	ENSG00000180096	tier1			57	0	0.00	36	7	16.28
SETD8	0	genome.wustl.edu	37	12	123875311	123875311	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	123875311	123875311	C	T	SNP	SETD8	ENST00000437519	human	ensembl	74_37	+1	known	missense	c.145	p.R49W	0.079	NULL	NULL	-	no_errors	SETD8	HGNC	ENSG00000183955	tier1	rs74356260	-	73	0	0.00	51	4	7.27
SIPA1L2	0	genome.wustl.edu	37	1	232581352	232581352	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	232581352	232581352	G	A	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	silent	c.3276	p.C1092	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991				74	0	0.00	70	4	5.41
SLA	0	genome.wustl.edu	37	8	134052331	134052331	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	134052331	134052331	T	C	SNP	SLA	ENST00000427060	human	ensembl	74_37	-1	known	missense	c.649	p.T217A	1.000	NULL	pfam_SH2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,pfscan_SH2,pfscan_SH3_domain,prints_SH2	-	no_errors	SLA	HGNC	ENSG00000155926	tier1	-	-	72	0	0.00	55	4	6.78
SLC12A5	0	genome.wustl.edu	37	20	44663608	44663608	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	20	44663608	44663608	G	T	SNP	SLC12A5	ENST00000454036	human	ensembl	74_37	+1	known	missense	c.143	p.S48I	1.000	prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A5	HGNC	ENSG00000124140	tier1	-	-	73	0	0.00	61	7	10.29
SLC12A6	0	genome.wustl.edu	37	15	34529714	34529714	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	15	34529714	34529714	G	T	SNP	SLC12A6	ENST00000558589	human	ensembl	74_37	-1	known	missense	c.2813	p.A938D	1.000	tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_K/Cl_cotranspt_1/3,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A6	HGNC	ENSG00000140199	tier1	-	-	96	0	0.00	59	4	6.35
SLC13A1	0	genome.wustl.edu	37	7	122787321	122787321	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	122787321	122787321	A	T	SNP	SLC13A1	ENST00000194130	human	ensembl	74_37	-1	known	missense	c.704	p.V235E	1.000	pfam_Na/sul_symport	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom	-	no_errors	SLC13A1	HGNC	ENSG00000081800	tier1	-	-	54	0	0.00	43	4	8.51
SLC13A4	0	genome.wustl.edu	37	7	135376332	135376332	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	135376332	135376332	G	C	SNP	SLC13A4	ENST00000354042	human	ensembl	74_37	-1	known	missense	c.1282	p.P428A	1.000	pfam_Na/sul_symport	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom,pfam_DctM	-	no_errors	SLC13A4	HGNC	ENSG00000164707	tier1	-	-	56	0	0.00	51	4	7.27
SLC22A2	0	genome.wustl.edu	37	6	160668305	160668306	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	160668305	160668306	0	C	INS	SLC22A2	ENST00000366953	human	ensembl	74_37	-1	known	frame_shift_ins	c.868_867	p.L289fs	1.000:1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A2	HGNC	ENSG00000112499				85	0	0.00	79	7	8.14
SLC25A10	0	genome.wustl.edu	37	17	79682740	79682740	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	79682740	79682740	G	A	SNP	SLC25A10	ENST00000541223	human	ensembl	74_37	+1	known	missense	c.811	p.V271M	0.970	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,pfam_Ribosomal_L7/L12_C,superfamily_Mt_carrier_dom,superfamily_Ribosomal_L7/L12_oligo,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_uncoupling	-	no_errors	SLC25A10	HGNC	ENSG00000183048	tier1	-	-	31	0	0.00	10	3	23.08
SLC25A23	0	genome.wustl.edu	37	19	6456040	6456040	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	6456040	6456040	T	-	DEL	SLC25A23	ENST00000264088	human	ensembl	74_37	-1	known	frame_shift_del	c.547	p.T183fs	0.003	NULL	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A23	HGNC	ENSG00000125648	tier1			32	0	0.00	19	2	9.52
SLC30A10	0	genome.wustl.edu	37	1	220091782	220091782	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	220091782	220091782	G	A	SNP	SLC30A10	ENST00000366926	human	ensembl	74_37	-1	known	missense	c.773	p.T258M	0.996	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A10	HGNC	ENSG00000196660				31	0	0.00	33	2	5.71
SLC44A2	0	genome.wustl.edu	37	19	10747424	10747424	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	10747424	10747424	G	A	SNP	SLC44A2	ENST00000335757	human	ensembl	74_37	+1	known	missense	c.1583	p.R528Q	1.000	pfam_Choline_transptr-like	pfam_Choline_transptr-like	-	no_errors	SLC44A2	HGNC	ENSG00000129353				36	0	0.00	37	3	7.50
SLC5A6	0	genome.wustl.edu	37	2	27427384	27427384	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	27427384	27427384	G	T	SNP	SLC5A6	ENST00000310574	human	ensembl	74_37	-1	known	missense	c.950	p.A317E	0.588	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A6	HGNC	ENSG00000138074				38	0	0.00	43	3	6.52
SLC6A19	0	genome.wustl.edu	37	5	1219077	1219077	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	5	1219077	1219077	G	A	SNP	SLC6A19	ENST00000304460	human	ensembl	74_37	+1	known	silent	c.1233	p.P411	0.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A19	HGNC	ENSG00000174358	tier1	-	-	36	0	0.00	38	4	9.30
SLCO3A1	0	genome.wustl.edu	37	15	92647683	92647683	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	15	92647683	92647683	G	A	SNP	SLCO3A1	ENST00000318445	human	ensembl	74_37	+1	known	missense	c.920	p.R307K	0.987	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO3A1	HGNC	ENSG00000176463				64	0	0.00	27	3	10.00
SNAP91	0	genome.wustl.edu	37	6	84366506	84366506	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	84366506	84366506	C	A	SNP	SNAP91	ENST00000369694	human	ensembl	74_37	-1	known	missense	c.625	p.A209S	1.000	pfam_ANTH_dom	pfam_ANTH_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	-	no_errors	SNAP91	HGNC	ENSG00000065609	tier1	-	-	40	0	0.00	21	6	22.22
SOGA2	0	genome.wustl.edu	37	18	8720379	8720379	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	18	8720379	8720379	C	T	SNP	SOGA2	ENST00000359865	human	ensembl	74_37	+1	known	missense	c.242	p.T81M	0.902	NULL	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502				50	0	0.00	26	3	10.34
SORBS1	0	genome.wustl.edu	37	10	97081740	97081740	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	10	97081740	97081740	C	T	SNP	SORBS1	ENST00000607232	human	ensembl	74_37	-1	known	silent	c.3684	p.R1228	1.000	superfamily_SH3_domain	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_p67phox,prints_SH3_domain	-	no_errors	SORBS1	HGNC	ENSG00000095637				80	0	0.00	64	4	5.80
SOX1	0	genome.wustl.edu	37	13	112722081	112722083	+	In_Frame_Del	DEL	GGC	GGC	-			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	GGC	GGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	13	112722081	112722083	GGC	-	DEL	SOX1	ENST00000330949	human	ensembl	74_37	+1	known	in_frame_del	c.109_111	p.G40in_frame_del	0.029:0.038:0.034	superfamily_HMG_box_dom	pfam_HMG_box_dom,pfam_TF_SOX,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX1	HGNC	ENSG00000182968	tier1			53	0	0.00	27	2	6.90
SPATA31A2	0	genome.wustl.edu	37	9	39888176	39888176	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	39888176	39888176	A	C	SNP	SPATA31A2	ENST00000456183	human	ensembl	74_37	+1	known	missense	c.1163	p.N388T	0.001	NULL	NULL	-	no_errors	SPATA31A2	HGNC	ENSG00000204848	tier1	-	-	218	0	0.00	117	45	27.78
SPATA31D1	0	genome.wustl.edu	37	9	84607460	84607460	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	84607460	84607460	G	A	SNP	SPATA31D1	ENST00000344803	human	ensembl	74_37	+1	known	missense	c.2075	p.R692Q	0.000	NULL	NULL	-	no_errors	SPATA31D1	HGNC	ENSG00000214929	tier1	-	-	195	0	0.00	107	11	9.32
SPDYE2B	0	genome.wustl.edu	37	7	102294074	102294074	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	102294074	102294074	T	C	SNP	SPDYE2B	ENST00000436228	human	ensembl	74_37	+1	known	missense	c.337	p.S113P	0.002	NULL	pfam_Cell_cycle_regulatory_Spy1	-	no_errors	SPDYE2B	HGNC	ENSG00000173678	tier1	-	-	17	0	0.00	8	3	27.27
SPEF1	0	genome.wustl.edu	37	20	3759184	3759184	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	20	3759184	3759184	G	A	SNP	SPEF1	ENST00000379756	human	ensembl	74_37	-1	known	missense	c.487	p.R163W	0.000	NULL	pfam_DUF1042,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_CH-domain	-	no_errors	SPEF1	HGNC	ENSG00000101222	tier1	-	-	59	0	0.00	43	4	8.51
SPTAN1	0	genome.wustl.edu	37	9	131370475	131370475	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	131370475	131370475	G	T	SNP	SPTAN1	ENST00000358161	human	ensembl	74_37	+1	known	nonsense	c.4411	p.E1471*	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_EF_hand_dom,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3,prints_SH3_domain	-	no_errors	SPTAN1	HGNC	ENSG00000197694				44	0	0.00	32	2	5.88
SPTB	0	genome.wustl.edu	37	14	65237816	65237816	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	14	65237816	65237816	A	G	SNP	SPTB	ENST00000389722	human	ensembl	74_37	-1	known	missense	c.5585	p.L1862P	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Pleckstrin_homology,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTB	HGNC	ENSG00000070182	tier1	-	-	39	0	0.00	15	8	34.78
SRGAP3	0	genome.wustl.edu	37	3	9100157	9100157	+	Splice_Site	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	9100157	9100157	C	T	SNP	SRGAP3	ENST00000383836	human	ensembl	74_37	-1	known	splice_site	c.802-1	e7-1	1.000	-	-	-	no_errors	SRGAP3	HGNC	ENSG00000196220	tier1	-	-	46	0	0.00	27	9	25.00
STX11	0	genome.wustl.edu	37	6	144508350	144508350	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	144508350	144508350	G	A	SNP	STX11	ENST00000367568	human	ensembl	74_37	+1	known	missense	c.586	p.D196N	1.000	superfamily_t-SNARE	pfam_T_SNARE_dom,pfam_Syntaxin_N,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX11	HGNC	ENSG00000135604				75	0	0.00	50	3	5.66
SUSD2	0	genome.wustl.edu	37	22	24584195	24584195	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	22	24584195	24584195	C	T	SNP	SUSD2	ENST00000358321	human	ensembl	74_37	+1	known	missense	c.2344	p.R782C	0.070	NULL	pfam_AMOP,pfam_VWF_type-D,pfam_Sushi_SCR_CCP,pfam_Somatomedin_B_dom,superfamily_Sushi_SCR_CCP,superfamily_Ig_E-set,smart_AMOP,smart_VWF_type-D,smart_Sushi_SCR_CCP,pfscan_AMOP,pfscan_Somatomedin_B_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SUSD2	HGNC	ENSG00000099994	tier1	-	-	38	0	0.00	33	12	26.67
SYNJ2	0	genome.wustl.edu	37	6	158505199	158505199	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	6	158505199	158505199	G	A	SNP	SYNJ2	ENST00000355585	human	ensembl	74_37	+1	known	silent	c.3201	p.T1067	0.982	NULL	pfam_Syja_N,pfam_DUF1866,pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ2	HGNC	ENSG00000078269				66	0	0.00	35	2	5.41
SYT15	0	genome.wustl.edu	37	10	46969283	46969283	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	10	46969283	46969283	G	T	SNP	SYT15	ENST00000374321	human	ensembl	74_37	-1	known	missense	c.178	p.P60T	0.008	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYT15	HGNC	ENSG00000204176	tier1	-	-	151	0	0.00	114	7	5.74
TBC1D2	0	genome.wustl.edu	37	9	100961830	100961830	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	100961830	100961830	G	A	SNP	TBC1D2	ENST00000375066	human	ensembl	74_37	-1	known	missense	c.2587	p.R863C	0.745	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Pleckstrin_homology,smart_Rab-GTPase-TBC_dom,pfscan_Pleckstrin_homology,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D2	HGNC	ENSG00000095383				35	0	0.00	28	2	6.67
TBC1D29	0	genome.wustl.edu	37	17	28890301	28890301	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	28890301	28890301	G	A	SNP	TBC1D29	ENST00000579181	human	ensembl	74_37	+1	known	missense	c.311	p.S104N	0.904	NULL	superfamily_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D29	HGNC	ENSG00000266733				56	0	0.00	55	6	9.68
TCERG1L	0	genome.wustl.edu	37	10	132915087	132915087	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	10	132915087	132915087	A	G	SNP	TCERG1L	ENST00000368642	human	ensembl	74_37	-1	known	missense	c.1370	p.F457S	1.000	pfam_FF_domain,superfamily_FF_domain,smart_FF_domain	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	TCERG1L	HGNC	ENSG00000176769	tier1	-	-	56	0	0.00	17	22	56.41
TCF20	0	genome.wustl.edu	37	22	42610573	42610575	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	22	42610573	42610575	AGG	-	DEL	TCF20	ENST00000359486	human	ensembl	74_37	-1	known	in_frame_del	c.739_737	p.S246in_frame_del	1.000:1.000:1.000	NULL	smart_Znf_PHD	-	no_errors	TCF20	HGNC	ENSG00000100207	tier1			35	0	0.00	18	3	14.29
TGM1	0	genome.wustl.edu	37	14	24727813	24727813	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	14	24727813	24727813	G	T	SNP	TGM1	ENST00000206765	human	ensembl	74_37	-1	known	missense	c.1226	p.T409K	0.974	pfam_Transglutaminase-like,smart_Transglutaminase-like	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM1	HGNC	ENSG00000092295				65	0	0.00	44	4	8.33
THADA	0	genome.wustl.edu	37	2	43735819	43735819	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	43735819	43735819	T	A	SNP	THADA	ENST00000405006	human	ensembl	74_37	-1	known	missense	c.3475	p.R1159W	1.000	pfam_DUF2428_death-receptor-like,superfamily_ARM-type_fold	pfam_DUF2428_death-receptor-like,superfamily_ARM-type_fold	-	no_errors	THADA	HGNC	ENSG00000115970	tier1	-	-	42	0	0.00	45	4	8.16
THNSL2	0	genome.wustl.edu	37	2	88478333	88478333	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	88478333	88478333	G	A	SNP	THNSL2	ENST00000324166	human	ensembl	74_37	+1	known	silent	c.603	p.P201	0.987	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF,tigrfam_Thr_synthase_like	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF,tigrfam_Thr_synthase_like	-	no_errors	THNSL2	HGNC	ENSG00000144115				42	0	0.00	35	2	5.41
THUMPD3	0	genome.wustl.edu	37	3	9426296	9426296	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	3	9426296	9426296	T	C	SNP	THUMPD3	ENST00000345094	human	ensembl	74_37	+1	known	missense	c.1448	p.I483T	1.000	NULL	pfam_RNA_methylase_dom,pfam_THUMP,smart_THUMP,pfscan_THUMP	-	no_errors	THUMPD3	HGNC	ENSG00000134077	tier1	-	-	23	0	0.00	12	6	33.33
TIMM17A	0	genome.wustl.edu	37	1	201932755	201932755	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	201932755	201932755	G	T	SNP	TIMM17A	ENST00000367287	human	ensembl	74_37	+1	known	missense	c.202	p.V68F	0.996	pfam_Tim17/Tim22/Tim23/PMP24,tigrfam_Tim17	pfam_Tim17/Tim22/Tim23/PMP24,tigrfam_Tim17	-	no_errors	TIMM17A	HGNC	ENSG00000134375	tier1	-	-	71	0	0.00	54	4	6.90
TLL1	0	genome.wustl.edu	37	4	166929126	166929126	+	Silent	SNP	T	T	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	4	166929126	166929126	T	G	SNP	TLL1	ENST00000061240	human	ensembl	74_37	+1	known	silent	c.843	p.P281	0.996	pfam_Peptidase_M12A,smart_Peptidase_Metallo,pirsf_BMP_1/tolloid-like	pfam_CUB_dom,pfam_Peptidase_M12A,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,smart_Peptidase_Metallo,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_BMP_1/tolloid-like,pfscan_CUB_dom,pfscan_EG-like_dom,prints_Peptidase_M12A	-	no_errors	TLL1	HGNC	ENSG00000038295	tier1	-	-	54	0	0.00	37	9	19.57
TMTC2	0	genome.wustl.edu	37	12	83290168	83290168	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	83290168	83290168	C	G	SNP	TMTC2	ENST00000321196	human	ensembl	74_37	+1	known	missense	c.1226	p.T409R	1.000	NULL	pfam_TPR_1,pfam_TPR_2,pfam_DUF1736,pfam_TPR-4,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC2	HGNC	ENSG00000179104				66	0	0.00	49	3	5.77
TNPO3	0	genome.wustl.edu	37	7	128645134	128645134	+	Nonsense_Mutation	SNP	A	A	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	128645134	128645134	A	T	SNP	TNPO3	ENST00000393245	human	ensembl	74_37	-1	known	nonsense	c.632	p.L211*	1.000	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	-	no_errors	TNPO3	HGNC	ENSG00000064419	tier1	-	-	59	0	0.00	46	4	8.00
TONSL	0	genome.wustl.edu	37	8	145661646	145661646	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	145661646	145661646	C	T	SNP	TONSL	ENST00000409379	human	ensembl	74_37	-1	known	missense	c.2170	p.A724T	0.039	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TONSL	HGNC	ENSG00000160949	tier1	-	-	70	0	0.00	39	5	11.36
TP53	0	genome.wustl.edu	37	17	7578526	7578526	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	7578526	7578526	C	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.404	p.C135F	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	41	0	0.00	13	20	60.61
TPTE	0	genome.wustl.edu	37	21	10914363	10914363	+	Silent	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	21	10914363	10914363	C	T	SNP	TPTE	ENST00000361285	human	ensembl	74_37	-1	known	silent	c.1356	p.S452	0.768	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pfscan_Tensin_phosphatase_C2-dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Ion_trans_dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE	HGNC	ENSG00000166157	tier1	-	-	148	0	0.00	72	18	20.00
TRHDE	0	genome.wustl.edu	37	12	72666653	72666653	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	72666653	72666653	G	A	SNP	TRHDE	ENST00000261180	human	ensembl	74_37	+1	known	missense	c.95	p.R32H	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657	tier1	-	-	19	0	0.00	6	4	40.00
TRIM33	0	genome.wustl.edu	37	1	114969885	114969885	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	114969885	114969885	G	T	SNP	TRIM33	ENST00000358465	human	ensembl	74_37	-1	known	missense	c.1334	p.A445E	1.000	smart_Bbox_C	pfam_Bromodomain,pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	TRIM33	HGNC	ENSG00000197323	tier1	-	-	71	0	0.00	51	4	7.27
TRPC7	0	genome.wustl.edu	37	5	135601939	135601939	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	5	135601939	135601939	C	A	SNP	TRPC7	ENST00000513104	human	ensembl	74_37	-1	known	missense	c.1314	p.W438C	1.000	tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC7_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC7	HGNC	ENSG00000069018	tier1	-	-	126	0	0.00	70	4	5.41
TTF1	0	genome.wustl.edu	37	9	135251460	135251460	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	135251460	135251460	C	T	SNP	TTF1	ENST00000334270	human	ensembl	74_37	-1	known	missense	c.2560	p.A854T	0.000	NULL	superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	TTF1	HGNC	ENSG00000125482	tier1	-	-	50	0	0.00	67	4	5.63
TTF2	0	genome.wustl.edu	37	1	117633213	117633213	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	117633213	117633213	G	T	SNP	TTF2	ENST00000369466	human	ensembl	74_37	+1	known	missense	c.2556	p.E852D	0.165	pfam_SNF2_N,superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_Znf_GRF,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	TTF2	HGNC	ENSG00000116830	tier1	-	-	77	0	0.00	49	4	7.55
TTN	0	genome.wustl.edu	37	2	179475827	179475827	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	179475827	179475827	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.43325	p.A14442E	0.967	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	64	0	0.00	25	19	43.18
TUBA8	0	genome.wustl.edu	37	22	18609704	18609704	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	22	18609704	18609704	G	T	SNP	TUBA8	ENST00000330423	human	ensembl	74_37	+1	known	missense	c.959	p.R320L	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA8	HGNC	ENSG00000183785				60	0	0.00	30	4	11.76
UBBP4	0	genome.wustl.edu	37	17	21731555	21731555	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	21731555	21731555	C	A	SNP	UBBP4	ENST00000578713	human	ensembl	74_37	+1	putative	missense	c.630	p.D210E	1.000	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	UBBP4	HGNC	ENSG00000263563	tier1	-	-	86	0	0.00	55	5	8.33
UBE2U	0	genome.wustl.edu	37	1	64680522	64680522	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	64680522	64680522	G	T	SNP	UBE2U	ENST00000371076	human	ensembl	74_37	+1	known	nonsense	c.364	p.E122*	0.752	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2U	HGNC	ENSG00000177414	tier1	-	-	111	0	0.00	67	4	5.63
UNC13B	0	genome.wustl.edu	37	9	35386232	35386232	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	35386232	35386232	C	T	SNP	UNC13B	ENST00000378496	human	ensembl	74_37	+1	known	missense	c.2789	p.S930F	1.000	pfam_Ca-dep_secretion_activator	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13B	HGNC	ENSG00000198722				60	0	0.00	37	2	5.13
UNC5D	0	genome.wustl.edu	37	8	35631964	35631964	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	35631964	35631964	C	A	SNP	UNC5D	ENST00000404895	human	ensembl	74_37	+1	known	missense	c.2626	p.Q876K	1.000	pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain	pfam_ZU5,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Death_domain,pfam_Immunoglobulin,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5D	HGNC	ENSG00000156687	tier1	-	-	61	0	0.00	20	25	55.56
UNCX	0	genome.wustl.edu	37	7	1273297	1273297	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	1273297	1273297	C	T	SNP	UNCX	ENST00000316333	human	ensembl	74_37	+1	known	missense	c.416	p.A139V	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	UNCX	HGNC	ENSG00000164853	tier1	-	-	118	0	0.00	122	9	6.87
USH2A	0	genome.wustl.edu	37	1	215990529	215990529	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	215990529	215990529	T	C	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.9380	p.Q3127R	0.941	superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	30	0	0.00	19	3	13.64
USH2A	0	genome.wustl.edu	37	1	215853681	215853681	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	215853681	215853681	G	T	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.12104	p.P4035Q	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781				43	0	0.00	31	2	6.06
VANGL2	0	genome.wustl.edu	37	1	160394067	160394067	+	Silent	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	160394067	160394067	G	A	SNP	VANGL2	ENST00000368061	human	ensembl	74_37	+1	known	silent	c.1299	p.T433	0.996	pfam_Strabismus,pirsf_Strabismus	pfam_Strabismus,pirsf_Strabismus	-	no_errors	VANGL2	HGNC	ENSG00000162738	tier1	-	-	57	0	0.00	36	11	23.40
VAT1	0	genome.wustl.edu	37	17	41170790	41170790	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	41170790	41170790	G	T	SNP	VAT1	ENST00000355653	human	ensembl	74_37	-1	known	missense	c.414	p.N138K	0.927	superfamily_GroES-like,smart_PKS_ER	pfam_ADH_C,pfam_ADH_GroES-like,superfamily_GroES-like,smart_PKS_ER	-	no_errors	VAT1	HGNC	ENSG00000108828				41	0	0.00	38	3	7.32
VCAN	0	genome.wustl.edu	37	5	82817499	82817499	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	5	82817499	82817499	G	T	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	missense	c.3374	p.R1125L	0.000	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427				45	0	0.00	28	2	6.67
VCL	0	genome.wustl.edu	37	10	75877901	75877901	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	10	75877901	75877901	G	T	SNP	VCL	ENST00000211998	human	ensembl	74_37	+1	known	missense	c.3379	p.V1127F	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Vinculin	-	no_errors	VCL	HGNC	ENSG00000035403	tier1	-	-	39	0	0.00	19	10	34.48
VPS13B	0	genome.wustl.edu	37	8	100568859	100568860	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	100568859	100568860	-	T	INS	VPS13B	ENST00000358544	human	ensembl	74_37	+1	known	frame_shift_ins	c.5002_5003	p.E1669fs	0.994:0.998	NULL	pfam_Autophagy-rel_C	-	no_errors	VPS13B	HGNC	ENSG00000132549	tier1			34	0	0.00	10	2	16.67
WBP4	0	genome.wustl.edu	37	13	41654921	41654921	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	13	41654921	41654921	A	G	SNP	WBP4	ENST00000379487	human	ensembl	74_37	+1	known	missense	c.896	p.E299G	1.000	NULL	pfam_WW_dom,pfam_Znf_U1-C,superfamily_WW_dom,smart_Znf_U1,smart_WW_dom,pfscan_WW_dom,pfscan_Znf_C2H2_matrin	-	no_errors	WBP4	HGNC	ENSG00000120688	tier1	-	-	56	0	0.00	41	4	8.89
WDR37	0	genome.wustl.edu	37	10	1170271	1170271	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	10	1170271	1170271	G	T	SNP	WDR37	ENST00000263150	human	ensembl	74_37	+1	known	missense	c.1217	p.R406L	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR37	HGNC	ENSG00000047056				83	0	0.00	46	3	6.00
WDR45B	0	genome.wustl.edu	37	17	80606364	80606365	+	RNA	INS	-	-	CGTG			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	80606364	80606365	-	CGTG	INS	WDR45B	ENST00000574828	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.042:0.012	-	-	-	no_errors	WDR45B	HGNC	ENSG00000141580	tier1			8	0	0.00	3	5	62.50
WDR54	0	genome.wustl.edu	37	2	74649471	74649471	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	2	74649471	74649471	G	T	SNP	WDR54	ENST00000348227	human	ensembl	74_37	+1	known	missense	c.191	p.G64V	0.995	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR54	HGNC	ENSG00000005448	tier1	-	-	40	0	0.00	17	11	39.29
WISP1	0	genome.wustl.edu	37	8	134233036	134233036	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	8	134233036	134233036	G	A	SNP	WISP1	ENST00000250160	human	ensembl	74_37	+1	known	missense	c.562	p.D188N	0.776	pirsf_IGFBP_CNN	pfam_IGFBP-like,pfam_VWF_C,pfam_Cys_knot,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_IGFBP-like,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_Cys_knot_C,pirsf_IGFBP_CNN,pfscan_Cys_knot_C,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	WISP1	HGNC	ENSG00000104415	tier1	-	-	43	0	0.00	24	72	75.00
WNT2B	0	genome.wustl.edu	37	1	113057570	113057570	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	113057570	113057570	G	T	SNP	WNT2B	ENST00000369684	human	ensembl	74_37	+1	known	missense	c.257	p.C86F	1.000	pfam_Wnt,smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt2	-	no_errors	WNT2B	HGNC	ENSG00000134245	tier1	-	-	67	0	0.00	41	4	8.89
WSCD2	0	genome.wustl.edu	37	12	108589643	108589643	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	12	108589643	108589643	T	G	SNP	WSCD2	ENST00000261400	human	ensembl	74_37	+1	known	missense	c.34	p.F12V	1.000	NULL	pfam_WSC_carb-bd,superfamily_P-loop_NTPase,smart_WSC_carb-bd_subgr,pfscan_WSC_carb-bd	-	no_errors	WSCD2	HGNC	ENSG00000075035	tier1	-	-	47	0	0.00	14	6	30.00
WT1	0	genome.wustl.edu	37	11	32421555	32421555	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	11	32421555	32421555	G	A	SNP	WT1	ENST00000332351	human	ensembl	74_37	-1	known	missense	c.1037	p.T346M	0.151	pfam_Wilms_tumour_N	pfam_Wilms_tumour_N,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2,prints_Wilms_tumour	-	no_errors	WT1	HGNC	ENSG00000184937	tier1	-	-	73	0	0.00	39	12	23.53
WWC1	0	genome.wustl.edu	37	5	167881030	167881032	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	5	167881030	167881032	GGA	-	DEL	WWC1	ENST00000265293	human	ensembl	74_37	+1	known	in_frame_del	c.2583_2585	p.E865in_frame_del	0.823:0.847:0.815	NULL	pfam_WW_dom,superfamily_C2_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WWC1	HGNC	ENSG00000113645	tier1			39	0	0.00	33	4	10.81
XAF1	0	genome.wustl.edu	37	17	6674047	6674047	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	17	6674047	6674047	C	T	SNP	XAF1	ENST00000361842	human	ensembl	74_37	+1	known	missense	c.593	p.A198V	0.000	NULL	superfamily_TRAF-like,pfscan_Znf_TRAF	-	no_errors	XAF1	HGNC	ENSG00000132530	tier1	-	-	53	0	0.00	42	4	8.70
ZAN	0	genome.wustl.edu	37	7	100377345	100377345	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	100377345	100377345	C	T	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	missense	c.6592	p.P2198S	0.034	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839	tier1	-	-	75	0	0.00	55	12	17.91
ZC3H4	0	genome.wustl.edu	37	19	47569839	47569839	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	47569839	47569839	G	A	SNP	ZC3H4	ENST00000253048	human	ensembl	74_37	-1	known	missense	c.3686	p.P1229L	0.079	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H4	HGNC	ENSG00000130749	tier1	-	-	100	0	0.00	18	42	70.00
ZCCHC5	0	genome.wustl.edu	37	X	77913195	77913195	+	Silent	SNP	A	A	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	X	77913195	77913195	A	C	SNP	ZCCHC5	ENST00000321110	human	ensembl	74_37	-1	known	silent	c.723	p.T241	0.001	NULL	pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC5	HGNC	ENSG00000179300	tier1	-	-	51	0	0.00	9	40	81.63
ZCCHC6	0	genome.wustl.edu	37	9	88959945	88959945	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	9	88959945	88959945	T	A	SNP	ZCCHC6	ENST00000375963	human	ensembl	74_37	-1	known	missense	c.944	p.Q315L	1.000	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_U1,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC6	HGNC	ENSG00000083223	tier1	-	-	92	0	0.00	52	4	7.14
ZFP42	0	genome.wustl.edu	37	4	188924482	188924482	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	4	188924482	188924482	A	T	SNP	ZFP42	ENST00000326866	human	ensembl	74_37	+1	known	missense	c.521	p.K174M	0.599	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP42	HGNC	ENSG00000179059	tier1	-	-	27	0	0.00	6	15	71.43
ZKSCAN1	0	genome.wustl.edu	37	7	99630966	99630966	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	99630966	99630966	A	G	SNP	ZKSCAN1	ENST00000324306	human	ensembl	74_37	+1	known	missense	c.838	p.K280E	0.647	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN1	HGNC	ENSG00000106261	tier1	-	-	67	0	0.00	51	4	7.27
ZMYND8	0	genome.wustl.edu	37	20	45920598	45920598	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	20	45920598	45920598	T	C	SNP	ZMYND8	ENST00000536340	human	ensembl	74_37	-1	known	missense	c.623	p.Q208R	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain	pfam_DUF3544,pfam_Bromodomain,pfam_PWWP_dom,pfam_Znf_PHD-finger,pfam_Znf_MYND,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_MYND,pfscan_Znf_PHD-finger,pfscan_Bromodomain	-	no_errors	ZMYND8	HGNC	ENSG00000101040	tier1	-	-	34	0	0.00	50	4	7.41
ZNF177	0	genome.wustl.edu	37	19	9491694	9491694	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	9491694	9491694	G	T	SNP	ZNF177	ENST00000434737	human	ensembl	74_37	+1	known	missense	c.687	p.E229D	1.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF177	HGNC	ENSG00000188629	tier1	-	-	48	0	0.00	9	25	71.43
ZNF208	0	genome.wustl.edu	37	19	22154945	22154945	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	22154945	22154945	T	G	SNP	ZNF208	ENST00000397126	human	ensembl	74_37	-1	novel	missense	c.2891	p.K964T	0.006	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF208	HGNC	ENSG00000160321	tier1	-	-	71	0	0.00	49	4	7.55
ZNF283	0	genome.wustl.edu	37	19	44352455	44352455	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	44352455	44352455	G	T	SNP	ZNF283	ENST00000324461	human	ensembl	74_37	+1	known	nonsense	c.1702	p.E568*	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF283	HGNC	ENSG00000167637	tier1	-	-	85	0	0.00	22	63	73.26
ZNF431	0	genome.wustl.edu	37	19	21366433	21366433	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	21366433	21366433	C	A	SNP	ZNF431	ENST00000311048	human	ensembl	74_37	+1	known	missense	c.1327	p.L443I	0.002	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF431	HGNC	ENSG00000196705				69	0	0.00	35	2	5.41
ZNF500	0	genome.wustl.edu	37	16	4802882	4802882	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	4802882	4802882	G	T	SNP	ZNF500	ENST00000219478	human	ensembl	74_37	-1	known	missense	c.938	p.P313Q	0.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF500	HGNC	ENSG00000103199				70	0	0.00	22	4	15.38
ZNF521	0	genome.wustl.edu	37	18	22671957	22671957	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	18	22671957	22671957	G	T	SNP	ZNF521	ENST00000361524	human	ensembl	74_37	-1	known	missense	c.3747	p.F1249L	0.998	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF521	HGNC	ENSG00000198795	tier1	-	-	63	0	0.00	73	4	5.19
ZNF597	0	genome.wustl.edu	37	16	3486729	3486729	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	16	3486729	3486729	G	A	SNP	ZNF597	ENST00000301744	human	ensembl	74_37	-1	known	missense	c.970	p.R324C	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF597	HGNC	ENSG00000167981				50	0	0.00	36	2	5.26
ZNF644	0	genome.wustl.edu	37	1	91403316	91403316	+	Silent	SNP	T	T	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	91403316	91403316	T	G	SNP	ZNF644	ENST00000337393	human	ensembl	74_37	-1	known	silent	c.3414	p.S1138	0.999	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF644	HGNC	ENSG00000122482	tier1	-	-	68	0	0.00	34	10	22.73
ZNF676	0	genome.wustl.edu	37	19	22363641	22363641	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	22363641	22363641	G	T	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.878	p.S293Y	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109	tier1	-	-	74	0	0.00	65	7	9.72
ZNF676	0	genome.wustl.edu	37	19	22363653	22363653	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	22363653	22363653	G	T	SNP	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	missense	c.866	p.A289D	0.097	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109	tier1	-	-	77	0	0.00	65	9	12.16
ZNF773	0	genome.wustl.edu	37	19	58016677	58016677	+	Silent	SNP	A	A	G			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	19	58016677	58016677	A	G	SNP	ZNF773	ENST00000282292	human	ensembl	74_37	+1	known	silent	c.171	p.A57	0.009	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF773	HGNC	ENSG00000152439	tier1	rs199730365	-	54	0	0.00	54	9	14.29
ZNF789	0	genome.wustl.edu	37	7	99081750	99081750	+	Silent	SNP	C	C	A			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	7	99081750	99081750	C	A	SNP	ZNF789	ENST00000331410	human	ensembl	74_37	+1	known	silent	c.249	p.S83	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF789	HGNC	ENSG00000198556				58	0	0.00	37	2	5.13
ZNF831	0	genome.wustl.edu	37	20	57768421	57768421	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	20	57768421	57768421	C	T	SNP	ZNF831	ENST00000371030	human	ensembl	74_37	+1	novel	missense	c.2347	p.P783S	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF831	HGNC	ENSG00000124203	tier1	-	-	146	0	0.00	62	98	61.25
ZSWIM5	0	genome.wustl.edu	37	1	45484793	45484793	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NH-01A-11D-A37C-09	TCGA-L5-A8NH-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4eeafbb8-0bb7-43f2-8095-6dcd260ba5f8	ddee75f6-4848-4756-b16c-c467cf1cb918	1	45484793	45484793	C	T	SNP	ZSWIM5	ENST00000359600	human	ensembl	74_37	-1	known	missense	c.2891	p.S964N	1.000	NULL	pfscan_Znf_SWIM	-	no_errors	ZSWIM5	HGNC	ENSG00000162415	tier1	-	-	42	0	0.00	26	3	10.34
