Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA3	0	genome.wustl.edu	37	16	2345651	2345651	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	2345651	2345651	G	A	SNP	ABCA3	ENST00000301732	human	ensembl	74_37	-1	known	missense	c.2354	p.T785M	0.756	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA3	HGNC	ENSG00000167972	tier1	-	-	73	0	0.00	27	15	35.71
ACAA2	0	genome.wustl.edu	37	18	47320775	47320775	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	18	47320775	47320775	G	T	SNP	ACAA2	ENST00000285093	human	ensembl	74_37	-1	known	nonsense	c.452	p.S151*	0.000	pfam_Thiolase_N,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	pfam_Thiolase_N,pfam_Thiolase_C,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	-	no_errors	ACAA2	HGNC	ENSG00000167315				61	0	0.00	45	3	6.25
ACO2	0	genome.wustl.edu	37	22	41865178	41865178	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	22	41865178	41865178	C	G	SNP	ACO2	ENST00000216254	human	ensembl	74_37	+1	known	missense	c.28	p.R10G	1.000	NULL	pfam_Acoase/IPM_deHydtase_lsu_aba,pfam_AconitaseA/IPMdHydase_ssu_swvl,superfamily_Acoase/IPM_deHydtase_lsu_aba,superfamily_Aconitase/3IPM_dehydase_swvl,prints_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase_mito-like	-	no_errors	ACO2	HGNC	ENSG00000100412	tier1	-	-	83	0	0.00	33	37	52.86
ADAMTS16	0	genome.wustl.edu	37	5	5303454	5303454	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	5303454	5303454	A	G	SNP	ADAMTS16	ENST00000274181	human	ensembl	74_37	+1	known	missense	c.2863	p.T955A	0.020	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS16	HGNC	ENSG00000145536	tier1	-	-	40	0	0.00	18	18	50.00
ADC	0	genome.wustl.edu	37	1	33560275	33560275	+	Silent	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	33560275	33560275	C	G	SNP	ADC	ENST00000373441	human	ensembl	74_37	+1	known	silent	c.714	p.G238	0.999	pfam_De-COase2_N	pfam_De-COase2_N,pfam_De-COase2_C,superfamily_Ala_racemase/Decarboxylase_C,prints_Orn_de-COase,prints_Orn/DAP/Arg_de-COase	-	no_errors	ADC	HGNC	ENSG00000142920	tier1	-	-	79	0	0.00	40	18	31.03
ADCY8	0	genome.wustl.edu	37	8	131859748	131859748	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	131859748	131859748	A	C	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	missense	c.2424	p.D808E	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897	tier1	-	-	63	0	0.00	46	15	24.59
AGPS	0	genome.wustl.edu	37	2	178326678	178326678	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	178326678	178326678	G	T	SNP	AGPS	ENST00000264167	human	ensembl	74_37	+1	known	missense	c.928	p.V310L	0.993	pfam_Oxid_FAD_bind_N,superfamily_FAD-bd_2	pfam_FAD-linked_oxidase_C,pfam_Oxid_FAD_bind_N,superfamily_FAD-bd_2,superfamily_FAD-linked_Oxase-like_C	-	no_errors	AGPS	HGNC	ENSG00000018510	tier1	-	-	84	0	0.00	72	5	6.49
AJAP1	0	genome.wustl.edu	37	1	4832493	4832493	+	Silent	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	4832493	4832493	T	C	SNP	AJAP1	ENST00000378190	human	ensembl	74_37	+1	known	silent	c.1071	p.S357	0.007	NULL	NULL	-	no_errors	AJAP1	HGNC	ENSG00000196581	tier1	-	-	39	0	0.00	32	12	27.27
AKAP1	0	genome.wustl.edu	37	17	55182920	55182920	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	55182920	55182920	A	G	SNP	AKAP1	ENST00000337714	human	ensembl	74_37	+1	known	missense	c.95	p.H32R	0.405	NULL	pfam_Tudor,pfam_KH_dom_type_1,smart_KH_dom,smart_Tudor,pfscan_Tudor,pfscan_KH_dom_type_1	-	no_errors	AKAP1	HGNC	ENSG00000121057	tier1	-	-	62	0	0.00	16	24	60.00
AKAP17A	0	genome.wustl.edu	37	X	1712780	1712780	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	X	1712780	1712780	C	T	SNP	AKAP17A	ENST00000313871	human	ensembl	74_37	+1	known	missense	c.425	p.P142L	1.000	NULL	NULL	-	no_errors	AKAP17A	HGNC	ENSG00000197976	tier1	-	-	123	0	0.00	35	90	71.43
ANKRD30B	0	genome.wustl.edu	37	18	14851980	14851980	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	18	14851980	14851980	A	G	SNP	ANKRD30B	ENST00000358984	human	ensembl	74_37	+1	known	missense	c.3680	p.E1227G	0.211	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30B	HGNC	ENSG00000180777	tier1	-	-	64	0	0.00	56	22	27.85
ANKRD30BP2	0	genome.wustl.edu	37	21	14418386	14418386	+	RNA	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	21	14418386	14418386	A	T	SNP	ANKRD30BP2	ENST00000507941	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	ANKRD30BP2	HGNC	ENSG00000224309	tier1	rs201367790	-	17	0	0.00	14	5	26.32
APLNR	0	genome.wustl.edu	37	11	57003544	57003544	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	57003544	57003544	A	-	DEL	APLNR	ENST00000257254	human	ensembl	74_37	-1	known	frame_shift_del	c.935	p.F312fs	1.000	pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_TAS2_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM,prints_APJ_rcpt,prints_GPCR_Rhodpsn,prints_ATII_rcpt	-	no_errors	APLNR	HGNC	ENSG00000134817	tier1			55	0	0.00	30	4	11.76
APOB	0	genome.wustl.edu	37	2	21229517	21229517	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	21229517	21229517	C	A	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.10223	p.G3408V	1.000	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674	tier1	-	-	61	0	0.00	24	19	44.19
AQR	0	genome.wustl.edu	37	15	35212634	35212634	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	35212634	35212634	A	C	SNP	AQR	ENST00000156471	human	ensembl	74_37	-1	known	missense	c.1120	p.S374A	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	AQR	HGNC	ENSG00000021776	tier1	-	-	47	0	0.00	34	10	22.73
ARHGAP28	0	genome.wustl.edu	37	18	6870651	6870651	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	18	6870651	6870651	T	C	SNP	ARHGAP28	ENST00000400091	human	ensembl	74_37	+1	known	missense	c.874	p.Y292H	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP28	HGNC	ENSG00000088756	tier1	-	-	60	0	0.00	33	14	29.79
ARID1B	0	genome.wustl.edu	37	6	157521973	157521973	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	157521973	157521973	C	A	SNP	ARID1B	ENST00000367148	human	ensembl	74_37	+1	known	missense	c.4365	p.D1455E	0.880	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1B	HGNC	ENSG00000049618	tier1	-	-	57	0	0.00	45	34	43.04
ARID3B	0	genome.wustl.edu	37	15	74882286	74882286	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	74882286	74882286	A	G	SNP	ARID3B	ENST00000346246	human	ensembl	74_37	+1	known	missense	c.823	p.T275A	1.000	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID3B	HGNC	ENSG00000179361	tier1	-	-	64	0	0.00	28	24	46.15
ARIH2	0	genome.wustl.edu	37	3	48965152	48965152	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	48965152	48965152	T	A	SNP	ARIH2	ENST00000356401	human	ensembl	74_37	+1	known	missense	c.161	p.F54Y	1.000	NULL	pfam_Znf_C6HC,smart_Znf_RING,smart_Znf_C6HC,pfscan_Znf_RING	-	no_errors	ARIH2	HGNC	ENSG00000177479	tier1	-	-	70	0	0.00	48	15	23.81
ARL13B	0	genome.wustl.edu	37	3	93762078	93762078	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	93762078	93762078	G	T	SNP	ARL13B	ENST00000394222	human	ensembl	74_37	+1	known	nonsense	c.1018	p.E340*	1.000	NULL	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,prints_Small_GTPase_ARF/SAR,tigrfam_Small_GTP-bd_dom	-	no_errors	ARL13B	HGNC	ENSG00000169379	tier1	-	-	82	0	0.00	67	4	5.63
ARL5C	0	genome.wustl.edu	37	17	37317573	37317573	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	37317573	37317573	C	T	SNP	ARL5C	ENST00000269586	human	ensembl	74_37	-1	known	missense	c.287	p.R96Q	1.000	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,prints_Small_GTPase_ARF/SAR,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	ARL5C	HGNC	ENSG00000141748	tier1	-	-	52	0	0.00	11	15	57.69
ARRDC2	0	genome.wustl.edu	37	19	18119312	18119312	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	18119312	18119312	G	A	SNP	ARRDC2	ENST00000222250	human	ensembl	74_37	+1	known	missense	c.193	p.A65T	1.000	pfam_Arrestin-like_N,superfamily_Ig_E-set	pfam_Arrestin-like_N,pfam_Arrestin_C-like,superfamily_Ig_E-set	-	no_errors	ARRDC2	HGNC	ENSG00000105643	tier1	-	-	44	0	0.00	20	18	47.37
ASAP2	0	genome.wustl.edu	37	2	9515045	9515045	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	9515045	9515045	C	T	SNP	ASAP2	ENST00000281419	human	ensembl	74_37	+1	known	missense	c.1718	p.T573M	0.993	superfamily_Ankyrin_rpt-contain_dom	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ASAP2	HGNC	ENSG00000151693				59	0	0.00	35	2	5.41
ATG9B	0	genome.wustl.edu	37	7	150714208	150714208	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	150714208	150714208	A	C	SNP	ATG9B	ENST00000377974	human	ensembl	74_37	-1	known	missense	c.2204	p.V735G	1.000	NULL	pfam_Autophagy-rel_prot_9	-	no_errors	ATG9B	HGNC	ENSG00000181652	tier1	-	-	69	0	0.00	20	12	37.50
ATMIN	0	genome.wustl.edu	37	16	81076086	81076086	+	Splice_Site	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	81076086	81076086	G	A	SNP	ATMIN	ENST00000299575	human	ensembl	74_37	+1	known	splice_site	c.662+1	e3+1	1.000	-	-	-	no_errors	ATMIN	HGNC	ENSG00000166454				34	0	0.00	23	6	20.69
ATP10B	0	genome.wustl.edu	37	5	160115050	160115050	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	160115050	160115050	C	T	SNP	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	missense	c.32	p.R11Q	0.971	NULL	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10B	HGNC	ENSG00000118322				49	0	0.00	43	3	6.52
ATP2B2	0	genome.wustl.edu	37	3	10370464	10370464	+	RNA	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	10370464	10370464	A	C	SNP	ATP2B2	ENST00000467702	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ATP2B2	HGNC	ENSG00000157087	tier1	-	-	45	0	0.00	33	12	26.67
ATP6AP1	0	genome.wustl.edu	37	X	153660199	153660199	+	Silent	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	X	153660199	153660199	A	G	SNP	ATP6AP1	ENST00000369762	human	ensembl	74_37	+1	known	silent	c.312	p.A104	0.686	pfam_BIG/ATPase_V1_suS1	pfam_BIG/ATPase_V1_suS1	-	no_errors	ATP6AP1	HGNC	ENSG00000071553	tier1	-	-	33	0	0.00	11	15	57.69
ATP8B2	0	genome.wustl.edu	37	1	154315284	154315284	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	154315284	154315284	G	A	SNP	ATP8B2	ENST00000368489	human	ensembl	74_37	+1	known	missense	c.1399	p.V467I	0.503	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B2	HGNC	ENSG00000143515	tier1	-	-	62	0	0.00	50	4	7.27
B3GNT3	0	genome.wustl.edu	37	19	17922892	17922892	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	17922892	17922892	G	A	SNP	B3GNT3	ENST00000318683	human	ensembl	74_37	+1	known	silent	c.1080	p.Q360	0.022	NULL	pfam_Glyco_trans_31	-	no_errors	B3GNT3	HGNC	ENSG00000179913	tier1	-	-	35	0	0.00	27	4	12.90
BRCA1	0	genome.wustl.edu	37	17	41203114	41203114	+	Silent	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	41203114	41203114	G	T	SNP	BRCA1	ENST00000471181	human	ensembl	74_37	-1	known	silent	c.5361	p.I1787	1.000	pirsf_BRCA1,pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	pirsf_BRCA1,pfam_BRCT_dom,pfam_Znf_C3HC4_RING-type,superfamily_BRCT_dom,smart_Znf_RING,smart_BRCT_dom,prints_BRCA1,pfscan_BRCT_dom,pfscan_Znf_RING	-	no_errors	BRCA1	HGNC	ENSG00000012048	tier1	-	-	44	0	0.00	14	38	73.08
BRD7	0	genome.wustl.edu	37	16	50353169	50353169	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	50353169	50353169	C	A	SNP	BRD7	ENST00000394689	human	ensembl	74_37	-1	known	nonsense	c.1912	p.E638*	1.000	NULL	pfam_DUF3512,pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	BRD7	HGNC	ENSG00000166164				45	0	0.00	49	3	5.77
BSPRY	0	genome.wustl.edu	37	9	116116558	116116558	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	116116558	116116558	G	C	SNP	BSPRY	ENST00000374183	human	ensembl	74_37	+1	known	missense	c.240	p.Q80H	1.000	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	-	no_errors	BSPRY	HGNC	ENSG00000119411	tier1	-	-	57	0	0.00	39	18	31.58
C16orf54	0	genome.wustl.edu	37	16	29755699	29755699	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	29755699	29755699	G	C	SNP	C16orf54	ENST00000329410	human	ensembl	74_37	-1	known	missense	c.574	p.P192A	0.150	NULL	NULL	-	no_errors	C16orf54	HGNC	ENSG00000185905	tier1	-	-	39	0	0.00	10	7	41.18
C17orf99	0	genome.wustl.edu	37	17	76160528	76160528	+	RNA	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	76160528	76160528	G	T	SNP	C17orf99	ENST00000451352	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	C17orf99	HGNC	ENSG00000187997	tier1	-	-	25	0	0.00	11	16	59.26
C1orf158	0	genome.wustl.edu	37	1	12806383	12806383	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	12806383	12806383	T	G	SNP	C1orf158	ENST00000288048	human	ensembl	74_37	+1	known	missense	c.5	p.F2C	0.067	NULL	NULL	-	no_errors	C1orf158	HGNC	ENSG00000157330	tier1	-	-	61	0	0.00	74	23	23.71
C1orf194	0	genome.wustl.edu	37	1	109649280	109649280	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	109649280	109649280	T	C	SNP	C1orf194	ENST00000369948	human	ensembl	74_37	-1	known	missense	c.316	p.T106A	0.223	pfam_DUF3695	pfam_DUF3695	-	no_errors	C1orf194	HGNC	ENSG00000179902				82	0	0.00	38	4	9.52
C4orf50	0	genome.wustl.edu	37	4	5977670	5977670	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	4	5977670	5977670	G	T	SNP	C4orf50	ENST00000531445	human	ensembl	74_37	-1	known	missense	c.1603	p.Q535K	0.002	NULL	NULL	-	no_errors	C4orf50	HGNC	ENSG00000181215	tier1	-	-	83	0	0.00	71	4	5.33
C6orf223	0	genome.wustl.edu	37	6	43970524	43970524	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	43970524	43970524	G	A	SNP	C6orf223	ENST00000336600	human	ensembl	74_37	+1	known	silent	c.390	p.A130	0.179	NULL	NULL	-	no_errors	C6orf223	HGNC	ENSG00000181577				34	0	0.00	34	4	10.53
C7	0	genome.wustl.edu	37	5	40934522	40934522	+	Silent	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	40934522	40934522	A	C	SNP	C7	ENST00000313164	human	ensembl	74_37	+1	known	silent	c.234	p.G78	0.942	pfam_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_MACPF,pfam_Sushi_SCR_CCP,pfam_LDrepeatLR_classA_rpt,pfam_Thrombospondin_1_rpt,superfamily_Sushi_SCR_CCP,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,smart_Sushi_SCR_CCP,smart_FacI_MAC,pfscan_LDrepeatLR_classA_rpt,pfscan_Sushi_SCR_CCP,pfscan_Thrombospondin_1_rpt,prints_MAC_perforin	-	no_errors	C7	HGNC	ENSG00000112936	tier1	-	-	82	0	0.00	59	21	25.61
CACNA1G	0	genome.wustl.edu	37	17	48646258	48646258	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	48646258	48646258	C	T	SNP	CACNA1G	ENST00000359106	human	ensembl	74_37	+1	known	silent	c.270	p.V90	0.994	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1G	HGNC	ENSG00000006283	tier1	-	-	44	0	0.00	45	11	19.64
CAMK1G	0	genome.wustl.edu	37	1	209784837	209784837	+	Silent	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	209784837	209784837	G	T	SNP	CAMK1G	ENST00000009105	human	ensembl	74_37	+1	known	silent	c.855	p.R285	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK1G	HGNC	ENSG00000008118				86	0	0.00	59	4	6.35
CAPN8	0	genome.wustl.edu	37	1	223803682	223803682	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	223803682	223803682	G	A	SNP	CAPN8	ENST00000366872	human	ensembl	74_37	-1	known	missense	c.1298	p.A433V	0.829	pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Calpain_III	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN8	HGNC	ENSG00000203697	tier1	-	-	74	0	0.00	84	5	5.62
CAPS2	0	genome.wustl.edu	37	12	75719046	75719046	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	12	75719046	75719046	C	T	SNP	CAPS2	ENST00000409445	human	ensembl	74_37	-1	known	nonsense	c.161	p.W54*	0.857	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CAPS2	HGNC	ENSG00000180881	tier1	-	-	42	0	0.00	28	7	20.00
CASQ1	0	genome.wustl.edu	37	1	160165779	160165779	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	160165779	160165779	C	T	SNP	CASQ1	ENST00000368078	human	ensembl	74_37	+1	known	silent	c.744	p.S248	0.758	pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Calsequestrin	pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Calsequestrin	-	no_errors	CASQ1	HGNC	ENSG00000143318	tier1	-	-	48	0	0.00	36	4	10.00
CAT	0	genome.wustl.edu	37	11	34490057	34490058	+	RNA	INS	-	-	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	34490057	34490058	-	A	INS	CAT	ENST00000525707	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	CAT	HGNC	ENSG00000121691	tier1			17	0	0.00	13	3	18.75
CATSPER2	0	genome.wustl.edu	37	15	43939656	43939656	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	43939656	43939656	C	A	SNP	CATSPER2	ENST00000321596	human	ensembl	74_37	-1	known	missense	c.155	p.R52L	0.000	NULL	pfam_Ion_trans_dom	-	no_errors	CATSPER2	HGNC	ENSG00000166762	tier1	-	-	38	0	0.00	28	4	12.50
CATSPERD	0	genome.wustl.edu	37	19	5754154	5754154	+	Silent	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	5754154	5754154	G	T	SNP	CATSPERD	ENST00000381624	human	ensembl	74_37	+1	known	silent	c.1176	p.L392	0.007	NULL	superfamily_WD40_repeat_dom	-	no_errors	CATSPERD	HGNC	ENSG00000174898	tier1	-	-	67	0	0.00	61	4	6.15
CBL	0	genome.wustl.edu	37	11	119169200	119169200	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	119169200	119169200	A	T	SNP	CBL	ENST00000264033	human	ensembl	74_37	+1	known	missense	c.2384	p.N795I	0.982	NULL	pfam_Adaptor_Cbl_N_hlx,pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Znf_C3HC4_RING-type,pfam_UBA/Ts_N,superfamily_Adaptor_Cbl_N_hlx,superfamily_UBA-like,smart_Znf_RING,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RING	-	no_errors	CBL	HGNC	ENSG00000110395	tier1	-	-	58	0	0.00	60	23	27.71
CCDC171	0	genome.wustl.edu	37	9	15723679	15723679	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	15723679	15723679	G	T	SNP	CCDC171	ENST00000380701	human	ensembl	74_37	+1	known	nonsense	c.1426	p.E476*	0.976	NULL	superfamily_STAT_TF_coiled-coil	-	no_errors	CCDC171	HGNC	ENSG00000164989	tier1	-	-	92	0	0.00	87	5	5.43
CCDC30	0	genome.wustl.edu	37	1	42948562	42948563	+	RNA	INS	-	-	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	42948562	42948563	-	A	INS	CCDC30	ENST00000475614	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.003	-	-	-	no_errors	CCDC30	HGNC	ENSG00000186409	tier1			21	0	0.00	20	7	25.93
CCDC83	0	genome.wustl.edu	37	11	85593712	85593712	+	Silent	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	85593712	85593712	T	C	SNP	CCDC83	ENST00000280245	human	ensembl	74_37	+1	known	silent	c.337	p.L113	0.947	NULL	NULL	-	no_errors	CCDC83	HGNC	ENSG00000150676	tier1	-	-	47	0	0.00	42	10	19.23
CCL16	0	genome.wustl.edu	37	17	34305260	34305260	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	34305260	34305260	A	G	SNP	CCL16	ENST00000293275	human	ensembl	74_37	-1	known	missense	c.116	p.L39P	0.004	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL16	HGNC	ENSG00000161573				55	0	0.00	36	3	7.69
CD248	0	genome.wustl.edu	37	11	66082572	66082572	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	66082572	66082572	G	A	SNP	CD248	ENST00000311330	human	ensembl	74_37	-1	known	missense	c.1927	p.P643S	0.051	NULL	pfam_C-type_lectin,pfam_EGF-like_Ca-bd_dom,superfamily_C-type_lectin_fold,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_C-type_lectin	-	no_errors	CD248	HGNC	ENSG00000174807	tier1	-	-	78	0	0.00	43	23	34.85
CD27	0	genome.wustl.edu	37	12	6560765	6560765	+	RNA	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	12	6560765	6560765	C	T	SNP	CD27	ENST00000541233	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CD27	HGNC	ENSG00000139193	tier1	-	-	19	0	0.00	2	8	80.00
CD58	0	genome.wustl.edu	37	1	117078739	117078739	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	117078739	117078739	C	A	SNP	CD58	ENST00000369489	human	ensembl	74_37	-1	known	missense	c.476	p.W159L	0.077	NULL	NULL	-	no_errors	CD58	HGNC	ENSG00000116815				49	0	0.00	30	2	6.25
CFHR4	0	genome.wustl.edu	37	1	196887491	196887491	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	196887491	196887491	A	C	SNP	CFHR4	ENST00000367416	human	ensembl	74_37	+1	known	missense	c.1689	p.Q563H	0.011	superfamily_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CFHR4	HGNC	ENSG00000134365	tier1	-	-	55	0	0.00	34	16	32.00
CFP	0	genome.wustl.edu	37	X	47485920	47485920	+	Splice_Site	SNP	T	T	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	X	47485920	47485920	T	A	SNP	CFP	ENST00000247153	human	ensembl	74_37	-1	known	splice_site	c.941-2	e7-2	0.993	-	-	-	no_errors	CFP	HGNC	ENSG00000126759	tier1	-	-	34	0	0.00	41	17	29.31
CHAMP1	0	genome.wustl.edu	37	13	115090509	115090509	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	13	115090509	115090509	C	T	SNP	CHAMP1	ENST00000361283	human	ensembl	74_37	+1	known	nonsense	c.1192	p.R398*	0.995	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CHAMP1	HGNC	ENSG00000198824	tier1	-	-	47	0	0.00	26	23	46.94
CHD5	0	genome.wustl.edu	37	1	6196804	6196804	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	6196804	6196804	T	C	SNP	CHD5	ENST00000262450	human	ensembl	74_37	-1	known	missense	c.2558	p.K853R	1.000	pfam_SNF2_N,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD5	HGNC	ENSG00000116254	tier1	-	-	78	0	0.00	77	19	19.79
CHD8	0	genome.wustl.edu	37	14	21853819	21853819	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	14	21853819	21853819	G	C	SNP	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	missense	c.7699	p.P2567A	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888	tier1	-	-	52	0	0.00	28	19	40.43
CHD9	0	genome.wustl.edu	37	16	53358631	53358631	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	53358631	53358631	G	T	SNP	CHD9	ENST00000398510	human	ensembl	74_37	+1	known	missense	c.8518	p.V2840L	0.392	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200				44	0	0.00	51	3	5.56
CHRM3	0	genome.wustl.edu	37	1	240070895	240070895	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	240070895	240070895	T	A	SNP	CHRM3	ENST00000255380	human	ensembl	74_37	+1	known	missense	c.144	p.N48K	0.981	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Musac_Ach_M3_rcpt,prints_Musac_Ach_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CHRM3	HGNC	ENSG00000133019	tier1	-	-	81	0	0.00	30	17	36.17
CKAP5	0	genome.wustl.edu	37	11	46802011	46802011	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	46802011	46802011	G	T	SNP	CKAP5	ENST00000415402	human	ensembl	74_37	-1	known	missense	c.2274	p.S758R	1.000	superfamily_ARM-type_fold	pfam_CLASP_N_dom,pfam_HEAT,superfamily_ARM-type_fold,superfamily_Homing_endonucl,pfscan_HEAT_type_2	-	no_errors	CKAP5	HGNC	ENSG00000175216	tier1	-	-	59	0	0.00	50	4	7.41
CLDN17	0	genome.wustl.edu	37	21	31538814	31538814	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	21	31538814	31538814	A	C	SNP	CLDN17	ENST00000286808	human	ensembl	74_37	-1	known	missense	c.122	p.I41S	1.000	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin,prints_Claudin14,prints_Claudin8	-	no_errors	CLDN17	HGNC	ENSG00000156282	tier1	-	-	39	0	0.00	28	13	31.71
CNKSR2	0	genome.wustl.edu	37	X	21624945	21624945	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	X	21624945	21624945	C	T	SNP	CNKSR2	ENST00000379510	human	ensembl	74_37	+1	known	missense	c.2093	p.P698L	1.000	NULL	pfam_CNKSR2,pfam_CRIC_domain_Chordata,pfam_SAM_type1,pfam_Pleckstrin_homology,pfam_SAM_2,pfam_PDZ,superfamily_SAM/pointed,superfamily_PDZ,smart_SAM,smart_PDZ,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_SAM	-	no_errors	CNKSR2	HGNC	ENSG00000149970	tier1	-	-	46	0	0.00	30	21	41.18
CNOT1	0	genome.wustl.edu	37	16	58577327	58577327	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	58577327	58577327	A	C	SNP	CNOT1	ENST00000441024	human	ensembl	74_37	-1	known	missense	c.4618	p.F1540V	0.000	NULL	superfamily_ARM-type_fold	-	no_errors	CNOT1	HGNC	ENSG00000125107				49	0	0.00	31	10	24.39
COL15A1	0	genome.wustl.edu	37	9	101785706	101785706	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	101785706	101785706	T	C	SNP	COL15A1	ENST00000375001	human	ensembl	74_37	+1	known	missense	c.1829	p.L610P	0.614	NULL	pfam_Collagenase_NC10/endostatin,pfam_Collagen,superfamily_C-type_lectin_fold,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL15A1	HGNC	ENSG00000204291	tier1	-	-	31	0	0.00	58	4	6.45
COL6A1	0	genome.wustl.edu	37	21	47421259	47421259	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	21	47421259	47421259	G	A	SNP	COL6A1	ENST00000361866	human	ensembl	74_37	+1	known	missense	c.1915	p.V639I	0.951	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A1	HGNC	ENSG00000142156	tier1	-	-	67	0	0.00	37	19	33.93
COMMD2	0	genome.wustl.edu	37	3	149459348	149459348	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	149459348	149459348	T	G	SNP	COMMD2	ENST00000473414	human	ensembl	74_37	-1	known	missense	c.560	p.K187T	1.000	pfam_HCaRG	pfam_HCaRG	-	no_errors	COMMD2	HGNC	ENSG00000114744	tier1	-	-	60	0	0.00	54	15	21.74
CPS1	0	genome.wustl.edu	37	2	211521321	211521321	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	211521321	211521321	C	T	SNP	CPS1	ENST00000430249	human	ensembl	74_37	+1	known	missense	c.3649	p.P1217S	1.000	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_ATP-grasp_carboxylate-amine,pfam_Dala_Dala_lig_C,pfscan_ATP-grasp,tigrfam_CarbamoylP_synth_lsu	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_CarbamoylP_synth_lsu_oligo,pfam_GATASE,pfam_CarbamoylP_synth_lsu_N,pfam_MGS-like_dom,pfam_ATP-grasp_carboxylate-amine,pfam_Dala_Dala_lig_C,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu	-	no_errors	CPS1	HGNC	ENSG00000021826	tier1	-	-	63	0	0.00	89	5	5.32
CPSF7	0	genome.wustl.edu	37	11	61183740	61183740	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	61183740	61183740	G	T	SNP	CPSF7	ENST00000340437	human	ensembl	74_37	-1	known	missense	c.931	p.P311T	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CPSF7	HGNC	ENSG00000149532				50	0	0.00	41	3	6.82
CRB2	0	genome.wustl.edu	37	9	126133620	126133620	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	126133620	126133620	C	A	SNP	CRB2	ENST00000373631	human	ensembl	74_37	+1	known	missense	c.2199	p.F733L	0.002	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_EG-like_dom,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	CRB2	HGNC	ENSG00000148204	tier1	-	-	121	0	0.00	79	44	35.77
CSMD3	0	genome.wustl.edu	37	8	113421171	113421171	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	113421171	113421171	G	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.5486	p.S1829Y	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	35	0	0.00	28	6	17.65
CSMD3	0	genome.wustl.edu	37	8	114326842	114326842	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	114326842	114326842	G	A	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.359	p.S120L	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	51	0	0.00	31	13	29.55
CSN1S1	0	genome.wustl.edu	37	4	70798299	70798299	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	4	70798299	70798299	T	C	SNP	CSN1S1	ENST00000246891	human	ensembl	74_37	+1	known	missense	c.26	p.L9P	0.999	NULL	NULL	-	no_errors	CSN1S1	HGNC	ENSG00000126545	tier1	-	-	74	0	0.00	88	23	20.72
CSPG4	0	genome.wustl.edu	37	15	75968270	75968270	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	75968270	75968270	T	C	SNP	CSPG4	ENST00000308508	human	ensembl	74_37	-1	known	missense	c.6590	p.E2197G	0.044	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	-	no_errors	CSPG4	HGNC	ENSG00000173546	tier1	-	-	43	0	0.00	46	10	17.86
CTR9	0	genome.wustl.edu	37	11	10790026	10790026	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	10790026	10790026	C	T	SNP	CTR9	ENST00000361367	human	ensembl	74_37	+1	known	silent	c.2097	p.S699	0.991	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CTR9	HGNC	ENSG00000198730				38	0	0.00	23	9	28.12
CXorf30	0	genome.wustl.edu	37	X	36317100	36317100	+	Silent	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	X	36317100	36317100	T	G	SNP	CXorf30	ENST00000378657	human	ensembl	74_37	+1	known	silent	c.33	p.T11	0.000	NULL	NULL	-	no_errors	CXorf30	HGNC	ENSG00000205081	tier1	-	-	46	0	0.00	60	26	30.23
DCBLD1	0	genome.wustl.edu	37	6	117841079	117841079	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	117841079	117841079	T	-	DEL	DCBLD1	ENST00000338728	human	ensembl	74_37	+1	known	frame_shift_del	c.426	p.L144fs	0.025	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Coagulation_fac_5/8-C_type_dom,pfam_LCCL,pfam_CUB_dom,superfamily_Galactose-bd-like,superfamily_LCCL,superfamily_CUB_dom,smart_CUB_dom,smart_LCCL,smart_Coagulation_fac_5/8-C_type_dom,pfscan_CUB_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_LCCL	-	no_errors	DCBLD1	HGNC	ENSG00000164465	tier1			58	0	0.00	37	22	37.29
DCLRE1A	0	genome.wustl.edu	37	10	115608957	115608957	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	10	115608957	115608957	T	-	DEL	DCLRE1A	ENST00000361384	human	ensembl	74_37	-1	known	frame_shift_del	c.1907	p.K636fs	1.000	NULL	pfam_DRMBL	-	no_errors	DCLRE1A	HGNC	ENSG00000198924	tier1			51	0	0.00	25	3	10.71
DCTN1	0	genome.wustl.edu	37	2	74598729	74598729	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	74598729	74598729	G	C	SNP	DCTN1	ENST00000361874	human	ensembl	74_37	-1	known	missense	c.580	p.P194A	1.000	NULL	pfam_Dynactin,pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_Polyketide_synth_docking,superfamily_P-loop_NTPase,pfscan_CAP-Gly_domain	-	no_errors	DCTN1	HGNC	ENSG00000204843	tier1	-	-	96	0	0.00	64	20	23.81
DDX56	0	genome.wustl.edu	37	7	44611155	44611155	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	44611155	44611155	G	C	SNP	DDX56	ENST00000258772	human	ensembl	74_37	-1	known	missense	c.826	p.L276V	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX56	HGNC	ENSG00000136271	tier1	-	-	48	0	0.00	52	11	17.19
DDX56	0	genome.wustl.edu	37	7	44608558	44608558	+	Silent	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	44608558	44608558	G	T	SNP	DDX56	ENST00000258772	human	ensembl	74_37	-1	known	silent	c.1327	p.R443	0.254	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX56	HGNC	ENSG00000136271				49	0	0.00	50	3	5.66
DECR1	0	genome.wustl.edu	37	8	91057130	91057130	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	91057130	91057130	C	T	SNP	DECR1	ENST00000220764	human	ensembl	74_37	+1	known	silent	c.792	p.G264	0.095	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH	-	no_errors	DECR1	HGNC	ENSG00000104325	tier1	-	-	97	0	0.00	68	15	18.07
DEPDC5	0	genome.wustl.edu	37	22	32215145	32215145	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	22	32215145	32215145	G	A	SNP	DEPDC5	ENST00000266091	human	ensembl	74_37	+1	known	missense	c.1804	p.A602T	1.000	NULL	pfam_IML1,pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	-	no_errors	DEPDC5	HGNC	ENSG00000100150				31	0	0.00	54	3	5.26
DLEU2L	0	genome.wustl.edu	37	1	64015236	64015237	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	64015236	64015237	-	A	INS	DLEU2L	ENST00000340052	human	ensembl	74_37	+1	known	frame_shift_ins	c.143_144	p.N51fs	0.562:0.557	NULL	NULL	-	no_errors	DLEU2L	HGNC	ENSG00000116652	tier1			57	0	0.00	54	26	32.50
DNAH1	0	genome.wustl.edu	37	3	52416392	52416392	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	52416392	52416392	G	T	SNP	DNAH1	ENST00000420323	human	ensembl	74_37	+1	known	missense	c.7862	p.W2621L	1.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase	-	no_errors	DNAH1	HGNC	ENSG00000114841	tier1	-	-	33	0	0.00	41	11	21.15
DNAH8	0	genome.wustl.edu	37	6	38705616	38705616	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	38705616	38705616	G	C	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	missense	c.333	p.K111N	0.998	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721	tier1	-	-	37	0	0.00	39	8	17.02
DNM3	0	genome.wustl.edu	37	1	172357927	172357927	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	172357927	172357927	A	G	SNP	DNM3	ENST00000358155	human	ensembl	74_37	+1	known	missense	c.2500	p.R834G	0.004	NULL	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin_SF	-	no_errors	DNM3	HGNC	ENSG00000197959	tier1	-	-	74	0	0.00	70	4	5.41
DNMT3B	0	genome.wustl.edu	37	20	31394058	31394058	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	20	31394058	31394058	A	T	SNP	DNMT3B	ENST00000328111	human	ensembl	74_37	+1	known	missense	c.2345	p.K782I	1.000	NULL	pfam_PWWP_dom,pfam_C5_MeTfrase,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	DNMT3B	HGNC	ENSG00000088305	tier1	-	-	66	0	0.00	27	16	37.21
DPY19L2P1	0	genome.wustl.edu	37	7	35131480	35131480	+	RNA	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	35131480	35131480	A	T	SNP	DPY19L2P1	ENST00000436258	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	DPY19L2P1	HGNC	ENSG00000189212				86	0	0.00	73	4	5.19
DRD1	0	genome.wustl.edu	37	5	174869480	174869480	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	174869480	174869480	G	A	SNP	DRD1	ENST00000393752	human	ensembl	74_37	-1	known	missense	c.623	p.A208V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Dopamine_D1_rcpt,prints_GPCR_Rhodpsn,prints_Dopamine_rcpt,prints_ADR_fam	-	no_errors	DRD1	HGNC	ENSG00000184845	tier1	-	-	63	0	0.00	33	17	34.00
DRD2	0	genome.wustl.edu	37	11	113285184	113285184	+	Splice_Site	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	113285184	113285184	C	A	SNP	DRD2	ENST00000355319	human	ensembl	74_37	-1	known	splice_site	c.724-1	e5-1	1.000	-	-	-	no_errors	DRD2	HGNC	ENSG00000149295	tier1	-	-	68	0	0.00	47	4	7.84
DST	0	genome.wustl.edu	37	6	56437023	56437023	+	Silent	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	56437023	56437023	T	C	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	silent	c.13503	p.E4501	1.000	superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	128	0	0.00	67	28	29.47
DUOX2	0	genome.wustl.edu	37	15	45392330	45392330	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	45392330	45392330	G	T	SNP	DUOX2	ENST00000389039	human	ensembl	74_37	-1	known	missense	c.3102	p.F1034L	0.996	NULL	pfam_Haem_peroxidase_animal,pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_EF_hand_dom,superfamily_Haem_peroxidase,superfamily_Riboflavin_synthase-like_b-brl,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr,prints_Recoverin	-	no_errors	DUOX2	HGNC	ENSG00000140279				28	0	0.00	31	2	6.06
DUS2	0	genome.wustl.edu	37	16	68112390	68112390	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	68112390	68112390	G	T	SNP	DUS2	ENST00000358896	human	ensembl	74_37	+1	known	missense	c.1213	p.V405F	1.000	pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom	pfam_tRNA_hU_synthase,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom	-	no_errors	DUS2	HGNC	ENSG00000167264	tier1	-	-	77	0	0.00	46	22	32.35
EHMT2	0	genome.wustl.edu	37	6	31855704	31855704	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	31855704	31855704	G	T	SNP	EHMT2	ENST00000395728	human	ensembl	74_37	-1	known	missense	c.1951	p.P651T	0.916	NULL	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT2	HGNC	ENSG00000204371	tier1	-	-	48	0	0.00	27	4	12.90
ENSG00000187812	0	genome.wustl.edu	37	15	76071775	76071775	+	RNA	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	76071775	76071775	C	T	SNP	ENSG00000187812	ENST00000395215	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.924	-	-	-	no_errors	RP11-24M17.5	Clone_based_vega_gene	ENSG00000187812	tier1	-	-	269	0	0.00	285	66	18.80
ENSG00000203849	0	genome.wustl.edu	37	1	142713947	142713947	+	RNA	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	142713947	142713947	A	C	SNP	ENSG00000203849	ENST00000369381	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	RP11-417J8.6	Clone_based_vega_gene	ENSG00000203849	tier1	-	-	94	0	0.00	61	23	27.38
ENSG00000214043	0	genome.wustl.edu	37	12	126932561	126932561	+	RNA	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	12	126932561	126932561	C	A	SNP	ENSG00000214043	ENST00000397346	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP5-944M2.3	Clone_based_vega_gene	ENSG00000214043	tier1	-	-	28	0	0.00	19	7	26.92
ENSG00000214043	0	genome.wustl.edu	37	12	126932562	126932562	+	RNA	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	12	126932562	126932562	A	G	SNP	ENSG00000214043	ENST00000397346	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP5-944M2.3	Clone_based_vega_gene	ENSG00000214043	tier1	-	-	29	0	0.00	20	7	25.93
ENSG00000221395	0	genome.wustl.edu	37	16	82875772	82875772	+	RNA	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	82875772	82875772	C	T	SNP	ENSG00000221395	ENST00000408468	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	AC099506.1	Clone_based_ensembl_gene	ENSG00000221395	tier1	-	-	22	0	0.00	18	4	18.18
ENSG00000221478	0	genome.wustl.edu	37	19	23369079	23369079	+	RNA	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	23369079	23369079	T	C	SNP	ENSG00000221478	ENST00000408551	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.119	-	-	-	no_errors	AC092329.1	Clone_based_ensembl_gene	ENSG00000221478	tier1	-	-	114	0	0.00	64	22	25.58
ENSG00000228404	0	genome.wustl.edu	37	21	47608483	47608483	+	RNA	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	21	47608483	47608483	C	A	SNP	ENSG00000228404	ENST00000415026	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	AP001468.58	Clone_based_vega_gene	ENSG00000228404	tier1	-	-	31	0	0.00	10	4	28.57
ENSG00000235994	0	genome.wustl.edu	37	6	168377339	168377339	+	RNA	DEL	A	A	-			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	168377339	168377339	A	-	DEL	ENSG00000235994	ENST00000441716	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	RP3-470B24.5	Clone_based_vega_gene	ENSG00000235994	tier1			113	0	0.00	105	27	20.45
ENSG00000255622	0	genome.wustl.edu	37	5	140535954	140535954	+	Silent	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	140535954	140535954	T	C	SNP	ENSG00000255622	ENST00000539533	human	ensembl	74_37	+1	known	silent	c.378	p.D126	0.061	pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB17	Uniprot_gn	ENSG00000255622	tier1	-	-	56	0	0.00	44	24	35.29
ENSG00000259932	0	genome.wustl.edu	37	15	45490862	45490862	+	RNA	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	45490862	45490862	T	C	SNP	ENSG00000259932	ENST00000568314	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTD-2651B20.7	Clone_based_vega_gene	ENSG00000259932	tier1	-	-	14	0	0.00	3	6	66.67
ENSG00000261405	0	genome.wustl.edu	37	16	33365566	33365566	+	RNA	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	33365566	33365566	C	G	SNP	ENSG00000261405	ENST00000568520	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.857	-	-	-	no_errors	RP11-23E10.4	Clone_based_vega_gene	ENSG00000261405	tier1	-	-	158	0	0.00	135	11	7.53
ENSG00000272299	0	genome.wustl.edu	37	13	64411550	64411550	+	RNA	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	13	64411550	64411550	A	G	SNP	ENSG00000272299	ENST00000606894	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.886	-	-	-	no_errors	RP11-394A14.4	Clone_based_vega_gene	ENSG00000272299	tier1	-	-	36	0	0.00	8	16	66.67
EPB41L1	0	genome.wustl.edu	37	20	34776333	34776333	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	20	34776333	34776333	G	T	SNP	EPB41L1	ENST00000338074	human	ensembl	74_37	+1	known	missense	c.938	p.R313L	1.000	pfam_FERM_PH-like_C,pirsf_Band_41_protein,pfscan_FERM_domain	pfam_Band_4.1_C,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_SAB_dom,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pirsf_Band_41_protein,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L1	HGNC	ENSG00000088367				45	0	0.00	36	2	5.26
EPHA5	0	genome.wustl.edu	37	4	66230799	66230799	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	4	66230799	66230799	T	G	SNP	EPHA5	ENST00000273854	human	ensembl	74_37	-1	known	missense	c.2172	p.E724D	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242	tier1	-	-	108	0	0.00	64	20	23.81
EPS15L1	0	genome.wustl.edu	37	19	16472781	16472781	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	16472781	16472781	C	T	SNP	EPS15L1	ENST00000455140	human	ensembl	74_37	-1	known	missense	c.2395	p.V799I	0.998	NULL	superfamily_Prefoldin,smart_EPS15_homology,smart_EF_hand_dom,smart_Ubiquitin-int_motif,pfscan_EF_hand_dom,pfscan_EPS15_homology,pfscan_Ubiquitin-int_motif	-	no_errors	EPS15L1	HGNC	ENSG00000127527	tier1	-	-	96	0	0.00	72	26	26.26
EPSTI1	0	genome.wustl.edu	37	13	43469163	43469163	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	13	43469163	43469163	C	T	SNP	EPSTI1	ENST00000313640	human	ensembl	74_37	-1	known	missense	c.930	p.M310I	1.000	NULL	NULL	-	no_errors	EPSTI1	HGNC	ENSG00000133106	tier1	-	-	90	0	0.00	18	24	57.14
ERCC6L	0	genome.wustl.edu	37	X	71427369	71427369	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	X	71427369	71427369	C	T	SNP	ERCC6L	ENST00000334463	human	ensembl	74_37	-1	known	silent	c.1248	p.L416	0.993	superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_TPR-contain_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6L	HGNC	ENSG00000186871				17	0	0.00	23	4	14.81
ERCC6L2	0	genome.wustl.edu	37	9	98717101	98717101	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	98717101	98717101	C	G	SNP	ERCC6L2	ENST00000456993	human	ensembl	74_37	+1	known	missense	c.1018	p.P340A	0.001	pfscan_Helicase_C	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	-	no_errors	ERCC6L2	HGNC	ENSG00000182150	tier1	-	-	82	0	0.00	39	19	32.76
EYS	0	genome.wustl.edu	37	6	65300523	65300523	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	65300523	65300523	A	G	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	missense	c.5237	p.F1746S	0.033	NULL	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	tier1	-	-	72	0	0.00	57	29	33.72
FAM189A1	0	genome.wustl.edu	37	15	29428638	29428638	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	29428638	29428638	G	A	SNP	FAM189A1	ENST00000261275	human	ensembl	74_37	-1	known	silent	c.858	p.P286	0.426	NULL	pfam_CD20-like	-	no_errors	FAM189A1	HGNC	ENSG00000104059	tier1	-	-	99	0	0.00	78	32	29.09
FAM205B	0	genome.wustl.edu	37	9	34834109	34834109	+	RNA	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	34834109	34834109	T	C	SNP	FAM205B	ENST00000455647	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM205B	HGNC	ENSG00000257198				40	0	0.00	9	9	50.00
FAM208A	0	genome.wustl.edu	37	3	56661674	56661674	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	56661674	56661674	T	G	SNP	FAM208A	ENST00000355628	human	ensembl	74_37	-1	known	missense	c.3783	p.L1261F	0.385	NULL	pfam_DUF3715	-	no_errors	FAM208A	HGNC	ENSG00000163946	tier1	-	-	44	0	0.00	65	17	20.73
FAT1	0	genome.wustl.edu	37	4	187628224	187628224	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	4	187628224	187628224	C	T	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.2758	p.V920I	1.000	superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857	tier1	-	-	33	0	0.00	35	13	27.08
FBLN2	0	genome.wustl.edu	37	3	13611943	13611943	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	13611943	13611943	C	T	SNP	FBLN2	ENST00000404922	human	ensembl	74_37	+1	known	missense	c.88	p.R30W	0.967	NULL	pfam_EGF-like_Ca-bd_dom,pfam_Anaphylatoxin/fibulin,superfamily_Anaphylatoxin_comp_syst,smart_EG-like_dom,smart_Anaphylatoxin/fibulin,smart_EGF-like_Ca-bd_dom,pfscan_Anaphylatoxin/fibulin,pfscan_EG-like_dom	-	no_errors	FBLN2	HGNC	ENSG00000163520	tier1	-	-	30	0	0.00	20	8	28.57
FBXW7	0	genome.wustl.edu	37	4	153244238	153244238	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	4	153244238	153244238	C	-	DEL	FBXW7	ENST00000281708	human	ensembl	74_37	-1	known	frame_shift_del	c.1919	p.S640fs	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW7	HGNC	ENSG00000109670	tier1			75	0	0.00	27	16	37.21
FCHSD1	0	genome.wustl.edu	37	5	141024481	141024481	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	141024481	141024481	G	A	SNP	FCHSD1	ENST00000435817	human	ensembl	74_37	-1	known	missense	c.1469	p.T490M	0.969	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_SH3_domain,pfam_SH3_2,pfam_FCH_dom,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain	-	no_errors	FCHSD1	HGNC	ENSG00000197948	tier1	-	-	64	0	0.00	40	22	35.48
FES	0	genome.wustl.edu	37	15	91432539	91432539	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	91432539	91432539	G	C	SNP	FES	ENST00000328850	human	ensembl	74_37	+1	known	missense	c.672	p.K224N	1.000	pirsf_Tyr_kinase_non-rcpt_Fes_subgr	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_FCH_dom,superfamily_Kinase-like_dom,superfamily_t-SNARE,smart_FCH_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,pfscan_FCH_dom,pfscan_SH2,pfscan_Prot_kinase_dom	-	no_errors	FES	HGNC	ENSG00000182511				52	0	0.00	56	3	5.08
FGD6	0	genome.wustl.edu	37	12	95603631	95603631	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	12	95603631	95603631	C	T	SNP	FGD6	ENST00000343958	human	ensembl	74_37	-1	known	missense	c.1429	p.A477T	0.002	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD6	HGNC	ENSG00000180263				94	0	0.00	53	3	5.36
FIGN	0	genome.wustl.edu	37	2	164467428	164467428	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	164467428	164467428	G	T	SNP	FIGN	ENST00000333129	human	ensembl	74_37	-1	known	missense	c.914	p.P305Q	1.000	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	FIGN	HGNC	ENSG00000182263				39	0	0.00	36	3	7.69
FLOT2	0	genome.wustl.edu	37	17	27209680	27209680	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	27209680	27209680	C	A	SNP	FLOT2	ENST00000394908	human	ensembl	74_37	-1	known	missense	c.376	p.D126Y	1.000	pfam_Band_7,smart_Band_7	pfam_Band_7,smart_Band_7	-	no_errors	FLOT2	HGNC	ENSG00000132589	tier1	-	-	12	0	0.00	8	7	46.67
FMNL1	0	genome.wustl.edu	37	17	43319299	43319299	+	Silent	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	43319299	43319299	C	G	SNP	FMNL1	ENST00000328118	human	ensembl	74_37	+1	known	silent	c.1671	p.A557	0.941	NULL	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FMNL1	HGNC	ENSG00000184922				11	0	0.00	11	3	21.43
FN1	0	genome.wustl.edu	37	2	216236888	216236888	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	216236888	216236888	G	T	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	missense	c.6458	p.P2153Q	1.000	NULL	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				55	0	0.00	69	4	5.48
FOXG1	0	genome.wustl.edu	37	14	29237869	29237869	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	14	29237869	29237869	A	G	SNP	FOXG1	ENST00000313071	human	ensembl	74_37	+1	known	missense	c.1384	p.S462G	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXG1	HGNC	ENSG00000176165	tier1	-	-	85	0	0.00	60	32	34.78
FYN	0	genome.wustl.edu	37	6	112015848	112015848	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	112015848	112015848	C	T	SNP	FYN	ENST00000354650	human	ensembl	74_37	-1	known	missense	c.1102	p.V368M	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	FYN	HGNC	ENSG00000010810	tier1	-	-	61	0	0.00	53	20	27.40
GALNT16	0	genome.wustl.edu	37	14	69818841	69818841	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	14	69818841	69818841	G	C	SNP	GALNT16	ENST00000337827	human	ensembl	74_37	+1	known	missense	c.1633	p.A545P	0.972	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT16	HGNC	ENSG00000100626	tier1	-	-	60	0	0.00	19	15	44.12
GALR1	0	genome.wustl.edu	37	18	74968128	74968128	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	18	74968128	74968128	G	T	SNP	GALR1	ENST00000299727	human	ensembl	74_37	+1	known	missense	c.681	p.L227F	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GAL1_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GAL1_rcpt,prints_GPCR_Rhodpsn,prints_Galanin_rcpt,prints_NPY_rcpt	-	no_errors	GALR1	HGNC	ENSG00000166573				59	0	0.00	54	3	5.26
GARNL3	0	genome.wustl.edu	37	9	130106619	130106619	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	130106619	130106619	G	T	SNP	GARNL3	ENST00000373387	human	ensembl	74_37	+1	known	splice_site	c.1356+1	e15+1	1.000	-	-	-	no_errors	GARNL3	HGNC	ENSG00000136895	tier1	-	-	84	0	0.00	39	25	39.06
GMPR	0	genome.wustl.edu	37	6	16290814	16290814	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	16290814	16290814	C	T	SNP	GMPR	ENST00000259727	human	ensembl	74_37	+1	known	silent	c.819	p.T273	0.214	pfam_IMP_DH_GMPRt,pirsf_GMP_reduct1,tigrfam_GMP_reduct1	pfam_IMP_DH_GMPRt,pirsf_GMP_reduct1,tigrfam_GMP_reduct1	-	no_errors	GMPR	HGNC	ENSG00000137198	tier1	-	-	53	0	0.00	17	12	40.00
GOLGB1	0	genome.wustl.edu	37	3	121413865	121413865	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	121413865	121413865	G	C	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	missense	c.5490	p.S1830R	0.401	NULL	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230	tier1	-	-	55	0	0.00	47	15	24.19
GPATCH3	0	genome.wustl.edu	37	1	27226852	27226852	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	27226852	27226852	G	A	SNP	GPATCH3	ENST00000361720	human	ensembl	74_37	-1	known	missense	c.82	p.H28Y	1.000	NULL	pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	GPATCH3	HGNC	ENSG00000198746	tier1	-	-	73	0	0.00	81	15	15.62
GPATCH3	0	genome.wustl.edu	37	1	27226854	27226856	+	In_Frame_Del	DEL	GCC	GCC	-			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	GCC	GCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	27226854	27226856	GCC	-	DEL	GPATCH3	ENST00000361720	human	ensembl	74_37	-1	known	in_frame_del	c.80_78	p.A27in_frame_del	1.000:1.000:1.000	NULL	pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	GPATCH3	HGNC	ENSG00000198746	tier1			73	0	0.00	81	13	13.83
GPC6	0	genome.wustl.edu	37	13	94680021	94680021	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	13	94680021	94680021	G	T	SNP	GPC6	ENST00000377047	human	ensembl	74_37	+1	known	missense	c.750	p.K250N	1.000	pfam_Glypican	pfam_Glypican	-	no_errors	GPC6	HGNC	ENSG00000183098	tier1	-	-	74	0	0.00	58	19	24.05
GPC6	0	genome.wustl.edu	37	13	94680086	94680086	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	13	94680086	94680086	A	G	SNP	GPC6	ENST00000377047	human	ensembl	74_37	+1	known	missense	c.815	p.N272S	1.000	pfam_Glypican	pfam_Glypican	-	no_errors	GPC6	HGNC	ENSG00000183098	tier1	-	-	74	0	0.00	57	21	26.92
GPC6	0	genome.wustl.edu	37	13	94680141	94680141	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	13	94680141	94680141	G	A	SNP	GPC6	ENST00000377047	human	ensembl	74_37	+1	known	silent	c.870	p.L290	0.984	pfam_Glypican	pfam_Glypican	-	no_errors	GPC6	HGNC	ENSG00000183098	tier1	-	-	63	0	0.00	41	16	28.07
GPR56	0	genome.wustl.edu	37	16	57690476	57690476	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	57690476	57690476	G	C	SNP	GPR56	ENST00000379696	human	ensembl	74_37	+1	known	missense	c.1114	p.E372Q	0.097	pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom	pfam_GPCR_2_secretin-like,pfam_GPS_dom,smart_GPS_dom,prints_GPCR_2_orphan_rcpt_GPR56,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR56	HGNC	ENSG00000205336	tier1	-	-	36	0	0.00	29	9	23.68
GPR98	0	genome.wustl.edu	37	5	90106393	90106393	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	90106393	90106393	G	A	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.15316	p.D5106N	0.012	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	tier1	-	-	33	0	0.00	27	10	27.03
GRK4	0	genome.wustl.edu	37	4	3030927	3030927	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	4	3030927	3030927	G	T	SNP	GRK4	ENST00000398052	human	ensembl	74_37	+1	known	splice_site	c.1061-1	e12-1	1.000	-	-	-	no_errors	GRK4	HGNC	ENSG00000125388	tier1	-	-	73	0	0.00	68	4	5.56
GRM1	0	genome.wustl.edu	37	6	146720652	146720652	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	146720652	146720652	C	T	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.2477	p.A826V	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822	tier1	-	-	63	0	0.00	44	26	37.14
HACE1	0	genome.wustl.edu	37	6	105239382	105239382	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	105239382	105239382	G	T	SNP	HACE1	ENST00000262903	human	ensembl	74_37	-1	known	missense	c.1071	p.F357L	1.000	NULL	pfam_HECT,pfam_Ankyrin_rpt,superfamily_HECT,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_HECT,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_HECT,prints_Ankyrin_rpt	-	no_errors	HACE1	HGNC	ENSG00000085382	tier1	-	-	68	0	0.00	66	4	5.71
HAPLN4	0	genome.wustl.edu	37	19	19369550	19369550	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	19369550	19369550	G	A	SNP	HAPLN4	ENST00000291481	human	ensembl	74_37	-1	known	missense	c.599	p.A200V	1.000	pfam_Link,superfamily_C-type_lectin_fold,smart_Link,pfscan_Link	pfam_Link,pfam_Ig_V-set,superfamily_C-type_lectin_fold,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Link,pfscan_Link,pfscan_Ig-like_dom,prints_Link	-	no_errors	HAPLN4	HGNC	ENSG00000187664	tier1	-	-	70	0	0.00	45	20	30.77
HECW2	0	genome.wustl.edu	37	2	197184343	197184343	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	197184343	197184343	T	G	SNP	HECW2	ENST00000260983	human	ensembl	74_37	-1	known	missense	c.1271	p.E424A	1.000	NULL	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	HECW2	HGNC	ENSG00000138411				19	0	0.00	16	3	15.79
HERC2P3	0	genome.wustl.edu	37	15	20588510	20588510	+	RNA	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	20588510	20588510	T	C	SNP	HERC2P3	ENST00000428453	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	HERC2P3	HGNC	ENSG00000180229	tier1	-	-	69	0	0.00	48	13	21.31
HIAT1	0	genome.wustl.edu	37	1	100547618	100547618	+	Silent	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	100547618	100547618	G	C	SNP	HIAT1	ENST00000370152	human	ensembl	74_37	+1	known	silent	c.1326	p.L442	1.000	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Tet-R_TetA/multi-R_MdtG	-	no_errors	HIAT1	HGNC	ENSG00000156875	tier1	-	-	29	0	0.00	38	4	9.52
HLX	0	genome.wustl.edu	37	1	221057991	221057991	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	221057991	221057991	C	G	SNP	HLX	ENST00000366903	human	ensembl	74_37	+1	known	missense	c.1412	p.A471G	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	HLX	HGNC	ENSG00000136630	tier1	-	-	47	0	0.00	20	8	28.57
HOXB2	0	genome.wustl.edu	37	17	46621976	46621976	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	46621976	46621976	C	A	SNP	HOXB2	ENST00000330070	human	ensembl	74_37	-1	known	nonsense	c.298	p.E100*	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXB2	HGNC	ENSG00000173917	tier1	-	-	171	0	0.00	128	45	26.01
HRNR	0	genome.wustl.edu	37	1	152187200	152187200	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	152187200	152187200	C	T	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	missense	c.6905	p.R2302H	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915	tier1	-	-	22	0	0.00	14	4	22.22
HRNR	0	genome.wustl.edu	37	1	152192643	152192643	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	152192643	152192643	A	C	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	missense	c.1462	p.S488A	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915	tier1	-	-	132	0	0.00	71	24	25.26
HSH2D	0	genome.wustl.edu	37	19	16268588	16268588	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	16268588	16268588	G	T	SNP	HSH2D	ENST00000253680	human	ensembl	74_37	+1	known	missense	c.1042	p.A348S	0.992	NULL	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	-	no_errors	HSH2D	HGNC	ENSG00000196684				56	0	0.00	52	3	5.45
IGSF22	0	genome.wustl.edu	37	11	18735564	18735564	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	18735564	18735564	C	A	SNP	IGSF22	ENST00000513874	human	ensembl	74_37	-1	known	missense	c.1930	p.D644Y	0.991	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF22	HGNC	ENSG00000179057	tier1	-	-	78	0	0.00	40	13	24.53
IL1RAPL1	0	genome.wustl.edu	37	X	29973907	29973907	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	X	29973907	29973907	G	A	SNP	IL1RAPL1	ENST00000302196	human	ensembl	74_37	+1	known	silent	c.2061	p.R687	1.000	NULL	pfam_TIR_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_TIR_dom,smart_Ig_sub,smart_Ig_sub2,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom	-	no_errors	IL1RAPL1	HGNC	ENSG00000169306	tier1	-	-	21	0	0.00	19	8	29.63
IRS1	0	genome.wustl.edu	37	2	227661413	227661413	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	227661413	227661413	C	T	SNP	IRS1	ENST00000305123	human	ensembl	74_37	-1	known	missense	c.2042	p.S681N	0.749	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047	tier1	-	-	64	0	0.00	34	13	27.66
ISX	0	genome.wustl.edu	37	22	35463110	35463110	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	22	35463110	35463110	C	G	SNP	ISX	ENST00000308700	human	ensembl	74_37	+1	known	missense	c.30	p.C10W	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	ISX	HGNC	ENSG00000175329	tier1	-	-	61	0	0.00	13	25	65.79
ITGA4	0	genome.wustl.edu	37	2	182350629	182350629	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	182350629	182350629	G	A	SNP	ITGA4	ENST00000397033	human	ensembl	74_37	+1	known	missense	c.1063	p.E355K	1.000	smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA4	HGNC	ENSG00000115232	tier1	-	-	74	0	0.00	55	18	24.66
ITIH5	0	genome.wustl.edu	37	10	7618751	7618751	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	10	7618751	7618751	C	T	SNP	ITIH5	ENST00000256861	human	ensembl	74_37	-1	known	missense	c.1643	p.R548Q	0.001	NULL	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH5	HGNC	ENSG00000123243	tier1	-	-	38	0	0.00	55	12	17.91
JPH3	0	genome.wustl.edu	37	16	87637893	87637893	+	RNA	DEL	C	C	-			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	87637893	87637893	C	-	DEL	JPH3	ENST00000301008	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	JPH3	HGNC	ENSG00000154118	tier1			67	0	0.00	65	7	9.72
KANK1	0	genome.wustl.edu	37	9	730236	730236	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	730236	730236	G	A	SNP	KANK1	ENST00000382297	human	ensembl	74_37	+1	known	missense	c.2884	p.A962T	0.017	smart_Ankyrin_rpt	pfam_Ankyrin_rpt,pfam_KN_motif,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK1	HGNC	ENSG00000107104				65	0	0.00	67	4	5.63
KCNH1	0	genome.wustl.edu	37	1	211093344	211093344	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	211093344	211093344	T	C	SNP	KCNH1	ENST00000271751	human	ensembl	74_37	-1	known	missense	c.1100	p.K367R	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH1	HGNC	ENSG00000143473	tier1	-	-	40	0	0.00	16	18	52.94
KCNJ15	0	genome.wustl.edu	37	21	39671472	39671472	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	21	39671472	39671472	C	T	SNP	KCNJ15	ENST00000328656	human	ensembl	74_37	+1	known	missense	c.289	p.P97S	0.001	pfam_K_chnl_inward-rec_Kir,pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.3,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.1	-	no_errors	KCNJ15	HGNC	ENSG00000157551	tier1	-	-	91	0	0.00	52	22	29.73
KCNK2	0	genome.wustl.edu	37	1	215259759	215259759	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	215259759	215259759	A	C	SNP	KCNK2	ENST00000444842	human	ensembl	74_37	+1	known	missense	c.95	p.K32T	1.000	NULL	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl_TREK,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TRAAK,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK2	HGNC	ENSG00000082482	tier1	-	-	83	0	0.00	37	10	21.28
KCNQ1DN	0	genome.wustl.edu	37	11	2892044	2892044	+	RNA	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	2892044	2892044	C	G	SNP	KCNQ1DN	ENST00000441418	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	KCNQ1DN	HGNC	ENSG00000237941	tier1	-	-	67	0	0.00	34	16	32.00
KCP	0	genome.wustl.edu	37	7	128534279	128534279	+	RNA	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	128534279	128534279	G	A	SNP	KCP	ENST00000297801	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	KCP	HGNC	ENSG00000135253	tier1	-	-	155	0	0.00	55	47	46.08
KDM4A	0	genome.wustl.edu	37	1	44132051	44132051	+	RNA	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	44132051	44132051	G	T	SNP	KDM4A	ENST00000472265	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	KDM4A	HGNC	ENSG00000066135	tier1	-	-	42	0	0.00	25	15	37.50
KDM4D	0	genome.wustl.edu	37	11	94731549	94731549	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	94731549	94731549	G	A	SNP	KDM4D	ENST00000335080	human	ensembl	74_37	+1	known	missense	c.1013	p.R338H	0.001	NULL	pfam_JmjC_dom,pfam_TF_JmjN,smart_TF_JmjN,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4D	HGNC	ENSG00000186280	tier1	-	-	43	0	0.00	32	22	40.74
KDM6A	0	genome.wustl.edu	37	X	44922979	44922979	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	X	44922979	44922979	G	A	SNP	KDM6A	ENST00000382899	human	ensembl	74_37	+1	known	missense	c.1861	p.A621T	1.000	NULL	pfam_JmjC_dom,pfam_TPR_1,smart_TPR_repeat,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	KDM6A	HGNC	ENSG00000147050	tier1	-	-	30	0	0.00	39	4	9.30
KIAA1456	0	genome.wustl.edu	37	8	12878968	12878968	+	Silent	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	12878968	12878968	T	C	SNP	KIAA1456	ENST00000524591	human	ensembl	74_37	+1	known	silent	c.780	p.T260	0.049	NULL	pfam_Methyltransf_11,pfam_Methyltransf_12,pfam_UbiE/COQ5_MeTrFase,pfam_Methyltransferase-rel	-	no_errors	KIAA1456	HGNC	ENSG00000250305	tier1	-	-	28	0	0.00	16	8	33.33
KIF13B	0	genome.wustl.edu	37	8	28929564	28929564	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	28929564	28929564	G	A	SNP	KIF13B	ENST00000524189	human	ensembl	74_37	-1	known	silent	c.4791	p.T1597	0.173	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_CAP-Gly_domain,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_CAP-Gly_domain,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_CAP-Gly_domain,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13B	HGNC	ENSG00000197892				10	0	0.00	1	2	66.67
KIF18A	0	genome.wustl.edu	37	11	28057867	28057867	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	28057867	28057867	C	T	SNP	KIF18A	ENST00000263181	human	ensembl	74_37	-1	known	missense	c.2293	p.D765N	0.001	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF18A	HGNC	ENSG00000121621	tier1	-	-	64	0	0.00	25	20	44.44
KIF27	0	genome.wustl.edu	37	9	86468750	86468750	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	86468750	86468750	C	T	SNP	KIF27	ENST00000297814	human	ensembl	74_37	-1	known	missense	c.3151	p.E1051K	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF27	HGNC	ENSG00000165115	tier1	-	-	51	0	0.00	56	17	23.29
KIFC2	0	genome.wustl.edu	37	8	145692681	145692681	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	145692681	145692681	G	T	SNP	KIFC2	ENST00000301332	human	ensembl	74_37	+1	known	missense	c.426	p.Q142H	0.356	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIFC2	HGNC	ENSG00000167702	tier1	-	-	100	0	0.00	51	20	28.17
LAX1	0	genome.wustl.edu	37	1	203740067	203740067	+	Splice_Site	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	203740067	203740067	T	C	SNP	LAX1	ENST00000442561	human	ensembl	74_37	+1	known	splice_site	c.199+2	e2+2	1.000	-	-	-	no_errors	LAX1	HGNC	ENSG00000122188	tier1	-	-	84	0	0.00	60	4	6.25
LDHAL6A	0	genome.wustl.edu	37	11	18478264	18478264	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	18478264	18478264	G	T	SNP	LDHAL6A	ENST00000280706	human	ensembl	74_37	+1	known	missense	c.37	p.A13S	0.000	NULL	pfam_Lactate/malate_DH_N,pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C,pirsf_L-lactate/malate_DH,prints_L-lactate/malate_DH,tigrfam_L-lactate_DH	-	no_errors	LDHAL6A	HGNC	ENSG00000166800	tier1	-	-	40	0	0.00	60	4	6.25
LRCH3	0	genome.wustl.edu	37	3	197559084	197559084	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	197559084	197559084	C	T	SNP	LRCH3	ENST00000438796	human	ensembl	74_37	+1	known	missense	c.998	p.S333L	1.000	NULL	pfam_Leu-rich_rpt,pfam_CH-domain,superfamily_CH-domain,smart_Leu-rich_rpt_typical-subtyp,smart_CH-domain,pfscan_CH-domain	-	no_errors	LRCH3	HGNC	ENSG00000186001				78	0	0.00	34	2	5.56
LRP3	0	genome.wustl.edu	37	19	33696342	33696342	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	33696342	33696342	G	A	SNP	LRP3	ENST00000253193	human	ensembl	74_37	+1	known	silent	c.666	p.A222	0.384	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_CUB_dom,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP3	HGNC	ENSG00000130881	tier1	-	-	16	0	0.00	11	7	38.89
LRRK2	0	genome.wustl.edu	37	12	40753152	40753152	+	Nonsense_Mutation	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	12	40753152	40753152	A	T	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	nonsense	c.6934	p.R2312*	0.999	superfamily_WD40_repeat_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1	-	-	55	0	0.00	47	12	20.34
MADD	0	genome.wustl.edu	37	11	47307015	47307015	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	47307015	47307015	C	T	SNP	MADD	ENST00000311027	human	ensembl	74_37	+1	known	silent	c.2425	p.L809	1.000	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	MADD	HGNC	ENSG00000110514				40	0	0.00	35	2	5.41
MAGEA10	0	genome.wustl.edu	37	X	151303878	151303878	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	X	151303878	151303878	T	C	SNP	MAGEA10	ENST00000244096	human	ensembl	74_37	-1	known	missense	c.215	p.E72G	0.008	pfam_Melanoma_ass_antigen_N	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEA10	HGNC	ENSG00000124260	tier1	-	-	21	0	0.00	10	14	58.33
MAN1B1	0	genome.wustl.edu	37	9	140000305	140000305	+	RNA	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	140000305	140000305	T	C	SNP	MAN1B1	ENST00000540391	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MAN1B1	HGNC	ENSG00000177239	tier1	-	-	30	0	0.00	28	6	17.65
MAPK11	0	genome.wustl.edu	37	22	50705432	50705432	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	22	50705432	50705432	C	T	SNP	MAPK11	ENST00000330651	human	ensembl	74_37	-1	known	missense	c.541	p.G181S	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_p38,prints_MAPK_JNK	-	no_errors	MAPK11	HGNC	ENSG00000185386	tier1	rs200417198	-	43	0	0.00	20	15	42.86
MAPKAP1	0	genome.wustl.edu	37	9	128347859	128347859	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	128347859	128347859	T	C	SNP	MAPKAP1	ENST00000265960	human	ensembl	74_37	-1	known	missense	c.646	p.S216G	0.795	pfam_SIN1	pfam_SIN1	-	no_errors	MAPKAP1	HGNC	ENSG00000119487	tier1	-	-	76	0	0.00	49	13	20.97
MARK1	0	genome.wustl.edu	37	1	220752752	220752752	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	220752752	220752752	C	T	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	silent	c.108	p.S36	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141	tier1	-	-	74	0	0.00	61	4	6.15
MAST2	0	genome.wustl.edu	37	1	46499769	46499769	+	Silent	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	46499769	46499769	C	A	SNP	MAST2	ENST00000361297	human	ensembl	74_37	+1	known	silent	c.3699	p.R1233	1.000	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST2	HGNC	ENSG00000086015	tier1	-	-	52	0	0.00	46	4	7.84
MBD3L3	0	genome.wustl.edu	37	19	7056628	7056628	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	7056628	7056628	A	G	SNP	MBD3L3	ENST00000333843	human	ensembl	74_37	-1	known	missense	c.332	p.L111S	0.000	NULL	NULL	-	no_errors	MBD3L3	HGNC	ENSG00000182315	tier1	-	-	184	0	0.00	201	31	13.36
MC3R	0	genome.wustl.edu	37	20	54824726	54824726	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	20	54824726	54824726	G	A	SNP	MC3R	ENST00000243911	human	ensembl	74_37	+1	known	missense	c.827	p.C276Y	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melcrt_ACTH_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melcrt_ACTH_rcpt,prints_Mcort_3_rcpt,prints_GPCR_Rhodpsn,prints_Melancort_rcpt	-	no_errors	MC3R	HGNC	ENSG00000124089				67	0	0.00	72	4	5.19
MCTP2	0	genome.wustl.edu	37	15	94841617	94841617	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	94841617	94841617	G	T	SNP	MCTP2	ENST00000357742	human	ensembl	74_37	+1	known	missense	c.123	p.R41S	0.000	NULL	pfam_C2_dom,pfam_PRibTrfase_C,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	MCTP2	HGNC	ENSG00000140563	tier1	-	-	51	0	0.00	45	4	8.16
MEA1	0	genome.wustl.edu	37	6	42980662	42980662	+	Splice_Site	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	42980662	42980662	A	T	SNP	MEA1	ENST00000244711	human	ensembl	74_37	-1	known	splice_site	c.406+2	e3+2	1.000	-	-	-	no_errors	MEA1	HGNC	ENSG00000124733	tier1	-	-	57	0	0.00	49	6	10.91
METTL21A	0	genome.wustl.edu	37	2	208489022	208489022	+	Silent	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	208489022	208489022	A	G	SNP	METTL21A	ENST00000406927	human	ensembl	74_37	-1	known	silent	c.78	p.F26	0.974	NULL	pfam_Nicotinamide_N-MeTfrase-like,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Small_mtfrase_dom	-	no_errors	METTL21A	HGNC	ENSG00000144401	tier1	-	-	107	0	0.00	70	36	33.96
MLLT4	0	genome.wustl.edu	37	6	168276141	168276141	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	168276141	168276141	G	T	SNP	MLLT4	ENST00000366806	human	ensembl	74_37	+1	known	missense	c.705	p.Q235H	1.000	NULL	pfam_Ras-assoc,pfam_Dil_domain,pfam_PDZ,pfam_FHA_dom,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_FHA_dom,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	-	no_errors	MLLT4	HGNC	ENSG00000130396	tier1	-	-	80	0	0.00	52	47	47.00
MLN	0	genome.wustl.edu	37	6	33766970	33766970	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	33766970	33766970	T	G	SNP	MLN	ENST00000430124	human	ensembl	74_37	-1	known	missense	c.146	p.K49T	1.000	pfam_Motilin_ghrelin	pfam_Motilin_assoc,pfam_Motilin_ghrelin	-	no_errors	MLN	HGNC	ENSG00000096395	tier1	-	-	44	0	0.00	37	10	21.28
MLXIPL	0	genome.wustl.edu	37	7	73012035	73012035	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	73012035	73012035	G	C	SNP	MLXIPL	ENST00000313375	human	ensembl	74_37	-1	known	missense	c.1080	p.N360K	0.975	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MLXIPL	HGNC	ENSG00000009950	tier1	-	-	36	0	0.00	6	13	68.42
MMP16	0	genome.wustl.edu	37	8	89339413	89339413	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	89339413	89339413	G	C	SNP	MMP16	ENST00000286614	human	ensembl	74_37	-1	known	missense	c.23	p.T8S	1.000	pirsf_Pept_M10A_Metazoans	pirsf_Pept_M10A_Metazoans,pfam_Hemopexin-like_repeat,pfam_Pept_M10_metallopeptidase,pfam_Pept_M10A_metallopeptidase_C,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,prints_Pept_M10A	-	no_errors	MMP16	HGNC	ENSG00000156103	tier1	-	-	71	0	0.00	42	16	27.59
MMS22L	0	genome.wustl.edu	37	6	97679434	97679434	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	97679434	97679434	C	G	SNP	MMS22L	ENST00000275053	human	ensembl	74_37	-1	known	missense	c.1397	p.C466S	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	MMS22L	HGNC	ENSG00000146263	tier1	-	-	84	0	0.00	53	17	24.29
MROH2B	0	genome.wustl.edu	37	5	41052670	41052670	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	41052670	41052670	A	G	SNP	MROH2B	ENST00000399564	human	ensembl	74_37	-1	known	missense	c.1127	p.L376P	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH2B	HGNC	ENSG00000171495	tier1	-	-	60	0	0.00	31	11	26.19
MRPL49	0	genome.wustl.edu	37	11	64889706	64889706	+	RNA	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	64889706	64889706	C	G	SNP	MRPL49	ENST00000524482	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MRPL49	HGNC	ENSG00000149792	tier1	-	-	39	0	0.00	24	11	31.43
MSRA	0	genome.wustl.edu	37	8	10159088	10159088	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	10159088	10159088	G	A	SNP	MSRA	ENST00000317173	human	ensembl	74_37	+1	known	missense	c.376	p.E126K	1.000	pfam_Met_Sox_Rdtase_MsrA,superfamily_Met_Sox_Rdtase_MsrA,tigrfam_Met_Sox_Rdtase_MsrA	pfam_Met_Sox_Rdtase_MsrA,superfamily_Met_Sox_Rdtase_MsrA,tigrfam_Met_Sox_Rdtase_MsrA	-	no_errors	MSRA	HGNC	ENSG00000175806	tier1	-	-	70	0	0.00	44	16	26.67
MT-TI	0	genome.wustl.edu	37	MT	4267	4267	+	RNA	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	MT	4267	4267	A	G	SNP	MT-TI	ENST00000387365	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-TI	HGNC	ENSG00000210100				9	0	0.00	7	3	30.00
MT-TP	0	genome.wustl.edu	37	MT	16015	16015	+	RNA	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	MT	16015	16015	T	C	SNP	MT-TP	ENST00000387461	human	ensembl	74_37	-1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-TP	HGNC	ENSG00000210196	tier1	-	-	13	0	0.00	0	10	100.00
MTG1	0	genome.wustl.edu	37	10	135207758	135207758	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	10	135207758	135207758	G	A	SNP	MTG1	ENST00000317502	human	ensembl	74_37	+1	known	missense	c.34	p.A12T	0.045	NULL	pfam_GTP_binding_domain,superfamily_P-loop_NTPase,pirsf_GTPase_MTG1,tigrfam_GTP-bd_ribosome_bgen_YlqF	-	no_errors	MTG1	HGNC	ENSG00000148824	tier1	-	-	17	0	0.00	15	4	21.05
MTUS2	0	genome.wustl.edu	37	13	29855933	29855933	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	13	29855933	29855933	G	A	SNP	MTUS2	ENST00000431530	human	ensembl	74_37	+1	known	missense	c.2767	p.A923T	0.001	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938	tier1	-	-	94	0	0.00	53	4	7.02
MUC5B	0	genome.wustl.edu	37	11	1247507	1247507	+	Splice_Site	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	1247507	1247507	G	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	splice_site	c.199+1	e3+1	0.453	-	-	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	206	0	0.00	208	83	28.33
MXI1	0	genome.wustl.edu	37	10	112045704	112045705	+	RNA	INS	-	-	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	10	112045704	112045705	-	A	INS	MXI1	ENST00000485566	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.991:0.827	-	-	-	no_errors	MXI1	HGNC	ENSG00000119950	tier1			54	0	0.00	24	5	17.24
MYH2	0	genome.wustl.edu	37	17	10441064	10441064	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	10441064	10441064	T	C	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	missense	c.1505	p.E502G	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414	tier1	-	-	199	0	0.00	49	56	53.33
MYO1D	0	genome.wustl.edu	37	17	31102928	31102929	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	31102928	31102929	-	A	INS	MYO1D	ENST00000318217	human	ensembl	74_37	-1	known	frame_shift_ins	c.518_517	p.K173fs	1.000:1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO1D	HGNC	ENSG00000176658	tier1			67	0	0.00	28	8	22.22
NAT2	0	genome.wustl.edu	37	8	18258116	18258116	+	Silent	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	18258116	18258116	T	C	SNP	NAT2	ENST00000286479	human	ensembl	74_37	+1	known	silent	c.603	p.D201	0.980	pfam_Arylamine_N-AcTrfase,prints_Arylamine_N-AcTrfase	pfam_Arylamine_N-AcTrfase,prints_Arylamine_N-AcTrfase	-	no_errors	NAT2	HGNC	ENSG00000156006	tier1	-	-	56	0	0.00	34	15	30.61
NDST4	0	genome.wustl.edu	37	4	115997920	115997920	+	Silent	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	4	115997920	115997920	G	T	SNP	NDST4	ENST00000264363	human	ensembl	74_37	-1	known	silent	c.273	p.L91	0.028	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST4	HGNC	ENSG00000138653				57	0	0.00	50	3	5.66
NEB	0	genome.wustl.edu	37	2	152471079	152471079	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	152471079	152471079	C	T	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.11312	p.R3771H	1.000	pfam_Nebulin_35r-motif,smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091	tier1	-	-	79	0	0.00	58	4	6.45
NHSL1	0	genome.wustl.edu	37	6	138794462	138794462	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	138794462	138794462	T	C	SNP	NHSL1	ENST00000427025	human	ensembl	74_37	-1	known	missense	c.464	p.D155G	1.000	NULL	NULL	-	no_errors	NHSL1	HGNC	ENSG00000135540	tier1	-	-	89	0	0.00	74	16	17.78
NIPBL	0	genome.wustl.edu	37	5	36995692	36995693	+	RNA	INS	-	-	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	36995692	36995693	-	T	INS	NIPBL	ENST00000503274	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.869:0.879	-	-	-	no_errors	NIPBL	HGNC	ENSG00000164190	tier1			39	0	0.00	24	5	17.24
NLGN1	0	genome.wustl.edu	37	3	173996750	173996750	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	173996750	173996750	T	G	SNP	NLGN1	ENST00000401917	human	ensembl	74_37	+1	known	missense	c.1079	p.V360G	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN1	HGNC	ENSG00000169760	tier1	-	-	41	0	0.00	26	12	31.58
NOXO1	0	genome.wustl.edu	37	16	2029801	2029801	+	Silent	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	2029801	2029801	T	C	SNP	NOXO1	ENST00000397280	human	ensembl	74_37	-1	known	silent	c.705	p.L235	0.000	NULL	pfam_SH3_domain,pfam_Phox,superfamily_Phox,superfamily_SH3_domain,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	NOXO1	HGNC	ENSG00000196408	tier1	-	-	62	0	0.00	26	14	35.00
NPIPB4	0	genome.wustl.edu	37	16	21890769	21890769	+	RNA	SNP	T	T	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	21890769	21890769	T	A	SNP	NPIPB4	ENST00000538859	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NPIPB4	HGNC	ENSG00000185864	tier1	-	-	196	0	0.00	118	16	11.94
NUP153	0	genome.wustl.edu	37	6	17626152	17626152	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	17626152	17626152	G	T	SNP	NUP153	ENST00000537253	human	ensembl	74_37	-1	known	missense	c.3881	p.T1294K	0.999	NULL	pfam_Nucleoporin_Nup153,pfam_Znf_RanBP2,pfam_Retro-transposon_transp_CS,smart_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	NUP153	HGNC	ENSG00000124789	tier1	-	-	54	0	0.00	40	4	9.09
OPN5	0	genome.wustl.edu	37	6	47775912	47775912	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	47775912	47775912	G	C	SNP	OPN5	ENST00000371211	human	ensembl	74_37	+1	known	missense	c.779	p.G260A	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Peropsin	-	no_errors	OPN5	HGNC	ENSG00000124818	tier1	-	-	69	0	0.00	40	13	24.53
OR11L1	0	genome.wustl.edu	37	1	248004771	248004771	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	248004771	248004771	C	A	SNP	OR11L1	ENST00000355784	human	ensembl	74_37	-1	known	missense	c.428	p.R143M	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR11L1	HGNC	ENSG00000197591	tier1	-	-	33	0	0.00	27	9	25.00
OR2A2	0	genome.wustl.edu	37	7	143807174	143807174	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	143807174	143807174	T	G	SNP	OR2A2	ENST00000408979	human	ensembl	74_37	+1	known	missense	c.499	p.F167V	0.981	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2A2	HGNC	ENSG00000221989	tier1	-	-	88	0	0.00	24	21	46.67
OR52J3	0	genome.wustl.edu	37	11	5068584	5068584	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	5068584	5068584	G	A	SNP	OR52J3	ENST00000380370	human	ensembl	74_37	+1	known	missense	c.829	p.V277I	0.005	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52J3	HGNC	ENSG00000205495	tier1	-	-	38	0	0.00	31	17	35.42
OR8G5	0	genome.wustl.edu	37	11	124135444	124135444	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	124135444	124135444	A	C	SNP	OR8G5	ENST00000524943	human	ensembl	74_37	+1	known	missense	c.722	p.N241T	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8G5	HGNC	ENSG00000255298	tier1	-	-	130	0	0.00	95	37	28.03
OSBP	0	genome.wustl.edu	37	11	59349001	59349001	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	59349001	59349001	T	G	SNP	OSBP	ENST00000263847	human	ensembl	74_37	-1	known	missense	c.1705	p.T569P	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBP	HGNC	ENSG00000110048	tier1	-	-	40	0	0.00	31	15	32.61
OVCH2	0	genome.wustl.edu	37	11	7718085	7718085	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	7718085	7718085	A	C	SNP	OVCH2	ENST00000454689	human	ensembl	74_37	-1	known	missense	c.1068	p.S356R	0.019	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Peptidase_S1,pfam_CUB_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,smart_Peptidase_S1,smart_CUB_dom,pfscan_CUB_dom,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	OVCH2	HGNC	ENSG00000183378	tier1	-	-	48	0	0.00	22	8	26.67
PAK6	0	genome.wustl.edu	37	15	40558404	40558404	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	40558404	40558404	C	T	SNP	PAK6	ENST00000260404	human	ensembl	74_37	+1	known	missense	c.566	p.S189L	0.006	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_CRIB_dom,superfamily_Kinase-like_dom,smart_CRIB_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRIB_dom,pfscan_Prot_kinase_dom	-	no_errors	PAK6	HGNC	ENSG00000137843	tier1	-	-	68	0	0.00	57	24	29.63
PAK7	0	genome.wustl.edu	37	20	9561175	9561175	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	20	9561175	9561175	A	C	SNP	PAK7	ENST00000353224	human	ensembl	74_37	-1	known	missense	c.607	p.L203V	0.972	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_CRIB_dom,superfamily_Kinase-like_dom,smart_CRIB_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRIB_dom,pfscan_Prot_kinase_dom	-	no_errors	PAK7	HGNC	ENSG00000101349	tier1	-	-	48	0	0.00	28	17	36.96
PAMR1	0	genome.wustl.edu	37	11	35489582	35489582	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	35489582	35489582	A	C	SNP	PAMR1	ENST00000278360	human	ensembl	74_37	-1	known	missense	c.787	p.L263V	1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Sushi_SCR_CCP,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_EG-like_dom,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1	-	no_errors	PAMR1	HGNC	ENSG00000149090	tier1	-	-	21	0	0.00	20	5	20.00
PANK4	0	genome.wustl.edu	37	1	2444348	2444348	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	2444348	2444348	C	G	SNP	PANK4	ENST00000378466	human	ensembl	74_37	-1	known	missense	c.1706	p.W569S	1.000	pfam_DUF89,superfamily_DUF89,pirsf_PanK_long	pfam_Type_II_PanK,pfam_DUF89,superfamily_DUF89,pirsf_PanK_long,tigrfam_Type_II_PanK	-	no_errors	PANK4	HGNC	ENSG00000157881	tier1	-	-	161	0	0.00	165	36	17.91
PCDH1	0	genome.wustl.edu	37	5	141242988	141242988	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	141242988	141242988	G	C	SNP	PCDH1	ENST00000287008	human	ensembl	74_37	-1	known	missense	c.2908	p.R970G	1.000	pfam_Protocadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH1	HGNC	ENSG00000156453	tier1	-	-	59	0	0.00	32	17	34.69
PCDH11X	0	genome.wustl.edu	37	X	91134272	91134272	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	X	91134272	91134272	G	A	SNP	PCDH11X	ENST00000373094	human	ensembl	74_37	+1	known	silent	c.3033	p.P1011	1.000	NULL	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11X	HGNC	ENSG00000102290	tier1	rs138111592	-	55	0	0.00	19	26	57.78
PCDHAC1	0	genome.wustl.edu	37	5	140307982	140307982	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	140307982	140307982	C	A	SNP	PCDHAC1	ENST00000253807	human	ensembl	74_37	+1	known	nonsense	c.1505	p.S502*	0.082	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHAC1	HGNC	ENSG00000248383	tier1	-	-	46	0	0.00	38	13	25.49
PCDHB3	0	genome.wustl.edu	37	5	140480810	140480810	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	140480810	140480810	G	A	SNP	PCDHB3	ENST00000231130	human	ensembl	74_37	+1	known	missense	c.577	p.E193K	0.984	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB3	HGNC	ENSG00000113205	tier1	-	-	43	0	0.00	25	10	28.57
PCDHGA11	0	genome.wustl.edu	37	5	140802465	140802465	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	140802465	140802465	C	T	SNP	PCDHGA11	ENST00000398587	human	ensembl	74_37	+1	known	silent	c.1671	p.N557	0.950	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA11	HGNC	ENSG00000253873	tier1	-	-	113	0	0.00	75	22	22.68
PCLO	0	genome.wustl.edu	37	7	82467549	82467549	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	82467549	82467549	A	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.14207	p.L4736R	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	69	0	0.00	15	19	55.88
PCLO	0	genome.wustl.edu	37	7	82581865	82581865	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	82581865	82581865	C	T	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.8404	p.A2802T	0.996	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	54	0	0.00	34	11	24.44
PDCD11	0	genome.wustl.edu	37	10	105181166	105181166	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	10	105181166	105181166	C	T	SNP	PDCD11	ENST00000369797	human	ensembl	74_37	+1	known	missense	c.2339	p.A780V	0.049	pfam_Rbsml_prot_S1_RNA-bd_dom,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,pfscan_Rbsml_prot_S1_RNA-bd_dom	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Suf,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_HAT,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,prints_Ribosomal_S1	-	no_errors	PDCD11	HGNC	ENSG00000148843				56	0	0.00	38	2	5.00
PDE10A	0	genome.wustl.edu	37	6	165829695	165829695	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	165829695	165829695	G	A	SNP	PDE10A	ENST00000539869	human	ensembl	74_37	-1	known	missense	c.1073	p.A358V	1.000	pfam_GAF,smart_GAF	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE10A	HGNC	ENSG00000112541	tier1	-	-	56	0	0.00	75	4	5.06
PDE1A	0	genome.wustl.edu	37	2	183051250	183051250	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	183051250	183051250	T	C	SNP	PDE1A	ENST00000456212	human	ensembl	74_37	-1	known	missense	c.1321	p.I441V	0.991	pfam_PDEase_catalytic_dom	pfam_PDEase_catalytic_dom,pfam_PDEase_N,superfamily_GRIP,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1A	HGNC	ENSG00000115252	tier1	-	-	41	0	0.00	21	10	32.26
PGM5	0	genome.wustl.edu	37	9	71015611	71015611	+	RNA	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	71015611	71015611	A	T	SNP	PGM5	ENST00000587852	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	PGM5	HGNC	ENSG00000154330	tier1	-	-	68	0	0.00	48	35	42.17
PIK3R3	0	genome.wustl.edu	37	1	46598535	46598535	+	RNA	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	46598535	46598535	A	G	SNP	PIK3R3	ENST00000493202	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PIK3R3	HGNC	ENSG00000117461	tier1	-	-	37	0	0.00	33	14	29.79
PITPNM2	0	genome.wustl.edu	37	12	123498552	123498552	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	12	123498552	123498552	C	T	SNP	PITPNM2	ENST00000320201	human	ensembl	74_37	-1	known	missense	c.116	p.G39D	1.000	pfam_PI_transfer	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM2	HGNC	ENSG00000090975	tier1	-	-	35	0	0.00	13	14	51.85
PITPNM3	0	genome.wustl.edu	37	17	6374666	6374666	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	6374666	6374666	A	C	SNP	PITPNM3	ENST00000262483	human	ensembl	74_37	-1	known	missense	c.1439	p.L480R	1.000	pfam_DDHD,pfscan_DDHD	pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD	-	no_errors	PITPNM3	HGNC	ENSG00000091622	tier1	-	-	62	0	0.00	43	15	25.86
PKD1	0	genome.wustl.edu	37	16	2164867	2164867	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	2164867	2164867	G	A	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	silent	c.2157	p.H719	0.956	tigrfam_Polycystin_cat	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710	tier1	-	-	123	0	0.00	93	33	26.19
PLBD2	0	genome.wustl.edu	37	12	113821938	113821938	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	12	113821938	113821938	A	C	SNP	PLBD2	ENST00000280800	human	ensembl	74_37	+1	known	missense	c.986	p.K329T	0.927	pfam_PLipase_B-like	pfam_PLipase_B-like	-	no_errors	PLBD2	HGNC	ENSG00000151176	tier1	-	-	71	0	0.00	25	23	47.92
PLCH1	0	genome.wustl.edu	37	3	155200283	155200283	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	155200283	155200283	A	C	SNP	PLCH1	ENST00000340059	human	ensembl	74_37	-1	known	missense	c.3556	p.L1186V	0.643	NULL	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCH1	HGNC	ENSG00000114805	tier1	-	-	41	0	0.00	27	15	35.71
PLCZ1	0	genome.wustl.edu	37	12	18872517	18872517	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	12	18872517	18872517	A	T	SNP	PLCZ1	ENST00000266505	human	ensembl	74_37	-1	known	missense	c.417	p.D139E	0.029	pfam_PLipase_C_EF-hand-like	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCZ1	HGNC	ENSG00000139151	tier1	-	-	30	0	0.00	13	6	31.58
PLEC	0	genome.wustl.edu	37	8	145001217	145001217	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	145001217	145001217	C	T	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	silent	c.4284	p.A1428	0.005	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209	tier1	-	-	52	0	0.00	37	4	9.76
POLI	0	genome.wustl.edu	37	18	51820113	51820113	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	18	51820113	51820113	G	T	SNP	POLI	ENST00000579534	human	ensembl	74_37	+1	known	missense	c.1499	p.R500M	0.565	NULL	pfam_DNA_repair_prot_UmuC-like,pfam_DNA_pol_Y-fam_little_finger,superfamily_DNA_pol_Y-fam_little_finger,pfscan_DNA_repair_prot_UmuC-like_N	-	no_errors	POLI	HGNC	ENSG00000101751				39	0	0.00	19	2	9.52
POT1	0	genome.wustl.edu	37	7	124503636	124503636	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	124503636	124503636	G	A	SNP	POT1	ENST00000357628	human	ensembl	74_37	-1	known	missense	c.314	p.T105M	1.000	pfam_Telomer_end-bd_POT1/Cdc13,superfamily_NA-bd_OB-fold,smart_Telomer_end-bd_POT1/Cdc13	pfam_Telomer_end-bd_POT1/Cdc13,superfamily_NA-bd_OB-fold,smart_Telomer_end-bd_POT1/Cdc13	-	no_errors	POT1	HGNC	ENSG00000128513				25	0	0.00	28	2	6.67
POU5F1B	0	genome.wustl.edu	37	8	128428446	128428446	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	128428446	128428446	C	T	SNP	POU5F1B	ENST00000391675	human	ensembl	74_37	+1	known	missense	c.335	p.P112L	0.094	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU5F1B	HGNC	ENSG00000212993	tier1	-	-	113	0	0.00	73	44	37.61
PPFIA2	0	genome.wustl.edu	37	12	81741361	81741361	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	12	81741361	81741361	G	A	SNP	PPFIA2	ENST00000549396	human	ensembl	74_37	-1	known	missense	c.2183	p.T728I	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA2	HGNC	ENSG00000139220	tier1	-	-	74	0	0.00	43	5	10.42
PPP1R12B	0	genome.wustl.edu	37	1	202407189	202407190	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	202407189	202407190	-	T	INS	PPP1R12B	ENST00000480184	human	ensembl	74_37	+1	novel	frame_shift_ins	c.1495_1496	p.F503fs	0.085:0.041	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PPP1R12B	HGNC	ENSG00000077157	tier1			31	0	0.00	30	5	14.29
PPP1R14C	0	genome.wustl.edu	37	6	150569908	150569908	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	150569908	150569908	G	A	SNP	PPP1R14C	ENST00000361131	human	ensembl	74_37	+1	known	silent	c.450	p.R150	1.000	pfam_PP1_inhibitor,superfamily_PP1_inhibitor	pfam_PP1_inhibitor,superfamily_PP1_inhibitor	-	no_errors	PPP1R14C	HGNC	ENSG00000198729	tier1	-	-	98	0	0.00	50	39	43.82
PPP2R5C	0	genome.wustl.edu	37	14	102378766	102378766	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	14	102378766	102378766	G	A	SNP	PPP2R5C	ENST00000422945	human	ensembl	74_37	+1	known	missense	c.1375	p.E459K	1.000	pfam_PP2A_B56,pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5C	HGNC	ENSG00000078304	tier1	-	-	50	0	0.00	19	14	42.42
PRG4	0	genome.wustl.edu	37	1	186277487	186277487	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	186277487	186277487	A	G	SNP	PRG4	ENST00000445192	human	ensembl	74_37	+1	known	missense	c.2636	p.E879G	0.003	NULL	pfam_Somatomedin_B_dom,pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Somatomedin_B_dom,smart_Hemopexin-like_repeat,prints_Somatomedin_B_chordata,pfscan_Somatomedin_B_dom	-	no_errors	PRG4	HGNC	ENSG00000116690	tier1	-	-	76	0	0.00	47	28	37.33
PRR5L	0	genome.wustl.edu	37	11	36440811	36440811	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	36440811	36440811	G	A	SNP	PRR5L	ENST00000378867	human	ensembl	74_37	+1	known	silent	c.252	p.L84	1.000	pfam_HbrB	pfam_HbrB	-	no_errors	PRR5L	HGNC	ENSG00000135362	tier1	-	-	91	0	0.00	62	4	6.06
PRSS8	0	genome.wustl.edu	37	16	31143758	31143758	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	31143758	31143758	C	T	SNP	PRSS8	ENST00000317508	human	ensembl	74_37	-1	known	missense	c.697	p.A233T	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS8	HGNC	ENSG00000052344	tier1	-	-	49	0	0.00	39	4	9.30
PTGER4	0	genome.wustl.edu	37	5	40681181	40681181	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	40681181	40681181	T	G	SNP	PTGER4	ENST00000302472	human	ensembl	74_37	+1	known	missense	c.86	p.I29S	1.000	pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_GPCR_Rhodpsn,prints_Prostglndn_DP_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Prost_EP4_rcpt,prints_Prostanoid_rcpt,prints_GPCR_Rhodpsn,prints_Prostglndn_DP_rcpt	-	no_errors	PTGER4	HGNC	ENSG00000171522	tier1	-	-	58	0	0.00	33	17	34.00
PTGER4	0	genome.wustl.edu	37	5	40681182	40681182	+	Silent	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	40681182	40681182	C	A	SNP	PTGER4	ENST00000302472	human	ensembl	74_37	+1	known	silent	c.87	p.I29	1.000	pfam_7TM_GPCR_serpentine_rcpt_Srx,prints_GPCR_Rhodpsn,prints_Prostglndn_DP_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Prost_EP4_rcpt,prints_Prostanoid_rcpt,prints_GPCR_Rhodpsn,prints_Prostglndn_DP_rcpt	-	no_errors	PTGER4	HGNC	ENSG00000171522	tier1	-	-	57	0	0.00	33	17	34.00
PTPRVP	0	genome.wustl.edu	37	1	202158378	202158378	+	RNA	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	202158378	202158378	A	T	SNP	PTPRVP	ENST00000482597	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.958	-	-	-	no_errors	PTPRVP	HGNC	ENSG00000243323	tier1	-	-	71	0	0.00	54	4	6.90
RALGDS	0	genome.wustl.edu	37	9	135975619	135975619	+	RNA	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	135975619	135975619	C	T	SNP	RALGDS	ENST00000469972	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RALGDS	HGNC	ENSG00000160271	tier1	-	-	66	0	0.00	20	20	50.00
RAP2A	0	genome.wustl.edu	37	13	98116495	98116495	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	13	98116495	98116495	A	T	SNP	RAP2A	ENST00000245304	human	ensembl	74_37	+1	known	missense	c.351	p.K117N	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAP2A	HGNC	ENSG00000125249	tier1	-	-	23	0	0.00	15	6	28.57
RASGRF2	0	genome.wustl.edu	37	5	80366374	80366374	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	80366374	80366374	G	C	SNP	RASGRF2	ENST00000265080	human	ensembl	74_37	+1	known	missense	c.607	p.D203H	1.000	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_Ras_GEF_dom,superfamily_DH-domain,smart_Pleckstrin_homology,smart_DH-domain,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RASGRF2	HGNC	ENSG00000113319	tier1	-	-	61	0	0.00	30	6	16.67
RBM28	0	genome.wustl.edu	37	7	127958055	127958055	+	Silent	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	127958055	127958055	G	T	SNP	RBM28	ENST00000223073	human	ensembl	74_37	-1	known	silent	c.1668	p.A556	1.000	smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM28	HGNC	ENSG00000106344	tier1	-	-	50	0	0.00	33	4	10.81
RFC1	0	genome.wustl.edu	37	4	39329211	39329211	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	4	39329211	39329211	A	G	SNP	RFC1	ENST00000381897	human	ensembl	74_37	-1	known	missense	c.497	p.L166P	1.000	superfamily_P-loop_NTPase,pirsf_DNA_replication_fac_C_lsu	pfam_DNA_replication_fac_RFC1_C,pfam_BRCT_dom,pfam_ATPase_AAA_core,superfamily_DNA_pol3_clamp-load_cplx_C,superfamily_P-loop_NTPase,superfamily_BRCT_dom,smart_BRCT_dom,smart_AAA+_ATPase,pirsf_DNA_replication_fac_C_lsu,pfscan_BRCT_dom	-	no_errors	RFC1	HGNC	ENSG00000035928	tier1	-	-	98	0	0.00	55	19	25.68
RHAG	0	genome.wustl.edu	37	6	49573531	49573531	+	Nonsense_Mutation	SNP	T	T	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	49573531	49573531	T	A	SNP	RHAG	ENST00000371175	human	ensembl	74_37	-1	known	nonsense	c.1225	p.R409*	0.004	NULL	pfam_NH4_transpt_AmtB-like_dom,superfamily_NH4_transpt_AmtB-like_dom,prints_RhesusRHD	-	no_errors	RHAG	HGNC	ENSG00000112077	tier1	-	-	53	0	0.00	54	4	6.90
RMDN2	0	genome.wustl.edu	37	2	38201326	38201326	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	38201326	38201326	G	T	SNP	RMDN2	ENST00000234195	human	ensembl	74_37	+1	known	missense	c.1130	p.S377I	1.000	NULL	NULL	-	no_errors	RMDN2	HGNC	ENSG00000115841	tier1	-	-	45	0	0.00	42	4	8.70
RN7SKP173	0	genome.wustl.edu	37	20	37390255	37390256	+	RNA	INS	-	-	TC			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	20	37390255	37390256	-	TC	INS	RN7SKP173	ENST00000362821	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.580:0.606	-	-	-	no_errors	RN7SKP173	HGNC	ENSG00000199691	tier1			9	0	0.00	5	5	50.00
RNF6	0	genome.wustl.edu	37	13	26789577	26789577	+	Silent	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	13	26789577	26789577	G	T	SNP	RNF6	ENST00000346166	human	ensembl	74_37	-1	known	silent	c.442	p.R148	0.999	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF6	HGNC	ENSG00000127870				77	0	0.00	36	2	5.26
ROBO2	0	genome.wustl.edu	37	3	77629225	77629225	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	77629225	77629225	G	A	SNP	ROBO2	ENST00000461745	human	ensembl	74_37	+1	known	missense	c.2456	p.S819N	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO2	HGNC	ENSG00000185008				31	0	0.00	37	2	5.13
RP2	0	genome.wustl.edu	37	X	46713468	46713468	+	Silent	SNP	T	T	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	X	46713468	46713468	T	A	SNP	RP2	ENST00000218340	human	ensembl	74_37	+1	known	silent	c.660	p.I220	0.419	pirsf_Protein_XRP2	pfam_Tubulin-bd_cofactor_C_dom,superfamily_Nucleoside_diP_kinase,superfamily_Adenylate_cyclase-assoc_CAP_C,smart_CARP_motif,pirsf_Protein_XRP2	-	no_errors	RP2	HGNC	ENSG00000102218	tier1	-	-	21	0	0.00	22	9	29.03
RPL32P3	0	genome.wustl.edu	37	3	129111880	129111880	+	RNA	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	129111880	129111880	A	T	SNP	RPL32P3	ENST00000514355	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.030	-	-	-	no_errors	RPL32P3	HGNC	ENSG00000251474	tier1	-	-	12	0	0.00	14	10	41.67
RUFY3	0	genome.wustl.edu	37	4	71650542	71650542	+	Silent	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	4	71650542	71650542	G	C	SNP	RUFY3	ENST00000417478	human	ensembl	74_37	+1	known	silent	c.1197	p.G399	0.971	NULL	pfam_Run,superfamily_Prefoldin,smart_Run,pfscan_Run	-	no_errors	RUFY3	HGNC	ENSG00000018189	tier1	-	-	35	0	0.00	21	10	32.26
RUFY3	0	genome.wustl.edu	37	4	71650543	71650543	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	4	71650543	71650543	C	T	SNP	RUFY3	ENST00000417478	human	ensembl	74_37	+1	known	nonsense	c.1198	p.Q400*	1.000	NULL	pfam_Run,superfamily_Prefoldin,smart_Run,pfscan_Run	-	no_errors	RUFY3	HGNC	ENSG00000018189	tier1	-	-	34	0	0.00	21	10	32.26
RXFP2	0	genome.wustl.edu	37	13	32376333	32376333	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	13	32376333	32376333	T	A	SNP	RXFP2	ENST00000298386	human	ensembl	74_37	+1	known	missense	c.2056	p.L686M	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_Leu-rich_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Leu-rich_rpt_typical-subtyp,pfscan_LDrepeatLR_classA_rpt,pfscan_GPCR_Rhodpsn_7TM,prints_Relaxin_rcpt,prints_GPCR_Rhodpsn,prints_Gphrmn_rcpt_fam	-	no_errors	RXFP2	HGNC	ENSG00000133105	tier1	-	-	71	0	0.00	37	4	9.76
S100A2	0	genome.wustl.edu	37	1	153535934	153535934	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	153535934	153535934	T	C	SNP	S100A2	ENST00000368707	human	ensembl	74_37	-1	putative	missense	c.220	p.S74G	0.980	NULL	pfam_S100_Ca-bd_sub	-	no_errors	S100A2	HGNC	ENSG00000196754	tier1	-	-	66	0	0.00	35	14	28.57
SALL2	0	genome.wustl.edu	37	14	21990864	21990864	+	Silent	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	14	21990864	21990864	G	T	SNP	SALL2	ENST00000327430	human	ensembl	74_37	-1	known	silent	c.2998	p.R1000	0.545	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL2	HGNC	ENSG00000165821				47	0	0.00	53	3	5.36
SCCPDH	0	genome.wustl.edu	37	1	246921571	246921571	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	246921571	246921571	G	T	SNP	SCCPDH	ENST00000366510	human	ensembl	74_37	+1	known	missense	c.608	p.G203V	1.000	pfam_Saccharopine_DH/HSpermid_syn	pfam_Saccharopine_DH/HSpermid_syn	-	no_errors	SCCPDH	HGNC	ENSG00000143653	tier1	-	-	72	0	0.00	57	4	6.56
SCG2	0	genome.wustl.edu	37	2	224462806	224462806	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	224462806	224462806	A	C	SNP	SCG2	ENST00000305409	human	ensembl	74_37	-1	known	missense	c.1195	p.L399V	0.001	pfam_Granin	pfam_Granin	-	no_errors	SCG2	HGNC	ENSG00000171951	tier1	-	-	52	0	0.00	30	8	20.51
SEC16A	0	genome.wustl.edu	37	9	139350129	139350129	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	139350129	139350129	C	T	SNP	SEC16A	ENST00000313050	human	ensembl	74_37	-1	known	silent	c.5781	p.G1927	0.000	NULL	NULL	-	no_errors	SEC16A	HGNC	ENSG00000148396	tier1	-	-	106	0	0.00	76	43	36.13
SEC16A	0	genome.wustl.edu	37	9	139354317	139354317	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	139354317	139354317	C	T	SNP	SEC16A	ENST00000313050	human	ensembl	74_37	-1	known	missense	c.5083	p.D1695N	1.000	NULL	NULL	-	no_errors	SEC16A	HGNC	ENSG00000148396	tier1	-	-	31	0	0.00	27	10	27.03
SEC61A1	0	genome.wustl.edu	37	3	127788799	127788799	+	RNA	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	127788799	127788799	C	G	SNP	SEC61A1	ENST00000483956	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.095	-	-	-	no_errors	SEC61A1	HGNC	ENSG00000058262	tier1	-	-	42	0	0.00	29	4	12.12
SEL1L2	0	genome.wustl.edu	37	20	13894224	13894224	+	RNA	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	20	13894224	13894224	T	G	SNP	SEL1L2	ENST00000476952	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SEL1L2	HGNC	ENSG00000101251	tier1	-	-	11	0	0.00	14	4	22.22
SEMA4C	0	genome.wustl.edu	37	2	97531628	97531628	+	Silent	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	97531628	97531628	A	G	SNP	SEMA4C	ENST00000305476	human	ensembl	74_37	-1	known	silent	c.297	p.C99	0.292	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA4C	HGNC	ENSG00000168758	tier1	-	-	25	0	0.00	28	15	34.88
SERTAD4	0	genome.wustl.edu	37	1	210415432	210415432	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	210415432	210415432	G	A	SNP	SERTAD4	ENST00000367012	human	ensembl	74_37	+1	known	missense	c.821	p.G274D	0.853	NULL	pfam_SERTA,pfscan_SERTA	-	no_errors	SERTAD4	HGNC	ENSG00000082497	tier1	-	-	37	0	0.00	22	7	24.14
SET	0	genome.wustl.edu	37	9	131455942	131455942	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	131455942	131455942	C	T	SNP	SET	ENST00000372692	human	ensembl	74_37	+1	known	missense	c.557	p.T186M	1.000	pfam_NAP_family	pfam_NAP_family	-	no_errors	SET	HGNC	ENSG00000119335	tier1	rs150832256	-	29	0	0.00	9	7	43.75
SGOL2	0	genome.wustl.edu	37	2	201436414	201436414	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	201436414	201436414	G	A	SNP	SGOL2	ENST00000357799	human	ensembl	74_37	+1	known	missense	c.1345	p.G449S	0.000	NULL	NULL	-	no_errors	SGOL2	HGNC	ENSG00000163535				27	0	0.00	31	2	6.06
SH3KBP1	0	genome.wustl.edu	37	X	19713154	19713154	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	X	19713154	19713154	G	A	SNP	SH3KBP1	ENST00000379697	human	ensembl	74_37	-1	known	missense	c.536	p.P179L	1.000	superfamily_SH3_domain	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_p67phox,prints_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SH3KBP1	HGNC	ENSG00000147010	tier1	-	-	18	0	0.00	13	15	53.57
SHANK3	0	genome.wustl.edu	37	22	51135697	51135698	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	22	51135697	51135698	0	G	INS	SHANK3	ENST00000262795	human	ensembl	74_37	+1	known	frame_shift_ins	c.1331_1332	p.A447fs	0.000:0.002	NULL	pfam_SAM_type1,pfam_Ankyrin_rpt,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK3	HGNC	ENSG00000251322				15	0	0.00	4	2	33.33
SHISA6	0	genome.wustl.edu	37	17	11461312	11461312	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	11461312	11461312	G	A	SNP	SHISA6	ENST00000441885	human	ensembl	74_37	+1	known	silent	c.1347	p.T449	0.131	NULL	NULL	-	no_errors	SHISA6	HGNC	ENSG00000188803				33	0	0.00	18	2	10.00
SIK2	0	genome.wustl.edu	37	11	111593398	111593398	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	111593398	111593398	C	G	SNP	SIK2	ENST00000304987	human	ensembl	74_37	+1	known	missense	c.2065	p.L689V	1.000	pirsf_Ser/Thr_kinase_SIK1/2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_SIK1/2,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	SIK2	HGNC	ENSG00000170145	tier1	-	-	27	0	0.00	13	10	43.48
SLC30A10	0	genome.wustl.edu	37	1	220089150	220089150	+	Silent	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	220089150	220089150	G	T	SNP	SLC30A10	ENST00000366926	human	ensembl	74_37	-1	known	silent	c.1099	p.R367	1.000	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A10	HGNC	ENSG00000196660	tier1	-	-	76	0	0.00	66	4	5.71
SLC30A10	0	genome.wustl.edu	37	1	220091715	220091715	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	220091715	220091715	G	T	SNP	SLC30A10	ENST00000366926	human	ensembl	74_37	-1	known	missense	c.840	p.D280E	1.000	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A10	HGNC	ENSG00000196660	tier1	-	-	58	0	0.00	75	5	6.25
SLC35G3	0	genome.wustl.edu	37	17	33521184	33521184	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	33521184	33521184	C	T	SNP	SLC35G3	ENST00000297307	human	ensembl	74_37	-1	known	missense	c.143	p.G48D	0.997	NULL	pfam_DMT	-	no_errors	SLC35G3	HGNC	ENSG00000164729				114	0	0.00	60	4	6.25
SLC7A7	0	genome.wustl.edu	37	14	23243154	23243154	+	Silent	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	14	23243154	23243154	G	T	SNP	SLC7A7	ENST00000285850	human	ensembl	74_37	-1	known	silent	c.1417	p.R473	1.000	pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A7	HGNC	ENSG00000155465	tier1	-	-	43	0	0.00	27	3	10.00
SLC9A3R1	0	genome.wustl.edu	37	17	72764629	72764629	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	72764629	72764629	C	G	SNP	SLC9A3R1	ENST00000262613	human	ensembl	74_37	+1	known	missense	c.911	p.P304R	0.998	pirsf_NaH_exchngr_reg_CF_NHE-RF	pfam_PDZ,pfam_EBP50_C-term,superfamily_PDZ,smart_PDZ,pirsf_NaH_exchngr_reg_CF_NHE-RF,pfscan_PDZ	-	no_errors	SLC9A3R1	HGNC	ENSG00000109062	tier1	-	-	73	0	0.00	25	46	64.79
SLU7	0	genome.wustl.edu	37	5	159834513	159834513	+	Silent	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	159834513	159834513	T	C	SNP	SLU7	ENST00000297151	human	ensembl	74_37	-1	known	silent	c.1095	p.K365	0.999	pfam_Slu7	pfam_Slu7,superfamily_Znf_CCHC	-	no_errors	SLU7	HGNC	ENSG00000164609	tier1	-	-	50	0	0.00	31	17	35.42
SMARCD1	0	genome.wustl.edu	37	12	50488347	50488347	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	12	50488347	50488347	G	C	SNP	SMARCD1	ENST00000394963	human	ensembl	74_37	+1	known	missense	c.1261	p.D421H	1.000	NULL	pfam_SWIB_MDM2_domain,superfamily_SWIB_MDM2_domain,smart_SWIB_domain	-	no_errors	SMARCD1	HGNC	ENSG00000066117	tier1	-	-	60	0	0.00	25	16	39.02
SMNDC1	0	genome.wustl.edu	37	10	112057441	112057441	+	Silent	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	10	112057441	112057441	G	C	SNP	SMNDC1	ENST00000369603	human	ensembl	74_37	-1	known	silent	c.309	p.T103	0.956	pfam_Survival_motor_neuron,smart_Tudor,pfscan_Tudor	pfam_Survival_motor_neuron,smart_Tudor,pfscan_Tudor	-	no_errors	SMNDC1	HGNC	ENSG00000119953	tier1	-	-	71	0	0.00	37	26	40.62
SMOC1	0	genome.wustl.edu	37	14	70477509	70477509	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	14	70477509	70477509	C	T	SNP	SMOC1	ENST00000361956	human	ensembl	74_37	+1	known	silent	c.703	p.L235	1.000	pfam_Thyroglobulin_1,superfamily_Thyroglobulin_1,pfscan_Thyroglobulin_1	pfam_Thyroglobulin_1,pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SMOC1	HGNC	ENSG00000198732	tier1	-	-	56	0	0.00	18	21	53.85
SNX6	0	genome.wustl.edu	37	14	35074923	35074923	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	14	35074923	35074923	T	C	SNP	SNX6	ENST00000362031	human	ensembl	74_37	-1	known	missense	c.307	p.I103V	1.000	pfam_Phox,superfamily_Phox,pirsf_Snx5_Snx6,pfscan_Phox	pfam_Phox,pfam_Vps5_C,pfam_BAR_dom,superfamily_Phox,pirsf_Snx5_Snx6,pfscan_Phox	-	no_errors	SNX6	HGNC	ENSG00000129515	tier1	-	-	83	0	0.00	55	23	29.49
SPAG17	0	genome.wustl.edu	37	1	118583397	118583397	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	118583397	118583397	G	A	SNP	SPAG17	ENST00000336338	human	ensembl	74_37	-1	known	missense	c.3122	p.S1041F	0.998	NULL	NULL	-	no_errors	SPAG17	HGNC	ENSG00000155761	tier1	-	-	96	0	0.00	64	25	28.09
SPATA5L1	0	genome.wustl.edu	37	15	45713469	45713469	+	RNA	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	45713469	45713469	G	A	SNP	SPATA5L1	ENST00000533841	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.029	-	-	-	no_errors	SPATA5L1	HGNC	ENSG00000171763	tier1	-	-	28	0	0.00	17	15	46.88
SPP2	0	genome.wustl.edu	37	2	234959516	234959516	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	234959516	234959516	G	T	SNP	SPP2	ENST00000168148	human	ensembl	74_37	+1	known	splice_site	c.85+1	e1+1	1.000	-	-	-	no_errors	SPP2	HGNC	ENSG00000072080				71	0	0.00	47	3	6.00
SPTAN1	0	genome.wustl.edu	37	9	131353868	131353868	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	131353868	131353868	G	A	SNP	SPTAN1	ENST00000358161	human	ensembl	74_37	+1	known	missense	c.3119	p.G1040D	1.000	smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_EF_hand_dom,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3,prints_SH3_domain	-	no_errors	SPTAN1	HGNC	ENSG00000197694	tier1	-	-	56	0	0.00	40	4	8.89
SSPO	0	genome.wustl.edu	37	7	149511585	149511585	+	RNA	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	149511585	149511585	G	A	SNP	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.290	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1	-	-	30	0	0.00	4	8	66.67
ST13	0	genome.wustl.edu	37	22	41223099	41223099	+	Splice_Site	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	22	41223099	41223099	C	G	SNP	ST13	ENST00000216218	human	ensembl	74_37	-1	known	splice_site	c.981+1	e11+1	1.000	-	-	-	no_errors	ST13	HGNC	ENSG00000100380	tier1	-	-	120	0	0.00	22	35	61.40
STIM2	0	genome.wustl.edu	37	4	27010561	27010561	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	4	27010561	27010561	C	G	SNP	STIM2	ENST00000382009	human	ensembl	74_37	+1	known	missense	c.1711	p.P571A	1.000	NULL	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,pfscan_SAM	-	no_errors	STIM2	HGNC	ENSG00000109689	tier1	-	-	71	0	0.00	37	24	39.34
STX3	0	genome.wustl.edu	37	11	59523091	59523091	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	59523091	59523091	C	T	SNP	STX3	ENST00000337979	human	ensembl	74_37	+1	known	silent	c.13	p.L5	0.999	NULL	pfam_Syntaxin_N,pfam_T_SNARE_dom,superfamily_t-SNARE,smart_Syntaxin_N,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX3	HGNC	ENSG00000166900	tier1	-	-	38	0	0.00	24	10	29.41
SULF1	0	genome.wustl.edu	37	8	70570792	70570792	+	RNA	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	70570792	70570792	C	T	SNP	SULF1	ENST00000521946	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.977	-	-	-	no_errors	SULF1	HGNC	ENSG00000137573	tier1	-	-	43	0	0.00	25	11	30.56
SYNE2	0	genome.wustl.edu	37	14	64430706	64430706	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	14	64430706	64430706	T	A	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.978	p.F326L	0.025	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1	-	-	68	0	0.00	65	4	5.80
SYNE2	0	genome.wustl.edu	37	14	64519522	64519522	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	14	64519522	64519522	G	T	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.8891	p.R2964L	0.002	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654				24	0	0.00	25	2	7.41
SYT2	0	genome.wustl.edu	37	1	202574728	202574728	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	202574728	202574728	A	G	SNP	SYT2	ENST00000367267	human	ensembl	74_37	-1	known	missense	c.173	p.I58T	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT2	HGNC	ENSG00000143858	tier1	-	-	121	0	0.00	58	25	30.12
TAAR2	0	genome.wustl.edu	37	6	132938983	132938983	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	132938983	132938983	C	A	SNP	TAAR2	ENST00000367931	human	ensembl	74_37	-1	known	missense	c.362	p.S121I	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_TAAR_fam	-	no_errors	TAAR2	HGNC	ENSG00000146378				30	0	0.00	32	11	25.58
TAAR2	0	genome.wustl.edu	37	6	132938985	132938985	+	Silent	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	132938985	132938985	A	G	SNP	TAAR2	ENST00000367931	human	ensembl	74_37	-1	known	silent	c.360	p.Y120	0.848	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_TAAR_fam	-	no_errors	TAAR2	HGNC	ENSG00000146378				34	0	0.00	32	11	25.58
TAF10	0	genome.wustl.edu	37	11	6632975	6632975	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	6632975	6632975	C	-	DEL	TAF10	ENST00000299424	human	ensembl	74_37	-1	known	frame_shift_del	c.307	p.A103fs	1.000	pirsf_TFIID_30kDa	pfam_TFIID_30kDa,pirsf_TFIID_30kDa,prints_TFIID_30kDa	-	no_errors	TAF10	HGNC	ENSG00000166337	tier1			18	0	0.00	14	7	33.33
TBC1D9	0	genome.wustl.edu	37	4	141600856	141600856	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	4	141600856	141600856	A	T	SNP	TBC1D9	ENST00000442267	human	ensembl	74_37	-1	known	missense	c.502	p.Y168N	1.000	pfam_GRAM,smart_GRAM	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_EF_hand_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D9	HGNC	ENSG00000109436	tier1	-	-	67	0	0.00	20	14	41.18
TCAIM	0	genome.wustl.edu	37	3	44408948	44408948	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	44408948	44408948	G	C	SNP	TCAIM	ENST00000342649	human	ensembl	74_37	+1	known	missense	c.320	p.G107A	1.000	NULL	NULL	-	no_errors	TCAIM	HGNC	ENSG00000179152	tier1	-	-	69	0	0.00	65	27	29.35
TET2	0	genome.wustl.edu	37	4	106155823	106155823	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	4	106155823	106155823	G	C	SNP	TET2	ENST00000380013	human	ensembl	74_37	+1	known	missense	c.724	p.V242L	1.000	NULL	NULL	-	no_errors	TET2	HGNC	ENSG00000168769				44	0	0.00	31	2	6.06
TG	0	genome.wustl.edu	37	8	133935598	133935598	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	133935598	133935598	A	T	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	missense	c.4544	p.Q1515L	1.000	superfamily_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832	tier1	-	-	108	0	0.00	57	22	27.85
THBS2	0	genome.wustl.edu	37	6	169648555	169648555	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	169648555	169648555	C	T	SNP	THBS2	ENST00000366787	human	ensembl	74_37	-1	known	missense	c.566	p.R189Q	1.000	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS2	HGNC	ENSG00000186340				22	0	0.00	26	2	7.14
THSD7A	0	genome.wustl.edu	37	7	11676143	11676143	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	11676143	11676143	G	A	SNP	THSD7A	ENST00000423059	human	ensembl	74_37	-1	known	silent	c.636	p.S212	0.891	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7A	HGNC	ENSG00000005108				20	0	0.00	17	2	10.53
THSD7B	0	genome.wustl.edu	37	2	137872721	137872721	+	Silent	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	137872721	137872721	A	G	SNP	THSD7B	ENST00000272643	human	ensembl	74_37	+1	known	silent	c.1227	p.K409	1.000	superfamily_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229	tier1	-	-	82	0	0.00	18	26	59.09
TMEM107	0	genome.wustl.edu	37	17	8079571	8079571	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	8079571	8079571	A	T	SNP	TMEM107	ENST00000316425	human	ensembl	74_37	-1	known	missense	c.34	p.F12I	1.000	NULL	NULL	-	no_errors	TMEM107	HGNC	ENSG00000179029				34	0	0.00	28	2	6.67
TMEM202	0	genome.wustl.edu	37	15	72691089	72691089	+	Silent	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	72691089	72691089	C	G	SNP	TMEM202	ENST00000341689	human	ensembl	74_37	+1	known	silent	c.177	p.L59	1.000	NULL	NULL	-	no_errors	TMEM202	HGNC	ENSG00000187806	tier1	-	-	34	0	0.00	9	21	70.00
TMEM37	0	genome.wustl.edu	37	2	120194856	120194856	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	120194856	120194856	C	A	SNP	TMEM37	ENST00000306406	human	ensembl	74_37	+1	known	missense	c.413	p.S138Y	0.664	NULL	NULL	-	no_errors	TMEM37	HGNC	ENSG00000171227				95	0	0.00	55	3	5.17
TMEM8C	0	genome.wustl.edu	37	9	136385396	136385396	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	136385396	136385396	G	A	SNP	TMEM8C	ENST00000339996	human	ensembl	74_37	-1	known	silent	c.150	p.C50	0.763	pfam_DUF3522	pfam_DUF3522	-	no_errors	TMEM8C	HGNC	ENSG00000187616	tier1	-	-	33	0	0.00	18	3	14.29
TMIE	0	genome.wustl.edu	37	3	46751074	46751076	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	46751074	46751076	AAG	-	DEL	TMIE	ENST00000326431	human	ensembl	74_37	+1	known	in_frame_del	c.367_369	p.K126in_frame_del	0.074:0.151:0.294	NULL	NULL	-	no_errors	TMIE	HGNC	ENSG00000181585	tier1			46	0	0.00	25	3	10.71
TMPRSS3	0	genome.wustl.edu	37	21	43809063	43809063	+	Silent	SNP	T	T	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	21	43809063	43809063	T	C	SNP	TMPRSS3	ENST00000380399	human	ensembl	74_37	-1	known	silent	c.549	p.K183	0.186	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_Peptidase_S1,pfam_SRCR,pfam_Peptidase_S1A_nudel,pfam_LDrepeatLR_classA_rpt,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_LDrepeatLR_classA_rpt,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS3	HGNC	ENSG00000160183	tier1	-	-	40	0	0.00	74	10	11.90
TNC	0	genome.wustl.edu	37	9	117786271	117786271	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	117786271	117786271	C	A	SNP	TNC	ENST00000350763	human	ensembl	74_37	-1	known	missense	c.6476	p.G2159V	1.000	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNC	HGNC	ENSG00000041982	tier1	-	-	64	0	0.00	30	16	34.78
TNFAIP3	0	genome.wustl.edu	37	6	138192616	138192616	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	138192616	138192616	C	G	SNP	TNFAIP3	ENST00000237289	human	ensembl	74_37	+1	known	missense	c.252	p.N84K	1.000	NULL	pfam_Znf_A20,pfam_OTU,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	TNFAIP3	HGNC	ENSG00000118503	tier1	-	-	43	0	0.00	21	12	36.36
TNFRSF19	0	genome.wustl.edu	37	13	24190184	24190184	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	13	24190184	24190184	G	C	SNP	TNFRSF19	ENST00000382258	human	ensembl	74_37	+1	known	missense	c.359	p.G120A	1.000	NULL	smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_19	-	no_errors	TNFRSF19	HGNC	ENSG00000127863	tier1	-	-	52	0	0.00	9	14	60.87
TP53	0	genome.wustl.edu	37	17	7578412	7578412	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	17	7578412	7578412	A	C	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.518	p.V173G	0.995	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	42	0	0.00	8	24	75.00
TPRX2P	0	genome.wustl.edu	37	19	48364761	48364761	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	48364761	48364761	G	A	SNP	TPRX2P	ENST00000535362	human	ensembl	74_37	+1	known	missense	c.973	p.D325N	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	TPRX2P	HGNC	ENSG00000259009	tier1	-	-	45	0	0.00	28	11	28.21
TRHDE	0	genome.wustl.edu	37	12	72771817	72771817	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	12	72771817	72771817	G	A	SNP	TRHDE	ENST00000261180	human	ensembl	74_37	+1	known	missense	c.1096	p.G366R	1.000	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657	tier1	-	-	95	0	0.00	92	21	18.58
TRIM36	0	genome.wustl.edu	37	5	114469750	114469750	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	5	114469750	114469750	G	T	SNP	TRIM36	ENST00000282369	human	ensembl	74_37	-1	known	missense	c.1341	p.S447R	0.999	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Znf_B-box,pfam_Fibronectin_type3,pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM36	HGNC	ENSG00000152503	tier1	-	-	36	0	0.00	18	3	14.29
TSEN34	0	genome.wustl.edu	37	19	54695405	54695405	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	54695405	54695405	G	C	SNP	TSEN34	ENST00000429671	human	ensembl	74_37	+1	known	missense	c.190	p.G64R	0.996	pirsf_tRNA_splic_SEN34	pfam_tRNA_intron_Endonuc_cat-like,superfamily_tRNA_intron_Endonuc_cat-like,pirsf_tRNA_splic_SEN34,tigrfam_tRNA_splic	-	no_errors	TSEN34	HGNC	ENSG00000170892	tier1	-	-	19	0	0.00	11	12	52.17
TTC39B	0	genome.wustl.edu	37	9	15175077	15175077	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	9	15175077	15175077	G	A	SNP	TTC39B	ENST00000512701	human	ensembl	74_37	-1	known	missense	c.1898	p.A633V	0.998	smart_TPR_repeat	pfam_OMP_IML2_mit/TPR_39,smart_TPR_repeat	-	no_errors	TTC39B	HGNC	ENSG00000155158	tier1	-	-	41	0	0.00	17	27	61.36
TTLL5	0	genome.wustl.edu	37	14	76173979	76173979	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	14	76173979	76173979	C	T	SNP	TTLL5	ENST00000298832	human	ensembl	74_37	+1	known	silent	c.669	p.D223	0.907	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL5	HGNC	ENSG00000119685	tier1	-	-	40	0	0.00	7	10	58.82
TTN	0	genome.wustl.edu	37	2	179458716	179458716	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	179458716	179458716	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.50700	p.R16900	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	53	0	0.00	36	21	36.84
TTN	0	genome.wustl.edu	37	2	179545834	179545834	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	179545834	179545834	T	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.29580	p.K9860N	1.000	pfam_PPAK_motif,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	73	0	0.00	49	16	24.62
TUBA3C	0	genome.wustl.edu	37	13	19751406	19751406	+	Silent	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	13	19751406	19751406	C	T	SNP	TUBA3C	ENST00000400113	human	ensembl	74_37	-1	known	silent	c.717	p.T239	0.989	superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3C	HGNC	ENSG00000198033	tier1	-	-	148	0	0.00	111	46	29.30
TWIST2	0	genome.wustl.edu	37	2	239757202	239757202	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	239757202	239757202	T	G	SNP	TWIST2	ENST00000448943	human	ensembl	74_37	+1	known	missense	c.346	p.F116V	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TWIST2	HGNC	ENSG00000233608				28	0	0.00	19	4	17.39
UBQLNL	0	genome.wustl.edu	37	11	5537601	5537601	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	5537601	5537601	T	A	SNP	UBQLNL	ENST00000380184	human	ensembl	74_37	-1	putative	missense	c.71	p.K24I	0.000	NULL	pfam_Ubiquitin_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLNL	HGNC	ENSG00000175518	tier1	-	-	47	0	0.00	28	11	28.21
UCA1	0	genome.wustl.edu	37	19	15940098	15940098	+	RNA	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	15940098	15940098	A	C	SNP	UCA1	ENST00000397381	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.022	-	-	-	no_errors	UCA1	HGNC	ENSG00000214049	tier1	-	-	53	0	0.00	26	28	51.85
USH2A	0	genome.wustl.edu	37	1	216462679	216462679	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	216462679	216462679	G	T	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	nonsense	c.1914	p.C638*	1.000	smart_EGF_laminin	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	65	0	0.00	69	4	5.48
USP17L2	0	genome.wustl.edu	37	8	11994772	11994772	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	11994772	11994772	C	T	SNP	USP17L2	ENST00000333796	human	ensembl	74_37	-1	known	missense	c.1498	p.V500M	0.000	NULL	pfam_Peptidase_C19/C67,pfam_HABP4_PAIRBP1-bd,pfscan_Peptidase_C19/C67	-	no_errors	USP17L2	HGNC	ENSG00000223443	tier1	rs199889083	-	122	0	0.00	33	63	65.62
USP31	0	genome.wustl.edu	37	16	23080011	23080011	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	23080011	23080011	T	A	SNP	USP31	ENST00000219689	human	ensembl	74_37	-1	known	missense	c.3415	p.R1139W	0.970	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP31	HGNC	ENSG00000103404				57	0	0.00	41	3	6.82
USP5	0	genome.wustl.edu	37	12	6968681	6968681	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	12	6968681	6968681	C	T	SNP	USP5	ENST00000229268	human	ensembl	74_37	+1	known	missense	c.1106	p.P369L	1.000	pfam_Peptidase_C19/C67,pirsf_Ubiquitinyl_hydrolase,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_UBA/Ts_N,pfam_Znf_UBP,superfamily_UBA-like,smart_Znf_UBP,smart_UBA/transl_elong_EF1B_N_euk,pirsf_Ubiquitinyl_hydrolase,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP5	HGNC	ENSG00000111667	tier1	-	-	61	0	0.00	47	4	7.84
USP53	0	genome.wustl.edu	37	4	120192515	120192515	+	Silent	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	4	120192515	120192515	A	G	SNP	USP53	ENST00000274030	human	ensembl	74_37	+1	known	silent	c.1500	p.K500	0.009	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP53	HGNC	ENSG00000145390	tier1	-	-	35	0	0.00	29	8	21.62
USP9Y	0	genome.wustl.edu	37	Y	14951885	14951885	+	Silent	SNP	A	A	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	Y	14951885	14951885	A	C	SNP	USP9Y	ENST00000338981	human	ensembl	74_37	+1	known	silent	c.5433	p.A1811	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,superfamily_Glycoside_hydrolase_SF,pfscan_Peptidase_C19/C67	-	no_errors	USP9Y	HGNC	ENSG00000114374	tier1	-	-	75	0	0.00	45	4	8.16
UTP20	0	genome.wustl.edu	37	12	101777368	101777368	+	Silent	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	12	101777368	101777368	G	C	SNP	UTP20	ENST00000261637	human	ensembl	74_37	+1	known	silent	c.7977	p.G2659	0.000	NULL	pfam_DRIM,superfamily_ARM-type_fold	-	no_errors	UTP20	HGNC	ENSG00000120800	tier1	-	-	54	0	0.00	16	26	61.90
UTY	0	genome.wustl.edu	37	Y	15582100	15582100	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	Y	15582100	15582100	A	T	SNP	UTY	ENST00000382896	human	ensembl	74_37	-1	known	missense	c.226	p.C76S	1.000	NULL	pfam_JmjC_dom,pfam_TPR_1,smart_TPR_repeat,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	UTY	HGNC	ENSG00000183878	tier1	-	-	36	0	0.00	1	18	94.74
VASN	0	genome.wustl.edu	37	16	4432883	4432883	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	4432883	4432883	G	A	SNP	VASN	ENST00000304735	human	ensembl	74_37	+1	known	missense	c.2005	p.A669T	0.000	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	VASN	HGNC	ENSG00000168140	tier1	-	-	76	0	0.00	54	4	6.90
VPS18	0	genome.wustl.edu	37	15	41195198	41195198	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	41195198	41195198	C	A	SNP	VPS18	ENST00000220509	human	ensembl	74_37	+1	known	missense	c.2581	p.L861I	1.000	NULL	pfam_Pep3_Vps18,pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold	-	no_errors	VPS18	HGNC	ENSG00000104142	tier1	-	-	81	0	0.00	63	4	5.97
VPS51	0	genome.wustl.edu	37	11	64876183	64876183	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	11	64876183	64876183	C	G	SNP	VPS51	ENST00000279281	human	ensembl	74_37	+1	known	missense	c.1240	p.L414V	1.000	NULL	pfam_COG8,pfam_Vacuolar_sorting-assoc_54,pfam_COG_su2_N,pfam_RZZ-complex_Zw10,superfamily_Cullin_repeat-like_dom	-	no_errors	VPS51	HGNC	ENSG00000149823	tier1	-	-	15	0	0.00	17	6	26.09
VSTM2A	0	genome.wustl.edu	37	7	54617774	54617774	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	54617774	54617774	G	A	SNP	VSTM2A	ENST00000402026	human	ensembl	74_37	+1	known	missense	c.542	p.S181N	1.000	NULL	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	VSTM2A	HGNC	ENSG00000170419	tier1	-	-	64	0	0.00	40	4	9.09
VTA1	0	genome.wustl.edu	37	6	142539707	142539707	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	142539707	142539707	A	G	SNP	VTA1	ENST00000367630	human	ensembl	74_37	+1	known	missense	c.851	p.Q284R	1.000	NULL	NULL	-	no_errors	VTA1	HGNC	ENSG00000009844	tier1	-	-	58	0	0.00	76	4	5.00
WASH3P	0	genome.wustl.edu	37	15	102513202	102513202	+	RNA	DEL	C	C	-			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	15	102513202	102513202	C	0	DEL	WASH3P	ENST00000354296	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	WASH3P	HGNC	ENSG00000185596				9	0	0.00	10	2	16.67
WDHD1	0	genome.wustl.edu	37	14	55434081	55434081	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	14	55434081	55434081	G	A	SNP	WDHD1	ENST00000360586	human	ensembl	74_37	-1	known	missense	c.2095	p.P699S	1.000	NULL	pfam_WD40_repeat,pfam_DUF3639,pfam_TIF_beta_prop-like,superfamily_WD40_repeat_dom,superfamily_HMG_box_dom,smart_WD40_repeat,smart_HMG_box_dom,pfscan_HMG_box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDHD1	HGNC	ENSG00000198554	tier1	-	-	58	0	0.00	34	21	38.18
WDR54	0	genome.wustl.edu	37	2	74649396	74649396	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	2	74649396	74649396	G	A	SNP	WDR54	ENST00000348227	human	ensembl	74_37	+1	known	missense	c.116	p.G39E	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR54	HGNC	ENSG00000005448	tier1	-	-	31	0	0.00	20	12	37.50
WWP1	0	genome.wustl.edu	37	8	87460711	87460711	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	8	87460711	87460711	G	T	SNP	WWP1	ENST00000265428	human	ensembl	74_37	+1	known	missense	c.2242	p.V748L	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	WWP1	HGNC	ENSG00000123124				34	0	0.00	32	2	5.88
XKR8	0	genome.wustl.edu	37	1	28293308	28293308	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	28293308	28293308	G	T	SNP	XKR8	ENST00000373884	human	ensembl	74_37	+1	known	missense	c.785	p.R262L	1.000	pfam_Transport_prot_XK	pfam_Transport_prot_XK	-	no_errors	XKR8	HGNC	ENSG00000158156	tier1	-	-	95	0	0.00	89	5	5.32
ZBTB21	0	genome.wustl.edu	37	21	43411988	43411988	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	21	43411988	43411988	G	T	SNP	ZBTB21	ENST00000310826	human	ensembl	74_37	-1	known	missense	c.2217	p.S739R	0.994	smart_Znf_C2H2-like	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB21	HGNC	ENSG00000173276	tier1	-	-	49	0	0.00	50	4	7.41
ZMYM4	0	genome.wustl.edu	37	1	35846959	35846960	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	35846959	35846960	-	A	INS	ZMYM4	ENST00000314607	human	ensembl	74_37	+1	known	frame_shift_ins	c.1281_1282	p.P430fs	0.987:1.000	NULL	pfam_DUF3504,pfam_Znf_MYM,smart_TRASH_dom	-	no_errors	ZMYM4	HGNC	ENSG00000146463	tier1			43	0	0.00	29	4	12.12
ZNF292	0	genome.wustl.edu	37	6	87967225	87967225	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	6	87967225	87967225	A	G	SNP	ZNF292	ENST00000369577	human	ensembl	74_37	+1	known	missense	c.3878	p.N1293S	0.972	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994	tier1	-	-	57	0	0.00	15	13	46.43
ZNF536	0	genome.wustl.edu	37	19	30936105	30936105	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	30936105	30936105	C	T	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	missense	c.1636	p.R546C	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597				44	0	0.00	28	2	6.67
ZNF660	0	genome.wustl.edu	37	3	44636561	44636561	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	3	44636561	44636561	C	A	SNP	ZNF660	ENST00000322734	human	ensembl	74_37	+1	known	missense	c.876	p.H292Q	0.999	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF660	HGNC	ENSG00000144792				39	0	0.00	40	3	6.98
ZNF670	0	genome.wustl.edu	37	1	247200821	247200821	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	247200821	247200821	C	G	SNP	ZNF670	ENST00000366503	human	ensembl	74_37	-1	known	missense	c.1100	p.C367S	0.696	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF670	HGNC	ENSG00000135747	tier1	-	-	100	0	0.00	54	22	28.95
ZNF720	0	genome.wustl.edu	37	16	31766026	31766026	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	16	31766026	31766026	G	C	SNP	ZNF720	ENST00000399681	human	ensembl	74_37	+1	known	missense	c.414	p.K138N	0.383	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF720	HGNC	ENSG00000197302	tier1	-	-	89	0	0.00	69	23	24.73
ZNF738	0	genome.wustl.edu	37	19	21558723	21558723	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	21558723	21558723	T	A	SNP	ZNF738	ENST00000597810	human	ensembl	74_37	+1	putative	missense	c.276	p.D92E	0.863	smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF738	HGNC	ENSG00000172687	tier1	-	-	88	0	0.00	62	25	28.74
ZNF837	0	genome.wustl.edu	37	19	58880489	58880489	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	19	58880489	58880489	C	G	SNP	ZNF837	ENST00000427624	human	ensembl	74_37	-1	known	missense	c.211	p.G71R	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF837	HGNC	ENSG00000152475	tier1	-	-	18	0	0.00	11	6	33.33
ZNF853	0	genome.wustl.edu	37	7	6662398	6662398	+	Silent	SNP	G	G	A			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	7	6662398	6662398	G	A	SNP	ZNF853	ENST00000457543	human	ensembl	74_37	+1	known	silent	c.1776	p.S592	0.995	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF853	HGNC	ENSG00000236609	tier1	-	-	46	0	0.00	45	17	27.42
ZSCAN20	0	genome.wustl.edu	37	1	33959192	33959192	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NI-01A-11D-A37C-09	TCGA-L5-A8NI-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	189b15ae-53a6-40c5-b334-157f0b896a3b	9125397b-fddd-47bb-b4c0-6c9007d878ce	1	33959192	33959192	T	G	SNP	ZSCAN20	ENST00000361328	human	ensembl	74_37	+1	known	missense	c.1850	p.L617W	0.000	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_SANT/Myb,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN20	HGNC	ENSG00000121903	tier1	-	-	21	0	0.00	14	4	22.22
