Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AARS2	0	genome.wustl.edu	37	6	44279178	44279178	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	44279178	44279178	T	G	SNP	AARS2	ENST00000244571	human	ensembl	74_37	-1	known	missense	c.530	p.K177T	0.033	pfam_Ala-tRNA-synth_IIc_N,pfscan_Ala-tRNA-synth_IIc_core,tigrfam_Ala-tRNA-lgiase_IIc	pfam_Ala-tRNA-synth_IIc_N,pfam_tRNA_SAD,superfamily_Ala-tRNA-ligase_IIc_anticod-bd,superfamily_Thr/Ala-tRNA-synth_IIc_edit,smart_tRNA_SAD,prints_Ala-tRNA-lgiase_IIc,pfscan_Ala-tRNA-synth_IIc_core,tigrfam_Ala-tRNA-lgiase_IIc	-	no_errors	AARS2	HGNC	ENSG00000124608	tier1	-	-	74	0	0.00	58	13	18.31
AASDH	0	genome.wustl.edu	37	4	57248651	57248652	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	57248651	57248652	-	T	INS	AASDH	ENST00000205214	human	ensembl	74_37	-1	known	frame_shift_ins	c.343_342	p.Q114fs	0.961:0.960	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig,pfam_Acyl_carrier_prot-like,superfamily_Quinonprotein_ADH-like_supfam,superfamily_Acyl_carrier_prot-like,smart_PQQ_beta_propeller_repeat,pfscan_Acyl_carrier_prot-like	-	no_errors	AASDH	HGNC	ENSG00000157426	tier1			36	0	0.00	37	21	36.21
ABCA10	0	genome.wustl.edu	37	17	67170425	67170425	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	67170425	67170425	A	-	DEL	ABCA10	ENST00000269081	human	ensembl	74_37	-1	known	frame_shift_del	c.3159	p.F1053fs	0.047	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA10	HGNC	ENSG00000154263	tier1			64	0	0.00	33	35	51.47
ABCA11P	0	genome.wustl.edu	37	4	419621	419621	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	419621	419621	C	T	SNP	ABCA11P	ENST00000451020	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.029	-	-	-	no_errors	ABCA11P	HGNC	ENSG00000251595	tier1	-	-	76	0	0.00	64	10	13.51
ABCA13	0	genome.wustl.edu	37	7	48392078	48392078	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	48392078	48392078	G	A	SNP	ABCA13	ENST00000435803	human	ensembl	74_37	+1	known	missense	c.10682	p.S3561N	0.993	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA13	HGNC	ENSG00000179869	tier1	-	-	50	0	0.00	37	8	17.78
ABCA3	0	genome.wustl.edu	37	16	2374411	2374411	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	2374411	2374411	C	T	SNP	ABCA3	ENST00000301732	human	ensembl	74_37	-1	known	silent	c.441	p.P147	0.612	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA3	HGNC	ENSG00000167972	tier1	-	-	29	0	0.00	15	4	21.05
ABCB10	0	genome.wustl.edu	37	1	229683352	229683352	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	229683352	229683352	A	G	SNP	ABCB10	ENST00000344517	human	ensembl	74_37	-1	known	missense	c.815	p.I272T	0.998	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB10	HGNC	ENSG00000135776				73	0	0.00	52	3	5.45
ABCB4	0	genome.wustl.edu	37	7	87074282	87074282	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	87074282	87074282	A	-	DEL	ABCB4	ENST00000265723	human	ensembl	74_37	-1	known	frame_shift_del	c.1015	p.S339fs	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB4	HGNC	ENSG00000005471	tier1			48	0	0.00	34	10	22.73
ABCC11	0	genome.wustl.edu	37	16	48264360	48264360	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	48264360	48264360	C	T	SNP	ABCC11	ENST00000356608	human	ensembl	74_37	-1	known	missense	c.224	p.R75H	0.941	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC11	HGNC	ENSG00000121270	tier1	rs148400454	-	76	0	0.00	47	20	29.85
ABCC4	0	genome.wustl.edu	37	13	95696013	95696013	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	95696013	95696013	G	A	SNP	ABCC4	ENST00000376887	human	ensembl	74_37	-1	known	missense	c.3658	p.R1220W	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM	-	no_errors	ABCC4	HGNC	ENSG00000125257	tier1	rs200017194	-	63	0	0.00	38	23	37.70
ABCC5	0	genome.wustl.edu	37	3	183665256	183665257	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	183665256	183665257	-	A	INS	ABCC5	ENST00000334444	human	ensembl	74_37	-1	known	frame_shift_ins	c.3270_3269	p.L1090fs	1.000:1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC5	HGNC	ENSG00000114770	tier1			31	0	0.00	21	6	22.22
ABCD1	0	genome.wustl.edu	37	X	153009046	153009046	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	153009046	153009046	C	T	SNP	ABCD1	ENST00000218104	human	ensembl	74_37	+1	known	silent	c.2095	p.L699	1.000	smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_Peroxi_TM,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_FA_transporter	-	no_errors	ABCD1	HGNC	ENSG00000101986	tier1	-	-	94	0	0.00	54	5	8.47
ABCD3	0	genome.wustl.edu	37	1	94982784	94982784	+	RNA	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	94982784	94982784	T	A	SNP	ABCD3	ENST00000464165	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.274	-	-	-	no_errors	ABCD3	HGNC	ENSG00000117528	tier1	-	-	28	0	0.00	27	6	18.18
ABCE1	0	genome.wustl.edu	37	4	146029243	146029243	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	146029243	146029243	C	T	SNP	ABCE1	ENST00000296577	human	ensembl	74_37	+1	known	missense	c.266	p.A89V	1.000	superfamily_P-loop_NTPase,pfscan_ABC_transporter-like,prints_ABC_E	pfam_ABC_transporter-like,pfam_RNaseL-inhib_metal-bd_dom,pfam_4Fe4S-bd_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,prints_ABC_E	-	no_errors	ABCE1	HGNC	ENSG00000164163	tier1	-	-	50	0	0.00	47	27	36.49
ABCG8	0	genome.wustl.edu	37	2	44101062	44101062	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	44101062	44101062	G	A	SNP	ABCG8	ENST00000272286	human	ensembl	74_37	+1	known	missense	c.1348	p.A450T	0.997	pfam_ABC_2_trans	pfam_ABC_2_trans,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,pfscan_ABC_transporter-like	-	no_errors	ABCG8	HGNC	ENSG00000143921	tier1	-	-	45	0	0.00	32	7	17.95
ABI3	0	genome.wustl.edu	37	17	47293972	47293972	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	47293972	47293972	G	A	SNP	ABI3	ENST00000225941	human	ensembl	74_37	+1	known	missense	c.197	p.G66D	1.000	NULL	pfam_Abl-interactor_HHR_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	ABI3	HGNC	ENSG00000108798	tier1	-	-	34	0	0.00	19	5	20.83
ACAA2	0	genome.wustl.edu	37	18	47329181	47329182	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	47329181	47329182	-	A	INS	ACAA2	ENST00000285093	human	ensembl	74_37	-1	known	frame_shift_ins	c.59_58	p.Y20fs	0.687:0.766	pfam_Thiolase_N,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	pfam_Thiolase_N,pfam_Thiolase_C,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	-	no_errors	ACAA2	HGNC	ENSG00000167315	tier1			51	0	0.00	21	9	30.00
ACACB	0	genome.wustl.edu	37	12	109634881	109634881	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	109634881	109634881	C	T	SNP	ACACB	ENST00000338432	human	ensembl	74_37	+1	known	silent	c.2550	p.H850	1.000	NULL	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACB	HGNC	ENSG00000076555	tier1	rs138898549	-	35	0	0.00	41	6	12.77
ACAD11	0	genome.wustl.edu	37	3	132363673	132363674	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	132363673	132363674	0	T	INS	ACAD11	ENST00000264990	human	ensembl	74_37	-1	known	frame_shift_ins	c.217_216	p.P72fs	1.000:0.997	pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom	pfam_Aminoglycoside_PTrfase,pfam_AcylCo_DH/oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,pfam_AcylCoA_DH/ox_N,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C,superfamily_Kinase-like_dom	-	no_errors	ACAD11	HGNC	ENSG00000240303				118	0	0.00	107	11	9.32
ACAP3	0	genome.wustl.edu	37	1	1229556	1229556	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	1229556	1229556	G	C	SNP	ACAP3	ENST00000353662	human	ensembl	74_37	-1	known	missense	c.1938	p.F646L	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_ArfGAP,pfam_Ankyrin_rpt,pfam_Pleckstrin_homology,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ACAP3	HGNC	ENSG00000131584	tier1	-	-	25	0	0.00	10	3	23.08
ACR	0	genome.wustl.edu	37	22	51183225	51183225	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	51183225	51183225	G	A	SNP	ACR	ENST00000216139	human	ensembl	74_37	+1	known	missense	c.856	p.A286T	0.996	pirsf_Pept_S1A_acrosin,superfamily_Trypsin-like_Pept_dom,pfscan_Peptidase_S1	pirsf_Pept_S1A_acrosin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	ACR	HGNC	ENSG00000100312	tier1	-	-	84	0	0.00	59	9	13.24
ACR	0	genome.wustl.edu	37	22	51183254	51183255	+	Frame_Shift_Del	DEL	TA	TA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	51183254	51183255	TA	-	DEL	ACR	ENST00000216139	human	ensembl	74_37	+1	known	frame_shift_del	c.885_886	p.M296fs	0.000:0.001	pirsf_Pept_S1A_acrosin	pirsf_Pept_S1A_acrosin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	ACR	HGNC	ENSG00000100312	tier1			76	0	0.00	60	14	18.92
ACSBG2	0	genome.wustl.edu	37	19	6147615	6147615	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	6147615	6147615	A	-	DEL	ACSBG2	ENST00000252669	human	ensembl	74_37	+1	known	frame_shift_del	c.226	p.K77fs	0.000	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSBG2	HGNC	ENSG00000130377	tier1			74	0	0.00	64	9	12.33
ACSL6	0	genome.wustl.edu	37	5	131321105	131321105	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	131321105	131321105	G	A	SNP	ACSL6	ENST00000296869	human	ensembl	74_37	-1	known	missense	c.911	p.T304M	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSL6	HGNC	ENSG00000164398	tier1	-	-	33	0	0.00	34	11	24.44
ACSS1	0	genome.wustl.edu	37	20	25038639	25038639	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	25038639	25038639	G	A	SNP	ACSS1	ENST00000323482	human	ensembl	74_37	-1	known	missense	c.100	p.P34S	0.000	NULL	pfam_AMP-dep_Synth/Lig,tigrfam_Ac_CoA_lig	-	no_errors	ACSS1	HGNC	ENSG00000154930	tier1	-	-	23	0	0.00	5	3	37.50
ACTA2	0	genome.wustl.edu	37	10	90701031	90701031	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	90701031	90701031	G	T	SNP	ACTA2	ENST00000224784	human	ensembl	74_37	-1	known	missense	c.571	p.L191I	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTA2	HGNC	ENSG00000107796	tier1	-	-	61	0	0.00	71	4	5.33
ACTBP12	0	genome.wustl.edu	37	1	92694219	92694219	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	92694219	92694219	G	T	SNP	ACTBP12	ENST00000594933	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.590	-	-	-	no_errors	ACTBP12	HGNC	ENSG00000233125	tier1	-	-	28	0	0.00	28	5	15.15
ACTL8	0	genome.wustl.edu	37	1	18152879	18152879	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	18152879	18152879	C	A	SNP	ACTL8	ENST00000375406	human	ensembl	74_37	+1	known	silent	c.966	p.S322	0.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL8	HGNC	ENSG00000117148	tier1	-	-	62	0	0.00	66	18	21.43
ACTN3	0	genome.wustl.edu	37	11	66314452	66314452	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	66314452	66314452	G	A	SNP	ACTN3	ENST00000511191	human	ensembl	74_37	+1	known	missense	c.44	p.G15E	0.911	NULL	NULL	-	no_errors	ACTN3	HGNC	ENSG00000248746	tier1	-	-	108	0	0.00	91	14	13.33
ACTN4	0	genome.wustl.edu	37	19	39208640	39208640	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	39208640	39208640	G	A	SNP	ACTN4	ENST00000252699	human	ensembl	74_37	+1	known	missense	c.1217	p.R406H	1.000	NULL	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	ACTN4	HGNC	ENSG00000130402	tier1	-	-	55	0	0.00	40	8	16.67
ACTR3B	0	genome.wustl.edu	37	7	152549324	152549324	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	152549324	152549324	C	T	SNP	ACTR3B	ENST00000256001	human	ensembl	74_37	+1	known	silent	c.1065	p.G355	0.114	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related	-	no_errors	ACTR3B	HGNC	ENSG00000133627	tier1	rs144915052	-	50	0	0.00	38	11	22.45
ACTR3B	0	genome.wustl.edu	37	7	152550626	152550626	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	152550626	152550626	C	T	SNP	ACTR3B	ENST00000256001	human	ensembl	74_37	+1	known	silent	c.1125	p.Y375	0.930	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related	-	no_errors	ACTR3B	HGNC	ENSG00000133627	tier1	-	-	27	0	0.00	20	6	23.08
ACTRT2	0	genome.wustl.edu	37	1	2939156	2939156	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	2939156	2939156	G	-	DEL	ACTRT2	ENST00000378404	human	ensembl	74_37	+1	known	frame_shift_del	c.906	p.G304fs	0.003	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTRT2	HGNC	ENSG00000169717	tier1			75	0	0.00	69	8	10.39
ACY1	0	genome.wustl.edu	37	3	52022810	52022810	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	52022810	52022810	C	T	SNP	ACY1	ENST00000458031	human	ensembl	74_37	+1	known	missense	c.1300	p.P434S	1.000	pfam_Peptidase_M20,tigrfam_N-acyl_aa_amidohydrolase	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer,tigrfam_N-acyl_aa_amidohydrolase	-	no_errors	ACY1	HGNC	ENSG00000243989	tier1	-	-	50	0	0.00	27	4	12.50
ADAD2	0	genome.wustl.edu	37	16	84228780	84228780	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	84228780	84228780	C	T	SNP	ADAD2	ENST00000268624	human	ensembl	74_37	+1	known	missense	c.929	p.A310V	0.970	smart_A_deamin	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADAD2	HGNC	ENSG00000140955	tier1	-	-	122	0	0.00	111	9	7.50
ADAM2	0	genome.wustl.edu	37	8	39603995	39603995	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	39603995	39603995	C	T	SNP	ADAM2	ENST00000265708	human	ensembl	74_37	-1	known	missense	c.2170	p.D724N	0.987	NULL	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM2	HGNC	ENSG00000104755	tier1	-	-	69	0	0.00	98	17	14.78
ADAM30	0	genome.wustl.edu	37	1	120437822	120437823	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	120437822	120437823	0	A	INS	ADAM30	ENST00000369400	human	ensembl	74_37	-1	known	frame_shift_ins	c.1138_1137	p.K379fs	0.000:0.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM30	HGNC	ENSG00000134249				54	0	0.00	53	6	10.17
ADAM3A	0	genome.wustl.edu	37	8	39313017	39313018	+	RNA	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	39313017	39313018	-	T	INS	ADAM3A	ENST00000460383	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	ADAM3A	HGNC	ENSG00000197475	tier1			36	0	0.00	19	8	29.63
ADAMTS2	0	genome.wustl.edu	37	5	178699931	178699931	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	178699931	178699931	C	-	DEL	ADAMTS2	ENST00000251582	human	ensembl	74_37	-1	known	frame_shift_del	c.669	p.P224fs	0.001	prints_Pept_M12B_ADAM-TS2	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS2,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS2	HGNC	ENSG00000087116	tier1			96	0	0.00	82	11	11.83
ADAMTS20	0	genome.wustl.edu	37	12	43817528	43817528	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	43817528	43817528	C	-	DEL	ADAMTS20	ENST00000553158	human	ensembl	74_37	-1	known	frame_shift_del	c.4484	p.G1495fs	0.000	NULL	pfam_Peptidase_M12B_N,pfam_Thrombospondin_1_rpt,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS20	HGNC	ENSG00000173157	tier1			61	0	0.00	37	9	19.57
ADAMTS9	0	genome.wustl.edu	37	3	64582642	64582642	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	64582642	64582642	G	T	SNP	ADAMTS9	ENST00000498707	human	ensembl	74_37	-1	known	missense	c.4043	p.S1348Y	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS9	HGNC	ENSG00000163638	tier1	-	-	31	0	0.00	35	6	14.63
ADC	0	genome.wustl.edu	37	1	33549639	33549639	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	33549639	33549639	C	T	SNP	ADC	ENST00000373441	human	ensembl	74_37	+1	known	missense	c.190	p.R64W	0.999	pfam_De-COase2_N	pfam_De-COase2_N,pfam_De-COase2_C,superfamily_Ala_racemase/Decarboxylase_C,prints_Orn_de-COase,prints_Orn/DAP/Arg_de-COase	-	no_errors	ADC	HGNC	ENSG00000142920	tier1	rs148628180	-	37	0	0.00	24	12	33.33
ADCK5	0	genome.wustl.edu	37	8	145616338	145616338	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	145616338	145616338	A	G	SNP	ADCK5	ENST00000308860	human	ensembl	74_37	+1	known	missense	c.548	p.D183G	0.999	superfamily_Kinase-like_dom	pfam_UbiB_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK5	HGNC	ENSG00000173137	tier1	-	-	44	0	0.00	46	5	9.80
ADCY2	0	genome.wustl.edu	37	5	7782358	7782358	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	7782358	7782358	A	G	SNP	ADCY2	ENST00000382531	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ADCY2	HGNC	ENSG00000078295	tier1	-	-	78	0	0.00	62	13	17.33
ADCY4	0	genome.wustl.edu	37	14	24795358	24795358	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	24795358	24795358	G	-	DEL	ADCY4	ENST00000310677	human	ensembl	74_37	-1	known	frame_shift_del	c.1582	p.R528fs	0.554	pfam_Adenylate_cyclase-like	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY4	HGNC	ENSG00000129467	tier1			31	0	0.00	19	8	29.63
ADCY8	0	genome.wustl.edu	37	8	132052482	132052482	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	132052482	132052482	G	A	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	missense	c.98	p.P33L	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897	tier1	-	-	20	0	0.00	14	5	26.32
ADCY8	0	genome.wustl.edu	37	8	132051742	132051742	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	132051742	132051742	C	T	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	missense	c.838	p.A280T	1.000	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897				36	0	0.00	43	5	10.42
ADCY9	0	genome.wustl.edu	37	16	4029160	4029160	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	4029160	4029160	G	T	SNP	ADCY9	ENST00000294016	human	ensembl	74_37	-1	known	missense	c.2636	p.A879D	0.934	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY9	HGNC	ENSG00000162104	tier1	-	-	61	0	0.00	65	4	5.80
ADD3	0	genome.wustl.edu	37	10	111884031	111884031	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	111884031	111884031	C	T	SNP	ADD3	ENST00000356080	human	ensembl	74_37	+1	known	missense	c.1400	p.T467M	1.000	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD3	HGNC	ENSG00000148700	tier1	-	-	39	0	0.00	32	6	15.79
ADD3	0	genome.wustl.edu	37	10	111893350	111893350	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	111893350	111893350	A	-	DEL	ADD3	ENST00000356080	human	ensembl	74_37	+1	known	frame_shift_del	c.2095	p.K701fs	1.000	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD3	HGNC	ENSG00000148700	tier1			37	0	0.00	15	19	55.88
ADH6	0	genome.wustl.edu	37	4	100131401	100131401	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	100131401	100131401	T	C	SNP	ADH6	ENST00000394899	human	ensembl	74_37	-1	known	silent	c.405	p.G135	0.802	pfam_ADH_GroES-like,superfamily_GroES-like,smart_PKS_ER	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like,smart_PKS_ER	-	no_errors	ADH6	HGNC	ENSG00000172955	tier1	-	-	78	0	0.00	61	4	6.06
ADORA1	0	genome.wustl.edu	37	1	203134456	203134456	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	203134456	203134456	G	A	SNP	ADORA1	ENST00000309502	human	ensembl	74_37	+1	known	missense	c.409	p.V137M	0.991	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Adenosn_rcpt,prints_GPCR_Rhodpsn,prints_Adeno_A1_rcpt	-	no_errors	ADORA1	HGNC	ENSG00000163485	tier1	-	-	60	0	0.00	52	22	29.73
ADRA2A	0	genome.wustl.edu	37	10	112837856	112837856	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	112837856	112837856	G	-	DEL	ADRA2A	ENST00000280155	human	ensembl	74_37	+1	known	frame_shift_del	c.102	p.G36fs	0.354	prints_ADRA2A_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRA2A_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam,prints_Musac_Ach_rcpt	-	no_errors	ADRA2A	HGNC	ENSG00000150594	tier1			27	0	0.00	15	8	34.78
ADRBK1	0	genome.wustl.edu	37	11	67051717	67051717	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	67051717	67051717	C	-	DEL	ADRBK1	ENST00000308595	human	ensembl	74_37	+1	known	frame_shift_del	c.1527	p.L511fs	1.000	superfamily_Kinase-like_dom,smart_AGC-kinase_C,prints_GPCR_kinase	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	ADRBK1	HGNC	ENSG00000173020	tier1			44	0	0.00	36	12	25.00
ADTRP	0	genome.wustl.edu	37	6	11778984	11778984	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	11778984	11778984	C	A	SNP	ADTRP	ENST00000379413	human	ensembl	74_37	-1	known	missense	c.9	p.K3N	0.000	NULL	pfam_Far-17a_AIG1	-	no_errors	ADTRP	HGNC	ENSG00000111863	tier1	-	-	27	0	0.00	27	14	34.15
AFAP1	0	genome.wustl.edu	37	4	7776485	7776485	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	7776485	7776485	C	T	SNP	AFAP1	ENST00000420658	human	ensembl	74_37	-1	known	silent	c.2043	p.A681	0.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	AFAP1	HGNC	ENSG00000196526	tier1	-	-	79	0	0.00	67	6	8.22
AFAP1L1	0	genome.wustl.edu	37	5	148712387	148712387	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	148712387	148712387	C	T	SNP	AFAP1L1	ENST00000296721	human	ensembl	74_37	+1	known	missense	c.2105	p.A702V	0.999	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	AFAP1L1	HGNC	ENSG00000157510	tier1	-	-	37	0	0.00	33	9	21.43
AFAP1L2	0	genome.wustl.edu	37	10	116054776	116054779	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	116054776	116054779	AAAA	-	DEL	AFAP1L2	ENST00000491814	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000:0.008	-	-	-	no_errors	AFAP1L2	HGNC	ENSG00000169129	tier1			101	0	0.00	71	4	5.33
AFF2	0	genome.wustl.edu	37	X	148069012	148069012	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	148069012	148069012	G	A	SNP	AFF2	ENST00000370460	human	ensembl	74_37	+1	known	missense	c.3739	p.V1247I	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF2	HGNC	ENSG00000155966	tier1	-	-	47	0	0.00	16	6	27.27
AFF3	0	genome.wustl.edu	37	2	100209760	100209760	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	100209760	100209760	A	G	SNP	AFF3	ENST00000356421	human	ensembl	74_37	-1	known	missense	c.2438	p.V813A	0.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF3	HGNC	ENSG00000144218				55	0	0.00	57	4	6.45
AFG3L2	0	genome.wustl.edu	37	18	12329672	12329672	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	12329672	12329672	G	A	SNP	AFG3L2	ENST00000269143	human	ensembl	74_37	-1	known	silent	c.2286	p.G762	1.000	NULL	pfam_Peptidase_M41,pfam_ATPase_AAA_core,pfam_Pept_M41_FtsH_extracell,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_FtsH	-	no_errors	AFG3L2	HGNC	ENSG00000141385	tier1	-	-	58	0	0.00	54	5	8.47
AGA	0	genome.wustl.edu	37	4	178355571	178355571	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	178355571	178355571	A	G	SNP	AGA	ENST00000264595	human	ensembl	74_37	-1	known	silent	c.771	p.T257	0.248	pfam_Peptidase_T2	pfam_Peptidase_T2	-	no_errors	AGA	HGNC	ENSG00000038002	tier1	-	-	42	0	0.00	49	17	25.76
AGBL3	0	genome.wustl.edu	37	7	134678279	134678280	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	134678279	134678280	AC	-	DEL	AGBL3	ENST00000458078	human	ensembl	74_37	+1	known	frame_shift_del	c.82_83	p.Q29fs	0.991:0.999	NULL	pfam_Peptidase_M14	-	no_errors	AGBL3	HGNC	ENSG00000146856	tier1			65	0	0.00	56	9	13.85
AGXT	0	genome.wustl.edu	37	2	241817492	241817492	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	241817492	241817492	G	T	SNP	AGXT	ENST00000307503	human	ensembl	74_37	+1	known	missense	c.996	p.W332C	1.000	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase	-	no_errors	AGXT	HGNC	ENSG00000172482	tier1	-	-	74	0	0.00	46	10	17.86
AHCTF1	0	genome.wustl.edu	37	1	247002901	247002901	+	RNA	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	247002901	247002901	T	G	SNP	AHCTF1	ENST00000470300	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	AHCTF1	HGNC	ENSG00000153207	tier1	-	-	26	0	0.00	26	4	13.33
AHNAK2	0	genome.wustl.edu	37	14	105420232	105420232	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	105420232	105420232	G	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	missense	c.1556	p.A519V	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	tier1	-	-	82	0	0.00	47	6	11.32
AICDA	0	genome.wustl.edu	37	12	8756903	8756903	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	8756903	8756903	C	T	SNP	AICDA	ENST00000229335	human	ensembl	74_37	-1	known	missense	c.574	p.A192T	1.000	NULL	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	AICDA	HGNC	ENSG00000111732	tier1	-	-	33	0	0.00	25	6	19.35
AICDA	0	genome.wustl.edu	37	12	8757882	8757882	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	8757882	8757882	C	T	SNP	AICDA	ENST00000229335	human	ensembl	74_37	-1	known	missense	c.356	p.R119H	0.082	superfamily_Cytidine_deaminase-like	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	AICDA	HGNC	ENSG00000111732	tier1	-	-	41	0	0.00	34	11	24.44
AIFM2	0	genome.wustl.edu	37	10	71880273	71880273	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	71880273	71880273	G	A	SNP	AIFM2	ENST00000307864	human	ensembl	74_37	-1	known	missense	c.497	p.P166L	0.988	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_OxRdtase_NAD-bd_dom	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_OxRdtase_NAD-bd_dom,prints_FAD_pyr_nucl-diS_OxRdtase,prints_Pyridine_nuc-diS_OxRdtase_2,prints_Rng_hydrolase-like	-	no_errors	AIFM2	HGNC	ENSG00000042286	tier1	-	-	43	0	0.00	44	5	10.20
AIM2	0	genome.wustl.edu	37	1	159032487	159032487	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	159032487	159032487	T	-	DEL	AIM2	ENST00000368130	human	ensembl	74_37	-1	known	frame_shift_del	c.1027	p.T343fs	0.001	NULL	pfam_HIN200/IF120x,pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_NA-bd_OB-fold,pfscan_DAPIN,pfscan_HIN200/IF120x	-	no_errors	AIM2	HGNC	ENSG00000163568	tier1			58	0	0.00	22	26	54.17
AK9	0	genome.wustl.edu	37	6	109830572	109830572	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	109830572	109830572	T	-	DEL	AK9	ENST00000424296	human	ensembl	74_37	-1	known	frame_shift_del	c.4291	p.I1431fs	0.005	pfam_Adenylate_kin,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Adenylate_kin,pfam_YHS_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	AK9	HGNC	ENSG00000155085	tier1			37	0	0.00	21	7	25.00
AK9	0	genome.wustl.edu	37	6	109906340	109906343	+	Frame_Shift_Del	DEL	TTCT	TTCT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TTCT	TTCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	109906340	109906343	TTCT	-	DEL	AK9	ENST00000424296	human	ensembl	74_37	-1	known	frame_shift_del	c.2100_2097	p.E700fs	0.824:0.825:0.777:0.437	superfamily_P-loop_NTPase	pfam_Adenylate_kin,pfam_YHS_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	AK9	HGNC	ENSG00000155085	tier1			88	0	0.00	63	9	12.50
AKAP13	0	genome.wustl.edu	37	15	86122542	86122542	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	86122542	86122542	C	A	SNP	AKAP13	ENST00000361243	human	ensembl	74_37	+1	known	missense	c.1243	p.L415I	0.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	AKAP13	HGNC	ENSG00000170776	tier1	-	-	30	0	0.00	33	10	23.26
AKAP13	0	genome.wustl.edu	37	15	86278265	86278265	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	86278265	86278265	C	T	SNP	AKAP13	ENST00000361243	human	ensembl	74_37	+1	known	missense	c.7337	p.T2446I	0.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	AKAP13	HGNC	ENSG00000170776	tier1	-	-	38	0	0.00	35	4	10.26
AKAP13	0	genome.wustl.edu	37	15	86284337	86284337	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	86284337	86284337	G	A	SNP	AKAP13	ENST00000361243	human	ensembl	74_37	+1	known	missense	c.7681	p.A2561T	0.824	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	AKAP13	HGNC	ENSG00000170776				69	0	0.00	47	5	9.62
AKAP6	0	genome.wustl.edu	37	14	33293133	33293133	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	33293133	33293133	T	C	SNP	AKAP6	ENST00000280979	human	ensembl	74_37	+1	known	silent	c.6114	p.C2038	1.000	NULL	smart_Spectrin/alpha-actinin	-	no_errors	AKAP6	HGNC	ENSG00000151320	tier1	-	-	25	0	0.00	23	5	17.86
AKAP7	0	genome.wustl.edu	37	6	131481276	131481276	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	131481276	131481276	A	-	DEL	AKAP7	ENST00000368123	human	ensembl	74_37	+1	known	frame_shift_del	c.163	p.K57fs	0.449	pfam_Kinase-A_anchor_nucl_local_sig	pfam_Kinase-A_anchor_nucl_local_sig,pfam_Kinase-A_anchor_RI-RII-bd_dom,superfamily_RNA_ligase/cNuc_Pdiesterase	-	no_errors	AKAP7	HGNC	ENSG00000118507	tier1			50	0	0.00	32	8	20.00
AKAP9	0	genome.wustl.edu	37	7	91603085	91603085	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	91603085	91603085	A	-	DEL	AKAP9	ENST00000359028	human	ensembl	74_37	+1	known	frame_shift_del	c.145	p.K51fs	1.000	NULL	pfam_PACT_domain,superfamily_Prefoldin,superfamily_YbaB	-	no_errors	AKAP9	HGNC	ENSG00000127914	tier1			34	0	0.00	23	6	20.69
AKIRIN2	0	genome.wustl.edu	37	6	88411208	88411208	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	88411208	88411208	C	A	SNP	AKIRIN2	ENST00000257787	human	ensembl	74_37	-1	known	missense	c.195	p.E65D	1.000	NULL	NULL	-	no_errors	AKIRIN2	HGNC	ENSG00000135334	tier1	-	-	12	0	0.00	9	6	40.00
ALCAM	0	genome.wustl.edu	37	3	105250904	105250904	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	105250904	105250904	A	-	DEL	ALCAM	ENST00000306107	human	ensembl	74_37	+1	known	frame_shift_del	c.453	p.K153fs	0.891	pfam_CD80_C2-set,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	ALCAM	HGNC	ENSG00000170017	tier1			43	0	0.00	24	9	27.27
ALDH16A1	0	genome.wustl.edu	37	19	49964929	49964929	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	49964929	49964929	G	A	SNP	ALDH16A1	ENST00000293350	human	ensembl	74_37	+1	known	missense	c.631	p.A211T	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH	-	no_errors	ALDH16A1	HGNC	ENSG00000161618	tier1	-	-	68	0	0.00	69	6	8.00
ALDH1B1	0	genome.wustl.edu	37	9	38396185	38396185	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	38396185	38396185	G	A	SNP	ALDH1B1	ENST00000377698	human	ensembl	74_37	+1	known	missense	c.440	p.R147Q	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1B1	HGNC	ENSG00000137124	tier1	-	-	27	0	0.00	12	7	36.84
ALDH2	0	genome.wustl.edu	37	12	112229927	112229927	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	112229927	112229927	G	-	DEL	ALDH2	ENST00000261733	human	ensembl	74_37	+1	known	frame_shift_del	c.858	p.K289fs	0.991	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH2	HGNC	ENSG00000111275	tier1			68	0	0.00	43	8	15.69
ALG11	0	genome.wustl.edu	37	13	52593151	52593152	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	52593151	52593152	-	A	INS	ALG11	ENST00000521508	human	ensembl	74_37	+1	known	frame_shift_ins	c.147_148	p.L51fs	1.000:1.000	NULL	pfam_Glyco_trans_1	-	no_errors	ALG11	HGNC	ENSG00000253710	tier1			74	0	0.00	65	9	12.16
ALG12	0	genome.wustl.edu	37	22	50297990	50297991	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	50297990	50297991	-	G	INS	ALG12	ENST00000330817	human	ensembl	74_37	-1	known	frame_shift_ins	c.1157_1156	p.Q386fs	0.074:0.002	NULL	pfam_GPI_mannosylTrfase	-	no_errors	ALG12	HGNC	ENSG00000182858	tier1			84	0	0.00	48	23	32.39
ALK	0	genome.wustl.edu	37	2	29445225	29445225	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	29445225	29445225	T	G	SNP	ALK	ENST00000389048	human	ensembl	74_37	-1	known	missense	c.3500	p.E1167A	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_MAM_dom,superfamily_Kinase-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_MAM_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ALK	HGNC	ENSG00000171094	tier1	-	-	42	0	0.00	32	9	21.95
ALMS1	0	genome.wustl.edu	37	2	73677340	73677340	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	73677340	73677340	C	T	SNP	ALMS1	ENST00000264448	human	ensembl	74_37	+1	known	missense	c.3683	p.T1228I	0.001	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127	tier1	-	-	36	0	0.00	29	19	39.58
ALPL	0	genome.wustl.edu	37	1	21894731	21894731	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	21894731	21894731	G	A	SNP	ALPL	ENST00000374832	human	ensembl	74_37	+1	known	silent	c.783	p.P261	0.003	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase,prints_Alkaline_phosphatase	-	no_errors	ALPL	HGNC	ENSG00000162551	tier1	-	-	52	0	0.00	49	16	24.62
ALX4	0	genome.wustl.edu	37	11	44331253	44331253	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	44331253	44331253	C	T	SNP	ALX4	ENST00000329255	human	ensembl	74_37	-1	known	silent	c.360	p.P120	1.000	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	ALX4	HGNC	ENSG00000052850	tier1	-	-	62	0	0.00	37	9	19.57
AMBRA1	0	genome.wustl.edu	37	11	46564329	46564329	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	46564329	46564329	C	A	SNP	AMBRA1	ENST00000458649	human	ensembl	74_37	-1	known	missense	c.1238	p.G413V	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	AMBRA1	HGNC	ENSG00000110497	tier1	-	-	20	0	0.00	17	9	34.62
AMELX	0	genome.wustl.edu	37	X	11316886	11316886	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	11316886	11316886	G	A	SNP	AMELX	ENST00000380712	human	ensembl	74_37	+1	known	silent	c.405	p.P135	0.521	pfam_Amelogenin,smart_Amelogenin	pfam_Amelogenin,smart_Amelogenin,prints_Amelogenin	-	no_errors	AMELX	HGNC	ENSG00000125363	tier1	-	-	208	0	0.00	80	21	20.39
AMOTL1	0	genome.wustl.edu	37	11	94528221	94528221	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	94528221	94528221	C	A	SNP	AMOTL1	ENST00000433060	human	ensembl	74_37	+1	known	missense	c.94	p.L32I	1.000	NULL	pfam_Angiomotin_C,prints_Angiomotin	-	no_errors	AMOTL1	HGNC	ENSG00000166025	tier1	-	-	66	0	0.00	40	8	16.67
AMOTL1	0	genome.wustl.edu	37	11	94533455	94533455	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	94533455	94533455	C	-	DEL	AMOTL1	ENST00000433060	human	ensembl	74_37	+1	known	frame_shift_del	c.1099	p.P368fs	1.000	NULL	pfam_Angiomotin_C,prints_Angiomotin	-	no_errors	AMOTL1	HGNC	ENSG00000166025	tier1			40	0	0.00	31	8	20.51
AMY1C	0	genome.wustl.edu	37	1	104297163	104297163	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	104297163	104297163	G	A	SNP	AMY1C	ENST00000370079	human	ensembl	74_37	+1	known	silent	c.921	p.A307	0.939	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,prints_Alpha_amylase	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY1C	HGNC	ENSG00000187733	tier1	-	-	94	0	0.00	64	18	21.95
AMY1C	0	genome.wustl.edu	37	1	104297407	104297407	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	104297407	104297407	C	T	SNP	AMY1C	ENST00000370079	human	ensembl	74_37	+1	known	missense	c.1072	p.R358C	0.999	superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY1C	HGNC	ENSG00000187733	tier1	-	-	35	0	0.00	38	7	15.56
ANAPC1	0	genome.wustl.edu	37	2	112614258	112614259	+	Splice_Site	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	112614258	112614259	-	A	INS	ANAPC1	ENST00000341068	human	ensembl	74_37	-1	known	splice_site_ins	c.1450-3_1450-2	e12-2	0.992:0.087	-	-	-	no_errors	ANAPC1	HGNC	ENSG00000153107	tier1			177	0	0.00	188	32	14.55
ANAPC1	0	genome.wustl.edu	37	2	112614257	112614258	+	Splice_Site	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	112614257	112614258	0	T	INS	ANAPC1	ENST00000341068	human	ensembl	74_37	-1	known	splice_site_ins	c.1450-2_1450-1	e12-1	0.994:0.992	-	-	-	no_errors	ANAPC1	HGNC	ENSG00000153107				175	0	0.00	206	17	7.62
ANGPTL2	0	genome.wustl.edu	37	9	129870796	129870796	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	129870796	129870796	T	C	SNP	ANGPTL2	ENST00000373425	human	ensembl	74_37	-1	known	missense	c.215	p.N72S	1.000	NULL	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPTL2	HGNC	ENSG00000136859	tier1	-	-	31	0	0.00	20	5	20.00
ANGPTL4	0	genome.wustl.edu	37	19	8431167	8431167	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	8431167	8431167	C	T	SNP	ANGPTL4	ENST00000301455	human	ensembl	74_37	+1	known	missense	c.511	p.P171S	0.001	NULL	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	-	no_errors	ANGPTL4	HGNC	ENSG00000167772	tier1	-	-	35	0	0.00	21	9	30.00
ANK1	0	genome.wustl.edu	37	8	41553959	41553959	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	41553959	41553959	G	A	SNP	ANK1	ENST00000396942	human	ensembl	74_37	-1	known	missense	c.2882	p.T961M	1.000	pfam_ZU5,smart_ZU5,pfscan_ZU5	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534	tier1	-	-	99	0	0.00	104	29	21.80
ANK2	0	genome.wustl.edu	37	4	114294594	114294594	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	114294594	114294594	G	A	SNP	ANK2	ENST00000357077	human	ensembl	74_37	+1	known	missense	c.11848	p.E3950K	0.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK2	HGNC	ENSG00000145362	tier1	-	-	47	0	0.00	37	12	24.49
ANK3	0	genome.wustl.edu	37	10	61819734	61819734	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	61819734	61819734	G	A	SNP	ANK3	ENST00000355288	human	ensembl	74_37	-1	known	missense	c.2189	p.T730I	1.000	NULL	pfam_ZU5,pfam_Death_domain,superfamily_DEATH-like_dom,smart_ZU5,smart_Death_domain,pfscan_Death_domain,pfscan_ZU5	-	no_errors	ANK3	HGNC	ENSG00000151150	tier1	-	-	63	0	0.00	33	9	21.43
ANK3	0	genome.wustl.edu	37	10	61835822	61835822	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	61835822	61835822	G	A	SNP	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	missense	c.4817	p.T1606M	0.949	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150	tier1	-	-	50	0	0.00	43	5	10.42
ANKMY1	0	genome.wustl.edu	37	2	241465733	241465733	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	241465733	241465733	G	A	SNP	ANKMY1	ENST00000272972	human	ensembl	74_37	-1	known	silent	c.816	p.H272	0.001	pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_MORN,pfam_Znf_MYND,superfamily_Ankyrin_rpt-contain_dom,smart_MORN,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Znf_MYND	-	no_errors	ANKMY1	HGNC	ENSG00000144504	tier1	-	-	61	0	0.00	45	18	28.57
ANKRD10	0	genome.wustl.edu	37	13	111553046	111553046	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	111553046	111553046	A	G	SNP	ANKRD10	ENST00000475809	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ANKRD10	HGNC	ENSG00000088448	tier1	-	-	33	0	0.00	25	5	16.67
ANKRD17	0	genome.wustl.edu	37	4	73957694	73957694	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	73957694	73957694	G	A	SNP	ANKRD17	ENST00000358602	human	ensembl	74_37	-1	known	missense	c.5651	p.A1884V	1.000	NULL	pfam_Ankyrin_rpt,pfam_KH_dom_type_1,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_KH_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_KH_dom_type_1,prints_Ankyrin_rpt	-	no_errors	ANKRD17	HGNC	ENSG00000132466	tier1	-	-	55	0	0.00	60	5	7.69
ANKRD19P	0	genome.wustl.edu	37	9	95588877	95588877	+	RNA	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	95588877	95588877	T	G	SNP	ANKRD19P	ENST00000460854	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.026	-	-	-	no_errors	ANKRD19P	HGNC	ENSG00000187984	tier1	-	-	21	0	0.00	25	6	19.35
ANKRD20A8P	0	genome.wustl.edu	37	2	95483038	95483038	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	95483038	95483038	A	0	DEL	ANKRD20A8P	ENST00000432432	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.185	-	-	-	no_errors	ANKRD20A8P	HGNC	ENSG00000229089				85	0	0.00	90	12	11.76
ANKRD28	0	genome.wustl.edu	37	3	15717503	15717503	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	15717503	15717503	G	A	SNP	ANKRD28	ENST00000498713	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ANKRD28	HGNC	ENSG00000206560	tier1	-	-	31	0	0.00	29	7	19.44
ANKRD29	0	genome.wustl.edu	37	18	21218906	21218906	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	21218906	21218906	A	G	SNP	ANKRD29	ENST00000592179	human	ensembl	74_37	-1	known	silent	c.237	p.G79	0.999	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD29	HGNC	ENSG00000154065	tier1	-	-	61	0	0.00	62	9	12.68
ANKRD33B	0	genome.wustl.edu	37	5	10618519	10618519	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	10618519	10618519	C	T	SNP	ANKRD33B	ENST00000504806	human	ensembl	74_37	+1	known	silent	c.441	p.D147	0.995	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD33B	HGNC	ENSG00000164236	tier1	-	-	88	0	0.00	39	21	35.00
ANKRD34B	0	genome.wustl.edu	37	5	79855769	79855769	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	79855769	79855769	G	A	SNP	ANKRD34B	ENST00000338682	human	ensembl	74_37	-1	known	missense	c.70	p.R24C	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD34B	HGNC	ENSG00000189127	tier1	rs201133010	-	47	0	0.00	25	13	34.21
ANKRD36C	0	genome.wustl.edu	37	2	96578015	96578015	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	96578015	96578015	T	-	DEL	ANKRD36C	ENST00000456556	human	ensembl	74_37	-1	known	frame_shift_del	c.2630	p.K877fs	0.057	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD36C	HGNC	ENSG00000174501	tier1			266	0	0.00	234	41	14.91
ANKRD49	0	genome.wustl.edu	37	11	94232497	94232498	+	RNA	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	94232497	94232498	-	T	INS	ANKRD49	ENST00000538535	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ANKRD49	HGNC	ENSG00000168876	tier1			12	0	0.00	15	3	16.67
ANKRD6	0	genome.wustl.edu	37	6	90333705	90333705	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	90333705	90333705	C	-	DEL	ANKRD6	ENST00000339746	human	ensembl	74_37	+1	known	frame_shift_del	c.1147	p.P384fs	0.966	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD6	HGNC	ENSG00000135299	tier1			59	0	0.00	41	19	31.67
ANKRD60	0	genome.wustl.edu	37	20	56796522	56796522	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	56796522	56796522	C	T	SNP	ANKRD60	ENST00000457363	human	ensembl	74_37	-1	known	missense	c.599	p.R200Q	0.003	superfamily_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Ubiquitin_supergroup	-	no_errors	ANKRD60	HGNC	ENSG00000124227	tier1	-	-	54	0	0.00	40	9	18.37
ANKRD62P1-PARP4P3	0	genome.wustl.edu	37	22	17140438	17140438	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	17140438	17140438	T	-	DEL	ANKRD62P1-PARP4P3	ENST00000456726	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.042	-	-	-	no_errors	ANKRD62P1-PARP4P3	HGNC	ENSG00000189295	tier1			33	0	0.00	14	5	26.32
ANKS6	0	genome.wustl.edu	37	9	101552504	101552504	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	101552504	101552504	G	A	SNP	ANKS6	ENST00000375018	human	ensembl	74_37	-1	known	silent	c.744	p.G248	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS6	HGNC	ENSG00000165138	tier1	-	-	36	0	0.00	15	5	25.00
ANLN	0	genome.wustl.edu	37	7	36445892	36445892	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	36445892	36445892	G	A	SNP	ANLN	ENST00000265748	human	ensembl	74_37	+1	known	missense	c.590	p.G197D	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	ANLN	HGNC	ENSG00000011426	tier1	-	-	55	0	0.00	31	11	26.19
ANO4	0	genome.wustl.edu	37	12	101488063	101488063	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	101488063	101488063	G	A	SNP	ANO4	ENST00000392977	human	ensembl	74_37	+1	known	silent	c.1731	p.T577	0.813	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO4	HGNC	ENSG00000151572	tier1	-	-	90	0	0.00	44	27	38.03
ANO8	0	genome.wustl.edu	37	19	17443959	17443961	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	17443959	17443961	TCC	-	DEL	ANO8	ENST00000159087	human	ensembl	74_37	-1	known	in_frame_del	c.440_438	p.E146in_frame_del	1.000:1.000:1.000	NULL	pfam_Anoctamin	-	no_errors	ANO8	HGNC	ENSG00000074855	tier1			43	0	0.00	35	9	20.45
ANXA11	0	genome.wustl.edu	37	10	81923157	81923157	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	81923157	81923157	T	G	SNP	ANXA11	ENST00000265447	human	ensembl	74_37	-1	known	missense	c.1034	p.N345T	1.000	NULL	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinXI,prints_AnnexinVII	-	no_errors	ANXA11	HGNC	ENSG00000122359	tier1	-	-	59	0	0.00	37	15	28.85
ANXA7	0	genome.wustl.edu	37	10	75135834	75135835	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	75135834	75135835	AA	-	DEL	ANXA7	ENST00000463788	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.004	-	-	-	no_errors	ANXA7	HGNC	ENSG00000138279	tier1			42	0	0.00	30	6	16.67
AP1B1	0	genome.wustl.edu	37	22	29737580	29737580	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	29737580	29737580	G	A	SNP	AP1B1	ENST00000357586	human	ensembl	74_37	-1	known	missense	c.1706	p.T569M	1.000	superfamily_ARM-type_fold,pirsf_AP_complex_bsu_1_2_4	pfam_Clathrin/coatomer_adapt-like_N,pfam_B-adaptin_app_sub_C,pfam_HEAT,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Armadillo,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP_complex_bsu_1_2_4	-	no_errors	AP1B1	HGNC	ENSG00000100280	tier1	-	-	52	0	0.00	39	24	38.10
AP1G1	0	genome.wustl.edu	37	16	71803440	71803440	+	Splice_Site	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	71803440	71803440	A	-	DEL	AP1G1	ENST00000423132	human	ensembl	74_37	-1	known	splice_site_del	c.643-1	e6-1	0.996	-	-	-	no_errors	AP1G1	HGNC	ENSG00000166747	tier1			43	0	0.00	26	8	23.53
AP2A2	0	genome.wustl.edu	37	11	992535	992535	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	992535	992535	C	T	SNP	AP2A2	ENST00000332231	human	ensembl	74_37	+1	known	silent	c.1305	p.Y435	0.991	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_AP2_complex_asu	pfam_Clathrin/coatomer_adapt-like_N,pfam_Clathrin_a-adaptin_app_sub_C,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_ARM-type_fold,superfamily_Coatomer/calthrin_app_sub_C,superfamily_Coatomer/clathrin_app_Ig-like,smart_Clathrin_a/b/g-adaptin_app_Ig,pirsf_AP2_complex_asu	-	no_errors	AP2A2	HGNC	ENSG00000183020				34	0	0.00	34	2	5.56
APBA1	0	genome.wustl.edu	37	9	72131557	72131557	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	72131557	72131557	G	A	SNP	APBA1	ENST00000265381	human	ensembl	74_37	-1	known	silent	c.570	p.Y190	0.984	NULL	pfam_PTB/PI_dom,pfam_PDZ,superfamily_PDZ,smart_PTB/PI_dom,smart_PDZ,pfscan_PDZ,pfscan_PTB/PI_dom	-	no_errors	APBA1	HGNC	ENSG00000107282	tier1	-	-	50	0	0.00	37	9	19.57
APBB1	0	genome.wustl.edu	37	11	6423942	6423942	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	6423942	6423942	C	T	SNP	APBB1	ENST00000389906	human	ensembl	74_37	-1	known	missense	c.1118	p.R373H	1.000	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_PTB/PI_dom,pfam_WW_dom,pfam_PTB,superfamily_WW_dom,smart_WW_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom,pfscan_WW_dom	-	no_errors	APBB1	HGNC	ENSG00000166313				37	0	0.00	45	6	11.76
APOA1	0	genome.wustl.edu	37	11	116706756	116706756	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	116706756	116706756	C	T	SNP	APOA1	ENST00000236850	human	ensembl	74_37	-1	known	missense	c.572	p.S191N	0.980	pfam_ApoA1_A4_E	pfam_ApoA1_A4_E	-	no_errors	APOA1	HGNC	ENSG00000118137				41	0	0.00	36	6	14.29
APOC1	0	genome.wustl.edu	37	19	45419666	45419666	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	45419666	45419666	A	-	DEL	APOC1	ENST00000592885	human	ensembl	74_37	+1	novel	frame_shift_del	c.278	p.T96fs	0.005	NULL	pfam_ApoC-I	-	no_errors	APOC1	HGNC	ENSG00000130208	tier1			22	0	0.00	28	4	12.50
APP	0	genome.wustl.edu	37	21	27264106	27264106	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	27264106	27264106	C	T	SNP	APP	ENST00000346798	human	ensembl	74_37	-1	known	silent	c.2139	p.A713	0.996	pfam_Amyloid_glyco_Abeta,prints_Amyloid_glyco,prints_Amyloid_glyco_Abeta	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,pfam_Amyloid_glyco_Abeta,pfam_Prot_inh_Kunz-m,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,superfamily_Prot_inh_Kunz-m,smart_Amyloid_glyco_extra,smart_Prot_inh_Kunz-m,prints_Amyloid_glyco,prints_Amyloid_glyco_Abeta,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	APP	HGNC	ENSG00000142192	tier1	-	-	62	0	0.00	43	19	30.65
APP	0	genome.wustl.edu	37	21	27269931	27269931	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	27269931	27269931	G	A	SNP	APP	ENST00000346798	human	ensembl	74_37	-1	known	missense	c.2018	p.A673V	0.997	NULL	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,pfam_Amyloid_glyco_Abeta,pfam_Prot_inh_Kunz-m,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,superfamily_Prot_inh_Kunz-m,smart_Amyloid_glyco_extra,smart_Prot_inh_Kunz-m,prints_Amyloid_glyco,prints_Amyloid_glyco_Abeta,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	APP	HGNC	ENSG00000142192	tier1	rs193922916	-	72	0	0.00	54	6	10.00
APPBP2	0	genome.wustl.edu	37	17	58539518	58539518	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	58539518	58539518	A	-	DEL	APPBP2	ENST00000592995	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.694	-	-	-	no_errors	APPBP2	HGNC	ENSG00000062725	tier1			43	0	0.00	24	17	41.46
AQP3	0	genome.wustl.edu	37	9	33442212	33442212	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	33442212	33442212	G	-	DEL	AQP3	ENST00000493581	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	AQP3	HGNC	ENSG00000165272	tier1			18	0	0.00	8	5	38.46
ARAP1	0	genome.wustl.edu	37	11	72425237	72425238	+	Frame_Shift_Ins	INS	-	-	GG			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	72425237	72425238	-	GG	INS	ARAP1	ENST00000393609	human	ensembl	74_37	-1	known	frame_shift_ins	c.639_638	p.E214fs	0.020:0.300	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_Ras-assoc,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP1	HGNC	ENSG00000186635	tier1			50	0	0.00	50	7	12.28
ARAP2	0	genome.wustl.edu	37	4	36212182	36212182	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	36212182	36212182	T	-	DEL	ARAP2	ENST00000303965	human	ensembl	74_37	-1	known	frame_shift_del	c.1317	p.A440fs	0.982	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_SAM_2,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP2	HGNC	ENSG00000047365	tier1			64	0	0.00	64	14	17.95
ARFGEF2	0	genome.wustl.edu	37	20	47602031	47602031	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	47602031	47602031	A	T	SNP	ARFGEF2	ENST00000371917	human	ensembl	74_37	+1	known	missense	c.2157	p.E719D	0.780	pfam_Sec7_dom,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	pfam_Sec7_dom,pfam_DUF1981_Sec7_assoc,superfamily_Sec7_dom,superfamily_ARM-type_fold,smart_Sec7_dom,pfscan_Sec7_dom	-	no_errors	ARFGEF2	HGNC	ENSG00000124198	tier1	-	-	73	0	0.00	64	4	5.88
ARHGAP11B	0	genome.wustl.edu	37	15	30926445	30926445	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	30926445	30926445	T	0	DEL	ARHGAP11B	ENST00000428041	human	ensembl	74_37	+1	known	frame_shift_del	c.370	p.F125fs	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP11B	HGNC	ENSG00000187951				48	0	0.00	18	9	33.33
ARHGAP12	0	genome.wustl.edu	37	10	32096255	32096255	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	32096255	32096255	A	-	DEL	ARHGAP12	ENST00000492028	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARHGAP12	HGNC	ENSG00000165322	tier1			42	0	0.00	39	11	22.00
ARHGAP17	0	genome.wustl.edu	37	16	24960750	24960750	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	24960750	24960750	G	A	SNP	ARHGAP17	ENST00000289968	human	ensembl	74_37	-1	known	missense	c.1102	p.P368S	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_BAR_dom,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_BAR_dom,smart_RhoGAP_dom,pfscan_BAR_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP17	HGNC	ENSG00000140750	tier1	-	-	56	0	0.00	38	5	11.63
ARHGAP21	0	genome.wustl.edu	37	10	24889664	24889664	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	24889664	24889664	C	T	SNP	ARHGAP21	ENST00000396432	human	ensembl	74_37	-1	known	missense	c.3043	p.D1015N	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP21	HGNC	ENSG00000107863	tier1	-	-	61	0	0.00	73	4	5.19
ARHGAP21	0	genome.wustl.edu	37	10	24889717	24889717	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	24889717	24889717	T	A	SNP	ARHGAP21	ENST00000396432	human	ensembl	74_37	-1	known	missense	c.2990	p.D997V	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP21	HGNC	ENSG00000107863	tier1	-	-	60	0	0.00	58	16	21.33
ARHGAP23	0	genome.wustl.edu	37	17	36622835	36622835	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	36622835	36622835	G	T	SNP	ARHGAP23	ENST00000431231	human	ensembl	74_37	+1	known	missense	c.911	p.R304L	1.000	NULL	pfam_RhoGAP_dom,pfam_PDZ,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP23	HGNC	ENSG00000225485	tier1	-	-	11	0	0.00	13	4	23.53
ARHGAP23	0	genome.wustl.edu	37	17	36634129	36634129	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	36634129	36634129	G	A	SNP	ARHGAP23	ENST00000431231	human	ensembl	74_37	+1	known	missense	c.2428	p.E810K	1.000	smart_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_PDZ,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP23	HGNC	ENSG00000225485	tier1	-	-	72	0	0.00	54	9	14.29
ARHGAP28	0	genome.wustl.edu	37	18	6873435	6873435	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	6873435	6873435	G	T	SNP	ARHGAP28	ENST00000400091	human	ensembl	74_37	+1	known	missense	c.982	p.G328C	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP28	HGNC	ENSG00000088756	tier1	-	-	55	0	0.00	44	11	20.00
ARHGAP33	0	genome.wustl.edu	37	19	36278975	36278975	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	36278975	36278975	G	A	SNP	ARHGAP33	ENST00000007510	human	ensembl	74_37	+1	known	missense	c.3508	p.V1170I	1.000	NULL	pfam_RhoGAP_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP33	HGNC	ENSG00000004777	tier1	-	-	21	0	0.00	15	5	25.00
ARHGAP35	0	genome.wustl.edu	37	19	47424426	47424426	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	47424426	47424426	C	T	SNP	ARHGAP35	ENST00000404338	human	ensembl	74_37	+1	known	missense	c.2494	p.R832W	1.000	NULL	pfam_RhoGAP_dom,pfam_Small_GTPase,pfam_FF_domain,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP35	HGNC	ENSG00000160007	tier1	-	-	89	0	0.00	51	22	30.14
ARHGAP36	0	genome.wustl.edu	37	X	130217937	130217937	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	130217937	130217937	G	A	SNP	ARHGAP36	ENST00000276211	human	ensembl	74_37	+1	known	silent	c.549	p.G183	0.498	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP36	HGNC	ENSG00000147256	tier1	-	-	61	0	0.00	35	11	23.91
ARHGEF15	0	genome.wustl.edu	37	17	8222397	8222397	+	Silent	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	8222397	8222397	T	G	SNP	ARHGEF15	ENST00000361926	human	ensembl	74_37	+1	known	silent	c.2106	p.S702	0.998	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF15	HGNC	ENSG00000198844				32	0	0.00	20	3	13.04
ARHGEF26	0	genome.wustl.edu	37	3	153840548	153840548	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	153840548	153840548	C	T	SNP	ARHGEF26	ENST00000356448	human	ensembl	74_37	+1	known	missense	c.767	p.A256V	1.000	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF26	HGNC	ENSG00000114790	tier1	-	-	96	0	0.00	61	22	26.51
ARHGEF26	0	genome.wustl.edu	37	3	153935686	153935686	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	153935686	153935686	G	A	SNP	ARHGEF26	ENST00000356448	human	ensembl	74_37	+1	known	missense	c.1874	p.R625Q	1.000	superfamily_DH-domain	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF26	HGNC	ENSG00000114790	tier1	-	-	104	0	0.00	100	17	14.53
ARHGEF28	0	genome.wustl.edu	37	5	73181702	73181702	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	73181702	73181702	G	A	SNP	ARHGEF28	ENST00000545377	human	ensembl	74_37	+1	known	missense	c.3083	p.R1028H	0.998	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF28	HGNC	ENSG00000214944				22	0	0.00	29	2	6.45
ARHGEF33	0	genome.wustl.edu	37	2	39164523	39164523	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	39164523	39164523	C	A	SNP	ARHGEF33	ENST00000398800	human	ensembl	74_37	+1	known	missense	c.613	p.L205I	0.700	NULL	pfam_DH-domain,superfamily_DH-domain,superfamily_Prefoldin,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF33	HGNC	ENSG00000214694	tier1	-	-	26	0	0.00	21	5	19.23
ARHGEF35	0	genome.wustl.edu	37	7	143884145	143884145	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	143884145	143884145	C	T	SNP	ARHGEF35	ENST00000378115	human	ensembl	74_37	-1	known	silent	c.1332	p.L444	0.045	NULL	NULL	-	no_errors	ARHGEF35	HGNC	ENSG00000213214				66	0	0.00	48	3	5.88
ARHGEF40	0	genome.wustl.edu	37	14	21542955	21542956	+	In_Frame_Ins	INS	-	-	GAG			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	21542955	21542956	-	GAG	INS	ARHGEF40	ENST00000298694	human	ensembl	74_37	+1	known	in_frame_ins	c.1066_1067	p.360in_frame_insG	0.761:0.797	NULL	pfam_DH-domain,superfamily_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF40	HGNC	ENSG00000165801	tier1			41	0	0.00	35	8	18.60
ARID1B	0	genome.wustl.edu	37	6	157527517	157527517	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	157527517	157527517	G	A	SNP	ARID1B	ENST00000367148	human	ensembl	74_37	+1	known	missense	c.5362	p.E1788K	0.987	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1B	HGNC	ENSG00000049618	tier1	-	-	42	0	0.00	23	8	25.81
ARID3B	0	genome.wustl.edu	37	15	74883534	74883534	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	74883534	74883534	C	T	SNP	ARID3B	ENST00000346246	human	ensembl	74_37	+1	known	silent	c.924	p.A308	0.975	superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID3B	HGNC	ENSG00000179361	tier1	-	-	82	0	0.00	41	16	28.07
ARID4B	0	genome.wustl.edu	37	1	235345232	235345233	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	235345232	235345233	-	T	INS	ARID4B	ENST00000264183	human	ensembl	74_37	-1	known	frame_shift_ins	c.3002_3001	p.T1001fs	0.001:0.000	NULL	pfam_RBB1NT,pfam_ARID/BRIGHT_DNA-bd,pfam_Tudor-knot,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Chromodomain-like,smart_Tudor,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID4B	HGNC	ENSG00000054267	tier1			101	0	0.00	69	28	28.87
ARL10	0	genome.wustl.edu	37	5	175795902	175795902	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	175795902	175795902	C	T	SNP	ARL10	ENST00000310389	human	ensembl	74_37	+1	known	missense	c.478	p.R160W	0.996	pfam_Small_GTPase_ARF/SAR,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,prints_Small_GTPase_ARF/SAR	pfam_Small_GTPase_ARF/SAR,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_SAR1,smart_Small_GTPase_ARF,prints_Small_GTPase_ARF/SAR	-	no_errors	ARL10	HGNC	ENSG00000175414	tier1	rs140105577	-	103	0	0.00	94	20	17.54
ARL13B	0	genome.wustl.edu	37	3	93768343	93768343	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	93768343	93768343	C	T	SNP	ARL13B	ENST00000394222	human	ensembl	74_37	+1	known	missense	c.1118	p.T373M	0.956	NULL	pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,prints_Small_GTPase_ARF/SAR,tigrfam_Small_GTP-bd_dom	-	no_errors	ARL13B	HGNC	ENSG00000169379	tier1	-	-	80	0	0.00	37	16	30.19
ARPC1A	0	genome.wustl.edu	37	7	98963741	98963742	+	RNA	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	98963741	98963742	-	T	INS	ARPC1A	ENST00000463009	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.031:0.995	-	-	-	no_errors	ARPC1A	HGNC	ENSG00000241685	tier1			69	0	0.00	37	17	31.48
ARPC5	0	genome.wustl.edu	37	1	183595641	183595641	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	183595641	183595641	T	-	DEL	ARPC5	ENST00000462965	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARPC5	HGNC	ENSG00000162704	tier1			34	0	0.00	27	4	12.90
ARSJ	0	genome.wustl.edu	37	4	114823494	114823494	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	114823494	114823494	T	-	DEL	ARSJ	ENST00000315366	human	ensembl	74_37	-1	known	frame_shift_del	c.1736	p.K579fs	0.628	NULL	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSJ	HGNC	ENSG00000180801	tier1			29	0	0.00	19	4	17.39
ARV1	0	genome.wustl.edu	37	1	231131567	231131567	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	231131567	231131567	A	-	DEL	ARV1	ENST00000310256	human	ensembl	74_37	+1	known	frame_shift_del	c.510	p.K173fs	0.000	pfam_Arv1	pfam_Arv1	-	no_errors	ARV1	HGNC	ENSG00000173409	tier1			56	0	0.00	37	12	24.49
ASCC2	0	genome.wustl.edu	37	22	30221678	30221678	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	30221678	30221678	C	T	SNP	ASCC2	ENST00000307790	human	ensembl	74_37	-1	known	missense	c.173	p.R58H	1.000	NULL	pfam_CUE,superfamily_UBA-like,smart_CUE,pfscan_CUE	-	no_errors	ASCC2	HGNC	ENSG00000100325	tier1	-	-	73	0	0.00	62	7	10.00
ASCC3	0	genome.wustl.edu	37	6	101296336	101296336	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	101296336	101296336	A	-	DEL	ASCC3	ENST00000369162	human	ensembl	74_37	-1	known	frame_shift_del	c.489	p.F163fs	1.000	NULL	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ASCC3	HGNC	ENSG00000112249	tier1			26	0	0.00	13	4	23.53
ASGR1	0	genome.wustl.edu	37	17	7080615	7080615	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	7080615	7080615	C	T	SNP	ASGR1	ENST00000269299	human	ensembl	74_37	-1	known	missense	c.101	p.R34H	0.603	pfam_Lectin_N	pfam_Lectin_N,pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	ASGR1	HGNC	ENSG00000141505	tier1	-	-	63	0	0.00	54	12	18.18
ASIC2	0	genome.wustl.edu	37	17	31618963	31618963	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	31618963	31618963	C	-	DEL	ASIC2	ENST00000225823	human	ensembl	74_37	-1	known	frame_shift_del	c.171	p.R58fs	0.990	NULL	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	-	no_errors	ASIC2	HGNC	ENSG00000108684	tier1			35	0	0.00	29	3	9.38
ASMT	0	genome.wustl.edu	37	X	1761874	1761874	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	1761874	1761874	A	G	SNP	ASMT	ENST00000381241	human	ensembl	74_37	+1	known	silent	c.1089	p.G363	0.762	pirsf_COMT	pfam_O_MeTrfase_2,pirsf_COMT	-	no_errors	ASMT	HGNC	ENSG00000196433	tier1	-	-	150	0	0.00	100	8	7.41
ASPDH	0	genome.wustl.edu	37	19	51015803	51015803	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	51015803	51015803	C	T	SNP	ASPDH	ENST00000389208	human	ensembl	74_37	-1	known	missense	c.467	p.G156D	0.999	NULL	pfam_Asp_DH,pfam_Asp/hSer_DH_NAD-bd	-	no_errors	ASPDH	HGNC	ENSG00000204653	tier1	-	-	76	0	0.00	66	6	8.33
ASPHD1	0	genome.wustl.edu	37	16	29912622	29912622	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	29912622	29912622	C	T	SNP	ASPHD1	ENST00000308748	human	ensembl	74_37	+1	known	silent	c.330	p.S110	0.827	NULL	pfam_Asp_Arg_b-Hydrxlase	-	no_errors	ASPHD1	HGNC	ENSG00000174939	tier1	-	-	32	0	0.00	19	10	34.48
ASPHD2	0	genome.wustl.edu	37	22	26830127	26830127	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	26830127	26830127	C	T	SNP	ASPHD2	ENST00000215906	human	ensembl	74_37	+1	known	silent	c.546	p.D182	0.234	NULL	pfam_Asp_Arg_b-Hydrxlase	-	no_errors	ASPHD2	HGNC	ENSG00000128203	tier1	-	-	51	0	0.00	44	9	16.98
ASTE1	0	genome.wustl.edu	37	3	130733047	130733048	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	130733047	130733048	TT	-	DEL	ASTE1	ENST00000264992	human	ensembl	74_37	-1	known	frame_shift_del	c.1894_1893	p.R632fs	0.014:0.001	NULL	pfam_XPG_DNA_repair_N	-	no_errors	ASTE1	HGNC	ENSG00000034533	tier1			40	0	0.00	20	18	47.37
ATF6B	0	genome.wustl.edu	37	6	32095989	32095989	+	RNA	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	32095989	32095989	C	-	DEL	ATF6B	ENST00000468502	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.565	-	-	-	no_errors	ATF6B	HGNC	ENSG00000213676	tier1			60	0	0.00	41	8	16.33
ATG2A	0	genome.wustl.edu	37	11	64677266	64677266	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	64677266	64677266	C	A	SNP	ATG2A	ENST00000421419	human	ensembl	74_37	-1	known	missense	c.1994	p.R665L	0.998	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2A	HGNC	ENSG00000110046	tier1	-	-	71	0	0.00	46	13	22.03
ATG2B	0	genome.wustl.edu	37	14	96788614	96788614	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	96788614	96788614	A	-	DEL	ATG2B	ENST00000488421	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ATG2B	HGNC	ENSG00000066739	tier1			25	0	0.00	30	11	26.83
ATG7	0	genome.wustl.edu	37	3	11468322	11468322	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	11468322	11468322	G	T	SNP	ATG7	ENST00000354449	human	ensembl	74_37	+1	known	missense	c.2001	p.K667N	1.000	tigrfam_Atg7	pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB,tigrfam_Atg7	-	no_errors	ATG7	HGNC	ENSG00000197548	tier1	-	-	77	0	0.00	66	12	15.38
ATL1	0	genome.wustl.edu	37	14	51026987	51026987	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	51026987	51026987	G	A	SNP	ATL1	ENST00000357032	human	ensembl	74_37	+1	known	missense	c.4	p.A2T	1.000	NULL	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_P-loop_NTPase,superfamily_Guanylate-bd_C	-	no_errors	ATL1	HGNC	ENSG00000198513	tier1	-	-	49	0	0.00	36	9	20.00
ATOH7	0	genome.wustl.edu	37	10	69991281	69991281	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	69991281	69991281	G	A	SNP	ATOH7	ENST00000373673	human	ensembl	74_37	-1	known	missense	c.154	p.R52C	0.999	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	ATOH7	HGNC	ENSG00000179774	tier1	-	-	40	0	0.00	32	7	17.95
ATP13A2	0	genome.wustl.edu	37	1	17316221	17316221	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	17316221	17316221	C	A	SNP	ATP13A2	ENST00000326735	human	ensembl	74_37	-1	known	missense	c.2574	p.Q858H	1.000	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A2	HGNC	ENSG00000159363	tier1	-	-	91	0	0.00	70	12	14.63
ATP13A3	0	genome.wustl.edu	37	3	194174452	194174452	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	194174452	194174452	A	T	SNP	ATP13A3	ENST00000256031	human	ensembl	74_37	-1	known	missense	c.821	p.V274D	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A3	HGNC	ENSG00000133657	tier1	-	-	52	0	0.00	34	14	29.17
ATP1A1	0	genome.wustl.edu	37	1	116926693	116926693	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	116926693	116926693	A	-	DEL	ATP1A1	ENST00000295598	human	ensembl	74_37	+1	known	frame_shift_del	c.70	p.K25fs	1.000	NULL	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A1	HGNC	ENSG00000163399	tier1			91	0	0.00	43	17	28.33
ATP2A1	0	genome.wustl.edu	37	16	28909403	28909403	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	28909403	28909403	C	T	SNP	ATP2A1	ENST00000357084	human	ensembl	74_37	+1	known	missense	c.1502	p.A501V	1.000	superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Ca-transp_IIA	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A1	HGNC	ENSG00000196296	tier1	-	-	57	0	0.00	50	7	12.28
ATP2A1	0	genome.wustl.edu	37	16	28912091	28912091	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	28912091	28912091	G	A	SNP	ATP2A1	ENST00000357084	human	ensembl	74_37	+1	known	missense	c.1954	p.A652T	0.998	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_IIA	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A1	HGNC	ENSG00000196296				50	0	0.00	47	6	11.32
ATP4A	0	genome.wustl.edu	37	19	36046453	36046454	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	36046453	36046454	-	T	INS	ATP4A	ENST00000262623	human	ensembl	74_37	-1	known	frame_shift_ins	c.2046_2045	p.D683fs	1.000:1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATPase_P-typ_H/K-transp_N,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP4A	HGNC	ENSG00000105675	tier1			60	0	0.00	38	10	20.83
ATP4A	0	genome.wustl.edu	37	19	36047856	36047856	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	36047856	36047856	C	T	SNP	ATP4A	ENST00000262623	human	ensembl	74_37	-1	known	missense	c.1828	p.V610I	0.998	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATPase_P-typ_H/K-transp_N,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP4A	HGNC	ENSG00000105675	tier1	-	-	80	0	0.00	26	5	16.13
ATP6V0E2	0	genome.wustl.edu	37	7	149572717	149572717	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	149572717	149572717	C	T	SNP	ATP6V0E2	ENST00000421974	human	ensembl	74_37	+1	known	silent	c.282	p.A94	0.033	pfam_ATPase_V0-cplx_e1/e2_su	pfam_ATPase_V0-cplx_e1/e2_su	-	no_errors	ATP6V0E2	HGNC	ENSG00000171130	tier1	-	-	31	0	0.00	41	4	8.89
ATP6V1B1	0	genome.wustl.edu	37	2	71191573	71191573	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	71191573	71191573	C	-	DEL	ATP6V1B1	ENST00000234396	human	ensembl	74_37	+1	known	frame_shift_del	c.1149	p.I386fs	0.999	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,superfamily_P-loop_NTPase,tigrfam_ATPase_V1-cplx_bsu	pfam_ATPase_F1/V1/A1_a/bsu_nucl-bd,pfam_ATPase_F1/V1/A1-cplx_a/bsu_C,pfam_ATPase_F1_a/bsu_N,superfamily_P-loop_NTPase,superfamily_ATPase_F1_a/bsu_N,superfamily_ATPase_F1/V1/A1-cplx_a/bsu_C,tigrfam_ATPase_V1-cplx_bsu	-	no_errors	ATP6V1B1	HGNC	ENSG00000116039	tier1			35	0	0.00	39	6	13.33
ATP7B	0	genome.wustl.edu	37	13	52532637	52532637	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	52532637	52532637	A	C	SNP	ATP7B	ENST00000242839	human	ensembl	74_37	-1	known	missense	c.2165	p.L722R	1.000	NULL	pfam_HeavyMe-assoc_HMA,pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_HeavyMe-assoc_HMA,pfscan_HeavyMe-assoc_HMA,prints_Cation_transp_P_typ_ATPase,tigrfam_Cation_transp_P-typ_ATPase_IB,tigrfam_Cation_transp_P_typ_ATPase,tigrfam_HMA_Cu_ion-bd	-	no_errors	ATP7B	HGNC	ENSG00000123191	tier1	-	-	68	0	0.00	47	9	16.07
ATP8B3	0	genome.wustl.edu	37	19	1795906	1795906	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	1795906	1795906	C	-	DEL	ATP8B3	ENST00000539485	human	ensembl	74_37	-1	known	frame_shift_del	c.2023	p.A675fs	0.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B3	HGNC	ENSG00000130270	tier1			29	0	0.00	27	5	15.62
ATP9A	0	genome.wustl.edu	37	20	50287773	50287773	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	50287773	50287773	C	T	SNP	ATP9A	ENST00000338821	human	ensembl	74_37	-1	known	missense	c.1061	p.G354D	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9A	HGNC	ENSG00000054793	tier1	-	-	51	0	0.00	43	8	15.69
ATR	0	genome.wustl.edu	37	3	142274740	142274740	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	142274740	142274740	T	-	DEL	ATR	ENST00000350721	human	ensembl	74_37	-1	known	frame_shift_del	c.2320	p.I774fs	0.000	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_PIK-rel_kinase_FAT,pfam_UME,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_UME,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_HEAT_type_2,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATR	HGNC	ENSG00000175054	tier1			59	0	0.00	62	11	15.07
ATRN	0	genome.wustl.edu	37	20	3526487	3526487	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	3526487	3526487	T	-	DEL	ATRN	ENST00000262919	human	ensembl	74_37	+1	known	frame_shift_del	c.687	p.F231fs	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Kelch_1,pfam_Plexin_repeat,pfam_CUB_dom,superfamily_C-type_lectin_fold,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_EG-like_dom,smart_CUB_dom,smart_Plexin-like_fold,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRN	HGNC	ENSG00000088812	tier1			72	0	0.00	66	8	10.81
ATRN	0	genome.wustl.edu	37	20	3557636	3557636	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	3557636	3557636	C	T	SNP	ATRN	ENST00000262919	human	ensembl	74_37	+1	known	missense	c.2345	p.A782V	1.000	smart_Plexin-like_fold	pfam_Kelch_1,pfam_Plexin_repeat,pfam_CUB_dom,superfamily_C-type_lectin_fold,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_EG-like_dom,smart_CUB_dom,smart_Plexin-like_fold,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRN	HGNC	ENSG00000088812	tier1	-	-	48	0	0.00	44	10	18.52
ATRNL1	0	genome.wustl.edu	37	10	117486834	117486837	+	Frame_Shift_Del	DEL	AACA	AACA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AACA	AACA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	117486834	117486837	AACA	-	DEL	ATRNL1	ENST00000355044	human	ensembl	74_37	+1	known	frame_shift_del	c.3872_3875	p.T1293fs	1.000:1.000:1.000:1.000	NULL	pfam_Kelch_1,pfam_Kelch_2,pfam_Plexin_repeat,pfam_CUB_dom,pfam_EGF_extracell,superfamily_C-type_lectin_fold,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_EG-like_dom,smart_CUB_dom,smart_Plexin-like_fold,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRNL1	HGNC	ENSG00000107518	tier1			48	0	0.00	37	12	24.49
ATRX	0	genome.wustl.edu	37	X	76762663	76762663	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	76762663	76762663	A	-	DEL	ATRX	ENST00000480283	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ATRX	HGNC	ENSG00000085224	tier1			45	0	0.00	20	10	33.33
ATXN2	0	genome.wustl.edu	37	12	111990213	111990213	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	111990213	111990213	C	T	SNP	ATXN2	ENST00000377617	human	ensembl	74_37	-1	known	missense	c.922	p.A308T	1.000	superfamily_LSM_dom	pfam_LsmAD_domain,pfam_Ataxin-2_C,superfamily_LSM_dom	-	no_errors	ATXN2	HGNC	ENSG00000204842				73	0	0.00	76	5	6.17
ATXN7L3	0	genome.wustl.edu	37	17	42275066	42275066	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	42275066	42275066	G	A	SNP	ATXN7L3	ENST00000454077	human	ensembl	74_37	-1	known	silent	c.84	p.V28	0.991	NULL	pfam_SAGA_su_Sgf11,pfam_SCA7_dom	-	no_errors	ATXN7L3	HGNC	ENSG00000087152	tier1	-	-	48	0	0.00	32	7	17.95
AURKAIP1	0	genome.wustl.edu	37	1	1309775	1309775	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	1309775	1309775	C	A	SNP	AURKAIP1	ENST00000321751	human	ensembl	74_37	-1	known	missense	c.103	p.G35W	0.000	NULL	pfam_DUF1713_mit	-	no_errors	AURKAIP1	HGNC	ENSG00000175756	tier1	-	-	39	0	0.00	18	12	40.00
AURKB	0	genome.wustl.edu	37	17	8110190	8110190	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	8110190	8110190	G	T	SNP	AURKB	ENST00000585124	human	ensembl	74_37	-1	known	missense	c.415	p.R139S	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	AURKB	HGNC	ENSG00000178999				74	0	0.00	43	3	6.52
AUTS2	0	genome.wustl.edu	37	7	70239044	70239044	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	70239044	70239044	C	T	SNP	AUTS2	ENST00000342771	human	ensembl	74_37	+1	known	missense	c.1861	p.P621S	1.000	NULL	prints_AUTS2	-	no_errors	AUTS2	HGNC	ENSG00000158321	tier1	-	-	34	0	0.00	26	5	16.13
AVPR1A	0	genome.wustl.edu	37	12	63541258	63541258	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	63541258	63541258	T	G	SNP	AVPR1A	ENST00000299178	human	ensembl	74_37	-1	known	missense	c.1138	p.S380R	1.000	pfam_DUF1856,prints_Vprs_V1A_rcpt	pfam_GPCR_Rhodpsn,pfam_DUF1856,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Vprs_V1A_rcpt,prints_Vasoprsn_rcpt,prints_GPCR_Rhodpsn	-	no_errors	AVPR1A	HGNC	ENSG00000166148	tier1	-	-	59	0	0.00	45	7	13.46
AXIN1	0	genome.wustl.edu	37	16	348180	348180	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	348180	348180	G	-	DEL	AXIN1	ENST00000262320	human	ensembl	74_37	-1	known	frame_shift_del	c.1326	p.A443fs	0.000	NULL	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN1	HGNC	ENSG00000103126	tier1			97	0	0.00	61	17	21.79
AXIN1	0	genome.wustl.edu	37	16	360055	360055	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	360055	360055	G	-	DEL	AXIN1	ENST00000262320	human	ensembl	74_37	-1	known	frame_shift_del	c.1034	p.P345fs	1.000	NULL	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN1	HGNC	ENSG00000103126	tier1			13	0	0.00	15	4	21.05
AXIN2	0	genome.wustl.edu	37	17	63531800	63531800	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	63531800	63531800	C	T	SNP	AXIN2	ENST00000307078	human	ensembl	74_37	-1	known	silent	c.2181	p.S727	0.000	NULL	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN2	HGNC	ENSG00000168646	tier1	-	-	30	0	0.00	21	10	32.26
AZI2	0	genome.wustl.edu	37	3	28382061	28382061	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	28382061	28382061	T	-	DEL	AZI2	ENST00000479665	human	ensembl	74_37	-1	known	frame_shift_del	c.48	p.A17fs	0.996	NULL	NULL	-	no_errors	AZI2	HGNC	ENSG00000163512	tier1			51	0	0.00	27	16	37.21
B3GAT1	0	genome.wustl.edu	37	11	134253746	134253746	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	134253746	134253746	C	T	SNP	B3GAT1	ENST00000537389	human	ensembl	74_37	-1	known	missense	c.488	p.R163H	1.000	pfam_Glyco_trans_43	pfam_Glyco_trans_43	-	no_errors	B3GAT1	HGNC	ENSG00000109956	tier1	-	-	83	0	0.00	55	23	29.49
B4GALNT2	0	genome.wustl.edu	37	17	47230172	47230172	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	47230172	47230172	C	-	DEL	B4GALNT2	ENST00000300404	human	ensembl	74_37	+1	known	frame_shift_del	c.544	p.R183fs	1.000	pirsf_GM2_synthase	pfam_Glyco_trans_2,pirsf_GM2_synthase	-	no_errors	B4GALNT2	HGNC	ENSG00000167080	tier1			50	0	0.00	28	14	33.33
B9D2	0	genome.wustl.edu	37	19	41860681	41860681	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	41860681	41860681	G	A	SNP	B9D2	ENST00000243578	human	ensembl	74_37	-1	known	missense	c.452	p.T151I	0.998	pfam_B9_dom	pfam_B9_dom	-	no_errors	B9D2	HGNC	ENSG00000123810	tier1	-	-	79	0	0.00	64	16	20.00
BAALC	0	genome.wustl.edu	37	8	104225196	104225196	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	104225196	104225196	C	A	SNP	BAALC	ENST00000297574	human	ensembl	74_37	+1	known	silent	c.315	p.A105	0.483	NULL	pfam_BAALC	-	no_errors	BAALC	HGNC	ENSG00000164929	tier1	-	-	76	0	0.00	47	37	44.05
BAI2	0	genome.wustl.edu	37	1	32207741	32207741	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	32207741	32207741	G	A	SNP	BAI2	ENST00000373658	human	ensembl	74_37	-1	known	missense	c.1330	p.R444W	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI2	HGNC	ENSG00000121753	tier1	-	-	15	0	0.00	10	6	37.50
BAIAP2L1	0	genome.wustl.edu	37	7	97937012	97937012	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	97937012	97937012	G	A	SNP	BAIAP2L1	ENST00000005260	human	ensembl	74_37	-1	known	silent	c.1152	p.D384	0.006	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	pfam_IRSp53/MIM_homology_IMD,pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	BAIAP2L1	HGNC	ENSG00000006453	tier1	rs147254651	-	33	0	0.00	20	11	35.48
BANF2	0	genome.wustl.edu	37	20	17705764	17705764	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	17705764	17705764	G	A	SNP	BANF2	ENST00000545418	human	ensembl	74_37	+1	known	missense	c.115	p.A39T	0.903	pfam_BAF_prot,superfamily_BAF_prot	pfam_BAF_prot,superfamily_BAF_prot	-	no_errors	BANF2	HGNC	ENSG00000125888	tier1	-	-	37	0	0.00	44	8	15.38
BATF	0	genome.wustl.edu	37	14	76012941	76012941	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	76012941	76012941	C	T	SNP	BATF	ENST00000286639	human	ensembl	74_37	+1	known	missense	c.305	p.S102L	0.991	NULL	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	-	no_errors	BATF	HGNC	ENSG00000156127	tier1	-	-	40	0	0.00	39	4	9.30
BATF3	0	genome.wustl.edu	37	1	212870666	212870666	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	212870666	212870666	G	T	SNP	BATF3	ENST00000478275	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	BATF3	HGNC	ENSG00000123685	tier1	-	-	15	0	0.00	22	7	24.14
BAX	0	genome.wustl.edu	37	19	49458971	49458971	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	49458971	49458971	G	-	DEL	BAX	ENST00000293288	human	ensembl	74_37	+1	known	frame_shift_del	c.114	p.E41fs	0.588	NULL	pfam_Blc2_fam,pfscan_Bcl2-like,prints_Blc2_fam	-	no_errors	BAX	HGNC	ENSG00000087088	tier1			53	0	0.00	36	6	14.29
BAX	0	genome.wustl.edu	37	19	49459465	49459465	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	49459465	49459465	G	A	SNP	BAX	ENST00000293288	human	ensembl	74_37	+1	known	missense	c.244	p.A82T	0.006	pfam_Blc2_fam,pfscan_Bcl2-like	pfam_Blc2_fam,pfscan_Bcl2-like,prints_Blc2_fam	-	no_errors	BAX	HGNC	ENSG00000087088	tier1	-	-	63	0	0.00	35	6	14.63
BCAR3	0	genome.wustl.edu	37	1	94041654	94041654	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	94041654	94041654	C	T	SNP	BCAR3	ENST00000260502	human	ensembl	74_37	-1	known	missense	c.1719	p.M573I	1.000	superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_SH2,pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_SH2,smart_RasGRF_CDC25,pfscan_SH2,pfscan_RasGRF_CDC25	-	no_errors	BCAR3	HGNC	ENSG00000137936	tier1	-	-	37	0	0.00	38	4	9.52
BCHE	0	genome.wustl.edu	37	3	165547794	165547795	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	165547794	165547795	-	T	INS	BCHE	ENST00000264381	human	ensembl	74_37	-1	known	frame_shift_ins	c.1028_1027	p.T343fs	0.996:0.991	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AChE_tetra,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	BCHE	HGNC	ENSG00000114200	tier1			72	0	0.00	62	8	11.43
BCKDK	0	genome.wustl.edu	37	16	31120725	31120725	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	31120725	31120725	G	A	SNP	BCKDK	ENST00000219794	human	ensembl	74_37	+1	known	missense	c.181	p.A61T	0.941	NULL	pfam_BCDHK/PDK_N,pfam_HATPase_ATP-bd,superfamily_BCDHK/PDK_N,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pfscan_Sig_transdc_His_kinase_core,prints_Sig_transdc_His_kin-like_C	-	no_errors	BCKDK	HGNC	ENSG00000103507	tier1	-	-	67	0	0.00	57	8	12.31
BCL11A	0	genome.wustl.edu	37	2	60687304	60687306	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	60687304	60687306	AAA	-	DEL	BCL11A	ENST00000477659	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.436:0.471:0.209	-	-	-	no_errors	BCL11A	HGNC	ENSG00000119866	tier1			26	0	0.00	16	5	23.81
BCL11A	0	genome.wustl.edu	37	2	60687345	60687345	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	60687345	60687345	A	-	DEL	BCL11A	ENST00000477659	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.980	-	-	-	no_errors	BCL11A	HGNC	ENSG00000119866	tier1			39	0	0.00	24	11	31.43
BCL2	0	genome.wustl.edu	37	18	60985684	60985684	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	60985684	60985684	C	T	SNP	BCL2	ENST00000333681	human	ensembl	74_37	-1	known	silent	c.216	p.L72	0.017	tigrfam_Bcl2/BclX	pfam_Blc2_fam,pfam_Bcl2_BH4,smart_Bcl2_BH4,pfscan_Bcl2-like,pfscan_Bcl2_BH4,prints_Apop_reg_Bcl2,prints_Blc2_fam,prints_Apop_reg_BclX,tigrfam_Bcl2/BclX	-	no_errors	BCL2	HGNC	ENSG00000171791	tier1	-	-	25	0	0.00	9	7	43.75
BCL6	0	genome.wustl.edu	37	3	187440319	187440319	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	187440319	187440319	G	T	SNP	BCL6	ENST00000232014	human	ensembl	74_37	-1	known	missense	c.2048	p.A683D	1.000	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	BCL6	HGNC	ENSG00000113916				55	0	0.00	44	3	6.25
BCL7A	0	genome.wustl.edu	37	12	122492854	122492854	+	Silent	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	122492854	122492854	A	C	SNP	BCL7A	ENST00000538010	human	ensembl	74_37	+1	known	silent	c.583	p.R195	0.075	NULL	pfam_BCL7	-	no_errors	BCL7A	HGNC	ENSG00000110987	tier1	-	-	40	0	0.00	46	7	13.21
BCL7C	0	genome.wustl.edu	37	16	30846161	30846161	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	30846161	30846161	C	T	SNP	BCL7C	ENST00000576194	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	BCL7C	HGNC	ENSG00000099385	tier1	-	-	52	0	0.00	40	21	34.43
BCL9	0	genome.wustl.edu	37	1	147091501	147091501	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	147091501	147091501	C	-	DEL	BCL9	ENST00000234739	human	ensembl	74_37	+1	known	frame_shift_del	c.1540	p.P516fs	1.000	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9	HGNC	ENSG00000116128	tier1			45	0	0.00	34	4	10.53
BCL9L	0	genome.wustl.edu	37	11	118770651	118770652	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	118770651	118770652	-	G	INS	BCL9L	ENST00000334801	human	ensembl	74_37	-1	known	frame_shift_ins	c.3381_3380	p.P1128fs	0.988:0.996	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9L	HGNC	ENSG00000186174	tier1			64	0	0.00	49	8	14.04
BDNF	0	genome.wustl.edu	37	11	27679158	27679158	+	RNA	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	27679158	27679158	T	G	SNP	BDNF	ENST00000584049	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	BDNF	HGNC	ENSG00000176697	tier1	-	-	38	0	0.00	21	7	25.00
BECN1	0	genome.wustl.edu	37	17	40970681	40970681	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	40970681	40970681	A	-	DEL	BECN1	ENST00000361523	human	ensembl	74_37	-1	known	frame_shift_del	c.369	p.F123fs	1.000	pfam_Beclin_fam	pfam_Beclin_fam,superfamily_Translin	-	no_errors	BECN1	HGNC	ENSG00000126581	tier1			46	0	0.00	27	3	10.00
BICD1	0	genome.wustl.edu	37	12	32480649	32480649	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	32480649	32480649	C	T	SNP	BICD1	ENST00000281474	human	ensembl	74_37	+1	known	silent	c.1260	p.Y420	1.000	pfam_Bicaudal-D_microtubule-assoc	pfam_Bicaudal-D_microtubule-assoc,superfamily_SPOC_like_C_dom	-	no_errors	BICD1	HGNC	ENSG00000151746	tier1	-	-	30	0	0.00	26	14	34.15
BID	0	genome.wustl.edu	37	22	18222896	18222896	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	18222896	18222896	C	T	SNP	BID	ENST00000342111	human	ensembl	74_37	-1	known	silent	c.270	p.A90	0.000	NULL	pfam_BID	-	no_errors	BID	HGNC	ENSG00000015475	tier1	-	-	75	0	0.00	27	16	37.21
BLK	0	genome.wustl.edu	37	8	11400805	11400805	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	11400805	11400805	C	-	DEL	BLK	ENST00000259089	human	ensembl	74_37	+1	known	frame_shift_del	c.72	p.L26fs	0.906	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	BLK	HGNC	ENSG00000136573	tier1			41	0	0.00	34	3	8.11
BLNK	0	genome.wustl.edu	37	10	97975102	97975102	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	97975102	97975102	G	A	SNP	BLNK	ENST00000224337	human	ensembl	74_37	-1	known	silent	c.651	p.P217	0.000	NULL	pfam_SH2,smart_SH2,pfscan_SH2	-	no_errors	BLNK	HGNC	ENSG00000095585	tier1	-	-	135	0	0.00	92	15	14.02
BMS1P18	0	genome.wustl.edu	37	14	19889605	19889605	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	19889605	19889605	G	A	SNP	BMS1P18	ENST00000551908	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	BMS1P18	HGNC	ENSG00000215394	tier1	-	-	42	0	0.00	33	6	15.38
BNC2	0	genome.wustl.edu	37	9	16436056	16436056	+	Silent	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	16436056	16436056	A	T	SNP	BNC2	ENST00000380672	human	ensembl	74_37	-1	known	silent	c.2136	p.T712	0.358	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC2	HGNC	ENSG00000173068	tier1	-	-	89	0	0.00	49	18	26.87
BNIP3	0	genome.wustl.edu	37	10	133787443	133787443	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	133787443	133787443	G	T	SNP	BNIP3	ENST00000368636	human	ensembl	74_37	-1	known	silent	c.51	p.S17	1.000	pfam_BNIP3	pfam_BNIP3	-	no_errors	BNIP3	HGNC	ENSG00000176171	tier1	-	-	74	0	0.00	33	24	42.11
BOC	0	genome.wustl.edu	37	3	112997656	112997656	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	112997656	112997656	C	T	SNP	BOC	ENST00000497495	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	BOC	HGNC	ENSG00000144857	tier1	-	-	75	0	0.00	69	12	14.81
BOD1L1	0	genome.wustl.edu	37	4	13601800	13601800	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	13601800	13601800	G	A	SNP	BOD1L1	ENST00000040738	human	ensembl	74_37	-1	known	nonsense	c.6724	p.R2242*	0.000	NULL	NULL	-	no_errors	BOD1L1	HGNC	ENSG00000038219	tier1	-	-	58	0	0.00	45	9	16.67
BOLA1	0	genome.wustl.edu	37	1	149871915	149871915	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	149871915	149871915	C	T	SNP	BOLA1	ENST00000369150	human	ensembl	74_37	+1	known	silent	c.303	p.V101	0.722	pfam_BolA,superfamily_BolA	pfam_BolA,superfamily_BolA	-	no_errors	BOLA1	HGNC	ENSG00000178096	tier1	rs149389122	-	53	0	0.00	39	12	23.53
BPIFB4	0	genome.wustl.edu	37	20	31671214	31671214	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	31671214	31671214	C	-	DEL	BPIFB4	ENST00000375483	human	ensembl	74_37	+1	known	frame_shift_del	c.211	p.P73fs	0.030	NULL	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB4	HGNC	ENSG00000186191	tier1			48	0	0.00	22	7	24.14
BRD8	0	genome.wustl.edu	37	5	137495862	137495862	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	137495862	137495862	G	A	SNP	BRD8	ENST00000254900	human	ensembl	74_37	-1	known	nonsense	c.2428	p.Q810*	1.000	superfamily_Bromodomain,smart_Bromodomain	pfam_Bromodomain,superfamily_Bromodomain,superfamily_Peptidase_M20_dimer,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD8	HGNC	ENSG00000112983	tier1	-	-	46	0	0.00	41	5	10.87
BRINP3	0	genome.wustl.edu	37	1	190067209	190067209	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	190067209	190067209	T	C	SNP	BRINP3	ENST00000367462	human	ensembl	74_37	-1	known	missense	c.2240	p.Q747R	1.000	NULL	pfam_MACPF,smart_MACPF	-	no_errors	BRINP3	HGNC	ENSG00000162670				14	0	0.00	9	2	18.18
BRWD1	0	genome.wustl.edu	37	21	40619643	40619643	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	40619643	40619643	G	A	SNP	BRWD1	ENST00000333229	human	ensembl	74_37	-1	known	missense	c.2465	p.S822L	1.000	NULL	pfam_WD40_repeat,pfam_Bromodomain,superfamily_WD40_repeat_dom,superfamily_Bromodomain,smart_WD40_repeat,smart_Bromodomain,pfscan_Bromodomain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Bromodomain	-	no_errors	BRWD1	HGNC	ENSG00000185658	tier1	-	-	55	0	0.00	57	19	25.00
BSG	0	genome.wustl.edu	37	19	581348	581348	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	581348	581348	G	A	SNP	BSG	ENST00000333511	human	ensembl	74_37	+1	known	missense	c.826	p.V276M	0.042	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	BSG	HGNC	ENSG00000172270	tier1	-	-	77	0	0.00	68	4	5.56
BTAF1	0	genome.wustl.edu	37	10	93756247	93756247	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	93756247	93756247	T	-	DEL	BTAF1	ENST00000265990	human	ensembl	74_37	+1	known	frame_shift_del	c.3431	p.L1146fs	1.000	superfamily_ARM-type_fold	pfam_DUF3535,pfam_SNF2_N,pfam_HEAT,pfam_Helicase_C,superfamily_ARM-type_fold,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	BTAF1	HGNC	ENSG00000095564	tier1			54	0	0.00	29	11	27.50
BTBD1	0	genome.wustl.edu	37	15	83699022	83699022	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	83699022	83699022	A	G	SNP	BTBD1	ENST00000261721	human	ensembl	74_37	-1	known	silent	c.921	p.F307	0.994	NULL	pfam_PHR,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,pfscan_BTB/POZ-like	-	no_errors	BTBD1	HGNC	ENSG00000064726	tier1	-	-	46	0	0.00	33	5	13.16
C10orf112	0	genome.wustl.edu	37	10	19612935	19612935	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	19612935	19612935	C	T	SNP	C10orf112	ENST00000454679	human	ensembl	74_37	+1	known	silent	c.1365	p.D455	0.812	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_MAM_dom,pfam_LDrepeatLR_classA_rpt,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_MAM_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,prints_LDrepeatLR_classA_rpt,prints_MAM_dom	-	no_errors	C10orf112	HGNC	ENSG00000204740	tier1	-	-	70	0	0.00	51	6	10.53
C10orf90	0	genome.wustl.edu	37	10	128193531	128193531	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	128193531	128193531	G	A	SNP	C10orf90	ENST00000544758	human	ensembl	74_37	-1	known	missense	c.529	p.R177C	0.000	NULL	NULL	-	no_errors	C10orf90	HGNC	ENSG00000154493	tier1	-	-	31	0	0.00	33	7	17.50
C11orf89	0	genome.wustl.edu	37	11	1911130	1911130	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	1911130	1911130	G	A	SNP	C11orf89	ENST00000391480	human	ensembl	74_37	-1	known	missense	c.685	p.R229C	0.966	NULL	NULL	-	no_errors	C11orf89	HGNC	ENSG00000184682	tier1	-	-	86	0	0.00	60	22	26.83
C14orf182	0	genome.wustl.edu	37	14	50470550	50470550	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	50470550	50470550	T	-	DEL	C14orf182	ENST00000529902	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C14orf182	HGNC	ENSG00000214900	tier1			41	0	0.00	27	11	28.95
C15orf41	0	genome.wustl.edu	37	15	36984338	36984338	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	36984338	36984338	C	T	SNP	C15orf41	ENST00000437989	human	ensembl	74_37	+1	known	silent	c.438	p.N146	0.520	NULL	NULL	-	no_errors	C15orf41	HGNC	ENSG00000186073	tier1	-	-	49	0	0.00	54	9	14.29
C17orf62	0	genome.wustl.edu	37	17	80401904	80401904	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	80401904	80401904	G	A	SNP	C17orf62	ENST00000336995	human	ensembl	74_37	-1	known	missense	c.95	p.P32L	0.003	NULL	NULL	-	no_errors	C17orf62	HGNC	ENSG00000178927	tier1	-	-	88	0	0.00	91	16	14.95
C17orf74	0	genome.wustl.edu	37	17	7329696	7329696	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	7329696	7329696	G	A	SNP	C17orf74	ENST00000333870	human	ensembl	74_37	+1	known	missense	c.386	p.R129H	0.000	NULL	NULL	-	no_errors	C17orf74	HGNC	ENSG00000184560	tier1	-	-	58	0	0.00	33	11	23.91
C18orf25	0	genome.wustl.edu	37	18	43843065	43843065	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	43843065	43843065	G	A	SNP	C18orf25	ENST00000282059	human	ensembl	74_37	+1	known	missense	c.1196	p.R399H	1.000	NULL	NULL	-	no_errors	C18orf25	HGNC	ENSG00000152242				49	0	0.00	37	2	5.13
C19orf70	0	genome.wustl.edu	37	19	5679654	5679654	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	5679654	5679654	G	-	DEL	C19orf70	ENST00000309324	human	ensembl	74_37	-1	known	frame_shift_del	c.150	p.A51fs	0.000	NULL	NULL	-	no_errors	C19orf70	HGNC	ENSG00000174917	tier1			42	0	0.00	38	11	22.45
C1QC	0	genome.wustl.edu	37	1	22973962	22973962	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	22973962	22973962	G	A	SNP	C1QC	ENST00000374637	human	ensembl	74_37	+1	known	missense	c.424	p.A142T	0.002	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QC	HGNC	ENSG00000159189	tier1	rs147904988	-	48	0	0.00	47	11	18.97
C1QTNF9	0	genome.wustl.edu	37	13	24895248	24895248	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	24895248	24895248	G	A	SNP	C1QTNF9	ENST00000332018	human	ensembl	74_37	+1	known	missense	c.344	p.R115Q	0.001	pfam_Collagen	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF9	HGNC	ENSG00000240654	tier1	-	-	53	0	0.00	41	8	16.33
C1orf101	0	genome.wustl.edu	37	1	244735907	244735908	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	244735907	244735908	-	T	INS	C1orf101	ENST00000366531	human	ensembl	74_37	+1	known	frame_shift_ins	c.1330_1331	p.Y446fs	0.000:0.000	NULL	NULL	-	no_errors	C1orf101	HGNC	ENSG00000179397	tier1			82	0	0.00	61	26	29.89
C1orf101	0	genome.wustl.edu	37	1	244769091	244769091	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	244769091	244769091	G	T	SNP	C1orf101	ENST00000366531	human	ensembl	74_37	+1	known	missense	c.1945	p.A649S	0.006	NULL	NULL	-	no_errors	C1orf101	HGNC	ENSG00000179397	tier1	-	-	76	0	0.00	74	4	5.13
C1orf127	0	genome.wustl.edu	37	1	11008750	11008750	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	11008750	11008750	G	A	SNP	C1orf127	ENST00000377004	human	ensembl	74_37	-1	known	missense	c.1442	p.T481M	0.000	NULL	superfamily_DNA-bd_dom_put	-	no_errors	C1orf127	HGNC	ENSG00000175262	tier1	-	-	98	0	0.00	69	36	34.29
C1orf61	0	genome.wustl.edu	37	1	156374433	156374433	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	156374433	156374433	T	-	DEL	C1orf61	ENST00000488498	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	C1orf61	HGNC	ENSG00000125462	tier1			33	0	0.00	14	5	26.32
C20orf203	0	genome.wustl.edu	37	20	31238590	31238590	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	31238590	31238590	G	-	DEL	C20orf203	ENST00000360785	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	C20orf203	HGNC	ENSG00000198547	tier1			70	0	0.00	43	10	18.87
C22orf15	0	genome.wustl.edu	37	22	24106534	24106534	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	24106534	24106534	G	A	SNP	C22orf15	ENST00000402217	human	ensembl	74_37	+1	known	missense	c.200	p.G67D	0.003	NULL	superfamily_Ferritin-like_SF	-	no_errors	C22orf15	HGNC	ENSG00000169314				22	0	0.00	12	4	25.00
C22orf24	0	genome.wustl.edu	37	22	32334105	32334105	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	32334105	32334105	A	-	DEL	C22orf24	ENST00000543051	human	ensembl	74_37	-1	known	frame_shift_del	c.149	p.F50fs	0.000	NULL	NULL	-	no_errors	C22orf24	HGNC	ENSG00000128254	tier1			45	0	0.00	44	9	16.98
C2orf16	0	genome.wustl.edu	37	2	27804744	27804744	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	27804744	27804744	C	T	SNP	C2orf16	ENST00000408964	human	ensembl	74_37	+1	known	missense	c.5305	p.P1769S	0.000	NULL	NULL	-	no_errors	C2orf16	HGNC	ENSG00000221843	tier1	-	-	110	0	0.00	83	22	20.95
C3	0	genome.wustl.edu	37	19	6718124	6718124	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	6718124	6718124	G	A	SNP	C3	ENST00000245907	human	ensembl	74_37	-1	known	missense	c.485	p.T162M	0.222	pfam_A2M_N	pfam_A2M_comp,pfam_A-macroglobulin_rcpt-bd,pfam_Macroglobln_a2,pfam_Netrin_module_non-TIMP,pfam_A2M_N_2,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_TIMP-like_OB-fold,superfamily_A-macroglobulin_rcpt-bd,superfamily_Anaphylatoxin_comp_syst,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,prints_Anaphylatoxn_comp_syst_dom,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain	-	no_errors	C3	HGNC	ENSG00000125730				39	0	0.00	32	3	8.57
C3orf55	0	genome.wustl.edu	37	3	157261261	157261261	+	RNA	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	157261261	157261261	T	G	SNP	C3orf55	ENST00000498159	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	C3orf55	HGNC	ENSG00000174899	tier1	-	-	44	0	0.00	30	4	11.76
C3orf56	0	genome.wustl.edu	37	3	126915945	126915945	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	126915945	126915945	C	A	SNP	C3orf56	ENST00000398112	human	ensembl	74_37	+1	known	silent	c.417	p.S139	0.000	NULL	NULL	-	no_errors	C3orf56	HGNC	ENSG00000214324				115	0	0.00	74	4	5.13
C3orf70	0	genome.wustl.edu	37	3	184870595	184870595	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	184870595	184870595	G	A	SNP	C3orf70	ENST00000335012	human	ensembl	74_37	-1	known	missense	c.17	p.S6L	0.804	NULL	NULL	-	no_errors	C3orf70	HGNC	ENSG00000187068	tier1	-	-	27	0	0.00	23	8	25.81
C4orf19	0	genome.wustl.edu	37	4	37592205	37592205	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	37592205	37592205	A	G	SNP	C4orf19	ENST00000284437	human	ensembl	74_37	+1	known	silent	c.528	p.V176	0.000	NULL	NULL	-	no_errors	C4orf19	HGNC	ENSG00000154274	tier1	-	-	23	0	0.00	23	5	17.86
C4orf21	0	genome.wustl.edu	37	4	113540483	113540483	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	113540483	113540483	C	T	SNP	C4orf21	ENST00000505019	human	ensembl	74_37	-1	known	missense	c.715	p.A239T	0.000	NULL	pfam_DUF2439,pfam_Znf_GRF,superfamily_P-loop_NTPase	-	no_errors	C4orf21	HGNC	ENSG00000138658	tier1	-	-	44	0	0.00	30	15	33.33
C4orf22	0	genome.wustl.edu	37	4	81791254	81791254	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	81791254	81791254	A	-	DEL	C4orf22	ENST00000508675	human	ensembl	74_37	+1	known	frame_shift_del	c.492	p.R167fs	0.769	NULL	NULL	-	no_errors	C4orf22	HGNC	ENSG00000197826	tier1			38	0	0.00	30	6	16.67
C5orf20	0	genome.wustl.edu	37	5	134782253	134782253	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	134782253	134782253	A	T	SNP	C5orf20	ENST00000503143	human	ensembl	74_37	-1	known	missense	c.546	p.D182E	0.000	NULL	NULL	-	no_errors	C5orf20	HGNC	ENSG00000251380	tier1	-	-	48	0	0.00	48	5	9.43
C5orf30	0	genome.wustl.edu	37	5	102611913	102611913	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	102611913	102611913	C	T	SNP	C5orf30	ENST00000319933	human	ensembl	74_37	+1	known	missense	c.293	p.A98V	0.007	NULL	NULL	-	no_errors	C5orf30	HGNC	ENSG00000181751	tier1	-	-	21	0	0.00	20	6	23.08
C5orf42	0	genome.wustl.edu	37	5	37224365	37224365	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	37224365	37224365	G	T	SNP	C5orf42	ENST00000425232	human	ensembl	74_37	-1	known	silent	c.2571	p.I857	0.132	NULL	superfamily_Quino_amine_DH_bsu	-	no_errors	C5orf42	HGNC	ENSG00000197603	tier1	-	-	61	0	0.00	49	11	18.33
C5orf45	0	genome.wustl.edu	37	5	179264366	179264366	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	179264366	179264366	C	T	SNP	C5orf45	ENST00000523267	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	C5orf45	HGNC	ENSG00000161010	tier1	-	-	44	0	0.00	38	16	29.63
C5orf48	0	genome.wustl.edu	37	5	125971900	125971900	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	125971900	125971900	G	T	SNP	C5orf48	ENST00000357147	human	ensembl	74_37	+1	known	silent	c.372	p.V124	0.996	NULL	NULL	-	no_errors	C5orf48	HGNC	ENSG00000196900				28	0	0.00	43	3	6.52
C6orf132	0	genome.wustl.edu	37	6	42074305	42074306	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	42074305	42074306	-	G	INS	C6orf132	ENST00000341865	human	ensembl	74_37	-1	putative	frame_shift_ins	c.1345_1344	p.S448fs	0.842:0.850	NULL	NULL	-	no_errors	C6orf132	HGNC	ENSG00000188112	tier1			49	0	0.00	28	5	15.15
C7orf63	0	genome.wustl.edu	37	7	89884764	89884764	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	89884764	89884764	C	A	SNP	C7orf63	ENST00000389297	human	ensembl	74_37	+1	known	missense	c.148	p.R50S	0.209	NULL	superfamily_ARM-type_fold	-	no_errors	C7orf63	HGNC	ENSG00000105792	tier1	-	-	47	0	0.00	59	4	6.35
C9orf135	0	genome.wustl.edu	37	9	72435881	72435881	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	72435881	72435881	G	A	SNP	C9orf135	ENST00000377197	human	ensembl	74_37	+1	known	missense	c.86	p.R29H	1.000	NULL	NULL	-	no_errors	C9orf135	HGNC	ENSG00000204711	tier1	-	-	29	0	0.00	33	11	25.00
C9orf142	0	genome.wustl.edu	37	9	139887244	139887244	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	139887244	139887244	G	A	SNP	C9orf142	ENST00000468484	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	C9orf142	HGNC	ENSG00000148362	tier1	-	-	62	0	0.00	44	14	24.14
C9orf173	0	genome.wustl.edu	37	9	140147122	140147122	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	140147122	140147122	G	A	SNP	C9orf173	ENST00000388931	human	ensembl	74_37	+1	known	silent	c.501	p.S167	0.071	NULL	NULL	-	no_errors	C9orf173	HGNC	ENSG00000197768				13	0	0.00	8	5	38.46
C9orf91	0	genome.wustl.edu	37	9	117389249	117389249	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	117389249	117389249	T	G	SNP	C9orf91	ENST00000374049	human	ensembl	74_37	+1	known	missense	c.290	p.I97S	1.000	NULL	NULL	-	no_errors	C9orf91	HGNC	ENSG00000157693	tier1	-	-	46	0	0.00	50	6	10.71
CA1	0	genome.wustl.edu	37	8	86250552	86250552	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	86250552	86250552	G	A	SNP	CA1	ENST00000256119	human	ensembl	74_37	-1	known	missense	c.164	p.A55V	0.061	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA1	HGNC	ENSG00000133742				82	0	0.00	88	5	5.38
CA14	0	genome.wustl.edu	37	1	150236993	150236995	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	150236993	150236995	GAA	-	DEL	CA14	ENST00000369111	human	ensembl	74_37	+1	known	in_frame_del	c.948_950	p.K318in_frame_del	1.000:1.000:1.000	NULL	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA14	HGNC	ENSG00000118298	tier1			54	0	0.00	31	8	20.51
CAB39L	0	genome.wustl.edu	37	13	49957037	49957037	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	49957037	49957037	T	-	DEL	CAB39L	ENST00000347776	human	ensembl	74_37	-1	known	frame_shift_del	c.10	p.M4fs	1.000	NULL	pfam_Mo25,superfamily_ARM-type_fold	-	no_errors	CAB39L	HGNC	ENSG00000102547	tier1			123	0	0.00	87	29	25.00
CABIN1	0	genome.wustl.edu	37	22	24447362	24447362	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	24447362	24447362	A	-	DEL	CABIN1	ENST00000263119	human	ensembl	74_37	+1	known	frame_shift_del	c.732	p.K246fs	0.949	NULL	pfam_MEF2_binding,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CABIN1	HGNC	ENSG00000099991	tier1			76	0	0.00	60	12	16.67
CACNA1E	0	genome.wustl.edu	37	1	181765945	181765945	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	181765945	181765945	G	A	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	missense	c.6350	p.R2117H	0.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	tier1	-	-	34	0	0.00	20	5	20.00
CACNA1H	0	genome.wustl.edu	37	16	1254304	1254304	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	1254304	1254304	G	A	SNP	CACNA1H	ENST00000348261	human	ensembl	74_37	+1	known	missense	c.2297	p.R766K	0.000	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_PKD_2	-	no_errors	CACNA1H	HGNC	ENSG00000196557	tier1	-	-	47	0	0.00	43	6	12.24
CACNA1H	0	genome.wustl.edu	37	16	1259364	1259364	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	1259364	1259364	C	T	SNP	CACNA1H	ENST00000348261	human	ensembl	74_37	+1	known	silent	c.3696	p.I1232	0.977	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_PKD_2	-	no_errors	CACNA1H	HGNC	ENSG00000196557	tier1	-	-	59	0	0.00	41	12	22.64
CACNA1I	0	genome.wustl.edu	37	22	40060801	40060801	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	40060801	40060801	G	A	SNP	CACNA1I	ENST00000336649	human	ensembl	74_37	+1	known	missense	c.3742	p.V1248M	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1I	HGNC	ENSG00000100346	tier1	-	-	45	0	0.00	43	13	23.21
CACNA2D1	0	genome.wustl.edu	37	7	81637040	81637040	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	81637040	81637040	C	T	SNP	CACNA2D1	ENST00000356253	human	ensembl	74_37	-1	known	silent	c.1395	p.P465	1.000	pfam_Cache_domain	pfam_VDCC_a2/dsu,pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D1	HGNC	ENSG00000153956	tier1	-	-	83	0	0.00	68	28	28.87
CACNA2D3	0	genome.wustl.edu	37	3	54798246	54798247	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	54798246	54798247	-	T	INS	CACNA2D3	ENST00000288197	human	ensembl	74_37	+1	known	frame_shift_ins	c.1248_1249	p.T418fs	0.225:0.999	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D3	HGNC	ENSG00000157445	tier1			65	0	0.00	64	13	16.88
CACNG6	0	genome.wustl.edu	37	19	54502908	54502908	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	54502908	54502908	G	A	SNP	CACNG6	ENST00000252729	human	ensembl	74_37	+1	known	missense	c.427	p.V143M	0.454	prints_Claudin	prints_VDCC_g6su,prints_VDCC_gsu,prints_Claudin	-	no_errors	CACNG6	HGNC	ENSG00000130433	tier1	-	-	47	0	0.00	21	10	32.26
CACNG6	0	genome.wustl.edu	37	19	54496175	54496175	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	54496175	54496175	G	A	SNP	CACNG6	ENST00000252729	human	ensembl	74_37	+1	known	missense	c.44	p.R15Q	0.972	prints_VDCC_g6su	prints_VDCC_g6su,prints_VDCC_gsu,prints_Claudin	-	no_errors	CACNG6	HGNC	ENSG00000130433				9	0	0.00	9	5	35.71
CAD	0	genome.wustl.edu	37	2	27455420	27455420	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	27455420	27455420	T	C	SNP	CAD	ENST00000264705	human	ensembl	74_37	+1	known	missense	c.2750	p.L917P	1.000	pfam_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_lsu_oligo,tigrfam_CarbamoylP_synth_lsu	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_Asp/Orn_carbamoyltranf_P-bd,pfam_GATASE,pfam_Asp_carbamoyltransf_Asp/Orn-bd,pfam_CarbamoylP_synth_lsu_oligo,pfam_CarbamoylP_synth_lsu_N,pfam_ATP-grasp_carboxylate-amine,pfam_MGS-like_dom,pfam_Dala_Dala_lig_C,pfam_Amidohydro_1,superfamily_Asp/Orn_carbamoylTrfase,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,superfamily_Metal-dep_hydrolase_composite,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,prints_Asp_carbamoyltransf,prints_Asp/Orn_carbamoylTrfase,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu,tigrfam_Asp_carbamoyltransf	-	no_errors	CAD	HGNC	ENSG00000084774	tier1	-	-	58	0	0.00	38	6	13.64
CALCOCO1	0	genome.wustl.edu	37	12	54107679	54107679	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	54107679	54107679	G	A	SNP	CALCOCO1	ENST00000550804	human	ensembl	74_37	-1	known	missense	c.1597	p.P533S	1.000	pfam_CoCoA	pfam_CoCoA	-	no_errors	CALCOCO1	HGNC	ENSG00000012822	tier1	-	-	52	0	0.00	15	14	48.28
CALHM1	0	genome.wustl.edu	37	10	105218338	105218338	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	105218338	105218338	C	T	SNP	CALHM1	ENST00000329905	human	ensembl	74_37	-1	known	silent	c.171	p.L57	0.999	NULL	NULL	-	no_errors	CALHM1	HGNC	ENSG00000185933	tier1	-	-	95	0	0.00	74	10	11.90
CALHM2	0	genome.wustl.edu	37	10	105209411	105209411	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	105209411	105209411	G	A	SNP	CALHM2	ENST00000260743	human	ensembl	74_37	-1	known	silent	c.288	p.A96	0.340	NULL	NULL	-	no_errors	CALHM2	HGNC	ENSG00000138172	tier1	-	-	45	0	0.00	41	5	10.87
CAMK2A	0	genome.wustl.edu	37	5	149624735	149624735	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	149624735	149624735	C	T	SNP	CAMK2A	ENST00000398376	human	ensembl	74_37	-1	known	missense	c.973	p.D325N	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ca/CaM-dep_prot_kinase-assoc,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMK2A	HGNC	ENSG00000070808	tier1	-	-	45	0	0.00	41	17	29.31
CAMKK2	0	genome.wustl.edu	37	12	121683003	121683003	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	121683003	121683003	T	C	SNP	CAMKK2	ENST00000324774	human	ensembl	74_37	-1	known	missense	c.1493	p.N498S	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMKK2	HGNC	ENSG00000110931	tier1	-	-	26	0	0.00	25	6	19.35
CAMKV	0	genome.wustl.edu	37	3	49898889	49898889	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	49898889	49898889	C	T	SNP	CAMKV	ENST00000477224	human	ensembl	74_37	-1	known	missense	c.424	p.V142M	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMKV	HGNC	ENSG00000164076	tier1	-	-	23	0	0.00	34	5	12.82
CAMSAP1	0	genome.wustl.edu	37	9	138710463	138710463	+	Splice_Site	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	138710463	138710463	C	A	SNP	CAMSAP1	ENST00000409386	human	ensembl	74_37	-1	known	splice_site	c.3993-1	e14-1	1.000	-	-	-	no_errors	CAMSAP1	HGNC	ENSG00000130559	tier1	-	-	41	0	0.00	23	6	20.69
CAMSAP2	0	genome.wustl.edu	37	1	200709046	200709046	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	200709046	200709046	A	-	DEL	CAMSAP2	ENST00000236925	human	ensembl	74_37	+1	known	frame_shift_del	c.91	p.I32fs	1.000	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP2	HGNC	ENSG00000118200	tier1			59	0	0.00	40	8	16.67
CAMSAP2	0	genome.wustl.edu	37	1	200816338	200816339	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	200816338	200816339	0	G	INS	CAMSAP2	ENST00000236925	human	ensembl	74_37	+1	known	frame_shift_ins	c.1143_1144	p.E382fs	0.550:0.591	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP2	HGNC	ENSG00000118200				62	0	0.00	74	10	11.90
CAMTA1	0	genome.wustl.edu	37	1	7723713	7723714	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	7723713	7723714	-	C	INS	CAMTA1	ENST00000303635	human	ensembl	74_37	+1	known	frame_shift_ins	c.1106_1107	p.D371fs	1.000:1.000	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA1	HGNC	ENSG00000171735	tier1			57	0	0.00	39	5	11.36
CAPNS1	0	genome.wustl.edu	37	19	36633868	36633868	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	36633868	36633868	C	T	SNP	CAPNS1	ENST00000588780	human	ensembl	74_37	+1	known	missense	c.391	p.H131Y	1.000	NULL	pfscan_EF_hand_dom	-	no_errors	CAPNS1	HGNC	ENSG00000126247	tier1	-	-	46	0	0.00	15	7	31.82
CARD14	0	genome.wustl.edu	37	17	78163639	78163639	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	78163639	78163639	C	T	SNP	CARD14	ENST00000344227	human	ensembl	74_37	+1	known	missense	c.931	p.R311W	0.963	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,superfamily_PDZ,pfscan_CARD,pfscan_PDZ,pfscan_Guanylate_kin-like	-	no_errors	CARD14	HGNC	ENSG00000141527	tier1	-	-	91	0	0.00	66	17	20.24
CARD14	0	genome.wustl.edu	37	17	78176100	78176100	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	78176100	78176100	C	T	SNP	CARD14	ENST00000392434	human	ensembl	74_37	+1	known	missense	c.1262	p.T421M	0.089	NULL	superfamily_PDZ	-	no_errors	CARD14	HGNC	ENSG00000141527	tier1	-	-	41	0	0.00	44	8	15.38
CARNS1	0	genome.wustl.edu	37	11	67190856	67190856	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	67190856	67190856	T	C	SNP	CARNS1	ENST00000445895	human	ensembl	74_37	+1	known	missense	c.1637	p.V546A	1.000	superfamily_PreATP-grasp_dom	superfamily_PreATP-grasp_dom,superfamily_TIL_dom,pfscan_ATP-grasp	-	no_errors	CARNS1	HGNC	ENSG00000172508	tier1	-	-	37	0	0.00	42	6	12.50
CARS	0	genome.wustl.edu	37	11	3028167	3028167	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	3028167	3028167	G	A	SNP	CARS	ENST00000380525	human	ensembl	74_37	-1	known	silent	c.2091	p.S697	0.598	superfamily_tRNAsynth_1a_anticodon-bd,tigrfam_Cys-tRNA-ligase	pfam_Cys-tRNA/MSH_ligase,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Glutathione-S-Trfase_C-like,prints_Cys-tRNA/MSH_ligase,tigrfam_Cys-tRNA-ligase	-	no_errors	CARS	HGNC	ENSG00000110619				25	0	0.00	9	2	18.18
CASC1	0	genome.wustl.edu	37	12	25308344	25308344	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	25308344	25308344	A	T	SNP	CASC1	ENST00000395987	human	ensembl	74_37	-1	known	missense	c.201	p.D67E	0.993	NULL	pfam_Casc1_domain,prints_Casc1	-	no_errors	CASC1	HGNC	ENSG00000118307	tier1	-	-	28	0	0.00	25	5	16.67
CASC5	0	genome.wustl.edu	37	15	40913213	40913213	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	40913213	40913213	G	A	SNP	CASC5	ENST00000346991	human	ensembl	74_37	+1	known	missense	c.829	p.A277T	0.003	NULL	NULL	-	no_errors	CASC5	HGNC	ENSG00000137812	tier1	-	-	57	0	0.00	52	4	7.14
CATSPER1	0	genome.wustl.edu	37	11	65792817	65792817	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	65792817	65792817	C	T	SNP	CATSPER1	ENST00000312106	human	ensembl	74_37	-1	known	missense	c.1034	p.R345H	0.000	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel	-	no_errors	CATSPER1	HGNC	ENSG00000175294	tier1	-	-	46	0	0.00	45	21	31.82
CATSPER2	0	genome.wustl.edu	37	15	43931160	43931160	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	43931160	43931160	C	T	SNP	CATSPER2	ENST00000321596	human	ensembl	74_37	-1	known	missense	c.784	p.V262I	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom	-	no_errors	CATSPER2	HGNC	ENSG00000166762	tier1	-	-	59	0	0.00	53	9	14.52
CATSPER2P1	0	genome.wustl.edu	37	15	44028271	44028271	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	44028271	44028271	G	A	SNP	CATSPER2P1	ENST00000381680	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CATSPER2P1	HGNC	ENSG00000205771	tier1	-	-	37	0	0.00	21	7	25.00
CATSPER3	0	genome.wustl.edu	37	5	134347238	134347238	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	134347238	134347238	G	A	SNP	CATSPER3	ENST00000282611	human	ensembl	74_37	+1	known	silent	c.1122	p.V374	0.000	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel	-	no_errors	CATSPER3	HGNC	ENSG00000152705	tier1	-	-	61	0	0.00	36	6	14.29
CBFA2T3	0	genome.wustl.edu	37	16	88958316	88958316	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	88958316	88958316	G	A	SNP	CBFA2T3	ENST00000268679	human	ensembl	74_37	-1	known	missense	c.685	p.R229W	1.000	pfam_TAFH_NHR1,smart_TAFH_NHR1,pfscan_TAFH_NHR1,prints_ETO	pfam_NHR2,pfam_TAFH_NHR1,pfam_Znf_MYND,smart_TAFH_NHR1,pfscan_TAFH_NHR1,pfscan_Znf_MYND,prints_ETO,prints_MTG16	-	no_errors	CBFA2T3	HGNC	ENSG00000129993	tier1	-	-	44	0	0.00	26	11	29.73
CBLB	0	genome.wustl.edu	37	3	105377882	105377882	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	105377882	105377882	C	T	SNP	CBLB	ENST00000264122	human	ensembl	74_37	-1	known	missense	c.2881	p.E961K	1.000	pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	pfam_Adaptor_Cbl_N_hlx,pfam_Adaptor_Cbl_SH2-like,pfam_Adaptor_Cbl_EF_hand-like,pfam_Znf_C3HC4_RING-type,pfam_UBA/Ts_N,superfamily_Adaptor_Cbl_N_hlx,superfamily_UBA-like,smart_Znf_RING,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_RING	-	no_errors	CBLB	HGNC	ENSG00000114423	tier1	-	-	75	0	0.00	38	21	35.59
CBLN1	0	genome.wustl.edu	37	16	49315200	49315200	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	49315200	49315200	G	A	SNP	CBLN1	ENST00000219197	human	ensembl	74_37	-1	known	silent	c.177	p.S59	1.000	smart_C1q,pfscan_C1q	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	CBLN1	HGNC	ENSG00000102924	tier1	-	-	54	0	0.00	62	10	13.89
CBX6	0	genome.wustl.edu	37	22	39262968	39262968	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	39262968	39262968	C	T	SNP	CBX6	ENST00000407418	human	ensembl	74_37	-1	known	missense	c.485	p.R162H	1.000	NULL	pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,pfscan_Chromo_domain/shadow,prints_Chromo_dom_subgr	-	no_errors	CBX6	HGNC	ENSG00000183741	tier1	-	-	69	0	0.00	30	9	23.08
CC2D1B	0	genome.wustl.edu	37	1	52826167	52826167	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	52826167	52826167	G	A	SNP	CC2D1B	ENST00000371586	human	ensembl	74_37	-1	known	nonsense	c.532	p.R178*	0.234	smart_DM14	pfam_C2_dom,superfamily_C2_dom,smart_DM14,smart_C2_dom	-	no_errors	CC2D1B	HGNC	ENSG00000154222				83	0	0.00	69	5	6.76
CCAR2	0	genome.wustl.edu	37	8	22470553	22470553	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	22470553	22470553	G	A	SNP	CCAR2	ENST00000308511	human	ensembl	74_37	+1	known	missense	c.608	p.R203H	1.000	NULL	superfamily_NA-bd_OB-fold	-	no_errors	CCAR2	HGNC	ENSG00000158941	tier1	-	-	79	0	0.00	70	9	11.39
CCDC106	0	genome.wustl.edu	37	19	56163825	56163825	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	56163825	56163825	T	C	SNP	CCDC106	ENST00000308964	human	ensembl	74_37	+1	known	missense	c.556	p.Y186H	1.000	NULL	NULL	-	no_errors	CCDC106	HGNC	ENSG00000173581	tier1	-	-	81	0	0.00	65	8	10.96
CCDC108	0	genome.wustl.edu	37	2	219868931	219868933	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	219868931	219868933	CTC	-	DEL	CCDC108	ENST00000341552	human	ensembl	74_37	-1	known	in_frame_del	c.5298_5296	p.E1766in_frame_del	0.056:0.050:0.034	NULL	superfamily_PapD-like,pfscan_MSP_dom	-	no_errors	CCDC108	HGNC	ENSG00000181378	tier1			31	0	0.00	23	5	17.86
CCDC112	0	genome.wustl.edu	37	5	114607065	114607065	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	114607065	114607065	G	A	SNP	CCDC112	ENST00000379611	human	ensembl	74_37	-1	known	missense	c.1177	p.R393C	1.000	NULL	superfamily_Homeodomain-like	-	no_errors	CCDC112	HGNC	ENSG00000164221	tier1	-	-	41	0	0.00	32	14	30.43
CCDC129	0	genome.wustl.edu	37	7	31682910	31682910	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	31682910	31682910	T	C	SNP	CCDC129	ENST00000451887	human	ensembl	74_37	+1	known	silent	c.2004	p.C668	0.000	NULL	NULL	-	no_errors	CCDC129	HGNC	ENSG00000180347	tier1	-	-	25	0	0.00	18	9	33.33
CCDC129	0	genome.wustl.edu	37	7	31618022	31618022	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	31618022	31618022	G	T	SNP	CCDC129	ENST00000451887	human	ensembl	74_37	+1	known	nonsense	c.1222	p.G408*	0.007	NULL	NULL	-	no_errors	CCDC129	HGNC	ENSG00000180347				11	0	0.00	9	2	18.18
CCDC166	0	genome.wustl.edu	37	8	144789882	144789882	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	144789882	144789882	C	T	SNP	CCDC166	ENST00000542437	human	ensembl	74_37	-1	known	missense	c.398	p.R133H	1.000	NULL	NULL	-	no_errors	CCDC166	HGNC	ENSG00000255181	tier1	-	-	10	0	0.00	8	4	33.33
CCDC28A	0	genome.wustl.edu	37	6	139094843	139094843	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	139094843	139094843	G	T	SNP	CCDC28A	ENST00000332797	human	ensembl	74_37	+1	known	missense	c.32	p.G11V	0.000	NULL	NULL	-	no_errors	CCDC28A	HGNC	ENSG00000024862	tier1	-	-	158	0	0.00	136	20	12.74
CCDC39	0	genome.wustl.edu	37	3	180334382	180334382	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	180334382	180334382	T	G	SNP	CCDC39	ENST00000442201	human	ensembl	74_37	-1	known	missense	c.2508	p.K836N	0.988	NULL	superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	CCDC39	HGNC	ENSG00000145075	tier1	-	-	43	0	0.00	50	5	9.09
CCDC42	0	genome.wustl.edu	37	17	8638451	8638451	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	8638451	8638451	T	C	SNP	CCDC42	ENST00000293845	human	ensembl	74_37	-1	known	missense	c.836	p.E279G	0.000	NULL	NULL	-	no_errors	CCDC42	HGNC	ENSG00000161973				43	0	0.00	39	3	7.14
CCDC73	0	genome.wustl.edu	37	11	32675522	32675522	+	Splice_Site	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	32675522	32675522	A	G	SNP	CCDC73	ENST00000335185	human	ensembl	74_37	-1	known	splice_site	c.834+2	e10+2	1.000	-	-	-	no_errors	CCDC73	HGNC	ENSG00000186714	tier1	-	-	73	0	0.00	67	16	19.28
CCDC87	0	genome.wustl.edu	37	11	66359522	66359522	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	66359522	66359522	G	A	SNP	CCDC87	ENST00000333861	human	ensembl	74_37	-1	known	missense	c.965	p.A322V	0.998	NULL	pfam_MAP65_Ase1_PRC1	-	no_errors	CCDC87	HGNC	ENSG00000182791	tier1	-	-	32	0	0.00	17	9	34.62
CCDC91	0	genome.wustl.edu	37	12	28412316	28412316	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	28412316	28412316	G	A	SNP	CCDC91	ENST00000381259	human	ensembl	74_37	+1	known	missense	c.50	p.G17D	0.916	NULL	NULL	-	no_errors	CCDC91	HGNC	ENSG00000123106	tier1	-	-	90	0	0.00	79	7	8.14
CCDC92	0	genome.wustl.edu	37	12	124422150	124422150	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	124422150	124422150	G	A	SNP	CCDC92	ENST00000238156	human	ensembl	74_37	-1	known	missense	c.451	p.R151W	1.000	NULL	NULL	-	no_errors	CCDC92	HGNC	ENSG00000119242				39	0	0.00	35	2	5.41
CCKAR	0	genome.wustl.edu	37	4	26490891	26490891	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	26490891	26490891	C	T	SNP	CCKAR	ENST00000295589	human	ensembl	74_37	-1	known	missense	c.328	p.G110R	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Cholcskin_rcpt,prints_Gastrin_rcpt	pfam_GPCR_Rhodpsn,pfam_CholecystokininA_recpt_N,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Cholcy_rcpt_A,prints_Cholcskin_rcpt,prints_GPCR_Rhodpsn,prints_Gastrin_rcpt,prints_NPY_rcpt	-	no_errors	CCKAR	HGNC	ENSG00000163394	tier1	-	-	30	0	0.00	21	6	22.22
CCKBR	0	genome.wustl.edu	37	11	6292451	6292451	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	6292451	6292451	T	-	DEL	CCKBR	ENST00000525462	human	ensembl	74_37	+1	known	frame_shift_del	c.1229	p.L413fs	0.995	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Gastrin_rcpt,prints_Cholcskin_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	CCKBR	HGNC	ENSG00000110148	tier1			15	0	0.00	5	8	61.54
CCNB3	0	genome.wustl.edu	37	X	50052616	50052616	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	50052616	50052616	C	-	DEL	CCNB3	ENST00000276014	human	ensembl	74_37	+1	known	frame_shift_del	c.1447	p.T485fs	0.000	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNB3	HGNC	ENSG00000147082	tier1			49	0	0.00	32	2	5.88
CCNC	0	genome.wustl.edu	37	6	100006296	100006296	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	100006296	100006296	A	-	DEL	CCNC	ENST00000482541	human	ensembl	74_37	-1	putative	frame_shift_del	c.423	p.F141fs	0.007	superfamily_Cyclin-like	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNC	HGNC	ENSG00000112237	tier1			37	0	0.00	38	8	17.39
CCND1	0	genome.wustl.edu	37	11	69466017	69466017	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	69466017	69466017	C	A	SNP	CCND1	ENST00000227507	human	ensembl	74_37	+1	known	nonsense	c.855	p.C285*	1.000	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCND1	HGNC	ENSG00000110092				38	0	0.00	31	3	8.82
CCNF	0	genome.wustl.edu	37	16	2487250	2487250	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	2487250	2487250	C	T	SNP	CCNF	ENST00000397066	human	ensembl	74_37	+1	known	missense	c.467	p.P156L	1.000	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,pfam_F-box_dom,superfamily_Cyclin-like,superfamily_F-box_dom,smart_F-box_dom,smart_Cyclin-like,pfscan_F-box_dom	-	no_errors	CCNF	HGNC	ENSG00000162063	tier1	-	-	36	0	0.00	27	6	18.18
CCNL2	0	genome.wustl.edu	37	1	1326208	1326208	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	1326208	1326208	C	T	SNP	CCNL2	ENST00000400809	human	ensembl	74_37	-1	known	missense	c.697	p.V233M	1.000	pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	-	no_errors	CCNL2	HGNC	ENSG00000221978	tier1	-	-	56	0	0.00	51	6	10.34
CCR4	0	genome.wustl.edu	37	3	32995849	32995849	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	32995849	32995849	G	A	SNP	CCR4	ENST00000330953	human	ensembl	74_37	+1	known	missense	c.935	p.R312H	1.000	pfam_7TM_GPCR_olfarory/Srsx,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR4,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CXCR4,prints_ATII_rcpt,prints_Duffy_chemokine_rcpt	-	no_errors	CCR4	HGNC	ENSG00000183813	tier1	-	-	35	0	0.00	28	8	22.22
CCR7	0	genome.wustl.edu	37	17	38711212	38711212	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	38711212	38711212	C	T	SNP	CCR7	ENST00000246657	human	ensembl	74_37	-1	known	missense	c.919	p.A307T	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR7,prints_Chemokine_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR7,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Chemokine_CXCR4,prints_Chemokine_CCRL1	-	no_errors	CCR7	HGNC	ENSG00000126353	tier1	-	-	41	0	0.00	29	4	12.12
CCSER2	0	genome.wustl.edu	37	10	86185510	86185510	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	86185510	86185510	T	-	DEL	CCSER2	ENST00000372088	human	ensembl	74_37	+1	known	frame_shift_del	c.1729	p.F577fs	1.000	NULL	NULL	-	no_errors	CCSER2	HGNC	ENSG00000107771	tier1			50	0	0.00	27	9	25.00
CCT5	0	genome.wustl.edu	37	5	10256197	10256197	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	10256197	10256197	C	T	SNP	CCT5	ENST00000280326	human	ensembl	74_37	+1	known	silent	c.462	p.S154	0.005	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,tigrfam_Chap_CCT_epsi	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_epsi	-	no_errors	CCT5	HGNC	ENSG00000150753				19	0	0.00	23	3	11.54
CD1D	0	genome.wustl.edu	37	1	158152021	158152021	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	158152021	158152021	G	A	SNP	CD1D	ENST00000368171	human	ensembl	74_37	+1	known	silent	c.528	p.V176	0.000	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1D	HGNC	ENSG00000158473	tier1	-	-	48	0	0.00	36	10	21.74
CD22	0	genome.wustl.edu	37	19	35823799	35823799	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	35823799	35823799	G	A	SNP	CD22	ENST00000085219	human	ensembl	74_37	+1	known	nonsense	c.384	p.W128*	1.000	smart_Ig_sub	pfam_Immunoglobulin,pfam_Ig_I-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CD22	HGNC	ENSG00000012124	tier1	-	-	34	0	0.00	27	9	25.00
CD22	0	genome.wustl.edu	37	19	35832639	35832639	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	35832639	35832639	G	-	DEL	CD22	ENST00000085219	human	ensembl	74_37	+1	known	frame_shift_del	c.1806	p.D604fs	0.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Immunoglobulin,pfam_Ig_I-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CD22	HGNC	ENSG00000012124	tier1			42	0	0.00	17	26	60.47
CD247	0	genome.wustl.edu	37	1	167404320	167404321	+	RNA	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	167404320	167404321	-	T	INS	CD247	ENST00000483825	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CD247	HGNC	ENSG00000198821	tier1			17	0	0.00	7	2	22.22
CD247	0	genome.wustl.edu	37	1	167408611	167408611	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	167408611	167408611	C	T	SNP	CD247	ENST00000362089	human	ensembl	74_37	-1	known	silent	c.189	p.A63	0.000	pfscan_Phos_immunorcpt_sig_ITAM	pfam_Phos_immunorcpt_sig_ITAM,pfam_CR3_zeta/IgE_Fc_rcpt_gamma,smart_Phos_immunorcpt_sig_ITAM,pfscan_Phos_immunorcpt_sig_ITAM	-	no_errors	CD247	HGNC	ENSG00000198821	tier1	-	-	71	0	0.00	59	17	22.37
CD34	0	genome.wustl.edu	37	1	208062085	208062085	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	208062085	208062085	C	T	SNP	CD34	ENST00000310833	human	ensembl	74_37	-1	known	missense	c.914	p.G305D	0.923	pfam_CD34/Podocalyxin	pfam_CD34/Podocalyxin,prints_CD34	-	no_errors	CD34	HGNC	ENSG00000174059	tier1	-	-	51	0	0.00	41	6	12.77
CD36	0	genome.wustl.edu	37	7	80303352	80303352	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	80303352	80303352	A	-	DEL	CD36	ENST00000309881	human	ensembl	74_37	+1	known	frame_shift_del	c.1308	p.I438fs	0.986	pfam_CD36,prints_CD36_antigen	pfam_CD36,prints_CD36_antigen,prints_CD36	-	no_errors	CD36	HGNC	ENSG00000135218	tier1			103	0	0.00	73	12	14.12
CD93	0	genome.wustl.edu	37	20	23064944	23064944	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	23064944	23064944	G	A	SNP	CD93	ENST00000246006	human	ensembl	74_37	-1	known	missense	c.1886	p.S629F	1.000	NULL	pirsf_CD93/CD141,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_MFS_dom_general_subst_transpt,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_C-type_lectin	-	no_errors	CD93	HGNC	ENSG00000125810	tier1	-	-	41	0	0.00	34	16	32.00
CDC42BPG	0	genome.wustl.edu	37	11	64599932	64599932	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	64599932	64599932	C	A	SNP	CDC42BPG	ENST00000342711	human	ensembl	74_37	-1	known	missense	c.3055	p.A1019S	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CDC42BPG	HGNC	ENSG00000171219	tier1	-	-	58	0	0.00	58	6	9.38
CDC42BPG	0	genome.wustl.edu	37	11	64606221	64606221	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	64606221	64606221	G	A	SNP	CDC42BPG	ENST00000342711	human	ensembl	74_37	-1	known	missense	c.1030	p.R344W	0.994	superfamily_Kinase-like_dom,smart_AGC-kinase_C	pfam_Prot_kinase_dom,pfam_Citron,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CDC42BPG	HGNC	ENSG00000171219	tier1	-	-	36	0	0.00	15	7	31.82
CDCA7L	0	genome.wustl.edu	37	7	21947897	21947897	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	21947897	21947897	T	-	DEL	CDCA7L	ENST00000406877	human	ensembl	74_37	-1	known	frame_shift_del	c.532	p.T178fs	0.000	NULL	pfam_Znf-4CXXC_R1	-	no_errors	CDCA7L	HGNC	ENSG00000164649	tier1			44	0	0.00	43	8	15.69
CDH11	0	genome.wustl.edu	37	16	65038589	65038589	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	65038589	65038589	C	T	SNP	CDH11	ENST00000268603	human	ensembl	74_37	-1	known	missense	c.184	p.V62M	1.000	superfamily_Cadherin-like	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH11	HGNC	ENSG00000140937	tier1	-	-	53	0	0.00	56	7	11.11
CDH18	0	genome.wustl.edu	37	5	19473140	19473141	+	RNA	DEL	TT	TT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	19473140	19473141	TT	-	DEL	CDH18	ENST00000510297	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CDH18	HGNC	ENSG00000145526	tier1			9	0	0.00	9	2	18.18
CDH18	0	genome.wustl.edu	37	5	19483637	19483638	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	19483637	19483638	-	T	INS	CDH18	ENST00000274170	human	ensembl	74_37	-1	known	frame_shift_ins	c.1655_1654	p.R552fs	1.000:1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH18	HGNC	ENSG00000145526	tier1			35	0	0.00	24	7	22.58
CDH23	0	genome.wustl.edu	37	10	73562688	73562688	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	73562688	73562688	C	A	SNP	CDH23	ENST00000398788	human	ensembl	74_37	+1	known	silent	c.796	p.R266	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736	tier1	-	-	40	0	0.00	23	4	14.81
CDK10	0	genome.wustl.edu	37	16	89758878	89758878	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	89758878	89758878	G	A	SNP	CDK10	ENST00000353379	human	ensembl	74_37	+1	known	missense	c.439	p.V147M	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK10	HGNC	ENSG00000185324	tier1	-	-	63	0	0.00	39	8	17.02
CDK18	0	genome.wustl.edu	37	1	205499346	205499346	+	RNA	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	205499346	205499346	C	-	DEL	CDK18	ENST00000509056	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CDK18	HGNC	ENSG00000117266	tier1			67	0	0.00	67	11	14.10
CDKN2A	0	genome.wustl.edu	37	9	21971023	21971023	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	21971023	21971023	C	T	SNP	CDKN2A	ENST00000446177	human	ensembl	74_37	-1	known	missense	c.335	p.R112H	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CDKN2A	HGNC	ENSG00000147889	tier1	-	-	54	0	0.00	42	7	14.29
CDO1	0	genome.wustl.edu	37	5	115152083	115152083	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	115152083	115152083	G	A	SNP	CDO1	ENST00000250535	human	ensembl	74_37	-1	known	silent	c.12	p.T4	0.980	pfam_Cys_dOase_I	pfam_Cys_dOase_I,pfam_Cysteamine_dioxygenase,superfamily_RmlC_Cupin	-	no_errors	CDO1	HGNC	ENSG00000129596	tier1	-	-	19	0	0.00	22	4	15.38
CDRT15L2	0	genome.wustl.edu	37	17	20483254	20483254	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	20483254	20483254	G	A	SNP	CDRT15L2	ENST00000399044	human	ensembl	74_37	+1	known	silent	c.198	p.S66	0.001	NULL	NULL	-	no_errors	CDRT15L2	HGNC	ENSG00000214819	tier1	-	-	82	0	0.00	59	16	21.33
CDSN	0	genome.wustl.edu	37	6	31084700	31084700	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	31084700	31084700	G	T	SNP	CDSN	ENST00000376288	human	ensembl	74_37	-1	known	missense	c.692	p.P231H	0.891	NULL	NULL	-	no_errors	CDSN	HGNC	ENSG00000204539	tier1	-	-	55	0	0.00	49	7	12.50
CDT1	0	genome.wustl.edu	37	16	88872230	88872230	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	88872230	88872230	C	T	SNP	CDT1	ENST00000301019	human	ensembl	74_37	+1	known	missense	c.785	p.T262I	0.000	pfam_CDT1_Gemini-bd-like	pfam_CDT1_Gemini-bd-like	-	no_errors	CDT1	HGNC	ENSG00000167513	tier1	-	-	46	0	0.00	41	7	14.58
CECR1	0	genome.wustl.edu	37	22	17662461	17662461	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	17662461	17662461	C	T	SNP	CECR1	ENST00000262607	human	ensembl	74_37	-1	known	missense	c.1448	p.S483N	0.995	pfam_A/AMP_deaminase_dom,tigrfam_Ad_deam-like	pfam_A/AMP_deaminase_dom,pfam_A_deaminase_N,tigrfam_Ad_deam-like	-	no_errors	CECR1	HGNC	ENSG00000093072	tier1	-	-	38	0	0.00	22	9	29.03
CELSR3	0	genome.wustl.edu	37	3	48679345	48679345	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	48679345	48679345	C	-	DEL	CELSR3	ENST00000544264	human	ensembl	74_37	-1	known	frame_shift_del	c.8778	p.R2927fs	0.997	NULL	pfam_Cadherin,pfam_GPCR_2_secretin-like,pfam_Laminin_G,pfam_DUF3497,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR3	HGNC	ENSG00000008300	tier1			80	0	0.00	61	9	12.86
CENPI	0	genome.wustl.edu	37	X	100364892	100364892	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	100364892	100364892	C	T	SNP	CENPI	ENST00000372927	human	ensembl	74_37	+1	known	missense	c.496	p.R166C	1.000	pfam_CENP-I	pfam_CENP-I	-	no_errors	CENPI	HGNC	ENSG00000102384	tier1	-	-	83	0	0.00	28	9	24.32
CEP104	0	genome.wustl.edu	37	1	3742955	3742955	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	3742955	3742955	G	A	SNP	CEP104	ENST00000378230	human	ensembl	74_37	-1	known	missense	c.2234	p.P745L	0.010	NULL	superfamily_Galactose-bd-like,superfamily_ARM-type_fold	-	no_errors	CEP104	HGNC	ENSG00000116198	tier1	rs201407033	-	52	0	0.00	33	9	21.43
CEP152	0	genome.wustl.edu	37	15	49076223	49076223	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	49076223	49076223	A	G	SNP	CEP152	ENST00000380950	human	ensembl	74_37	-1	known	missense	c.1268	p.L423S	0.894	NULL	NULL	-	no_errors	CEP152	HGNC	ENSG00000103995	tier1	-	-	55	0	0.00	58	4	6.45
CEP164P1	0	genome.wustl.edu	37	10	45498719	45498719	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	45498719	45498719	T	C	SNP	CEP164P1	ENST00000456938	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CEP164P1	HGNC	ENSG00000226937	tier1	-	-	20	0	0.00	9	8	47.06
CEP170	0	genome.wustl.edu	37	1	243354507	243354507	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	243354507	243354507	G	T	SNP	CEP170	ENST00000366542	human	ensembl	74_37	-1	known	missense	c.921	p.H307Q	1.000	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,superfamily_Fibronectin_type3,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170	HGNC	ENSG00000143702	tier1	-	-	71	0	0.00	57	12	17.39
CEP170B	0	genome.wustl.edu	37	14	105354207	105354207	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	105354207	105354207	A	G	SNP	CEP170B	ENST00000453495	human	ensembl	74_37	+1	known	missense	c.3634	p.M1212V	0.074	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	CEP170B	HGNC	ENSG00000099814	tier1	-	-	122	0	0.00	93	15	13.89
CEP350	0	genome.wustl.edu	37	1	180063462	180063462	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	180063462	180063462	A	-	DEL	CEP350	ENST00000367607	human	ensembl	74_37	+1	known	frame_shift_del	c.8222	p.K2743fs	0.101	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain	-	no_errors	CEP350	HGNC	ENSG00000135837	tier1			57	0	0.00	31	12	27.91
CEP76	0	genome.wustl.edu	37	18	12699055	12699055	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	12699055	12699055	C	T	SNP	CEP76	ENST00000262127	human	ensembl	74_37	-1	known	missense	c.443	p.R148H	1.000	superfamily_C2_dom	superfamily_C2_dom	-	no_errors	CEP76	HGNC	ENSG00000101624	tier1	-	-	73	0	0.00	62	9	12.50
CES2	0	genome.wustl.edu	37	16	66977773	66977773	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	66977773	66977773	C	T	SNP	CES2	ENST00000317091	human	ensembl	74_37	+1	known	missense	c.1717	p.P573S	1.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES2	HGNC	ENSG00000172831	tier1	-	-	97	0	0.00	95	11	10.38
CES5A	0	genome.wustl.edu	37	16	55909120	55909120	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	55909120	55909120	C	A	SNP	CES5A	ENST00000290567	human	ensembl	74_37	-1	known	missense	c.14	p.W5L	0.310	NULL	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES5A	HGNC	ENSG00000159398	tier1	-	-	46	0	0.00	50	4	7.41
CES5AP1	0	genome.wustl.edu	37	22	23719224	23719224	+	RNA	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	23719224	23719224	C	A	SNP	CES5AP1	ENST00000424029	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	CES5AP1	HGNC	ENSG00000215478	tier1	-	-	29	0	0.00	24	5	17.24
CETN3	0	genome.wustl.edu	37	5	89701581	89701581	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	89701581	89701581	T	-	DEL	CETN3	ENST00000283122	human	ensembl	74_37	-1	known	frame_shift_del	c.189	p.A64fs	1.000	pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CETN3	HGNC	ENSG00000153140	tier1			107	0	0.00	100	20	16.67
CETP	0	genome.wustl.edu	37	16	56996989	56996989	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	56996989	56996989	C	T	SNP	CETP	ENST00000200676	human	ensembl	74_37	+1	known	silent	c.186	p.G62	0.004	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,pirsf_Cholesteryl_ester_transfer	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C,pirsf_Cholesteryl_ester_transfer	-	no_errors	CETP	HGNC	ENSG00000087237	tier1	-	-	47	0	0.00	42	7	14.29
CHAF1A	0	genome.wustl.edu	37	19	4422628	4422629	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	4422628	4422629	AG	-	DEL	CHAF1A	ENST00000301280	human	ensembl	74_37	+1	known	frame_shift_del	c.1083_1084	p.E362fs	0.362:0.964	NULL	pfam_CAF1A	-	no_errors	CHAF1A	HGNC	ENSG00000167670	tier1			40	0	0.00	35	8	18.60
CHAF1A	0	genome.wustl.edu	37	19	4433174	4433174	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	4433174	4433174	G	A	SNP	CHAF1A	ENST00000301280	human	ensembl	74_37	+1	known	missense	c.2311	p.G771S	0.000	NULL	pfam_CAF1A	-	no_errors	CHAF1A	HGNC	ENSG00000167670	tier1	-	-	147	0	0.00	136	16	10.53
CHD1	0	genome.wustl.edu	37	5	98194002	98194002	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	98194002	98194002	G	A	SNP	CHD1	ENST00000284049	human	ensembl	74_37	-1	known	missense	c.4669	p.H1557Y	0.997	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD1	HGNC	ENSG00000153922	tier1	-	-	77	0	0.00	53	17	24.29
CHD1	0	genome.wustl.edu	37	5	98210788	98210788	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	98210788	98210788	C	T	SNP	CHD1	ENST00000284049	human	ensembl	74_37	-1	known	missense	c.3428	p.G1143D	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD1	HGNC	ENSG00000153922	tier1	-	-	55	0	0.00	44	23	34.33
CHD3	0	genome.wustl.edu	37	17	7801849	7801849	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	7801849	7801849	G	A	SNP	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	missense	c.2087	p.R696H	0.997	superfamily_P-loop_NTPase	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004	tier1	-	-	35	0	0.00	25	12	32.43
CHD4	0	genome.wustl.edu	37	12	6700898	6700898	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	6700898	6700898	G	T	SNP	CHD4	ENST00000309577	human	ensembl	74_37	-1	known	missense	c.3184	p.L1062I	1.000	pfam_HDA_complex_subunit-2/3,superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_CHD_C2,pfam_DUF1086,pfam_SNF2_N,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,superfamily_Homeodomain-like,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD4	HGNC	ENSG00000111642	tier1	-	-	64	0	0.00	45	4	8.16
CHD6	0	genome.wustl.edu	37	20	40052243	40052243	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	40052243	40052243	G	A	SNP	CHD6	ENST00000373233	human	ensembl	74_37	-1	known	missense	c.4444	p.R1482C	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_BRK_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD6	HGNC	ENSG00000124177	tier1	-	-	44	0	0.00	31	11	26.19
CHD8	0	genome.wustl.edu	37	14	21868338	21868339	+	In_Frame_Ins	INS	-	-	ATA			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	21868338	21868339	-	ATA	INS	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	in_frame_ins	c.4699_4698	p.1566in_frame_insY	1.000:1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888	tier1			55	0	0.00	61	12	16.44
CHD9	0	genome.wustl.edu	37	16	53276879	53276880	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	53276879	53276880	-	A	INS	CHD9	ENST00000398510	human	ensembl	74_37	+1	known	frame_shift_ins	c.3005_3006	p.N1004fs	1.000:1.000	pfam_SNF2_N,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200	tier1			25	0	0.00	27	7	20.59
CHIC1	0	genome.wustl.edu	37	X	72783226	72783226	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	72783226	72783226	T	C	SNP	CHIC1	ENST00000373502	human	ensembl	74_37	+1	known	missense	c.106	p.S36P	0.993	NULL	pfam_Golgin_A_7/ERF4	-	no_errors	CHIC1	HGNC	ENSG00000204116	tier1	-	-	46	0	0.00	16	10	38.46
CHM	0	genome.wustl.edu	37	X	85211363	85211363	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	85211363	85211363	A	-	DEL	CHM	ENST00000357749	human	ensembl	74_37	-1	known	frame_shift_del	c.961	p.Y321fs	0.999	pfam_GDP_dissociation_inhibitor,pirsf_Rab_geranylTrfase_A_euk	pfam_GDP_dissociation_inhibitor,pirsf_Rab_geranylTrfase_A_euk,prints_Rab_escort,prints_GDP_dissociation_inhibitor	-	no_errors	CHM	HGNC	ENSG00000188419	tier1			40	0	0.00	25	9	26.47
CHODL	0	genome.wustl.edu	37	21	19638458	19638458	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	19638458	19638458	A	G	SNP	CHODL	ENST00000338326	human	ensembl	74_37	+1	known	silent	c.699	p.Q233	1.000	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CHODL	HGNC	ENSG00000154645	tier1	-	-	45	0	0.00	46	17	26.98
CHPT1	0	genome.wustl.edu	37	12	102108338	102108338	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	102108338	102108338	T	-	DEL	CHPT1	ENST00000229266	human	ensembl	74_37	+1	known	frame_shift_del	c.478	p.F162fs	0.989	pfam_CDP-OH_P_trans,pirsf_CHOPT	pfam_CDP-OH_P_trans,pirsf_CHOPT	-	no_errors	CHPT1	HGNC	ENSG00000111666	tier1			141	0	0.00	99	21	17.50
CHRNA2	0	genome.wustl.edu	37	8	27324753	27324753	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	27324753	27324753	A	G	SNP	CHRNA2	ENST00000407991	human	ensembl	74_37	-1	known	missense	c.442	p.Y148H	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA2	HGNC	ENSG00000120903	tier1	-	-	57	0	0.00	58	8	12.12
CHRNA6	0	genome.wustl.edu	37	8	42611064	42611064	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	42611064	42611064	C	T	SNP	CHRNA6	ENST00000276410	human	ensembl	74_37	-1	known	silent	c.1278	p.S426	0.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNA6	HGNC	ENSG00000147434	tier1	-	-	53	0	0.00	72	7	8.86
CHRNB4	0	genome.wustl.edu	37	15	78917544	78917544	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	78917544	78917544	C	-	DEL	CHRNB4	ENST00000261751	human	ensembl	74_37	-1	known	frame_shift_del	c.1428	p.L477fs	0.868	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB4	HGNC	ENSG00000117971	tier1			54	0	0.00	42	10	19.23
CHRNE	0	genome.wustl.edu	37	17	4804100	4804100	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	4804100	4804100	G	T	SNP	CHRNE	ENST00000293780	human	ensembl	74_37	-1	known	missense	c.905	p.P302Q	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel	-	no_errors	CHRNE	HGNC	ENSG00000108556	tier1	-	-	121	0	0.00	85	10	10.53
CHRNE	0	genome.wustl.edu	37	17	4805288	4805288	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	4805288	4805288	C	T	SNP	CHRNE	ENST00000293780	human	ensembl	74_37	-1	known	missense	c.439	p.V147I	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel	-	no_errors	CHRNE	HGNC	ENSG00000108556	tier1	-	-	89	0	0.00	43	15	25.86
CHST10	0	genome.wustl.edu	37	2	101023110	101023110	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	101023110	101023110	C	A	SNP	CHST10	ENST00000542617	human	ensembl	74_37	-1	known	missense	c.172	p.A58S	1.000	NULL	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	CHST10	HGNC	ENSG00000115526	tier1	-	-	34	0	0.00	15	3	16.67
CHST15	0	genome.wustl.edu	37	10	125804220	125804220	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	125804220	125804220	C	T	SNP	CHST15	ENST00000346248	human	ensembl	74_37	-1	known	silent	c.762	p.P254	0.058	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	CHST15	HGNC	ENSG00000182022	tier1	-	-	29	0	0.00	26	7	21.21
CHST6	0	genome.wustl.edu	37	16	75512843	75512843	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	75512843	75512843	A	T	SNP	CHST6	ENST00000332272	human	ensembl	74_37	-1	known	missense	c.884	p.L295H	0.990	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST6	HGNC	ENSG00000183196	tier1	-	-	57	0	0.00	30	13	30.23
CHST8	0	genome.wustl.edu	37	19	34263896	34263896	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	34263896	34263896	G	A	SNP	CHST8	ENST00000262622	human	ensembl	74_37	+1	known	silent	c.1203	p.Q401	1.000	pfam_Sulfotransferase	pfam_Sulfotransferase	-	no_errors	CHST8	HGNC	ENSG00000124302				25	0	0.00	23	3	11.54
CIC	0	genome.wustl.edu	37	19	42797376	42797376	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	42797376	42797376	C	-	DEL	CIC	ENST00000575354	human	ensembl	74_37	+1	known	frame_shift_del	c.3738	p.P1248fs	0.989	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	CIC	HGNC	ENSG00000079432	tier1			30	0	0.00	24	9	27.27
CIRBP-AS1	0	genome.wustl.edu	37	19	1268346	1268346	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	1268346	1268346	G	A	SNP	CIRBP-AS1	ENST00000585832	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CIRBP-AS1	HGNC	ENSG00000267493	tier1	-	-	114	0	0.00	100	16	13.79
CIT	0	genome.wustl.edu	37	12	120156578	120156578	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	120156578	120156578	T	C	SNP	CIT	ENST00000261833	human	ensembl	74_37	-1	known	missense	c.3803	p.E1268G	1.000	pirsf_Citron_Rho-interacting_kinase	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pirsf_Citron_Rho-interacting_kinase,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CIT	HGNC	ENSG00000122966	tier1	-	-	56	0	0.00	43	4	8.51
CIZ1	0	genome.wustl.edu	37	9	130928677	130928677	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	130928677	130928677	C	A	SNP	CIZ1	ENST00000538431	human	ensembl	74_37	-1	known	missense	c.2574	p.K858N	1.000	NULL	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like,pfscan_Znf_C2H2_matrin	-	no_errors	CIZ1	HGNC	ENSG00000148337	tier1	-	-	159	0	0.00	120	24	16.67
CLCC1	0	genome.wustl.edu	37	1	109482717	109482717	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	109482717	109482717	A	G	SNP	CLCC1	ENST00000356970	human	ensembl	74_37	-1	known	missense	c.844	p.Y282H	1.000	pfam_Chloride_chnl_CLIC-like	pfam_Chloride_chnl_CLIC-like	-	no_errors	CLCC1	HGNC	ENSG00000121940	tier1	-	-	59	0	0.00	52	9	14.75
CLCF1	0	genome.wustl.edu	37	11	67132695	67132695	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	67132695	67132695	C	T	SNP	CLCF1	ENST00000312438	human	ensembl	74_37	-1	known	missense	c.590	p.R197H	1.000	pfam_PRF,pfam_Ciliary_neurotrophic_fac_CNTF,superfamily_4_helix_cytokine-like_core	pfam_PRF,pfam_Ciliary_neurotrophic_fac_CNTF,superfamily_4_helix_cytokine-like_core	-	no_errors	CLCF1	HGNC	ENSG00000175505				49	0	0.00	31	7	18.42
CLCN2	0	genome.wustl.edu	37	3	184075198	184075198	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	184075198	184075198	A	C	SNP	CLCN2	ENST00000265593	human	ensembl	74_37	-1	known	missense	c.850	p.F284V	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated,prints_Cl-channel-2	-	no_errors	CLCN2	HGNC	ENSG00000114859	tier1	-	-	73	0	0.00	49	10	16.67
CLCN6	0	genome.wustl.edu	37	1	11883833	11883833	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	11883833	11883833	G	A	SNP	CLCN6	ENST00000346436	human	ensembl	74_37	+1	known	missense	c.523	p.V175I	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-6	-	no_errors	CLCN6	HGNC	ENSG00000011021	tier1	-	-	98	0	0.00	67	8	10.67
CLDN2	0	genome.wustl.edu	37	X	106171568	106171568	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	106171568	106171568	G	A	SNP	CLDN2	ENST00000336803	human	ensembl	74_37	+1	known	missense	c.110	p.G37D	1.000	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin14	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin2,prints_Claudin,prints_Claudin14	-	no_errors	CLDN2	HGNC	ENSG00000165376				40	0	0.00	27	3	10.00
CLDN6	0	genome.wustl.edu	37	16	3065455	3065456	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	3065455	3065456	0	CC	INS	CLDN6	ENST00000328796	human	ensembl	74_37	-1	known	frame_shift_ins	c.568_567	p.S189fs	0.016:0.007	prints_Claudin6	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin,prints_Claudin6	-	no_errors	CLDN6	HGNC	ENSG00000184697				106	0	0.00	85	9	9.57
CLDN7	0	genome.wustl.edu	37	17	7165359	7165359	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	7165359	7165359	C	A	SNP	CLDN7	ENST00000360325	human	ensembl	74_37	-1	known	missense	c.4	p.A2S	1.000	NULL	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin,prints_Claudin7	-	no_errors	CLDN7	HGNC	ENSG00000181885	tier1	-	-	71	0	0.00	66	12	15.38
CLEC16A	0	genome.wustl.edu	37	16	11272339	11272339	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	11272339	11272339	C	A	SNP	CLEC16A	ENST00000409790	human	ensembl	74_37	+1	known	missense	c.2954	p.P985H	0.992	NULL	pfam_Uncharacterised_FPL	-	no_errors	CLEC16A	HGNC	ENSG00000038532	tier1	-	-	62	0	0.00	43	9	17.31
CLEC18B	0	genome.wustl.edu	37	16	74447571	74447571	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	74447571	74447571	C	T	SNP	CLEC18B	ENST00000339953	human	ensembl	74_37	-1	known	missense	c.460	p.V154M	1.000	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	pfam_CAP_domain,pfam_C-type_lectin,superfamily_CAP_domain,superfamily_C-type_lectin_fold,smart_Allrgn_V5/Tpx1,smart_EG-like_dom,smart_C-type_lectin,pfscan_EG-like_dom,pfscan_C-type_lectin,prints_Allrgn_V5/Tpx1	-	no_errors	CLEC18B	HGNC	ENSG00000140839				129	0	0.00	112	11	8.94
CLEC9A	0	genome.wustl.edu	37	12	10205421	10205424	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	10205421	10205424	TTTT	-	DEL	CLEC9A	ENST00000544751	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000:0.008:0.006	-	-	-	no_errors	CLEC9A	HGNC	ENSG00000197992	tier1			39	0	0.00	26	5	16.13
CLGN	0	genome.wustl.edu	37	4	141317358	141317358	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	141317358	141317358	C	A	SNP	CLGN	ENST00000325617	human	ensembl	74_37	-1	known	missense	c.886	p.D296Y	1.000	pfam_Calret/calnex,superfamily_Calreticulin/calnexin_P_dom	pfam_Calret/calnex,superfamily_ConA-like_lec_gl_sf,superfamily_Calreticulin/calnexin_P_dom,prints_Calret/calnex	-	no_errors	CLGN	HGNC	ENSG00000153132	tier1	-	-	73	0	0.00	69	10	12.66
CLINT1	0	genome.wustl.edu	37	5	157236721	157236721	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	157236721	157236721	G	T	SNP	CLINT1	ENST00000296951	human	ensembl	74_37	-1	known	missense	c.556	p.L186M	1.000	NULL	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	-	no_errors	CLINT1	HGNC	ENSG00000113282	tier1	-	-	54	0	0.00	60	8	11.76
CLIP1	0	genome.wustl.edu	37	12	122848621	122848621	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	122848621	122848621	G	T	SNP	CLIP1	ENST00000540338	human	ensembl	74_37	-1	known	missense	c.691	p.L231I	0.999	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_Znf_CCHC,superfamily_Prefoldin,pfscan_CAP-Gly_domain	-	no_errors	CLIP1	HGNC	ENSG00000130779	tier1	-	-	65	0	0.00	59	4	6.35
CLIP4	0	genome.wustl.edu	37	2	29412372	29412372	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	29412372	29412372	G	A	SNP	CLIP4	ENST00000401617	human	ensembl	74_37	+1	putative	silent	c.1617	p.T539	0.000	NULL	pfam_CAP-Gly_domain,pfam_Ankyrin_rpt,superfamily_CAP-Gly_domain,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_CAP-Gly_domain	-	no_errors	CLIP4	HGNC	ENSG00000115295	tier1	-	-	89	0	0.00	59	11	15.71
CLPSL1	0	genome.wustl.edu	37	6	35754851	35754851	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	35754851	35754851	C	T	SNP	CLPSL1	ENST00000373861	human	ensembl	74_37	+1	known	missense	c.176	p.S59L	0.005	smart_Colipase,prints_Colipase	smart_Colipase,prints_Colipase	-	no_errors	CLPSL1	HGNC	ENSG00000204140	tier1	-	-	129	0	0.00	124	13	9.49
CLSTN3	0	genome.wustl.edu	37	12	7309000	7309000	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	7309000	7309000	G	A	SNP	CLSTN3	ENST00000331148	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CLSTN3	HGNC	ENSG00000139182	tier1	-	-	46	0	0.00	26	6	18.75
CLSTN3	0	genome.wustl.edu	37	12	7310658	7310658	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	7310658	7310658	C	-	DEL	CLSTN3	ENST00000266546	human	ensembl	74_37	+1	known	frame_shift_del	c.2852	p.P953fs	0.088	NULL	pfam_Cadherin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CLSTN3	HGNC	ENSG00000139182	tier1			30	0	0.00	23	9	28.12
CLVS1	0	genome.wustl.edu	37	8	62412295	62412295	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	62412295	62412295	T	-	DEL	CLVS1	ENST00000518858	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	CLVS1	HGNC	ENSG00000177182	tier1			37	0	0.00	37	12	24.49
CMA1	0	genome.wustl.edu	37	14	24975364	24975364	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	24975364	24975364	G	A	SNP	CMA1	ENST00000250378	human	ensembl	74_37	-1	known	missense	c.470	p.P157L	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CMA1	HGNC	ENSG00000092009	tier1	-	-	37	0	0.00	22	8	26.67
CMTM1	0	genome.wustl.edu	37	16	66612868	66612868	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	66612868	66612868	C	T	SNP	CMTM1	ENST00000332695	human	ensembl	74_37	+1	known	silent	c.333	p.P111	0.000	NULL	NULL	-	no_errors	CMTM1	HGNC	ENSG00000089505	tier1	-	-	39	0	0.00	31	8	20.51
CNBD2	0	genome.wustl.edu	37	20	34599098	34599098	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	34599098	34599098	T	C	SNP	CNBD2	ENST00000373973	human	ensembl	74_37	+1	known	silent	c.1188	p.N396	0.000	superfamily_cNMP-bd-like	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNBD2	HGNC	ENSG00000149646				54	0	0.00	47	3	6.00
CNNM1	0	genome.wustl.edu	37	10	101117391	101117391	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	101117391	101117391	C	A	SNP	CNNM1	ENST00000356713	human	ensembl	74_37	+1	known	missense	c.1696	p.L566M	1.000	NULL	pfam_DUF21,pfam_CBS_dom	-	no_errors	CNNM1	HGNC	ENSG00000119946	tier1	-	-	79	0	0.00	65	15	18.75
CNOT1	0	genome.wustl.edu	37	16	58559970	58559970	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	58559970	58559970	A	G	SNP	CNOT1	ENST00000317147	human	ensembl	74_37	-1	known	missense	c.6526	p.F2176L	1.000	pfam_CCR4-Not_Not1_C	pfam_CCR4-Not_Not1_C,superfamily_ARM-type_fold	-	no_errors	CNOT1	HGNC	ENSG00000125107	tier1	-	-	41	0	0.00	39	6	13.33
CNOT1	0	genome.wustl.edu	37	16	58577316	58577317	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	58577316	58577317	AA	-	DEL	CNOT1	ENST00000441024	human	ensembl	74_37	-1	known	frame_shift_del	c.4629_4628	p.F1543fs	0.000:0.000	NULL	superfamily_ARM-type_fold	-	no_errors	CNOT1	HGNC	ENSG00000125107	tier1			56	0	0.00	47	7	12.96
CNPY4	0	genome.wustl.edu	37	7	99720418	99720418	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	99720418	99720418	G	T	SNP	CNPY4	ENST00000262932	human	ensembl	74_37	+1	known	missense	c.354	p.Q118H	1.000	pfam_DUF3456	pfam_DUF3456	-	no_errors	CNPY4	HGNC	ENSG00000166997	tier1	-	-	40	0	0.00	26	11	29.73
CNTD2	0	genome.wustl.edu	37	19	40729296	40729297	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	40729296	40729297	-	G	INS	CNTD2	ENST00000430325	human	ensembl	74_37	-1	known	frame_shift_ins	c.671_670	p.Q224fs	0.849:0.810	superfamily_Cyclin-like,pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CNTD2	HGNC	ENSG00000105219	tier1			24	0	0.00	24	5	17.24
CNTFR	0	genome.wustl.edu	37	9	34557906	34557906	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	34557906	34557906	G	T	SNP	CNTFR	ENST00000351266	human	ensembl	74_37	-1	known	silent	c.396	p.P132	0.984	superfamily_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTFR	HGNC	ENSG00000122756	tier1	-	-	102	0	0.00	57	10	14.93
CNTLN	0	genome.wustl.edu	37	9	17457611	17457611	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	17457611	17457611	A	G	SNP	CNTLN	ENST00000380647	human	ensembl	74_37	+1	known	silent	c.3204	p.A1068	0.998	NULL	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459	tier1	-	-	134	0	0.00	103	33	24.26
CNTLN	0	genome.wustl.edu	37	9	17484318	17484318	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	17484318	17484318	A	G	SNP	CNTLN	ENST00000380647	human	ensembl	74_37	+1	known	missense	c.3881	p.D1294G	0.997	NULL	superfamily_Prefoldin	-	no_errors	CNTLN	HGNC	ENSG00000044459	tier1	-	-	48	0	0.00	51	8	13.56
CNTN3	0	genome.wustl.edu	37	3	74313552	74313552	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	74313552	74313552	T	-	DEL	CNTN3	ENST00000263665	human	ensembl	74_37	-1	known	frame_shift_del	c.3087	p.*1029fs	0.982	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN3	HGNC	ENSG00000113805	tier1			60	0	0.00	54	10	15.62
CNTN5	0	genome.wustl.edu	37	11	99690293	99690293	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	99690293	99690293	C	A	SNP	CNTN5	ENST00000279463	human	ensembl	74_37	+1	known	missense	c.74	p.P25H	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN5	HGNC	ENSG00000149972	tier1	-	-	70	0	0.00	72	7	8.86
CNTNAP1	0	genome.wustl.edu	37	17	40845373	40845373	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	40845373	40845373	C	T	SNP	CNTNAP1	ENST00000264638	human	ensembl	74_37	+1	known	silent	c.2811	p.N937	0.266	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP1	HGNC	ENSG00000108797	tier1	rs143795143	-	25	0	0.00	21	6	22.22
CNTNAP2	0	genome.wustl.edu	37	7	148112873	148112873	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	148112873	148112873	A	-	DEL	CNTNAP2	ENST00000463592	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.048	-	-	-	no_errors	CNTNAP2	HGNC	ENSG00000174469	tier1			73	0	0.00	37	22	37.29
CNTNAP4	0	genome.wustl.edu	37	16	76555129	76555129	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	76555129	76555129	T	-	DEL	CNTNAP4	ENST00000307431	human	ensembl	74_37	+1	known	frame_shift_del	c.2455	p.F820fs	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP4	HGNC	ENSG00000152910	tier1			61	0	0.00	66	14	17.50
CNTNAP5	0	genome.wustl.edu	37	2	125192203	125192203	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	125192203	125192203	G	A	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	silent	c.672	p.Q224	0.999	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052	tier1	-	-	37	0	0.00	21	5	19.23
CNTROB	0	genome.wustl.edu	37	17	7839717	7839717	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	7839717	7839717	C	T	SNP	CNTROB	ENST00000380262	human	ensembl	74_37	+1	known	nonsense	c.628	p.R210*	0.998	NULL	NULL	-	no_errors	CNTROB	HGNC	ENSG00000170037	tier1	-	-	59	0	0.00	36	10	21.74
COG5	0	genome.wustl.edu	37	7	107188598	107188598	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	107188598	107188598	G	T	SNP	COG5	ENST00000297135	human	ensembl	74_37	-1	known	nonsense	c.468	p.Y156*	1.000	pfam_Cog5	pfam_Cog5	-	no_errors	COG5	HGNC	ENSG00000164597	tier1	-	-	74	0	0.00	73	4	5.19
COG6	0	genome.wustl.edu	37	13	40253676	40253677	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	40253676	40253677	-	T	INS	COG6	ENST00000455146	human	ensembl	74_37	+1	known	frame_shift_ins	c.542_543	p.K184fs	0.998:0.592	pfam_COG6	pfam_COG6	-	no_errors	COG6	HGNC	ENSG00000133103	tier1			37	0	0.00	18	12	40.00
COL11A1	0	genome.wustl.edu	37	1	103488445	103488445	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	103488445	103488445	G	A	SNP	COL11A1	ENST00000358392	human	ensembl	74_37	-1	known	silent	c.1134	p.D378	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A1	HGNC	ENSG00000060718	tier1	-	-	47	0	0.00	37	5	11.90
COL12A1	0	genome.wustl.edu	37	6	75798824	75798824	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	75798824	75798824	G	-	DEL	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	frame_shift_del	c.9008	p.P3003fs	1.000	NULL	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1			48	0	0.00	31	11	26.19
COL12A1	0	genome.wustl.edu	37	6	75866088	75866088	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	75866088	75866088	G	-	DEL	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	frame_shift_del	c.3135	p.T1046fs	0.377	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1			62	0	0.00	44	25	36.23
COL15A1	0	genome.wustl.edu	37	9	101706453	101706453	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	101706453	101706453	C	T	SNP	COL15A1	ENST00000375001	human	ensembl	74_37	+1	known	silent	c.21	p.N7	0.618	NULL	pfam_Collagenase_NC10/endostatin,pfam_Collagen,superfamily_C-type_lectin_fold,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL15A1	HGNC	ENSG00000204291	tier1	-	-	69	0	0.00	60	27	31.03
COL18A1	0	genome.wustl.edu	37	21	46930024	46930024	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	46930024	46930024	G	A	SNP	COL18A1	ENST00000359759	human	ensembl	74_37	+1	known	missense	c.4787	p.G1596D	1.000	pfam_Collagenase_NC10/endostatin,superfamily_C-type_lectin_fold	pfam_Collagenase_NC10/endostatin,pfam_DUF959_COL18_N,pfam_Collagen,pfam_Frizzled_dom,superfamily_C-type_lectin_fold,superfamily_ConA-like_lec_gl_sf,superfamily_Frizzled_dom,smart_Frizzled_dom,smart_Laminin_G,pfscan_Frizzled_dom	-	no_errors	COL18A1	HGNC	ENSG00000182871				17	0	0.00	8	3	27.27
COL22A1	0	genome.wustl.edu	37	8	139706798	139706798	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	139706798	139706798	G	A	SNP	COL22A1	ENST00000303045	human	ensembl	74_37	-1	known	nonsense	c.2653	p.Q885*	0.005	pfam_Collagen	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC	ENSG00000169436	tier1	-	-	43	0	0.00	47	6	11.32
COL26A1	0	genome.wustl.edu	37	7	101194404	101194404	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	101194404	101194404	C	T	SNP	COL26A1	ENST00000313669	human	ensembl	74_37	+1	known	nonsense	c.1009	p.R337*	0.429	pfam_Collagen	pfam_EMI_domain,pfam_Collagen,pfscan_EMI_domain	-	no_errors	COL26A1	HGNC	ENSG00000160963	tier1	-	-	145	0	0.00	115	19	14.07
COL2A1	0	genome.wustl.edu	37	12	48378778	48378778	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	48378778	48378778	G	A	SNP	COL2A1	ENST00000380518	human	ensembl	74_37	-1	known	silent	c.1833	p.N611	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL2A1	HGNC	ENSG00000139219	tier1	-	-	51	0	0.00	27	3	10.00
COL4A3	0	genome.wustl.edu	37	2	228128620	228128620	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	228128620	228128620	A	G	SNP	COL4A3	ENST00000396578	human	ensembl	74_37	+1	known	silent	c.1275	p.S425	0.815	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A3	HGNC	ENSG00000169031	tier1	-	-	82	0	0.00	56	11	16.18
COL4A5	0	genome.wustl.edu	37	X	107898611	107898611	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	107898611	107898611	T	C	SNP	COL4A5	ENST00000328300	human	ensembl	74_37	+1	known	silent	c.3297	p.S1099	0.009	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A5	HGNC	ENSG00000188153	tier1	-	-	56	0	0.00	38	5	11.63
COL6A1	0	genome.wustl.edu	37	21	47418819	47418819	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	47418819	47418819	G	T	SNP	COL6A1	ENST00000361866	human	ensembl	74_37	+1	known	missense	c.1620	p.K540N	0.940	pfam_Collagen	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A1	HGNC	ENSG00000142156	tier1	-	-	119	0	0.00	113	26	18.71
COL6A1	0	genome.wustl.edu	37	21	47423639	47423639	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	47423639	47423639	C	T	SNP	COL6A1	ENST00000361866	human	ensembl	74_37	+1	known	silent	c.2799	p.G933	0.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A1	HGNC	ENSG00000142156	tier1	-	-	44	0	0.00	33	17	34.00
COL6A3	0	genome.wustl.edu	37	2	238232746	238232747	+	RNA	DEL	CA	CA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	238232746	238232747	CA	-	DEL	COL6A3	ENST00000473258	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	COL6A3	HGNC	ENSG00000163359	tier1			116	0	0.00	71	9	11.25
COL6A5	0	genome.wustl.edu	37	3	130110080	130110080	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	130110080	130110080	A	-	DEL	COL6A5	ENST00000265379	human	ensembl	74_37	+1	known	frame_shift_del	c.2475	p.K827fs	0.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752	tier1			67	0	0.00	30	7	18.92
COL7A1	0	genome.wustl.edu	37	3	48612871	48612871	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	48612871	48612871	G	-	DEL	COL7A1	ENST00000328333	human	ensembl	74_37	-1	known	frame_shift_del	c.6081	p.P2029fs	0.981	pfam_Collagen	pfam_Collagen,pfam_Fibronectin_type3,pfam_VWF_A,pfam_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,superfamily_Prot_inh_Kunz-m,smart_VWF_A,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL7A1	HGNC	ENSG00000114270	tier1			45	0	0.00	27	3	10.00
COL9A3	0	genome.wustl.edu	37	20	61468612	61468612	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	61468612	61468612	C	A	SNP	COL9A3	ENST00000343916	human	ensembl	74_37	+1	known	missense	c.1781	p.P594H	1.000	pfam_Collagen	pfam_Collagen	-	no_errors	COL9A3	HGNC	ENSG00000092758	tier1	-	-	155	0	0.00	99	42	29.79
COPB1	0	genome.wustl.edu	37	11	14515826	14515826	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	14515826	14515826	A	T	SNP	COPB1	ENST00000249923	human	ensembl	74_37	-1	known	missense	c.251	p.I84N	1.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_COPB1	pfam_Coatomer_bsu_C,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_COPB1	-	no_errors	COPB1	HGNC	ENSG00000129083	tier1	-	-	72	0	0.00	62	7	10.14
COPE	0	genome.wustl.edu	37	19	19016452	19016452	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	19016452	19016452	C	T	SNP	COPE	ENST00000598969	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	COPE	HGNC	ENSG00000105669	tier1	-	-	117	0	0.00	76	36	31.58
COX20	0	genome.wustl.edu	37	1	245005347	245005347	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	245005347	245005347	T	-	DEL	COX20	ENST00000411948	human	ensembl	74_37	+1	known	frame_shift_del	c.144	p.L50fs	0.988	pfam_Cox20/FAM36A,prints_FAM36A	pfam_Cox20/FAM36A,prints_FAM36A	-	no_errors	COX20	HGNC	ENSG00000203667	tier1			128	0	0.00	122	13	9.63
COX7A1	0	genome.wustl.edu	37	19	36642594	36642594	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	36642594	36642594	G	A	SNP	COX7A1	ENST00000292907	human	ensembl	74_37	-1	known	missense	c.79	p.R27C	0.027	pfam_Cyt_c_oxidase_su7a,superfamily_Cyt_c_oxidase_su7a	pfam_Cyt_c_oxidase_su7a,superfamily_Cyt_c_oxidase_su7a	-	no_errors	COX7A1	HGNC	ENSG00000161281	tier1	-	-	79	0	0.00	58	17	22.67
COX7A2L	0	genome.wustl.edu	37	2	42578275	42578276	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	42578275	42578276	AA	-	DEL	COX7A2L	ENST00000482463	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	COX7A2L	HGNC	ENSG00000115944	tier1			36	0	0.00	22	9	29.03
CPAMD8	0	genome.wustl.edu	37	19	17062998	17062998	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	17062998	17062998	A	G	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	silent	c.2430	p.G810	0.846	pfam_Macroglobln_a2	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111	tier1	-	-	41	0	0.00	15	13	46.43
CPEB4	0	genome.wustl.edu	37	5	173383454	173383454	+	RNA	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	173383454	173383454	A	C	SNP	CPEB4	ENST00000519467	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CPEB4	HGNC	ENSG00000113742	tier1	-	-	34	0	0.00	18	8	30.77
CPLX2	0	genome.wustl.edu	37	5	175306035	175306035	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	175306035	175306035	C	T	SNP	CPLX2	ENST00000359546	human	ensembl	74_37	+1	known	silent	c.156	p.H52	0.897	pfam_Synaphin	pfam_Synaphin	-	no_errors	CPLX2	HGNC	ENSG00000145920	tier1	-	-	47	0	0.00	23	11	32.35
CPNE1	0	genome.wustl.edu	37	20	34218840	34218840	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	34218840	34218840	C	A	SNP	CPNE1	ENST00000317677	human	ensembl	74_37	-1	known	silent	c.993	p.V331	0.997	pfam_Copine,smart_VWF_A	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom	-	no_errors	CPNE1	HGNC	ENSG00000214078	tier1	-	-	37	0	0.00	38	4	9.52
CPNE7	0	genome.wustl.edu	37	16	89657608	89657608	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	89657608	89657608	G	A	SNP	CPNE7	ENST00000268720	human	ensembl	74_37	+1	known	silent	c.1467	p.A489	0.521	pfam_Copine,smart_VWF_A,pfscan_VWF_A	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE7	HGNC	ENSG00000178773	tier1	-	-	126	0	0.00	73	12	14.12
CPSF2	0	genome.wustl.edu	37	14	92601793	92601795	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	92601793	92601795	AGA	-	DEL	CPSF2	ENST00000298875	human	ensembl	74_37	+1	known	in_frame_del	c.498_500	p.E169in_frame_del	0.997:1.000:1.000	pfam_Beta-lactamas-like,smart_Beta-lactamas-like	pfam_Beta_Casp,pfam_RMMBL,pfam_Beta-lactamas-like,smart_Beta-lactamas-like	-	no_errors	CPSF2	HGNC	ENSG00000165934	tier1			56	0	0.00	47	7	12.96
CPSF7	0	genome.wustl.edu	37	11	61183898	61183898	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	61183898	61183898	A	G	SNP	CPSF7	ENST00000340437	human	ensembl	74_37	-1	known	missense	c.773	p.V258A	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CPSF7	HGNC	ENSG00000149532	tier1	-	-	51	0	0.00	47	15	24.19
CRADD	0	genome.wustl.edu	37	12	94243848	94243848	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	94243848	94243848	T	C	SNP	CRADD	ENST00000332896	human	ensembl	74_37	+1	known	missense	c.401	p.M134T	0.032	pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain,pfscan_Death_domain	pfam_CARD,pfam_Death_domain,superfamily_DEATH-like_dom,smart_CARD,smart_Death_domain,pfscan_CARD,pfscan_Death_domain	-	no_errors	CRADD	HGNC	ENSG00000169372	tier1	-	-	67	0	0.00	39	20	33.90
CREBBP	0	genome.wustl.edu	37	16	3900661	3900661	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	3900661	3900661	G	-	DEL	CREBBP	ENST00000262367	human	ensembl	74_37	-1	known	frame_shift_del	c.435	p.A146fs	0.961	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339	tier1			85	0	0.00	74	8	9.76
CREBBP	0	genome.wustl.edu	37	16	3843431	3843431	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	3843431	3843431	A	G	SNP	CREBBP	ENST00000262367	human	ensembl	74_37	-1	known	missense	c.1172	p.V391A	1.000	pfam_Znf_TAZ,superfamily_Znf_TAZ,smart_Znf_TAZ,pfscan_Znf_TAZ	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339				51	0	0.00	28	3	9.68
CREBZF	0	genome.wustl.edu	37	11	85371376	85371376	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	85371376	85371376	A	-	DEL	CREBZF	ENST00000531515	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.940	-	-	-	no_errors	CREBZF	HGNC	ENSG00000137504	tier1			40	0	0.00	34	8	19.05
CRIM1	0	genome.wustl.edu	37	2	36774266	36774266	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	36774266	36774266	G	T	SNP	CRIM1	ENST00000280527	human	ensembl	74_37	+1	known	missense	c.2886	p.Q962H	1.000	NULL	pfam_VWF_C,pfam_Antistasin-like,superfamily_Hirudin/antistatin,smart_IGFBP-like,smart_VWC_out,smart_VWF_C,pfscan_VWF_C	-	no_errors	CRIM1	HGNC	ENSG00000150938				40	0	0.00	36	2	5.26
CROCC	0	genome.wustl.edu	37	1	17265554	17265554	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	17265554	17265554	C	T	SNP	CROCC	ENST00000375541	human	ensembl	74_37	+1	known	nonsense	c.1525	p.R509*	1.000	NULL	superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CROCC	HGNC	ENSG00000058453	tier1	-	-	125	0	0.00	101	16	13.68
CROCC	0	genome.wustl.edu	37	1	17267529	17267530	+	RNA	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	17267529	17267530	-	T	INS	CROCC	ENST00000466256	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.057:0.102	-	-	-	no_errors	CROCC	HGNC	ENSG00000058453	tier1			32	0	0.00	25	7	21.88
CROCC	0	genome.wustl.edu	37	1	17287269	17287269	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	17287269	17287269	G	A	SNP	CROCC	ENST00000375541	human	ensembl	74_37	+1	known	missense	c.4049	p.R1350Q	1.000	NULL	superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CROCC	HGNC	ENSG00000058453	tier1	rs140278341	-	49	0	0.00	31	9	22.50
CROCC	0	genome.wustl.edu	37	1	17296892	17296892	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	17296892	17296892	C	T	SNP	CROCC	ENST00000375541	human	ensembl	74_37	+1	known	missense	c.5596	p.R1866C	1.000	NULL	superfamily_Prefoldin,superfamily_t-SNARE	-	no_errors	CROCC	HGNC	ENSG00000058453	tier1	-	-	98	0	0.00	77	15	16.30
CRP	0	genome.wustl.edu	37	1	159683861	159683861	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	159683861	159683861	C	T	SNP	CRP	ENST00000255030	human	ensembl	74_37	-1	known	silent	c.129	p.P43	0.000	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	CRP	HGNC	ENSG00000132693				24	0	0.00	14	2	12.50
CRTAC1	0	genome.wustl.edu	37	10	99655012	99655012	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	99655012	99655012	G	T	SNP	CRTAC1	ENST00000370597	human	ensembl	74_37	-1	known	missense	c.1476	p.H492Q	1.000	pfam_UnbV_ASPIC	pfam_FG-GAP,pfam_UnbV_ASPIC,pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom	-	no_errors	CRTAC1	HGNC	ENSG00000095713	tier1	-	-	39	0	0.00	35	4	10.26
CRTAP	0	genome.wustl.edu	37	3	33161920	33161920	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	33161920	33161920	G	A	SNP	CRTAP	ENST00000320954	human	ensembl	74_37	+1	known	missense	c.556	p.A186T	1.000	NULL	NULL	-	no_errors	CRTAP	HGNC	ENSG00000170275	tier1	-	-	69	0	0.00	62	13	17.33
CRYAA	0	genome.wustl.edu	37	21	44589921	44589922	+	Frame_Shift_Del	DEL	CC	CC	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	44589921	44589922	CC	-	DEL	CRYAA	ENST00000398133	human	ensembl	74_37	+1	putative	frame_shift_del	c.87_88	p.H33fs	0.026:0.029	superfamily_HSP20-like_chaperone	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	-	no_errors	CRYAA	HGNC	ENSG00000160202	tier1			69	0	0.00	51	28	35.44
CSF2RA	0	genome.wustl.edu	37	X	1424391	1424391	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	1424391	1424391	C	T	SNP	CSF2RA	ENST00000417535	human	ensembl	74_37	+1	known	silent	c.1198	p.L400	0.003	NULL	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	-	no_errors	CSF2RA	HGNC	ENSG00000198223	tier1	-	-	175	0	0.00	88	18	16.98
CSMD1	0	genome.wustl.edu	37	8	3019724	3019724	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	3019724	3019724	T	C	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.5804	p.N1935S	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	61	0	0.00	77	5	6.10
CSMD3	0	genome.wustl.edu	37	8	113241029	113241029	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	113241029	113241029	A	-	DEL	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	frame_shift_del	c.10920	p.F3640fs	1.000	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1			51	0	0.00	37	8	17.78
CSNK1A1	0	genome.wustl.edu	37	5	148875308	148875311	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	148875308	148875311	AAAA	-	DEL	CSNK1A1	ENST00000412431	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.004:0.004:0.004	-	-	-	no_errors	CTB-89H12.4	Clone_based_vega_gene	ENSG00000230551	tier1			49	0	0.00	45	9	16.67
CSNK1A1	0	genome.wustl.edu	37	5	148875718	148875718	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	148875718	148875718	T	C	SNP	CSNK1A1	ENST00000412431	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	CTB-89H12.4	Clone_based_vega_gene	ENSG00000230551	tier1	-	-	57	0	0.00	34	5	12.82
CSRNP3	0	genome.wustl.edu	37	2	166351278	166351278	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	166351278	166351278	A	G	SNP	CSRNP3	ENST00000464503	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CSRNP3	HGNC	ENSG00000178662	tier1	-	-	46	0	0.00	36	10	21.74
CTBP1-AS2	0	genome.wustl.edu	37	4	1245880	1245880	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	1245880	1245880	A	-	DEL	CTBP1-AS2	ENST00000581398	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTBP1-AS2	HGNC	ENSG00000196810	tier1			33	0	0.00	33	9	21.43
CTC1	0	genome.wustl.edu	37	17	8135521	8135521	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	8135521	8135521	A	G	SNP	CTC1	ENST00000315684	human	ensembl	74_37	-1	known	silent	c.2085	p.A695	0.010	NULL	NULL	-	no_errors	CTC1	HGNC	ENSG00000178971	tier1	-	-	56	0	0.00	22	13	37.14
CTCFL	0	genome.wustl.edu	37	20	56090790	56090790	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	56090790	56090790	C	T	SNP	CTCFL	ENST00000423479	human	ensembl	74_37	-1	known	missense	c.1160	p.R387H	0.997	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CTCFL	HGNC	ENSG00000124092	tier1	-	-	49	0	0.00	41	16	28.07
CTNNA1	0	genome.wustl.edu	37	5	138266343	138266343	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	138266343	138266343	G	A	SNP	CTNNA1	ENST00000302763	human	ensembl	74_37	+1	known	missense	c.2192	p.R731Q	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA1	HGNC	ENSG00000044115	tier1	-	-	24	0	0.00	7	5	41.67
CTNNA2	0	genome.wustl.edu	37	2	79914694	79914694	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	79914694	79914694	T	-	DEL	CTNNA2	ENST00000409266	human	ensembl	74_37	+1	putative	frame_shift_del	c.107	p.S39fs	0.005	NULL	superfamily_Vinculin/catenin	-	no_errors	CTNNA2	HGNC	ENSG00000066032	tier1			76	0	0.00	58	15	20.55
CTNNB1	0	genome.wustl.edu	37	3	41275790	41275790	+	Splice_Site	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	41275790	41275790	T	C	SNP	CTNNB1	ENST00000349496	human	ensembl	74_37	+1	known	splice_site	c.1683+2	e9+2	1.000	-	-	-	no_errors	CTNNB1	HGNC	ENSG00000168036				32	0	0.00	32	8	20.00
CTNNBL1	0	genome.wustl.edu	37	20	36361416	36361416	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	36361416	36361416	A	-	DEL	CTNNBL1	ENST00000405275	human	ensembl	74_37	+1	known	frame_shift_del	c.85	p.R31fs	1.000	pfam_CTNNBL1_N	pfam_CTNNBL1_N,superfamily_ARM-type_fold	-	no_errors	CTNNBL1	HGNC	ENSG00000132792	tier1			40	0	0.00	42	7	14.29
CTRC	0	genome.wustl.edu	37	1	15766805	15766805	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	15766805	15766805	G	A	SNP	CTRC	ENST00000375949	human	ensembl	74_37	+1	known	missense	c.50	p.C17Y	1.000	superfamily_Trypsin-like_Pept_dom	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CTRC	HGNC	ENSG00000162438	tier1	-	-	67	0	0.00	49	25	33.78
CTRL	0	genome.wustl.edu	37	16	67965003	67965003	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	67965003	67965003	G	A	SNP	CTRL	ENST00000574481	human	ensembl	74_37	-1	known	nonsense	c.154	p.Q52*	1.000	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CTRL	HGNC	ENSG00000141086	tier1	-	-	52	0	0.00	48	16	25.00
CUBN	0	genome.wustl.edu	37	10	16878296	16878296	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	16878296	16878296	A	G	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.10118	p.V3373A	0.011	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611	tier1	-	-	62	0	0.00	32	8	19.51
CUL1	0	genome.wustl.edu	37	7	148480914	148480914	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	148480914	148480914	A	-	DEL	CUL1	ENST00000325222	human	ensembl	74_37	+1	known	frame_shift_del	c.1123	p.K376fs	1.000	pfam_Cullin_N,superfamily_Cullin_repeat-like_dom	pfam_Cullin_N,pfam_Cullin_neddylation_domain,superfamily_Cullin_repeat-like_dom,superfamily_Cullin_homology,smart_Cullin_homology,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL1	HGNC	ENSG00000055130	tier1			63	0	0.00	60	13	17.81
CUL4B	0	genome.wustl.edu	37	X	119672333	119672333	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	119672333	119672333	A	-	DEL	CUL4B	ENST00000497616	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CUL4B	HGNC	ENSG00000158290	tier1			19	0	0.00	15	5	25.00
CWH43	0	genome.wustl.edu	37	4	49063827	49063827	+	Splice_Site	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	49063827	49063827	A	T	SNP	CWH43	ENST00000226432	human	ensembl	74_37	+1	known	splice_site	c.2022-2	e16-2	0.993	-	-	-	no_errors	CWH43	HGNC	ENSG00000109182	tier1	-	-	103	0	0.00	55	34	37.78
CWH43	0	genome.wustl.edu	37	4	48994006	48994006	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	48994006	48994006	G	A	SNP	CWH43	ENST00000226432	human	ensembl	74_37	+1	known	missense	c.410	p.R137H	0.987	NULL	superfamily_Endo/exonuclease/phosphatase	-	no_errors	CWH43	HGNC	ENSG00000109182				43	0	0.00	33	2	5.71
CXADRP3	0	genome.wustl.edu	37	18	14478405	14478405	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	14478405	14478405	C	T	SNP	CXADRP3	ENST00000581457	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	CXADRP3	HGNC	ENSG00000265766	tier1	-	-	36	0	0.00	21	8	27.59
CXADRP3	0	genome.wustl.edu	37	18	14478662	14478662	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	14478662	14478662	T	-	DEL	CXADRP3	ENST00000581457	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.487	-	-	-	no_errors	CXADRP3	HGNC	ENSG00000265766	tier1			44	0	0.00	32	14	30.43
CXXC5	0	genome.wustl.edu	37	5	139060907	139060907	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	139060907	139060907	G	A	SNP	CXXC5	ENST00000302517	human	ensembl	74_37	+1	known	missense	c.799	p.A267T	1.000	pfam_Znf_CXXC,pfscan_Znf_CXXC	pfam_Znf_CXXC,pfscan_Znf_CXXC	-	no_errors	CXXC5	HGNC	ENSG00000171604	tier1	-	-	52	0	0.00	36	7	16.28
CXXC5	0	genome.wustl.edu	37	5	139062642	139062642	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	139062642	139062642	T	-	DEL	CXXC5	ENST00000505812	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CXXC5	HGNC	ENSG00000171604	tier1			66	0	0.00	39	12	23.53
CXorf64	0	genome.wustl.edu	37	X	125954833	125954833	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	125954833	125954833	A	G	SNP	CXorf64	ENST00000371125	human	ensembl	74_37	+1	known	missense	c.212	p.E71G	0.000	NULL	NULL	-	no_errors	CXorf64	HGNC	ENSG00000183631				52	0	0.00	32	4	11.11
CYBA	0	genome.wustl.edu	37	16	88709879	88709879	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	88709879	88709879	G	A	SNP	CYBA	ENST00000261623	human	ensembl	74_37	-1	known	missense	c.470	p.P157L	0.937	pfam_Cyt_b558_asu,pirsf_Cyt_b558_asu	pfam_Cyt_b558_asu,pirsf_Cyt_b558_asu	-	no_errors	CYBA	HGNC	ENSG00000051523	tier1	-	-	18	0	0.00	10	5	33.33
CYLD	0	genome.wustl.edu	37	16	50826572	50826572	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	50826572	50826572	T	-	DEL	CYLD	ENST00000311559	human	ensembl	74_37	+1	known	frame_shift_del	c.2306	p.P771fs	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_CAP-Gly_domain,pfam_Peptidase_C19/C67,superfamily_CAP-Gly_domain,pfscan_CAP-Gly_domain,pfscan_Peptidase_C19/C67	-	no_errors	CYLD	HGNC	ENSG00000083799	tier1			46	0	0.00	24	5	17.24
CYP11B2	0	genome.wustl.edu	37	8	143994125	143994125	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	143994125	143994125	G	T	SNP	CYP11B2	ENST00000323110	human	ensembl	74_37	-1	known	missense	c.1219	p.L407I	0.881	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP11B2	HGNC	ENSG00000179142	tier1	-	-	105	0	0.00	111	11	9.02
CYP17A1	0	genome.wustl.edu	37	10	104590640	104590640	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	104590640	104590640	C	T	SNP	CYP17A1	ENST00000369887	human	ensembl	74_37	-1	known	missense	c.1346	p.R449H	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP17A1	HGNC	ENSG00000148795	tier1	-	-	54	0	0.00	35	10	22.22
CYP2D6	0	genome.wustl.edu	37	22	42524306	42524306	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	42524306	42524306	C	T	SNP	CYP2D6	ENST00000360608	human	ensembl	74_37	-1	known	missense	c.713	p.G238D	0.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2D-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2D6	HGNC	ENSG00000100197				53	0	0.00	38	2	5.00
CYP2E1	0	genome.wustl.edu	37	10	135352525	135352525	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	135352525	135352525	G	T	SNP	CYP2E1	ENST00000469258	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CYP2E1	HGNC	ENSG00000130649	tier1	-	-	52	0	0.00	24	14	36.84
CYP2F1	0	genome.wustl.edu	37	19	41633836	41633836	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	41633836	41633836	C	T	SNP	CYP2F1	ENST00000331105	human	ensembl	74_37	+1	known	missense	c.1325	p.A442V	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_CYP2_fam,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2F1	HGNC	ENSG00000197446	tier1	-	-	80	0	0.00	55	10	15.38
CYP3A43	0	genome.wustl.edu	37	7	99457552	99457552	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	99457552	99457552	C	T	SNP	CYP3A43	ENST00000222382	human	ensembl	74_37	+1	known	missense	c.965	p.A322V	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_CYP3A,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-II,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	-	no_errors	CYP3A43	HGNC	ENSG00000021461	tier1	-	-	106	0	0.00	61	24	28.24
CYP4F35P	0	genome.wustl.edu	37	18	14339551	14339551	+	RNA	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	14339551	14339551	C	A	SNP	CYP4F35P	ENST00000582957	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.052	-	-	-	no_errors	CYP4F35P	HGNC	ENSG00000265787	tier1	-	-	35	0	0.00	24	11	31.43
CYS1	0	genome.wustl.edu	37	2	10199034	10199034	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	10199034	10199034	G	A	SNP	CYS1	ENST00000381813	human	ensembl	74_37	-1	known	silent	c.423	p.Y141	0.030	NULL	NULL	-	no_errors	CYS1	HGNC	ENSG00000205795	tier1	-	-	90	0	0.00	69	12	14.63
DAB1	0	genome.wustl.edu	37	1	57538024	57538024	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	57538024	57538024	G	A	SNP	DAB1	ENST00000371231	human	ensembl	74_37	-1	known	missense	c.370	p.R124W	1.000	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	DAB1	HGNC	ENSG00000173406	tier1	-	-	61	0	0.00	54	15	21.74
DAGLA	0	genome.wustl.edu	37	11	61493483	61493483	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	61493483	61493483	G	A	SNP	DAGLA	ENST00000257215	human	ensembl	74_37	+1	known	missense	c.565	p.G189S	1.000	NULL	pfam_Lipase_3	-	no_errors	DAGLA	HGNC	ENSG00000134780				30	0	0.00	25	4	13.79
DAK	0	genome.wustl.edu	37	11	61109365	61109365	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	61109365	61109365	C	T	SNP	DAK	ENST00000394900	human	ensembl	74_37	+1	known	silent	c.636	p.D212	0.200	pfam_Dak1,tigrfam_DhaK_ATP	pfam_Dak1,pfam_DhaL_dom,superfamily_DhaL_dom,tigrfam_DhaK_ATP	-	no_errors	DAK	HGNC	ENSG00000149476	tier1	-	-	38	0	0.00	41	11	21.15
DAPK1	0	genome.wustl.edu	37	9	90321327	90321327	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	90321327	90321327	G	A	SNP	DAPK1	ENST00000469640	human	ensembl	74_37	+1	known	missense	c.3416	p.R1139H	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730	tier1	-	-	34	0	0.00	34	8	19.05
DAZAP2	0	genome.wustl.edu	37	12	51634238	51634238	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	51634238	51634238	A	G	SNP	DAZAP2	ENST00000549555	human	ensembl	74_37	+1	known	missense	c.125	p.Y42C	1.000	pfam_DAZ_assoc-2	pfam_DAZ_assoc-2	-	no_errors	DAZAP2	HGNC	ENSG00000183283	tier1	-	-	58	0	0.00	54	11	16.67
DCAF13	0	genome.wustl.edu	37	8	104427646	104427646	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	104427646	104427646	C	A	SNP	DCAF13	ENST00000297579	human	ensembl	74_37	+1	known	nonsense	c.428	p.S143*	0.002	NULL	pfam_Sof1,pfam_WD40_repeat,pfam_TIF_beta_prop-like,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF13	HGNC	ENSG00000164934	tier1	-	-	27	0	0.00	20	8	28.57
DCAF15	0	genome.wustl.edu	37	19	14070191	14070191	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	14070191	14070191	C	-	DEL	DCAF15	ENST00000254337	human	ensembl	74_37	+1	known	frame_shift_del	c.1119	p.P375fs	0.970	NULL	NULL	-	no_errors	DCAF15	HGNC	ENSG00000132017	tier1			50	0	0.00	41	5	10.87
DCAF6	0	genome.wustl.edu	37	1	168034884	168034884	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	168034884	168034884	C	T	SNP	DCAF6	ENST00000367840	human	ensembl	74_37	+1	known	silent	c.2496	p.G832	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_IQ_motif_EF-hand-BS,pfscan_WD40_repeat_dom	-	no_errors	DCAF6	HGNC	ENSG00000143164	tier1	-	-	60	0	0.00	39	18	31.58
DCAF8	0	genome.wustl.edu	37	1	160209942	160209942	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	160209942	160209942	T	C	SNP	DCAF8	ENST00000608310	human	ensembl	74_37	-1	known	missense	c.730	p.N244D	1.000	NULL	pfam_Pex19,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF8	HGNC	ENSG00000132716	tier1	-	-	40	0	0.00	28	5	15.15
DCHS1	0	genome.wustl.edu	37	11	6645455	6645456	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	6645455	6645456	-	A	INS	DCHS1	ENST00000299441	human	ensembl	74_37	-1	known	frame_shift_ins	c.7452_7451	p.L2484fs	1.000:0.995	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS1	HGNC	ENSG00000166341	tier1			42	0	0.00	32	7	17.95
DCHS1	0	genome.wustl.edu	37	11	6662142	6662142	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	6662142	6662142	G	-	DEL	DCHS1	ENST00000299441	human	ensembl	74_37	-1	known	frame_shift_del	c.703	p.R235fs	0.606	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS1	HGNC	ENSG00000166341	tier1			37	0	0.00	35	9	20.45
DCHS2	0	genome.wustl.edu	37	4	155160425	155160425	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	155160425	155160425	C	-	DEL	DCHS2	ENST00000357232	human	ensembl	74_37	-1	known	frame_shift_del	c.6024	p.Y2009fs	0.093	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410	tier1			47	0	0.00	34	9	20.93
DCHS2	0	genome.wustl.edu	37	4	155412142	155412142	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	155412142	155412142	G	A	SNP	DCHS2	ENST00000339452	human	ensembl	74_37	-1	known	silent	c.366	p.T122	0.903	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410	tier1	-	-	34	0	0.00	20	4	16.67
DCLK1	0	genome.wustl.edu	37	13	36445420	36445421	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	36445420	36445421	-	T	INS	DCLK1	ENST00000360631	human	ensembl	74_37	-1	known	frame_shift_ins	c.881_880	p.S294fs	1.000:1.000	NULL	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK1	HGNC	ENSG00000133083	tier1			46	0	0.00	33	6	15.38
DCLK1	0	genome.wustl.edu	37	13	36699950	36699950	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	36699950	36699950	A	G	SNP	DCLK1	ENST00000360631	human	ensembl	74_37	-1	known	missense	c.325	p.Y109H	1.000	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK1	HGNC	ENSG00000133083	tier1	-	-	67	0	0.00	27	14	34.15
DCLK2	0	genome.wustl.edu	37	4	151023683	151023683	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	151023683	151023683	A	-	DEL	DCLK2	ENST00000302176	human	ensembl	74_37	+1	known	frame_shift_del	c.475	p.N160fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Doublecortin_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Doublecortin_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Doublecortin_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK2	HGNC	ENSG00000170390	tier1			62	0	0.00	36	9	20.00
DCLRE1A	0	genome.wustl.edu	37	10	115609832	115609832	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	115609832	115609832	A	-	DEL	DCLRE1A	ENST00000361384	human	ensembl	74_37	-1	known	frame_shift_del	c.1032	p.F344fs	0.000	NULL	pfam_DRMBL	-	no_errors	DCLRE1A	HGNC	ENSG00000198924	tier1			42	0	0.00	42	15	26.32
DCP1B	0	genome.wustl.edu	37	12	2061979	2061979	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	2061979	2061979	G	T	SNP	DCP1B	ENST00000280665	human	ensembl	74_37	-1	known	missense	c.1127	p.P376H	0.011	NULL	pfam_DCP1	-	no_errors	DCP1B	HGNC	ENSG00000151065	tier1	-	-	52	0	0.00	37	8	17.78
DDAH1	0	genome.wustl.edu	37	1	85787101	85787101	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	85787101	85787101	C	T	SNP	DDAH1	ENST00000483110	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.651	-	-	-	no_errors	DDAH1	HGNC	ENSG00000153904	tier1	-	-	87	0	0.00	59	5	7.81
DDB1	0	genome.wustl.edu	37	11	61071386	61071386	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	61071386	61071386	C	T	SNP	DDB1	ENST00000301764	human	ensembl	74_37	-1	known	missense	c.2783	p.R928H	1.000	pfam_Cleavage/polyA-sp_fac_asu_C	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	DDB1	HGNC	ENSG00000167986	tier1	-	-	66	0	0.00	64	11	14.67
DDHD1	0	genome.wustl.edu	37	14	53527857	53527857	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	53527857	53527857	G	A	SNP	DDHD1	ENST00000323669	human	ensembl	74_37	-1	known	missense	c.1829	p.A610V	1.000	NULL	pfam_DDHD,pfscan_DDHD	-	no_errors	DDHD1	HGNC	ENSG00000100523	tier1	-	-	42	0	0.00	57	8	12.31
DDHD2	0	genome.wustl.edu	37	8	38103301	38103301	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	38103301	38103301	G	T	SNP	DDHD2	ENST00000397166	human	ensembl	74_37	+1	known	missense	c.890	p.R297M	0.825	NULL	pfam_DDHD,pfam_WWE-dom,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_DDHD,pfscan_WWE-dom	-	no_errors	DDHD2	HGNC	ENSG00000085788	tier1	-	-	63	0	0.00	63	10	13.70
DDN	0	genome.wustl.edu	37	12	49391444	49391444	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	49391444	49391444	C	A	SNP	DDN	ENST00000421952	human	ensembl	74_37	-1	known	missense	c.1215	p.W405C	1.000	NULL	NULL	-	no_errors	DDN	HGNC	ENSG00000181418	tier1	-	-	265	0	0.00	183	32	14.88
DDN	0	genome.wustl.edu	37	12	49391699	49391699	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	49391699	49391699	C	A	SNP	DDN	ENST00000421952	human	ensembl	74_37	-1	known	silent	c.960	p.L320	0.004	NULL	NULL	-	no_errors	DDN	HGNC	ENSG00000181418	tier1	-	-	69	0	0.00	50	9	15.25
DDX26B	0	genome.wustl.edu	37	X	134680317	134680317	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	134680317	134680317	T	-	DEL	DDX26B	ENST00000370752	human	ensembl	74_37	+1	known	frame_shift_del	c.352	p.L120fs	1.000	pfscan_VWF_A	pfscan_VWF_A	-	no_errors	DDX26B	HGNC	ENSG00000165359	tier1			153	0	0.00	114	19	14.29
DDX27	0	genome.wustl.edu	37	20	47858504	47858504	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	47858504	47858504	A	-	DEL	DDX27	ENST00000371764	human	ensembl	74_37	+1	known	frame_shift_del	c.2065	p.K691fs	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX27	HGNC	ENSG00000124228	tier1			70	0	0.00	36	17	32.08
DDX3X	0	genome.wustl.edu	37	X	41202035	41202035	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	41202035	41202035	C	T	SNP	DDX3X	ENST00000399959	human	ensembl	74_37	+1	known	silent	c.489	p.Y163	0.993	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX3X	HGNC	ENSG00000215301	tier1	-	-	74	0	0.00	38	14	26.92
DDX43	0	genome.wustl.edu	37	6	74111695	74111696	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	74111695	74111696	-	A	INS	DDX43	ENST00000370336	human	ensembl	74_37	+1	known	frame_shift_ins	c.550_551	p.T186fs	0.036:0.001	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_KH_dom_type_1,superfamily_P-loop_NTPase,smart_KH_dom,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_KH_dom_type_1,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX43	HGNC	ENSG00000080007	tier1			47	0	0.00	35	18	33.96
DDX60	0	genome.wustl.edu	37	4	169167687	169167687	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	169167687	169167687	T	C	SNP	DDX60	ENST00000393743	human	ensembl	74_37	-1	known	missense	c.4046	p.K1349R	0.275	pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX60	HGNC	ENSG00000137628	tier1	-	-	58	0	0.00	43	7	14.00
DEDD	0	genome.wustl.edu	37	1	161091639	161091639	+	RNA	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	161091639	161091639	A	T	SNP	DEDD	ENST00000489249	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.173	-	-	-	no_errors	DEDD	HGNC	ENSG00000158796	tier1	-	-	51	0	0.00	22	4	14.81
DEF6	0	genome.wustl.edu	37	6	35287364	35287364	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	35287364	35287364	C	T	SNP	DEF6	ENST00000316637	human	ensembl	74_37	+1	known	missense	c.1279	p.R427C	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DEF6	HGNC	ENSG00000023892	tier1	-	-	75	0	0.00	58	12	17.14
DEFB112	0	genome.wustl.edu	37	6	50016318	50016318	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	50016318	50016318	T	C	SNP	DEFB112	ENST00000322246	human	ensembl	74_37	-1	known	missense	c.47	p.Y16C	0.000	NULL	NULL	-	no_errors	DEFB112	HGNC	ENSG00000180872	tier1	-	-	86	0	0.00	80	9	10.11
DENND1C	0	genome.wustl.edu	37	19	6477251	6477251	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	6477251	6477251	G	-	DEL	DENND1C	ENST00000381480	human	ensembl	74_37	-1	known	frame_shift_del	c.491	p.P164fs	0.983	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND1C	HGNC	ENSG00000205744	tier1			96	0	0.00	82	16	16.33
DENND4A	0	genome.wustl.edu	37	15	66044893	66044893	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	66044893	66044893	C	T	SNP	DENND4A	ENST00000443035	human	ensembl	74_37	-1	known	missense	c.385	p.A129T	1.000	pfscan_uDENN_dom	pfam_DENN_dom,pfam_dDENN_dom,pfam_uDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,tigrfam_Pentatricopeptide_repeat	-	no_errors	DENND4A	HGNC	ENSG00000174485	tier1	-	-	63	0	0.00	62	4	5.97
DEPDC1	0	genome.wustl.edu	37	1	68947781	68947781	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	68947781	68947781	T	G	SNP	DEPDC1	ENST00000456315	human	ensembl	74_37	-1	known	missense	c.1710	p.E570D	1.000	superfamily_Rho_GTPase_activation_prot	pfam_DEP_dom,superfamily_Rho_GTPase_activation_prot,smart_DEP_dom,pfscan_DEP_dom	-	no_errors	DEPDC1	HGNC	ENSG00000024526	tier1	-	-	89	0	0.00	61	14	18.67
DEPDC5	0	genome.wustl.edu	37	22	32270369	32270369	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	32270369	32270369	C	T	SNP	DEPDC5	ENST00000266091	human	ensembl	74_37	+1	known	missense	c.3608	p.A1203V	0.751	pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	pfam_IML1,pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	-	no_errors	DEPDC5	HGNC	ENSG00000100150				24	0	0.00	34	3	8.11
DGCR8	0	genome.wustl.edu	37	22	20074724	20074724	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	20074724	20074724	G	T	SNP	DGCR8	ENST00000351989	human	ensembl	74_37	+1	known	missense	c.760	p.G254C	1.000	NULL	pfam_dsRNA-bd_dom,superfamily_WW_dom,smart_WW_dom,smart_dsRNA-bd_dom,pfscan_WW_dom,pfscan_dsRNA-bd_dom	-	no_errors	DGCR8	HGNC	ENSG00000128191	tier1	-	-	35	0	0.00	30	5	13.89
DGKG	0	genome.wustl.edu	37	3	185970893	185970893	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	185970893	185970893	C	T	SNP	DGKG	ENST00000265022	human	ensembl	74_37	-1	known	missense	c.1589	p.R530H	1.000	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKG	HGNC	ENSG00000058866	tier1	-	-	54	0	0.00	40	10	20.00
DGKH	0	genome.wustl.edu	37	13	42742607	42742607	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	42742607	42742607	C	T	SNP	DGKH	ENST00000337343	human	ensembl	74_37	+1	known	missense	c.1150	p.R384W	1.000	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_SAM_2,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_SAM_type1,superfamily_SAM/pointed,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_SAM,pfscan_Pleckstrin_homology,pfscan_SAM,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKH	HGNC	ENSG00000102780				55	0	0.00	64	4	5.88
DHFRL1	0	genome.wustl.edu	37	3	93780332	93780332	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	93780332	93780332	G	A	SNP	DHFRL1	ENST00000314636	human	ensembl	74_37	-1	known	silent	c.24	p.I8	1.000	pfam_DHFR_dom,superfamily_DHFR-like_dom	pfam_DHFR_dom,superfamily_DHFR-like_dom,prints_DHFR	-	no_errors	DHFRL1	HGNC	ENSG00000178700	tier1	-	-	89	0	0.00	56	11	16.42
DHODH	0	genome.wustl.edu	37	16	72057170	72057170	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	72057170	72057170	G	A	SNP	DHODH	ENST00000219240	human	ensembl	74_37	+1	known	missense	c.926	p.R309Q	1.000	pfam_Dihydroorotate_DH_1_2,pirsf_Dihydroorotate_DH_1_2,tigrfam_Dihydroorotate_DH_2	pfam_Dihydroorotate_DH_1_2,pirsf_Dihydroorotate_DH_1_2,tigrfam_Dihydroorotate_DH_2	-	no_errors	DHODH	HGNC	ENSG00000102967	tier1	-	-	42	0	0.00	41	4	8.89
DHODH	0	genome.wustl.edu	37	16	72057492	72057492	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	72057492	72057492	G	A	SNP	DHODH	ENST00000219240	human	ensembl	74_37	+1	known	missense	c.1093	p.V365I	0.966	pfam_Dihydroorotate_DH_1_2,pirsf_Dihydroorotate_DH_1_2,tigrfam_Dihydroorotate_DH_2	pfam_Dihydroorotate_DH_1_2,pirsf_Dihydroorotate_DH_1_2,tigrfam_Dihydroorotate_DH_2	-	no_errors	DHODH	HGNC	ENSG00000102967	tier1	-	-	49	0	0.00	41	18	30.51
DHRS1	0	genome.wustl.edu	37	14	24766024	24766024	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	24766024	24766024	G	A	SNP	DHRS1	ENST00000288111	human	ensembl	74_37	-1	known	nonsense	c.214	p.R72*	0.007	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DHB_DH	-	no_errors	DHRS1	HGNC	ENSG00000157379	tier1	-	-	48	0	0.00	22	9	29.03
DHRS12	0	genome.wustl.edu	37	13	52348164	52348164	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	52348164	52348164	C	T	SNP	DHRS12	ENST00000444610	human	ensembl	74_37	-1	known	missense	c.517	p.V173I	0.996	pfam_DH_sc/Rdtase_SDR,pfam_Epimerase_deHydtase,pfam_PKS_KR	pfam_DH_sc/Rdtase_SDR,pfam_Epimerase_deHydtase,pfam_PKS_KR,prints_Glc/ribitol_DH	-	no_errors	DHRS12	HGNC	ENSG00000102796	tier1	rs145669707	-	28	0	0.00	20	6	23.08
DHRS13	0	genome.wustl.edu	37	17	27228278	27228278	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	27228278	27228278	G	A	SNP	DHRS13	ENST00000378895	human	ensembl	74_37	-1	known	silent	c.412	p.L138	1.000	pfam_DH_sc/Rdtase_SDR,pfam_Epimerase_deHydtase	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_Epimerase_deHydtase,prints_Glc/ribitol_DH	-	no_errors	DHRS13	HGNC	ENSG00000167536	tier1	-	-	30	0	0.00	30	4	11.76
DHX35	0	genome.wustl.edu	37	20	37647465	37647465	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	37647465	37647465	G	A	SNP	DHX35	ENST00000252011	human	ensembl	74_37	+1	known	missense	c.1421	p.R474H	0.895	pfam_Helicase-assoc_dom,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX35	HGNC	ENSG00000101452	tier1	-	-	55	0	0.00	28	11	28.21
DHX38	0	genome.wustl.edu	37	16	72133686	72133686	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	72133686	72133686	C	T	SNP	DHX38	ENST00000268482	human	ensembl	74_37	+1	known	missense	c.1016	p.P339L	1.000	NULL	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX38	HGNC	ENSG00000140829	tier1	-	-	46	0	0.00	39	5	11.36
DHX40	0	genome.wustl.edu	37	17	57663593	57663593	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	57663593	57663593	A	G	SNP	DHX40	ENST00000251241	human	ensembl	74_37	+1	known	missense	c.1423	p.R475G	1.000	pfam_Helicase-assoc_dom,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_T2SS_protein-E,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX40	HGNC	ENSG00000108406	tier1	-	-	36	0	0.00	18	14	43.75
DHX57	0	genome.wustl.edu	37	2	39089427	39089427	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	39089427	39089427	G	A	SNP	DHX57	ENST00000295373	human	ensembl	74_37	-1	known	silent	c.432	p.N144	0.943	NULL	pfam_RWD-domain,pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Znf_CCCH,superfamily_P-loop_NTPase,superfamily_UBA-like,superfamily_UBQ-conjugating_enzyme/RWD,smart_Znf_CCCH,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX57	HGNC	ENSG00000163214	tier1	-	-	45	0	0.00	35	8	18.60
DHX9	0	genome.wustl.edu	37	1	182852698	182852698	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	182852698	182852698	C	-	DEL	DHX9	ENST00000367549	human	ensembl	74_37	+1	known	frame_shift_del	c.3188	p.L1065fs	0.984	pfam_DUF1605	pfam_dsRNA-bd_dom,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_dsRNA-bd_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_dsRNA-bd_dom	-	no_errors	DHX9	HGNC	ENSG00000135829	tier1			45	0	0.00	34	11	24.44
DIAPH2	0	genome.wustl.edu	37	X	96173528	96173528	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	96173528	96173528	C	A	SNP	DIAPH2	ENST00000324765	human	ensembl	74_37	+1	known	missense	c.890	p.A297D	1.000	pfam_FH3_dom,superfamily_ARM-type_fold	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DIAPH2	HGNC	ENSG00000147202	tier1	-	-	76	0	0.00	57	12	17.39
DIAPH3	0	genome.wustl.edu	37	13	60565348	60565348	+	Silent	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	60565348	60565348	T	A	SNP	DIAPH3	ENST00000400324	human	ensembl	74_37	-1	known	silent	c.1305	p.G435	0.995	pfam_FH3_dom,superfamily_ARM-type_fold	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_Drf_DAD,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DIAPH3	HGNC	ENSG00000139734	tier1	-	-	49	0	0.00	30	9	23.08
DICER1	0	genome.wustl.edu	37	14	95570269	95570269	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	95570269	95570269	G	A	SNP	DICER1	ENST00000343455	human	ensembl	74_37	-1	known	missense	c.3464	p.T1155M	0.001	NULL	pfam_RNase_III_dom,pfam_PAZ_dom,pfam_Dicer_dimerisation_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,superfamily_RNase_III_dom,superfamily_P-loop_NTPase,superfamily_PAZ_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_PAZ_dom,smart_RNase_III_dom,smart_dsRNA-bd_dom,pfscan_PAZ_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_dsRNA-bd_dom,pfscan_RNase_III_dom	-	no_errors	DICER1	HGNC	ENSG00000100697	tier1	-	-	37	0	0.00	38	17	30.91
DIEXF	0	genome.wustl.edu	37	1	210016856	210016856	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	210016856	210016856	G	A	SNP	DIEXF	ENST00000491415	human	ensembl	74_37	+1	known	silent	c.1842	p.T614	0.020	pfam_Digest_organ_expansion_fac-prd	pfam_Digest_organ_expansion_fac-prd,superfamily_P-loop_NTPase	-	no_errors	DIEXF	HGNC	ENSG00000117597	tier1	rs138167313	-	27	0	0.00	18	7	28.00
DKC1	0	genome.wustl.edu	37	X	153994771	153994771	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	153994771	153994771	A	-	DEL	DKC1	ENST00000473552	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DKC1	HGNC	ENSG00000130826	tier1			25	0	0.00	15	4	21.05
DLC1	0	genome.wustl.edu	37	8	12943086	12943087	+	RNA	DEL	TT	TT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	12943086	12943087	TT	-	DEL	DLC1	ENST00000510318	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	DLC1	HGNC	ENSG00000164741	tier1			42	0	0.00	51	7	12.07
DLC1	0	genome.wustl.edu	37	8	13072282	13072282	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	13072282	13072282	C	T	SNP	DLC1	ENST00000316609	human	ensembl	74_37	-1	known	silent	c.1350	p.A450	0.000	NULL	NULL	-	no_errors	DLC1	HGNC	ENSG00000164741	tier1	-	-	50	0	0.00	61	8	11.59
DLGAP4	0	genome.wustl.edu	37	20	35156540	35156541	+	RNA	DEL	TT	TT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	35156540	35156541	TT	-	DEL	DLGAP4	ENST00000475894	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010:0.004	-	-	-	no_errors	DLGAP4	HGNC	ENSG00000080845	tier1			69	0	0.00	36	36	50.00
DLK2	0	genome.wustl.edu	37	6	43419705	43419705	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	43419705	43419705	C	T	SNP	DLK2	ENST00000357338	human	ensembl	74_37	-1	known	missense	c.389	p.R130H	1.000	NULL	pfam_EG-like_dom,pfam_EGF_extracell,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	DLK2	HGNC	ENSG00000171462	tier1	-	-	35	0	0.00	22	17	43.59
DLX3	0	genome.wustl.edu	37	17	48069105	48069105	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	48069105	48069105	C	T	SNP	DLX3	ENST00000434704	human	ensembl	74_37	-1	known	missense	c.640	p.A214T	0.998	NULL	pfam_Distal-less_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DLX3	HGNC	ENSG00000064195	tier1	-	-	63	0	0.00	15	18	54.55
DLX6	0	genome.wustl.edu	37	7	96635385	96635385	+	Splice_Site	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	96635385	96635385	G	A	SNP	DLX6	ENST00000007660	human	ensembl	74_37	+1	known	splice_site	c.95+1	e1+1	0.997	-	-	-	no_errors	DLX6	HGNC	ENSG00000006377	tier1	-	-	62	0	0.00	46	10	17.86
DMD	0	genome.wustl.edu	37	X	32466646	32466646	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	32466646	32466646	T	-	DEL	DMD	ENST00000357033	human	ensembl	74_37	-1	known	frame_shift_del	c.3713	p.K1238fs	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1			72	0	0.00	54	9	14.29
DMD	0	genome.wustl.edu	37	X	32717262	32717262	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	32717262	32717262	A	-	DEL	DMD	ENST00000357033	human	ensembl	74_37	-1	known	frame_shift_del	c.798	p.Q267fs	0.087	pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1			94	0	0.00	47	22	31.88
DMTF1	0	genome.wustl.edu	37	7	86817539	86817539	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	86817539	86817539	G	T	SNP	DMTF1	ENST00000331242	human	ensembl	74_37	+1	known	missense	c.1333	p.A445S	0.994	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	DMTF1	HGNC	ENSG00000135164				108	0	0.00	74	5	6.33
DNA2	0	genome.wustl.edu	37	10	70209862	70209862	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	70209862	70209862	A	G	SNP	DNA2	ENST00000399180	human	ensembl	74_37	-1	known	missense	c.1120	p.Y374H	0.000	NULL	pfam_DNA_replication_fac_Dna2_N,superfamily_P-loop_NTPase	-	no_errors	DNA2	HGNC	ENSG00000138346	tier1	-	-	85	0	0.00	78	11	12.36
DNAH10	0	genome.wustl.edu	37	12	124265628	124265628	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	124265628	124265628	T	-	DEL	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	frame_shift_del	c.440	p.L149fs	0.969	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	tier1			37	0	0.00	28	7	20.00
DNAH10	0	genome.wustl.edu	37	12	124325934	124325934	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	124325934	124325934	G	A	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	silent	c.4848	p.A1616	0.995	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	tier1	-	-	48	0	0.00	36	11	23.40
DNAH10	0	genome.wustl.edu	37	12	124272528	124272528	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	124272528	124272528	G	T	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	missense	c.1416	p.Q472H	1.000	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653				69	0	0.00	49	4	7.55
DNAH11	0	genome.wustl.edu	37	7	21646139	21646140	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	21646139	21646140	0	A	INS	DNAH11	ENST00000328843	human	ensembl	74_37	+1	known	frame_shift_ins	c.3744_3745	p.C1250fs	1.000:1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH11	HGNC	ENSG00000105877				119	0	0.00	105	9	7.89
DNAH14	0	genome.wustl.edu	37	1	225267204	225267204	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	225267204	225267204	C	T	SNP	DNAH14	ENST00000430092	human	ensembl	74_37	+1	known	missense	c.2720	p.A907V	0.002	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Tautomerase/MIF_sf,smart_AAA+_ATPase	-	no_errors	DNAH14	HGNC	ENSG00000185842	tier1	-	-	47	0	0.00	49	11	18.33
DNAH2	0	genome.wustl.edu	37	17	7646597	7646597	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	7646597	7646597	T	-	DEL	DNAH2	ENST00000082259	human	ensembl	74_37	+1	known	frame_shift_del	c.2287	p.S766fs	0.000	NULL	pfam_Dynein_heavy_dom-1	-	no_errors	DNAH2	HGNC	ENSG00000183914	tier1			44	0	0.00	41	12	22.64
DNAH3	0	genome.wustl.edu	37	16	21136676	21136676	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	21136676	21136676	G	A	SNP	DNAH3	ENST00000261383	human	ensembl	74_37	-1	known	silent	c.1224	p.C408	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486	tier1	-	-	37	0	0.00	32	10	23.81
DNAH3	0	genome.wustl.edu	37	16	21128571	21128572	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	21128571	21128572	0	A	INS	DNAH3	ENST00000261383	human	ensembl	74_37	-1	known	frame_shift_ins	c.1767_1766	p.L589fs	0.102:0.122	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486				44	0	0.00	47	7	12.96
DNAH5	0	genome.wustl.edu	37	5	13864702	13864702	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	13864702	13864702	A	-	DEL	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	frame_shift_del	c.4400	p.L1467fs	0.990	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1			60	0	0.00	56	7	11.11
DNAH6	0	genome.wustl.edu	37	2	84752796	84752796	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	84752796	84752796	A	-	DEL	DNAH6	ENST00000237449	human	ensembl	74_37	+1	known	frame_shift_del	c.333	p.S114fs	0.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH6	HGNC	ENSG00000115423	tier1			72	0	0.00	64	8	11.11
DNAJB6	0	genome.wustl.edu	37	7	157208759	157208761	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	157208759	157208761	GAA	-	DEL	DNAJB6	ENST00000262177	human	ensembl	74_37	+1	known	in_frame_del	c.948_950	p.K320in_frame_del	0.982:1.000:1.000	NULL	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB6	HGNC	ENSG00000105993	tier1			49	0	0.00	32	16	33.33
DNASE1	0	genome.wustl.edu	37	16	3713375	3713375	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	3713375	3713375	G	A	SNP	DNASE1	ENST00000575152	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DNASE1	HGNC	ENSG00000213918	tier1	-	-	32	0	0.00	18	6	25.00
DNM1P34	0	genome.wustl.edu	37	15	75593356	75593356	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	75593356	75593356	C	T	SNP	DNM1P34	ENST00000567292	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	DNM1P34	HGNC	ENSG00000260357				24	0	0.00	22	6	21.43
DNM3	0	genome.wustl.edu	37	1	171810847	171810847	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	171810847	171810847	G	T	SNP	DNM3	ENST00000358155	human	ensembl	74_37	+1	known	missense	c.51	p.Q17H	1.000	superfamily_P-loop_NTPase,smart_Dynamin_GTPase	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin_SF	-	no_errors	DNM3	HGNC	ENSG00000197959	tier1	-	-	132	0	0.00	103	26	20.16
DNMT1	0	genome.wustl.edu	37	19	10254537	10254537	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	10254537	10254537	G	A	SNP	DNMT1	ENST00000359526	human	ensembl	74_37	-1	known	silent	c.3021	p.Y1007	1.000	pirsf_DNA_C5-MeTrfase_1_euk,pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	pirsf_DNA_C5-MeTrfase_1_euk,pfam_C5_MeTfrase,pfam_BAH_dom,pfam_Cytosine_MeTrfase1_RFD,pfam_DMAP1-bd,pfam_Znf_CXXC,smart_BAH_dom,prints_C5_MeTfrase,pfscan_BAH_dom,pfscan_Znf_CXXC	-	no_errors	DNMT1	HGNC	ENSG00000130816				45	0	0.00	46	6	11.54
DNTTIP2	0	genome.wustl.edu	37	1	94337659	94337659	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	94337659	94337659	T	-	DEL	DNTTIP2	ENST00000436063	human	ensembl	74_37	-1	known	frame_shift_del	c.2036	p.N679fs	1.000	pfam_Fcf2	pfam_Fcf2	-	no_errors	DNTTIP2	HGNC	ENSG00000067334	tier1			91	0	0.00	70	12	14.63
DOC2A	0	genome.wustl.edu	37	16	30018407	30018407	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	30018407	30018407	G	A	SNP	DOC2A	ENST00000350119	human	ensembl	74_37	-1	known	missense	c.659	p.A220V	0.995	superfamily_C2_dom,pirsf_Doc2	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pirsf_Doc2,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_dom	-	no_errors	DOC2A	HGNC	ENSG00000149927	tier1	-	-	65	0	0.00	50	23	31.51
DOCK1	0	genome.wustl.edu	37	10	129242496	129242496	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	129242496	129242496	C	T	SNP	DOCK1	ENST00000280333	human	ensembl	74_37	+1	known	missense	c.5303	p.P1768L	0.997	NULL	pfam_DOCK_C,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,superfamily_Cyt_c-like_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK1	HGNC	ENSG00000150760	tier1	-	-	38	0	0.00	40	5	11.11
DOCK2	0	genome.wustl.edu	37	5	169484630	169484630	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	169484630	169484630	C	T	SNP	DOCK2	ENST00000256935	human	ensembl	74_37	+1	known	missense	c.4427	p.P1476L	1.000	pfam_DOCK_C	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Cyt_c-like_dom,superfamily_ARM-type_fold,superfamily_Ferritin-like_SF,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK2	HGNC	ENSG00000134516	tier1	-	-	57	0	0.00	39	8	17.02
DOCK3	0	genome.wustl.edu	37	3	51264793	51264793	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	51264793	51264793	G	T	SNP	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	missense	c.1457	p.R486L	1.000	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538	tier1	-	-	63	0	0.00	62	4	6.06
DOCK3	0	genome.wustl.edu	37	3	51417604	51417604	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	51417604	51417604	C	-	DEL	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	frame_shift_del	c.5549	p.P1852fs	0.115	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538	tier1			45	0	0.00	27	11	28.95
DOCK6	0	genome.wustl.edu	37	19	11319375	11319375	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	11319375	11319375	C	T	SNP	DOCK6	ENST00000294618	human	ensembl	74_37	-1	known	missense	c.5075	p.G1692D	0.954	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N	-	no_errors	DOCK6	HGNC	ENSG00000130158	tier1	-	-	20	0	0.00	18	6	25.00
DOCK6	0	genome.wustl.edu	37	19	11332655	11332655	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	11332655	11332655	C	A	SNP	DOCK6	ENST00000294618	human	ensembl	74_37	-1	known	missense	c.3422	p.S1141I	0.998	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N	-	no_errors	DOCK6	HGNC	ENSG00000130158				24	0	0.00	14	2	12.50
DOCK8	0	genome.wustl.edu	37	9	289570	289570	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	289570	289570	C	T	SNP	DOCK8	ENST00000453981	human	ensembl	74_37	+1	known	silent	c.393	p.I131	0.922	pfam_DOCK_C/D_N	pfam_DOCK_C,pfam_DOCK_C/D_N,superfamily_ARM-type_fold	-	no_errors	DOCK8	HGNC	ENSG00000107099	tier1	rs139097471	-	85	0	0.00	74	11	12.94
DOCK8	0	genome.wustl.edu	37	9	328099	328099	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	328099	328099	C	T	SNP	DOCK8	ENST00000453981	human	ensembl	74_37	+1	known	silent	c.972	p.A324	0.014	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,superfamily_ARM-type_fold	-	no_errors	DOCK8	HGNC	ENSG00000107099	tier1	-	-	49	0	0.00	49	9	15.52
DOPEY2	0	genome.wustl.edu	37	21	37618129	37618129	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	37618129	37618129	G	A	SNP	DOPEY2	ENST00000399151	human	ensembl	74_37	+1	known	missense	c.3851	p.R1284H	1.000	NULL	pfam_Dopey_N	-	no_errors	DOPEY2	HGNC	ENSG00000142197	tier1	-	-	41	0	0.00	29	5	14.71
DOPEY2	0	genome.wustl.edu	37	21	37661367	37661367	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	37661367	37661367	G	A	SNP	DOPEY2	ENST00000399151	human	ensembl	74_37	+1	known	silent	c.6378	p.T2126	0.000	NULL	pfam_Dopey_N	-	no_errors	DOPEY2	HGNC	ENSG00000142197	tier1	rs148971960	-	42	0	0.00	35	9	20.45
DPCR1	0	genome.wustl.edu	37	6	30917619	30917619	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	30917619	30917619	C	T	SNP	DPCR1	ENST00000462446	human	ensembl	74_37	+1	novel	missense	c.1378	p.P460S	0.012	NULL	NULL	-	no_errors	DPCR1	HGNC	ENSG00000168631	tier1	-	-	76	0	0.00	71	12	14.46
DPF3	0	genome.wustl.edu	37	14	73137370	73137370	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	73137370	73137370	A	-	DEL	DPF3	ENST00000557704	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.953	-	-	-	no_errors	DPF3	HGNC	ENSG00000205683	tier1			65	0	0.00	57	14	19.72
DPF3	0	genome.wustl.edu	37	14	73137761	73137762	+	RNA	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	73137761	73137762	-	A	INS	DPF3	ENST00000557704	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.991:0.001	-	-	-	no_errors	DPF3	HGNC	ENSG00000205683	tier1			37	0	0.00	26	5	16.13
DPF3	0	genome.wustl.edu	37	14	73159862	73159862	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	73159862	73159862	G	T	SNP	DPF3	ENST00000366353	human	ensembl	74_37	-1	known	missense	c.829	p.L277M	1.000	pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	DPF3	HGNC	ENSG00000205683	tier1	-	-	129	0	0.00	92	21	18.58
DPYD	0	genome.wustl.edu	37	1	98060679	98060679	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	98060679	98060679	C	T	SNP	DPYD	ENST00000370192	human	ensembl	74_37	-1	known	silent	c.894	p.T298	0.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	pfam_Dihydroorotate_DH_1_2,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_tRNA_hU_synthase,superfamily_Helical_ferredxn,prints_FAD_pyr_nucl-diS_OxRdtase,tigrfam_Dihydroorotate_DH	-	no_errors	DPYD	HGNC	ENSG00000188641	tier1	rs61758443	-	46	0	0.00	48	8	14.29
DPYSL4	0	genome.wustl.edu	37	10	134013961	134013961	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	134013961	134013961	C	-	DEL	DPYSL4	ENST00000338492	human	ensembl	74_37	+1	known	frame_shift_del	c.913	p.P306fs	1.000	pfam_Amidohydro_1,tigrfam_Hydantoinase/dihydroPyrase	pfam_Amidohydro_1,superfamily_Metal-dep_hydrolase_composite,tigrfam_Hydantoinase/dihydroPyrase	-	no_errors	DPYSL4	HGNC	ENSG00000151640	tier1			76	0	0.00	61	15	19.74
DRD1	0	genome.wustl.edu	37	5	174869161	174869161	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	174869161	174869161	G	A	SNP	DRD1	ENST00000393752	human	ensembl	74_37	-1	known	silent	c.942	p.D314	0.059	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Dopamine_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Dopamine_D1_rcpt,prints_GPCR_Rhodpsn,prints_Dopamine_rcpt,prints_ADR_fam	-	no_errors	DRD1	HGNC	ENSG00000184845	tier1	-	-	30	0	0.00	15	10	40.00
DRGX	0	genome.wustl.edu	37	10	50594790	50594790	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	50594790	50594790	T	A	SNP	DRGX	ENST00000434016	human	ensembl	74_37	-1	known	missense	c.364	p.I122F	1.000	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	DRGX	HGNC	ENSG00000165606	tier1	-	-	86	0	0.00	45	22	32.84
DSC3	0	genome.wustl.edu	37	18	28605749	28605749	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	28605749	28605749	G	A	SNP	DSC3	ENST00000360428	human	ensembl	74_37	-1	known	missense	c.607	p.R203C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin,prints_Desmosomal_cadherin	-	no_errors	DSC3	HGNC	ENSG00000134762	tier1	-	-	44	0	0.00	50	7	12.28
DSN1	0	genome.wustl.edu	37	20	35399448	35399448	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	35399448	35399448	T	-	DEL	DSN1	ENST00000373745	human	ensembl	74_37	-1	known	frame_shift_del	c.183	p.G63fs	0.000	NULL	pfam_Dsn1/Mis13	-	no_errors	DSN1	HGNC	ENSG00000149636	tier1			61	0	0.00	40	13	24.53
DSP	0	genome.wustl.edu	37	6	7574376	7574376	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	7574376	7574376	C	A	SNP	DSP	ENST00000379802	human	ensembl	74_37	+1	known	missense	c.2188	p.L730I	0.998	NULL	pfam_Plectin_repeat,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	DSP	HGNC	ENSG00000096696	tier1	-	-	45	0	0.00	28	16	36.36
DTHD1	0	genome.wustl.edu	37	4	36345167	36345167	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	36345167	36345167	C	A	SNP	DTHD1	ENST00000456874	human	ensembl	74_37	+1	known	silent	c.2067	p.L689	0.939	pfam_Death_domain,superfamily_DEATH-like_dom	pfam_Death_domain,superfamily_DEATH-like_dom,pfscan_Death_domain	-	no_errors	DTHD1	HGNC	ENSG00000197057				23	0	0.00	33	7	17.50
DTWD1	0	genome.wustl.edu	37	15	49935658	49935658	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	49935658	49935658	A	G	SNP	DTWD1	ENST00000251250	human	ensembl	74_37	+1	known	silent	c.798	p.L266	0.988	pfam_DTW	pfam_DTW	-	no_errors	DTWD1	HGNC	ENSG00000104047				50	0	0.00	40	3	6.98
DUSP10	0	genome.wustl.edu	37	1	221875662	221875662	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	221875662	221875662	A	-	DEL	DUSP10	ENST00000468085	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.040	-	-	-	no_errors	DUSP10	HGNC	ENSG00000143507	tier1			25	0	0.00	11	11	50.00
DUSP9	0	genome.wustl.edu	37	X	152915674	152915674	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	152915674	152915674	G	-	DEL	DUSP9	ENST00000342782	human	ensembl	74_37	+1	known	frame_shift_del	c.1069	p.Q359fs	0.150	pirsf_MKP	pfam_Dual-sp_phosphatase_cat-dom,pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,smart_Dual-sp_phosphatase_subgr_cat,pirsf_MKP,pfscan_Rhodanese-like_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat,prints_MKP	-	no_errors	DUSP9	HGNC	ENSG00000130829	tier1			60	0	0.00	50	12	19.35
DYM	0	genome.wustl.edu	37	18	46690133	46690133	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	46690133	46690133	T	-	DEL	DYM	ENST00000269445	human	ensembl	74_37	-1	known	frame_shift_del	c.1485	p.K495fs	0.906	pfam_Dymeclin,superfamily_ARM-type_fold	pfam_Dymeclin,superfamily_ARM-type_fold	-	no_errors	DYM	HGNC	ENSG00000141627	tier1			48	0	0.00	42	5	10.64
DYNC1I2	0	genome.wustl.edu	37	2	172546762	172546762	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	172546762	172546762	A	-	DEL	DYNC1I2	ENST00000397119	human	ensembl	74_37	+1	known	frame_shift_del	c.97	p.E36fs	1.000	NULL	pfam_Dynein_IC_1/2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DYNC1I2	HGNC	ENSG00000077380	tier1			47	0	0.00	60	17	22.08
DYRK1B	0	genome.wustl.edu	37	19	40317456	40317456	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	40317456	40317456	G	-	DEL	DYRK1B	ENST00000323039	human	ensembl	74_37	-1	known	frame_shift_del	c.1267	p.L423fs	0.864	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK1B	HGNC	ENSG00000105204	tier1			50	0	0.00	28	5	15.15
DYSF	0	genome.wustl.edu	37	2	71681137	71681137	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	71681137	71681137	G	A	SNP	DYSF	ENST00000413539	human	ensembl	74_37	+1	known	silent	c.9	p.R3	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	DYSF	HGNC	ENSG00000135636	tier1	-	-	94	0	0.00	91	6	6.19
E2F2	0	genome.wustl.edu	37	1	23845519	23845519	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	23845519	23845519	C	T	SNP	E2F2	ENST00000361729	human	ensembl	74_37	-1	known	missense	c.841	p.D281N	0.998	NULL	pfam_E2F_TDP	-	no_errors	E2F2	HGNC	ENSG00000007968	tier1	-	-	34	0	0.00	25	5	16.67
EAPP	0	genome.wustl.edu	37	14	35008585	35008585	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	35008585	35008585	C	-	DEL	EAPP	ENST00000555705	human	ensembl	74_37	-1	known	frame_shift_del	c.250	p.E84fs	0.044	NULL	NULL	-	no_errors	EAPP	HGNC	ENSG00000129518	tier1			25	0	0.00	29	8	21.62
EBF1	0	genome.wustl.edu	37	5	158204526	158204526	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	158204526	158204526	G	A	SNP	EBF1	ENST00000313708	human	ensembl	74_37	-1	known	missense	c.931	p.R311C	1.000	pfam_IPT,superfamily_Ig_E-set,smart_IPT	pfam_IPT,superfamily_Ig_E-set,superfamily_bHLH_dom,smart_IPT	-	no_errors	EBF1	HGNC	ENSG00000164330	tier1	-	-	32	0	0.00	30	18	37.50
EEF2K	0	genome.wustl.edu	37	16	22262606	22262606	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	22262606	22262606	G	-	DEL	EEF2K	ENST00000263026	human	ensembl	74_37	+1	known	frame_shift_del	c.581	p.E196fs	1.000	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pirsf_Elongation_factor_2_kinase,pfscan_MHCK_EF2_kinase	pfam_MHCK_EF2_kinase,pfam_Sel1-like,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pirsf_Elongation_factor_2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	EEF2K	HGNC	ENSG00000103319	tier1			30	0	0.00	25	3	10.71
EFCAB13	0	genome.wustl.edu	37	17	45473323	45473323	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	45473323	45473323	T	C	SNP	EFCAB13	ENST00000331493	human	ensembl	74_37	+1	known	missense	c.1925	p.L642S	0.012	NULL	NULL	-	no_errors	EFCAB13	HGNC	ENSG00000178852	tier1	-	-	45	0	0.00	36	9	20.00
EFEMP2	0	genome.wustl.edu	37	11	65638861	65638861	+	Silent	SNP	G	G	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	65638861	65638861	G	C	SNP	EFEMP2	ENST00000533347	human	ensembl	74_37	-1	known	silent	c.180	p.G60	1.000	NULL	NULL	-	no_errors	EFEMP2	HGNC	ENSG00000172638	tier1	-	-	45	0	0.00	50	15	23.08
EFNB3	0	genome.wustl.edu	37	17	7608923	7608923	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	7608923	7608923	C	-	DEL	EFNB3	ENST00000226091	human	ensembl	74_37	+1	known	frame_shift_del	c.7	p.H5fs	0.965	NULL	pfam_Ephrin,superfamily_Cupredoxin,prints_Ephrin	-	no_errors	EFNB3	HGNC	ENSG00000108947	tier1			79	0	0.00	58	16	21.62
EGFLAM	0	genome.wustl.edu	37	5	38464038	38464038	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	38464038	38464038	G	A	SNP	EGFLAM	ENST00000354891	human	ensembl	74_37	+1	known	missense	c.3004	p.V1002M	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Fibronectin_type3,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Laminin_G	-	no_errors	EGFLAM	HGNC	ENSG00000164318	tier1	-	-	40	0	0.00	35	7	16.67
EGFR	0	genome.wustl.edu	37	7	55224336	55224336	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	55224336	55224336	C	T	SNP	EGFR	ENST00000275493	human	ensembl	74_37	+1	known	missense	c.1117	p.P373S	0.893	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_EGF_rcpt_L	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	EGFR	HGNC	ENSG00000146648	tier1	-	-	47	0	0.00	42	17	28.81
EGLN2	0	genome.wustl.edu	37	19	41306746	41306746	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	41306746	41306746	C	T	SNP	EGLN2	ENST00000303961	human	ensembl	74_37	+1	known	missense	c.269	p.P90L	0.992	NULL	pfam_Oxoglu/Fe-dep_dioxygenase,smart_Pro_4_hyd_alph	-	no_errors	EGLN2	HGNC	ENSG00000269858				45	0	0.00	22	4	15.38
EGR1	0	genome.wustl.edu	37	5	137802682	137802682	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	137802682	137802682	G	A	SNP	EGR1	ENST00000239938	human	ensembl	74_37	+1	known	missense	c.544	p.A182T	0.993	pfam_DUF3446	pfam_DUF3432,pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR1	HGNC	ENSG00000120738				77	0	0.00	53	3	5.36
EHD2	0	genome.wustl.edu	37	19	48219925	48219925	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	48219925	48219925	G	A	SNP	EHD2	ENST00000263277	human	ensembl	74_37	+1	known	missense	c.56	p.R19H	1.000	NULL	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase,smart_EPS15_homology,pfscan_EF_hand_dom,pfscan_EPS15_homology	-	no_errors	EHD2	HGNC	ENSG00000024422	tier1	-	-	60	0	0.00	75	8	9.64
EHMT1	0	genome.wustl.edu	37	9	140707552	140707552	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	140707552	140707552	G	A	SNP	EHMT1	ENST00000460843	human	ensembl	74_37	+1	known	missense	c.2962	p.A988T	0.825	smart_Ankyrin_rpt	pfam_Ankyrin_rpt,pfam_SET_dom,pfam_Pre-SET_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,prints_Ankyrin_rpt	-	no_errors	EHMT1	HGNC	ENSG00000181090	tier1	-	-	70	0	0.00	59	18	23.08
EIF2AK4	0	genome.wustl.edu	37	15	40241361	40241361	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	40241361	40241361	C	T	SNP	EIF2AK4	ENST00000263791	human	ensembl	74_37	+1	known	silent	c.405	p.S135	0.329	superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,pirsf_Ser/Thr_kinase_GCN2,pfscan_RWD-domain	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RWD-domain,superfamily_Kinase-like_dom,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Anticodon-bd,smart_RWD-domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_GCN2,pfscan_RWD-domain,pfscan_Prot_kinase_dom	-	no_errors	EIF2AK4	HGNC	ENSG00000128829	tier1	-	-	82	0	0.00	62	5	7.46
EIF2AK4	0	genome.wustl.edu	37	15	40318214	40318214	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	40318214	40318214	C	T	SNP	EIF2AK4	ENST00000263791	human	ensembl	74_37	+1	known	missense	c.4426	p.R1476C	1.000	superfamily_Anticodon-bd,pirsf_Ser/Thr_kinase_GCN2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RWD-domain,superfamily_Kinase-like_dom,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Anticodon-bd,smart_RWD-domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_GCN2,pfscan_RWD-domain,pfscan_Prot_kinase_dom	-	no_errors	EIF2AK4	HGNC	ENSG00000128829	tier1	-	-	47	0	0.00	25	22	46.81
EIF2B3	0	genome.wustl.edu	37	1	45407182	45407182	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	45407182	45407182	T	-	DEL	EIF2B3	ENST00000360403	human	ensembl	74_37	-1	known	frame_shift_del	c.450	p.A151fs	0.997	NULL	pfam_NTP_transferase	-	no_errors	EIF2B3	HGNC	ENSG00000070785	tier1			66	0	0.00	39	14	26.42
EIF3J	0	genome.wustl.edu	37	15	44829562	44829562	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	44829562	44829562	G	-	DEL	EIF3J	ENST00000261868	human	ensembl	74_37	+1	known	frame_shift_del	c.84	p.G30fs	0.997	pfam_eIF3j	pfam_eIF3j	-	no_errors	EIF3J	HGNC	ENSG00000104131	tier1			27	0	0.00	33	4	10.81
EIF3K	0	genome.wustl.edu	37	19	39127545	39127545	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	39127545	39127545	G	T	SNP	EIF3K	ENST00000248342	human	ensembl	74_37	+1	known	missense	c.642	p.M214I	1.000	NULL	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25,superfamily_ARM-type_fold	-	no_errors	EIF3K	HGNC	ENSG00000178982	tier1	-	-	114	0	0.00	75	22	22.68
ELAVL3	0	genome.wustl.edu	37	19	11565666	11565666	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	11565666	11565666	G	A	SNP	ELAVL3	ENST00000359227	human	ensembl	74_37	-1	known	missense	c.779	p.S260L	1.000	tigrfam_ELAD_HUD_SF	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL3	HGNC	ENSG00000196361	tier1	-	-	48	0	0.00	49	8	14.04
ELMO1	0	genome.wustl.edu	37	7	37251076	37251076	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	37251076	37251076	G	A	SNP	ELMO1	ENST00000310758	human	ensembl	74_37	-1	known	missense	c.1001	p.A334V	0.992	pfam_Engulfment_cell_motility_ELMO	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO1	HGNC	ENSG00000155849	tier1	-	-	63	0	0.00	49	7	12.50
ELN	0	genome.wustl.edu	37	7	73470749	73470749	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	73470749	73470749	G	A	SNP	ELN	ENST00000358929	human	ensembl	74_37	+1	known	silent	c.1299	p.P433	0.075	NULL	prints_Tropoelastin	-	no_errors	ELN	HGNC	ENSG00000049540	tier1	-	-	82	0	0.00	80	13	13.98
ELOVL1	0	genome.wustl.edu	37	1	43830364	43830364	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	43830364	43830364	A	G	SNP	ELOVL1	ENST00000496932	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ELOVL1	HGNC	ENSG00000066322	tier1	-	-	42	0	0.00	29	7	19.44
EMC10	0	genome.wustl.edu	37	19	50985132	50985132	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	50985132	50985132	G	-	DEL	EMC10	ENST00000376918	human	ensembl	74_37	+1	known	frame_shift_del	c.693	p.A234fs	1.000	NULL	NULL	-	no_errors	EMC10	HGNC	ENSG00000161671	tier1			82	0	0.00	80	20	20.00
EML2	0	genome.wustl.edu	37	19	46129994	46129994	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	46129994	46129994	C	-	DEL	EML2	ENST00000587152	human	ensembl	74_37	-1	known	frame_shift_del	c.1313	p.G438fs	0.991	superfamily_Quinonprotein_ADH-like_supfam,pfscan_WD40_repeat_dom	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_Quinoprot_gluc/sorb_DH,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML2	HGNC	ENSG00000125746	tier1			95	0	0.00	76	12	13.64
EML4	0	genome.wustl.edu	37	2	42511825	42511825	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	42511825	42511825	C	T	SNP	EML4	ENST00000318522	human	ensembl	74_37	+1	known	silent	c.993	p.G331	1.000	superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML4	HGNC	ENSG00000143924	tier1	-	-	73	0	0.00	64	11	14.67
EML4	0	genome.wustl.edu	37	2	42557031	42557031	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	42557031	42557031	C	T	SNP	EML4	ENST00000318522	human	ensembl	74_37	+1	known	missense	c.2630	p.A877V	0.000	NULL	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML4	HGNC	ENSG00000143924	tier1	-	-	53	0	0.00	23	8	25.81
EML5	0	genome.wustl.edu	37	14	89163272	89163272	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	89163272	89163272	T	C	SNP	EML5	ENST00000554922	human	ensembl	74_37	-1	known	missense	c.2263	p.I755V	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_HELP,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML5	HGNC	ENSG00000165521	tier1	-	-	51	0	0.00	62	9	12.68
EML5	0	genome.wustl.edu	37	14	89181397	89181398	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	89181397	89181398	-	T	INS	EML5	ENST00000554922	human	ensembl	74_37	-1	known	frame_shift_ins	c.1330_1329	p.V443fs	0.989:0.969	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_HELP,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML5	HGNC	ENSG00000165521	tier1			54	0	0.00	41	16	28.07
EMR4P	0	genome.wustl.edu	37	19	6952853	6952853	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	6952853	6952853	G	A	SNP	EMR4P	ENST00000600751	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EMR4P	HGNC	ENSG00000268758	tier1	-	-	24	0	0.00	5	3	37.50
EMX1	0	genome.wustl.edu	37	2	73143905	73143905	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	73143905	73143905	G	T	SNP	EMX1	ENST00000394111	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EMX1	HGNC	ENSG00000135638	tier1	-	-	38	0	0.00	23	10	28.57
EMX2	0	genome.wustl.edu	37	10	119308258	119308258	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	119308258	119308258	T	C	SNP	EMX2	ENST00000546446	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	EMX2	HGNC	ENSG00000170370	tier1	-	-	73	0	0.00	41	24	36.92
EN1	0	genome.wustl.edu	37	2	119603905	119603905	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	119603905	119603905	C	T	SNP	EN1	ENST00000295206	human	ensembl	74_37	-1	known	missense	c.839	p.R280H	0.943	NULL	pfam_Homeobox_dom,pfam_Homeobox-engrailed_C-terminal,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeodomain_engrailed,prints_Homeobox_metazoa,prints_Antifreeze_1,prints_K_chnl_volt-dep_Kv1.4	-	no_errors	EN1	HGNC	ENSG00000163064				14	0	0.00	10	3	23.08
ENHO	0	genome.wustl.edu	37	9	34521524	34521524	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	34521524	34521524	G	T	SNP	ENHO	ENST00000399775	human	ensembl	74_37	-1	known	missense	c.170	p.P57H	1.000	NULL	NULL	-	no_errors	ENHO	HGNC	ENSG00000168913	tier1	-	-	59	0	0.00	36	11	22.92
ENO2	0	genome.wustl.edu	37	12	7026786	7026786	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	7026786	7026786	G	A	SNP	ENO2	ENST00000229277	human	ensembl	74_37	+1	known	missense	c.352	p.V118M	0.997	pfam_Enolase_N,pirsf_Enolase,prints_Enolase,tigrfam_Enolase	pfam_Enolase_C,pfam_Enolase_N,pfam_MeAsp_NH4-lyase_C,pirsf_Enolase,prints_Enolase,tigrfam_Enolase	-	no_errors	ENO2	HGNC	ENSG00000111674	tier1	-	-	49	0	0.00	55	4	6.78
ENPEP	0	genome.wustl.edu	37	4	111397885	111397885	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	111397885	111397885	C	T	SNP	ENPEP	ENST00000265162	human	ensembl	74_37	+1	known	silent	c.315	p.H105	0.780	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ENPEP	HGNC	ENSG00000138792	tier1	-	-	36	0	0.00	23	6	20.69
ENSG00000167765	0	genome.wustl.edu	37	19	52097515	52097515	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	52097515	52097515	C	A	SNP	ENSG00000167765	ENST00000301439	human	ensembl	74_37	-1	known	silent	c.60	p.A20	0.000	NULL	NULL	-	no_errors	AC018755.1	Clone_based_ensembl_gene	ENSG00000167765	tier1	-	-	38	0	0.00	37	4	9.76
ENSG00000183154	0	genome.wustl.edu	37	8	37593487	37593487	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	37593487	37593487	A	-	DEL	ENSG00000183154	ENST00000330539	human	ensembl	74_37	-1	putative	frame_shift_del	c.529	p.S177fs	0.002	NULL	NULL	-	no_errors	RP11-863K10.7	Clone_based_vega_gene	ENSG00000183154	tier1			20	0	0.00	22	6	21.43
ENSG00000187695	0	genome.wustl.edu	37	3	128664075	128664075	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	128664075	128664075	C	T	SNP	ENSG00000187695	ENST00000508239	human	ensembl	74_37	-1	known	silent	c.735	p.Q245	1.000	NULL	NULL	-	no_errors	RP11-723O4.6	Clone_based_vega_gene	ENSG00000187695				25	0	0.00	19	2	9.52
ENSG00000200294	0	genome.wustl.edu	37	10	73940733	73940733	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	73940733	73940733	T	-	DEL	ENSG00000200294	ENST00000363424	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.371	-	-	-	no_errors	SNORA36	RFAM	ENSG00000200294	tier1			22	0	0.00	14	4	22.22
ENSG00000203394	0	genome.wustl.edu	37	1	21069688	21069688	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	21069688	21069688	A	-	DEL	ENSG00000203394	ENST00000413451	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP5-930J4.4	Clone_based_vega_gene	ENSG00000203394	tier1			72	0	0.00	60	13	17.81
ENSG00000204792	0	genome.wustl.edu	37	2	75157506	75157506	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	75157506	75157506	G	A	SNP	ENSG00000204792	ENST00000377469	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	AC104135.3	Clone_based_vega_gene	ENSG00000204792				25	0	0.00	33	7	17.50
ENSG00000205414	0	genome.wustl.edu	37	16	50640591	50640591	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	50640591	50640591	C	T	SNP	ENSG00000205414	ENST00000379963	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-401P9.6	Clone_based_vega_gene	ENSG00000205414	tier1	rs201124591	-	11	0	0.00	9	4	30.77
ENSG00000212857	0	genome.wustl.edu	37	GL000212.1	64490	64490	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	GL000212.1	64490	64490	C	T	SNP	ENSG00000212857	ENST00000391545	human	ensembl	74_37	+1	known	missense	c.239	p.P80L	NULL	NULL	NULL	-	no_errors	AL356585.1	Clone_based_ensembl_gene	ENSG00000212857	tier1	-	-	73	0	0.00	43	19	30.65
ENSG00000212857	0	genome.wustl.edu	37	GL000212.1	64846	64846	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	GL000212.1	64846	64846	C	T	SNP	ENSG00000212857	ENST00000391545	human	ensembl	74_37	+1	known	missense	c.595	p.P199S	NULL	NULL	NULL	-	no_errors	AL356585.1	Clone_based_ensembl_gene	ENSG00000212857	tier1	-	-	96	0	0.00	86	13	13.00
ENSG00000212857	0	genome.wustl.edu	37	GL000212.1	65483	65483	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	GL000212.1	65483	65483	C	T	SNP	ENSG00000212857	ENST00000391545	human	ensembl	74_37	+1	known	missense	c.1232	p.T411M	NULL	NULL	NULL	-	no_errors	AL356585.1	Clone_based_ensembl_gene	ENSG00000212857	tier1	-	-	82	0	0.00	52	11	17.46
ENSG00000214796	0	genome.wustl.edu	37	1	202822385	202822385	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	202822385	202822385	G	-	DEL	ENSG00000214796	ENST00000443294	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.272	-	-	-	no_errors	RP11-480I12.5	Clone_based_vega_gene	ENSG00000214796	tier1			53	0	0.00	32	10	23.81
ENSG00000214797	0	genome.wustl.edu	37	11	59038011	59038012	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	59038011	59038012	AA	-	DEL	ENSG00000214797	ENST00000399003	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-1036E20.9	Clone_based_vega_gene	ENSG00000214797	tier1			40	0	0.00	32	6	15.79
ENSG00000215428	0	genome.wustl.edu	37	9	133278211	133278211	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	133278211	133278211	G	A	SNP	ENSG00000215428	ENST00000277491	human	ensembl	74_37	+1	novel	missense	c.157	p.A53T	0.056	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub2,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub2,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	AL354898.1	Clone_based_ensembl_gene	ENSG00000215428	tier1	-	-	50	0	0.00	41	16	28.07
ENSG00000215953	0	genome.wustl.edu	37	5	84823872	84823872	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	84823872	84823872	G	A	SNP	ENSG00000215953	ENST00000401134	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	AC026700.1	Clone_based_ensembl_gene	ENSG00000215953	tier1	-	-	43	0	0.00	42	7	14.29
ENSG00000221219	0	genome.wustl.edu	37	4	54969782	54969782	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	54969782	54969782	A	G	SNP	ENSG00000221219	ENST00000408292	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AC110298.1	Clone_based_ensembl_gene	ENSG00000221219	tier1	rs56366082	-	41	0	0.00	26	8	22.86
ENSG00000221580	0	genome.wustl.edu	37	16	35136394	35136394	+	RNA	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	35136394	35136394	A	C	SNP	ENSG00000221580	ENST00000408653	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.094	-	-	-	no_errors	AC116553.1	Clone_based_ensembl_gene	ENSG00000221580	tier1	-	-	68	0	0.00	40	17	29.82
ENSG00000221660	0	genome.wustl.edu	37	8	68623877	68623877	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	68623877	68623877	T	C	SNP	ENSG00000221660	ENST00000408733	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AC022861.1	Clone_based_ensembl_gene	ENSG00000221660	tier1	-	-	45	0	0.00	35	4	10.26
ENSG00000221684	0	genome.wustl.edu	37	X	70979278	70979278	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	70979278	70979278	A	G	SNP	ENSG00000221684	ENST00000408757	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	BX276092.1	Clone_based_ensembl_gene	ENSG00000221684	tier1	-	-	78	0	0.00	14	6	30.00
ENSG00000223730	0	genome.wustl.edu	37	22	45298176	45298177	+	RNA	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	45298176	45298177	-	A	INS	ENSG00000223730	ENST00000431036	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.129:0.133	-	-	-	no_errors	RP1-127B20.4	Clone_based_vega_gene	ENSG00000223730	tier1			8	0	0.00	6	3	33.33
ENSG00000223759	0	genome.wustl.edu	37	1	149673393	149673393	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	149673393	149673393	C	T	SNP	ENSG00000223759	ENST00000443602	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-353N4.4	Clone_based_vega_gene	ENSG00000223759	tier1	-	-	27	0	0.00	23	4	14.81
ENSG00000225996	0	genome.wustl.edu	37	1	150523419	150523419	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	150523419	150523419	G	T	SNP	ENSG00000225996	ENST00000538795	human	ensembl	74_37	+1	known	missense	c.348	p.R116S	0.013	NULL	NULL	-	no_errors	AL356356.1	Clone_based_ensembl_gene	ENSG00000225996	tier1	-	-	28	0	0.00	20	6	23.08
ENSG00000226668	0	genome.wustl.edu	37	9	95646881	95646881	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	95646881	95646881	C	T	SNP	ENSG00000226668	ENST00000411450	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	RP11-526D8.7	Clone_based_vega_gene	ENSG00000226668	tier1	-	-	268	0	0.00	210	43	17.00
ENSG00000227066	0	genome.wustl.edu	37	1	20485496	20485497	+	RNA	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	20485496	20485497	-	C	INS	ENSG00000227066	ENST00000431027	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.299:0.301	-	-	-	no_errors	RP3-340N1.2	Clone_based_vega_gene	ENSG00000227066	tier1			9	0	0.00	1	3	75.00
ENSG00000228748	0	genome.wustl.edu	37	10	79551102	79551104	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	79551102	79551104	AAA	-	DEL	ENSG00000228748	ENST00000601701	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.981:0.979:0.925	-	-	-	no_errors	RP13-39P12.3	Clone_based_vega_gene	ENSG00000228748	tier1			59	0	0.00	44	4	8.33
ENSG00000229481	0	genome.wustl.edu	37	19	38321508	38321509	+	RNA	DEL	CT	CT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	38321508	38321509	CT	-	DEL	ENSG00000229481	ENST00000443870	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.918:0.863	-	-	-	no_errors	CTD-2554C21.3	Clone_based_vega_gene	ENSG00000229481	tier1			53	0	0.00	32	6	15.79
ENSG00000230534	0	genome.wustl.edu	37	10	35415940	35415940	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	35415940	35415940	G	A	SNP	ENSG00000230534	ENST00000457255	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-297A16.2	Clone_based_vega_gene	ENSG00000230534	tier1	-	-	27	0	0.00	16	7	30.43
ENSG00000231110	0	genome.wustl.edu	37	X	139298521	139298521	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	139298521	139298521	T	-	DEL	ENSG00000231110	ENST00000458577	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC004070.1	Clone_based_vega_gene	ENSG00000231110	tier1			102	0	0.00	69	12	14.81
ENSG00000231731	0	genome.wustl.edu	37	2	128263364	128263366	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	128263364	128263366	AAA	-	DEL	ENSG00000231731	ENST00000599001	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.233:0.319:0.309	-	-	-	no_errors	AC010976.2	Clone_based_vega_gene	ENSG00000231731	tier1			11	0	0.00	15	5	25.00
ENSG00000231909	0	genome.wustl.edu	37	9	19461158	19461158	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	19461158	19461158	C	T	SNP	ENSG00000231909	ENST00000438342	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-363E7.3	Clone_based_vega_gene	ENSG00000231909	tier1	-	-	39	0	0.00	37	9	19.57
ENSG00000232220	0	genome.wustl.edu	37	19	54379104	54379105	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	54379104	54379105	AA	-	DEL	ENSG00000232220	ENST00000413496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC008440.5	Clone_based_vega_gene	ENSG00000232220	tier1			18	0	0.00	19	3	13.64
ENSG00000233611	0	genome.wustl.edu	37	2	237186046	237186046	+	RNA	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	237186046	237186046	A	T	SNP	ENSG00000233611	ENST00000415226	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	AC079135.1	Clone_based_vega_gene	ENSG00000233611	tier1	-	-	74	0	0.00	66	13	16.46
ENSG00000234722	0	genome.wustl.edu	37	7	153110371	153110371	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	153110371	153110371	C	T	SNP	ENSG00000234722	ENST00000416982	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	AC073236.3	Clone_based_vega_gene	ENSG00000234722	tier1	-	-	13	0	0.00	10	10	50.00
ENSG00000235615	0	genome.wustl.edu	37	2	132724261	132724261	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	132724261	132724261	C	T	SNP	ENSG00000235615	ENST00000419362	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	AJ239322.1	Clone_based_vega_gene	ENSG00000235615	tier1	-	-	45	0	0.00	29	5	14.71
ENSG00000236498	0	genome.wustl.edu	37	2	62095872	62095872	+	RNA	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	62095872	62095872	C	A	SNP	ENSG00000236498	ENST00000425779	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC107081.5	Clone_based_vega_gene	ENSG00000236498	tier1	-	-	39	0	0.00	39	5	11.36
ENSG00000236817	0	genome.wustl.edu	37	1	247729143	247729143	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	247729143	247729143	T	-	DEL	ENSG00000236817	ENST00000435333	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-978I15.10	Clone_based_vega_gene	ENSG00000236817	tier1			36	0	0.00	31	7	18.42
ENSG00000236817	0	genome.wustl.edu	37	1	247729207	247729209	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	247729207	247729209	TTT	-	DEL	ENSG00000236817	ENST00000435333	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.001	-	-	-	no_errors	RP11-978I15.10	Clone_based_vega_gene	ENSG00000236817	tier1			25	0	0.00	26	9	25.71
ENSG00000237102	0	genome.wustl.edu	37	16	67244705	67244705	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	67244705	67244705	C	T	SNP	ENSG00000237102	ENST00000454102	human	ensembl	74_37	-1	known	missense	c.295	p.G99S	0.825	NULL	pfam_F-box_dom,superfamily_F-box_dom	-	no_errors	AC040160.1	Clone_based_ensembl_gene	ENSG00000237102	tier1	-	-	73	0	0.00	61	9	12.68
ENSG00000237281	0	genome.wustl.edu	37	2	219215890	219215890	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	219215890	219215890	T	-	DEL	ENSG00000237281	ENST00000411433	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.199	-	-	-	no_errors	AC021016.8	Clone_based_vega_gene	ENSG00000237281	tier1			51	0	0.00	45	9	16.67
ENSG00000238221	0	genome.wustl.edu	37	6	7298954	7298954	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	7298954	7298954	A	G	SNP	ENSG00000238221	ENST00000379928	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.126	-	-	-	no_errors	RP11-69L16.4	Clone_based_vega_gene	ENSG00000238221	tier1	-	-	28	0	0.00	9	9	50.00
ENSG00000239642	0	genome.wustl.edu	37	5	131214658	131214658	+	RNA	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	131214658	131214658	C	A	SNP	ENSG00000239642	ENST00000446743	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.825	-	-	-	no_errors	AC034228.7	Clone_based_vega_gene	ENSG00000239642	tier1	-	-	62	0	0.00	52	5	8.77
ENSG00000239642	0	genome.wustl.edu	37	5	131214681	131214682	+	RNA	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	131214681	131214682	-	T	INS	ENSG00000239642	ENST00000439905	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.868:0.807	-	-	-	no_errors	AC034228.7	Clone_based_vega_gene	ENSG00000239642	tier1			50	0	0.00	33	12	26.67
ENSG00000244151	0	genome.wustl.edu	37	7	150772273	150772273	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	150772273	150772273	C	T	SNP	ENSG00000244151	ENST00000485974	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.069	-	-	-	no_errors	RP11-148K1.12	Clone_based_vega_gene	ENSG00000244151	tier1	-	-	39	0	0.00	23	6	20.69
ENSG00000247049	0	genome.wustl.edu	37	5	180652113	180652113	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	180652113	180652113	T	C	SNP	ENSG00000247049	ENST00000499096	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CTC-338M12.7	Clone_based_vega_gene	ENSG00000247049	tier1	-	-	66	0	0.00	40	14	25.93
ENSG00000248544	0	genome.wustl.edu	37	5	156811601	156811601	+	RNA	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	156811601	156811601	C	-	DEL	ENSG00000248544	ENST00000508443	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTB-47B11.3	Clone_based_vega_gene	ENSG00000248544	tier1			59	0	0.00	44	8	15.38
ENSG00000251199	0	genome.wustl.edu	37	4	135248589	135248589	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	135248589	135248589	C	T	SNP	ENSG00000251199	ENST00000504728	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-400D2.2	Clone_based_vega_gene	ENSG00000251199	tier1	-	-	48	0	0.00	23	4	14.81
ENSG00000254420	0	genome.wustl.edu	37	11	78154811	78154813	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	78154811	78154813	AAA	-	DEL	ENSG00000254420	ENST00000534168	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.006:0.000	-	-	-	no_errors	RP11-452H21.1	Clone_based_vega_gene	ENSG00000254420	tier1			23	0	0.00	28	5	15.15
ENSG00000255622	0	genome.wustl.edu	37	5	140537224	140537224	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140537224	140537224	G	A	SNP	ENSG00000255622	ENST00000539533	human	ensembl	74_37	+1	known	missense	c.1648	p.V550M	0.932	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB17	Uniprot_gn	ENSG00000255622	tier1	-	-	234	0	0.00	211	24	10.21
ENSG00000257069	0	genome.wustl.edu	37	11	64060487	64060487	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	64060487	64060487	C	T	SNP	ENSG00000257069	ENST00000539086	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.983	-	-	-	no_errors	RP11-783K16.10	Clone_based_vega_gene	ENSG00000257069	tier1	-	-	93	0	0.00	61	16	20.51
ENSG00000257434	0	genome.wustl.edu	37	12	75435916	75435916	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	75435916	75435916	A	-	DEL	ENSG00000257434	ENST00000547040	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.025	-	-	-	no_errors	RP11-81K13.1	Clone_based_vega_gene	ENSG00000257434	tier1			12	0	0.00	14	3	17.65
ENSG00000257743	0	genome.wustl.edu	37	7	141899767	141899767	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	141899767	141899767	T	C	SNP	ENSG00000257743	ENST00000477922	human	ensembl	74_37	+1	putative	silent	c.5136	p.I1712	0.979	NULL	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,superfamily_P_trefoil,smart_P_trefoil	-	no_errors	RP11-1220K2.2	Clone_based_vega_gene	ENSG00000257743	tier1	-	-	117	0	0.00	80	10	11.11
ENSG00000257743	0	genome.wustl.edu	37	7	141920622	141920624	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	141920622	141920624	CTT	-	DEL	ENSG00000257743	ENST00000477922	human	ensembl	74_37	+1	putative	in_frame_del	c.6311_6313	p.S2105in_frame_del	0.003:0.001:0.000	NULL	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,superfamily_P_trefoil,smart_P_trefoil	-	no_errors	RP11-1220K2.2	Clone_based_vega_gene	ENSG00000257743	tier1			54	0	0.00	24	10	29.41
ENSG00000259455	0	genome.wustl.edu	37	15	23406344	23406344	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	23406344	23406344	C	T	SNP	ENSG00000259455	ENST00000558241	human	ensembl	74_37	-1	novel	missense	c.2492	p.R831Q	0.370	NULL	superfamily_Ribosomal_L7/12_C/ClpS-like,prints_Tropomyosin	-	no_errors	RP11-467N20.5	Clone_based_vega_gene	ENSG00000259455	tier1	-	-	49	0	0.00	42	6	12.50
ENSG00000260005	0	genome.wustl.edu	37	17	79204524	79204524	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	79204524	79204524	C	T	SNP	ENSG00000260005	ENST00000575922	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC027601.1	Clone_based_vega_gene	ENSG00000260005	tier1	-	-	86	0	0.00	66	11	14.29
ENSG00000260628	0	genome.wustl.edu	37	16	31993273	31993273	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	31993273	31993273	G	A	SNP	ENSG00000260628	ENST00000568570	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-1166P10.1	Clone_based_vega_gene	ENSG00000260628	tier1	-	-	93	0	0.00	49	10	16.95
ENSG00000261238	0	genome.wustl.edu	37	16	51183171	51183171	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	51183171	51183171	T	-	DEL	ENSG00000261238	ENST00000570060	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	AC009166.5	Clone_based_vega_gene	ENSG00000261238	tier1			17	0	0.00	14	13	48.15
ENSG00000261759	0	genome.wustl.edu	37	16	19132370	19132371	+	RNA	DEL	TT	TT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	19132370	19132371	TT	-	DEL	ENSG00000261759	ENST00000567236	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.985:0.987	-	-	-	no_errors	RP11-626G11.3	Clone_based_vega_gene	ENSG00000261759	tier1			45	0	0.00	43	7	14.00
ENSG00000261770	0	genome.wustl.edu	37	19	28248495	28248495	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	28248495	28248495	A	-	DEL	ENSG00000261770	ENST00000562493	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.809	-	-	-	no_errors	CTC-459F4.1	Clone_based_vega_gene	ENSG00000261770	tier1			20	0	0.00	17	4	19.05
ENSG00000261863	0	genome.wustl.edu	37	17	4514128	4514128	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	4514128	4514128	G	T	SNP	ENSG00000261863	ENST00000573270	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-141J13.5	Clone_based_vega_gene	ENSG00000261863	tier1	-	-	36	0	0.00	28	7	20.00
ENSG00000263272	0	genome.wustl.edu	37	17	5334805	5334806	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	5334805	5334806	AA	-	DEL	ENSG00000263272	ENST00000575890	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.002	-	-	-	no_errors	CTC-524C5.2	Clone_based_vega_gene	ENSG00000263272	tier1			21	0	0.00	12	3	20.00
ENSG00000265015	0	genome.wustl.edu	37	18	15197707	15197707	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	15197707	15197707	G	A	SNP	ENSG00000265015	ENST00000581666	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RP11-454P7.3	Clone_based_vega_gene	ENSG00000265015	tier1	-	-	22	0	0.00	18	7	28.00
ENSG00000265194	0	genome.wustl.edu	37	9	21861903	21861904	+	RNA	DEL	TT	TT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	21861903	21861904	TT	-	DEL	ENSG00000265194	ENST00000581788	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-70L8.4	Clone_based_vega_gene	ENSG00000265194	tier1			21	0	0.00	24	7	22.58
ENSG00000266002	0	genome.wustl.edu	37	17	57477848	57477849	+	RNA	DEL	TT	TT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	57477848	57477849	TT	-	DEL	ENSG00000266002	ENST00000585190	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.648:0.971	-	-	-	no_errors	RP11-567L7.5	Clone_based_vega_gene	ENSG00000266002	tier1			73	0	0.00	75	14	15.73
ENSG00000266156	0	genome.wustl.edu	37	19	20988370	20988370	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	20988370	20988370	T	-	DEL	ENSG00000266156	ENST00000582722	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	AC010329.1	Clone_based_ensembl_gene	ENSG00000266156	tier1			27	0	0.00	11	9	45.00
ENSG00000266560	0	genome.wustl.edu	37	X	151283730	151283730	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	151283730	151283730	G	A	SNP	ENSG00000266560	ENST00000509345	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-1007I13.4	Clone_based_vega_gene	ENSG00000266560	tier1	-	-	77	0	0.00	43	9	17.31
ENSG00000267075	0	genome.wustl.edu	37	17	20452595	20452595	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	20452595	20452595	C	T	SNP	ENSG00000267075	ENST00000591705	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.081	-	-	-	no_errors	RP11-434D2.3	Clone_based_vega_gene	ENSG00000267075	tier1	-	-	46	0	0.00	33	6	15.38
ENSG00000267270	0	genome.wustl.edu	37	18	77927006	77927006	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	77927006	77927006	C	T	SNP	ENSG00000267270	ENST00000587254	human	ensembl	74_37	+1	putative	missense	c.290	p.A97V	0.000	NULL	NULL	-	no_errors	AC139100.2	Clone_based_vega_gene	ENSG00000267270				42	0	0.00	31	3	8.57
ENSG00000267349	0	genome.wustl.edu	37	17	33805073	33805073	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	33805073	33805073	C	T	SNP	ENSG00000267349	ENST00000587076	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-686D22.9	Clone_based_vega_gene	ENSG00000267349	tier1	-	-	58	0	0.00	36	12	25.00
ENSG00000267427	0	genome.wustl.edu	37	19	6211915	6211915	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	6211915	6211915	G	A	SNP	ENSG00000267427	ENST00000586154	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CTC-503J8.6	Clone_based_vega_gene	ENSG00000267427				26	0	0.00	13	6	31.58
ENSG00000267668	0	genome.wustl.edu	37	17	36003288	36003288	+	RNA	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	36003288	36003288	C	-	DEL	ENSG00000267668	ENST00000586163	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	RP11-697E22.2	Clone_based_vega_gene	ENSG00000267668	tier1			115	0	0.00	73	11	13.10
ENSG00000267980	0	genome.wustl.edu	37	19	4363922	4363922	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	4363922	4363922	C	T	SNP	ENSG00000267980	ENST00000594444	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC007292.6	Clone_based_vega_gene	ENSG00000267980	tier1	-	-	31	0	0.00	37	7	15.91
ENSG00000268467	0	genome.wustl.edu	37	11	107462517	107462517	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	107462517	107462517	C	T	SNP	ENSG00000268467	ENST00000600612	human	ensembl	74_37	+1	known	nonsense	c.34	p.R12*	0.001	NULL	NULL	-	no_errors	AP000889.3	Clone_based_ensembl_gene	ENSG00000268467	tier1	-	-	93	0	0.00	67	9	11.84
ENSG00000268802	0	genome.wustl.edu	37	19	54864064	54864064	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	54864064	54864064	C	T	SNP	ENSG00000268802	ENST00000596234	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2587H19.1	Clone_based_vega_gene	ENSG00000268802	tier1	-	-	70	0	0.00	38	4	9.52
ENSG00000269318	0	genome.wustl.edu	37	19	4357451	4357452	+	RNA	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	4357451	4357452	-	G	INS	ENSG00000269318	ENST00000593524	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002:0.000	-	-	-	no_errors	AC007292.3	Clone_based_vega_gene	ENSG00000269318	tier1			96	0	0.00	73	9	10.98
ENSG00000271894	0	genome.wustl.edu	37	2	56612188	56612188	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	56612188	56612188	T	-	DEL	ENSG00000271894	ENST00000607540	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-482H16.1	Clone_based_vega_gene	ENSG00000271894	tier1			59	0	0.00	47	6	11.32
ENSG00000272054	0	genome.wustl.edu	37	2	37438027	37438027	+	RNA	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	37438027	37438027	C	-	DEL	ENSG00000272054	ENST00000606229	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-423P10.2	Clone_based_vega_gene	ENSG00000272054	tier1			41	0	0.00	34	10	22.73
ENSG00000272299	0	genome.wustl.edu	37	13	64412096	64412096	+	RNA	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	64412096	64412096	C	0	DEL	ENSG00000272299	ENST00000606894	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.188	-	-	-	no_errors	RP11-394A14.4	Clone_based_vega_gene	ENSG00000272299				9	0	0.00	9	4	30.77
ENSG00000272750	0	genome.wustl.edu	37	1	222833383	222833383	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	222833383	222833383	T	-	DEL	ENSG00000272750	ENST00000608771	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-378J18.8	Clone_based_vega_gene	ENSG00000272750	tier1			12	0	0.00	20	5	20.00
ENSG00000272913	0	genome.wustl.edu	37	2	96191107	96191107	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	96191107	96191107	C	T	SNP	ENSG00000272913	ENST00000609975	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.806	-	-	-	no_errors	RP11-440D17.3	Clone_based_vega_gene	ENSG00000272913	tier1	-	-	33	0	0.00	19	9	32.14
ENSG00000273389	0	genome.wustl.edu	37	4	86921610	86921610	+	RNA	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	86921610	86921610	C	-	DEL	ENSG00000273389	ENST00000610225	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP13-514E23.2	Clone_based_vega_gene	ENSG00000273389	tier1			108	0	0.00	113	22	16.30
ENSG00000273455	0	genome.wustl.edu	37	3	135806703	135806704	+	RNA	DEL	TT	TT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	135806703	135806704	TT	-	DEL	ENSG00000273455	ENST00000608883	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004:0.002	-	-	-	no_errors	RP11-305O4.3	Clone_based_vega_gene	ENSG00000273455	tier1			63	0	0.00	46	19	29.23
ENTPD7	0	genome.wustl.edu	37	10	101458440	101458440	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	101458440	101458440	G	A	SNP	ENTPD7	ENST00000370489	human	ensembl	74_37	+1	known	missense	c.1160	p.S387N	0.998	pfam_GDA1_CD39_NTPase	pfam_GDA1_CD39_NTPase	-	no_errors	ENTPD7	HGNC	ENSG00000198018	tier1	-	-	60	0	0.00	34	11	24.44
EP300	0	genome.wustl.edu	37	22	41513396	41513396	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	41513396	41513396	A	G	SNP	EP300	ENST00000263253	human	ensembl	74_37	+1	known	silent	c.300	p.P100	0.995	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	EP300	HGNC	ENSG00000100393	tier1	-	-	61	0	0.00	35	9	20.45
EP400	0	genome.wustl.edu	37	12	132497561	132497561	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	132497561	132497561	C	G	SNP	EP400	ENST00000333577	human	ensembl	74_37	+1	known	missense	c.3557	p.A1186G	0.030	pfam_SNF2_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Myb-like_dom,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	EP400	HGNC	ENSG00000183495	tier1	-	-	48	0	0.00	52	6	10.34
EPAS1	0	genome.wustl.edu	37	2	46608780	46608780	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	46608780	46608780	G	A	SNP	EPAS1	ENST00000263734	human	ensembl	74_37	+1	known	silent	c.2091	p.P697	0.090	NULL	pfam_PAS_fold_3,pfam_HIF-1_TAD_C,pfam_HIF_alpha_subunit,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_Nuc_translocat,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	EPAS1	HGNC	ENSG00000116016	tier1	-	-	48	0	0.00	50	9	15.25
EPB41	0	genome.wustl.edu	37	1	29445784	29445784	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	29445784	29445784	T	-	DEL	EPB41	ENST00000460378	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.590	-	-	-	no_errors	EPB41	HGNC	ENSG00000159023	tier1			61	0	0.00	44	19	30.16
EPB41L3	0	genome.wustl.edu	37	18	5406823	5406823	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	5406823	5406823	C	T	SNP	EPB41L3	ENST00000341928	human	ensembl	74_37	-1	known	missense	c.2302	p.A768T	0.889	pirsf_Band_41_protein	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L3	HGNC	ENSG00000082397	tier1	-	-	89	0	0.00	57	8	12.31
EPB41L3	0	genome.wustl.edu	37	18	5406836	5406836	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	5406836	5406836	G	-	DEL	EPB41L3	ENST00000341928	human	ensembl	74_37	-1	known	frame_shift_del	c.2289	p.V764fs	0.000	pirsf_Band_41_protein,pfam_SAB_dom	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L3	HGNC	ENSG00000082397	tier1			96	0	0.00	61	11	15.28
EPG5	0	genome.wustl.edu	37	18	43470004	43470005	+	RNA	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	43470004	43470005	-	A	INS	EPG5	ENST00000587973	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.004	-	-	-	no_errors	EPG5	HGNC	ENSG00000152223	tier1			16	0	0.00	11	4	26.67
EPHA10	0	genome.wustl.edu	37	1	38227207	38227207	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	38227207	38227207	G	A	SNP	EPHA10	ENST00000427468	human	ensembl	74_37	-1	known	silent	c.720	p.C240	1.000	pirsf_Tyr_kinase_ephrin_rcpt,superfamily_Growth_fac_rcpt_N_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_SAM/pointed,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA10	HGNC	ENSG00000183317				13	0	0.00	11	3	21.43
EPHA2	0	genome.wustl.edu	37	1	16462258	16462258	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	16462258	16462258	G	-	DEL	EPHA2	ENST00000358432	human	ensembl	74_37	-1	known	frame_shift_del	c.1320	p.K441fs	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA2	HGNC	ENSG00000142627	tier1			75	0	0.00	48	6	11.11
EPHA4	0	genome.wustl.edu	37	2	222294769	222294769	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	222294769	222294769	C	T	SNP	EPHA4	ENST00000281821	human	ensembl	74_37	-1	known	missense	c.2599	p.D867N	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA4	HGNC	ENSG00000116106	tier1	-	-	48	0	0.00	45	5	9.80
EPHA7	0	genome.wustl.edu	37	6	93964433	93964433	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	93964433	93964433	A	G	SNP	EPHA7	ENST00000369303	human	ensembl	74_37	-1	known	missense	c.2464	p.Y822H	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA7	HGNC	ENSG00000135333				65	0	0.00	45	3	6.25
EPHA8	0	genome.wustl.edu	37	1	22915633	22915633	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	22915633	22915633	G	A	SNP	EPHA8	ENST00000166244	human	ensembl	74_37	+1	known	missense	c.1249	p.G417S	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA8	HGNC	ENSG00000070886	tier1	-	-	76	0	0.00	56	10	15.15
EPHB1	0	genome.wustl.edu	37	3	134670233	134670233	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	134670233	134670233	C	T	SNP	EPHB1	ENST00000398015	human	ensembl	74_37	+1	known	silent	c.144	p.Y48	0.172	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB1	HGNC	ENSG00000154928	tier1	-	-	64	0	0.00	34	13	27.66
EPHB1	0	genome.wustl.edu	37	3	134670376	134670376	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	134670376	134670376	G	A	SNP	EPHB1	ENST00000398015	human	ensembl	74_37	+1	known	missense	c.287	p.C96Y	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB1	HGNC	ENSG00000154928	tier1	-	-	51	0	0.00	38	9	19.15
EPHB2	0	genome.wustl.edu	37	1	23240246	23240246	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	23240246	23240246	A	-	DEL	EPHB2	ENST00000400191	human	ensembl	74_37	+1	known	frame_shift_del	c.3051	p.K1020fs	0.270	NULL	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHB2	HGNC	ENSG00000133216	tier1			74	0	0.00	62	19	23.46
EPHX1	0	genome.wustl.edu	37	1	226026384	226026384	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	226026384	226026384	C	-	DEL	EPHX1	ENST00000272167	human	ensembl	74_37	+1	known	frame_shift_del	c.394	p.Q134fs	1.000	pfam_Epoxide_hydro_N,pirsf_Epoxide_hydrolase	pfam_Epoxide_hydro_N,pfam_AB_hydrolase_1,pirsf_Epoxide_hydrolase,prints_Epox_hydrolase-like	-	no_errors	EPHX1	HGNC	ENSG00000143819	tier1			16	0	0.00	22	8	26.67
EPPK1	0	genome.wustl.edu	37	8	144944886	144944886	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	144944886	144944886	G	A	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	missense	c.2536	p.R846C	0.000	NULL	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184	tier1	-	-	23	0	0.00	21	4	16.00
EPS8L2	0	genome.wustl.edu	37	11	726965	726965	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	726965	726965	G	-	DEL	EPS8L2	ENST00000318562	human	ensembl	74_37	+1	known	frame_shift_del	c.2132	p.E713fs	0.028	NULL	pfam_PTB,pfam_SH3_domain,pfam_PTB/PI_dom,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_PTB/PI_dom,smart_SH3_domain,pfscan_PTB/PI_dom,pfscan_SH3_domain	-	no_errors	EPS8L2	HGNC	ENSG00000177106	tier1			43	0	0.00	35	8	18.60
ERAS	0	genome.wustl.edu	37	X	48687785	48687785	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	48687785	48687785	G	A	SNP	ERAS	ENST00000338270	human	ensembl	74_37	+1	known	silent	c.252	p.L84	0.003	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	ERAS	HGNC	ENSG00000187682	tier1	-	-	54	0	0.00	28	6	17.65
ERBB2	0	genome.wustl.edu	37	17	37881000	37881000	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	37881000	37881000	G	A	SNP	ERBB2	ENST00000269571	human	ensembl	74_37	+1	known	missense	c.2329	p.V777M	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB2	HGNC	ENSG00000141736	tier1	-	-	72	0	0.00	46	18	28.12
ERBB4	0	genome.wustl.edu	37	2	213403245	213403245	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	213403245	213403245	C	T	SNP	ERBB4	ENST00000342788	human	ensembl	74_37	-1	known	missense	c.10	p.A4T	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB4	HGNC	ENSG00000178568	tier1	-	-	170	0	0.00	117	15	11.36
ERF	0	genome.wustl.edu	37	19	42753368	42753368	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	42753368	42753368	C	-	DEL	ERF	ENST00000222329	human	ensembl	74_37	-1	known	frame_shift_del	c.896	p.G299fs	0.941	NULL	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ERF	HGNC	ENSG00000105722	tier1			44	0	0.00	43	13	23.21
ERN2	0	genome.wustl.edu	37	16	23702270	23702270	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	23702270	23702270	C	T	SNP	ERN2	ENST00000256797	human	ensembl	74_37	-1	known	missense	c.2807	p.R936Q	0.004	pfam_KEN_dom,smart_PUG-dom	pfam_KEN_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like_supfam,smart_PQQ_beta_propeller_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PUG-dom,pfscan_Prot_kinase_dom	-	no_errors	ERN2	HGNC	ENSG00000134398				37	0	0.00	22	2	8.33
ERVMER34-1	0	genome.wustl.edu	37	4	53610789	53610789	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	53610789	53610789	A	-	DEL	ERVMER34-1	ENST00000440542	human	ensembl	74_37	-1	known	frame_shift_del	c.899	p.L300fs	0.001	NULL	pfam_TLV/ENV_coat_polyprotein	-	no_errors	ERVMER34-1	HGNC	ENSG00000226887	tier1			68	0	0.00	33	6	15.38
ESPN	0	genome.wustl.edu	37	1	6504567	6504567	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	6504567	6504567	G	A	SNP	ESPN	ENST00000377828	human	ensembl	74_37	+1	known	silent	c.1017	p.R339	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_WH2_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_WH2_dom	-	no_errors	ESPN	HGNC	ENSG00000187017	tier1	-	-	40	0	0.00	38	8	17.39
ESR2	0	genome.wustl.edu	37	14	64723982	64723982	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	64723982	64723982	G	A	SNP	ESR2	ENST00000341099	human	ensembl	74_37	-1	known	silent	c.1053	p.P351	0.018	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Estrogen_rcpt_beta_N,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	ESR2	HGNC	ENSG00000140009	tier1	-	-	58	0	0.00	30	13	30.23
ESRP1	0	genome.wustl.edu	37	8	95686611	95686611	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	95686611	95686611	A	-	DEL	ESRP1	ENST00000433389	human	ensembl	74_37	+1	known	frame_shift_del	c.1528	p.N512fs	1.000	smart_RRM_dom	superfamily_RNaseH-like_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	ESRP1	HGNC	ENSG00000104413	tier1			59	0	0.00	67	8	10.67
ETS1	0	genome.wustl.edu	37	11	128359270	128359270	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	128359270	128359270	G	A	SNP	ETS1	ENST00000392668	human	ensembl	74_37	-1	known	silent	c.450	p.C150	0.940	pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,pirsf_Transform_prot_C-ets	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pirsf_Transform_prot_C-ets,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ETS1	HGNC	ENSG00000134954	tier1	-	-	63	0	0.00	58	21	26.58
EVC	0	genome.wustl.edu	37	4	5809991	5809991	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	5809991	5809991	C	T	SNP	EVC	ENST00000264956	human	ensembl	74_37	+1	known	silent	c.2625	p.H875	0.000	NULL	NULL	-	no_errors	EVC	HGNC	ENSG00000072840	tier1	-	-	49	0	0.00	20	7	25.93
EVC2	0	genome.wustl.edu	37	4	5624385	5624385	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	5624385	5624385	C	-	DEL	EVC2	ENST00000344408	human	ensembl	74_37	-1	known	frame_shift_del	c.2380	p.E794fs	0.994	NULL	pfam_Limbin	-	no_errors	EVC2	HGNC	ENSG00000173040	tier1			35	0	0.00	27	8	22.86
EVI5	0	genome.wustl.edu	37	1	93159366	93159366	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	93159366	93159366	T	-	DEL	EVI5	ENST00000543509	human	ensembl	74_37	-1	known	frame_shift_del	c.1222	p.M408fs	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	EVI5	HGNC	ENSG00000067208	tier1			38	0	0.00	46	14	23.33
EVI5L	0	genome.wustl.edu	37	19	7920932	7920932	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	7920932	7920932	A	G	SNP	EVI5L	ENST00000538904	human	ensembl	74_37	+1	known	missense	c.1178	p.Q393R	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	EVI5L	HGNC	ENSG00000142459	tier1	-	-	124	0	0.00	80	21	20.79
EVI5L	0	genome.wustl.edu	37	19	7911536	7911536	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	7911536	7911536	G	T	SNP	EVI5L	ENST00000538904	human	ensembl	74_37	+1	known	missense	c.108	p.E36D	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	EVI5L	HGNC	ENSG00000142459				72	0	0.00	60	4	6.25
EVPL	0	genome.wustl.edu	37	17	74019420	74019420	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	74019420	74019420	C	T	SNP	EVPL	ENST00000301607	human	ensembl	74_37	-1	known	missense	c.433	p.D145N	0.023	NULL	pfam_Plectin_repeat,superfamily_Ferritin-like_SF,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	EVPL	HGNC	ENSG00000167880				75	0	0.00	61	6	8.82
EXOSC9	0	genome.wustl.edu	37	4	122723894	122723894	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	122723894	122723894	T	-	DEL	EXOSC9	ENST00000379663	human	ensembl	74_37	+1	known	frame_shift_del	c.227	p.F78fs	1.000	pfam_ExoRNase_PH_dom1,superfamily_Ribosomal_S5_D2-typ_fold	pfam_ExoRNase_PH_dom1,pfam_ExoRNase_PH_dom2,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_ExoRNase_PH_dom2	-	no_errors	EXOSC9	HGNC	ENSG00000123737	tier1			74	0	0.00	44	9	16.98
EXPH5	0	genome.wustl.edu	37	11	108384340	108384340	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	108384340	108384340	A	-	DEL	EXPH5	ENST00000265843	human	ensembl	74_37	-1	known	frame_shift_del	c.1894	p.S632fs	0.049	NULL	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	-	no_errors	EXPH5	HGNC	ENSG00000110723	tier1			42	0	0.00	47	7	12.96
EYA2	0	genome.wustl.edu	37	20	45771768	45771768	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	45771768	45771768	T	C	SNP	EYA2	ENST00000327619	human	ensembl	74_37	+1	known	missense	c.959	p.L320P	1.000	pfam_HAD-like_dom,tigrfam_EYA	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_EYA	-	no_errors	EYA2	HGNC	ENSG00000064655				33	0	0.00	24	2	7.69
EYS	0	genome.wustl.edu	37	6	64430615	64430615	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	64430615	64430615	A	G	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	silent	c.9375	p.F3125	0.957	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	tier1	-	-	85	0	0.00	41	18	30.51
EYS	0	genome.wustl.edu	37	6	65336092	65336092	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	65336092	65336092	C	T	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	missense	c.3490	p.E1164K	0.955	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	tier1	-	-	46	0	0.00	38	7	15.56
EYS	0	genome.wustl.edu	37	6	65622633	65622633	+	Nonsense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	65622633	65622633	A	T	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	nonsense	c.2385	p.C795*	0.969	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	tier1	-	-	29	0	0.00	24	3	11.11
F11R	0	genome.wustl.edu	37	1	160970945	160970945	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	160970945	160970945	G	T	SNP	F11R	ENST00000472573	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	F11R	HGNC	ENSG00000158769	tier1	-	-	32	0	0.00	36	5	12.20
F13B	0	genome.wustl.edu	37	1	197021828	197021828	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	197021828	197021828	T	C	SNP	F13B	ENST00000367412	human	ensembl	74_37	-1	known	silent	c.1491	p.P497	0.000	superfamily_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	F13B	HGNC	ENSG00000143278	tier1	-	-	66	0	0.00	38	6	13.64
F13B	0	genome.wustl.edu	37	1	197032137	197032137	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	197032137	197032137	A	G	SNP	F13B	ENST00000367412	human	ensembl	74_37	-1	known	missense	c.115	p.Y39H	1.000	superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	F13B	HGNC	ENSG00000143278				29	0	0.00	17	4	19.05
F2	0	genome.wustl.edu	37	11	46751031	46751031	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	46751031	46751031	T	C	SNP	F2	ENST00000311907	human	ensembl	74_37	+1	known	missense	c.1574	p.V525A	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pirsf_Prothrombin/thrombin,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Kringle,pfam_Thrombin_light_chain,pfam_GLA_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,superfamily_GLA_domain,smart_GLA_domain,smart_Kringle,smart_Peptidase_S1,pirsf_Prothrombin/thrombin,pfscan_GLA_domain,pfscan_Kringle,pfscan_Peptidase_S1,prints_Prothrombin/thrombin,prints_Peptidase_S1A,prints_GLA_domain	-	no_errors	F2	HGNC	ENSG00000180210	tier1	-	-	53	0	0.00	29	21	42.00
FA2H	0	genome.wustl.edu	37	16	74752984	74752984	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	74752984	74752984	C	T	SNP	FA2H	ENST00000219368	human	ensembl	74_37	-1	known	missense	c.688	p.E230K	0.999	pfam_Fatty_acid_hydroxylase,pirsf_Ino-phos-ceramide-B_Hydrxlase	pfam_Fatty_acid_hydroxylase,pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pirsf_Ino-phos-ceramide-B_Hydrxlase,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Cyt_B5-like_heme/steroid-bd	-	no_errors	FA2H	HGNC	ENSG00000103089	tier1	-	-	55	0	0.00	32	6	15.79
FAHD2B	0	genome.wustl.edu	37	2	97749725	97749725	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	97749725	97749725	G	-	DEL	FAHD2B	ENST00000272610	human	ensembl	74_37	-1	known	frame_shift_del	c.842	p.P281fs	1.000	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel	pfam_Fumarylacetoacetase_C,superfamily_Fumarylacetoacetase_C-rel	-	no_errors	FAHD2B	HGNC	ENSG00000144199	tier1			72	0	0.00	32	13	28.89
FAM109B	0	genome.wustl.edu	37	22	42473377	42473377	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	42473377	42473377	G	-	DEL	FAM109B	ENST00000321753	human	ensembl	74_37	+1	known	frame_shift_del	c.80	p.G29fs	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	FAM109B	HGNC	ENSG00000177096	tier1			73	0	0.00	48	10	17.24
FAM117A	0	genome.wustl.edu	37	17	47788822	47788822	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	47788822	47788822	A	G	SNP	FAM117A	ENST00000240364	human	ensembl	74_37	-1	known	missense	c.1157	p.L386P	1.000	NULL	NULL	-	no_errors	FAM117A	HGNC	ENSG00000121104	tier1	-	-	84	0	0.00	52	14	21.21
FAM117A	0	genome.wustl.edu	37	17	47797720	47797720	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	47797720	47797720	G	T	SNP	FAM117A	ENST00000240364	human	ensembl	74_37	-1	known	missense	c.541	p.L181I	0.988	NULL	NULL	-	no_errors	FAM117A	HGNC	ENSG00000121104	tier1	-	-	40	0	0.00	37	11	22.92
FAM129B	0	genome.wustl.edu	37	9	130269287	130269287	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	130269287	130269287	G	A	SNP	FAM129B	ENST00000373312	human	ensembl	74_37	-1	known	missense	c.2078	p.P693L	0.034	NULL	pfscan_Pleckstrin_homology	-	no_errors	FAM129B	HGNC	ENSG00000136830	tier1	-	-	21	0	0.00	18	3	14.29
FAM135B	0	genome.wustl.edu	37	8	139209858	139209858	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	139209858	139209858	G	A	SNP	FAM135B	ENST00000395297	human	ensembl	74_37	-1	known	nonsense	c.724	p.R242*	1.000	NULL	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like	-	no_errors	FAM135B	HGNC	ENSG00000147724	tier1	-	-	41	0	0.00	21	12	36.36
FAM160A2	0	genome.wustl.edu	37	11	6245433	6245433	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	6245433	6245433	C	A	SNP	FAM160A2	ENST00000265978	human	ensembl	74_37	-1	known	missense	c.184	p.G62C	1.000	NULL	pfam_RetinoicA-induced_16-like	-	no_errors	FAM160A2	HGNC	ENSG00000051009	tier1	-	-	39	0	0.00	22	8	26.67
FAM160B1	0	genome.wustl.edu	37	10	116621264	116621264	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	116621264	116621264	G	A	SNP	FAM160B1	ENST00000369248	human	ensembl	74_37	+1	known	missense	c.2263	p.A755T	1.000	NULL	pfam_RetinoicA-induced_16-like	-	no_errors	FAM160B1	HGNC	ENSG00000151553				41	0	0.00	34	3	8.11
FAM166B	0	genome.wustl.edu	37	9	35563286	35563286	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	35563286	35563286	G	T	SNP	FAM166B	ENST00000447837	human	ensembl	74_37	-1	known	missense	c.163	p.P55T	1.000	pfam_UPF0573/UPF0605	pfam_UPF0573/UPF0605	-	no_errors	FAM166B	HGNC	ENSG00000215187				42	0	0.00	49	4	7.55
FAM172A	0	genome.wustl.edu	37	5	93217282	93217282	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	93217282	93217282	C	T	SNP	FAM172A	ENST00000395965	human	ensembl	74_37	-1	known	missense	c.680	p.R227Q	1.000	NULL	pfam_Arb2_domain	-	no_errors	FAM172A	HGNC	ENSG00000113391	tier1	-	-	63	0	0.00	29	6	17.14
FAM179A	0	genome.wustl.edu	37	2	29240775	29240775	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	29240775	29240775	G	T	SNP	FAM179A	ENST00000379558	human	ensembl	74_37	+1	known	missense	c.1313	p.S438I	1.000	NULL	pfam_CLASP_N_dom,superfamily_ARM-type_fold	-	no_errors	FAM179A	HGNC	ENSG00000189350	tier1	-	-	34	0	0.00	25	5	16.67
FAM182B	0	genome.wustl.edu	37	20	25847712	25847712	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	25847712	25847712	T	C	SNP	FAM182B	ENST00000424021	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	FAM182B	HGNC	ENSG00000175170	tier1	-	-	26	0	0.00	10	7	41.18
FAM193A	0	genome.wustl.edu	37	4	2695555	2695555	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	2695555	2695555	C	-	DEL	FAM193A	ENST00000324666	human	ensembl	74_37	+1	known	frame_shift_del	c.2173	p.P726fs	0.084	NULL	NULL	-	no_errors	FAM193A	HGNC	ENSG00000125386	tier1			50	0	0.00	29	8	21.62
FAM20C	0	genome.wustl.edu	37	7	208908	208908	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	208908	208908	G	-	DEL	FAM20C	ENST00000313766	human	ensembl	74_37	+1	known	frame_shift_del	c.795	p.G267fs	0.007	NULL	pfam_DUF1193	-	no_errors	FAM20C	HGNC	ENSG00000177706	tier1			54	0	0.00	32	7	17.95
FAM214B	0	genome.wustl.edu	37	9	35106613	35106613	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	35106613	35106613	C	T	SNP	FAM214B	ENST00000322813	human	ensembl	74_37	-1	known	silent	c.981	p.G327	0.463	NULL	NULL	-	no_errors	FAM214B	HGNC	ENSG00000005238	tier1	-	-	89	0	0.00	66	11	14.29
FAM214B	0	genome.wustl.edu	37	9	35107838	35107838	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	35107838	35107838	C	T	SNP	FAM214B	ENST00000322813	human	ensembl	74_37	-1	known	missense	c.434	p.C145Y	0.019	NULL	NULL	-	no_errors	FAM214B	HGNC	ENSG00000005238	tier1	-	-	82	0	0.00	58	7	10.77
FAM218A	0	genome.wustl.edu	37	4	165878577	165878578	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	165878577	165878578	-	T	INS	FAM218A	ENST00000513876	human	ensembl	74_37	+1	known	frame_shift_ins	c.403_404	p.V137fs	0.000:0.000	NULL	NULL	-	no_errors	FAM218A	HGNC	ENSG00000250486	tier1			43	0	0.00	27	4	12.90
FAM43B	0	genome.wustl.edu	37	1	20879658	20879658	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	20879658	20879658	G	A	SNP	FAM43B	ENST00000332947	human	ensembl	74_37	+1	known	silent	c.192	p.E64	1.000	NULL	smart_PTB/PI_dom	-	no_errors	FAM43B	HGNC	ENSG00000183114	tier1	-	-	64	0	0.00	46	4	8.00
FAM45A	0	genome.wustl.edu	37	10	120896691	120896691	+	RNA	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	120896691	120896691	A	T	SNP	FAM45A	ENST00000489988	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.914	-	-	-	no_errors	FAM45A	HGNC	ENSG00000119979	tier1	-	-	89	0	0.00	45	19	29.23
FAM53B	0	genome.wustl.edu	37	10	126370628	126370628	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	126370628	126370628	C	T	SNP	FAM53B	ENST00000337318	human	ensembl	74_37	-1	known	missense	c.454	p.V152I	1.000	NULL	NULL	-	no_errors	FAM53B	HGNC	ENSG00000189319	tier1	-	-	32	0	0.00	28	5	15.15
FAM53C	0	genome.wustl.edu	37	5	137673882	137673882	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	137673882	137673882	C	T	SNP	FAM53C	ENST00000505768	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM53C	HGNC	ENSG00000120709	tier1	-	-	67	0	0.00	53	11	17.19
FAM71A	0	genome.wustl.edu	37	1	212799737	212799737	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	212799737	212799737	C	T	SNP	FAM71A	ENST00000294829	human	ensembl	74_37	+1	known	silent	c.1518	p.H506	0.362	NULL	pfam_DUF3699	-	no_errors	FAM71A	HGNC	ENSG00000162771	tier1	-	-	45	0	0.00	40	4	9.09
FAM83F	0	genome.wustl.edu	37	22	40417669	40417670	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	40417669	40417670	-	C	INS	FAM83F	ENST00000333407	human	ensembl	74_37	+1	known	frame_shift_ins	c.1155_1156	p.V387fs	0.968:1.000	NULL	pfam_DUF1669	-	no_errors	FAM83F	HGNC	ENSG00000133477	tier1			84	0	0.00	57	22	27.85
FAM83H	0	genome.wustl.edu	37	8	144809053	144809053	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	144809053	144809053	G	A	SNP	FAM83H	ENST00000388913	human	ensembl	74_37	-1	known	missense	c.2578	p.H860Y	0.015	NULL	pfam_DUF1669	-	no_errors	FAM83H	HGNC	ENSG00000180921	tier1	-	-	60	0	0.00	72	7	8.86
FAM90A1	0	genome.wustl.edu	37	12	8374830	8374830	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	8374830	8374830	G	0	DEL	FAM90A1	ENST00000307435	human	ensembl	74_37	-1	known	frame_shift_del	c.983	p.P328fs	0.001	NULL	NULL	-	no_errors	FAM90A1	HGNC	ENSG00000171847				197	0	0.00	176	18	9.28
FANCM	0	genome.wustl.edu	37	14	45644288	45644288	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	45644288	45644288	T	C	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	silent	c.2331	p.Y777	1.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790	tier1	-	-	38	0	0.00	29	10	25.64
FARSB	0	genome.wustl.edu	37	2	223507641	223507641	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	223507641	223507641	G	A	SNP	FARSB	ENST00000281828	human	ensembl	74_37	-1	known	silent	c.198	p.D66	0.041	superfamily_DNA-bd_dom_put,tigrfam_Phe-tRNA-synth_IIc_bsu_arc	pfam_B3/B4_tRNA-bd,pfam_tRNA_synthase_B5-dom,superfamily_DNA-bd_dom_put,superfamily_Phe-tRNA_synthase_B3/B4,smart_B3/B4_tRNA-bd,smart_tRNA_synthase_B5-dom,tigrfam_Phe-tRNA-synth_IIc_bsu_arc	-	no_errors	FARSB	HGNC	ENSG00000116120	tier1	rs201304892	-	78	0	0.00	58	18	23.68
FAT2	0	genome.wustl.edu	37	5	150923671	150923671	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	150923671	150923671	A	G	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	silent	c.7017	p.Y2339	0.998	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	tier1	-	-	46	0	0.00	38	7	15.56
FAT2	0	genome.wustl.edu	37	5	150885626	150885626	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	150885626	150885626	T	C	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	missense	c.12550	p.T4184A	0.000	NULL	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570				57	0	0.00	49	7	12.50
FAT3	0	genome.wustl.edu	37	11	92507205	92507206	+	Splice_Site	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	92507205	92507206	-	G	INS	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	splice_site_ins	c.4196-2_4196-1	e6-1	1.000:1.000	-	-	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1			52	0	0.00	37	16	30.19
FAT3	0	genome.wustl.edu	37	11	92570878	92570878	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	92570878	92570878	C	T	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.10274	p.A3425V	0.910	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	67	0	0.00	49	10	16.95
FAT3	0	genome.wustl.edu	37	11	92616433	92616433	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	92616433	92616433	C	T	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.12811	p.P4271S	1.000	NULL	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323	tier1	-	-	39	0	0.00	40	11	21.57
FBF1	0	genome.wustl.edu	37	17	73910971	73910971	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	73910971	73910971	C	T	SNP	FBF1	ENST00000389570	human	ensembl	74_37	-1	known	missense	c.2629	p.G877R	0.981	NULL	superfamily_HRDC-like	-	no_errors	FBF1	HGNC	ENSG00000188878	tier1	-	-	146	0	0.00	93	22	19.13
FBLL1	0	genome.wustl.edu	37	5	167957293	167957293	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	167957293	167957293	G	A	SNP	FBLL1	ENST00000338333	human	ensembl	74_37	+1	putative	missense	c.784	p.A262T	1.000	pfam_Fibrillarin,pirsf_Fibrillarin,prints_Fibrillarin	pfam_Fibrillarin,pirsf_Fibrillarin,prints_Fibrillarin	-	no_errors	FBLL1	HGNC	ENSG00000188573	tier1	-	-	35	0	0.00	28	9	23.68
FBLN2	0	genome.wustl.edu	37	3	13612491	13612491	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	13612491	13612491	G	-	DEL	FBLN2	ENST00000404922	human	ensembl	74_37	+1	known	frame_shift_del	c.636	p.G214fs	0.000	NULL	pfam_EGF-like_Ca-bd_dom,pfam_Anaphylatoxin/fibulin,superfamily_Anaphylatoxin_comp_syst,smart_EG-like_dom,smart_Anaphylatoxin/fibulin,smart_EGF-like_Ca-bd_dom,pfscan_Anaphylatoxin/fibulin,pfscan_EG-like_dom	-	no_errors	FBLN2	HGNC	ENSG00000163520	tier1			43	0	0.00	45	8	15.09
FBN1	0	genome.wustl.edu	37	15	48784744	48784744	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	48784744	48784744	T	-	DEL	FBN1	ENST00000316623	human	ensembl	74_37	-1	known	frame_shift_del	c.2768	p.N923fs	1.000	pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_FBN,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN1	HGNC	ENSG00000166147	tier1			88	0	0.00	51	14	21.54
FBN2	0	genome.wustl.edu	37	5	127873181	127873181	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	127873181	127873181	C	T	SNP	FBN2	ENST00000262464	human	ensembl	74_37	-1	known	missense	c.116	p.R39Q	0.436	pirsf_FBN	pirsf_FBN,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Cadherin-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	FBN2	HGNC	ENSG00000138829	tier1	-	-	39	0	0.00	22	4	15.38
FBN3	0	genome.wustl.edu	37	19	8145954	8145954	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	8145954	8145954	G	A	SNP	FBN3	ENST00000270509	human	ensembl	74_37	-1	known	silent	c.7386	p.V2462	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_FBN,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449	tier1	-	-	96	0	0.00	80	9	10.00
FBXO10	0	genome.wustl.edu	37	9	37541711	37541711	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	37541711	37541711	G	A	SNP	FBXO10	ENST00000432825	human	ensembl	74_37	-1	known	missense	c.55	p.H19Y	1.000	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	pfam_F-box_dom,superfamily_Pectin_lyase_fold/virulence,superfamily_F-box_dom,smart_F-box_dom,smart_PbH1,smart_Carb-bd_sugar_hydrolysis-dom,pfscan_F-box_dom,tigrfam_Para_beta_helix_rpt-2	-	no_errors	FBXO10	HGNC	ENSG00000147912	tier1	-	-	59	0	0.00	35	13	27.08
FBXO31	0	genome.wustl.edu	37	16	87364978	87364978	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	87364978	87364978	G	T	SNP	FBXO31	ENST00000311635	human	ensembl	74_37	-1	known	silent	c.1536	p.V512	1.000	NULL	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO31	HGNC	ENSG00000103264	tier1	-	-	77	0	0.00	42	13	23.64
FBXO31	0	genome.wustl.edu	37	16	87369001	87369001	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	87369001	87369001	G	T	SNP	FBXO31	ENST00000311635	human	ensembl	74_37	-1	known	missense	c.905	p.P302H	1.000	NULL	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO31	HGNC	ENSG00000103264	tier1	-	-	204	0	0.00	169	17	9.14
FBXO7	0	genome.wustl.edu	37	22	32881117	32881117	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	32881117	32881117	G	A	SNP	FBXO7	ENST00000266087	human	ensembl	74_37	+1	known	silent	c.708	p.L236	1.000	pfam_FP_dom	pfam_FP_dom,pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO7	HGNC	ENSG00000100225	tier1	-	-	53	0	0.00	48	8	14.29
FBXW10	0	genome.wustl.edu	37	17	18647920	18647920	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	18647920	18647920	C	T	SNP	FBXW10	ENST00000308799	human	ensembl	74_37	+1	known	silent	c.363	p.I121	0.005	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW10	HGNC	ENSG00000171931	tier1	-	-	103	0	0.00	110	18	14.06
FBXW11	0	genome.wustl.edu	37	5	171295620	171295620	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	171295620	171295620	C	T	SNP	FBXW11	ENST00000522376	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.548	-	-	-	no_errors	FBXW11	HGNC	ENSG00000072803	tier1	-	-	38	0	0.00	27	17	38.64
FBXW2	0	genome.wustl.edu	37	9	123550234	123550234	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	123550234	123550234	T	C	SNP	FBXW2	ENST00000608872	human	ensembl	74_37	-1	known	silent	c.303	p.A101	0.161	superfamily_F-box_dom,pfscan_F-box_dom	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW2	HGNC	ENSG00000119402				18	0	0.00	28	2	6.67
FBXW7	0	genome.wustl.edu	37	4	153244156	153244156	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	153244156	153244156	C	-	DEL	FBXW7	ENST00000281708	human	ensembl	74_37	-1	known	frame_shift_del	c.2001	p.S668fs	0.990	smart_WD40_repeat	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW7	HGNC	ENSG00000109670	tier1			87	0	0.00	57	15	20.83
FCGBP	0	genome.wustl.edu	37	19	40433822	40433822	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	40433822	40433822	G	-	DEL	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	frame_shift_del	c.447	p.G150fs	0.000	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920	tier1			33	0	0.00	25	6	19.35
FCHSD1	0	genome.wustl.edu	37	5	141028581	141028581	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	141028581	141028581	G	A	SNP	FCHSD1	ENST00000435817	human	ensembl	74_37	-1	known	silent	c.519	p.N173	0.996	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_FCH_dom,superfamily_SH3_domain,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain	-	no_errors	FCHSD1	HGNC	ENSG00000197948	tier1	-	-	61	0	0.00	42	8	16.00
FEM1A	0	genome.wustl.edu	37	19	4792689	4792689	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	4792689	4792689	T	C	SNP	FEM1A	ENST00000269856	human	ensembl	74_37	+1	known	missense	c.823	p.S275P	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	FEM1A	HGNC	ENSG00000141965	tier1	-	-	40	0	0.00	39	5	11.36
FER1L6	0	genome.wustl.edu	37	8	125033884	125033884	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	125033884	125033884	A	-	DEL	FER1L6	ENST00000399018	human	ensembl	74_37	+1	known	frame_shift_del	c.2108	p.I705fs	0.993	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,superfamily_ABC1_TM_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	FER1L6	HGNC	ENSG00000214814	tier1			47	0	0.00	66	9	12.00
FERMT2	0	genome.wustl.edu	37	14	53326539	53326542	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	53326539	53326542	TTTT	-	DEL	FERMT2	ENST00000557255	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.120:0.125:0.144:0.160	-	-	-	no_errors	FERMT2	HGNC	ENSG00000073712	tier1			21	0	0.00	16	3	15.79
FEZF2	0	genome.wustl.edu	37	3	62358148	62358148	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	62358148	62358148	G	A	SNP	FEZF2	ENST00000283268	human	ensembl	74_37	-1	known	silent	c.396	p.G132	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	FEZF2	HGNC	ENSG00000153266				15	0	0.00	12	3	18.75
FGA	0	genome.wustl.edu	37	4	155505987	155505988	+	Splice_Site	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	155505987	155505988	-	A	INS	FGA	ENST00000302053	human	ensembl	74_37	-1	known	splice_site_ins	c.1892-3_1892-2	e6-2	1.000:1.000	-	-	-	no_errors	FGA	HGNC	ENSG00000171560	tier1			39	0	0.00	42	4	8.70
FGD6	0	genome.wustl.edu	37	12	95501371	95501371	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	95501371	95501371	G	T	SNP	FGD6	ENST00000343958	human	ensembl	74_37	-1	known	silent	c.3301	p.R1101	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD6	HGNC	ENSG00000180263				38	0	0.00	28	4	12.50
FGD6	0	genome.wustl.edu	37	12	95603382	95603382	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	95603382	95603382	G	A	SNP	FGD6	ENST00000343958	human	ensembl	74_37	-1	known	missense	c.1678	p.R560W	0.922	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD6	HGNC	ENSG00000180263				37	0	0.00	20	5	20.00
FGF14	0	genome.wustl.edu	37	13	102568949	102568949	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	102568949	102568949	G	A	SNP	FGF14	ENST00000376143	human	ensembl	74_37	-1	known	missense	c.47	p.A16V	1.000	NULL	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF14	HGNC	ENSG00000102466	tier1	-	-	53	0	0.00	30	9	19.15
FGF5	0	genome.wustl.edu	37	4	81196142	81196142	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	81196142	81196142	A	-	DEL	FGF5	ENST00000312465	human	ensembl	74_37	+1	known	frame_shift_del	c.435	p.G148fs	1.000	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF5	HGNC	ENSG00000138675	tier1			60	0	0.00	42	10	19.23
FGF5	0	genome.wustl.edu	37	4	81208236	81208236	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	81208236	81208236	T	-	DEL	FGF5	ENST00000503413	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.035	-	-	-	no_errors	FGF5	HGNC	ENSG00000138675	tier1			63	0	0.00	58	9	13.43
FGFR2	0	genome.wustl.edu	37	10	123279622	123279622	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	123279622	123279622	G	A	SNP	FGFR2	ENST00000457416	human	ensembl	74_37	-1	known	silent	c.810	p.V270	0.032	pirsf_FGF_rcpt_fam,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FGFR2	HGNC	ENSG00000066468	tier1	rs150488750	-	71	0	0.00	37	6	13.95
FIGNL1	0	genome.wustl.edu	37	7	50513032	50513032	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	50513032	50513032	G	A	SNP	FIGNL1	ENST00000356889	human	ensembl	74_37	-1	known	nonsense	c.1954	p.R652*	1.000	pfam_Vps4_C,superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	FIGNL1	HGNC	ENSG00000132436	tier1	-	-	69	0	0.00	68	5	6.85
FILIP1	0	genome.wustl.edu	37	6	76018573	76018573	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	76018573	76018573	C	T	SNP	FILIP1	ENST00000237172	human	ensembl	74_37	-1	known	missense	c.3476	p.R1159H	1.000	NULL	pfam_Cortactin-binding_p2_N,prints_Tropomyosin	-	no_errors	FILIP1	HGNC	ENSG00000118407	tier1	rs147152005	-	98	0	0.00	58	15	20.55
FJX1	0	genome.wustl.edu	37	11	35642248	35642248	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	35642248	35642248	A	-	DEL	FJX1	ENST00000532914	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	FJX1	HGNC	ENSG00000179431	tier1			39	0	0.00	31	14	31.11
FKBP10	0	genome.wustl.edu	37	17	39975559	39975559	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	39975559	39975559	C	-	DEL	FKBP10	ENST00000321562	human	ensembl	74_37	+1	known	frame_shift_del	c.825	p.G278fs	0.062	NULL	pfam_PPIase_FKBP_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP10	HGNC	ENSG00000141756	tier1			43	0	0.00	42	4	8.70
FKBP15	0	genome.wustl.edu	37	9	115941002	115941002	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	115941002	115941002	T	-	DEL	FKBP15	ENST00000238256	human	ensembl	74_37	-1	known	frame_shift_del	c.1994	p.K665fs	1.000	superfamily_Regulat_G_prot_signal_superfam	pfam_PPIase_FKBP_dom,superfamily_Regulat_G_prot_signal_superfam,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP15	HGNC	ENSG00000119321	tier1			67	0	0.00	47	8	14.55
FKBP5	0	genome.wustl.edu	37	6	35565028	35565028	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	35565028	35565028	G	T	SNP	FKBP5	ENST00000357266	human	ensembl	74_37	-1	known	missense	c.662	p.P221Q	1.000	pfam_PPIase_FKBP_dom,pfscan_PPIase_FKBP_dom	pfam_PPIase_FKBP_dom,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP5	HGNC	ENSG00000096060				75	0	0.00	76	4	5.00
FLNA	0	genome.wustl.edu	37	X	153581543	153581543	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	153581543	153581543	C	-	DEL	FLNA	ENST00000369850	human	ensembl	74_37	-1	known	frame_shift_del	c.6052	p.E2018fs	1.000	superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNA	HGNC	ENSG00000196924	tier1			76	0	0.00	37	6	13.95
FLNB	0	genome.wustl.edu	37	3	58117681	58117681	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	58117681	58117681	G	A	SNP	FLNB	ENST00000490882	human	ensembl	74_37	+1	novel	missense	c.4418	p.R1473H	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNB	HGNC	ENSG00000136068	tier1	-	-	49	0	0.00	35	7	16.67
FLT3	0	genome.wustl.edu	37	13	28608066	28608066	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	28608066	28608066	T	C	SNP	FLT3	ENST00000380982	human	ensembl	74_37	-1	known	missense	c.1900	p.K634E	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FLT3	HGNC	ENSG00000122025	tier1	-	-	64	0	0.00	44	9	16.98
FLT4	0	genome.wustl.edu	37	5	180038335	180038335	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	180038335	180038335	C	T	SNP	FLT4	ENST00000261937	human	ensembl	74_37	-1	known	missense	c.3682	p.A1228T	0.895	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR3_rcpt	-	no_errors	FLT4	HGNC	ENSG00000037280	tier1	-	-	68	0	0.00	61	8	11.59
FLT4	0	genome.wustl.edu	37	5	180050970	180050970	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	180050970	180050970	C	T	SNP	FLT4	ENST00000261937	human	ensembl	74_37	-1	known	missense	c.1513	p.D505N	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR3_rcpt	-	no_errors	FLT4	HGNC	ENSG00000037280	tier1	-	-	112	0	0.00	77	12	13.48
FLVCR2	0	genome.wustl.edu	37	14	76045399	76045399	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	76045399	76045399	G	A	SNP	FLVCR2	ENST00000238667	human	ensembl	74_37	+1	known	silent	c.84	p.S28	0.002	superfamily_Trimer_LpxA-like	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,superfamily_Trimer_LpxA-like,pfscan_MFS_dom	-	no_errors	FLVCR2	HGNC	ENSG00000119686	tier1	-	-	71	0	0.00	35	21	37.50
FMN2	0	genome.wustl.edu	37	1	240256444	240256444	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	240256444	240256444	G	A	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	silent	c.1035	p.T345	0.003	NULL	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816	tier1	-	-	21	0	0.00	13	4	23.53
FN1	0	genome.wustl.edu	37	2	216256480	216256480	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	216256480	216256480	A	G	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	missense	c.4127	p.V1376A	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414	tier1	-	-	50	0	0.00	51	11	17.74
FNBP1	0	genome.wustl.edu	37	9	132720823	132720823	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	132720823	132720823	C	T	SNP	FNBP1	ENST00000446176	human	ensembl	74_37	-1	known	missense	c.355	p.D119N	1.000	superfamily_Ribosomal_S20	pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Ribosomal_S20,superfamily_HR1_rho-bd,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain	-	no_errors	FNBP1	HGNC	ENSG00000187239	tier1	-	-	48	0	0.00	55	9	14.06
FNDC1	0	genome.wustl.edu	37	6	159653589	159653589	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	159653589	159653589	G	A	SNP	FNDC1	ENST00000297267	human	ensembl	74_37	+1	known	missense	c.2045	p.R682H	0.000	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC1	HGNC	ENSG00000164694				32	0	0.00	26	3	10.34
FNTB	0	genome.wustl.edu	37	14	65482414	65482414	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	65482414	65482414	C	-	DEL	FNTB	ENST00000447296	human	ensembl	74_37	+1	known	frame_shift_del	c.456	p.Q154fs	0.999	superfamily_Terpenoid_cyclase/PrenylTrfase	pfam_Prenyltrans,pfam_Transcrpt_activator_Churchill,superfamily_Terpenoid_cyclase/PrenylTrfase	-	no_errors	FNTB	HGNC	ENSG00000257365	tier1			99	0	0.00	74	13	14.94
FOLH1	0	genome.wustl.edu	37	11	49175878	49175878	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	49175878	49175878	C	T	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	missense	c.1790	p.C597Y	1.000	superfamily_TFR-like_dimer_dom	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205	tier1	-	-	40	0	0.00	44	16	26.67
FOSL1	0	genome.wustl.edu	37	11	65660629	65660629	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	65660629	65660629	C	-	DEL	FOSL1	ENST00000312562	human	ensembl	74_37	-1	known	frame_shift_del	c.544	p.D182fs	0.008	NULL	pfam_bZIP,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP,prints_Leuzip_Fos	-	no_errors	FOSL1	HGNC	ENSG00000175592	tier1			42	0	0.00	27	9	25.00
FOXC2	0	genome.wustl.edu	37	16	86602228	86602228	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	86602228	86602228	C	T	SNP	FOXC2	ENST00000320354	human	ensembl	74_37	+1	known	silent	c.1287	p.S429	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXC2	HGNC	ENSG00000176692				21	0	0.00	9	3	25.00
FOXD3	0	genome.wustl.edu	37	1	63789525	63789525	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	63789525	63789525	G	A	SNP	FOXD3	ENST00000371116	human	ensembl	74_37	+1	known	missense	c.796	p.G266S	0.987	NULL	pfam_TF_fork_head,smart_TF_fork_head,prints_TF_fork_head,pfscan_TF_fork_head	-	no_errors	FOXD3	HGNC	ENSG00000187140				12	0	0.00	5	4	44.44
FOXG1	0	genome.wustl.edu	37	14	29237758	29237758	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	29237758	29237758	T	C	SNP	FOXG1	ENST00000313071	human	ensembl	74_37	+1	known	missense	c.1273	p.S425P	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXG1	HGNC	ENSG00000176165				53	0	0.00	48	6	11.11
FOXH1	0	genome.wustl.edu	37	8	145701036	145701036	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	145701036	145701036	G	A	SNP	FOXH1	ENST00000377317	human	ensembl	74_37	-1	known	missense	c.104	p.P35L	0.992	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXH1	HGNC	ENSG00000160973	tier1	-	-	165	0	0.00	135	55	28.95
FOXI3	0	genome.wustl.edu	37	2	88751468	88751468	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	88751468	88751468	T	C	SNP	FOXI3	ENST00000398142	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FOXI3	HGNC	ENSG00000214336	tier1	-	-	146	0	0.00	130	17	11.56
FOXI3	0	genome.wustl.edu	37	2	88751645	88751645	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	88751645	88751645	C	T	SNP	FOXI3	ENST00000398142	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FOXI3	HGNC	ENSG00000214336				38	0	0.00	39	4	9.30
FOXO3	0	genome.wustl.edu	37	6	108882886	108882886	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	108882886	108882886	A	C	SNP	FOXO3	ENST00000343882	human	ensembl	74_37	+1	known	missense	c.475	p.N159H	1.000	smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXO3	HGNC	ENSG00000118689	tier1	-	-	57	0	0.00	39	16	29.09
FOXP1	0	genome.wustl.edu	37	3	71008342	71008345	+	RNA	DEL	TTTT	TTTT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TTTT	TTTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	71008342	71008345	TTTT	-	DEL	FOXP1	ENST00000460805	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.439:0.024:0.024:0.017	-	-	-	no_errors	FOXP1	HGNC	ENSG00000114861	tier1			36	0	0.00	34	5	12.82
FOXRED2	0	genome.wustl.edu	37	22	36897401	36897401	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	36897401	36897401	C	T	SNP	FOXRED2	ENST00000216187	human	ensembl	74_37	-1	known	missense	c.1103	p.R368Q	0.957	NULL	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	-	no_errors	FOXRED2	HGNC	ENSG00000100350	tier1	-	-	69	0	0.00	34	7	16.28
FPGT	0	genome.wustl.edu	37	1	74670324	74670324	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	74670324	74670324	C	T	SNP	FPGT	ENST00000370898	human	ensembl	74_37	+1	known	missense	c.632	p.T211M	0.018	pfam_Fucokinase,pirsf_Fucose-1-phosphate_GuaTrfase	pfam_Fucokinase,superfamily_Trimer_LpxA-like,pirsf_Fucose-1-phosphate_GuaTrfase	-	no_errors	FPGT	HGNC	ENSG00000254685	tier1	-	-	54	0	0.00	22	17	43.59
FPR3	0	genome.wustl.edu	37	19	52327515	52327515	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	52327515	52327515	G	T	SNP	FPR3	ENST00000339223	human	ensembl	74_37	+1	known	missense	c.514	p.G172W	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Formyl_pep_rcpt,prints_GPCR_Rhodpsn,prints_Anphylx_rcpt	-	no_errors	FPR3	HGNC	ENSG00000187474	tier1	-	-	60	0	0.00	55	8	12.70
FREM2	0	genome.wustl.edu	37	13	39262085	39262085	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	39262085	39262085	G	A	SNP	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	missense	c.604	p.A202T	0.483	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	tier1	-	-	68	0	0.00	61	6	8.96
FRMD6	0	genome.wustl.edu	37	14	52169254	52169254	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	52169254	52169254	A	T	SNP	FRMD6	ENST00000344768	human	ensembl	74_37	+1	known	missense	c.319	p.M107L	0.998	pfam_FERM_N,smart_Band_41_domain,pfscan_FERM_domain	pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	-	no_errors	FRMD6	HGNC	ENSG00000139926	tier1	-	-	64	0	0.00	50	4	7.41
FRMPD1	0	genome.wustl.edu	37	9	37737192	37737192	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	37737192	37737192	C	A	SNP	FRMPD1	ENST00000377765	human	ensembl	74_37	+1	known	missense	c.1501	p.L501I	1.000	NULL	pfam_FERM_central,pfam_PDZ,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,smart_PDZ,smart_Band_41_domain,pfscan_FERM_domain,pfscan_PDZ	-	no_errors	FRMPD1	HGNC	ENSG00000070601	tier1	-	-	58	0	0.00	42	5	10.64
FRMPD2	0	genome.wustl.edu	37	10	49440276	49440276	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	49440276	49440276	G	A	SNP	FRMPD2	ENST00000374201	human	ensembl	74_37	-1	known	silent	c.1050	p.N350	0.382	pfam_FERM_N,smart_Band_41_domain,pfscan_FERM_domain	pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_PDZ,superfamily_FERM_central,superfamily_Kinase-like_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,pfscan_FERM_domain,pfscan_PDZ,prints_Band_41_fam	-	no_errors	FRMPD2	HGNC	ENSG00000170324	tier1	-	-	36	0	0.00	23	9	28.12
FSCN3	0	genome.wustl.edu	37	7	127240252	127240252	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	127240252	127240252	G	-	DEL	FSCN3	ENST00000265825	human	ensembl	74_37	+1	known	frame_shift_del	c.1296	p.G434fs	1.000	superfamily_Actin_cross-linking	pfam_Fascin-domain,superfamily_Actin_cross-linking	-	no_errors	FSCN3	HGNC	ENSG00000106328	tier1			74	0	0.00	44	7	13.73
FSHR	0	genome.wustl.edu	37	2	49190770	49190770	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	49190770	49190770	G	A	SNP	FSHR	ENST00000406846	human	ensembl	74_37	-1	known	missense	c.1190	p.P397L	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_GnHR_TM,pfam_LRR-contain_N,pfam_Leu-rich_rpt,smart_LRR-contain_N,pfscan_GPCR_Rhodpsn_7TM,prints_FSH_rcpt,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,prints_TSH_rcpt	-	no_errors	FSHR	HGNC	ENSG00000170820	tier1	-	-	37	0	0.00	20	5	20.00
FSTL5	0	genome.wustl.edu	37	4	162463686	162463686	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	162463686	162463686	T	C	SNP	FSTL5	ENST00000306100	human	ensembl	74_37	-1	known	missense	c.1175	p.Q392R	1.000	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Kazal_dom,pfam_Ig_V-set,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL5	HGNC	ENSG00000168843	tier1	-	-	70	0	0.00	59	15	20.27
FTCD	0	genome.wustl.edu	37	21	47571590	47571591	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	47571590	47571591	-	C	INS	FTCD	ENST00000359679	human	ensembl	74_37	-1	known	frame_shift_ins	c.518_517	p.A173fs	1.000:1.000	pfam_Formiminotransferase_N,superfamily_FormiminoTrfase_N/C_subdom,tigrfam_Formiminotransferase_cat	pfam_Formiminotransferase_N,pfam_Formiminotransferase_C,pfam_Cyclodeamin/CycHdrlase,superfamily_FormiminoTrfase_N/C_subdom,superfamily_Cyclodeamin/CycHdrlase,tigrfam_Formiminotransferase_cat	-	no_errors	FTCD	HGNC	ENSG00000160282	tier1			90	0	0.00	62	24	27.91
FTMT	0	genome.wustl.edu	37	5	121187725	121187725	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	121187725	121187725	C	T	SNP	FTMT	ENST00000321339	human	ensembl	74_37	+1	known	missense	c.67	p.R23C	0.000	NULL	pfam_Ferritin_DPS_dom,superfamily_Ferritin-like_SF,pfscan_Ferritin-like_diiron	-	no_errors	FTMT	HGNC	ENSG00000181867				44	0	0.00	30	5	13.89
FUNDC1	0	genome.wustl.edu	37	X	44401202	44401202	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	44401202	44401202	G	A	SNP	FUNDC1	ENST00000378045	human	ensembl	74_37	-1	known	silent	c.174	p.G58	0.589	pfam_FUN14	pfam_FUN14	-	no_errors	FUNDC1	HGNC	ENSG00000069509	tier1	-	-	65	0	0.00	30	6	16.67
FYB	0	genome.wustl.edu	37	5	39153687	39153687	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	39153687	39153687	C	T	SNP	FYB	ENST00000540520	human	ensembl	74_37	-1	known	silent	c.1185	p.T395	0.000	NULL	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain	-	no_errors	FYB	HGNC	ENSG00000082074	tier1	-	-	112	0	0.00	86	15	14.85
FZD2	0	genome.wustl.edu	37	17	42635889	42635889	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	42635889	42635889	G	A	SNP	FZD2	ENST00000315323	human	ensembl	74_37	+1	known	missense	c.833	p.R278Q	1.000	pfam_Frizzled,pfscan_GPCR_2-like,prints_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD2	HGNC	ENSG00000180340				36	0	0.00	29	3	9.38
FZD3	0	genome.wustl.edu	37	8	28420373	28420373	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	28420373	28420373	C	T	SNP	FZD3	ENST00000240093	human	ensembl	74_37	+1	known	nonsense	c.1846	p.R616*	1.000	NULL	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD3	HGNC	ENSG00000104290	tier1	-	-	41	0	0.00	42	17	28.81
GAA	0	genome.wustl.edu	37	17	78086479	78086479	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	78086479	78086479	C	A	SNP	GAA	ENST00000302262	human	ensembl	74_37	+1	known	missense	c.1857	p.S619R	0.999	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	GAA	HGNC	ENSG00000171298	tier1	-	-	117	0	0.00	61	15	19.74
GAB4	0	genome.wustl.edu	37	22	17488851	17488852	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	17488851	17488852	-	G	INS	GAB4	ENST00000400588	human	ensembl	74_37	-1	known	frame_shift_ins	c.154_153	p.E51fs	0.063:0.067	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	GAB4	HGNC	ENSG00000215568	tier1			48	0	0.00	37	7	15.91
GABRA2	0	genome.wustl.edu	37	4	46314639	46314639	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	46314639	46314639	A	G	SNP	GABRA2	ENST00000540012	human	ensembl	74_37	-1	known	missense	c.185	p.M62T	1.000	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa2_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRA2	HGNC	ENSG00000151834	tier1	-	-	67	0	0.00	53	27	33.75
GABRA4	0	genome.wustl.edu	37	4	46967130	46967130	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	46967130	46967130	A	G	SNP	GABRA4	ENST00000264318	human	ensembl	74_37	-1	known	missense	c.991	p.F331L	1.000	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABBAa4_rcpt,prints_GABAA_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA4	HGNC	ENSG00000109158	tier1	-	-	62	0	0.00	44	8	15.38
GABRA5	0	genome.wustl.edu	37	15	27128522	27128522	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	27128522	27128522	A	C	SNP	GABRA5	ENST00000335625	human	ensembl	74_37	+1	known	missense	c.315	p.K105N	0.904	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,prints_Neur_channel,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa5_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA5	HGNC	ENSG00000186297	tier1	-	-	75	0	0.00	48	18	27.27
GAL3ST2	0	genome.wustl.edu	37	2	242743356	242743356	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	242743356	242743356	C	T	SNP	GAL3ST2	ENST00000192314	human	ensembl	74_37	+1	known	silent	c.972	p.D324	0.000	pfam_Gal-3-0_sulfotransfrase	pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	-	no_errors	GAL3ST2	HGNC	ENSG00000154252	tier1	-	-	23	0	0.00	7	3	30.00
GALNT10	0	genome.wustl.edu	37	5	153796475	153796475	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	153796475	153796475	G	A	SNP	GALNT10	ENST00000297107	human	ensembl	74_37	+1	known	silent	c.1755	p.Q585	1.000	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT10	HGNC	ENSG00000164574	tier1	-	-	78	0	0.00	68	5	6.76
GALNT13	0	genome.wustl.edu	37	2	155303149	155303149	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	155303149	155303149	C	T	SNP	GALNT13	ENST00000409237	human	ensembl	74_37	+1	known	missense	c.1570	p.H524Y	0.964	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT13	HGNC	ENSG00000144278	tier1	-	-	48	0	0.00	28	16	36.36
GALNT8	0	genome.wustl.edu	37	12	4848347	4848347	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	4848347	4848347	T	C	SNP	GALNT8	ENST00000252318	human	ensembl	74_37	+1	known	silent	c.528	p.Y176	0.490	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT8	HGNC	ENSG00000130035	tier1	-	-	46	0	0.00	48	13	21.31
GALNT8	0	genome.wustl.edu	37	12	4848418	4848418	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	4848418	4848418	C	G	SNP	GALNT8	ENST00000252318	human	ensembl	74_37	+1	known	missense	c.599	p.A200G	0.994	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT8	HGNC	ENSG00000130035	tier1	-	-	61	0	0.00	48	15	23.81
GALNTL5	0	genome.wustl.edu	37	7	151680108	151680108	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	151680108	151680108	G	A	SNP	GALNTL5	ENST00000392800	human	ensembl	74_37	+1	known	missense	c.406	p.A136T	0.944	NULL	pfam_Glyco_trans_2	-	no_errors	GALNTL5	HGNC	ENSG00000106648	tier1	-	-	49	0	0.00	42	7	14.29
GAP43	0	genome.wustl.edu	37	3	115395200	115395200	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	115395200	115395200	C	-	DEL	GAP43	ENST00000305124	human	ensembl	74_37	+1	known	frame_shift_del	c.371	p.Q126fs	1.000	pfam_Neuromodulin_C	pfam_Neuromodulin_C,pfam_Neuromodulin_gap-junction_N,pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Neuromodulin	-	no_errors	GAP43	HGNC	ENSG00000172020	tier1			99	0	0.00	76	5	6.17
GAPDH	0	genome.wustl.edu	37	12	6646278	6646278	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	6646278	6646278	G	-	DEL	GAPDH	ENST00000229239	human	ensembl	74_37	+1	known	frame_shift_del	c.339	p.G115fs	1.000	pfam_GlycerAld_3-P_DH_NAD(P)-bd,smart_GlycerAld_3-P_DH_NAD(P)-bd,pirsf_GlycerAld/Erythrose_P_DH,prints_GlycerAld/Erythrose_P_DH,tigrfam_Glyceraldehyde-3-P_DH_1	pfam_GlycerAld_3-P_DH_cat,pfam_GlycerAld_3-P_DH_NAD(P)-bd,smart_GlycerAld_3-P_DH_NAD(P)-bd,pirsf_GlycerAld/Erythrose_P_DH,prints_GlycerAld/Erythrose_P_DH,tigrfam_Glyceraldehyde-3-P_DH_1	-	no_errors	GAPDH	HGNC	ENSG00000111640	tier1			57	0	0.00	42	13	23.64
GAREM	0	genome.wustl.edu	37	18	29867973	29867973	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	29867973	29867973	G	A	SNP	GAREM	ENST00000269209	human	ensembl	74_37	-1	known	missense	c.587	p.P196L	1.000	NULL	superfamily_SAM/pointed	-	no_errors	GAREM	HGNC	ENSG00000141441	tier1	-	-	55	0	0.00	42	10	19.23
GATA3	0	genome.wustl.edu	37	10	8097653	8097653	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	8097653	8097653	G	A	SNP	GATA3	ENST00000379328	human	ensembl	74_37	+1	known	missense	c.35	p.S12N	1.000	pirsf_TF_GATA-1/2/3	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485	tier1	-	-	39	0	0.00	26	12	31.58
GATA3	0	genome.wustl.edu	37	10	8097679	8097679	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	8097679	8097679	G	A	SNP	GATA3	ENST00000379328	human	ensembl	74_37	+1	known	missense	c.61	p.G21R	1.000	pirsf_TF_GATA-1/2/3	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA3	HGNC	ENSG00000107485	tier1	-	-	56	0	0.00	56	6	9.68
GATM	0	genome.wustl.edu	37	15	45668948	45668948	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	45668948	45668948	G	-	DEL	GATM	ENST00000396659	human	ensembl	74_37	-1	known	frame_shift_del	c.139	p.R47fs	0.616	NULL	NULL	-	no_errors	GATM	HGNC	ENSG00000171766	tier1			43	0	0.00	30	7	18.92
GATS	0	genome.wustl.edu	37	7	99809346	99809346	+	RNA	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	99809346	99809346	C	A	SNP	GATS	ENST00000328453	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GATS	Clone_based_vega_gene	ENSG00000239521	tier1	-	-	28	0	0.00	22	7	24.14
GBP7	0	genome.wustl.edu	37	1	89630424	89630424	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	89630424	89630424	T	A	SNP	GBP7	ENST00000294671	human	ensembl	74_37	-1	known	missense	c.308	p.D103V	0.280	pfam_Guanylate-bd_N,superfamily_P-loop_NTPase	pfam_Guanylate-bd_N,pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP7	HGNC	ENSG00000213512	tier1	-	-	71	0	0.00	69	10	12.66
GCC1	0	genome.wustl.edu	37	7	127223205	127223205	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	127223205	127223205	G	A	SNP	GCC1	ENST00000321407	human	ensembl	74_37	-1	known	silent	c.1191	p.R397	0.880	NULL	pfam_GRIP,superfamily_ARM-type_fold,smart_GRIP,pfscan_GRIP	-	no_errors	GCC1	HGNC	ENSG00000179562				28	0	0.00	13	3	18.75
GCH1	0	genome.wustl.edu	37	14	55310393	55310393	+	RNA	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	55310393	55310393	C	A	SNP	GCH1	ENST00000254299	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	GCH1	HGNC	ENSG00000131979	tier1	-	-	30	0	0.00	17	16	48.48
GCN1L1	0	genome.wustl.edu	37	12	120580391	120580391	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	120580391	120580391	G	-	DEL	GCN1L1	ENST00000300648	human	ensembl	74_37	-1	known	frame_shift_del	c.5749	p.R1917fs	1.000	superfamily_ARM-type_fold	pfam_DUF3554,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	GCN1L1	HGNC	ENSG00000089154	tier1			104	0	0.00	64	27	29.67
GCNT2	0	genome.wustl.edu	37	6	10557097	10557097	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	10557097	10557097	C	T	SNP	GCNT2	ENST00000316170	human	ensembl	74_37	+1	known	silent	c.441	p.N147	0.576	pfam_Glyco_trans_14	pfam_Glyco_trans_14	-	no_errors	GCNT2	HGNC	ENSG00000111846	tier1	-	-	27	0	0.00	28	6	17.65
GCSHP3	0	genome.wustl.edu	37	2	206980715	206980715	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	206980715	206980715	T	-	DEL	GCSHP3	ENST00000453039	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.033	-	-	-	no_errors	AC007383.4	Clone_based_vega_gene	ENSG00000231955	tier1			44	0	0.00	28	8	22.22
GDAP1L1	0	genome.wustl.edu	37	20	42907925	42907926	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	42907925	42907926	-	A	INS	GDAP1L1	ENST00000342560	human	ensembl	74_37	+1	known	frame_shift_ins	c.1089_1090	p.Y365fs	1.000:1.000	NULL	pfam_Glutathione_S-Trfase_N,pfam_GST_C,superfamily_Thioredoxin-like_fold,superfamily_Glutathione-S-Trfase_C-like	-	no_errors	GDAP1L1	HGNC	ENSG00000124194	tier1			34	0	0.00	22	9	29.03
GDI2	0	genome.wustl.edu	37	10	5853844	5853844	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	5853844	5853844	A	-	DEL	GDI2	ENST00000380132	human	ensembl	74_37	-1	known	frame_shift_del	c.50	p.L17fs	0.024	prints_GDP_dissociation_inhibitor	pfam_GDP_dissociation_inhibitor,prints_RabGDI,prints_GDP_dissociation_inhibitor	-	no_errors	GDI2	HGNC	ENSG00000057608	tier1			25	0	0.00	27	8	22.86
GGA1	0	genome.wustl.edu	37	22	38019411	38019411	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	38019411	38019411	G	A	SNP	GGA1	ENST00000343632	human	ensembl	74_37	+1	known	silent	c.687	p.T229	0.001	pfam_GAT,pfscan_GAT	pfam_VHS,pfam_GAT,pfam_Clathrin_a/b/g-adaptin_app_Ig,superfamily_Coatomer/clathrin_app_Ig-like,superfamily_ENTH_VHS,smart_VHS_subgr,smart_Clathrin_a/b/g-adaptin_app_Ig,pfscan_Clathrin_g-adaptin_app,pfscan_GAT,pfscan_VHS	-	no_errors	GGA1	HGNC	ENSG00000100083	tier1	-	-	38	0	0.00	32	12	27.27
GH2	0	genome.wustl.edu	37	17	61958422	61958422	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	61958422	61958422	T	C	SNP	GH2	ENST00000332800	human	ensembl	74_37	-1	known	silent	c.258	p.T86	0.181	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	pfam_Somatotropin,superfamily_4_helix_cytokine-like_core,prints_Somatotropin	-	no_errors	GH2	HGNC	ENSG00000136487	tier1	-	-	60	0	0.00	63	6	8.57
GIMAP1	0	genome.wustl.edu	37	7	150417407	150417407	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	150417407	150417407	C	T	SNP	GIMAP1	ENST00000307194	human	ensembl	74_37	+1	known	silent	c.315	p.Y105	0.119	pfam_AIG1,superfamily_P-loop_NTPase	pfam_AIG1,superfamily_P-loop_NTPase	-	no_errors	GIMAP1	HGNC	ENSG00000213203				52	0	0.00	52	4	7.14
GIPC1	0	genome.wustl.edu	37	19	14591506	14591506	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	14591506	14591506	C	T	SNP	GIPC1	ENST00000345425	human	ensembl	74_37	-1	known	missense	c.373	p.A125T	1.000	superfamily_PDZ,pirsf_UCP038083_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_UCP038083_PDZ,pfscan_PDZ	-	no_errors	GIPC1	HGNC	ENSG00000123159	tier1	-	-	53	0	0.00	44	11	20.00
GIPC1	0	genome.wustl.edu	37	19	14593518	14593518	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	14593518	14593518	G	A	SNP	GIPC1	ENST00000345425	human	ensembl	74_37	-1	known	missense	c.271	p.R91C	1.000	pirsf_UCP038083_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_UCP038083_PDZ,pfscan_PDZ	-	no_errors	GIPC1	HGNC	ENSG00000123159				27	0	0.00	18	6	25.00
GJB6	0	genome.wustl.edu	37	13	20797451	20797451	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	20797451	20797451	G	A	SNP	GJB6	ENST00000241124	human	ensembl	74_37	-1	known	nonsense	c.169	p.Q57*	1.000	pfam_Connexin_N,smart_Connexin_N,prints_Connexin	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin	-	no_errors	GJB6	HGNC	ENSG00000121742	tier1	-	-	41	0	0.00	42	5	10.64
GK5	0	genome.wustl.edu	37	3	141923492	141923492	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	141923492	141923492	A	-	DEL	GK5	ENST00000487672	human	ensembl	74_37	-1	known	frame_shift_del	c.456	p.L153fs	0.000	NULL	pfam_Carb_kinase_FGGY_N	-	no_errors	GK5	HGNC	ENSG00000175066	tier1			47	0	0.00	47	14	22.95
GLCE	0	genome.wustl.edu	37	15	69548596	69548596	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	69548596	69548596	C	T	SNP	GLCE	ENST00000261858	human	ensembl	74_37	+1	known	missense	c.451	p.R151W	0.975	NULL	pfam_C5-epim	-	no_errors	GLCE	HGNC	ENSG00000138604	tier1	-	-	65	0	0.00	43	18	29.51
GLI2	0	genome.wustl.edu	37	2	121746728	121746728	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	121746728	121746728	G	C	SNP	GLI2	ENST00000361492	human	ensembl	74_37	+1	known	missense	c.3238	p.E1080Q	0.024	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLI2	HGNC	ENSG00000074047				23	0	0.00	25	2	7.41
GLIS2	0	genome.wustl.edu	37	16	4387133	4387133	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	4387133	4387133	G	-	DEL	GLIS2	ENST00000262366	human	ensembl	74_37	+1	known	frame_shift_del	c.1183	p.G397fs	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	GLIS2	HGNC	ENSG00000126603	tier1			25	0	0.00	11	4	26.67
GLO1	0	genome.wustl.edu	37	6	38652183	38652183	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	38652183	38652183	G	A	SNP	GLO1	ENST00000373365	human	ensembl	74_37	-1	known	missense	c.275	p.A92V	0.070	pfam_Glyas_Fos-R_dOase_dom,tigrfam_Glyoxalase_1	pfam_Glyas_Fos-R_dOase_dom,tigrfam_Glyoxalase_1	-	no_errors	GLO1	HGNC	ENSG00000124767	tier1	-	-	82	0	0.00	37	18	32.73
GLS	0	genome.wustl.edu	37	2	191765292	191765292	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	191765292	191765292	G	T	SNP	GLS	ENST00000320717	human	ensembl	74_37	+1	known	missense	c.608	p.C203F	1.000	NULL	pfam_Glutaminase,pfam_Ankyrin_rpt,superfamily_Beta-lactam/transpept-like,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_Glutaminase	-	no_errors	GLS	HGNC	ENSG00000115419	tier1	-	-	50	0	0.00	54	4	6.90
GLTSCR1	0	genome.wustl.edu	37	19	48184449	48184449	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	48184449	48184449	G	A	SNP	GLTSCR1	ENST00000396720	human	ensembl	74_37	+1	known	silent	c.2022	p.P674	0.006	NULL	NULL	-	no_errors	GLTSCR1	HGNC	ENSG00000063169	tier1	-	-	38	0	0.00	35	9	20.45
GLUD2	0	genome.wustl.edu	37	X	120182541	120182541	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	120182541	120182541	G	A	SNP	GLUD2	ENST00000328078	human	ensembl	74_37	+1	known	missense	c.1003	p.G335R	1.000	pfam_Glu/Leu/Phe/Val_DH_C,smart_Glu/Leu/Phe/Val_DH_C	pfam_Glu/Leu/Phe/Val_DH_C,pfam_Glu/Leu/Phe/Val_DH_dimer_dom,smart_Glu/Leu/Phe/Val_DH_C,prints_Glu/Leu/Phe/Val_DH	-	no_errors	GLUD2	HGNC	ENSG00000182890	tier1	-	-	64	0	0.00	32	12	27.27
GLYR1	0	genome.wustl.edu	37	16	4862229	4862229	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	4862229	4862229	C	-	DEL	GLYR1	ENST00000321919	human	ensembl	74_37	-1	known	frame_shift_del	c.1140	p.R381fs	0.170	pfam_6PGDH_NADP-bd	pfam_6PGDH_NADP-bd,pfam_PWWP_dom,superfamily_6-PGluconate_DH_C-like,smart_PWWP_dom,pfscan_PWWP_dom	-	no_errors	GLYR1	HGNC	ENSG00000140632	tier1			50	0	0.00	31	13	29.55
GMPS	0	genome.wustl.edu	37	3	155655421	155655421	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	155655421	155655421	T	C	SNP	GMPS	ENST00000496455	human	ensembl	74_37	+1	known	silent	c.2022	p.G674	0.994	pfam_GMP_synth_C	pfam_GATASE,pfam_GMP_synth_C,pfam_Peptidase_C26,pfam_NAD/GMP_synthase,pfam_QueC,pfam_Asn_synthase,pfam_tRNA-specific_2-thiouridylase,tigrfam_GMP_synth_N	-	no_errors	GMPS	HGNC	ENSG00000163655				70	0	0.00	41	4	8.89
GNA13	0	genome.wustl.edu	37	17	63052564	63052564	+	Nonsense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	63052564	63052564	T	A	SNP	GNA13	ENST00000439174	human	ensembl	74_37	-1	known	nonsense	c.148	p.K50*	1.000	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_12	-	no_errors	GNA13	HGNC	ENSG00000120063	tier1	-	-	101	0	0.00	72	15	17.05
GNA15	0	genome.wustl.edu	37	19	3162988	3162988	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	3162988	3162988	C	T	SNP	GNA15	ENST00000262958	human	ensembl	74_37	+1	known	missense	c.1096	p.R366C	1.000	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_Q	-	no_errors	GNA15	HGNC	ENSG00000060558				18	0	0.00	24	3	11.11
GNL3	0	genome.wustl.edu	37	3	52720836	52720836	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	52720836	52720836	A	-	DEL	GNL3	ENST00000418458	human	ensembl	74_37	+1	known	frame_shift_del	c.65	p.K24fs	1.000	pfam_Gnl3_N_dom	pfam_Gnl3_N_dom,pfam_GTP_binding_domain,superfamily_P-loop_NTPase	-	no_errors	GNL3	HGNC	ENSG00000163938	tier1			78	0	0.00	28	10	26.32
GOLGA4	0	genome.wustl.edu	37	3	37368076	37368076	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	37368076	37368076	C	A	SNP	GOLGA4	ENST00000361924	human	ensembl	74_37	+1	known	missense	c.4699	p.Q1567K	0.970	NULL	pfam_GRIP,superfamily_GRIP,superfamily_tRNA-bd_arm,superfamily_t-SNARE,superfamily_Prefoldin,smart_GRIP,pfscan_GRIP	-	no_errors	GOLGA4	HGNC	ENSG00000144674	tier1	-	-	46	0	0.00	48	7	12.73
GOLGA4	0	genome.wustl.edu	37	3	37368806	37368806	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	37368806	37368806	T	C	SNP	GOLGA4	ENST00000361924	human	ensembl	74_37	+1	known	missense	c.5429	p.L1810S	0.000	NULL	pfam_GRIP,superfamily_GRIP,superfamily_tRNA-bd_arm,superfamily_t-SNARE,superfamily_Prefoldin,smart_GRIP,pfscan_GRIP	-	no_errors	GOLGA4	HGNC	ENSG00000144674	tier1	-	-	33	0	0.00	28	9	24.32
GON4L	0	genome.wustl.edu	37	1	155753824	155753826	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	155753824	155753826	CTC	-	DEL	GON4L	ENST00000368331	human	ensembl	74_37	-1	known	in_frame_del	c.1845_1843	p.E615in_frame_del	0.962:0.996:1.000	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580	tier1			105	0	0.00	85	9	9.57
GPALPP1	0	genome.wustl.edu	37	13	45602077	45602078	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	45602077	45602078	-	A	INS	GPALPP1	ENST00000361121	human	ensembl	74_37	+1	known	frame_shift_ins	c.962_963	p.S324fs	1.000:1.000	pfam_DUF3752	pfam_DUF3752	-	no_errors	GPALPP1	HGNC	ENSG00000133114	tier1			106	0	0.00	81	13	13.83
GPATCH4	0	genome.wustl.edu	37	1	156571204	156571204	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	156571204	156571204	C	A	SNP	GPATCH4	ENST00000438976	human	ensembl	74_37	-1	known	missense	c.28	p.D10Y	0.004	NULL	pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	GPATCH4	HGNC	ENSG00000160818	tier1	-	-	49	0	0.00	55	7	11.29
GPBAR1	0	genome.wustl.edu	37	2	219128070	219128070	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	219128070	219128070	G	A	SNP	GPBAR1	ENST00000479077	human	ensembl	74_37	+1	known	missense	c.623	p.R208H	0.896	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	GPBAR1	HGNC	ENSG00000179921				23	0	0.00	16	3	15.79
GPBP1L1	0	genome.wustl.edu	37	1	46093288	46093288	+	RNA	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	46093288	46093288	T	A	SNP	GPBP1L1	ENST00000479235	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GPBP1L1	HGNC	ENSG00000159592	tier1	-	-	115	0	0.00	104	13	11.11
GPC4	0	genome.wustl.edu	37	X	132439923	132439923	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	132439923	132439923	G	-	DEL	GPC4	ENST00000370828	human	ensembl	74_37	-1	known	frame_shift_del	c.1032	p.K345fs	0.073	pfam_Glypican	pfam_Glypican	-	no_errors	GPC4	HGNC	ENSG00000076716	tier1			72	0	0.00	48	9	15.79
GPR123	0	genome.wustl.edu	37	10	134912169	134912169	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	134912169	134912169	C	T	SNP	GPR123	ENST00000607359	human	ensembl	74_37	+1	putative	missense	c.2317	p.R773W	0.999	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	-	no_errors	GPR123	HGNC	ENSG00000197177	tier1	-	-	89	0	0.00	50	28	35.90
GPR157	0	genome.wustl.edu	37	1	9165716	9165716	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	9165716	9165716	C	T	SNP	GPR157	ENST00000377411	human	ensembl	74_37	-1	known	silent	c.621	p.R207	0.968	pfam_GPCR_2_secretin-like,pfam_GPCR_Rhodpsn,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPCR_Rhodpsn,pfam_Frizzled,pfscan_GPCR_Rhodpsn_7TM,pfscan_GPCR_2-like,prints_GCR1-cAMP_receptor	-	no_errors	GPR157	HGNC	ENSG00000180758	tier1	-	-	37	0	0.00	28	5	15.15
GPR158	0	genome.wustl.edu	37	10	25464743	25464743	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	25464743	25464743	G	A	SNP	GPR158	ENST00000376351	human	ensembl	74_37	+1	known	missense	c.394	p.A132T	1.000	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPR158	HGNC	ENSG00000151025	tier1	-	-	68	0	0.00	47	9	16.07
GPR179	0	genome.wustl.edu	37	17	36499361	36499361	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	36499361	36499361	C	A	SNP	GPR179	ENST00000342292	human	ensembl	74_37	-1	known	missense	c.312	p.Q104H	1.000	NULL	pfam_GPCR_3_C,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C	-	no_errors	GPR179	HGNC	ENSG00000188888	tier1	-	-	54	0	0.00	46	4	8.00
GPR20	0	genome.wustl.edu	37	8	142367933	142367933	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	142367933	142367933	C	T	SNP	GPR20	ENST00000377741	human	ensembl	74_37	-1	known	missense	c.91	p.E31K	0.809	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR20	HGNC	ENSG00000204882	tier1	-	-	104	0	0.00	93	12	11.43
GPR37L1	0	genome.wustl.edu	37	1	202097525	202097527	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	202097525	202097527	CTG	-	DEL	GPR37L1	ENST00000367282	human	ensembl	74_37	+1	known	in_frame_del	c.1287_1289	p.C433in_frame_del	0.998:0.998:0.996	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPR37_orph,prints_GPCR_Rhodpsn	-	no_errors	GPR37L1	HGNC	ENSG00000170075	tier1			54	0	0.00	61	5	7.58
GPR52	0	genome.wustl.edu	37	1	174417673	174417673	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	174417673	174417673	G	A	SNP	GPR52	ENST00000367685	human	ensembl	74_37	+1	known	missense	c.424	p.A142T	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR52	HGNC	ENSG00000203737				42	0	0.00	19	5	20.83
GPR98	0	genome.wustl.edu	37	5	89939702	89939702	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	89939702	89939702	C	T	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.2636	p.T879M	1.000	smart_Calx_beta	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	tier1	rs201007778	-	63	0	0.00	35	14	28.57
GPR98	0	genome.wustl.edu	37	5	90119242	90119242	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	90119242	90119242	G	A	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	silent	c.16197	p.R5399	1.000	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	tier1	-	-	62	0	0.00	42	14	25.00
GPRIN2	0	genome.wustl.edu	37	10	47000073	47000073	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	47000073	47000073	T	C	SNP	GPRIN2	ENST00000374314	human	ensembl	74_37	+1	known	missense	c.1193	p.V398A	1.000	NULL	NULL	-	no_errors	GPRIN2	HGNC	ENSG00000204175	tier1	-	-	92	0	0.00	67	5	6.94
GPX7	0	genome.wustl.edu	37	1	53073995	53073995	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	53073995	53073995	G	T	SNP	GPX7	ENST00000361314	human	ensembl	74_37	+1	known	missense	c.462	p.K154N	1.000	superfamily_Thioredoxin-like_fold,pirsf_Glutathione_peroxidase,tigrfam_Glut_perox_Gpx7	pfam_Glutathione_peroxidase,pfam_AhpC/TSA,superfamily_Thioredoxin-like_fold,pirsf_Glutathione_peroxidase,prints_Glutathione_peroxidase,tigrfam_Glut_perox_Gpx7	-	no_errors	GPX7	HGNC	ENSG00000116157	tier1	-	-	41	0	0.00	32	5	13.51
GRB14	0	genome.wustl.edu	37	2	165353548	165353548	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	165353548	165353548	C	T	SNP	GRB14	ENST00000263915	human	ensembl	74_37	-1	known	missense	c.1352	p.R451Q	0.893	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_BPS-dom,pfam_SH2,pfam_Ras-assoc,pfam_Pleckstrin_homology,smart_Ras-assoc,smart_Pleckstrin_homology,smart_SH2,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SH2,prints_SH2	-	no_errors	GRB14	HGNC	ENSG00000115290	tier1	-	-	38	0	0.00	25	12	31.58
GREB1	0	genome.wustl.edu	37	2	11767102	11767102	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	11767102	11767102	C	T	SNP	GREB1	ENST00000234142	human	ensembl	74_37	+1	known	missense	c.4321	p.R1441W	0.321	NULL	superfamily_P-loop_NTPase	-	no_errors	GREB1	HGNC	ENSG00000196208	tier1	-	-	55	0	0.00	49	8	14.04
GRID1	0	genome.wustl.edu	37	10	87407023	87407023	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	87407023	87407023	C	A	SNP	GRID1	ENST00000327946	human	ensembl	74_37	-1	known	missense	c.2129	p.R710L	0.998	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRID1	HGNC	ENSG00000182771				57	0	0.00	53	3	5.36
GRID2	0	genome.wustl.edu	37	4	93225753	93225754	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	93225753	93225754	AA	-	DEL	GRID2	ENST00000505687	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	GRID2	HGNC	ENSG00000152208	tier1			41	0	0.00	30	10	25.00
GRIK2	0	genome.wustl.edu	37	6	102503431	102503432	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	102503431	102503432	-	A	INS	GRIK2	ENST00000421544	human	ensembl	74_37	+1	known	frame_shift_ins	c.2538_2539	p.N848fs	1.000:1.000	NULL	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK2	HGNC	ENSG00000164418	tier1			24	0	0.00	30	6	16.67
GRIK2	0	genome.wustl.edu	37	6	102503432	102503432	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	102503432	102503432	A	-	DEL	GRIK2	ENST00000421544	human	ensembl	74_37	+1	known	frame_shift_del	c.2539	p.N849fs	1.000	NULL	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK2	HGNC	ENSG00000164418	tier1			24	0	0.00	26	9	25.71
GRIK5	0	genome.wustl.edu	37	19	42509894	42509894	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	42509894	42509894	G	A	SNP	GRIK5	ENST00000301218	human	ensembl	74_37	-1	known	silent	c.2244	p.Y748	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK5	HGNC	ENSG00000105737				49	0	0.00	34	4	10.53
GRIN2B	0	genome.wustl.edu	37	12	13764669	13764669	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	13764669	13764669	A	G	SNP	GRIN2B	ENST00000609686	human	ensembl	74_37	-1	known	silent	c.1770	p.A590	0.915	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2B	HGNC	ENSG00000273079	tier1	-	-	50	0	0.00	28	6	17.65
GRIN2C	0	genome.wustl.edu	37	17	72850835	72850835	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	72850835	72850835	T	C	SNP	GRIN2C	ENST00000293190	human	ensembl	74_37	-1	known	missense	c.397	p.K133E	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,pfam_NMDAR2_C,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2C	HGNC	ENSG00000161509	tier1	-	-	60	0	0.00	52	5	8.77
GRIN3A	0	genome.wustl.edu	37	9	104390676	104390676	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	104390676	104390676	T	C	SNP	GRIN3A	ENST00000361820	human	ensembl	74_37	-1	known	missense	c.2360	p.H787R	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Glu_rcpt_Glu/Gly-bd,smart_Iontro_glu_rcpt,prints_NMDA_rcpt	-	no_errors	GRIN3A	HGNC	ENSG00000198785	tier1	-	-	47	0	0.00	48	8	14.29
GRM1	0	genome.wustl.edu	37	6	146720324	146720324	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	146720324	146720324	C	A	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.2149	p.Q717K	1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822	tier1	-	-	63	0	0.00	25	17	40.48
GRM2	0	genome.wustl.edu	37	3	51749122	51749122	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	51749122	51749122	C	T	SNP	GRM2	ENST00000395052	human	ensembl	74_37	+1	known	missense	c.1333	p.R445C	0.997	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM2	HGNC	ENSG00000164082	tier1	-	-	80	0	0.00	45	6	11.76
GRM4	0	genome.wustl.edu	37	6	34059793	34059793	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	34059793	34059793	C	T	SNP	GRM4	ENST00000374181	human	ensembl	74_37	-1	known	silent	c.603	p.S201	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3,prints_GPCR_3_GABA_rcpt_B	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_4,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM4	HGNC	ENSG00000124493	tier1	-	-	24	0	0.00	28	11	28.21
GSDMA	0	genome.wustl.edu	37	17	38133236	38133236	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	38133236	38133236	C	-	DEL	GSDMA	ENST00000301659	human	ensembl	74_37	+1	known	frame_shift_del	c.1263	p.P422fs	0.997	NULL	pfam_Gasdermin	-	no_errors	GSDMA	HGNC	ENSG00000167914	tier1			70	0	0.00	55	14	20.29
GSN-AS1	0	genome.wustl.edu	37	9	124044851	124044851	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	124044851	124044851	C	T	SNP	GSN-AS1	ENST00000414544	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GSN-AS1	HGNC	ENSG00000235865	tier1	-	-	12	0	0.00	15	5	25.00
GSX2	0	genome.wustl.edu	37	4	54966885	54966885	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	54966885	54966885	C	T	SNP	GSX2	ENST00000326902	human	ensembl	74_37	+1	known	missense	c.374	p.A125V	0.004	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	GSX2	HGNC	ENSG00000180613	tier1	-	-	40	0	0.00	23	8	25.81
GTF2A2	0	genome.wustl.edu	37	15	59931126	59931126	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	59931126	59931126	A	-	DEL	GTF2A2	ENST00000267869	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.976	-	-	-	no_errors	GTF2A2	HGNC	ENSG00000140307	tier1			50	0	0.00	33	6	15.38
GTF2IRD2P1	0	genome.wustl.edu	37	7	72657225	72657225	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	72657225	72657225	G	A	SNP	GTF2IRD2P1	ENST00000425256	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	GTF2IRD2P1	HGNC	ENSG00000214544				57	0	0.00	62	6	8.82
GTF3C1	0	genome.wustl.edu	37	16	27549607	27549607	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	27549607	27549607	C	-	DEL	GTF3C1	ENST00000356183	human	ensembl	74_37	-1	known	frame_shift_del	c.502	p.D168fs	1.000	NULL	pfam_TFIIIC_Bblock-bd	-	no_errors	GTF3C1	HGNC	ENSG00000077235	tier1			37	0	0.00	20	4	16.67
GTF3C2	0	genome.wustl.edu	37	2	27558466	27558466	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	27558466	27558466	T	C	SNP	GTF3C2	ENST00000264720	human	ensembl	74_37	-1	known	silent	c.1575	p.P525	0.996	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	GTF3C2	HGNC	ENSG00000115207	tier1	-	-	36	0	0.00	23	7	23.33
GTPBP2	0	genome.wustl.edu	37	6	43588291	43588292	+	RNA	DEL	TA	TA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	43588291	43588292	TA	-	DEL	GTPBP2	ENST00000476510	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	GTPBP2	HGNC	ENSG00000172432	tier1			32	0	0.00	23	5	17.86
GTSE1	0	genome.wustl.edu	37	22	46711989	46711989	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	46711989	46711989	G	T	SNP	GTSE1	ENST00000454366	human	ensembl	74_37	+1	known	missense	c.1112	p.S371I	0.117	NULL	NULL	-	no_errors	GTSE1	HGNC	ENSG00000075218	tier1	-	-	58	0	0.00	57	4	6.56
GUCY2C	0	genome.wustl.edu	37	12	14825857	14825857	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	14825857	14825857	C	-	DEL	GUCY2C	ENST00000261170	human	ensembl	74_37	-1	known	frame_shift_del	c.1120	p.D374fs	0.958	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_A/G_cyclase,superfamily_Peripla_BP_I,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_A/G_cyclase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	GUCY2C	HGNC	ENSG00000070019	tier1			55	0	0.00	39	13	25.00
GUF1	0	genome.wustl.edu	37	4	44700615	44700615	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	44700615	44700615	A	-	DEL	GUF1	ENST00000281543	human	ensembl	74_37	+1	known	frame_shift_del	c.1927	p.K645fs	0.999	pfam_LepA_GTP-bd_C,tigrfam_EF-4	pfam_EF_GTP-bd_dom,pfam_LepA_GTP-bd_C,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,pfam_Small_GTPase,superfamily_P-loop_NTPase,superfamily_EFG_III-V,superfamily_Transl_B-barrel,prints_EF_GTP-bd_dom,tigrfam_EF-4,tigrfam_Small_GTP-bd_dom	-	no_errors	GUF1	HGNC	ENSG00000151806	tier1			43	0	0.00	30	9	23.08
GUSB	0	genome.wustl.edu	37	7	65439350	65439350	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	65439350	65439350	G	A	SNP	GUSB	ENST00000304895	human	ensembl	74_37	-1	known	silent	c.1323	p.P441	0.044	pfam_Glyco_hydro_2_TIM,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_2	pfam_Glyco_hydro_2_TIM,pfam_Glyco_hydro_2_N,pfam_Glyco_hydro_2_Ig-like,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,superfamily_Glyco_hydro_2_Ig-like,prints_Glyco_hydro_2	-	no_errors	GUSB	HGNC	ENSG00000169919	tier1	-	-	56	0	0.00	32	9	21.95
GYLTL1B	0	genome.wustl.edu	37	11	45948373	45948373	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	45948373	45948373	C	-	DEL	GYLTL1B	ENST00000325468	human	ensembl	74_37	+1	known	frame_shift_del	c.1276	p.R428fs	0.023	NULL	pfam_Glyco_trans_8	-	no_errors	GYLTL1B	HGNC	ENSG00000165905	tier1			47	0	0.00	49	11	18.33
HAS3	0	genome.wustl.edu	37	16	69152342	69152342	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	69152342	69152342	C	T	SNP	HAS3	ENST00000219322	human	ensembl	74_37	+1	known	missense	c.823	p.R275C	0.000	NULL	NULL	-	no_errors	HAS3	HGNC	ENSG00000103044	tier1	-	-	72	0	0.00	42	15	26.32
HAUS3	0	genome.wustl.edu	37	4	2242634	2242634	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	2242634	2242634	T	-	DEL	HAUS3	ENST00000243706	human	ensembl	74_37	-1	known	frame_shift_del	c.40	p.I14fs	1.000	NULL	NULL	-	no_errors	HAUS3	HGNC	ENSG00000214367	tier1			44	0	0.00	38	6	13.64
HCFC1	0	genome.wustl.edu	37	X	153220903	153220903	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	153220903	153220903	C	T	SNP	HCFC1	ENST00000310441	human	ensembl	74_37	-1	known	missense	c.2947	p.A983T	1.000	NULL	pfam_Kelch_2,pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	HCFC1	HGNC	ENSG00000172534				44	0	0.00	33	3	8.33
HCFC2	0	genome.wustl.edu	37	12	104474575	104474575	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	104474575	104474575	G	A	SNP	HCFC2	ENST00000229330	human	ensembl	74_37	+1	known	missense	c.734	p.R245Q	1.000	pfam_Kelch_1	pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	HCFC2	HGNC	ENSG00000111727	tier1	-	-	82	0	0.00	63	16	20.25
HCFC2	0	genome.wustl.edu	37	12	104495909	104495909	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	104495909	104495909	C	A	SNP	HCFC2	ENST00000229330	human	ensembl	74_37	+1	known	missense	c.2042	p.P681H	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Kelch_1,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	HCFC2	HGNC	ENSG00000111727	tier1	-	-	49	0	0.00	40	8	16.67
HCG9	0	genome.wustl.edu	37	6	29942912	29942912	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	29942912	29942912	C	T	SNP	HCG9	ENST00000376800	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HCG9	HGNC	ENSG00000204625	tier1	-	-	34	0	0.00	22	10	31.25
HCN4	0	genome.wustl.edu	37	15	73615063	73615063	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	73615063	73615063	C	-	DEL	HCN4	ENST00000261917	human	ensembl	74_37	-1	known	frame_shift_del	c.3371	p.G1124fs	0.564	NULL	pfam_Ion_trans_N,pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,pfscan_cNMP-bd_dom	-	no_errors	HCN4	HGNC	ENSG00000138622	tier1			10	0	0.00	9	7	43.75
HCRTR2	0	genome.wustl.edu	37	6	55145211	55145211	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	55145211	55145211	T	C	SNP	HCRTR2	ENST00000370862	human	ensembl	74_37	+1	known	silent	c.1074	p.A358	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_Orexin_rcpt_2,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Orexin_rcpt,prints_GPCR_Rhodpsn,prints_Orexin_rcpt_2,prints_NPY_rcpt	-	no_errors	HCRTR2	HGNC	ENSG00000137252	tier1	-	-	40	0	0.00	67	12	15.19
HDAC11	0	genome.wustl.edu	37	3	13546120	13546120	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	13546120	13546120	T	C	SNP	HDAC11	ENST00000295757	human	ensembl	74_37	+1	known	silent	c.981	p.P327	0.000	NULL	pfam_His_deacetylse_dom,prints_His_deacetylse	-	no_errors	HDAC11	HGNC	ENSG00000163517				62	0	0.00	43	5	10.42
HDAC3	0	genome.wustl.edu	37	5	141005623	141005623	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	141005623	141005623	C	T	SNP	HDAC3	ENST00000305264	human	ensembl	74_37	-1	known	silent	c.936	p.S312	0.009	pfam_His_deacetylse_dom,pirsf_His_deacetylse_1	pfam_His_deacetylse_dom,pirsf_His_deacetylse_1,prints_His_deacetylse_1,prints_His_deacetylse	-	no_errors	HDAC3	HGNC	ENSG00000171720				18	0	0.00	26	5	16.13
HDC	0	genome.wustl.edu	37	15	50540459	50540459	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	50540459	50540459	G	T	SNP	HDC	ENST00000267845	human	ensembl	74_37	-1	known	missense	c.1123	p.Q375K	1.000	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase	pfam_PyrdxlP-dep_de-COase,superfamily_PyrdxlP-dep_Trfase,prints_Aromatic_deC	-	no_errors	HDC	HGNC	ENSG00000140287				21	0	0.00	21	2	8.70
HDLBP	0	genome.wustl.edu	37	2	242195709	242195709	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	242195709	242195709	G	A	SNP	HDLBP	ENST00000310931	human	ensembl	74_37	-1	known	missense	c.763	p.R255C	0.966	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	HDLBP	HGNC	ENSG00000115677	tier1	-	-	53	0	0.00	42	5	10.64
HDX	0	genome.wustl.edu	37	X	83616578	83616578	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	83616578	83616578	G	T	SNP	HDX	ENST00000297977	human	ensembl	74_37	-1	known	missense	c.1348	p.L450I	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HDX	HGNC	ENSG00000165259	tier1	-	-	78	0	0.00	34	12	26.09
HEATR2	0	genome.wustl.edu	37	7	769437	769437	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	769437	769437	G	A	SNP	HEATR2	ENST00000297440	human	ensembl	74_37	+1	known	missense	c.733	p.D245N	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	HEATR2	HGNC	ENSG00000164818				71	0	0.00	44	4	8.33
HECW1	0	genome.wustl.edu	37	7	43484922	43484922	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	43484922	43484922	G	A	SNP	HECW1	ENST00000395891	human	ensembl	74_37	+1	known	silent	c.2151	p.T717	0.986	NULL	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	HECW1	HGNC	ENSG00000002746	tier1	-	-	35	0	0.00	24	11	31.43
HELQ	0	genome.wustl.edu	37	4	84374915	84374915	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	84374915	84374915	T	C	SNP	HELQ	ENST00000295488	human	ensembl	74_37	-1	known	missense	c.481	p.T161A	0.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_DNA_repair_Rad51/TF_NusA_a-hlx,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	HELQ	HGNC	ENSG00000163312	tier1	-	-	57	0	0.00	82	11	11.83
HELZ2	0	genome.wustl.edu	37	20	62194213	62194213	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	62194213	62194213	G	A	SNP	HELZ2	ENST00000467148	human	ensembl	74_37	-1	known	missense	c.5962	p.R1988C	0.003	NULL	superfamily_P-loop_NTPase	-	no_errors	HELZ2	HGNC	ENSG00000130589	tier1	-	-	34	0	0.00	32	6	15.79
HERC2P2	0	genome.wustl.edu	37	15	23330372	23330372	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	23330372	23330372	A	G	SNP	HERC2P2	ENST00000560464	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	HERC2P2	HGNC	ENSG00000140181	tier1	-	-	184	0	0.00	152	37	19.58
HERC4	0	genome.wustl.edu	37	10	69716603	69716604	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	69716603	69716604	AA	-	DEL	HERC4	ENST00000480158	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	HERC4	HGNC	ENSG00000148634	tier1			33	0	0.00	33	5	13.16
HEY1	0	genome.wustl.edu	37	8	80677294	80677294	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	80677294	80677294	A	-	DEL	HEY1	ENST00000435063	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.976	-	-	-	no_errors	HEY1	HGNC	ENSG00000164683	tier1			10	0	0.00	3	5	62.50
HEYL	0	genome.wustl.edu	37	1	40092236	40092236	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	40092236	40092236	C	T	SNP	HEYL	ENST00000372852	human	ensembl	74_37	-1	known	silent	c.930	p.A310	0.000	NULL	pfam_bHLH_dom,pfam_Orange,superfamily_bHLH_dom,smart_bHLH_dom,smart_Orange_subgr,pfscan_Orange,pfscan_bHLH_dom	-	no_errors	HEYL	HGNC	ENSG00000163909	tier1	-	-	82	0	0.00	57	21	26.92
HFM1	0	genome.wustl.edu	37	1	91794442	91794442	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	91794442	91794442	G	T	SNP	HFM1	ENST00000497520	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HFM1	HGNC	ENSG00000162669	tier1	-	-	10	0	0.00	11	6	35.29
HHIPL1	0	genome.wustl.edu	37	14	100118894	100118894	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	100118894	100118894	G	A	SNP	HHIPL1	ENST00000330710	human	ensembl	74_37	+1	known	missense	c.589	p.V197M	1.000	superfamily_Quinoprot_gluc/sorb_DH	pfam_SRCR,pfam_Folate_rcpt-like,pfam_Glc/Sorbosone_DH,superfamily_Srcr_rcpt-rel,superfamily_Quinoprot_gluc/sorb_DH,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	HHIPL1	HGNC	ENSG00000182218	tier1	rs145984890	-	49	0	0.00	23	13	36.11
HIATL1	0	genome.wustl.edu	37	9	97203357	97203357	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	97203357	97203357	C	T	SNP	HIATL1	ENST00000375344	human	ensembl	74_37	+1	known	silent	c.486	p.H162	0.524	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Tet-R_TetA/multi-R_MdtG	-	no_errors	HIATL1	HGNC	ENSG00000148110	tier1	-	-	60	0	0.00	39	18	31.58
HIPK3	0	genome.wustl.edu	37	11	33308839	33308839	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	33308839	33308839	C	A	SNP	HIPK3	ENST00000303296	human	ensembl	74_37	+1	known	silent	c.879	p.P293	0.930	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	HIPK3	HGNC	ENSG00000110422	tier1	-	-	32	0	0.00	25	4	13.79
HJURP	0	genome.wustl.edu	37	2	234750242	234750242	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	234750242	234750242	G	A	SNP	HJURP	ENST00000411486	human	ensembl	74_37	-1	known	missense	c.1184	p.T395I	0.000	NULL	pfam_HJURP,pfam_HJURP_C,pfam_Centromere_Scm3_N	-	no_errors	HJURP	HGNC	ENSG00000123485	tier1	-	-	35	0	0.00	33	7	17.50
HLA-C	0	genome.wustl.edu	37	6	31239045	31239045	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	31239045	31239045	A	G	SNP	HLA-C	ENST00000383329	human	ensembl	74_37	-1	known	missense	c.424	p.Y142H	0.882	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog,prints_MHC_I_a	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-C	HGNC	ENSG00000204525	tier1	-	-	78	0	0.00	44	9	16.98
HLA-C	0	genome.wustl.edu	37	6	31239628	31239628	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	31239628	31239628	A	G	SNP	HLA-C	ENST00000383329	human	ensembl	74_37	-1	known	missense	c.91	p.Y31H	0.622	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,pfam_MHC_I_a_C,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom,prints_MHC_I_a	-	no_errors	HLA-C	HGNC	ENSG00000204525	tier1	-	-	89	0	0.00	81	13	13.83
HMCN1	0	genome.wustl.edu	37	1	185891603	185891604	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	185891603	185891604	-	A	INS	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	frame_shift_ins	c.993_994	p.T333fs	1.000:1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1			61	0	0.00	37	9	19.57
HMCN1	0	genome.wustl.edu	37	1	185951461	185951461	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	185951461	185951461	C	A	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	silent	c.2730	p.P910	0.998	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	69	0	0.00	73	14	16.09
HMGB1P5	0	genome.wustl.edu	37	3	22424293	22424293	+	RNA	SNP	C	C	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	22424293	22424293	C	G	SNP	HMGB1P5	ENST00000451497	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	HMGB1P5	HGNC	ENSG00000132967				16	0	0.00	22	3	12.00
HMGB3	0	genome.wustl.edu	37	X	150155677	150155677	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	150155677	150155677	G	A	SNP	HMGB3	ENST00000325307	human	ensembl	74_37	+1	known	missense	c.367	p.V123M	0.998	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	HMGB3	HGNC	ENSG00000029993	tier1	-	-	84	0	0.00	17	21	55.26
HMGN3	0	genome.wustl.edu	37	6	79912054	79912054	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	79912054	79912054	T	C	SNP	HMGN3	ENST00000344726	human	ensembl	74_37	-1	known	missense	c.200	p.K67R	1.000	pfam_HMGN_fam,smart_HMGN_fam	pfam_HMGN_fam,smart_HMGN_fam,prints_HMGN_fam	-	no_errors	HMGN3	HGNC	ENSG00000118418	tier1	-	-	51	0	0.00	37	6	13.95
HMHA1	0	genome.wustl.edu	37	19	1073742	1073742	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	1073742	1073742	C	T	SNP	HMHA1	ENST00000313093	human	ensembl	74_37	+1	known	silent	c.720	p.S240	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448	tier1	-	-	87	0	0.00	61	26	29.89
HNF1A	0	genome.wustl.edu	37	12	121432118	121432118	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	121432118	121432118	C	-	DEL	HNF1A	ENST00000257555	human	ensembl	74_37	+1	known	frame_shift_del	c.865	p.P291fs	1.000	pfam_HNF1b_C	pfam_HNF1b_C,pfam_HNF-1_N,pfam_HNF1a_C,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_HNF1_dimer_dom,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HNF1A	HGNC	ENSG00000135100	tier1			37	0	0.00	30	5	14.29
HNRNPD	0	genome.wustl.edu	37	4	83276431	83276431	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	83276431	83276431	A	-	DEL	HNRNPD	ENST00000508119	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HNRNPD	HGNC	ENSG00000138668	tier1			79	0	0.00	41	7	14.58
HNRNPL	0	genome.wustl.edu	37	19	39330959	39330959	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	39330959	39330959	G	-	DEL	HNRNPL	ENST00000221419	human	ensembl	74_37	-1	known	frame_shift_del	c.1010	p.P337fs	1.000	tigrfam_HnRNP-L_PTB	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP-L_PTB	-	no_errors	HNRNPL	HGNC	ENSG00000104824	tier1			54	0	0.00	40	13	24.53
HOMEZ	0	genome.wustl.edu	37	14	23746015	23746018	+	Frame_Shift_Del	DEL	AAAG	AAAG	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AAAG	AAAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	23746015	23746018	AAAG	-	DEL	HOMEZ	ENST00000431326	human	ensembl	74_37	-1	known	frame_shift_del	c.428_425	p.S142fs	0.996:0.996:0.999:1.000	NULL	superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HOMEZ	HGNC	ENSG00000215271	tier1			45	0	0.00	35	10	22.22
HOMEZ	0	genome.wustl.edu	37	14	23746069	23746069	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	23746069	23746069	C	T	SNP	HOMEZ	ENST00000431326	human	ensembl	74_37	-1	known	missense	c.374	p.R125Q	1.000	NULL	superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HOMEZ	HGNC	ENSG00000215271	tier1	-	-	61	0	0.00	37	16	30.19
HOPX	0	genome.wustl.edu	37	4	57522048	57522048	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	57522048	57522048	G	T	SNP	HOPX	ENST00000554144	human	ensembl	74_37	-1	known	missense	c.173	p.A58E	0.966	superfamily_Homeodomain-like	superfamily_Homeodomain-like	-	no_errors	HOPX	HGNC	ENSG00000171476	tier1	-	-	53	0	0.00	43	4	8.33
HOXA9	0	genome.wustl.edu	37	7	27202966	27202966	+	RNA	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	27202966	27202966	C	-	DEL	HOXA9	ENST00000487384	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	HOXA9	HGNC	ENSG00000078399	tier1			55	0	0.00	29	14	32.56
HOXA9	0	genome.wustl.edu	37	7	27204776	27204776	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	27204776	27204776	C	G	SNP	HOXA9	ENST00000343483	human	ensembl	74_37	-1	known	missense	c.301	p.A101P	1.000	pfam_Hox9_activation_N,pirsf_Homeobox_Hox9	pfam_Hox9_activation_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Hox9,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXA9	HGNC	ENSG00000078399				33	0	0.00	31	4	11.43
HOXC9	0	genome.wustl.edu	37	12	54394172	54394172	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	54394172	54394172	C	T	SNP	HOXC9	ENST00000303450	human	ensembl	74_37	+1	known	missense	c.200	p.A67V	1.000	pfam_Hox9_activation_N,pirsf_Homeobox_Hox9	pfam_Hox9_activation_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Hox9,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXC9	HGNC	ENSG00000180806	tier1	-	-	55	0	0.00	37	7	15.91
HOXD8	0	genome.wustl.edu	37	2	176996151	176996151	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	176996151	176996151	C	T	SNP	HOXD8	ENST00000313173	human	ensembl	74_37	+1	known	silent	c.684	p.I228	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	HOXD8	HGNC	ENSG00000175879	tier1	-	-	40	0	0.00	48	9	15.79
HPS6	0	genome.wustl.edu	37	10	103826900	103826900	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	103826900	103826900	C	-	DEL	HPS6	ENST00000299238	human	ensembl	74_37	+1	known	frame_shift_del	c.1669	p.N559fs	0.013	pirsf_BLOC-2_complex_Hps6_subunit	pirsf_BLOC-2_complex_Hps6_subunit	-	no_errors	HPS6	HGNC	ENSG00000166189	tier1			84	0	0.00	42	16	27.59
HPX	0	genome.wustl.edu	37	11	6452975	6452975	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	6452975	6452975	G	A	SNP	HPX	ENST00000265983	human	ensembl	74_37	-1	known	missense	c.1025	p.P342L	1.000	pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat,pirsf_Hemopexin_chordata	pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat,pirsf_Hemopexin_chordata	-	no_errors	HPX	HGNC	ENSG00000110169	tier1	-	-	43	0	0.00	26	8	23.53
HR	0	genome.wustl.edu	37	8	21984704	21984704	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	21984704	21984704	G	A	SNP	HR	ENST00000381418	human	ensembl	74_37	-1	known	silent	c.1251	p.P417	0.192	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	HR	HGNC	ENSG00000168453	tier1	rs146491425	-	41	0	0.00	54	8	12.90
HRC	0	genome.wustl.edu	37	19	49657665	49657665	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	49657665	49657665	C	A	SNP	HRC	ENST00000252825	human	ensembl	74_37	-1	known	missense	c.830	p.G277V	0.000	pfam_Hist_rich_Ca-bd	pfam_Hist_rich_Ca-bd	-	no_errors	HRC	HGNC	ENSG00000130528	tier1	-	-	59	0	0.00	40	20	33.33
HS3ST4	0	genome.wustl.edu	37	16	25703777	25703777	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	25703777	25703777	G	A	SNP	HS3ST4	ENST00000331351	human	ensembl	74_37	+1	known	silent	c.39	p.P13	1.000	NULL	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	HS3ST4	HGNC	ENSG00000182601				19	0	0.00	11	3	21.43
HS6ST2	0	genome.wustl.edu	37	X	131762903	131762903	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	131762903	131762903	C	T	SNP	HS6ST2	ENST00000521489	human	ensembl	74_37	-1	known	missense	c.1286	p.R429H	1.000	pfam_Sulfotransferase,superfamily_P-loop_NTPase	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	HS6ST2	HGNC	ENSG00000171004	tier1	-	-	78	0	0.00	38	11	22.45
HS6ST2	0	genome.wustl.edu	37	X	132092616	132092616	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	132092616	132092616	C	T	SNP	HS6ST2	ENST00000521489	human	ensembl	74_37	-1	known	silent	c.15	p.A5	1.000	NULL	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	HS6ST2	HGNC	ENSG00000171004	tier1	-	-	43	0	0.00	14	5	26.32
HSF1	0	genome.wustl.edu	37	8	145533057	145533057	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	145533057	145533057	A	G	SNP	HSF1	ENST00000528199	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HSF1	HGNC	ENSG00000185122	tier1	-	-	47	0	0.00	40	23	36.51
HSP90AA1	0	genome.wustl.edu	37	14	102550810	102550810	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	102550810	102550810	T	-	DEL	HSP90AA1	ENST00000334701	human	ensembl	74_37	-1	known	frame_shift_del	c.1439	p.K480fs	1.000	pirsf_Hsp90_fam,pfam_Hsp90_fam,superfamily_Ribosomal_S5_D2-typ_fold	pirsf_Hsp90_fam,pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,prints_Hsp90_N	-	no_errors	HSP90AA1	HGNC	ENSG00000080824	tier1			62	0	0.00	27	12	30.77
HSP90AA4P	0	genome.wustl.edu	37	4	190395839	190395839	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	190395839	190395839	A	-	DEL	HSP90AA4P	ENST00000378770	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HSP90AA4P	HGNC	ENSG00000205100	tier1			59	0	0.00	46	12	20.69
HSPA12B	0	genome.wustl.edu	37	20	3731495	3731496	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	3731495	3731496	-	T	INS	HSPA12B	ENST00000254963	human	ensembl	74_37	+1	known	frame_shift_ins	c.1346_1347	p.C450fs	0.999:0.346	NULL	NULL	-	no_errors	HSPA12B	HGNC	ENSG00000132622	tier1			17	0	0.00	14	10	41.67
HSPA9	0	genome.wustl.edu	37	5	137909470	137909471	+	In_Frame_Ins	INS	-	-	GTT			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	137909470	137909471	-	GTT	INS	HSPA9	ENST00000297185	human	ensembl	74_37	-1	known	in_frame_ins	c.210_209	p.M70in_frame_insIT	1.000:1.000	pfam_Hsp_70_fam,tigrfam_Chaperone_DnaK	pfam_Hsp_70_fam,pfam_MreB_Mrl,pfam_Carb_kinase_FGGY_C,prints_Hsp_70_fam,tigrfam_Chaperone_DnaK	-	no_errors	HSPA9	HGNC	ENSG00000113013	tier1			33	0	0.00	38	6	13.64
HSPB7	0	genome.wustl.edu	37	1	16345792	16345792	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	16345792	16345792	C	T	SNP	HSPB7	ENST00000375718	human	ensembl	74_37	-1	novel	missense	c.173	p.S58N	0.003	NULL	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	-	no_errors	HSPB7	HGNC	ENSG00000173641				46	0	0.00	42	5	10.64
HSPD1P6	0	genome.wustl.edu	37	3	36810381	36810382	+	RNA	DEL	TT	TT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	36810381	36810382	TT	-	DEL	HSPD1P6	ENST00000424886	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.040:0.025	-	-	-	no_errors	HSPD1P6	HGNC	ENSG00000230067	tier1			9	0	0.00	3	7	70.00
HSPG2	0	genome.wustl.edu	37	1	22161279	22161279	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	22161279	22161279	C	T	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.10613	p.G3538D	0.937	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798	tier1	-	-	42	0	0.00	29	5	14.71
HSPG2	0	genome.wustl.edu	37	1	22205107	22205107	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	22205107	22205107	C	T	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	missense	c.2521	p.A841T	0.910	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798	tier1	-	-	108	0	0.00	60	35	36.84
HSPH1	0	genome.wustl.edu	37	13	31729669	31729670	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	31729669	31729670	-	T	INS	HSPH1	ENST00000445273	human	ensembl	74_37	-1	known	frame_shift_ins	c.294_293	p.N98fs	1.000:1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPH1	HGNC	ENSG00000120694	tier1			42	0	0.00	32	10	23.81
HTRA2	0	genome.wustl.edu	37	2	74757418	74757418	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	74757418	74757418	C	A	SNP	HTRA2	ENST00000258080	human	ensembl	74_37	+1	known	silent	c.285	p.A95	0.006	NULL	pfam_Peptidase_S1,pfam_PDZ,superfamily_Trypsin-like_Pept_dom,superfamily_PDZ,smart_PDZ,pfscan_PDZ,prints_Peptidase_S1C	-	no_errors	HTRA2	HGNC	ENSG00000115317	tier1	-	-	55	0	0.00	44	7	13.73
HUWE1	0	genome.wustl.edu	37	X	53570860	53570860	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	53570860	53570860	G	A	SNP	HUWE1	ENST00000262854	human	ensembl	74_37	-1	known	missense	c.11321	p.A3774V	1.000	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/Ts_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758	tier1	-	-	27	0	0.00	18	5	21.74
HUWE1	0	genome.wustl.edu	37	X	53600796	53600796	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	53600796	53600796	C	T	SNP	HUWE1	ENST00000262854	human	ensembl	74_37	-1	known	missense	c.6226	p.A2076T	1.000	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/Ts_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758				88	0	0.00	71	5	6.49
IARS	0	genome.wustl.edu	37	9	95003101	95003101	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	95003101	95003101	A	-	DEL	IARS	ENST00000473915	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	IARS	HGNC	ENSG00000196305	tier1			83	0	0.00	50	9	15.25
IARS	0	genome.wustl.edu	37	9	95009783	95009783	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	95009783	95009783	G	T	SNP	IARS	ENST00000375643	human	ensembl	74_37	-1	known	silent	c.2667	p.G889	0.913	superfamily_tRNAsynth_1a_anticodon-bd	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,prints_Ile-tRNA-ligase,tigrfam_Ile-tRNA-ligase	-	no_errors	IARS	HGNC	ENSG00000196305	tier1	-	-	48	0	0.00	46	9	16.36
IBTK	0	genome.wustl.edu	37	6	82935221	82935221	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	82935221	82935221	C	A	SNP	IBTK	ENST00000306270	human	ensembl	74_37	-1	known	silent	c.798	p.P266	1.000	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,pfam_BTB_POZ,pfam_Ankyrin_rpt,superfamily_RCC1/BLIP-II,superfamily_BTB/POZ_fold,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_BTB/POZ-like,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like,pfscan_Reg_chr_condens	-	no_errors	IBTK	HGNC	ENSG00000005700	tier1	-	-	75	0	0.00	59	13	18.06
IDI2	0	genome.wustl.edu	37	10	1070564	1070564	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	1070564	1070564	C	T	SNP	IDI2	ENST00000277517	human	ensembl	74_37	-1	known	missense	c.100	p.D34N	0.946	superfamily_NUDIX_hydrolase_dom-like,pirsf_IsopentenylPP_isomerase_typ1,tigrfam_IsopentenylPP_isomerase_typ1	pfam_NUDIX_hydrolase_dom,superfamily_NUDIX_hydrolase_dom-like,pirsf_IsopentenylPP_isomerase_typ1,tigrfam_IsopentenylPP_isomerase_typ1	-	no_errors	IDI2	HGNC	ENSG00000148377	tier1	-	-	58	0	0.00	36	5	12.20
IFI35	0	genome.wustl.edu	37	17	41158875	41158875	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	41158875	41158875	G	-	DEL	IFI35	ENST00000536969	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IFI35	HGNC	ENSG00000068079	tier1			34	0	0.00	29	9	23.68
IFNG	0	genome.wustl.edu	37	12	68553363	68553363	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	68553363	68553363	C	A	SNP	IFNG	ENST00000229135	human	ensembl	74_37	-1	known	missense	c.33	p.Q11H	0.730	pirsf_Interferon_gamma	pfam_Interferon_gamma,superfamily_4_helix_cytokine-like_core,pirsf_Interferon_gamma	-	no_errors	IFNG	HGNC	ENSG00000111537	tier1	-	-	76	0	0.00	32	23	41.82
IGFALS	0	genome.wustl.edu	37	16	1840901	1840901	+	Silent	SNP	C	C	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	1840901	1840901	C	G	SNP	IGFALS	ENST00000415638	human	ensembl	74_37	-1	known	silent	c.1632	p.G544	0.026	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	IGFALS	HGNC	ENSG00000099769	tier1	-	-	145	0	0.00	105	22	17.32
IGSF10	0	genome.wustl.edu	37	3	151155309	151155310	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	151155309	151155310	-	T	INS	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	frame_shift_ins	c.7040_7039	p.I2347fs	0.004:0.002	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580	tier1			9	0	0.00	15	5	25.00
IGSF9B	0	genome.wustl.edu	37	11	133790828	133790828	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	133790828	133790828	C	T	SNP	IGSF9B	ENST00000321016	human	ensembl	74_37	-1	known	missense	c.2792	p.R931Q	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF9B	HGNC	ENSG00000080854	tier1	-	-	83	0	0.00	54	13	19.40
IGSF9B	0	genome.wustl.edu	37	11	133802093	133802093	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	133802093	133802093	A	G	SNP	IGSF9B	ENST00000321016	human	ensembl	74_37	-1	known	missense	c.983	p.L328P	1.000	pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGSF9B	HGNC	ENSG00000080854				17	0	0.00	18	3	14.29
IKZF1	0	genome.wustl.edu	37	7	50455091	50455091	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	50455091	50455091	G	A	SNP	IKZF1	ENST00000331340	human	ensembl	74_37	+1	known	missense	c.638	p.R213Q	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF1	HGNC	ENSG00000185811	tier1	-	-	55	0	0.00	29	9	23.68
IL17B	0	genome.wustl.edu	37	5	148754055	148754055	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	148754055	148754055	G	A	SNP	IL17B	ENST00000261796	human	ensembl	74_37	-1	known	silent	c.420	p.S140	1.000	pfam_IL-17_fam	pfam_IL-17_fam,prints_IL-17_chr	-	no_errors	IL17B	HGNC	ENSG00000127743	tier1	-	-	37	0	0.00	23	9	28.12
IL18R1	0	genome.wustl.edu	37	2	102988513	102988513	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	102988513	102988513	T	A	SNP	IL18R1	ENST00000233957	human	ensembl	74_37	+1	known	missense	c.403	p.F135I	0.000	smart_Ig_sub	pfam_TIR_dom,superfamily_TIR_dom,smart_Ig_sub,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom,prints_IL-1_rcpt_I/II-typ	-	no_errors	IL18R1	HGNC	ENSG00000115604	tier1	-	-	66	0	0.00	35	15	29.41
IL6	0	genome.wustl.edu	37	7	22767197	22767197	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	22767197	22767197	C	T	SNP	IL6	ENST00000420258	human	ensembl	74_37	+1	known	nonsense	c.316	p.R106*	0.000	superfamily_4_helix_cytokine-like_core	pfam_IL-6/IL-23/GCSF/MGF,superfamily_4_helix_cytokine-like_core,smart_IL-6/IL-23/GCSF/MGF,prints_IL-6,prints_IL-6/IL-23/GCSF/MGF	-	no_errors	IL6	HGNC	ENSG00000136244	tier1	-	-	67	0	0.00	41	19	31.67
ILF3	0	genome.wustl.edu	37	19	10789292	10789292	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	10789292	10789292	C	T	SNP	ILF3	ENST00000449870	human	ensembl	74_37	+1	known	missense	c.563	p.T188M	1.000	pfam_DZF,smart_DZF	pfam_DZF,pfam_dsRNA-bd_dom,smart_DZF,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	-	no_errors	ILF3	HGNC	ENSG00000129351	tier1	-	-	41	0	0.00	19	15	44.12
IMMP2L	0	genome.wustl.edu	37	7	110303715	110303715	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	110303715	110303715	C	T	SNP	IMMP2L	ENST00000331762	human	ensembl	74_37	-1	known	silent	c.471	p.Q157	0.998	superfamily_Peptidase_S24_S26A/B/C	pfam_Peptidase_S24_S26,superfamily_Peptidase_S24_S26A/B/C,prints_Pept_S26A_signal_pept_1,tigrfam_Pept_S26A_signal_pept_1	-	no_errors	IMMP2L	HGNC	ENSG00000184903	tier1	-	-	48	0	0.00	59	4	6.35
INE1	0	genome.wustl.edu	37	X	47065253	47065253	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	47065253	47065253	A	-	DEL	INE1	ENST00000456273	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.098	-	-	-	no_errors	INE1	HGNC	ENSG00000224975	tier1			60	0	0.00	41	9	18.00
ING3	0	genome.wustl.edu	37	7	120606729	120606729	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	120606729	120606729	T	C	SNP	ING3	ENST00000315870	human	ensembl	74_37	+1	known	silent	c.414	p.A138	0.995	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	ING3	HGNC	ENSG00000071243	tier1	-	-	88	0	0.00	71	7	8.97
INO80E	0	genome.wustl.edu	37	16	30016653	30016653	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	30016653	30016653	C	-	DEL	INO80E	ENST00000563197	human	ensembl	74_37	+1	known	frame_shift_del	c.625	p.T212fs	1.000	NULL	NULL	-	no_errors	INO80E	HGNC	ENSG00000169592	tier1			29	0	0.00	16	13	44.83
INPP4B	0	genome.wustl.edu	37	4	143067033	143067033	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	143067033	143067033	C	A	SNP	INPP4B	ENST00000509777	human	ensembl	74_37	-1	known	missense	c.1680	p.K560N	0.327	NULL	superfamily_C2_dom	-	no_errors	INPP4B	HGNC	ENSG00000109452	tier1	-	-	68	0	0.00	80	12	13.04
INPP5F	0	genome.wustl.edu	37	10	121556338	121556339	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	121556338	121556339	-	C	INS	INPP5F	ENST00000361976	human	ensembl	74_37	+1	known	frame_shift_ins	c.781_782	p.Q264fs	1.000:1.000	pfam_Syja_N,pfscan_Syja_N	pfam_Syja_N,pfam_Inositol_phosphatase,pfscan_Syja_N	-	no_errors	INPP5F	HGNC	ENSG00000198825	tier1			69	0	0.00	44	21	32.31
INSRR	0	genome.wustl.edu	37	1	156814636	156814636	+	Splice_Site	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	156814636	156814636	C	A	SNP	INSRR	ENST00000368195	human	ensembl	74_37	-1	known	splice_site	c.2438-1	e13-1	1.000	-	-	-	no_errors	INSRR	HGNC	ENSG00000027644	tier1	-	-	22	0	0.00	8	3	27.27
INSRR	0	genome.wustl.edu	37	1	156814956	156814956	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	156814956	156814956	G	A	SNP	INSRR	ENST00000368195	human	ensembl	74_37	-1	known	silent	c.2349	p.Y783	1.000	pirsf_Tyr_kinase_insulin-like_rcpt,superfamily_Fibronectin_type3,smart_Fibronectin_type3	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	INSRR	HGNC	ENSG00000027644	tier1	-	-	89	0	0.00	53	25	32.05
INTS1	0	genome.wustl.edu	37	7	1533447	1533447	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	1533447	1533447	C	T	SNP	INTS1	ENST00000389470	human	ensembl	74_37	-1	known	missense	c.2395	p.D799N	0.997	NULL	pfam_DUF3677,superfamily_ARM-type_fold	-	no_errors	INTS1	HGNC	ENSG00000164880	tier1	-	-	98	0	0.00	70	13	15.66
INTS4L2	0	genome.wustl.edu	37	7	65171357	65171357	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	65171357	65171357	G	A	SNP	INTS4L2	ENST00000430126	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.963	-	-	-	no_errors	INTS4L2	HGNC	ENSG00000232270	tier1	-	-	48	0	0.00	29	20	40.82
INTS9	0	genome.wustl.edu	37	8	28628531	28628531	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	28628531	28628531	G	A	SNP	INTS9	ENST00000521022	human	ensembl	74_37	-1	known	silent	c.1630	p.L544	1.000	NULL	pfam_Beta_Casp	-	no_errors	INTS9	HGNC	ENSG00000104299	tier1	-	-	50	0	0.00	43	9	16.98
INVS	0	genome.wustl.edu	37	9	102992043	102992043	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	102992043	102992043	G	T	SNP	INVS	ENST00000262457	human	ensembl	74_37	+1	known	missense	c.549	p.K183N	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_IQ_motif_EF-hand-BS,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_IQ_motif_EF-hand-BS,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Ankyrin_rpt	-	no_errors	INVS	HGNC	ENSG00000119509	tier1	-	-	31	0	0.00	30	6	16.67
IP6K3	0	genome.wustl.edu	37	6	33696073	33696073	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	33696073	33696073	G	T	SNP	IP6K3	ENST00000293756	human	ensembl	74_37	-1	known	silent	c.204	p.T68	0.151	NULL	pfam_IPK	-	no_errors	IP6K3	HGNC	ENSG00000161896				31	0	0.00	23	2	8.00
IQGAP2	0	genome.wustl.edu	37	5	75967685	75967685	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	75967685	75967685	G	A	SNP	IQGAP2	ENST00000274364	human	ensembl	74_37	+1	known	missense	c.2945	p.R982H	1.000	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,smart_RasGAP,pfscan_RasGAP	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_CH-domain,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_WW_dom,pfscan_RasGAP	-	no_errors	IQGAP2	HGNC	ENSG00000145703	tier1	-	-	58	0	0.00	37	12	24.49
IQGAP3	0	genome.wustl.edu	37	1	156509223	156509223	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	156509223	156509223	C	T	SNP	IQGAP3	ENST00000361170	human	ensembl	74_37	-1	known	missense	c.2999	p.R1000H	0.997	superfamily_Rho_GTPase_activation_prot,smart_RasGAP,pfscan_RasGAP	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_CH-domain,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_RasGAP	-	no_errors	IQGAP3	HGNC	ENSG00000183856	tier1	rs111494634	-	38	0	0.00	24	4	14.29
IRAK4	0	genome.wustl.edu	37	12	44180243	44180243	+	Silent	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	44180243	44180243	T	A	SNP	IRAK4	ENST00000448290	human	ensembl	74_37	+1	known	silent	c.1230	p.I410	0.968	pirsf_IL-1_rcpt-assoc_kin4,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_IL-1_rcpt-assoc_kin4,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_DEATH-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	IRAK4	HGNC	ENSG00000198001	tier1	-	-	24	0	0.00	28	6	17.65
IREB2	0	genome.wustl.edu	37	15	78762887	78762887	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	78762887	78762887	T	C	SNP	IREB2	ENST00000258886	human	ensembl	74_37	+1	known	silent	c.643	p.L215	1.000	superfamily_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	pfam_Acoase/IPM_deHydtase_lsu_aba,pfam_AconitaseA/IPMdHydase_ssu_swvl,superfamily_Acoase/IPM_deHydtase_lsu_aba,superfamily_Aconitase/3IPM_dehydase_swvl,prints_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	-	no_errors	IREB2	HGNC	ENSG00000136381	tier1	-	-	82	0	0.00	72	7	8.86
IRF4	0	genome.wustl.edu	37	6	401645	401645	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	401645	401645	G	A	SNP	IRF4	ENST00000380956	human	ensembl	74_37	+1	known	missense	c.967	p.G323R	1.000	pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain	pfam_Interferon_reg_factor-3,pfam_Interferon_reg_fact_DNA-bd_dom,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF4	HGNC	ENSG00000137265	tier1	-	-	47	0	0.00	42	4	8.70
IRS4	0	genome.wustl.edu	37	X	107977803	107977803	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	107977803	107977803	C	-	DEL	IRS4	ENST00000372129	human	ensembl	74_37	-1	known	frame_shift_del	c.1772	p.G591fs	0.016	NULL	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1,prints_Insln_rcpt_S1	-	no_errors	IRS4	HGNC	ENSG00000133124	tier1			49	0	0.00	22	3	12.00
IRX4	0	genome.wustl.edu	37	5	1878502	1878502	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	1878502	1878502	C	T	SNP	IRX4	ENST00000231357	human	ensembl	74_37	-1	known	missense	c.1141	p.A381T	0.771	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX4	HGNC	ENSG00000113430	tier1	-	-	28	0	0.00	19	5	20.00
ISG20L2	0	genome.wustl.edu	37	1	156694023	156694023	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	156694023	156694023	G	-	DEL	ISG20L2	ENST00000313146	human	ensembl	74_37	-1	known	frame_shift_del	c.865	p.L289fs	0.997	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	ISG20L2	HGNC	ENSG00000143319	tier1			82	0	0.00	39	23	37.10
ITFG2	0	genome.wustl.edu	37	12	2932038	2932038	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	2932038	2932038	C	T	SNP	ITFG2	ENST00000228799	human	ensembl	74_37	+1	known	missense	c.1027	p.R343C	1.000	superfamily_WD40_repeat_dom	pfam_FG-GAP,superfamily_WD40_repeat_dom	-	no_errors	ITFG2	HGNC	ENSG00000111203	tier1	-	-	64	0	0.00	49	4	7.27
ITGA11	0	genome.wustl.edu	37	15	68695277	68695277	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	68695277	68695277	G	A	SNP	ITGA11	ENST00000315757	human	ensembl	74_37	-1	known	silent	c.144	p.H48	0.996	smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA11	HGNC	ENSG00000137809	tier1	-	-	49	0	0.00	41	7	14.58
ITGA6	0	genome.wustl.edu	37	2	173368930	173368931	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	173368930	173368931	-	A	INS	ITGA6	ENST00000264106	human	ensembl	74_37	+1	known	frame_shift_ins	c.3343_3344	p.Q1118fs	1.000:1.000	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA6	HGNC	ENSG00000091409	tier1			32	0	0.00	31	6	16.22
ITGB2	0	genome.wustl.edu	37	21	46330514	46330514	+	Splice_Site	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	46330514	46330514	C	-	DEL	ITGB2	ENST00000479849	human	ensembl	74_37	-1	putative	splice_site_del	c.NULL	NULL	0.001	-	-	-	no_errors	ITGB2	HGNC	ENSG00000160255	tier1			128	0	0.00	83	34	29.06
ITGB5	0	genome.wustl.edu	37	3	124567295	124567295	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	124567295	124567295	G	A	SNP	ITGB5	ENST00000296181	human	ensembl	74_37	-1	known	missense	c.472	p.R158W	1.000	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,smart_Integrin_bsu_N,smart_VWF_A	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt_dom,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,smart_VWF_A,prints_Integrin_bsu	-	no_errors	ITGB5	HGNC	ENSG00000082781				38	0	0.00	34	2	5.56
ITGBL1	0	genome.wustl.edu	37	13	102220154	102220154	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	102220154	102220154	C	T	SNP	ITGBL1	ENST00000376180	human	ensembl	74_37	+1	known	nonsense	c.421	p.Q141*	1.000	NULL	pfam_EGF_extracell,smart_EG-like_dom	-	no_errors	ITGBL1	HGNC	ENSG00000198542	tier1	-	-	58	0	0.00	45	10	18.18
ITIH2	0	genome.wustl.edu	37	10	7763614	7763614	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	7763614	7763614	G	A	SNP	ITIH2	ENST00000358415	human	ensembl	74_37	+1	known	silent	c.741	p.A247	0.135	NULL	pfam_ITI_HC_C,pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH2	HGNC	ENSG00000151655	tier1	-	-	51	0	0.00	35	9	20.45
ITIH4	0	genome.wustl.edu	37	3	52853933	52853933	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	52853933	52853933	C	-	DEL	ITIH4	ENST00000434759	human	ensembl	74_37	-1	known	frame_shift_del	c.1671	p.R558fs	0.000	NULL	pfam_VWF_A,pfam_VIT,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	ITIH4	HGNC	ENSG00000055955	tier1			62	0	0.00	28	10	26.32
ITLN1	0	genome.wustl.edu	37	1	160849201	160849202	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	160849201	160849202	-	C	INS	ITLN1	ENST00000326245	human	ensembl	74_37	-1	known	frame_shift_ins	c.689_688	p.E230fs	0.193:0.194	superfamily_Fibrinogen_a/b/g_C_dom	superfamily_Fibrinogen_a/b/g_C_dom	-	no_errors	ITLN1	HGNC	ENSG00000179914	tier1			57	0	0.00	41	12	22.64
ITPK1	0	genome.wustl.edu	37	14	93429193	93429193	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	93429193	93429193	G	A	SNP	ITPK1	ENST00000267615	human	ensembl	74_37	-1	known	silent	c.366	p.D122	1.000	pfam_Inositol_tetrakis-P_1-kinase	pfam_Inositol_tetrakis-P_1-kinase	-	no_errors	ITPK1	HGNC	ENSG00000100605	tier1	-	-	45	0	0.00	30	4	11.76
ITPK1-AS1	0	genome.wustl.edu	37	14	93534031	93534031	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	93534031	93534031	T	-	DEL	ITPK1-AS1	ENST00000553639	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ITPK1-AS1	HGNC	ENSG00000258730	tier1			19	0	0.00	8	5	38.46
ITPR1	0	genome.wustl.edu	37	3	4829647	4829647	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	4829647	4829647	G	A	SNP	ITPR1	ENST00000302640	human	ensembl	74_37	+1	known	missense	c.6587	p.R2196Q	1.000	NULL	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR1	HGNC	ENSG00000150995	tier1	-	-	40	0	0.00	25	8	24.24
ITPR3	0	genome.wustl.edu	37	6	33651920	33651920	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	33651920	33651920	T	C	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	missense	c.4912	p.C1638R	1.000	NULL	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433	tier1	-	-	78	0	0.00	50	5	9.09
IVL	0	genome.wustl.edu	37	1	152882397	152882397	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	152882397	152882397	C	-	DEL	IVL	ENST00000368764	human	ensembl	74_37	+1	known	frame_shift_del	c.124	p.P43fs	0.031	pfam_Involucrin_N	pfam_Involucrin_N,pfam_Involucrin_rpt	-	no_errors	IVL	HGNC	ENSG00000163207	tier1			47	0	0.00	35	14	28.57
JAKMIP2	0	genome.wustl.edu	37	5	147023707	147023707	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	147023707	147023707	G	A	SNP	JAKMIP2	ENST00000265272	human	ensembl	74_37	-1	known	missense	c.1138	p.L380F	1.000	NULL	NULL	-	no_errors	JAKMIP2	HGNC	ENSG00000176049	tier1	-	-	62	0	0.00	54	12	18.18
JARID2	0	genome.wustl.edu	37	6	15513159	15513159	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	15513159	15513159	G	A	SNP	JARID2	ENST00000341776	human	ensembl	74_37	+1	known	missense	c.3149	p.R1050H	1.000	NULL	pfam_JmjC_dom,pfam_ARID/BRIGHT_DNA-bd,pfam_TF_JmjN,pfam_Znf_C5HC2,superfamily_ARID/BRIGHT_DNA-bd,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	JARID2	HGNC	ENSG00000008083	tier1	-	-	59	0	0.00	45	10	18.18
JPH3	0	genome.wustl.edu	37	16	87730402	87730402	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	87730402	87730402	C	T	SNP	JPH3	ENST00000537256	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	JPH3	HGNC	ENSG00000154118	tier1	-	-	76	0	0.00	46	9	16.36
JUP	0	genome.wustl.edu	37	17	39925671	39925671	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	39925671	39925671	G	A	SNP	JUP	ENST00000310706	human	ensembl	74_37	-1	known	missense	c.467	p.P156L	1.000	superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,prints_Beta-catenin	-	no_errors	JUP	HGNC	ENSG00000173801	tier1	-	-	68	0	0.00	60	16	21.05
KALRN	0	genome.wustl.edu	37	3	124117635	124117635	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	124117635	124117635	C	T	SNP	KALRN	ENST00000360013	human	ensembl	74_37	+1	known	nonsense	c.2257	p.Q753*	1.000	smart_Spectrin/alpha-actinin	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145	tier1	-	-	48	0	0.00	43	7	14.00
KANK1	0	genome.wustl.edu	37	9	738311	738311	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	738311	738311	C	T	SNP	KANK1	ENST00000382297	human	ensembl	74_37	+1	known	silent	c.3360	p.H1120	0.983	NULL	pfam_Ankyrin_rpt,pfam_KN_motif,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK1	HGNC	ENSG00000107104				74	0	0.00	39	3	7.14
KANK4	0	genome.wustl.edu	37	1	62739570	62739570	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	62739570	62739570	G	A	SNP	KANK4	ENST00000371153	human	ensembl	74_37	-1	known	silent	c.1206	p.N402	0.000	NULL	pfam_KN_motif,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK4	HGNC	ENSG00000132854	tier1	rs142146326	-	82	0	0.00	48	5	9.43
KAT2A	0	genome.wustl.edu	37	17	40265752	40265752	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	40265752	40265752	G	-	DEL	KAT2A	ENST00000225916	human	ensembl	74_37	-1	known	frame_shift_del	c.2429	p.P810fs	1.000	pirsf_Hist_acetylase_PCAF,pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	pirsf_Hist_acetylase_PCAF,pfam_PCAF_N,pfam_Bromodomain,pfam_GNAT_dom,superfamily_Bromodomain,superfamily_Acyl_CoA_acyltransferase,smart_Bromodomain,pfscan_Bromodomain,pfscan_GNAT_dom,prints_Bromodomain	-	no_errors	KAT2A	HGNC	ENSG00000108773	tier1			85	0	0.00	61	13	17.57
KAT6A	0	genome.wustl.edu	37	8	41791588	41791588	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	41791588	41791588	C	T	SNP	KAT6A	ENST00000265713	human	ensembl	74_37	-1	known	missense	c.4150	p.V1384M	0.568	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6A	HGNC	ENSG00000083168	tier1	-	-	24	0	0.00	32	5	13.51
KAZALD1	0	genome.wustl.edu	37	10	102826316	102826316	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	102826316	102826316	G	T	SNP	KAZALD1	ENST00000608812	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KAZALD1	HGNC	ENSG00000107821	tier1	-	-	71	0	0.00	51	15	22.73
KBTBD3	0	genome.wustl.edu	37	11	105923925	105923925	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	105923925	105923925	A	-	DEL	KBTBD3	ENST00000526793	human	ensembl	74_37	-1	known	frame_shift_del	c.1491	p.H498fs	1.000	pirsf_Kelch-like_gigaxonin	pfam_BACK,pfam_BTB_POZ,pfam_Kelch_1,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KBTBD3	HGNC	ENSG00000182359	tier1			34	0	0.00	41	6	12.77
KCNA4	0	genome.wustl.edu	37	11	30033718	30033718	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	30033718	30033718	G	A	SNP	KCNA4	ENST00000328224	human	ensembl	74_37	-1	known	missense	c.508	p.R170C	1.000	NULL	pfam_K_chnl_volt-dep_Kv1.4_TID,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv1.4,prints_K_chnl_volt-dep_Kv1,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNA4	HGNC	ENSG00000182255	tier1	-	-	28	0	0.00	13	3	18.75
KCNAB2	0	genome.wustl.edu	37	1	6150469	6150469	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	6150469	6150469	C	T	SNP	KCNAB2	ENST00000378083	human	ensembl	74_37	+1	known	nonsense	c.535	p.R179*	0.999	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_K_chnl_volt-dep_bsu_KCNAB-rel,tigrfam_K_chnl_volt-dep_bsu_KCNAB	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_K_chnl_volt-dep_bsu_KCNAB1,prints_K_chnl_volt-dep_bsu_KCNAB2,prints_K_chnl_volt-dep_bsu_KCNAB-rel,prints_K_chnl_volt-dep_bsu_KCNAB3,tigrfam_K_chnl_volt-dep_bsu_KCNAB	-	no_errors	KCNAB2	HGNC	ENSG00000069424	tier1	rs139249498	-	80	0	0.00	57	9	13.64
KCNC1	0	genome.wustl.edu	37	11	17794026	17794026	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	17794026	17794026	G	A	SNP	KCNC1	ENST00000265969	human	ensembl	74_37	+1	known	missense	c.1385	p.R462Q	1.000	prints_K_chnl_volt-dep_Kv3	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv3.1,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv9	-	no_errors	KCNC1	HGNC	ENSG00000129159	tier1	rs200123434	-	46	0	0.00	31	8	20.51
KCNH1	0	genome.wustl.edu	37	1	211192294	211192294	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	211192294	211192294	C	T	SNP	KCNH1	ENST00000271751	human	ensembl	74_37	-1	known	missense	c.863	p.R288H	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH1	HGNC	ENSG00000143473				58	0	0.00	55	3	5.17
KCNH3	0	genome.wustl.edu	37	12	49943287	49943287	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	49943287	49943287	G	A	SNP	KCNH3	ENST00000257981	human	ensembl	74_37	+1	known	missense	c.1532	p.R511H	1.000	superfamily_cNMP-bd-like	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_cNMP-bd_dom,pfam_PAS_4,pfam_PAS_fold,pfam_PAS_fold_3,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH3	HGNC	ENSG00000135519	tier1	-	-	53	0	0.00	35	16	31.37
KCNJ5	0	genome.wustl.edu	37	11	128781288	128781288	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	128781288	128781288	G	A	SNP	KCNJ5	ENST00000529694	human	ensembl	74_37	+1	known	silent	c.120	p.T40	0.163	pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.4	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.4	-	no_errors	KCNJ5	HGNC	ENSG00000120457	tier1	-	-	50	0	0.00	38	9	19.15
KCNK13	0	genome.wustl.edu	37	14	90650656	90650657	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	90650656	90650657	-	G	INS	KCNK13	ENST00000282146	human	ensembl	74_37	+1	known	frame_shift_ins	c.536_537	p.Q181fs	0.001:0.000	NULL	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl_THIK,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK13	HGNC	ENSG00000152315	tier1			28	0	0.00	23	11	32.35
KCNN3	0	genome.wustl.edu	37	1	154842106	154842106	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	154842106	154842106	G	-	DEL	KCNN3	ENST00000271915	human	ensembl	74_37	-1	novel	frame_shift_del	c.335	p.P112fs	0.918	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN3	HGNC	ENSG00000143603	tier1			122	0	0.00	93	12	11.43
KCNN3	0	genome.wustl.edu	37	1	154744782	154744782	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	154744782	154744782	A	G	SNP	KCNN3	ENST00000271915	human	ensembl	74_37	-1	novel	missense	c.1117	p.C373R	1.000	pfam_K_chnl_Ca-activ_SK,prints_K_chnl_Ca-activ_SK	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN3	HGNC	ENSG00000143603				18	0	0.00	10	3	23.08
KCNQ1	0	genome.wustl.edu	37	11	2610023	2610023	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	2610023	2610023	G	A	SNP	KCNQ1	ENST00000155840	human	ensembl	74_37	+1	known	silent	c.1332	p.T444	0.004	prints_K_chnl_volt-dep_KCQN1	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCQN1,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ1	HGNC	ENSG00000053918	tier1	rs144985256	-	75	0	0.00	68	7	9.33
KCNQ1OT1	0	genome.wustl.edu	37	11	2683129	2683129	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	2683129	2683129	C	T	SNP	KCNQ1OT1	ENST00000597346	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KCNQ1OT1	HGNC	ENSG00000269821	tier1	-	-	40	0	0.00	25	8	24.24
KCNQ4	0	genome.wustl.edu	37	1	41298775	41298775	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	41298775	41298775	C	T	SNP	KCNQ4	ENST00000347132	human	ensembl	74_37	+1	known	missense	c.1603	p.R535C	1.000	pfam_K_chnl_volt-dep_KCNQ_C	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ4	HGNC	ENSG00000117013				37	0	0.00	32	6	15.79
KCNS1	0	genome.wustl.edu	37	20	43723597	43723597	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	43723597	43723597	T	C	SNP	KCNS1	ENST00000306117	human	ensembl	74_37	-1	known	missense	c.1495	p.T499A	0.948	NULL	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv6	-	no_errors	KCNS1	HGNC	ENSG00000124134	tier1	-	-	42	0	0.00	28	8	22.22
KCNS3	0	genome.wustl.edu	37	2	18112633	18112633	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	18112633	18112633	C	T	SNP	KCNS3	ENST00000304101	human	ensembl	74_37	+1	known	missense	c.358	p.R120C	0.995	superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv2	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv2	-	no_errors	KCNS3	HGNC	ENSG00000170745				34	0	0.00	22	2	8.33
KCNU1	0	genome.wustl.edu	37	8	36768606	36768608	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	36768606	36768608	CTC	-	DEL	KCNU1	ENST00000399881	human	ensembl	74_37	+1	known	in_frame_del	c.2490_2492	p.S833in_frame_del	0.000:0.000:0.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_Ca-activ_BK_asu	-	no_errors	KCNU1	HGNC	ENSG00000215262	tier1			64	0	0.00	58	9	13.43
KCTD8	0	genome.wustl.edu	37	4	44449818	44449818	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	44449818	44449818	G	A	SNP	KCTD8	ENST00000360029	human	ensembl	74_37	-1	known	silent	c.723	p.I241	1.000	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD8	HGNC	ENSG00000183783	tier1	-	-	26	0	0.00	15	4	21.05
KCTD8	0	genome.wustl.edu	37	4	44450294	44450294	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	44450294	44450294	C	T	SNP	KCTD8	ENST00000360029	human	ensembl	74_37	-1	known	missense	c.247	p.A83T	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD8	HGNC	ENSG00000183783	tier1	-	-	16	0	0.00	10	6	37.50
KDM3A	0	genome.wustl.edu	37	2	86684136	86684136	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	86684136	86684136	G	A	SNP	KDM3A	ENST00000312912	human	ensembl	74_37	+1	known	missense	c.785	p.R262H	0.998	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM3A	HGNC	ENSG00000115548	tier1	-	-	63	0	0.00	55	11	16.67
KDM6B	0	genome.wustl.edu	37	17	7751858	7751859	+	In_Frame_Ins	INS	-	-	CAC			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	7751858	7751859	-	CAC	INS	KDM6B	ENST00000254846	human	ensembl	74_37	+1	known	in_frame_ins	c.2252_2253	p.755in_frame_insT	0.000:0.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM6B	HGNC	ENSG00000132510	tier1			36	0	0.00	14	3	17.65
KEAP1	0	genome.wustl.edu	37	19	10610255	10610255	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	10610255	10610255	A	G	SNP	KEAP1	ENST00000171111	human	ensembl	74_37	-1	known	missense	c.455	p.V152A	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KEAP1	HGNC	ENSG00000079999				16	0	0.00	14	3	16.67
KHDRBS1	0	genome.wustl.edu	37	1	32508537	32508537	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	32508537	32508537	A	-	DEL	KHDRBS1	ENST00000307714	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.903	-	-	-	no_errors	KHDRBS1	HGNC	ENSG00000121774	tier1			36	0	0.00	22	10	31.25
KHDRBS1	0	genome.wustl.edu	37	1	32508606	32508606	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	32508606	32508606	G	T	SNP	KHDRBS1	ENST00000307714	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	KHDRBS1	HGNC	ENSG00000121774	tier1	-	-	51	0	0.00	38	7	15.56
KHDRBS1	0	genome.wustl.edu	37	1	32509353	32509353	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	32509353	32509353	G	A	SNP	KHDRBS1	ENST00000307714	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	KHDRBS1	HGNC	ENSG00000121774	tier1	-	-	44	0	0.00	33	6	15.38
KHDRBS3	0	genome.wustl.edu	37	8	136659489	136659492	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	136659489	136659492	AAAA	-	DEL	KHDRBS3	ENST00000518728	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000:1.000:1.000:0.910	-	-	-	no_errors	KHDRBS3	HGNC	ENSG00000131773	tier1			39	0	0.00	36	16	30.77
KIAA0020	0	genome.wustl.edu	37	9	2834090	2834090	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	2834090	2834090	A	G	SNP	KIAA0020	ENST00000397885	human	ensembl	74_37	-1	known	silent	c.381	p.S127	0.983	NULL	pfam_CPL,superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt,pfscan_Pumilio_RNA-bd_rpt	-	no_errors	KIAA0020	HGNC	ENSG00000080608	tier1	-	-	91	0	0.00	56	12	17.65
KIAA0368	0	genome.wustl.edu	37	9	114131441	114131441	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	114131441	114131441	T	C	SNP	KIAA0368	ENST00000259335	human	ensembl	74_37	-1	known	missense	c.5521	p.S1841G	0.997	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	KIAA0368	HGNC	ENSG00000136813	tier1	-	-	76	0	0.00	56	8	12.50
KIAA0930	0	genome.wustl.edu	37	22	45593025	45593025	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	45593025	45593025	C	T	SNP	KIAA0930	ENST00000474515	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.990	-	-	-	no_errors	KIAA0930	HGNC	ENSG00000100364	tier1	-	-	60	0	0.00	47	8	14.55
KIAA0947	0	genome.wustl.edu	37	5	5486837	5486837	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	5486837	5486837	G	A	SNP	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	missense	c.6524	p.R2175H	0.994	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151	tier1	-	-	79	0	0.00	60	21	25.93
KIAA1107	0	genome.wustl.edu	37	1	92642744	92642744	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	92642744	92642744	C	T	SNP	KIAA1107	ENST00000409154	human	ensembl	74_37	+1	known	missense	c.845	p.A282V	0.005	NULL	NULL	-	no_errors	KIAA1107	HGNC	ENSG00000069712	tier1	-	-	23	0	0.00	28	6	17.65
KIAA1109	0	genome.wustl.edu	37	4	123178534	123178534	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	123178534	123178534	C	A	SNP	KIAA1109	ENST00000264501	human	ensembl	74_37	+1	known	missense	c.6503	p.P2168H	0.999	NULL	pfam_Fragile_site-assoc_C	-	no_errors	KIAA1109	HGNC	ENSG00000138688	tier1	-	-	48	0	0.00	50	9	15.25
KIAA1211	0	genome.wustl.edu	37	4	57181235	57181235	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	57181235	57181235	C	T	SNP	KIAA1211	ENST00000504228	human	ensembl	74_37	+1	known	missense	c.1567	p.R523W	0.072	NULL	NULL	-	no_errors	KIAA1211	HGNC	ENSG00000109265	tier1	-	-	45	0	0.00	27	21	43.75
KIAA1211	0	genome.wustl.edu	37	4	57181940	57181941	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	57181940	57181941	-	C	INS	KIAA1211	ENST00000504228	human	ensembl	74_37	+1	known	frame_shift_ins	c.2272_2273	p.Q760fs	0.000:0.000	NULL	NULL	-	no_errors	KIAA1211	HGNC	ENSG00000109265	tier1			53	0	0.00	37	6	13.95
KIAA1279	0	genome.wustl.edu	37	10	70775971	70775972	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	70775971	70775972	-	A	INS	KIAA1279	ENST00000361983	human	ensembl	74_37	+1	known	frame_shift_ins	c.1665_1666	p.I556fs	1.000:1.000	pfam_KBP	pfam_KBP	-	no_errors	KIAA1279	HGNC	ENSG00000198954	tier1			89	0	0.00	44	15	25.42
KIAA1324L	0	genome.wustl.edu	37	7	86571386	86571386	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	86571386	86571386	G	A	SNP	KIAA1324L	ENST00000450689	human	ensembl	74_37	-1	known	missense	c.689	p.T230I	0.995	superfamily_Growth_fac_rcpt_N_dom	superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_Growth_fac_rcpt_N_dom	-	no_errors	KIAA1324L	HGNC	ENSG00000164659	tier1	-	-	58	0	0.00	40	6	13.04
KIAA1549	0	genome.wustl.edu	37	7	138665892	138665892	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	138665892	138665892	G	A	SNP	KIAA1549	ENST00000422774	human	ensembl	74_37	-1	known	missense	c.124	p.P42S	0.808	NULL	NULL	-	no_errors	KIAA1549	HGNC	ENSG00000122778	tier1	-	-	10	0	0.00	6	5	45.45
KIAA1644	0	genome.wustl.edu	37	22	44692715	44692715	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	44692715	44692715	G	A	SNP	KIAA1644	ENST00000381176	human	ensembl	74_37	-1	putative	missense	c.118	p.R40C	1.000	NULL	NULL	-	no_errors	KIAA1644	HGNC	ENSG00000138944	tier1	-	-	45	0	0.00	39	8	17.02
KIAA1731	0	genome.wustl.edu	37	11	93420943	93420944	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	93420943	93420944	TG	-	DEL	KIAA1731	ENST00000411936	human	ensembl	74_37	+1	known	frame_shift_del	c.1248_1249	p.V417fs	0.000:0.000	NULL	NULL	-	no_errors	KIAA1731	HGNC	ENSG00000166004	tier1			85	0	0.00	60	9	13.04
KIAA1919	0	genome.wustl.edu	37	6	111587126	111587126	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	111587126	111587126	C	T	SNP	KIAA1919	ENST00000368847	human	ensembl	74_37	+1	known	missense	c.361	p.H121Y	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	KIAA1919	HGNC	ENSG00000173214	tier1	-	-	36	0	0.00	21	9	30.00
KIAA1984-AS1	0	genome.wustl.edu	37	9	139701355	139701355	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	139701355	139701355	G	A	SNP	KIAA1984-AS1	ENST00000414656	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KIAA1984-AS1	HGNC	ENSG00000228544	tier1	-	-	39	0	0.00	25	5	16.67
KIAA2018	0	genome.wustl.edu	37	3	113376110	113376111	+	In_Frame_Ins	INS	-	-	TGC			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	113376110	113376111	-	TGC	INS	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	in_frame_ins	c.4419_4418	p.1477in_frame_insQ	0.543:0.994	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542	tier1			32	0	0.00	30	7	18.92
KIDINS220	0	genome.wustl.edu	37	2	8934033	8934033	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	8934033	8934033	G	A	SNP	KIDINS220	ENST00000256707	human	ensembl	74_37	-1	known	nonsense	c.1183	p.R395*	0.059	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt	pfam_KAP_NTPase,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KIDINS220	HGNC	ENSG00000134313				66	0	0.00	63	4	5.97
KIF13A	0	genome.wustl.edu	37	6	17788023	17788023	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	17788023	17788023	T	-	DEL	KIF13A	ENST00000259711	human	ensembl	74_37	-1	known	frame_shift_del	c.3345	p.V1116fs	1.000	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13A	HGNC	ENSG00000137177	tier1			83	0	0.00	84	17	16.83
KIF13B	0	genome.wustl.edu	37	8	28974483	28974483	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	28974483	28974483	G	A	SNP	KIF13B	ENST00000524189	human	ensembl	74_37	-1	known	silent	c.3702	p.C1234	0.785	pfam_Kinesin-like	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_CAP-Gly_domain,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_CAP-Gly_domain,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_CAP-Gly_domain,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13B	HGNC	ENSG00000197892				27	0	0.00	39	3	7.14
KIF14	0	genome.wustl.edu	37	1	200524515	200524515	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	200524515	200524515	G	A	SNP	KIF14	ENST00000367350	human	ensembl	74_37	-1	known	missense	c.4421	p.S1474L	0.995	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF14	HGNC	ENSG00000118193	tier1	-	-	93	0	0.00	67	24	26.37
KIF1A	0	genome.wustl.edu	37	2	241725901	241725901	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	241725901	241725901	G	A	SNP	KIF1A	ENST00000498729	human	ensembl	74_37	-1	known	silent	c.459	p.R153	0.001	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1A	HGNC	ENSG00000130294	tier1	rs201515208	-	50	0	0.00	32	5	13.51
KIF27	0	genome.wustl.edu	37	9	86465154	86465155	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	86465154	86465155	-	T	INS	KIF27	ENST00000297814	human	ensembl	74_37	-1	known	frame_shift_ins	c.3416_3415	p.M1139fs	1.000:1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF27	HGNC	ENSG00000165115	tier1			116	0	0.00	90	10	10.00
KIFC1	0	genome.wustl.edu	37	6	33374231	33374231	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	33374231	33374231	C	T	SNP	KIFC1	ENST00000428849	human	ensembl	74_37	+1	known	silent	c.1795	p.L599	0.999	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIFC1	HGNC	ENSG00000237649	tier1	-	-	43	0	0.00	44	16	26.67
KITLG	0	genome.wustl.edu	37	12	88890764	88890764	+	RNA	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	88890764	88890764	T	A	SNP	KITLG	ENST00000378535	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	KITLG	HGNC	ENSG00000049130	tier1	-	-	51	0	0.00	42	8	16.00
KLF10	0	genome.wustl.edu	37	8	103662433	103662433	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	103662433	103662433	A	G	SNP	KLF10	ENST00000285407	human	ensembl	74_37	-1	known	missense	c.1370	p.L457P	0.943	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF10	HGNC	ENSG00000155090	tier1	-	-	51	0	0.00	60	5	7.69
KLF15	0	genome.wustl.edu	37	3	126071448	126071448	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	126071448	126071448	C	-	DEL	KLF15	ENST00000296233	human	ensembl	74_37	-1	known	frame_shift_del	c.318	p.W108fs	0.677	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF15	HGNC	ENSG00000163884	tier1			25	0	0.00	10	4	28.57
KLF17	0	genome.wustl.edu	37	1	44596234	44596234	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	44596234	44596234	C	T	SNP	KLF17	ENST00000372299	human	ensembl	74_37	+1	known	missense	c.976	p.R326C	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF17	HGNC	ENSG00000171872	tier1	-	-	49	0	0.00	35	6	14.29
KLF3	0	genome.wustl.edu	37	4	38690460	38690460	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	38690460	38690460	A	-	DEL	KLF3	ENST00000261438	human	ensembl	74_37	+1	known	frame_shift_del	c.312	p.K106fs	0.008	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF3	HGNC	ENSG00000109787	tier1			34	0	0.00	31	11	26.19
KLF4	0	genome.wustl.edu	37	9	110249642	110249642	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	110249642	110249642	C	T	SNP	KLF4	ENST00000374672	human	ensembl	74_37	-1	known	missense	c.1033	p.G345R	0.153	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF4	HGNC	ENSG00000136826	tier1	-	-	11	0	0.00	5	4	44.44
KLHL30	0	genome.wustl.edu	37	2	239054401	239054401	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	239054401	239054401	G	A	SNP	KLHL30	ENST00000409223	human	ensembl	74_37	+1	known	missense	c.1078	p.V360M	0.969	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL30	HGNC	ENSG00000168427	tier1	-	-	72	0	0.00	47	28	37.33
KLHL30	0	genome.wustl.edu	37	2	239059686	239059686	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	239059686	239059686	G	A	SNP	KLHL30	ENST00000409223	human	ensembl	74_37	+1	known	missense	c.1717	p.G573S	0.000	NULL	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL30	HGNC	ENSG00000168427	tier1	-	-	59	0	0.00	41	13	24.07
KLHL34	0	genome.wustl.edu	37	X	21674919	21674920	+	In_Frame_Ins	INS	-	-	CTC			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	21674919	21674920	-	CTC	INS	KLHL34	ENST00000379499	human	ensembl	74_37	-1	known	in_frame_ins	c.988_987	p.329in_frame_insE	0.997:0.870	smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL34	HGNC	ENSG00000185915	tier1			17	0	0.00	10	5	33.33
KLHL4	0	genome.wustl.edu	37	X	86772933	86772933	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	86772933	86772933	C	T	SNP	KLHL4	ENST00000373114	human	ensembl	74_37	+1	known	nonsense	c.37	p.Q13*	1.000	NULL	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL4	HGNC	ENSG00000102271	tier1	-	-	62	0	0.00	24	9	27.27
KLHL41	0	genome.wustl.edu	37	2	170371230	170371230	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	170371230	170371230	C	T	SNP	KLHL41	ENST00000284669	human	ensembl	74_37	+1	known	silent	c.1257	p.C419	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL41	HGNC	ENSG00000239474	tier1	-	-	43	0	0.00	26	3	10.34
KLHL6	0	genome.wustl.edu	37	3	183245687	183245687	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	183245687	183245687	C	T	SNP	KLHL6	ENST00000341319	human	ensembl	74_37	-1	known	silent	c.405	p.A135	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL6	HGNC	ENSG00000172578	tier1	rs141903870	-	49	0	0.00	34	17	33.33
KLK4	0	genome.wustl.edu	37	19	51410328	51410328	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	51410328	51410328	C	0	DEL	KLK4	ENST00000324041	human	ensembl	74_37	-1	known	frame_shift_del	c.627	p.L211fs	0.723	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK4	HGNC	ENSG00000167749				64	0	0.00	47	7	12.96
KMT2B	0	genome.wustl.edu	37	19	36212475	36212475	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	36212475	36212475	G	T	SNP	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	missense	c.2226	p.Q742H	0.921	pirsf_MeTrfase_trithorax	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333	tier1	-	-	149	0	0.00	69	15	17.86
KMT2B	0	genome.wustl.edu	37	19	36227710	36227710	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	36227710	36227710	G	T	SNP	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	nonsense	c.7279	p.E2427*	0.999	pirsf_MeTrfase_trithorax,pfam_FYrich_C,smart_FYrich_C	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333	tier1	-	-	45	0	0.00	10	16	61.54
KMT2B	0	genome.wustl.edu	37	19	36227817	36227817	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	36227817	36227817	G	A	SNP	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	silent	c.7302	p.A2434	0.263	pirsf_MeTrfase_trithorax,pfam_FYrich_C,smart_FYrich_C	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333	tier1	-	-	48	0	0.00	21	4	16.00
KMT2C	0	genome.wustl.edu	37	7	151882652	151882652	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	151882652	151882652	T	C	SNP	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	silent	c.5073	p.A1691	0.985	superfamily_HMG_box_dom,smart_HMG_box_dom	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609	tier1	-	-	55	0	0.00	54	24	30.77
KMT2D	0	genome.wustl.edu	37	12	49425056	49425056	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	49425056	49425056	G	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.13432	p.R4478W	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	42	0	0.00	23	5	17.86
KNTC1	0	genome.wustl.edu	37	12	123082350	123082350	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	123082350	123082350	C	T	SNP	KNTC1	ENST00000333479	human	ensembl	74_37	+1	known	silent	c.4428	p.G1476	0.718	NULL	pfam_RZZ-complex_KNTC1/ROD_C,superfamily_Quino_amine_DH_bsu,superfamily_WD40_repeat_dom,superfamily_PAH	-	no_errors	KNTC1	HGNC	ENSG00000184445	tier1	-	-	47	0	0.00	43	6	12.24
KREMEN1	0	genome.wustl.edu	37	22	29490351	29490351	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	29490351	29490351	A	G	SNP	KREMEN1	ENST00000327813	human	ensembl	74_37	+1	known	missense	c.203	p.Y68C	1.000	pirsf_Kremen,pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pirsf_Kremen,pfam_Kringle,pfam_WSC_carb-bd,pfam_CUB_dom,superfamily_Kringle-like,superfamily_CUB_dom,superfamily_Scorpion_toxin-like,smart_Kringle,smart_WSC_carb-bd_subgr,smart_CUB_dom,pfscan_CUB_dom,pfscan_Kringle,pfscan_WSC_carb-bd	-	no_errors	KREMEN1	HGNC	ENSG00000183762	tier1	-	-	63	0	0.00	55	10	15.38
KRT1	0	genome.wustl.edu	37	12	53069218	53069218	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	53069218	53069218	C	T	SNP	KRT1	ENST00000252244	human	ensembl	74_37	-1	known	missense	c.1694	p.S565N	0.293	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT1	HGNC	ENSG00000167768	tier1	-	-	91	0	0.00	88	5	5.38
KRT19	0	genome.wustl.edu	37	17	39684217	39684217	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	39684217	39684217	G	T	SNP	KRT19	ENST00000361566	human	ensembl	74_37	-1	known	missense	c.283	p.L95M	1.000	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT19	HGNC	ENSG00000171345	tier1	-	-	236	0	0.00	157	69	30.53
KRT23	0	genome.wustl.edu	37	17	39092612	39092612	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	39092612	39092612	G	A	SNP	KRT23	ENST00000209718	human	ensembl	74_37	-1	known	missense	c.244	p.R82C	1.000	pfam_IF	pfam_IF,prints_Keratin_I	-	no_errors	KRT23	HGNC	ENSG00000108244				141	0	0.00	92	5	5.15
KRT40	0	genome.wustl.edu	37	17	39135256	39135256	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	39135256	39135256	G	A	SNP	KRT40	ENST00000377755	human	ensembl	74_37	-1	known	silent	c.996	p.T332	0.000	pfam_IF	pfam_IF,prints_Keratin_I	-	no_errors	KRT40	HGNC	ENSG00000204889	tier1	-	-	34	0	0.00	24	7	22.58
KRT6A	0	genome.wustl.edu	37	12	52885367	52885367	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	52885367	52885367	G	A	SNP	KRT6A	ENST00000330722	human	ensembl	74_37	-1	known	missense	c.694	p.R232W	0.221	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6A	HGNC	ENSG00000205420	tier1	-	-	118	0	0.00	68	21	23.60
KRT72	0	genome.wustl.edu	37	12	52985384	52985384	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	52985384	52985384	C	T	SNP	KRT72	ENST00000293745	human	ensembl	74_37	-1	known	missense	c.827	p.S276N	0.963	pfam_IF,superfamily_Prefoldin	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT72	HGNC	ENSG00000170486	tier1	-	-	82	0	0.00	70	10	12.50
KRT84	0	genome.wustl.edu	37	12	52771912	52771913	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	52771912	52771913	-	G	INS	KRT84	ENST00000257951	human	ensembl	74_37	-1	known	frame_shift_ins	c.1709_1708	p.L570fs	0.994:0.994	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II,prints_Keratin_I	-	no_errors	KRT84	HGNC	ENSG00000161849	tier1			59	0	0.00	36	7	16.28
KRTAP10-12	0	genome.wustl.edu	37	21	46117509	46117509	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	46117509	46117509	C	T	SNP	KRTAP10-12	ENST00000400365	human	ensembl	74_37	+1	known	silent	c.393	p.C131	0.989	NULL	NULL	-	no_errors	KRTAP10-12	HGNC	ENSG00000189169	tier1	-	-	169	0	0.00	105	23	17.97
KRTAP2-3	0	genome.wustl.edu	37	17	39216157	39216157	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	39216157	39216157	C	T	SNP	KRTAP2-3	ENST00000391418	human	ensembl	74_37	-1	known	missense	c.146	p.R49H	0.994	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP2-3	HGNC	ENSG00000212724	tier1	-	-	45	0	0.00	33	20	37.74
KRTAP5-5	0	genome.wustl.edu	37	11	1651172	1651172	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	1651172	1651172	C	T	SNP	KRTAP5-5	ENST00000399676	human	ensembl	74_37	+1	known	silent	c.102	p.G34	0.993	NULL	NULL	-	no_errors	KRTAP5-5	HGNC	ENSG00000185940	tier1	-	-	150	0	0.00	159	17	9.66
KSR1	0	genome.wustl.edu	37	17	25915549	25915549	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	25915549	25915549	C	T	SNP	KSR1	ENST00000319524	human	ensembl	74_37	+1	known	missense	c.1034	p.S345L	0.867	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	KSR1	HGNC	ENSG00000141068	tier1	-	-	87	0	0.00	58	7	10.77
KSR2	0	genome.wustl.edu	37	12	117923482	117923482	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	117923482	117923482	C	T	SNP	KSR2	ENST00000339824	human	ensembl	74_37	-1	known	missense	c.2234	p.R745Q	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	KSR2	HGNC	ENSG00000171435	tier1	-	-	31	0	0.00	19	5	20.83
L3MBTL4	0	genome.wustl.edu	37	18	6093420	6093420	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	6093420	6093420	G	T	SNP	L3MBTL4	ENST00000284898	human	ensembl	74_37	-1	known	nonsense	c.1307	p.S436*	0.422	NULL	pfam_Mbt,pfam_SAM_type1,pfam_Znf_C2HC,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt,pfscan_SAM	-	no_errors	L3MBTL4	HGNC	ENSG00000154655	tier1	-	-	89	0	0.00	68	4	5.56
LAG3	0	genome.wustl.edu	37	12	6886966	6886966	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	6886966	6886966	G	A	SNP	LAG3	ENST00000203629	human	ensembl	74_37	+1	known	missense	c.1310	p.R437H	0.000	NULL	smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	LAG3	HGNC	ENSG00000089692	tier1	-	-	43	0	0.00	29	5	14.71
LAMA1	0	genome.wustl.edu	37	18	6995375	6995375	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	6995375	6995375	G	A	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	missense	c.4877	p.T1626M	0.007	pfam_Laminin_I	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680	tier1	rs201454996	-	80	0	0.00	67	27	28.12
LAMA1	0	genome.wustl.edu	37	18	7024414	7024414	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	7024414	7024414	C	T	SNP	LAMA1	ENST00000389658	human	ensembl	74_37	-1	known	nonsense	c.2454	p.W818*	1.000	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_B_type_IV,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA1	HGNC	ENSG00000101680				71	0	0.00	49	4	7.55
LAMA5	0	genome.wustl.edu	37	20	60892021	60892021	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	60892021	60892021	C	T	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.7570	p.A2524T	1.000	NULL	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	tier1	-	-	92	0	0.00	67	13	16.25
LAMA5	0	genome.wustl.edu	37	20	60911396	60911396	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	60911396	60911396	G	A	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.2323	p.R775C	0.999	smart_EG-like_dom	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	tier1	rs201613863	-	72	0	0.00	47	24	33.80
LARP4B	0	genome.wustl.edu	37	10	875405	875405	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	875405	875405	G	T	SNP	LARP4B	ENST00000316157	human	ensembl	74_37	-1	known	missense	c.1045	p.P349T	1.000	NULL	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4B	HGNC	ENSG00000107929	tier1	-	-	39	0	0.00	28	9	24.32
LARP4B	0	genome.wustl.edu	37	10	890939	890939	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	890939	890939	T	0	DEL	LARP4B	ENST00000316157	human	ensembl	74_37	-1	known	frame_shift_del	c.487	p.T163fs	1.000	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	pfam_Lupus_La_RNA-bd,smart_Lupus_La_RNA-bd,pfscan_Lupus_La_RNA-bd	-	no_errors	LARP4B	HGNC	ENSG00000107929				36	0	0.00	36	7	16.28
LCE1C	0	genome.wustl.edu	37	1	152777650	152777650	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	152777650	152777650	C	-	DEL	LCE1C	ENST00000368768	human	ensembl	74_37	-1	known	frame_shift_del	c.305	p.G102fs	0.940	NULL	NULL	-	no_errors	LCE1C	HGNC	ENSG00000197084	tier1			70	0	0.00	63	18	22.22
LCK	0	genome.wustl.edu	37	1	32740999	32740999	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	32740999	32740999	C	T	SNP	LCK	ENST00000333070	human	ensembl	74_37	+1	known	missense	c.356	p.A119V	1.000	smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	LCK	HGNC	ENSG00000182866	tier1	-	-	83	0	0.00	42	25	37.31
LCMT1	0	genome.wustl.edu	37	16	25143764	25143764	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	25143764	25143764	G	A	SNP	LCMT1	ENST00000399069	human	ensembl	74_37	+1	known	missense	c.247	p.A83T	1.000	pfam_LCM_MeTrfase,pirsf_Leu_CO_MeTrfase_LCMT1	pfam_LCM_MeTrfase,pirsf_Leu_CO_MeTrfase_LCMT1	-	no_errors	LCMT1	HGNC	ENSG00000205629	tier1	-	-	69	0	0.00	64	5	7.25
LCN10	0	genome.wustl.edu	37	9	139636343	139636343	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	139636343	139636343	C	T	SNP	LCN10	ENST00000497771	human	ensembl	74_37	-1	known	missense	c.247	p.A83T	0.003	superfamily_Calycin-like	superfamily_Calycin-like	-	no_errors	LCN10	HGNC	ENSG00000187922				71	0	0.00	54	6	9.84
LCORL	0	genome.wustl.edu	37	4	18023330	18023330	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	18023330	18023330	A	G	SNP	LCORL	ENST00000382226	human	ensembl	74_37	-1	known	silent	c.45	p.A15	0.996	NULL	pfam_HTH_Psq,superfamily_Homeodomain-like,pfscan_HTH_Psq	-	no_errors	LCORL	HGNC	ENSG00000178177	tier1	-	-	18	0	0.00	9	6	40.00
LCP2	0	genome.wustl.edu	37	5	169697818	169697818	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	169697818	169697818	G	T	SNP	LCP2	ENST00000046794	human	ensembl	74_37	-1	known	missense	c.428	p.A143E	0.176	NULL	pfam_SH2,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,smart_SH2,pfscan_SH2	-	no_errors	LCP2	HGNC	ENSG00000043462	tier1	-	-	76	0	0.00	68	13	16.05
LDLRAP1	0	genome.wustl.edu	37	1	25893406	25893406	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	25893406	25893406	G	A	SNP	LDLRAP1	ENST00000374338	human	ensembl	74_37	+1	known	missense	c.850	p.A284T	0.986	NULL	pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	LDLRAP1	HGNC	ENSG00000157978	tier1	rs144622500	-	73	0	0.00	44	12	21.43
LDLRAP1	0	genome.wustl.edu	37	1	25889632	25889632	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	25889632	25889632	T	0	DEL	LDLRAP1	ENST00000374338	human	ensembl	74_37	+1	known	frame_shift_del	c.604	p.S202fs	0.000	NULL	pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	LDLRAP1	HGNC	ENSG00000157978				148	0	0.00	136	8	5.56
LGR5	0	genome.wustl.edu	37	12	71977667	71977667	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	71977667	71977667	G	A	SNP	LGR5	ENST00000266674	human	ensembl	74_37	+1	known	missense	c.1877	p.R626Q	0.375	pfam_GPCR_Rhodpsn,prints_Gphrmn_rcpt_fam,pfscan_GPCR_Rhodpsn_7TM	pfam_Leu-rich_rpt,pfam_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	LGR5	HGNC	ENSG00000139292	tier1	-	-	66	0	0.00	67	12	15.19
LHX6	0	genome.wustl.edu	37	9	124967006	124967006	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	124967006	124967006	C	T	SNP	LHX6	ENST00000340587	human	ensembl	74_37	-1	known	missense	c.1108	p.A370T	0.996	NULL	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LHX6	HGNC	ENSG00000106852	tier1	-	-	91	0	0.00	50	16	23.88
LIAS	0	genome.wustl.edu	37	4	39462464	39462464	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	39462464	39462464	A	-	DEL	LIAS	ENST00000261434	human	ensembl	74_37	+1	known	frame_shift_del	c.100	p.K36fs	0.641	pirsf_Lipoyl_synth	pfam_rSAM,smart_Elp3/MiaB/NifB,pirsf_Lipoyl_synth,tigrfam_Lipoyl_synth	-	no_errors	LIAS	HGNC	ENSG00000121897	tier1			40	0	0.00	32	10	23.81
LIG3	0	genome.wustl.edu	37	17	33326423	33326423	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	33326423	33326423	G	A	SNP	LIG3	ENST00000378526	human	ensembl	74_37	+1	known	silent	c.2211	p.T737	0.576	pfam_DNA_ligase_ATP-dep_C,superfamily_NA-bd_OB-fold,tigrfam_DNA_ligase_ATP-dep	pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_Znf_PARP,pfam_DNA_ligase_ATP-dep_C,superfamily_NA-bd_OB-fold,superfamily_BRCT_dom,superfamily_DNA_ligase_ATP-dep_N,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_Znf_PARP,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	-	no_errors	LIG3	HGNC	ENSG00000005156				31	0	0.00	43	3	6.52
LILRB2	0	genome.wustl.edu	37	19	54778658	54778658	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	54778658	54778658	T	A	SNP	LILRB2	ENST00000391749	human	ensembl	74_37	-1	known	missense	c.1676	p.D559V	0.762	NULL	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB2	HGNC	ENSG00000131042	tier1	-	-	155	0	0.00	101	9	8.18
LILRB4	0	genome.wustl.edu	37	19	55179121	55179121	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	55179121	55179121	G	A	SNP	LILRB4	ENST00000270452	human	ensembl	74_37	+1	known	silent	c.1077	p.T359	0.000	NULL	pfam_Immunoglobulin,pfscan_Ig-like_dom	-	no_errors	LILRB4	HGNC	ENSG00000186818	tier1	rs61738941	-	103	0	0.00	78	42	35.00
LIM2	0	genome.wustl.edu	37	19	51885678	51885678	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	51885678	51885678	A	-	DEL	LIM2	ENST00000221973	human	ensembl	74_37	-1	known	frame_shift_del	c.445	p.S149fs	0.901	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_LMIP,prints_PMP22_EMP_MP20	-	no_errors	LIM2	HGNC	ENSG00000105370	tier1			31	0	0.00	32	11	25.58
LIM2	0	genome.wustl.edu	37	19	51883833	51883833	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	51883833	51883833	C	T	SNP	LIM2	ENST00000221973	human	ensembl	74_37	-1	known	missense	c.512	p.R171H	1.000	pfam_PMP22/EMP/MP20/Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_LMIP,prints_PMP22_EMP_MP20	-	no_errors	LIM2	HGNC	ENSG00000105370				42	0	0.00	46	4	8.00
LIMA1	0	genome.wustl.edu	37	12	50594561	50594561	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	50594561	50594561	T	C	SNP	LIMA1	ENST00000394943	human	ensembl	74_37	-1	known	missense	c.971	p.K324R	1.000	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LIMA1	HGNC	ENSG00000050405	tier1	-	-	83	0	0.00	56	11	16.18
LIMD1	0	genome.wustl.edu	37	3	45637755	45637755	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	45637755	45637755	G	A	SNP	LIMD1	ENST00000273317	human	ensembl	74_37	+1	known	missense	c.1384	p.A462T	1.000	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LIMD1	HGNC	ENSG00000144791	tier1	-	-	39	0	0.00	30	17	36.17
LIMK2	0	genome.wustl.edu	37	22	31658176	31658176	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	31658176	31658176	G	A	SNP	LIMK2	ENST00000331728	human	ensembl	74_37	+1	known	missense	c.608	p.R203H	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Znf_LIM,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_PDZ,smart_Znf_LIM,smart_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_LIM,pfscan_PDZ,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LIMK2	HGNC	ENSG00000182541	tier1	-	-	61	0	0.00	32	15	31.91
LIMS2	0	genome.wustl.edu	37	2	128396003	128396003	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	128396003	128396003	G	A	SNP	LIMS2	ENST00000494613	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LIMS2	HGNC	ENSG00000072163	tier1	-	-	103	0	0.00	69	8	10.39
LIN28B	0	genome.wustl.edu	37	6	105526529	105526529	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	105526529	105526529	G	T	SNP	LIN28B	ENST00000345080	human	ensembl	74_37	+1	known	missense	c.624	p.Q208H	1.000	NULL	pfam_CSP_DNA-bd,superfamily_NA-bd_OB-fold,superfamily_Znf_CCHC,smart_Cold_shock_prot,smart_Znf_CCHC,pfscan_Znf_CCHC,prints_CSP_DNA-bd	-	no_errors	LIN28B	HGNC	ENSG00000187772	tier1	-	-	61	0	0.00	33	12	26.67
LINC00452	0	genome.wustl.edu	37	13	114622476	114622477	+	RNA	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	114622476	114622477	-	C	INS	LINC00452	ENST00000426859	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	LINC00452	HGNC	ENSG00000229373	tier1			200	0	0.00	119	40	25.16
LINC00588	0	genome.wustl.edu	37	8	58192537	58192537	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	58192537	58192537	G	A	SNP	LINC00588	ENST00000521663	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.029	-	-	-	no_errors	LINC00588	HGNC	ENSG00000215117				34	0	0.00	34	3	8.11
LINC00615	0	genome.wustl.edu	37	12	91340253	91340254	+	RNA	DEL	TT	TT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	91340253	91340254	TT	-	DEL	LINC00615	ENST00000546725	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.148:0.180	-	-	-	no_errors	LINC00615	HGNC	ENSG00000196243	tier1			41	0	0.00	25	7	21.88
LINC00668	0	genome.wustl.edu	37	18	6928400	6928400	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	6928400	6928400	C	T	SNP	LINC00668	ENST00000579012	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	LINC00668	HGNC	ENSG00000265933	tier1	-	-	49	0	0.00	43	7	14.00
LINC00670	0	genome.wustl.edu	37	17	12493915	12493915	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	12493915	12493915	T	C	SNP	LINC00670	ENST00000313495	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00670	HGNC	ENSG00000179136	tier1	-	-	49	0	0.00	29	9	23.68
LINC00933	0	genome.wustl.edu	37	15	85121557	85121558	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	85121557	85121558	AA	-	DEL	LINC00933	ENST00000557887	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004:0.003	-	-	-	no_errors	LINC00933	HGNC	ENSG00000259728	tier1			10	0	0.00	4	3	42.86
LINC00935	0	genome.wustl.edu	37	12	49129870	49129870	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	49129870	49129870	G	T	SNP	LINC00935	ENST00000548054	human	ensembl	74_37	+1	known	splice_site	c.80-1	e2-1	0.105	-	-	-	no_errors	LINC00935	HGNC	ENSG00000257987	tier1	-	-	42	0	0.00	16	6	27.27
LINC00943	0	genome.wustl.edu	37	12	127229758	127229758	+	RNA	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	127229758	127229758	C	A	SNP	LINC00943	ENST00000345111	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	LINC00943	HGNC	ENSG00000189238	tier1	-	-	33	0	0.00	25	12	32.43
LINC00955	0	genome.wustl.edu	37	4	3590787	3590787	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	3590787	3590787	A	C	SNP	LINC00955	ENST00000514422	human	ensembl	74_37	+1	novel	missense	c.272	p.N91T	0.267	NULL	NULL	-	no_errors	LINC00955	HGNC	ENSG00000216560	tier1	-	-	64	0	0.00	53	4	6.90
LINGO1	0	genome.wustl.edu	37	15	77906417	77906417	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	77906417	77906417	G	A	SNP	LINGO1	ENST00000355300	human	ensembl	74_37	-1	known	missense	c.1832	p.A611V	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LINGO1	HGNC	ENSG00000169783	tier1	-	-	25	0	0.00	13	4	23.53
LIPE	0	genome.wustl.edu	37	19	42911556	42911556	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	42911556	42911556	C	T	SNP	LIPE	ENST00000244289	human	ensembl	74_37	-1	known	missense	c.1907	p.R636H	0.938	pfam_Steryl_acetyl_hydrolase	pfam_HSL_N,pfam_AB_hydrolase_3,pfam_Steryl_acetyl_hydrolase	-	no_errors	LIPE	HGNC	ENSG00000079435				53	0	0.00	47	4	7.84
LLGL1	0	genome.wustl.edu	37	17	18138543	18138543	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	18138543	18138543	G	A	SNP	LLGL1	ENST00000316843	human	ensembl	74_37	+1	known	missense	c.1201	p.V401M	0.926	superfamily_WD40_repeat_dom	pfam_LLGL2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,prints_Lethal2_giant	-	no_errors	LLGL1	HGNC	ENSG00000131899	tier1	-	-	38	0	0.00	33	6	15.38
LMAN1	0	genome.wustl.edu	37	18	57013285	57013285	+	Splice_Site	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	57013285	57013285	T	-	DEL	LMAN1	ENST00000251047	human	ensembl	74_37	-1	known	splice_site_del	c.823-2	e8-2	1.000	-	-	-	no_errors	LMAN1	HGNC	ENSG00000074695	tier1			54	0	0.00	33	12	26.67
LMAN1	0	genome.wustl.edu	37	18	57026329	57026329	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	57026329	57026329	A	T	SNP	LMAN1	ENST00000251047	human	ensembl	74_37	-1	known	missense	c.148	p.Y50N	1.000	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf,superfamily_HMG_box_dom	-	no_errors	LMAN1	HGNC	ENSG00000074695	tier1	-	-	128	0	0.00	86	7	7.53
LMAN2L	0	genome.wustl.edu	37	2	97377431	97377431	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	97377431	97377431	T	A	SNP	LMAN2L	ENST00000377079	human	ensembl	74_37	-1	known	missense	c.779	p.Y260F	1.000	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf	-	no_errors	LMAN2L	HGNC	ENSG00000114988				43	0	0.00	28	3	9.68
LMCD1	0	genome.wustl.edu	37	3	8578939	8578939	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	8578939	8578939	G	A	SNP	LMCD1	ENST00000157600	human	ensembl	74_37	+1	known	missense	c.200	p.R67Q	1.000	NULL	pfam_PET_domain,pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LMCD1	HGNC	ENSG00000071282	tier1	-	-	35	0	0.00	30	5	14.29
LMLN	0	genome.wustl.edu	37	3	197687103	197687103	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	197687103	197687103	C	A	SNP	LMLN	ENST00000330198	human	ensembl	74_37	+1	known	missense	c.11	p.T4K	1.000	NULL	pfam_Peptidase_M8	-	no_errors	LMLN	HGNC	ENSG00000185621	tier1	-	-	17	0	0.00	21	5	19.23
LMO7	0	genome.wustl.edu	37	13	76432182	76432183	+	RNA	INS	-	-	TA			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	76432182	76432183	-	TA	INS	LMO7	ENST00000605961	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.669:0.209	-	-	-	no_errors	LMO7	HGNC	ENSG00000136153	tier1			61	0	0.00	47	15	24.19
LMOD1	0	genome.wustl.edu	37	1	201869461	201869461	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	201869461	201869461	C	T	SNP	LMOD1	ENST00000367288	human	ensembl	74_37	-1	known	missense	c.680	p.R227H	0.012	NULL	pfam_Tropomodulin,pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	LMOD1	HGNC	ENSG00000163431	tier1	rs199655500	-	109	0	0.00	56	6	9.68
LMTK3	0	genome.wustl.edu	37	19	49003054	49003054	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	49003054	49003054	G	T	SNP	LMTK3	ENST00000270238	human	ensembl	74_37	-1	known	silent	c.1359	p.P453	0.889	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LMTK3	HGNC	ENSG00000142235	tier1	-	-	50	0	0.00	32	10	23.81
LNPEP	0	genome.wustl.edu	37	5	96315249	96315249	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	96315249	96315249	A	-	DEL	LNPEP	ENST00000231368	human	ensembl	74_37	+1	known	frame_shift_del	c.427	p.N145fs	0.910	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	LNPEP	HGNC	ENSG00000113441	tier1			34	0	0.00	27	3	10.00
LOC100129029	0	genome.wustl.edu	37	2	159517033	159517033	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	159517033	159517033	C	T	SNP	LOC100129029	ENST00000342892	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC005042.4	Clone_based_vega_gene	ENSG00000204380	tier1	-	-	55	0	0.00	41	7	14.58
LOC100190940	0	genome.wustl.edu	37	12	130520718	130520718	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	130520718	130520718	G	A	SNP	LOC100190940	ENST00000291374	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.116	-	-	-	no_errors	RP11-474D1.3	Clone_based_vega_gene	ENSG00000214039				23	0	0.00	11	7	38.89
LOC100506731	0	genome.wustl.edu	37	14	85996121	85996121	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	85996121	85996121	G	A	SNP	LOC100506731	ENST00000380722	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.079	-	-	-	no_errors	RP11-497E19.1	Clone_based_vega_gene	ENSG00000205562	tier1	-	-	84	0	0.00	74	7	8.64
LOC100996415	0	genome.wustl.edu	37	22	20342668	20342668	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	20342668	20342668	T	C	SNP	LOC100996415	ENST00000454636	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	XXbac-B33L19.3	Clone_based_vega_gene	ENSG00000188424	tier1	-	-	17	0	0.00	7	8	53.33
LOC101927091	0	genome.wustl.edu	37	15	94364263	94364263	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	94364263	94364263	C	T	SNP	LOC101927091	ENST00000553818	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-3049M7.1	Clone_based_vega_gene	ENSG00000258754	tier1	-	-	48	0	0.00	33	12	26.67
LOC101927345	0	genome.wustl.edu	37	1	143391692	143391692	+	RNA	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	143391692	143391692	T	G	SNP	LOC101927345	ENST00000412492	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.913	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261	tier1	-	-	380	0	0.00	338	24	6.63
LOC101927345	0	genome.wustl.edu	37	1	143392642	143392642	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	143392642	143392642	A	0	DEL	LOC101927345	ENST00000415543	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261				134	0	0.00	145	8	5.23
LOC101928664	0	genome.wustl.edu	37	19	12494418	12494418	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	12494418	12494418	G	A	SNP	LOC101928664	ENST00000435033	human	ensembl	74_37	-1	known	silent	c.87	p.Y29	0.863	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	CTD-3105H18.14	Clone_based_vega_gene	ENSG00000268744	tier1	-	-	114	0	0.00	95	13	12.04
LOC101929274	0	genome.wustl.edu	37	16	11554935	11554935	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	11554935	11554935	G	A	SNP	LOC101929274	ENST00000344649	human	ensembl	74_37	-1	known	silent	c.231	p.A77	0.000	NULL	NULL	-	no_errors	CTD-3088G3.8	Clone_based_vega_gene	ENSG00000188897	tier1	-	-	55	0	0.00	41	10	19.61
LOC101929372	0	genome.wustl.edu	37	22	18064286	18064286	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	18064286	18064286	G	-	DEL	LOC101929372	ENST00000443935	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC004019.13	Clone_based_vega_gene	ENSG00000236754	tier1			26	0	0.00	32	5	13.51
LOC101929847	0	genome.wustl.edu	37	15	84868578	84868579	+	RNA	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	84868578	84868579	-	C	INS	LOC101929847	ENST00000316967	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.002	-	-	-	no_errors	AC103965.1	Clone_based_vega_gene	ENSG00000225151	tier1			127	0	0.00	84	27	24.32
LOC101929948	0	genome.wustl.edu	37	14	19563232	19563232	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	19563232	19563232	T	C	SNP	LOC101929948	ENST00000548748	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.050	-	-	-	no_errors	CTD-2311B13.5	Clone_based_vega_gene	ENSG00000258252	tier1	-	-	26	0	0.00	24	25	51.02
LOC202181	0	genome.wustl.edu	37	5	177099156	177099156	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	177099156	177099156	C	T	SNP	LOC202181	ENST00000515045	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.886	-	-	-	no_errors	RP11-1277A3.2	Clone_based_vega_gene	ENSG00000246596	tier1	-	-	38	0	0.00	10	5	33.33
LOC285556	0	genome.wustl.edu	37	4	100575742	100575742	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	100575742	100575742	C	T	SNP	LOC285556	ENST00000511828	human	ensembl	74_37	-1	putative	missense	c.64	p.D22N	0.469	NULL	NULL	-	no_errors	RP11-766F14.2	Clone_based_vega_gene	ENSG00000248713	tier1	-	-	114	0	0.00	83	14	14.43
LOC344967	0	genome.wustl.edu	37	4	40045118	40045118	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	40045118	40045118	C	T	SNP	LOC344967	ENST00000381811	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.899	-	-	-	no_errors	RP11-333E13.4	Clone_based_vega_gene	ENSG00000205794	tier1	-	-	43	0	0.00	38	11	22.45
LOC399815	0	genome.wustl.edu	37	10	124648141	124648141	+	RNA	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	124648141	124648141	C	A	SNP	LOC399815	ENST00000425266	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.919	-	-	-	no_errors	RP11-564D11.3	Clone_based_vega_gene	ENSG00000255624	tier1	-	-	69	0	0.00	60	4	6.25
LOC400794	0	genome.wustl.edu	37	1	165550908	165550908	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	165550908	165550908	C	T	SNP	LOC400794	ENST00000416424	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	RP11-280O1.2	Clone_based_vega_gene	ENSG00000237463	tier1	-	-	21	0	0.00	20	5	20.00
LOC440040	0	genome.wustl.edu	37	11	49831722	49831722	+	RNA	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	49831722	49831722	C	A	SNP	LOC440040	ENST00000527477	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	RP11-707M1.1	Clone_based_vega_gene	ENSG00000205035	tier1	-	-	231	0	0.00	154	55	26.32
LOC440518	0	genome.wustl.edu	37	19	22784760	22784760	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	22784760	22784760	A	G	SNP	LOC440518	ENST00000600260	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	CTC-457E21.3	Clone_based_vega_gene	ENSG00000269332	tier1	-	-	18	0	0.00	14	5	26.32
LOC440895	0	genome.wustl.edu	37	2	110742074	110742074	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	110742074	110742074	A	G	SNP	LOC440895	ENST00000454928	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.950	-	-	-	no_errors	AC013271.3	Clone_based_vega_gene	ENSG00000186148	tier1	-	-	66	0	0.00	53	14	20.90
LOC645188	0	genome.wustl.edu	37	X	140714666	140714666	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	140714666	140714666	A	-	DEL	LOC645188	ENST00000412163	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP1-171K16.5	Clone_based_vega_gene	ENSG00000223438	tier1			51	0	0.00	36	9	20.00
LOC728715	0	genome.wustl.edu	37	12	9720433	9720433	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	9720433	9720433	G	0	DEL	LOC728715	ENST00000520314	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	RP11-726G1.1	Clone_based_vega_gene	ENSG00000214776				9	0	0.00	5	7	58.33
LOC730441	0	genome.wustl.edu	37	7	141971109	141971109	+	RNA	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	141971109	141971109	C	-	DEL	LOC730441	ENST00000334288	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	U66059.29	Clone_based_vega_gene	ENSG00000186163	tier1			20	0	0.00	25	4	13.79
LOXL4	0	genome.wustl.edu	37	10	100019168	100019168	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	100019168	100019168	C	A	SNP	LOXL4	ENST00000260702	human	ensembl	74_37	-1	known	missense	c.681	p.K227N	1.000	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_Lysyl_oxidase,pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_Lysyl_oxidase,prints_SRCR	-	no_errors	LOXL4	HGNC	ENSG00000138131	tier1	-	-	38	0	0.00	28	4	12.50
LPHN1	0	genome.wustl.edu	37	19	14288527	14288527	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	14288527	14288527	G	A	SNP	LPHN1	ENST00000340736	human	ensembl	74_37	-1	known	silent	c.100	p.L34	1.000	NULL	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN1	HGNC	ENSG00000072071	tier1	-	-	19	0	0.00	17	4	19.05
LPIN1	0	genome.wustl.edu	37	2	11960543	11960543	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	11960543	11960543	T	C	SNP	LPIN1	ENST00000449576	human	ensembl	74_37	+1	known	missense	c.2671	p.Y891H	1.000	pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2	pfam_LNS2,pfam_Lipin_N,superfamily_HAD-like_dom,superfamily_WD40_repeat_dom,smart_LNS2	-	no_errors	LPIN1	HGNC	ENSG00000134324	tier1	-	-	53	0	0.00	39	14	26.42
LPIN1	0	genome.wustl.edu	37	2	11964848	11964848	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	11964848	11964848	T	C	SNP	LPIN1	ENST00000449576	human	ensembl	74_37	+1	known	silent	c.2859	p.S953	0.906	NULL	pfam_LNS2,pfam_Lipin_N,superfamily_HAD-like_dom,superfamily_WD40_repeat_dom,smart_LNS2	-	no_errors	LPIN1	HGNC	ENSG00000134324	tier1	-	-	38	0	0.00	26	10	27.78
LPIN3	0	genome.wustl.edu	37	20	39981291	39981291	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	39981291	39981291	A	C	SNP	LPIN3	ENST00000373257	human	ensembl	74_37	+1	known	missense	c.1409	p.N470T	1.000	NULL	pfam_LNS2,pfam_Lipin_N,superfamily_HAD-like_dom,smart_LNS2	-	no_errors	LPIN3	HGNC	ENSG00000132793	tier1	-	-	73	0	0.00	48	14	22.58
LPIN3	0	genome.wustl.edu	37	20	39986087	39986087	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	39986087	39986087	T	C	SNP	LPIN3	ENST00000373257	human	ensembl	74_37	+1	known	missense	c.2039	p.L680P	1.000	pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2	pfam_LNS2,pfam_Lipin_N,superfamily_HAD-like_dom,smart_LNS2	-	no_errors	LPIN3	HGNC	ENSG00000132793	tier1	-	-	36	0	0.00	12	6	33.33
LRFN3	0	genome.wustl.edu	37	19	36431206	36431206	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	36431206	36431206	C	T	SNP	LRFN3	ENST00000246529	human	ensembl	74_37	+1	known	silent	c.879	p.C293	0.982	smart_Cys-rich_flank_reg_C	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN3	HGNC	ENSG00000126243	tier1	-	-	9	0	0.00	10	8	44.44
LRIG1	0	genome.wustl.edu	37	3	66433685	66433685	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	66433685	66433685	G	T	SNP	LRIG1	ENST00000273261	human	ensembl	74_37	-1	known	silent	c.2212	p.R738	0.982	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Cys-rich_flank_reg_C,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG1	HGNC	ENSG00000144749				59	0	0.00	52	3	5.45
LRP1	0	genome.wustl.edu	37	12	57602955	57602955	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	57602955	57602955	C	T	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	missense	c.12235	p.P4079S	1.000	pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384	tier1	-	-	59	0	0.00	47	15	24.19
LRP11	0	genome.wustl.edu	37	6	150141774	150141774	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	150141774	150141774	G	A	SNP	LRP11	ENST00000239367	human	ensembl	74_37	-1	known	nonsense	c.1414	p.R472*	1.000	NULL	pfam_MANSC_N,pfam_LDrepeatLR_classA_rpt,superfamily_PKD_dom,superfamily_LDrepeatLR_classA_rpt,smart_MANSC_N,smart_PKD/Chitinase_dom,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	LRP11	HGNC	ENSG00000120256	tier1	-	-	54	0	0.00	29	7	19.44
LRP12	0	genome.wustl.edu	37	8	105502332	105502332	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	105502332	105502332	T	C	SNP	LRP12	ENST00000518375	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.310	-	-	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1	-	-	38	0	0.00	35	4	10.26
LRP12	0	genome.wustl.edu	37	8	105502342	105502342	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	105502342	105502342	G	A	SNP	LRP12	ENST00000518375	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.013	-	-	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1	-	-	38	0	0.00	33	4	10.81
LRP12	0	genome.wustl.edu	37	8	105502353	105502353	+	RNA	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	105502353	105502353	A	C	SNP	LRP12	ENST00000518375	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.129	-	-	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1	-	-	37	0	0.00	23	13	36.11
LRP12	0	genome.wustl.edu	37	8	105502452	105502452	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	105502452	105502452	T	-	DEL	LRP12	ENST00000518375	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1			53	0	0.00	38	16	29.63
LRP12	0	genome.wustl.edu	37	8	105510178	105510178	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	105510178	105510178	G	T	SNP	LRP12	ENST00000424843	human	ensembl	74_37	-1	known	missense	c.545	p.A182D	1.000	smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_CUB_dom,pfam_LDrepeatLR_classA_rpt,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1	-	-	73	0	0.00	53	20	27.40
LRP12	0	genome.wustl.edu	37	8	105601204	105601204	+	RNA	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	105601204	105601204	C	A	SNP	LRP12	ENST00000520770	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.647	-	-	-	no_errors	LRP12	HGNC	ENSG00000147650	tier1	-	-	60	0	0.00	29	18	38.30
LRP1B	0	genome.wustl.edu	37	2	141108458	141108458	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	141108458	141108458	T	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.11800	p.M3934V	1.000	superfamily_Growth_fac_rcpt_N_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	62	0	0.00	50	29	36.71
LRP1B	0	genome.wustl.edu	37	2	141208184	141208184	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	141208184	141208184	T	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.10010	p.D3337G	1.000	pfam_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	62	0	0.00	45	11	19.64
LRP2	0	genome.wustl.edu	37	2	170115713	170115713	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	170115713	170115713	C	T	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	missense	c.2335	p.A779T	0.964	smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479				19	0	0.00	23	8	25.81
LRP5	0	genome.wustl.edu	37	11	68131293	68131293	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	68131293	68131293	G	A	SNP	LRP5	ENST00000294304	human	ensembl	74_37	+1	known	nonsense	c.765	p.W255*	1.000	pirsf_Low_density_Lipo_rcpt-rel_p5/6,smart_LDLR_classB_rpt	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP5	HGNC	ENSG00000162337	tier1	-	-	95	0	0.00	60	6	9.09
LRPPRC	0	genome.wustl.edu	37	2	44145165	44145165	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	44145165	44145165	T	-	DEL	LRPPRC	ENST00000260665	human	ensembl	74_37	-1	known	frame_shift_del	c.3147	p.A1051fs	0.844	NULL	pfam_Pentatricopeptide_repeat,tigrfam_Pentatricopeptide_repeat	-	no_errors	LRPPRC	HGNC	ENSG00000138095	tier1			76	0	0.00	55	7	11.29
LRRC14	0	genome.wustl.edu	37	8	145745261	145745261	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	145745261	145745261	T	C	SNP	LRRC14	ENST00000292524	human	ensembl	74_37	+1	known	missense	c.152	p.V51A	0.998	NULL	NULL	-	no_errors	LRRC14	HGNC	ENSG00000160959	tier1	-	-	84	0	0.00	93	13	12.26
LRRC24	0	genome.wustl.edu	37	8	145747975	145747975	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	145747975	145747975	A	G	SNP	LRRC24	ENST00000529415	human	ensembl	74_37	-1	known	missense	c.1426	p.S476P	0.964	NULL	pfam_Ig_I-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRC24	HGNC	ENSG00000254402	tier1	-	-	36	0	0.00	32	7	17.95
LRRC37A4P	0	genome.wustl.edu	37	17	43587657	43587657	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	43587657	43587657	C	T	SNP	LRRC37A4P	ENST00000579913	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.062	-	-	-	no_errors	LRRC37A4P	HGNC	ENSG00000214425				65	0	0.00	56	5	8.20
LRRC37A7P	0	genome.wustl.edu	37	18	29306351	29306351	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	29306351	29306351	G	0	DEL	LRRC37A7P	ENST00000583900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.114	-	-	-	no_errors	LRRC37A7P	HGNC	ENSG00000265158				8	0	0.00	4	2	33.33
LRRC55	0	genome.wustl.edu	37	11	56949426	56949426	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	56949426	56949426	C	T	SNP	LRRC55	ENST00000497933	human	ensembl	74_37	+1	known	missense	c.59	p.S20L	0.017	NULL	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC55	HGNC	ENSG00000183908	tier1	-	-	89	0	0.00	61	10	14.08
LRRC58	0	genome.wustl.edu	37	3	120050241	120050241	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	120050241	120050241	A	T	SNP	LRRC58	ENST00000295628	human	ensembl	74_37	-1	known	missense	c.922	p.C308S	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC58	HGNC	ENSG00000163428	tier1	-	-	35	0	0.00	24	5	17.24
LRRC7	0	genome.wustl.edu	37	1	70225992	70225992	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	70225992	70225992	G	A	SNP	LRRC7	ENST00000035383	human	ensembl	74_37	+1	known	silent	c.105	p.Q35	1.000	NULL	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	LRRC7	HGNC	ENSG00000033122	tier1	-	-	35	0	0.00	22	15	40.54
LRRC8D	0	genome.wustl.edu	37	1	90400757	90400757	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	90400757	90400757	A	G	SNP	LRRC8D	ENST00000337338	human	ensembl	74_37	+1	known	silent	c.2130	p.S710	0.451	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8D	HGNC	ENSG00000171492	tier1	-	-	29	0	0.00	30	4	11.76
LRRC8E	0	genome.wustl.edu	37	19	7964449	7964449	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	7964449	7964449	C	T	SNP	LRRC8E	ENST00000306708	human	ensembl	74_37	+1	known	missense	c.1042	p.R348W	0.978	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8E	HGNC	ENSG00000171017	tier1	-	-	28	0	0.00	23	4	14.81
LRRC9	0	genome.wustl.edu	37	14	60474815	60474815	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	60474815	60474815	A	G	SNP	LRRC9	ENST00000254271	human	ensembl	74_37	+1	known	silent	c.3069	p.L1023	0.977	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC9	HGNC	ENSG00000131951	tier1	-	-	69	0	0.00	62	10	13.89
LRRIQ1	0	genome.wustl.edu	37	12	85450889	85450889	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	85450889	85450889	G	A	SNP	LRRIQ1	ENST00000393217	human	ensembl	74_37	+1	known	missense	c.2318	p.C773Y	0.982	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,smart_Leu-rich_rpt_typical-subtyp,pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ1	HGNC	ENSG00000133640	tier1	-	-	66	0	0.00	52	10	16.13
LRRK2	0	genome.wustl.edu	37	12	40740637	40740637	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	40740637	40740637	T	C	SNP	LRRK2	ENST00000298910	human	ensembl	74_37	+1	known	silent	c.6192	p.Y2064	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_MIRO-like,pfam_Small_GTPase,pfam_Leu-rich_rpt,pfam_Small_GTPase_ARF/SAR,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_ARM-type_fold,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Small_GTPase_Rab_type,smart_Tyr_kinase_cat_dom,smart_Ser/Thr_dual-sp_kinase_dom,prints_Small_GTPase,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	LRRK2	HGNC	ENSG00000188906	tier1	-	-	54	0	0.00	63	6	8.70
LRTM1	0	genome.wustl.edu	37	3	54958936	54958936	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	54958936	54958936	A	G	SNP	LRTM1	ENST00000273286	human	ensembl	74_37	-1	known	missense	c.314	p.L105P	0.996	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRTM1	HGNC	ENSG00000144771	tier1	-	-	43	0	0.00	22	3	12.00
LSM1	0	genome.wustl.edu	37	8	38021014	38021014	+	RNA	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	38021014	38021014	A	T	SNP	LSM1	ENST00000520286	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LSM1	HGNC	ENSG00000175324	tier1	-	-	32	0	0.00	36	6	14.29
LSR	0	genome.wustl.edu	37	19	35757844	35757845	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	35757844	35757845	-	C	INS	LSR	ENST00000361790	human	ensembl	74_37	+1	known	frame_shift_ins	c.1262_1263	p.S424fs	0.645:0.001	NULL	pfam_LISCH7,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	LSR	HGNC	ENSG00000105699	tier1			46	0	0.00	27	5	15.62
LTBP3	0	genome.wustl.edu	37	11	65320669	65320669	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	65320669	65320669	C	T	SNP	LTBP3	ENST00000301873	human	ensembl	74_37	-1	known	silent	c.1029	p.Q343	1.000	superfamily_TB_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP3	HGNC	ENSG00000168056	tier1	-	-	61	0	0.00	53	8	13.11
LTN1	0	genome.wustl.edu	37	21	30338185	30338185	+	Splice_Site	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	30338185	30338185	A	G	SNP	LTN1	ENST00000389194	human	ensembl	74_37	-1	known	splice_site	c.2301+2	e11+2	1.000	-	-	-	no_errors	LTN1	HGNC	ENSG00000198862	tier1	-	-	206	0	0.00	190	16	7.77
LTN1	0	genome.wustl.edu	37	21	30357050	30357050	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	30357050	30357050	G	T	SNP	LTN1	ENST00000389194	human	ensembl	74_37	-1	known	missense	c.677	p.P226H	0.997	superfamily_ARM-type_fold	pfam_Znf_C3HC4_RING-type,superfamily_ARM-type_fold,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	LTN1	HGNC	ENSG00000198862				32	0	0.00	21	5	19.23
LUZP1	0	genome.wustl.edu	37	1	23418182	23418182	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	23418182	23418182	G	A	SNP	LUZP1	ENST00000302291	human	ensembl	74_37	-1	known	missense	c.2573	p.A858V	0.637	NULL	NULL	-	no_errors	LUZP1	HGNC	ENSG00000169641	tier1	-	-	35	0	0.00	17	4	19.05
LYL1	0	genome.wustl.edu	37	19	13211729	13211729	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	13211729	13211729	G	A	SNP	LYL1	ENST00000264824	human	ensembl	74_37	-1	known	missense	c.257	p.P86L	0.171	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	LYL1	HGNC	ENSG00000104903	tier1	-	-	57	0	0.00	51	7	12.07
LYST	0	genome.wustl.edu	37	1	235993390	235993390	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	235993390	235993390	T	-	DEL	LYST	ENST00000468626	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	LYST	HGNC	ENSG00000143669	tier1			9	0	0.00	12	6	33.33
LZTR1	0	genome.wustl.edu	37	22	21348525	21348525	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	21348525	21348525	C	A	SNP	LZTR1	ENST00000215739	human	ensembl	74_37	+1	known	missense	c.1582	p.L528I	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_Kelch_1,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_Kelch_1,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	LZTR1	HGNC	ENSG00000099949	tier1	-	-	82	0	0.00	56	20	26.32
MACF1	0	genome.wustl.edu	37	1	39798688	39798688	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	39798688	39798688	C	T	SNP	MACF1	ENST00000567887	human	ensembl	74_37	+1	putative	missense	c.6539	p.P2180L	0.000	superfamily_RNaseH-like_dom	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_RNaseH-like_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1	-	-	23	0	0.00	12	5	29.41
MADD	0	genome.wustl.edu	37	11	47348351	47348351	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	47348351	47348351	G	T	SNP	MADD	ENST00000311027	human	ensembl	74_37	+1	known	missense	c.4785	p.E1595D	1.000	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	MADD	HGNC	ENSG00000110514	tier1	-	-	64	0	0.00	46	7	13.21
MADD	0	genome.wustl.edu	37	11	47306718	47306718	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	47306718	47306718	G	A	SNP	MADD	ENST00000311027	human	ensembl	74_37	+1	known	missense	c.2384	p.R795Q	1.000	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	MADD	HGNC	ENSG00000110514				39	0	0.00	25	2	7.41
MAGEE1	0	genome.wustl.edu	37	X	75650001	75650001	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	75650001	75650001	C	A	SNP	MAGEE1	ENST00000361470	human	ensembl	74_37	+1	known	missense	c.1678	p.L560M	0.019	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC	ENSG00000198934	tier1	-	-	41	0	0.00	18	12	40.00
MAGEL2	0	genome.wustl.edu	37	15	23890893	23890894	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	23890893	23890894	-	G	INS	MAGEL2	ENST00000532292	human	ensembl	74_37	-1	known	frame_shift_ins	c.188_187	p.Q63fs	0.993:0.990	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585	tier1			26	0	0.00	13	7	35.00
MAGEL2	0	genome.wustl.edu	37	15	23891049	23891049	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	23891049	23891049	G	A	SNP	MAGEL2	ENST00000532292	human	ensembl	74_37	-1	known	missense	c.32	p.A11V	0.050	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585	tier1	-	-	73	0	0.00	84	6	6.67
MAGI2	0	genome.wustl.edu	37	7	77814972	77814972	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	77814972	77814972	C	A	SNP	MAGI2	ENST00000354212	human	ensembl	74_37	-1	known	missense	c.2285	p.R762M	1.000	superfamily_PDZ	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI2	HGNC	ENSG00000187391	tier1	-	-	70	0	0.00	41	17	29.31
MALAT1	0	genome.wustl.edu	37	11	65270091	65270091	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	65270091	65270091	T	-	DEL	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.911	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562	tier1			38	0	0.00	33	7	17.50
MAN2A2	0	genome.wustl.edu	37	15	91453730	91453730	+	Splice_Site	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	91453730	91453730	G	-	DEL	MAN2A2	ENST00000360468	human	ensembl	74_37	+1	known	splice_site_del	c.1578-1	e10-1	1.000	-	-	-	no_errors	MAN2A2	HGNC	ENSG00000196547	tier1			76	0	0.00	86	10	10.42
MANSC1	0	genome.wustl.edu	37	12	12483849	12483849	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	12483849	12483849	G	A	SNP	MANSC1	ENST00000535902	human	ensembl	74_37	-1	known	silent	c.408	p.P136	0.000	NULL	pfam_MANSC_N,smart_MANSC_N,pfscan_MANSC	-	no_errors	MANSC1	HGNC	ENSG00000111261	tier1	-	-	83	0	0.00	62	4	6.06
MAP1LC3B	0	genome.wustl.edu	37	16	87436702	87436702	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	87436702	87436702	A	-	DEL	MAP1LC3B	ENST00000268607	human	ensembl	74_37	+1	known	frame_shift_del	c.377	p.*126fs	0.001	NULL	pfam_Atg8_fam,pfam_Atg12	-	no_errors	MAP1LC3B	HGNC	ENSG00000140941	tier1			73	0	0.00	60	11	15.49
MAP3K1	0	genome.wustl.edu	37	5	56177702	56177702	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	56177702	56177702	A	G	SNP	MAP3K1	ENST00000399503	human	ensembl	74_37	+1	novel	missense	c.2675	p.N892S	0.646	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Znf_RING,pfscan_Znf_SWIM,pfscan_Prot_kinase_dom	-	no_errors	MAP3K1	HGNC	ENSG00000095015	tier1	-	-	27	0	0.00	22	7	24.14
MAP3K13	0	genome.wustl.edu	37	3	185184613	185184613	+	Splice_Site	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	185184613	185184613	G	A	SNP	MAP3K13	ENST00000265026	human	ensembl	74_37	+1	known	splice_site	c.1506-1	e9-1	1.000	-	-	-	no_errors	MAP3K13	HGNC	ENSG00000073803	tier1	-	-	50	0	0.00	33	8	19.51
MAP3K2	0	genome.wustl.edu	37	2	128096511	128096511	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	128096511	128096511	T	-	DEL	MAP3K2	ENST00000344908	human	ensembl	74_37	-1	known	frame_shift_del	c.120	p.K40fs	0.721	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K2	HGNC	ENSG00000169967	tier1			37	0	0.00	32	4	11.11
MAP4K5	0	genome.wustl.edu	37	14	50901268	50901268	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	50901268	50901268	T	A	SNP	MAP4K5	ENST00000013125	human	ensembl	74_37	-1	known	missense	c.2008	p.S670C	1.000	pfam_Citron,smart_Citron	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	MAP4K5	HGNC	ENSG00000012983	tier1	-	-	43	0	0.00	20	5	20.00
MAP7	0	genome.wustl.edu	37	6	136847057	136847059	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	136847057	136847059	TCT	-	DEL	MAP7	ENST00000454590	human	ensembl	74_37	-1	known	in_frame_del	c.46_44	p.K15in_frame_del	1.000:1.000:1.000	NULL	pfam_MAP7	-	no_errors	MAP7	HGNC	ENSG00000135525	tier1			69	0	0.00	81	16	16.49
MAPK8IP3	0	genome.wustl.edu	37	16	1797089	1797089	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	1797089	1797089	C	T	SNP	MAPK8IP3	ENST00000250894	human	ensembl	74_37	+1	known	silent	c.804	p.T268	1.000	NULL	pfam_JNK/Rab-associated_protein-1_N,superfamily_WD40_repeat_dom	-	no_errors	MAPK8IP3	HGNC	ENSG00000138834	tier1	-	-	163	0	0.00	128	11	7.91
MAPK9	0	genome.wustl.edu	37	5	179691803	179691803	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	179691803	179691803	T	-	DEL	MAPK9	ENST00000452135	human	ensembl	74_37	-1	known	frame_shift_del	c.289	p.T97fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_JNK	-	no_errors	MAPK9	HGNC	ENSG00000050748	tier1			49	0	0.00	43	17	28.33
MAPKAPK2	0	genome.wustl.edu	37	1	206905942	206905942	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	206905942	206905942	C	T	SNP	MAPKAPK2	ENST00000367103	human	ensembl	74_37	+1	known	missense	c.1082	p.A361V	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAPKAPK2	HGNC	ENSG00000162889	tier1	-	-	65	0	0.00	51	4	7.27
MAPKAPK5	0	genome.wustl.edu	37	12	112304016	112304016	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	112304016	112304016	G	A	SNP	MAPKAPK5	ENST00000551404	human	ensembl	74_37	+1	known	missense	c.167	p.R56H	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAPKAPK5	HGNC	ENSG00000089022	tier1	-	-	47	0	0.00	26	18	40.91
MAPRE1	0	genome.wustl.edu	37	20	31424518	31424518	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	31424518	31424518	G	A	SNP	MAPRE1	ENST00000375571	human	ensembl	74_37	+1	known	missense	c.346	p.D116N	1.000	superfamily_CH-domain,pfscan_CH-domain	pfam_EB1_C,pfam_CH-domain,superfamily_CH-domain,superfamily_EB1_C,pfscan_CH-domain	-	no_errors	MAPRE1	HGNC	ENSG00000101367	tier1	-	-	58	0	0.00	40	10	20.00
MARCH4	0	genome.wustl.edu	37	2	217142513	217142513	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	217142513	217142513	G	A	SNP	MARCH4	ENST00000273067	human	ensembl	74_37	-1	known	silent	c.747	p.I249	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH4	HGNC	ENSG00000144583	tier1	-	-	33	0	0.00	17	5	22.73
MARCH6	0	genome.wustl.edu	37	5	10402530	10402530	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	10402530	10402530	G	A	SNP	MARCH6	ENST00000274140	human	ensembl	74_37	+1	known	missense	c.1088	p.R363H	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH6	HGNC	ENSG00000145495	tier1	-	-	69	0	0.00	60	9	13.04
MARCH7	0	genome.wustl.edu	37	2	160604680	160604680	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	160604680	160604680	T	-	DEL	MARCH7	ENST00000259050	human	ensembl	74_37	+1	known	frame_shift_del	c.879	p.S296fs	0.910	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH7	HGNC	ENSG00000136536	tier1			39	0	0.00	23	7	23.33
MARK3	0	genome.wustl.edu	37	14	103894732	103894732	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	103894732	103894732	A	-	DEL	MARK3	ENST00000429436	human	ensembl	74_37	+1	known	frame_shift_del	c.252	p.I86fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MARK3	HGNC	ENSG00000075413	tier1			68	0	0.00	61	22	26.51
MAT2B	0	genome.wustl.edu	37	5	162945388	162945389	+	RNA	DEL	TT	TT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	162945388	162945389	TT	-	DEL	MAT2B	ENST00000521838	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MAT2B	HGNC	ENSG00000038274	tier1			62	0	0.00	56	20	26.32
MATN1-AS1	0	genome.wustl.edu	37	1	31192412	31192412	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	31192412	31192412	G	T	SNP	MATN1-AS1	ENST00000414532	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MATN1-AS1	HGNC	ENSG00000186056	tier1	-	-	66	0	0.00	44	4	8.33
MATN4	0	genome.wustl.edu	37	20	43926824	43926824	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	43926824	43926824	C	T	SNP	MATN4	ENST00000372754	human	ensembl	74_37	-1	known	missense	c.1535	p.R512H	0.996	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_EGF-like_Ca-bd_dom,pfam_Matrilin_coiled-coil_trimer,smart_VWF_A,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_VWF_A	-	no_errors	MATN4	HGNC	ENSG00000124159	tier1	-	-	19	0	0.00	12	10	45.45
MAU2	0	genome.wustl.edu	37	19	19456168	19456168	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	19456168	19456168	C	T	SNP	MAU2	ENST00000262815	human	ensembl	74_37	+1	known	missense	c.1211	p.T404M	1.000	pfam_Cohesin_loading_factor,smart_TPR_repeat	pfam_Cohesin_loading_factor,smart_TPR_repeat	-	no_errors	MAU2	HGNC	ENSG00000129933	tier1	-	-	93	0	0.00	61	20	24.69
MBD2	0	genome.wustl.edu	37	18	51750459	51750459	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	51750459	51750459	G	-	DEL	MBD2	ENST00000256429	human	ensembl	74_37	-1	known	frame_shift_del	c.471	p.G158fs	1.000	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD2	HGNC	ENSG00000134046	tier1			63	0	0.00	46	8	14.81
MBD4	0	genome.wustl.edu	37	3	129155548	129155548	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	129155548	129155548	T	-	DEL	MBD4	ENST00000249910	human	ensembl	74_37	-1	known	frame_shift_del	c.939	p.E314fs	0.059	pirsf_Me_CpG-bd_MBD4	pfam_Methyl_CpG_DNA-bd,pfam_HhH-GPD_domain,superfamily_DNA-bd_dom,superfamily_DNA_glycosylase,smart_Methyl_CpG_DNA-bd,pirsf_Me_CpG-bd_MBD4,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD4	HGNC	ENSG00000129071	tier1			46	0	0.00	30	11	26.83
MBL2	0	genome.wustl.edu	37	10	54531373	54531373	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	54531373	54531373	G	T	SNP	MBL2	ENST00000373968	human	ensembl	74_37	-1	known	missense	c.23	p.P8H	0.288	NULL	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	MBL2	HGNC	ENSG00000165471	tier1	-	-	53	0	0.00	33	5	13.16
MBNL2	0	genome.wustl.edu	37	13	97995458	97995458	+	Silent	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	97995458	97995458	T	A	SNP	MBNL2	ENST00000376673	human	ensembl	74_37	+1	known	silent	c.528	p.T176	0.674	smart_Znf_CCCH	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	MBNL2	HGNC	ENSG00000139793	tier1	-	-	84	0	0.00	65	4	5.80
MCAM	0	genome.wustl.edu	37	11	119184029	119184029	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	119184029	119184029	C	T	SNP	MCAM	ENST00000392814	human	ensembl	74_37	-1	known	missense	c.37	p.V13I	0.000	NULL	pfam_Immunoglobulin,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MCAM	HGNC	ENSG00000076706	tier1	-	-	45	0	0.00	24	15	38.46
MCC	0	genome.wustl.edu	37	5	112478960	112478960	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	112478960	112478960	G	A	SNP	MCC	ENST00000302475	human	ensembl	74_37	-1	known	missense	c.269	p.A90V	0.997	NULL	pfam_USH1C-bd_PDZ_domain,superfamily_tRNA-bd_arm	-	no_errors	MCC	HGNC	ENSG00000171444	tier1	-	-	31	0	0.00	29	6	17.14
MCCC1	0	genome.wustl.edu	37	3	182804530	182804530	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	182804530	182804530	T	C	SNP	MCCC1	ENST00000265594	human	ensembl	74_37	-1	known	missense	c.320	p.Y107C	1.000	pfam_CarbamoylP_synth_lsu_N,superfamily_PreATP-grasp_dom,pfscan_Biotin_carboxylation_dom	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,pfam_ATP-grasp_carboxylate-amine,pfam_ATP-grasp_RimK-type,pfam_ATP-grasp_DUF201-type,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_Biotin_lipoyl	-	no_errors	MCCC1	HGNC	ENSG00000078070	tier1	rs144872258	-	71	0	0.00	75	5	6.17
MCM8	0	genome.wustl.edu	37	20	5953318	5953318	+	Silent	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	5953318	5953318	A	C	SNP	MCM8	ENST00000378886	human	ensembl	74_37	+1	known	silent	c.1320	p.S440	0.088	smart_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,pfam_Mg_chelatse_chII,pfam_ATPase_dyneun-rel_AAA,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase,smart_AAA+_ATPase,pfscan_MCM_DNA-dep_ATPase,prints_MCM_DNA-dep_ATPase	-	no_errors	MCM8	HGNC	ENSG00000125885	tier1	-	-	9	0	0.00	9	5	35.71
MCOLN1	0	genome.wustl.edu	37	19	7594070	7594072	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	7594070	7594072	CTT	-	DEL	MCOLN1	ENST00000264079	human	ensembl	74_37	+1	known	in_frame_del	c.1218_1220	p.F408in_frame_del	0.997:1.000:1.000	pfam_PKD1_2_channel	pfam_PKD1_2_channel,superfamily_Glycoside_hydrolase_SF	-	no_errors	MCOLN1	HGNC	ENSG00000090674	tier1			47	0	0.00	18	8	30.77
MCPH1	0	genome.wustl.edu	37	8	6289044	6289044	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	6289044	6289044	T	C	SNP	MCPH1	ENST00000344683	human	ensembl	74_37	+1	known	silent	c.258	p.I86	0.001	superfamily_BRCT_dom,pfscan_BRCT_dom	pfam_Microcephalin,pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom,prints_BRCA1	-	no_errors	MCPH1	HGNC	ENSG00000147316	tier1	-	-	39	0	0.00	30	11	26.83
MCTP1	0	genome.wustl.edu	37	5	94050578	94050578	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	94050578	94050578	T	-	DEL	MCTP1	ENST00000515393	human	ensembl	74_37	-1	known	frame_shift_del	c.2624	p.K875fs	1.000	pfam_PRibTrfase_C	pfam_C2_dom,pfam_PRibTrfase_C,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_C2_dom	-	no_errors	MCTP1	HGNC	ENSG00000175471	tier1			49	0	0.00	36	9	20.00
ME2	0	genome.wustl.edu	37	18	48450472	48450472	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	48450472	48450472	G	A	SNP	ME2	ENST00000321341	human	ensembl	74_37	+1	known	missense	c.1061	p.R354Q	0.689	pfam_Malic_NAD-bd,smart_Malic_NAD-bd	pfam_Malic_NAD-bd,pfam_Malic_N,smart_Malic_NAD-bd,prints_Malic_OxRdtase	-	no_errors	ME2	HGNC	ENSG00000082212	tier1	-	-	39	0	0.00	33	6	15.38
MED12L	0	genome.wustl.edu	37	3	151095801	151095801	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	151095801	151095801	T	A	SNP	MED12L	ENST00000474524	human	ensembl	74_37	+1	known	missense	c.4213	p.S1405T	1.000	NULL	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12,pfam_Mediator_Med12_catenin-bd	-	no_errors	MED12L	HGNC	ENSG00000144893	tier1	-	-	51	0	0.00	34	6	15.00
MED25	0	genome.wustl.edu	37	19	50333113	50333113	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	50333113	50333113	C	-	DEL	MED25	ENST00000312865	human	ensembl	74_37	+1	known	frame_shift_del	c.596	p.P201fs	0.380	pfam_Mediator_Med25_VWA	pfam_Mediator_Med25_VWA,pfam_Mediator_Med25,pfam_Mediator_Med25_SD1,pfam_Mediator_Med25_NR-box	-	no_errors	MED25	HGNC	ENSG00000104973	tier1			52	0	0.00	52	17	24.64
MEDAG	0	genome.wustl.edu	37	13	31480852	31480852	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	31480852	31480852	G	-	DEL	MEDAG	ENST00000380482	human	ensembl	74_37	+1	known	frame_shift_del	c.200	p.G69fs	0.590	NULL	NULL	-	no_errors	MEDAG	HGNC	ENSG00000102802	tier1			10	0	0.00	5	5	50.00
MEFV	0	genome.wustl.edu	37	16	3304660	3304660	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	3304660	3304660	C	T	SNP	MEFV	ENST00000219596	human	ensembl	74_37	-1	known	silent	c.408	p.G136	0.000	NULL	pfam_DAPIN,pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,superfamily_DEATH-like_dom,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_DAPIN,pfscan_Znf_B-box,prints_Butyrophylin	-	no_errors	MEFV	HGNC	ENSG00000103313	tier1	-	-	41	0	0.00	25	8	24.24
MEGF6	0	genome.wustl.edu	37	1	3410403	3410404	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	3410403	3410404	-	C	INS	MEGF6	ENST00000356575	human	ensembl	74_37	-1	known	frame_shift_ins	c.4319_4318	p.A1440fs	0.000:0.000	smart_EG-like_dom,smart_EGF_laminin	pfam_EGF_laminin,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF6	HGNC	ENSG00000162591	tier1			66	0	0.00	40	23	36.51
MEGF8	0	genome.wustl.edu	37	19	42840447	42840447	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	42840447	42840447	C	-	DEL	MEGF8	ENST00000251268	human	ensembl	74_37	+1	known	frame_shift_del	c.1193	p.S400fs	0.982	NULL	pfam_CUB_dom,pfam_EGF_laminin,pfam_Plexin_repeat,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_CUB_dom,smart_EG-like_dom,smart_Plexin-like_fold,smart_EGF-like_Ca-bd_dom,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin	-	no_errors	MEGF8	HGNC	ENSG00000105429	tier1			67	0	0.00	51	9	15.00
MEIOB	0	genome.wustl.edu	37	16	1918176	1918176	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	1918176	1918176	T	-	DEL	MEIOB	ENST00000325962	human	ensembl	74_37	-1	known	frame_shift_del	c.1	p.M1fs	1.000	NULL	superfamily_NA-bd_OB-fold	-	no_errors	MEIOB	HGNC	ENSG00000162039	tier1			63	0	0.00	59	20	25.32
MESP2	0	genome.wustl.edu	37	15	90320197	90320197	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	90320197	90320197	G	A	SNP	MESP2	ENST00000341735	human	ensembl	74_37	+1	known	silent	c.609	p.G203	0.122	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MESP2	HGNC	ENSG00000188095				12	0	0.00	5	7	58.33
METTL14	0	genome.wustl.edu	37	4	119626837	119626837	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	119626837	119626837	T	C	SNP	METTL14	ENST00000388822	human	ensembl	74_37	+1	known	silent	c.927	p.V309	0.436	pfam_MT-A70-like,pfscan_MT-A70-like	pfam_MT-A70-like,pfscan_MT-A70-like	-	no_errors	METTL14	HGNC	ENSG00000145388	tier1	-	-	61	0	0.00	44	5	10.20
METTL22	0	genome.wustl.edu	37	16	8729076	8729076	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	8729076	8729076	C	A	SNP	METTL22	ENST00000381920	human	ensembl	74_37	+1	known	missense	c.607	p.L203I	1.000	pfam_Nicotinamide_N-MeTfrase-like	pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	METTL22	HGNC	ENSG00000067365	tier1	-	-	39	0	0.00	29	7	19.44
METTL25	0	genome.wustl.edu	37	12	82792803	82792803	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	82792803	82792803	A	G	SNP	METTL25	ENST00000248306	human	ensembl	74_37	+1	known	missense	c.761	p.N254S	0.000	NULL	NULL	-	no_errors	METTL25	HGNC	ENSG00000127720				31	0	0.00	26	4	13.33
MFF	0	genome.wustl.edu	37	2	228195474	228195474	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	228195474	228195474	G	A	SNP	MFF	ENST00000353339	human	ensembl	74_37	+1	known	silent	c.171	p.P57	0.960	pfam_FATE/Miff/Tango-11	pfam_FATE/Miff/Tango-11	-	no_errors	MFF	HGNC	ENSG00000168958				48	0	0.00	35	3	7.89
MFI2	0	genome.wustl.edu	37	3	196737650	196737650	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	196737650	196737650	C	T	SNP	MFI2	ENST00000296350	human	ensembl	74_37	-1	known	missense	c.1249	p.A417T	0.023	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin	pfam_Transferrin_fam,smart_Transferrin_fam,pirsf_Transferrin,prints_Transferrin_fam	-	no_errors	MFI2	HGNC	ENSG00000163975	tier1	rs151109969	-	138	0	0.00	125	22	14.86
MFN2	0	genome.wustl.edu	37	1	12062115	12062115	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	12062115	12062115	T	A	SNP	MFN2	ENST00000235329	human	ensembl	74_37	+1	known	missense	c.1115	p.V372D	0.465	superfamily_P-loop_NTPase	pfam_Fzo/mitofusin_HR2,pfam_Dynamin_GTPase,superfamily_P-loop_NTPase	-	no_errors	MFN2	HGNC	ENSG00000116688	tier1	-	-	72	0	0.00	47	19	28.79
MFSD12	0	genome.wustl.edu	37	19	3544900	3544900	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	3544900	3544900	G	T	SNP	MFSD12	ENST00000398558	human	ensembl	74_37	-1	known	missense	c.1327	p.H443N	1.000	superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD12	HGNC	ENSG00000161091	tier1	-	-	44	0	0.00	24	12	33.33
MFSD3	0	genome.wustl.edu	37	8	145736024	145736024	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	145736024	145736024	G	-	DEL	MFSD3	ENST00000301327	human	ensembl	74_37	+1	known	frame_shift_del	c.874	p.G293fs	0.955	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD3	HGNC	ENSG00000167700	tier1			61	0	0.00	60	8	11.76
MGAT4B	0	genome.wustl.edu	37	5	179225976	179225976	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	179225976	179225976	G	A	SNP	MGAT4B	ENST00000337755	human	ensembl	74_37	-1	known	missense	c.1340	p.A447V	0.992	NULL	pfam_Glyco_transf_54	-	no_errors	MGAT4B	HGNC	ENSG00000161013	tier1	-	-	51	0	0.00	26	11	28.95
MGAT5B	0	genome.wustl.edu	37	17	74936521	74936521	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	74936521	74936521	C	0	DEL	MGAT5B	ENST00000428789	human	ensembl	74_37	+1	known	frame_shift_del	c.1649	p.L552fs	1.000	NULL	superfamily_PyrdxlP-dep_Trfase	-	no_errors	MGAT5B	HGNC	ENSG00000167889				37	0	0.00	33	5	13.16
MGRN1	0	genome.wustl.edu	37	16	4727318	4727318	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	4727318	4727318	A	-	DEL	MGRN1	ENST00000588015	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	MGRN1	HGNC	ENSG00000102858	tier1			19	0	0.00	20	7	25.93
MICAL1	0	genome.wustl.edu	37	6	109767434	109767434	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	109767434	109767434	G	T	SNP	MICAL1	ENST00000368952	human	ensembl	74_37	-1	known	missense	c.2543	p.P848H	0.155	NULL	pfam_DUF3585,pfam_CH-domain,pfam_Znf_LIM,pfam_mOase_FAD-bd,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICAL1	HGNC	ENSG00000135596	tier1	-	-	176	0	0.00	124	41	24.85
MICU3	0	genome.wustl.edu	37	8	16948074	16948074	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	16948074	16948074	A	G	SNP	MICU3	ENST00000318063	human	ensembl	74_37	+1	known	missense	c.869	p.Y290C	1.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MICU3	HGNC	ENSG00000155970	tier1	-	-	63	0	0.00	78	15	16.13
MIER2	0	genome.wustl.edu	37	19	308584	308584	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	308584	308584	C	T	SNP	MIER2	ENST00000264819	human	ensembl	74_37	-1	known	missense	c.1191	p.M397I	0.001	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	MIER2	HGNC	ENSG00000105556	tier1	-	-	98	0	0.00	80	13	13.98
MIR1208	0	genome.wustl.edu	37	8	129162390	129162390	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	129162390	129162390	G	A	SNP	MIR1208	ENST00000408334	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	MIR1208	HGNC	ENSG00000221261	tier1	-	-	35	0	0.00	17	8	32.00
MIR1289-1	0	genome.wustl.edu	37	20	34041840	34041840	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	34041840	34041840	G	A	SNP	MIR1289-1	ENST00000408836	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	MIR1289-1	HGNC	ENSG00000221763	tier1	-	-	67	0	0.00	40	6	13.04
MIR1293	0	genome.wustl.edu	37	12	50627995	50627997	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	50627995	50627997	TTT	-	DEL	MIR1293	ENST00000408677	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.541:0.545:0.544	-	-	-	no_errors	MIR1293	HGNC	ENSG00000221604	tier1			64	0	0.00	51	8	13.56
MIR22HG	0	genome.wustl.edu	37	17	1615614	1615614	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	1615614	1615614	A	G	SNP	MIR22HG	ENST00000334146	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	MIR22HG	HGNC	ENSG00000186594	tier1	-	-	46	0	0.00	38	15	28.30
MIR3131	0	genome.wustl.edu	37	2	219923425	219923425	+	RNA	SNP	C	C	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	219923425	219923425	C	G	SNP	MIR3131	ENST00000583592	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	MIR3131	HGNC	ENSG00000264755	tier1	-	-	59	0	0.00	54	19	26.03
MIR411	0	genome.wustl.edu	37	14	101489709	101489709	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	101489709	101489709	A	G	SNP	MIR411	ENST00000362239	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR411	HGNC	ENSG00000199109	tier1	-	-	47	0	0.00	39	14	26.42
MIR4639	0	genome.wustl.edu	37	6	16141811	16141811	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	16141811	16141811	T	C	SNP	MIR4639	ENST00000584938	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR4639	HGNC	ENSG00000263712	tier1	-	-	24	0	0.00	11	4	26.67
MIR497HG	0	genome.wustl.edu	37	17	6921298	6921298	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	6921298	6921298	A	G	SNP	MIR497HG	ENST00000385056	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR497HG	HGNC	ENSG00000267532	tier1	-	-	49	0	0.00	20	9	31.03
MIR503HG	0	genome.wustl.edu	37	X	133680601	133680601	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	133680601	133680601	G	A	SNP	MIR503HG	ENST00000414769	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR503HG	HGNC	ENSG00000223749	tier1	-	-	88	0	0.00	44	9	16.98
MIR620	0	genome.wustl.edu	37	12	116586414	116586415	+	RNA	INS	-	-	TA			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	116586414	116586415	-	TA	INS	MIR620	ENST00000385232	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MIR620	HGNC	ENSG00000207967	tier1			73	0	0.00	50	8	13.79
MIR637	0	genome.wustl.edu	37	19	3961429	3961429	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	3961429	3961429	G	A	SNP	MIR637	ENST00000385000	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR637	HGNC	ENSG00000207733	tier1	-	-	97	0	0.00	93	5	5.10
MIR758	0	genome.wustl.edu	37	14	101492444	101492444	+	RNA	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	101492444	101492444	C	-	DEL	MIR758	ENST00000390227	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR758	HGNC	ENSG00000211582	tier1			47	0	0.00	27	12	30.77
MKI67IP	0	genome.wustl.edu	37	2	122486069	122486069	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	122486069	122486069	G	A	SNP	MKI67IP	ENST00000285814	human	ensembl	74_37	-1	known	missense	c.608	p.T203M	0.000	NULL	pfam_hNIFK_FHA_Ki67_binding,pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	MKI67IP	HGNC	ENSG00000155438	tier1	-	-	42	0	0.00	33	17	34.00
MKL2	0	genome.wustl.edu	37	16	14346300	14346300	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	14346300	14346300	C	-	DEL	MKL2	ENST00000341243	human	ensembl	74_37	+1	known	frame_shift_del	c.2611	p.R873fs	1.000	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL2	HGNC	ENSG00000186260	tier1			50	0	0.00	36	6	14.29
MKLN1	0	genome.wustl.edu	37	7	131172537	131172538	+	RNA	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	131172537	131172538	-	T	INS	MKLN1	ENST00000498778	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.734:0.731	-	-	-	no_errors	MKLN1	HGNC	ENSG00000128585	tier1			61	0	0.00	31	4	11.43
MLLT4	0	genome.wustl.edu	37	6	168347574	168347574	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	168347574	168347574	C	T	SNP	MLLT4	ENST00000366806	human	ensembl	74_37	+1	known	silent	c.3525	p.N1175	0.944	NULL	pfam_Ras-assoc,pfam_Dil_domain,pfam_PDZ,pfam_FHA_dom,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_FHA_dom,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	-	no_errors	MLLT4	HGNC	ENSG00000130396	tier1	-	-	63	0	0.00	66	5	7.04
MLXIP	0	genome.wustl.edu	37	12	122618567	122618567	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	122618567	122618567	C	-	DEL	MLXIP	ENST00000377037	human	ensembl	74_37	+1	known	frame_shift_del	c.535	p.D181fs	0.000	NULL	NULL	-	no_errors	MLXIP	HGNC	ENSG00000175727	tier1			60	0	0.00	38	7	15.56
MMP1	0	genome.wustl.edu	37	11	102666262	102666262	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	102666262	102666262	A	G	SNP	MMP1	ENST00000315274	human	ensembl	74_37	-1	known	silent	c.702	p.A234	0.933	pfam_Pept_M10_metallopeptidase,smart_Peptidase_Metallo,pirsf_Pept_M10A_Metazoans,prints_Pept_M10A	pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans,prints_Pept_M10A	-	no_errors	MMP1	HGNC	ENSG00000196611	tier1	-	-	50	0	0.00	33	13	28.26
MMP8	0	genome.wustl.edu	37	11	102586163	102586163	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	102586163	102586163	A	T	SNP	MMP8	ENST00000236826	human	ensembl	74_37	-1	known	missense	c.908	p.F303Y	1.000	pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans	pfam_Pept_M10_metallopeptidase,pfam_Hemopexin-like_repeat,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_Hemopexin-like_repeat,pirsf_Pept_M10A_Metazoans,prints_Pept_M10A	-	no_errors	MMP8	HGNC	ENSG00000118113	tier1	-	-	29	0	0.00	32	4	11.11
MMP9	0	genome.wustl.edu	37	20	44640819	44640819	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	44640819	44640819	C	T	SNP	MMP9	ENST00000372330	human	ensembl	74_37	+1	known	silent	c.1041	p.C347	0.998	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,superfamily_Kringle-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,pfscan_FN_type2_col-bd	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_PT,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP9	HGNC	ENSG00000100985	tier1	-	-	41	0	0.00	26	10	27.03
MMS22L	0	genome.wustl.edu	37	6	97676826	97676826	+	Silent	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	97676826	97676826	T	A	SNP	MMS22L	ENST00000275053	human	ensembl	74_37	-1	known	silent	c.1983	p.R661	0.997	NULL	superfamily_ARM-type_fold	-	no_errors	MMS22L	HGNC	ENSG00000146263	tier1	-	-	42	0	0.00	42	8	16.00
MOB1A	0	genome.wustl.edu	37	2	74392409	74392409	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	74392409	74392409	A	G	SNP	MOB1A	ENST00000396049	human	ensembl	74_37	-1	known	silent	c.345	p.I115	1.000	pfam_Mob1_phocein,superfamily_Mob1_phocein	pfam_Mob1_phocein,superfamily_Mob1_phocein	-	no_errors	MOB1A	HGNC	ENSG00000114978	tier1	-	-	73	0	0.00	32	16	33.33
MOCS2	0	genome.wustl.edu	37	5	52394449	52394449	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	52394449	52394449	A	-	DEL	MOCS2	ENST00000396954	human	ensembl	74_37	-1	known	frame_shift_del	c.550	p.W184fs	1.000	superfamily_Mopterin_biosynth_MoaE	pfam_Mopterin_biosynth_MoaE,superfamily_Mopterin_biosynth_MoaE	-	no_errors	MOCS2	HGNC	ENSG00000164172	tier1			50	0	0.00	54	15	21.74
MORC1	0	genome.wustl.edu	37	3	108773580	108773580	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	108773580	108773580	C	T	SNP	MORC1	ENST00000232603	human	ensembl	74_37	-1	known	missense	c.1325	p.G442D	0.909	NULL	pfam_Znf_CW,superfamily_HATPase_ATP-bd,pfscan_Znf_CW	-	no_errors	MORC1	HGNC	ENSG00000114487	tier1	-	-	48	0	0.00	40	9	18.37
MORC1	0	genome.wustl.edu	37	3	108812346	108812346	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	108812346	108812346	C	A	SNP	MORC1	ENST00000232603	human	ensembl	74_37	-1	known	missense	c.626	p.G209V	1.000	superfamily_HATPase_ATP-bd	pfam_Znf_CW,superfamily_HATPase_ATP-bd,pfscan_Znf_CW	-	no_errors	MORC1	HGNC	ENSG00000114487	tier1	-	-	39	0	0.00	28	12	30.00
MOSPD1	0	genome.wustl.edu	37	X	134033227	134033228	+	RNA	DEL	TT	TT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	134033227	134033228	TT	-	DEL	MOSPD1	ENST00000462060	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	MOSPD1	HGNC	ENSG00000101928	tier1			78	0	0.00	33	15	31.25
MPND	0	genome.wustl.edu	37	19	4357332	4357332	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	4357332	4357332	T	C	SNP	MPND	ENST00000262966	human	ensembl	74_37	+1	known	missense	c.1079	p.L360P	1.000	pfam_JAB_MPN_dom	pfam_JAB_MPN_dom	-	no_errors	MPND	HGNC	ENSG00000008382				58	0	0.00	40	3	6.98
MPP5	0	genome.wustl.edu	37	14	67787969	67787969	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	67787969	67787969	G	A	SNP	MPP5	ENST00000261681	human	ensembl	74_37	+1	known	missense	c.1733	p.R578H	1.000	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_GK/Ca_channel_bsu,pfam_L27_N,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,pfam_L27_C,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	MPP5	HGNC	ENSG00000072415	tier1	-	-	52	0	0.00	54	14	20.59
MPP6	0	genome.wustl.edu	37	7	24718836	24718836	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	24718836	24718836	G	T	SNP	MPP6	ENST00000222644	human	ensembl	74_37	+1	known	missense	c.1201	p.A401S	1.000	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_GK/Ca_channel_bsu,pfam_L27_C,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	MPP6	HGNC	ENSG00000105926	tier1	-	-	77	0	0.00	77	10	11.49
MPPED1	0	genome.wustl.edu	37	22	43870648	43870648	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	43870648	43870648	G	A	SNP	MPPED1	ENST00000538182	human	ensembl	74_37	+1	known	missense	c.538	p.A180T	1.000	pfam_PEstase_dom	pfam_PEstase_dom	-	no_errors	MPPED1	HGNC	ENSG00000186732	tier1	-	-	39	0	0.00	14	10	41.67
MPV17L2	0	genome.wustl.edu	37	19	18305819	18305819	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	18305819	18305819	C	0	DEL	MPV17L2	ENST00000599612	human	ensembl	74_37	+1	known	frame_shift_del	c.487	p.Q165fs	1.000	pfam_Mpv17_PMP22	pfam_Mpv17_PMP22	-	no_errors	MPV17L2	HGNC	ENSG00000254858				90	0	0.00	76	8	9.52
MRGPRX1	0	genome.wustl.edu	37	11	18956334	18956334	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	18956334	18956334	T	C	SNP	MRGPRX1	ENST00000526914	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.002	-	-	-	no_errors	MRGPRX1	HGNC	ENSG00000170255	tier1	-	-	107	0	0.00	74	32	29.91
MRGPRX3	0	genome.wustl.edu	37	11	18159395	18159395	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	18159395	18159395	G	A	SNP	MRGPRX3	ENST00000396275	human	ensembl	74_37	+1	known	missense	c.646	p.V216M	0.999	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	MRGPRX3	HGNC	ENSG00000179826	tier1	-	-	69	0	0.00	50	12	19.35
MRI1	0	genome.wustl.edu	37	19	13879210	13879210	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	13879210	13879210	A	G	SNP	MRI1	ENST00000319545	human	ensembl	74_37	+1	known	missense	c.409	p.T137A	0.006	NULL	pfam_IF-2B-related,tigrfam_Initiation_fac_2B_a/b/d	-	no_errors	MRI1	HGNC	ENSG00000037757	tier1	-	-	60	0	0.00	44	10	18.52
MROH2B	0	genome.wustl.edu	37	5	41038980	41038981	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	41038980	41038981	-	A	INS	MROH2B	ENST00000399564	human	ensembl	74_37	-1	known	frame_shift_ins	c.2072_2071	p.S691fs	0.999:0.999	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH2B	HGNC	ENSG00000171495	tier1			23	0	0.00	16	6	27.27
MROH7-TTC4	0	genome.wustl.edu	37	1	55118660	55118660	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	55118660	55118660	C	-	DEL	MROH7-TTC4	ENST00000414150	human	ensembl	74_37	+1	known	frame_shift_del	c.61	p.S23fs	0.001	NULL	superfamily_ARM-type_fold	-	no_errors	MROH7-TTC4	HGNC	ENSG00000271723	tier1			28	0	0.00	24	6	20.00
MROH7-TTC4	0	genome.wustl.edu	37	1	55136582	55136582	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	55136582	55136582	G	T	SNP	MROH7-TTC4	ENST00000414150	human	ensembl	74_37	+1	known	missense	c.1579	p.A527S	0.358	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH7-TTC4	HGNC	ENSG00000271723	tier1	-	-	17	0	0.00	18	7	28.00
MRPL37	0	genome.wustl.edu	37	1	54670828	54670828	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	54670828	54670828	C	T	SNP	MRPL37	ENST00000360840	human	ensembl	74_37	+1	known	missense	c.484	p.R162C	0.984	pfam_Ribosomal_L37/S30	pfam_Ribosomal_L37/S30	-	no_errors	MRPL37	HGNC	ENSG00000116221	tier1	rs201357587	-	43	0	0.00	23	9	28.12
MRPL4	0	genome.wustl.edu	37	19	10369991	10369991	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	10369991	10369991	G	A	SNP	MRPL4	ENST00000393733	human	ensembl	74_37	+1	putative	missense	c.883	p.A295T	0.000	NULL	pfam_Ribosomal_L4/L1e,superfamily_Ribosomal_L4_dom,tigrfam_Ribosomal_L4/L1e_bac-type	-	no_errors	MRPL4	HGNC	ENSG00000105364	tier1	-	-	46	0	0.00	31	10	24.39
MRPL4	0	genome.wustl.edu	37	19	10370444	10370445	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	10370444	10370445	0	C	INS	MRPL4	ENST00000253099	human	ensembl	74_37	+1	known	frame_shift_ins	c.891_892	p.H298fs	0.000:0.001	NULL	pfam_Ribosomal_L4/L1e,superfamily_Ribosomal_L4_dom,tigrfam_Ribosomal_L4/L1e_bac-type	-	no_errors	MRPL4	HGNC	ENSG00000105364				111	0	0.00	96	8	7.69
MRPL45	0	genome.wustl.edu	37	17	36455359	36455359	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	36455359	36455359	G	A	SNP	MRPL45	ENST00000312513	human	ensembl	74_37	+1	known	missense	c.287	p.R96H	0.912	NULL	pfam_Tim44-like_dom,smart_Tim44-like_dom	-	no_errors	MRPL45	HGNC	ENSG00000174100	tier1	rs201673456	-	54	0	0.00	57	5	8.06
MRPS27	0	genome.wustl.edu	37	5	71528293	71528293	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	71528293	71528293	G	T	SNP	MRPS27	ENST00000513900	human	ensembl	74_37	-1	known	missense	c.610	p.L204M	1.000	pfam_Ribosomal_S27_mit	pfam_Ribosomal_S27_mit	-	no_errors	MRPS27	HGNC	ENSG00000113048	tier1	-	-	41	0	0.00	23	3	11.54
MRRF	0	genome.wustl.edu	37	9	125047541	125047541	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	125047541	125047541	T	C	SNP	MRRF	ENST00000344641	human	ensembl	74_37	+1	known	missense	c.434	p.L145S	1.000	pfam_Ribosome_recyc_fac_dom,superfamily_Ribosome_recyc_fac_dom	pfam_Ribosome_recyc_fac_dom,superfamily_Ribosome_recyc_fac_dom	-	no_errors	MRRF	HGNC	ENSG00000148187				34	0	0.00	36	3	7.69
MRTO4	0	genome.wustl.edu	37	1	19585041	19585041	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	19585041	19585041	C	T	SNP	MRTO4	ENST00000330263	human	ensembl	74_37	+1	known	silent	c.564	p.R188	0.000	NULL	pfam_Ribosomal_L10/acidic_P0	-	no_errors	MRTO4	HGNC	ENSG00000053372	tier1	-	-	69	0	0.00	29	18	38.30
MSH6	0	genome.wustl.edu	37	2	48032796	48032796	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	48032796	48032796	G	A	SNP	MSH6	ENST00000234420	human	ensembl	74_37	+1	known	missense	c.3596	p.S1199N	1.000	pfam_DNA_mismatch_repair_MutS_C,superfamily_P-loop_NTPase,smart_DNA_mismatch_repair_MutS_C,pirsf_DNA_mismatch_repair_Msh6	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_core,pfam_PWWP_dom,pfam_DNA_mismatch_repair_MutS_clamp,pfam_DNA_mmatch_repair_MutS_con_dom,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_PWWP_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C,pirsf_DNA_mismatch_repair_Msh6,pfscan_PWWP_dom	-	no_errors	MSH6	HGNC	ENSG00000116062	tier1	-	-	187	0	0.00	137	28	16.97
MSI1	0	genome.wustl.edu	37	12	120795666	120795666	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	120795666	120795666	C	T	SNP	MSI1	ENST00000257552	human	ensembl	74_37	-1	known	missense	c.487	p.V163M	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	MSI1	HGNC	ENSG00000135097	tier1	-	-	25	0	0.00	20	8	28.57
MSL1	0	genome.wustl.edu	37	17	38282534	38282535	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	38282534	38282535	AG	-	DEL	MSL1	ENST00000398532	human	ensembl	74_37	+1	known	frame_shift_del	c.867_868	p.E292fs	1.000:1.000	NULL	NULL	-	no_errors	MSL1	HGNC	ENSG00000188895	tier1			53	0	0.00	38	20	34.48
MSL3	0	genome.wustl.edu	37	X	11783863	11783863	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	11783863	11783863	G	A	SNP	MSL3	ENST00000337339	human	ensembl	74_37	+1	known	missense	c.1186	p.G396R	0.000	NULL	pfam_MRG_dom,pfam_Tudor-knot,superfamily_Chromodomain-like,smart_Chromo_domain/shadow	-	no_errors	MSL3	HGNC	ENSG00000005302	tier1	-	-	45	0	0.00	31	5	13.89
MSLNL	0	genome.wustl.edu	37	16	830602	830602	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	830602	830602	C	T	SNP	MSLNL	ENST00000293892	human	ensembl	74_37	-1	known	silent	c.399	p.A133	0.000	NULL	pfam_Mesothelin	-	no_errors	MSLNL	HGNC	ENSG00000162006	tier1	-	-	80	0	0.00	64	14	17.95
MSR1	0	genome.wustl.edu	37	8	15978079	15978079	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	15978079	15978079	C	T	SNP	MSR1	ENST00000262101	human	ensembl	74_37	-1	known	missense	c.1070	p.G357D	0.621	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	pfam_SRCR,pfam_Macro_scav_rcpt,pfam_Collagen,superfamily_Srcr_rcpt-rel,superfamily_STAT_TF_coiled-coil,smart_Srcr_rcpt-rel,prints_Macro_scav_rcpt,prints_SRCR,pfscan_SRCR	-	no_errors	MSR1	HGNC	ENSG00000038945				44	0	0.00	48	6	11.11
MST1R	0	genome.wustl.edu	37	3	49932626	49932626	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	49932626	49932626	G	A	SNP	MST1R	ENST00000296474	human	ensembl	74_37	-1	known	missense	c.3245	p.T1082I	0.302	pirsf_Tyr_kinase_HGF/MSP_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_IPT,superfamily_Semap_dom,superfamily_Kinase-like_dom,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Semap_dom,pfscan_Prot_kinase_dom	-	no_errors	MST1R	HGNC	ENSG00000164078	tier1	-	-	26	0	0.00	34	4	10.53
MST1R	0	genome.wustl.edu	37	3	49935496	49935496	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	49935496	49935496	C	T	SNP	MST1R	ENST00000296474	human	ensembl	74_37	-1	known	missense	c.1868	p.S623N	0.025	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_IPT,superfamily_Ig_E-set,smart_IPT	pirsf_Tyr_kinase_HGF/MSP_rcpt,pfam_Semap_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_IPT,superfamily_Semap_dom,superfamily_Kinase-like_dom,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Semap_dom,pfscan_Prot_kinase_dom	-	no_errors	MST1R	HGNC	ENSG00000164078				32	0	0.00	31	3	8.82
MSTO1	0	genome.wustl.edu	37	1	155583470	155583470	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	155583470	155583470	C	T	SNP	MSTO1	ENST00000245564	human	ensembl	74_37	+1	known	missense	c.1411	p.P471S	0.937	NULL	pfam_Misato_II_tubulin-like,pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase	-	no_errors	MSTO1	HGNC	ENSG00000125459	tier1	-	-	63	0	0.00	46	13	22.03
MT-ND5	0	genome.wustl.edu	37	MT	13339	13339	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	MT	13339	13339	T	C	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.1003	p.F335L	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1	-	-	29	0	0.00	8	2	20.00
MTA1	0	genome.wustl.edu	37	14	105929561	105929561	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	105929561	105929561	A	G	SNP	MTA1	ENST00000331320	human	ensembl	74_37	+1	known	missense	c.983	p.Y328C	1.000	superfamily_Homeodomain-like,smart_SANT/Myb	pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	MTA1	HGNC	ENSG00000182979	tier1	-	-	55	0	0.00	29	17	36.96
MTA1	0	genome.wustl.edu	37	14	105936238	105936239	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	105936238	105936239	-	G	INS	MTA1	ENST00000331320	human	ensembl	74_37	+1	known	frame_shift_ins	c.1906_1907	p.S639fs	0.998:0.999	NULL	pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	MTA1	HGNC	ENSG00000182979	tier1			84	0	0.00	71	18	20.22
MTERFD1	0	genome.wustl.edu	37	8	97263175	97263176	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	97263175	97263176	-	T	INS	MTERFD1	ENST00000287025	human	ensembl	74_37	-1	known	frame_shift_ins	c.636_635	p.N212fs	0.917:1.000	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	pfam_Mit_transcrip_term-rel,smart_Mit_transcrip_term-rel	-	no_errors	MTERFD1	HGNC	ENSG00000156469	tier1			71	0	0.00	65	27	29.35
MTF2	0	genome.wustl.edu	37	1	93602676	93602677	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	93602676	93602677	AA	-	DEL	MTF2	ENST00000467953	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:0.997	-	-	-	no_errors	MTF2	HGNC	ENSG00000143033	tier1			71	0	0.00	78	28	26.42
MTIF2	0	genome.wustl.edu	37	2	55476628	55476628	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	55476628	55476628	G	A	SNP	MTIF2	ENST00000263629	human	ensembl	74_37	-1	known	missense	c.884	p.A295V	1.000	pfam_EF_GTP-bd_dom,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,tigrfam_Small_GTP-bd_dom	pfam_EF_GTP-bd_dom,pfam_TIF_IF2_dom3,pfam_Transl_elong_EFTu/EF1A_2,pfam_MIRO-like,pfam_GTP_binding_domain,pfam_Small_GTPase,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,superfamily_TIF_IF2_dom3,superfamily_Transl_B-barrel,tigrfam_Small_GTP-bd_dom	-	no_errors	MTIF2	HGNC	ENSG00000085760	tier1	-	-	71	0	0.00	62	20	24.39
MTO1	0	genome.wustl.edu	37	6	74183265	74183265	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	74183265	74183265	G	A	SNP	MTO1	ENST00000415954	human	ensembl	74_37	+1	known	missense	c.713	p.G238E	1.000	pfam_GIDA-rel,tigrfam_GidA	pfam_GIDA-rel,pfam_FAD_bind_dom,prints_FAD_pyr_nucl-diS_OxRdtase,tigrfam_GidA	-	no_errors	MTO1	HGNC	ENSG00000135297	tier1	-	-	130	0	0.00	70	6	7.89
MTR	0	genome.wustl.edu	37	1	236972027	236972027	+	Silent	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	236972027	236972027	T	G	SNP	MTR	ENST00000366577	human	ensembl	74_37	+1	known	silent	c.363	p.S121	0.994	pfam_S_MeTrfase,superfamily_S_MeTrfase,pirsf_MetH,pfscan_S_MeTrfase,tigrfam_MetH	pfam_S_MeTrfase,pfam_VitB12-dep_Met_synth_activ_dom,pfam_Pterin-binding,pfam_Cbl-bd_cap,pfam_Cobalamin-bd,superfamily_VitB12-dep_Met_synth_activ_dom,superfamily_S_MeTrfase,superfamily_Dihydropteroate_synth-like,superfamily_Cobalamin-bd,superfamily_Cbl-bd_cap,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom,pfscan_S_MeTrfase,pfscan_Pterin-binding,tigrfam_MetH	-	no_errors	MTR	HGNC	ENSG00000116984	tier1	-	-	49	0	0.00	47	6	11.32
MTR	0	genome.wustl.edu	37	1	236972037	236972037	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	236972037	236972037	G	A	SNP	MTR	ENST00000366577	human	ensembl	74_37	+1	known	missense	c.373	p.A125T	1.000	pfam_S_MeTrfase,superfamily_S_MeTrfase,pirsf_MetH,pfscan_S_MeTrfase,tigrfam_MetH	pfam_S_MeTrfase,pfam_VitB12-dep_Met_synth_activ_dom,pfam_Pterin-binding,pfam_Cbl-bd_cap,pfam_Cobalamin-bd,superfamily_VitB12-dep_Met_synth_activ_dom,superfamily_S_MeTrfase,superfamily_Dihydropteroate_synth-like,superfamily_Cobalamin-bd,superfamily_Cbl-bd_cap,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom,pfscan_S_MeTrfase,pfscan_Pterin-binding,tigrfam_MetH	-	no_errors	MTR	HGNC	ENSG00000116984	tier1	-	-	48	0	0.00	44	6	12.00
MTR	0	genome.wustl.edu	37	1	237058730	237058730	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	237058730	237058730	G	A	SNP	MTR	ENST00000366577	human	ensembl	74_37	+1	known	missense	c.3478	p.V1160I	0.000	pfam_VitB12-dep_Met_synth_activ_dom,superfamily_VitB12-dep_Met_synth_activ_dom,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom,tigrfam_MetH	pfam_S_MeTrfase,pfam_VitB12-dep_Met_synth_activ_dom,pfam_Pterin-binding,pfam_Cbl-bd_cap,pfam_Cobalamin-bd,superfamily_VitB12-dep_Met_synth_activ_dom,superfamily_S_MeTrfase,superfamily_Dihydropteroate_synth-like,superfamily_Cobalamin-bd,superfamily_Cbl-bd_cap,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom,pfscan_S_MeTrfase,pfscan_Pterin-binding,tigrfam_MetH	-	no_errors	MTR	HGNC	ENSG00000116984	tier1	-	-	41	0	0.00	18	4	18.18
MTR	0	genome.wustl.edu	37	1	237060946	237060948	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	237060946	237060948	TTT	-	DEL	MTR	ENST00000470570	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001:0.006	-	-	-	no_errors	MTR	HGNC	ENSG00000116984	tier1			54	0	0.00	35	8	18.60
MTSS1	0	genome.wustl.edu	37	8	125570136	125570136	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	125570136	125570136	G	-	DEL	MTSS1	ENST00000520094	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.048	-	-	-	no_errors	MTSS1	HGNC	ENSG00000170873	tier1			79	0	0.00	46	26	36.11
MTTP	0	genome.wustl.edu	37	4	100543977	100543977	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	100543977	100543977	C	T	SNP	MTTP	ENST00000265517	human	ensembl	74_37	+1	known	missense	c.2657	p.P886L	0.010	NULL	pfam_Lipid_transpt_N,superfamily_Vitellinogen_superhlx,superfamily_Lipid_transp_b-sht_shell,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	MTTP	HGNC	ENSG00000138823	tier1	rs144600401	-	77	0	0.00	33	14	29.79
MUC12	0	genome.wustl.edu	37	7	100638855	100638855	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	100638855	100638855	C	T	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.5011	p.H1671Y	0.000	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	91	0	0.00	66	14	17.50
MUC15	0	genome.wustl.edu	37	11	26587427	26587427	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	26587427	26587427	T	0	DEL	MUC15	ENST00000436318	human	ensembl	74_37	-1	known	frame_shift_del	c.60	p.K20fs	0.000	NULL	NULL	-	no_errors	MUC15	HGNC	ENSG00000169550				52	0	0.00	25	7	21.88
MUC4	0	genome.wustl.edu	37	3	195509046	195509046	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	195509046	195509046	G	A	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	silent	c.9405	p.T3135	0.058	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	-	-	138	0	0.00	126	23	15.44
MUC4	0	genome.wustl.edu	37	3	195510046	195510046	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	195510046	195510046	G	T	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.8405	p.P2802H	0.028	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113				22	0	0.00	8	2	15.38
MUC5B	0	genome.wustl.edu	37	11	1273604	1273604	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	1273604	1273604	C	T	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	silent	c.14904	p.A4968	0.219	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	54	0	0.00	41	12	22.64
MUTYH	0	genome.wustl.edu	37	1	45797165	45797165	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	45797165	45797165	C	T	SNP	MUTYH	ENST00000450313	human	ensembl	74_37	-1	known	missense	c.1250	p.R417H	0.000	superfamily_NUDIX_hydrolase_dom-like	pfam_HhH-GPD_domain,superfamily_DNA_glycosylase,superfamily_NUDIX_hydrolase_dom-like,smart_HhH-GPD_domain,smart_Endouclease3_FeS-loop_motif	-	no_errors	MUTYH	HGNC	ENSG00000132781	tier1	-	-	55	0	0.00	29	14	32.56
MX2	0	genome.wustl.edu	37	21	42749721	42749721	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	42749721	42749721	C	T	SNP	MX2	ENST00000330714	human	ensembl	74_37	+1	known	silent	c.255	p.P85	0.000	NULL	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,superfamily_P-loop_NTPase,superfamily_CH-domain,smart_Dynamin_GTPase,smart_GED,prints_Dynamin_SF	-	no_errors	MX2	HGNC	ENSG00000183486	tier1	-	-	57	0	0.00	28	7	20.00
MYBPH	0	genome.wustl.edu	37	1	203141132	203141132	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	203141132	203141132	T	C	SNP	MYBPH	ENST00000255416	human	ensembl	74_37	-1	known	missense	c.545	p.Q182R	1.000	superfamily_Fibronectin_type3,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPH	HGNC	ENSG00000133055	tier1	-	-	61	0	0.00	60	7	10.45
MYCBP	0	genome.wustl.edu	37	1	39340002	39340003	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	39340002	39340003	AA	-	DEL	MYCBP	ENST00000462027	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MYCBP	HGNC	ENSG00000214114	tier1			8	0	0.00	5	3	37.50
MYCBP2	0	genome.wustl.edu	37	13	77764414	77764414	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	77764414	77764414	G	A	SNP	MYCBP2	ENST00000407578	human	ensembl	74_37	-1	known	missense	c.4127	p.A1376V	1.000	pfam_PHR,superfamily_ARM-type_fold	pfam_PHR,pfam_Reg_chr_condens,pfam_Filamin/ABP280_repeat-like,superfamily_RCC1/BLIP-II,superfamily_Galactose-bd-like,superfamily_Ig_E-set,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_RING,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	MYCBP2	HGNC	ENSG00000005810	tier1	-	-	53	0	0.00	19	5	20.83
MYCBP2	0	genome.wustl.edu	37	13	77842008	77842008	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	77842008	77842008	G	A	SNP	MYCBP2	ENST00000407578	human	ensembl	74_37	-1	known	missense	c.1325	p.T442I	1.000	superfamily_ARM-type_fold	pfam_PHR,pfam_Reg_chr_condens,pfam_Filamin/ABP280_repeat-like,superfamily_RCC1/BLIP-II,superfamily_Galactose-bd-like,superfamily_Ig_E-set,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_RING,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	MYCBP2	HGNC	ENSG00000005810	tier1	-	-	59	0	0.00	53	6	10.17
MYD88	0	genome.wustl.edu	37	3	38182018	38182018	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	38182018	38182018	C	T	SNP	MYD88	ENST00000417037	human	ensembl	74_37	+1	known	silent	c.642	p.G214	1.000	pfam_TIR_dom,superfamily_TIR_dom,smart_TIR_dom,pirsf_Myelin_different_resp_MyD88,pfscan_TIR_dom	pfam_TIR_dom,pfam_Death_domain,superfamily_DEATH-like_dom,superfamily_TIR_dom,smart_Death_domain,smart_TIR_dom,pirsf_Myelin_different_resp_MyD88,pfscan_Death_domain,pfscan_TIR_dom	-	no_errors	MYD88	HGNC	ENSG00000172936	tier1	-	-	62	0	0.00	48	19	28.36
MYH11	0	genome.wustl.edu	37	16	15815323	15815323	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	15815323	15815323	C	T	SNP	MYH11	ENST00000396324	human	ensembl	74_37	-1	known	missense	c.4555	p.E1519K	1.000	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH11	HGNC	ENSG00000133392	tier1	-	-	80	0	0.00	46	17	26.98
MYH14	0	genome.wustl.edu	37	19	50784954	50784954	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	50784954	50784954	G	A	SNP	MYH14	ENST00000262269	human	ensembl	74_37	+1	known	missense	c.4394	p.R1465H	1.000	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH14	HGNC	ENSG00000105357				24	0	0.00	15	3	16.67
MYH2	0	genome.wustl.edu	37	17	10429940	10429940	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	10429940	10429940	C	T	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	missense	c.4163	p.R1388H	1.000	pfam_Myosin_tail,superfamily_Ribosomal_L29	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414	tier1	-	-	92	0	0.00	76	4	5.00
MYH3	0	genome.wustl.edu	37	17	10546239	10546239	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	10546239	10546239	G	A	SNP	MYH3	ENST00000226209	human	ensembl	74_37	-1	known	silent	c.1485	p.F495	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH3	HGNC	ENSG00000109063	tier1	-	-	227	0	0.00	146	59	28.78
MYH3	0	genome.wustl.edu	37	17	10546312	10546312	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	10546312	10546312	T	A	SNP	MYH3	ENST00000226209	human	ensembl	74_37	-1	known	missense	c.1412	p.Y471F	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH3	HGNC	ENSG00000109063	tier1	-	-	143	0	0.00	114	14	10.94
MYH3	0	genome.wustl.edu	37	17	10543993	10543993	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	10543993	10543993	G	T	SNP	MYH3	ENST00000226209	human	ensembl	74_37	-1	known	missense	c.2176	p.L726M	0.901	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH3	HGNC	ENSG00000109063				44	0	0.00	24	3	11.11
MYH4	0	genome.wustl.edu	37	17	10348449	10348449	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	10348449	10348449	A	G	SNP	MYH4	ENST00000255381	human	ensembl	74_37	-1	known	silent	c.5310	p.A1770	0.010	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH4	HGNC	ENSG00000264424	tier1	-	-	116	0	0.00	90	33	26.83
MYH6	0	genome.wustl.edu	37	14	23859522	23859522	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	23859522	23859522	G	A	SNP	MYH6	ENST00000356287	human	ensembl	74_37	-1	known	missense	c.3476	p.T1159M	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH6	HGNC	ENSG00000197616	tier1	-	-	47	0	0.00	47	10	17.54
MYH6	0	genome.wustl.edu	37	14	23862717	23862717	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	23862717	23862717	A	G	SNP	MYH6	ENST00000356287	human	ensembl	74_37	-1	known	missense	c.2939	p.L980P	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH6	HGNC	ENSG00000197616	tier1	-	-	60	0	0.00	48	6	11.11
MYH7	0	genome.wustl.edu	37	14	23891440	23891440	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	23891440	23891440	C	A	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	missense	c.3194	p.S1065I	1.000	superfamily_Prefoldin	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054	tier1	-	-	79	0	0.00	68	14	17.07
MYH7B	0	genome.wustl.edu	37	20	33587382	33587382	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	33587382	33587382	A	G	SNP	MYH7B	ENST00000262873	human	ensembl	74_37	+1	novel	missense	c.4675	p.S1559G	0.998	pfam_Myosin_tail,superfamily_t-SNARE	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Myosin_S1_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7B	HGNC	ENSG00000078814	tier1	-	-	55	0	0.00	52	4	7.14
MYH8	0	genome.wustl.edu	37	17	10309410	10309410	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	10309410	10309410	C	T	SNP	MYH8	ENST00000403437	human	ensembl	74_37	-1	known	missense	c.2380	p.V794I	0.114	superfamily_P-loop_NTPase,pfscan_IQ_motif_EF-hand-BS	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH8	HGNC	ENSG00000133020	tier1	-	-	53	0	0.00	42	10	19.23
MYH8	0	genome.wustl.edu	37	17	10318470	10318470	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	10318470	10318470	A	G	SNP	MYH8	ENST00000403437	human	ensembl	74_37	-1	known	silent	c.768	p.G256	0.725	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH8	HGNC	ENSG00000133020				60	0	0.00	51	4	7.27
MYL9	0	genome.wustl.edu	37	20	35176560	35176560	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	35176560	35176560	C	T	SNP	MYL9	ENST00000279022	human	ensembl	74_37	+1	known	missense	c.310	p.R104C	1.000	smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MYL9	HGNC	ENSG00000101335	tier1	-	-	67	0	0.00	48	5	9.43
MYLK	0	genome.wustl.edu	37	3	123419012	123419012	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	123419012	123419012	C	T	SNP	MYLK	ENST00000360304	human	ensembl	74_37	-1	known	silent	c.3303	p.K1101	0.929	pfam_Ig_I-set,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	MYLK	HGNC	ENSG00000065534	tier1	-	-	35	0	0.00	29	7	19.44
MYLK	0	genome.wustl.edu	37	3	123453042	123453042	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	123453042	123453042	G	A	SNP	MYLK	ENST00000360304	human	ensembl	74_37	-1	known	silent	c.801	p.T267	0.001	NULL	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	MYLK	HGNC	ENSG00000065534	tier1	-	-	22	0	0.00	15	4	21.05
MYLK	0	genome.wustl.edu	37	3	123451928	123451928	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	123451928	123451928	T	C	SNP	MYLK	ENST00000360304	human	ensembl	74_37	-1	known	missense	c.1331	p.E444G	0.010	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	MYLK	HGNC	ENSG00000065534				21	0	0.00	25	3	10.71
MYO15A	0	genome.wustl.edu	37	17	18058717	18058717	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	18058717	18058717	C	T	SNP	MYO15A	ENST00000585180	human	ensembl	74_37	+1	putative	missense	c.217	p.R73W	0.000	NULL	NULL	-	no_errors	MYO15A	HGNC	ENSG00000091536	tier1	-	-	72	0	0.00	44	18	29.03
MYO15B	0	genome.wustl.edu	37	17	73621202	73621202	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	73621202	73621202	G	T	SNP	MYO15B	ENST00000577948	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	1.000	-	-	-	no_errors	MYO15B	HGNC	ENSG00000266714	tier1	-	-	34	0	0.00	30	5	14.29
MYO16	0	genome.wustl.edu	37	13	109496836	109496836	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	109496836	109496836	G	A	SNP	MYO16	ENST00000356711	human	ensembl	74_37	+1	known	missense	c.1177	p.E393K	0.998	superfamily_P-loop_NTPase	pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO16	HGNC	ENSG00000041515	tier1	-	-	50	0	0.00	30	5	14.29
MYO16	0	genome.wustl.edu	37	13	109792756	109792756	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	109792756	109792756	C	T	SNP	MYO16	ENST00000356711	human	ensembl	74_37	+1	known	missense	c.4130	p.A1377V	0.000	NULL	pfam_Myosin_head_motor_dom,pfam_Ankyrin_rpt,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Myosin_head_motor_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO16	HGNC	ENSG00000041515	tier1	-	-	50	0	0.00	43	10	18.87
MYO1A	0	genome.wustl.edu	37	12	57422573	57422573	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	57422573	57422573	T	-	DEL	MYO1A	ENST00000300119	human	ensembl	74_37	-1	known	frame_shift_del	c.3098	p.K1033fs	1.000	pfam_Myosin_tail_2	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYO1A	HGNC	ENSG00000166866	tier1			66	0	0.00	48	8	14.29
MYO3A	0	genome.wustl.edu	37	10	26455081	26455081	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	26455081	26455081	G	A	SNP	MYO3A	ENST00000265944	human	ensembl	74_37	+1	known	missense	c.3085	p.D1029N	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,pfscan_Prot_kinase_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO3A	HGNC	ENSG00000095777	tier1	rs56403976	-	66	0	0.00	56	28	33.33
MYO5B	0	genome.wustl.edu	37	18	47500881	47500881	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	47500881	47500881	G	T	SNP	MYO5B	ENST00000285039	human	ensembl	74_37	-1	known	silent	c.1161	p.T387	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5B	HGNC	ENSG00000167306				34	0	0.00	36	3	7.69
MYO5C	0	genome.wustl.edu	37	15	52504030	52504030	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	52504030	52504030	T	C	SNP	MYO5C	ENST00000261839	human	ensembl	74_37	-1	known	missense	c.4193	p.H1398R	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5C	HGNC	ENSG00000128833				60	0	0.00	46	3	6.12
MYO7A	0	genome.wustl.edu	37	11	76867057	76867058	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	76867057	76867058	-	C	INS	MYO7A	ENST00000409709	human	ensembl	74_37	+1	known	frame_shift_ins	c.390_391	p.H132fs	1.000:1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_FERM_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7A	HGNC	ENSG00000137474	tier1			57	0	0.00	36	10	21.74
MYO7A	0	genome.wustl.edu	37	11	76890120	76890120	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	76890120	76890120	C	T	SNP	MYO7A	ENST00000409709	human	ensembl	74_37	+1	known	missense	c.2312	p.A771V	0.789	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_FERM_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7A	HGNC	ENSG00000137474	tier1	-	-	30	0	0.00	18	4	18.18
MYO9B	0	genome.wustl.edu	37	19	17312772	17312772	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	17312772	17312772	G	A	SNP	MYO9B	ENST00000594824	human	ensembl	74_37	+1	known	missense	c.4601	p.S1534N	0.983	NULL	pfam_Myosin_head_motor_dom,pfam_RhoGAP_dom,pfam_Ras-assoc,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Rho_GTPase_activation_prot,smart_Ras-assoc,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_IQ_motif_EF-hand-BS,pfscan_Ras-assoc,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO9B	HGNC	ENSG00000099331				24	0	0.00	20	3	13.04
MYOM3	0	genome.wustl.edu	37	1	24433677	24433677	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	24433677	24433677	C	A	SNP	MYOM3	ENST00000330966	human	ensembl	74_37	-1	known	missense	c.291	p.E97D	1.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM3	HGNC	ENSG00000142661	tier1	-	-	54	0	0.00	37	11	22.92
MYOT	0	genome.wustl.edu	37	5	137216556	137216557	+	Splice_Site	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	137216556	137216557	-	A	INS	MYOT	ENST00000239926	human	ensembl	74_37	+1	known	splice_site_ins	c.683+2_683+1	e4+2	1.000:1.000	-	-	-	no_errors	MYOT	HGNC	ENSG00000120729	tier1			33	0	0.00	29	4	12.12
MYOZ2	0	genome.wustl.edu	37	4	120107300	120107300	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	120107300	120107300	T	C	SNP	MYOZ2	ENST00000307128	human	ensembl	74_37	+1	known	missense	c.740	p.V247A	0.934	pfam_Calsarcin-bd	pfam_Calsarcin-bd	-	no_errors	MYOZ2	HGNC	ENSG00000172399	tier1	-	-	33	0	0.00	32	7	17.95
MYPOP	0	genome.wustl.edu	37	19	46404933	46404933	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	46404933	46404933	G	A	SNP	MYPOP	ENST00000322217	human	ensembl	74_37	-1	known	silent	c.99	p.R33	1.000	superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYPOP	HGNC	ENSG00000176182	tier1	-	-	107	0	0.00	51	30	37.04
MYRF	0	genome.wustl.edu	37	11	61543873	61543873	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	61543873	61543873	C	T	SNP	MYRF	ENST00000278836	human	ensembl	74_37	+1	known	missense	c.1468	p.R490C	1.000	pfam_NDT80_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd	pfam_NDT80_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd	-	no_errors	MYRF	HGNC	ENSG00000124920	tier1	-	-	54	0	0.00	37	5	11.90
MYT1	0	genome.wustl.edu	37	20	62871697	62871697	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	62871697	62871697	G	A	SNP	MYT1	ENST00000536311	human	ensembl	74_37	+1	known	missense	c.3343	p.D1115N	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1	HGNC	ENSG00000196132				39	0	0.00	29	4	12.12
MYT1L	0	genome.wustl.edu	37	2	1893213	1893213	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	1893213	1893213	C	A	SNP	MYT1L	ENST00000399161	human	ensembl	74_37	-1	known	missense	c.2320	p.D774Y	1.000	pfam_Myelin_TF	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	MYT1L	HGNC	ENSG00000186487	tier1	-	-	58	0	0.00	21	13	38.24
MZT2B	0	genome.wustl.edu	37	2	130941391	130941391	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	130941391	130941391	C	0	DEL	MZT2B	ENST00000409255	human	ensembl	74_37	+1	novel	frame_shift_del	c.351	p.P119fs	0.986	NULL	NULL	-	no_errors	MZT2B	HGNC	ENSG00000152082				83	0	0.00	54	6	10.00
NAA15	0	genome.wustl.edu	37	4	140291445	140291445	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	140291445	140291445	A	-	DEL	NAA15	ENST00000296543	human	ensembl	74_37	+1	known	frame_shift_del	c.1834	p.N614fs	1.000	pirsf_NatA_aux_su	pfam_NatA_aux_su,smart_TPR_repeat,pirsf_NatA_aux_su,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NAA15	HGNC	ENSG00000164134	tier1			48	0	0.00	49	14	22.22
NAB2	0	genome.wustl.edu	37	12	57485734	57485734	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	57485734	57485734	C	T	SNP	NAB2	ENST00000300131	human	ensembl	74_37	+1	known	missense	c.910	p.R304C	1.000	pfam_NAB_co-repressor_dom	pfam_NAB_co-repressor_dom,pfam_Nab_N,superfamily_SAM/pointed	-	no_errors	NAB2	HGNC	ENSG00000166886	tier1	-	-	48	0	0.00	29	9	23.68
NACA	0	genome.wustl.edu	37	12	57110462	57110462	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	57110462	57110462	C	T	SNP	NACA	ENST00000454682	human	ensembl	74_37	-1	known	missense	c.4852	p.A1618T	0.001	NULL	pfam_Nas_poly-pep-assoc_cplx_dom,superfamily_UBA-like,pfscan_Nas_poly-pep-assoc_cplx_dom	-	no_errors	NACA	HGNC	ENSG00000196531	tier1	-	-	62	0	0.00	69	18	20.69
NACC1	0	genome.wustl.edu	37	19	13246434	13246434	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	13246434	13246434	C	T	SNP	NACC1	ENST00000292431	human	ensembl	74_37	+1	known	missense	c.413	p.A138V	1.000	NULL	pfam_BTB_POZ,pfam_BEN_domain,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	NACC1	HGNC	ENSG00000160877	tier1	-	-	63	0	0.00	35	7	16.67
NADK	0	genome.wustl.edu	37	1	1687725	1687725	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	1687725	1687725	G	A	SNP	NADK	ENST00000344463	human	ensembl	74_37	-1	known	missense	c.992	p.T331M	1.000	pfam_PolyP/ATP_NADK_prd,superfamily_ATP-NAD_kinase_PpnK-typ	pfam_PolyP/ATP_NADK_prd,superfamily_ATP-NAD_kinase_PpnK-typ	-	no_errors	NADK	HGNC	ENSG00000008130	tier1	-	-	45	0	0.00	39	6	13.33
NALCN	0	genome.wustl.edu	37	13	101833385	101833385	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	101833385	101833385	C	T	SNP	NALCN	ENST00000470333	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.029	-	-	-	no_errors	NALCN	HGNC	ENSG00000102452	tier1	-	-	21	0	0.00	7	4	36.36
NAP1L3	0	genome.wustl.edu	37	X	92927880	92927880	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	92927880	92927880	G	T	SNP	NAP1L3	ENST00000373079	human	ensembl	74_37	-1	known	missense	c.424	p.P142T	1.000	pfam_NAP_family	pfam_NAP_family	-	no_errors	NAP1L3	HGNC	ENSG00000186310	tier1	-	-	61	0	0.00	29	4	12.12
NAPEPLD	0	genome.wustl.edu	37	7	102760123	102760123	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	102760123	102760123	A	-	DEL	NAPEPLD	ENST00000455523	human	ensembl	74_37	-1	known	frame_shift_del	c.1061	p.F354fs	1.000	NULL	NULL	-	no_errors	NAPEPLD	HGNC	ENSG00000161048	tier1			54	0	0.00	60	8	11.76
NARFL	0	genome.wustl.edu	37	16	780264	780264	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	780264	780264	G	A	SNP	NARFL	ENST00000562862	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NARFL	HGNC	ENSG00000103245	tier1	-	-	42	0	0.00	27	12	30.77
NAT9	0	genome.wustl.edu	37	17	72768238	72768238	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	72768238	72768238	C	A	SNP	NAT9	ENST00000580632	human	ensembl	74_37	-1	novel	missense	c.350	p.G117V	0.000	superfamily_Acyl_CoA_acyltransferase	superfamily_Acyl_CoA_acyltransferase	-	no_errors	NAT9	HGNC	ENSG00000109065	tier1	-	-	55	0	0.00	31	15	32.61
NAV2-AS1	0	genome.wustl.edu	37	11	20141368	20141369	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	20141368	20141369	AA	-	DEL	NAV2-AS1	ENST00000526642	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	NAV2-AS1	HGNC	ENSG00000254894	tier1			36	0	0.00	25	4	13.79
NAV3	0	genome.wustl.edu	37	12	78513542	78513542	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	78513542	78513542	C	T	SNP	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	missense	c.3566	p.S1189L	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798	tier1	-	-	55	0	0.00	39	14	26.42
NBAS	0	genome.wustl.edu	37	2	15614272	15614272	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	15614272	15614272	C	T	SNP	NBAS	ENST00000281513	human	ensembl	74_37	-1	known	silent	c.1518	p.R506	0.997	NULL	pfam_Sec39,superfamily_Quino_amine_DH_bsu	-	no_errors	NBAS	HGNC	ENSG00000151779	tier1	-	-	82	0	0.00	70	11	13.58
NBAS	0	genome.wustl.edu	37	2	15694247	15694248	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	15694247	15694248	-	A	INS	NBAS	ENST00000281513	human	ensembl	74_37	-1	known	frame_shift_ins	c.225_224	p.L75fs	1.000:1.000	NULL	pfam_Sec39,superfamily_Quino_amine_DH_bsu	-	no_errors	NBAS	HGNC	ENSG00000151779	tier1			136	0	0.00	111	46	29.30
NBEA	0	genome.wustl.edu	37	13	35644864	35644864	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	35644864	35644864	A	C	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.1446	p.K482N	1.000	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915	tier1	-	-	170	0	0.00	120	47	27.98
NBEA	0	genome.wustl.edu	37	13	36158057	36158057	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	36158057	36158057	A	G	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.7058	p.K2353R	1.000	pfam_BEACH_dom,superfamily_BEACH_dom,pfscan_BEACH_dom	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915	tier1	-	-	36	0	0.00	39	15	27.78
NBEAL1	0	genome.wustl.edu	37	2	204058623	204058623	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	204058623	204058623	T	-	DEL	NBEAL1	ENST00000449802	human	ensembl	74_37	+1	known	frame_shift_del	c.6940	p.F2315fs	1.000	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL1	HGNC	ENSG00000144426	tier1			39	0	0.00	41	11	21.15
NBEAL2	0	genome.wustl.edu	37	3	47040003	47040003	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	47040003	47040003	C	T	SNP	NBEAL2	ENST00000450053	human	ensembl	74_37	+1	known	missense	c.3169	p.R1057W	1.000	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL2	HGNC	ENSG00000160796	tier1	-	-	36	0	0.00	28	8	22.22
NBEAL2	0	genome.wustl.edu	37	3	47033032	47033032	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	47033032	47033032	T	C	SNP	NBEAL2	ENST00000450053	human	ensembl	74_37	+1	known	missense	c.779	p.V260A	1.000	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL2	HGNC	ENSG00000160796				20	0	0.00	26	2	7.14
NBPF10	0	genome.wustl.edu	37	1	145299885	145299886	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	145299885	145299886	AA	-	DEL	NBPF10	ENST00000342960	human	ensembl	74_37	+1	known	frame_shift_del	c.934_935	p.K312fs	0.122:0.118	NULL	pfam_NBPF_dom	-	no_errors	NBPF10	HGNC	ENSG00000163386	tier1			485	0	0.00	385	42	9.84
NBR1	0	genome.wustl.edu	37	17	41362035	41362035	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	41362035	41362035	A	G	SNP	NBR1	ENST00000341165	human	ensembl	74_37	+1	known	missense	c.2843	p.Q948R	1.000	superfamily_UBA-like,pfscan_UBA/transl_elong_EF1B_N_euk	pfam_OPR_PB1,pfam_Znf_ZZ,superfamily_UBA-like,smart_OPR_PB1,smart_Znf_ZZ,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_ZZ	-	no_errors	NBR1	HGNC	ENSG00000188554	tier1	-	-	79	0	0.00	68	4	5.56
NCAM1	0	genome.wustl.edu	37	11	113143814	113143814	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	113143814	113143814	G	A	SNP	NCAM1	ENST00000528158	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.733	-	-	-	no_errors	NCAM1	HGNC	ENSG00000149294	tier1	-	-	96	0	0.00	62	14	18.42
NCAM1	0	genome.wustl.edu	37	11	113146392	113146392	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	113146392	113146392	G	A	SNP	NCAM1	ENST00000397957	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.972	-	-	-	no_errors	NCAM1	HGNC	ENSG00000149294	tier1	-	-	20	0	0.00	18	5	21.74
NCAM1	0	genome.wustl.edu	37	11	113147558	113147558	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	113147558	113147558	G	-	DEL	NCAM1	ENST00000397957	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	NCAM1	HGNC	ENSG00000149294	tier1			63	0	0.00	36	11	23.40
NCAPD2	0	genome.wustl.edu	37	12	6623452	6623452	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	6623452	6623452	C	T	SNP	NCAPD2	ENST00000315579	human	ensembl	74_37	+1	known	silent	c.609	p.Y203	1.000	pirsf_Condensin_cplx_su1	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_Condensin_cplx_su1	-	no_errors	NCAPD2	HGNC	ENSG00000010292	tier1	-	-	69	0	0.00	52	7	11.86
NCDN	0	genome.wustl.edu	37	1	36026864	36026864	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	36026864	36026864	C	T	SNP	NCDN	ENST00000356090	human	ensembl	74_37	+1	known	missense	c.1112	p.A371V	1.000	NULL	NULL	-	no_errors	NCDN	HGNC	ENSG00000020129	tier1	-	-	39	0	0.00	23	7	23.33
NCKAP1L	0	genome.wustl.edu	37	12	54910702	54910702	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	54910702	54910702	C	T	SNP	NCKAP1L	ENST00000293373	human	ensembl	74_37	+1	known	missense	c.1021	p.R341W	0.998	pfam_Nck-associated_protein-1	pfam_Nck-associated_protein-1,superfamily_Nucl_hormone_rcpt_ligand-bd	-	no_errors	NCKAP1L	HGNC	ENSG00000123338	tier1	-	-	92	0	0.00	62	35	36.08
NCOR2	0	genome.wustl.edu	37	12	124821385	124821385	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	124821385	124821385	G	A	SNP	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	missense	c.6050	p.A2017V	0.365	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498	tier1	-	-	35	0	0.00	29	9	23.68
NCOR2	0	genome.wustl.edu	37	12	124829303	124829303	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	124829303	124829303	C	T	SNP	NCOR2	ENST00000356219	human	ensembl	74_37	-1	known	silent	c.4575	p.S1525	0.006	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR2	HGNC	ENSG00000196498	tier1	-	-	32	0	0.00	20	12	37.50
NDFIP1	0	genome.wustl.edu	37	5	141511526	141511526	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	141511526	141511526	A	-	DEL	NDFIP1	ENST00000509436	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NDFIP1	HGNC	ENSG00000131507	tier1			18	0	0.00	11	3	21.43
NDNF	0	genome.wustl.edu	37	4	121958469	121958469	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	121958469	121958469	G	A	SNP	NDNF	ENST00000379692	human	ensembl	74_37	-1	known	silent	c.657	p.H219	1.000	pfam_DUF2369,superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_DUF2369,superfamily_Fibronectin_type3,smart_Fibronectin_type3	-	no_errors	NDNF	HGNC	ENSG00000173376	tier1	-	-	62	0	0.00	46	5	9.80
NDOR1	0	genome.wustl.edu	37	9	140110190	140110190	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	140110190	140110190	G	-	DEL	NDOR1	ENST00000371521	human	ensembl	74_37	+1	known	frame_shift_del	c.1368	p.P458fs	1.000	pfam_OxRdtase_FAD/NAD-bd,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase	pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_Riboflavin_synthase-like_b-brl,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NDOR1	HGNC	ENSG00000188566	tier1			88	0	0.00	64	16	20.00
NDUFA10	0	genome.wustl.edu	37	2	240923039	240923039	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	240923039	240923039	G	A	SNP	NDUFA10	ENST00000307300	human	ensembl	74_37	-1	novel	silent	c.1185	p.T395	0.001	NULL	superfamily_P-loop_NTPase,pirsf_NADH_UbQ_OxRdtase_42KD_su	-	no_errors	NDUFA10	HGNC	ENSG00000130414	tier1	-	-	47	0	0.00	22	8	26.67
NDUFA7	0	genome.wustl.edu	37	19	8386227	8386227	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	8386227	8386227	G	A	SNP	NDUFA7	ENST00000301457	human	ensembl	74_37	-1	known	missense	c.16	p.R6C	0.008	pfam_NADH-UbQ_OxRdtase_B14.5a_su	pfam_NADH-UbQ_OxRdtase_B14.5a_su	-	no_errors	NDUFA7	HGNC	ENSG00000267855	tier1	-	-	37	0	0.00	31	13	29.55
NEB	0	genome.wustl.edu	37	2	152544898	152544898	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	152544898	152544898	C	A	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.2323	p.A775S	1.000	smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091	tier1	-	-	57	0	0.00	59	4	6.25
NECAB1	0	genome.wustl.edu	37	8	91962099	91962100	+	Frame_Shift_Ins	INS	-	-	GT			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	91962099	91962100	-	GT	INS	NECAB1	ENST00000417640	human	ensembl	74_37	+1	known	frame_shift_ins	c.925_926	p.W311fs	1.000:0.999	pfam_Antibiotic_mOase,superfamily_Dimeric_a/b-barrel	pfam_Antibiotic_mOase,superfamily_Dimeric_a/b-barrel,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NECAB1	HGNC	ENSG00000123119	tier1			58	0	0.00	50	22	30.56
NEDD4	0	genome.wustl.edu	37	15	56122187	56122187	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	56122187	56122187	G	T	SNP	NEDD4	ENST00000508342	human	ensembl	74_37	-1	known	missense	c.3868	p.L1290M	0.743	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_WW_dom	-	no_errors	NEDD4	HGNC	ENSG00000069869	tier1	-	-	89	0	0.00	75	9	10.71
NEDD9	0	genome.wustl.edu	37	6	11191156	11191156	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	11191156	11191156	C	T	SNP	NEDD9	ENST00000379446	human	ensembl	74_37	-1	known	missense	c.946	p.A316T	0.897	NULL	pfam_CAS_DUF3513,pfam_Serine_rich,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	NEDD9	HGNC	ENSG00000111859	tier1	-	-	38	0	0.00	35	4	10.26
NEIL1	0	genome.wustl.edu	37	15	75641538	75641538	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	75641538	75641538	C	T	SNP	NEIL1	ENST00000355059	human	ensembl	74_37	+1	known	missense	c.292	p.H98Y	1.000	pfam_DNA_glycosylase/AP_lyase_cat,superfamily_DNA_glycosylase/AP_lyase_cat,smart_DNA_glycosylase/AP_lyase_cat,pfscan_DNA_glycosylase/AP_lyase_cat	pfam_Endonuclease-VIII_DNA-bd,pfam_DNA_glycosylase/AP_lyase_cat,pfam_DNA_glyclase/AP_lyase_DNA-bd,superfamily_DNA_glycosylase/AP_lyase_cat,superfamily_Ribosomal_S13-like_H2TH,smart_DNA_glycosylase/AP_lyase_cat,pfscan_DNA_glycosylase/AP_lyase_cat	-	no_errors	NEIL1	HGNC	ENSG00000140398	tier1	-	-	91	0	0.00	44	25	35.71
NEIL3	0	genome.wustl.edu	37	4	178283532	178283532	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	178283532	178283532	T	-	DEL	NEIL3	ENST00000264596	human	ensembl	74_37	+1	known	frame_shift_del	c.1725	p.F577fs	0.884	pfam_Znf_GRF	pfam_Znf_GRF,pfam_DNA_glyclase/AP_lyase_DNA-bd,pfam_Znf_RanBP2,superfamily_Ribosomal_S13-like_H2TH,superfamily_DNA_glycosylase/AP_lyase_cat,smart_Znf_RanBP2,pfscan_Znf_RanBP2,pfscan_Znf_DNA_glyclase/AP_lyase,pfscan_DNA_glycosylase/AP_lyase_cat	-	no_errors	NEIL3	HGNC	ENSG00000109674	tier1			66	0	0.00	44	11	20.00
NELFB	0	genome.wustl.edu	37	9	140166584	140166584	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	140166584	140166584	C	T	SNP	NELFB	ENST00000343053	human	ensembl	74_37	+1	known	missense	c.1397	p.T466M	0.962	pfam_COBRA1	pfam_COBRA1	-	no_errors	NELFB	HGNC	ENSG00000188986	tier1	-	-	58	0	0.00	46	8	14.81
NES	0	genome.wustl.edu	37	1	156640743	156640743	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	156640743	156640743	G	T	SNP	NES	ENST00000368223	human	ensembl	74_37	-1	known	silent	c.3237	p.S1079	0.001	NULL	pfam_IF	-	no_errors	NES	HGNC	ENSG00000132688	tier1	-	-	57	0	0.00	45	8	15.09
NES	0	genome.wustl.edu	37	1	156641686	156641686	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	156641686	156641686	C	T	SNP	NES	ENST00000368223	human	ensembl	74_37	-1	known	missense	c.2294	p.R765Q	0.002	NULL	pfam_IF	-	no_errors	NES	HGNC	ENSG00000132688	tier1	-	-	78	0	0.00	60	7	10.29
NEUROD1	0	genome.wustl.edu	37	2	182542972	182542972	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	182542972	182542972	G	-	DEL	NEUROD1	ENST00000295108	human	ensembl	74_37	-1	known	frame_shift_del	c.616	p.H206fs	0.996	pfam_Neurogenic_DUF,pirsf_TF_bHLH_NeuroD	pfam_Neurogenic_DUF,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pirsf_TF_bHLH_NeuroD,pfscan_bHLH_dom	-	no_errors	NEUROD1	HGNC	ENSG00000162992	tier1			52	0	0.00	38	6	13.64
NEUROG1	0	genome.wustl.edu	37	5	134870770	134870770	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	134870770	134870770	G	A	SNP	NEUROG1	ENST00000314744	human	ensembl	74_37	-1	known	missense	c.611	p.A204V	0.164	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	NEUROG1	HGNC	ENSG00000181965	tier1	-	-	141	0	0.00	89	11	11.00
NEUROG1	0	genome.wustl.edu	37	5	134871227	134871227	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	134871227	134871227	C	T	SNP	NEUROG1	ENST00000314744	human	ensembl	74_37	-1	known	missense	c.154	p.A52T	0.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	NEUROG1	HGNC	ENSG00000181965				18	0	0.00	16	3	15.79
NEUROG3	0	genome.wustl.edu	37	10	71332488	71332488	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	71332488	71332488	G	A	SNP	NEUROG3	ENST00000242462	human	ensembl	74_37	-1	known	silent	c.312	p.D104	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	NEUROG3	HGNC	ENSG00000122859	tier1	-	-	45	0	0.00	40	6	13.04
NEXN-AS1	0	genome.wustl.edu	37	1	78354426	78354426	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	78354426	78354426	G	A	SNP	NEXN-AS1	ENST00000421331	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NEXN-AS1	HGNC	ENSG00000235927	tier1	-	-	156	0	0.00	134	28	17.28
NFASC	0	genome.wustl.edu	37	1	204923438	204923439	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	204923438	204923439	-	G	INS	NFASC	ENST00000367172	human	ensembl	74_37	+1	known	frame_shift_ins	c.338_339	p.E115fs	1.000:1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NFASC	HGNC	ENSG00000163531	tier1			72	0	0.00	63	8	11.27
NFASC	0	genome.wustl.edu	37	1	204939850	204939850	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	204939850	204939850	G	A	SNP	NFASC	ENST00000367172	human	ensembl	74_37	+1	known	nonsense	c.1110	p.W370*	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NFASC	HGNC	ENSG00000163531	tier1	-	-	62	0	0.00	54	4	6.90
NFATC2	0	genome.wustl.edu	37	20	50139933	50139933	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	50139933	50139933	C	T	SNP	NFATC2	ENST00000396009	human	ensembl	74_37	-1	known	missense	c.847	p.V283M	0.066	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC2	HGNC	ENSG00000101096	tier1	-	-	36	0	0.00	44	8	15.38
NFIB	0	genome.wustl.edu	37	9	14113047	14113047	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	14113047	14113047	C	T	SNP	NFIB	ENST00000397581	human	ensembl	74_37	-1	known	missense	c.1445	p.R482Q	1.000	pfam_CTF/NFI	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIB	HGNC	ENSG00000147862	tier1	-	-	37	0	0.00	50	5	9.09
NFIX	0	genome.wustl.edu	37	19	13186359	13186359	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	13186359	13186359	C	T	SNP	NFIX	ENST00000585575	human	ensembl	74_37	+1	known	missense	c.805	p.R269C	1.000	pfam_CTF/NFI	pfam_CTF/NFI,pfam_CTF/NFI_DNA-bd_N,pfam_MAD_homology1_Dwarfin-type,smart_MAD_homology1_Dwarfin-type,pfscan_CTF/NFI_DNA-bd-dom	-	no_errors	NFIX	HGNC	ENSG00000008441				72	0	0.00	55	4	6.78
NFKBIL1	0	genome.wustl.edu	37	6	31515510	31515510	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	31515510	31515510	C	A	SNP	NFKBIL1	ENST00000376148	human	ensembl	74_37	+1	known	silent	c.39	p.A13	1.000	NULL	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	NFKBIL1	HGNC	ENSG00000204498	tier1	-	-	152	0	0.00	134	18	11.84
NHLH2	0	genome.wustl.edu	37	1	116380789	116380789	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	116380789	116380789	G	A	SNP	NHLH2	ENST00000320238	human	ensembl	74_37	-1	known	missense	c.205	p.R69C	1.000	pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	NHLH2	HGNC	ENSG00000177551	tier1	-	-	50	0	0.00	25	11	30.56
NIPBL	0	genome.wustl.edu	37	5	36961634	36961634	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	36961634	36961634	G	T	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	missense	c.407	p.S136I	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190	tier1	-	-	73	0	0.00	55	4	6.78
NIPBL	0	genome.wustl.edu	37	5	36985453	36985453	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	36985453	36985453	C	-	DEL	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	frame_shift_del	c.2171	p.P725fs	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	NIPBL	HGNC	ENSG00000164190	tier1			23	0	0.00	16	5	23.81
NISCH	0	genome.wustl.edu	37	3	52514214	52514214	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	52514214	52514214	C	T	SNP	NISCH	ENST00000345716	human	ensembl	74_37	+1	known	silent	c.1431	p.S477	0.519	NULL	pfam_Phox,pfam_Leu-rich_rpt,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	NISCH	HGNC	ENSG00000010322	tier1	-	-	61	0	0.00	39	11	22.00
NKD1	0	genome.wustl.edu	37	16	50667134	50667135	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	50667134	50667135	0	C	INS	NKD1	ENST00000268459	human	ensembl	74_37	+1	known	frame_shift_ins	c.855_856	p.R287fs	1.000:1.000	NULL	pfscan_EF_hand_dom	-	no_errors	NKD1	HGNC	ENSG00000140807				77	0	0.00	64	7	9.86
NKX2-1	0	genome.wustl.edu	37	14	36986897	36986897	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	36986897	36986897	G	A	SNP	NKX2-1	ENST00000354822	human	ensembl	74_37	-1	known	silent	c.792	p.G264	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-1	HGNC	ENSG00000136352				59	0	0.00	37	8	17.78
NKX2-6	0	genome.wustl.edu	37	8	23563932	23563932	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	23563932	23563932	G	A	SNP	NKX2-6	ENST00000325017	human	ensembl	74_37	-1	known	silent	c.180	p.G60	0.002	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	NKX2-6	HGNC	ENSG00000180053	tier1	-	-	155	0	0.00	127	37	22.56
NLE1	0	genome.wustl.edu	37	17	33462280	33462280	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	33462280	33462280	C	A	SNP	NLE1	ENST00000442241	human	ensembl	74_37	-1	known	missense	c.1202	p.G401V	0.999	superfamily_WD40_repeat_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_NLE,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep,prints_Gprotein_B	-	no_errors	NLE1	HGNC	ENSG00000073536	tier1	-	-	56	0	0.00	57	7	10.94
NLGN3	0	genome.wustl.edu	37	X	70367609	70367609	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	70367609	70367609	C	T	SNP	NLGN3	ENST00000358741	human	ensembl	74_37	+1	known	missense	c.10	p.R4W	0.816	NULL	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN3	HGNC	ENSG00000196338	tier1	-	-	56	0	0.00	25	18	41.86
NLRP2	0	genome.wustl.edu	37	19	55494830	55494830	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	55494830	55494830	C	T	SNP	NLRP2	ENST00000448584	human	ensembl	74_37	+1	known	silent	c.1764	p.C588	0.001	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP2	HGNC	ENSG00000022556	tier1	-	-	54	0	0.00	35	17	32.69
NLRP5	0	genome.wustl.edu	37	19	56538313	56538313	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	56538313	56538313	C	T	SNP	NLRP5	ENST00000390649	human	ensembl	74_37	+1	known	silent	c.714	p.H238	0.008	superfamily_P-loop_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP5	HGNC	ENSG00000171487	tier1	-	-	42	0	0.00	31	12	27.91
NLRP6	0	genome.wustl.edu	37	11	285298	285298	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	285298	285298	C	A	SNP	NLRP6	ENST00000312165	human	ensembl	74_37	+1	known	silent	c.2673	p.T891	0.037	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP6	HGNC	ENSG00000174885	tier1	-	-	43	0	0.00	40	4	9.09
NLRP7	0	genome.wustl.edu	37	19	55447775	55447775	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	55447775	55447775	G	A	SNP	NLRP7	ENST00000446217	human	ensembl	74_37	-1	known	silent	c.2238	p.T746	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP7	HGNC	ENSG00000167634	tier1	-	-	12	0	0.00	13	6	31.58
NLRP9	0	genome.wustl.edu	37	19	56244406	56244406	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	56244406	56244406	T	A	SNP	NLRP9	ENST00000332836	human	ensembl	74_37	-1	known	missense	c.791	p.K264M	0.000	pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP9	HGNC	ENSG00000185792				38	0	0.00	32	2	5.88
NMB	0	genome.wustl.edu	37	15	85198627	85198627	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	85198627	85198627	A	G	SNP	NMB	ENST00000360476	human	ensembl	74_37	-1	known	missense	c.344	p.L115P	0.981	NULL	pfam_Bombesin	-	no_errors	NMB	HGNC	ENSG00000197696	tier1	-	-	70	0	0.00	34	11	24.44
NMNAT2	0	genome.wustl.edu	37	1	183261950	183261950	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	183261950	183261950	C	G	SNP	NMNAT2	ENST00000287713	human	ensembl	74_37	-1	known	missense	c.217	p.A73P	1.000	pfam_Cyt_trans-like	pfam_Cyt_trans-like	-	no_errors	NMNAT2	HGNC	ENSG00000157064	tier1	-	-	50	0	0.00	43	14	24.56
NOG	0	genome.wustl.edu	37	17	54671870	54671870	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	54671870	54671870	G	-	DEL	NOG	ENST00000332822	human	ensembl	74_37	+1	known	frame_shift_del	c.286	p.G97fs	0.630	pfam_Noggin,pirsf_Noggin	pfam_Noggin,pirsf_Noggin	-	no_errors	NOG	HGNC	ENSG00000183691	tier1			19	0	0.00	12	9	42.86
NOL6	0	genome.wustl.edu	37	9	33465269	33465269	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	33465269	33465269	C	A	SNP	NOL6	ENST00000297990	human	ensembl	74_37	-1	known	missense	c.2617	p.D873Y	0.994	pfam_Nrap	pfam_Nrap	-	no_errors	NOL6	HGNC	ENSG00000165271	tier1	-	-	62	0	0.00	63	4	5.97
NOL8	0	genome.wustl.edu	37	9	95077338	95077338	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	95077338	95077338	G	A	SNP	NOL8	ENST00000442668	human	ensembl	74_37	-1	known	silent	c.1569	p.S523	0.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	NOL8	HGNC	ENSG00000198000	tier1	-	-	72	0	0.00	44	18	29.03
NOP56	0	genome.wustl.edu	37	20	2637737	2637737	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	2637737	2637737	C	T	SNP	NOP56	ENST00000329276	human	ensembl	74_37	+1	known	missense	c.1292	p.A431V	0.906	NULL	pfam_Nop_dom,pfam_NOSIC,pfam_NOP5_N,smart_NOSIC	-	no_errors	NOP56	HGNC	ENSG00000101361	tier1	-	-	40	0	0.00	26	7	21.21
NOP9	0	genome.wustl.edu	37	14	24774255	24774255	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	24774255	24774255	C	T	SNP	NOP9	ENST00000267425	human	ensembl	74_37	+1	known	missense	c.1865	p.A622V	0.901	NULL	superfamily_ARM-type_fold,smart_Pumilio_RNA-bd_rpt	-	no_errors	NOP9	HGNC	ENSG00000196943	tier1	-	-	74	0	0.00	61	12	16.44
NOS1	0	genome.wustl.edu	37	12	117655961	117655961	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	117655961	117655961	G	A	SNP	NOS1	ENST00000317775	human	ensembl	74_37	-1	known	silent	c.4179	p.N1393	1.000	pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,pfam_PDZ,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,superfamily_PDZ,smart_PDZ,pirsf_NOS_euk,pfscan_PDZ,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS1	HGNC	ENSG00000089250	tier1	-	-	32	0	0.00	25	4	13.79
NOS1	0	genome.wustl.edu	37	12	117703196	117703196	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	117703196	117703196	G	-	DEL	NOS1	ENST00000317775	human	ensembl	74_37	-1	known	frame_shift_del	c.2061	p.M688fs	1.000	pfam_NO_synthase_oxygenase_dom,superfamily_NO_synthase_oxygenase_dom,pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,pfam_PDZ,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,superfamily_PDZ,smart_PDZ,pirsf_NOS_euk,pfscan_PDZ,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS1	HGNC	ENSG00000089250	tier1			45	0	0.00	32	10	23.81
NOS3	0	genome.wustl.edu	37	7	150693865	150693865	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	150693865	150693865	C	T	SNP	NOS3	ENST00000297494	human	ensembl	74_37	+1	known	missense	c.434	p.A145V	1.000	pfam_NO_synthase_oxygenase_dom,superfamily_NO_synthase_oxygenase_dom,pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_euk,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS3	HGNC	ENSG00000164867	tier1	-	-	25	0	0.00	21	4	16.00
NOSIP	0	genome.wustl.edu	37	19	50059641	50059641	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	50059641	50059641	C	T	SNP	NOSIP	ENST00000391853	human	ensembl	74_37	-1	known	missense	c.767	p.R256Q	1.000	pirsf_Nitric_oxide_synth-interacting	pirsf_Nitric_oxide_synth-interacting	-	no_errors	NOSIP	HGNC	ENSG00000142546	tier1	-	-	51	0	0.00	29	14	32.56
NPAS3	0	genome.wustl.edu	37	14	34269189	34269189	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	34269189	34269189	G	A	SNP	NPAS3	ENST00000356141	human	ensembl	74_37	+1	known	missense	c.1676	p.R559H	1.000	NULL	pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NPAS3	HGNC	ENSG00000151322	tier1	-	-	63	0	0.00	24	12	33.33
NPBWR1	0	genome.wustl.edu	37	8	53852507	53852507	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	53852507	53852507	G	A	SNP	NPBWR1	ENST00000331251	human	ensembl	74_37	+1	known	missense	c.40	p.A14T	0.546	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Neuropept_B/W_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt,prints_Opioid_rcpt	-	no_errors	NPBWR1	HGNC	ENSG00000183729	tier1	-	-	60	0	0.00	29	14	32.56
NPIPA1	0	genome.wustl.edu	37	16	15018428	15018428	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	15018428	15018428	G	A	SNP	NPIPA1	ENST00000472413	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.646	-	-	-	no_errors	NPIPA1	HGNC	ENSG00000183426	tier1	-	-	287	0	0.00	231	27	10.42
NPIPB11	0	genome.wustl.edu	37	16	29394630	29394630	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	29394630	29394630	A	G	SNP	NPIPB11	ENST00000524087	human	ensembl	74_37	-1	putative	silent	c.1623	p.T541	0.000	NULL	NULL	-	no_errors	NPIPB11	HGNC	ENSG00000254206	tier1	-	-	76	0	0.00	46	6	11.54
NPPC	0	genome.wustl.edu	37	2	232790897	232790897	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	232790897	232790897	G	A	SNP	NPPC	ENST00000295440	human	ensembl	74_37	-1	known	silent	c.63	p.S21	0.990	prints_Natriuretic_peptide_brain	pfam_Natr_peptide,smart_Natr_peptide,prints_C_natriurtcpep,prints_Natriuretic_peptide_brain,prints_Natr_peptide,prints_Natriuretic_peptide_atrial	-	no_errors	NPPC	HGNC	ENSG00000163273	tier1	-	-	25	0	0.00	15	9	37.50
NPW	0	genome.wustl.edu	37	16	2070538	2070538	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	2070538	2070538	T	C	SNP	NPW	ENST00000329610	human	ensembl	74_37	+1	known	missense	c.416	p.L139P	0.693	NULL	prints_Neuropept_W_pre,prints_Neuropept_BW_pre	-	no_errors	NPW	HGNC	ENSG00000183971	tier1	-	-	25	0	0.00	21	10	32.26
NR1H3	0	genome.wustl.edu	37	11	47280983	47280983	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	47280983	47280983	T	C	SNP	NR1H3	ENST00000419652	human	ensembl	74_37	+1	known	missense	c.115	p.W39R	0.000	NULL	NULL	-	no_errors	NR1H3	HGNC	ENSG00000025434	tier1	-	-	54	0	0.00	34	14	29.17
NRARP	0	genome.wustl.edu	37	9	140196214	140196214	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	140196214	140196214	T	C	SNP	NRARP	ENST00000356628	human	ensembl	74_37	-1	known	missense	c.167	p.H56R	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	NRARP	HGNC	ENSG00000198435	tier1	-	-	40	0	0.00	44	8	15.38
NRROS	0	genome.wustl.edu	37	3	196386809	196386809	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	196386809	196386809	G	A	SNP	NRROS	ENST00000328557	human	ensembl	74_37	+1	known	missense	c.295	p.G99S	0.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	NRROS	HGNC	ENSG00000174004	tier1	-	-	70	0	0.00	58	6	9.38
NRROS	0	genome.wustl.edu	37	3	196386875	196386875	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	196386875	196386875	T	C	SNP	NRROS	ENST00000328557	human	ensembl	74_37	+1	known	missense	c.361	p.Y121H	0.895	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	NRROS	HGNC	ENSG00000174004	tier1	-	-	70	0	0.00	42	16	27.59
NRXN1	0	genome.wustl.edu	37	2	50574009	50574011	+	In_Frame_Del	DEL	CGC	CGC	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CGC	CGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	50574009	50574011	CGC	-	DEL	NRXN1	ENST00000342183	human	ensembl	74_37	-1	known	in_frame_del	c.79_77	p.G26in_frame_del	0.998:0.997:0.996	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Neurexin-like,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1			14	0	0.00	16	5	23.81
NSUN7	0	genome.wustl.edu	37	4	40810420	40810420	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	40810420	40810420	C	T	SNP	NSUN7	ENST00000381782	human	ensembl	74_37	+1	known	missense	c.1621	p.R541W	0.948	NULL	pfam_Fmu/NOL1/Nop2p	-	no_errors	NSUN7	HGNC	ENSG00000179299				68	0	0.00	53	3	5.36
NT5M	0	genome.wustl.edu	37	17	17250123	17250123	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	17250123	17250123	C	T	SNP	NT5M	ENST00000389022	human	ensembl	74_37	+1	known	silent	c.549	p.A183	0.038	pfam_5'(3')-deoxyribonucleotidase,superfamily_HAD-like_dom	pfam_5'(3')-deoxyribonucleotidase,superfamily_HAD-like_dom	-	no_errors	NT5M	HGNC	ENSG00000205309	tier1	rs142120102	-	86	0	0.00	55	8	12.70
NTHL1	0	genome.wustl.edu	37	16	2096132	2096133	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	2096132	2096133	-	G	INS	NTHL1	ENST00000219066	human	ensembl	74_37	-1	known	frame_shift_ins	c.375_374	p.V127fs	0.794:1.000	superfamily_DNA_glycosylase	pfam_HhH-GPD_domain,pfam_HhH_motif,superfamily_DNA_glycosylase,smart_HhH-GPD_domain,smart_Endouclease3_FeS-loop_motif	-	no_errors	NTHL1	HGNC	ENSG00000065057	tier1			53	0	0.00	32	6	15.79
NTHL1	0	genome.wustl.edu	37	16	2096239	2096239	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	2096239	2096239	G	T	SNP	NTHL1	ENST00000219066	human	ensembl	74_37	-1	known	missense	c.268	p.Q90K	0.043	NULL	pfam_HhH-GPD_domain,pfam_HhH_motif,superfamily_DNA_glycosylase,smart_HhH-GPD_domain,smart_Endouclease3_FeS-loop_motif	-	no_errors	NTHL1	HGNC	ENSG00000065057	tier1	-	-	44	0	0.00	36	4	10.00
NTM	0	genome.wustl.edu	37	11	131530983	131530984	+	RNA	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	131530983	131530984	-	G	INS	NTM	ENST00000477098	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	NTM	HGNC	ENSG00000182667	tier1			43	0	0.00	22	9	29.03
NTM	0	genome.wustl.edu	37	11	132205624	132205626	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	132205624	132205626	TTT	-	DEL	NTM	ENST00000474900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.011:0.009	-	-	-	no_errors	NTM	HGNC	ENSG00000182667	tier1			19	0	0.00	15	5	25.00
NUGGC	0	genome.wustl.edu	37	8	27903090	27903090	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	27903090	27903090	C	T	SNP	NUGGC	ENST00000341513	human	ensembl	74_37	-1	known	missense	c.1400	p.G467D	0.998	NULL	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase	-	no_errors	NUGGC	HGNC	ENSG00000189233	tier1	-	-	73	0	0.00	92	12	11.54
NUMBL	0	genome.wustl.edu	37	19	41173520	41173520	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	41173520	41173520	G	-	DEL	NUMBL	ENST00000252891	human	ensembl	74_37	-1	known	frame_shift_del	c.1683	p.W562fs	0.596	pirsf_Numb/numb-like	pfam_Numb_domain,pfam_PTB/PI_dom,pfam_PTB,smart_PTB/PI_dom,pirsf_Numb/numb-like,pfscan_PTB/PI_dom	-	no_errors	NUMBL	HGNC	ENSG00000105245	tier1			15	0	0.00	10	3	23.08
NUP107	0	genome.wustl.edu	37	12	69126366	69126366	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	69126366	69126366	A	-	DEL	NUP107	ENST00000401003	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NUP107	HGNC	ENSG00000111581	tier1			34	0	0.00	41	6	12.77
NUP210	0	genome.wustl.edu	37	3	13359206	13359206	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	13359206	13359206	C	T	SNP	NUP210	ENST00000254508	human	ensembl	74_37	-1	known	nonsense	c.5639	p.W1880*	1.000	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182	tier1	-	-	44	0	0.00	48	7	12.73
NUP210	0	genome.wustl.edu	37	3	13417856	13417856	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	13417856	13417856	G	A	SNP	NUP210	ENST00000254508	human	ensembl	74_37	-1	known	missense	c.1228	p.R410C	0.995	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,superfamily_Cadherin-like,smart_Big_2	-	no_errors	NUP210	HGNC	ENSG00000132182	tier1	-	-	67	0	0.00	48	12	20.00
NUP62	0	genome.wustl.edu	37	19	50411539	50411539	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	50411539	50411539	C	A	SNP	NUP62	ENST00000352066	human	ensembl	74_37	-1	known	missense	c.1526	p.R509L	0.958	NULL	pfam_Nucleoporin_NSP1_C	-	no_errors	NUP62	HGNC	ENSG00000213024	tier1	-	-	26	0	0.00	16	4	20.00
NUP93	0	genome.wustl.edu	37	16	56865798	56865798	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	56865798	56865798	G	T	SNP	NUP93	ENST00000308159	human	ensembl	74_37	+1	known	missense	c.1130	p.R377M	1.000	pfam_Nucleoporin_int_Nup93/Nic96	pfam_Nucleoporin_int_Nup93/Nic96	-	no_errors	NUP93	HGNC	ENSG00000102900	tier1	-	-	36	0	0.00	31	8	20.51
NUTM2B	0	genome.wustl.edu	37	10	81471989	81471989	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	81471989	81471989	G	T	SNP	NUTM2B	ENST00000429828	human	ensembl	74_37	+1	known	missense	c.2385	p.Q795H	0.000	NULL	NULL	-	no_errors	NUTM2B	HGNC	ENSG00000188199	tier1	-	-	135	0	0.00	99	20	16.67
NUTM2G	0	genome.wustl.edu	37	9	99694528	99694528	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	99694528	99694528	G	T	SNP	NUTM2G	ENST00000372322	human	ensembl	74_37	+1	known	missense	c.541	p.G181W	0.002	NULL	NULL	-	no_errors	NUTM2G	HGNC	ENSG00000188152	tier1	-	-	376	0	0.00	286	63	18.00
NWD1	0	genome.wustl.edu	37	19	16910773	16910773	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	16910773	16910773	G	A	SNP	NWD1	ENST00000379808	human	ensembl	74_37	+1	known	missense	c.3536	p.R1179H	0.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NWD1	HGNC	ENSG00000188039	tier1	rs150409927	-	37	0	0.00	17	12	41.38
NXPE3	0	genome.wustl.edu	37	3	101540493	101540493	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	101540493	101540493	C	T	SNP	NXPE3	ENST00000273347	human	ensembl	74_37	+1	known	missense	c.1375	p.R459W	0.997	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE3	HGNC	ENSG00000144815	tier1	-	-	49	0	0.00	33	10	22.73
NYAP2	0	genome.wustl.edu	37	2	226446862	226446862	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	226446862	226446862	C	T	SNP	NYAP2	ENST00000272907	human	ensembl	74_37	+1	known	silent	c.729	p.P243	0.116	NULL	NULL	-	no_errors	NYAP2	HGNC	ENSG00000144460	tier1	-	-	39	0	0.00	19	12	38.71
OBSCN	0	genome.wustl.edu	37	1	228434261	228434261	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	228434261	228434261	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.3790	p.V1264M	0.000	pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1	-	-	64	0	0.00	40	5	11.11
OBSL1	0	genome.wustl.edu	37	2	220432509	220432509	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	220432509	220432509	G	A	SNP	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	nonsense	c.1465	p.R489*	0.998	smart_Ig_sub	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006	tier1	rs121918216	-	84	0	0.00	56	10	15.15
OCA2	0	genome.wustl.edu	37	15	28171296	28171297	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	28171296	28171297	-	A	INS	OCA2	ENST00000354638	human	ensembl	74_37	-1	known	frame_shift_ins	c.2056_2055	p.A685fs	1.000:1.000	pfam_Cit_transptr-like_dom,pfam_Na/sul_symport,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	pfam_Cit_transptr-like_dom,pfam_Na/sul_symport,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	-	no_errors	OCA2	HGNC	ENSG00000104044	tier1			38	0	0.00	23	8	25.81
OCIAD1	0	genome.wustl.edu	37	4	48851983	48851983	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	48851983	48851983	C	T	SNP	OCIAD1	ENST00000264312	human	ensembl	74_37	+1	known	silent	c.261	p.Y87	1.000	pfam_OCIA	pfam_OCIA	-	no_errors	OCIAD1	HGNC	ENSG00000109180	tier1	-	-	72	0	0.00	51	20	28.17
OCM	0	genome.wustl.edu	37	7	5922245	5922245	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	5922245	5922245	A	G	SNP	OCM	ENST00000242104	human	ensembl	74_37	+1	known	silent	c.183	p.E61	1.000	smart_EF_hand_dom,pfscan_EF_hand_dom	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	OCM	HGNC	ENSG00000122543	tier1	-	-	118	0	0.00	93	15	13.89
ODF1	0	genome.wustl.edu	37	8	103572965	103572965	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	103572965	103572965	C	T	SNP	ODF1	ENST00000285402	human	ensembl	74_37	+1	known	silent	c.606	p.C202	0.997	pfscan_a-crystallin/Hsp20_dom	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom	-	no_errors	ODF1	HGNC	ENSG00000155087	tier1	-	-	73	0	0.00	59	5	7.81
OGDHL	0	genome.wustl.edu	37	10	50954894	50954894	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	50954894	50954894	C	T	SNP	OGDHL	ENST00000374103	human	ensembl	74_37	-1	known	missense	c.1198	p.A400T	1.000	pfam_DH_E1,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_DH_E1,pfam_Transketolase-like_Pyr-bd,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	OGDHL	HGNC	ENSG00000197444				26	0	0.00	14	3	17.65
OGFOD3	0	genome.wustl.edu	37	17	80373456	80373456	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	80373456	80373456	C	A	SNP	OGFOD3	ENST00000329197	human	ensembl	74_37	-1	known	missense	c.122	p.R41M	0.001	NULL	smart_Pro_4_hyd_alph	-	no_errors	OGFOD3	HGNC	ENSG00000181396	tier1	-	-	100	0	0.00	90	18	16.67
OIP5	0	genome.wustl.edu	37	15	41624711	41624711	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	41624711	41624711	G	-	DEL	OIP5	ENST00000220514	human	ensembl	74_37	-1	known	frame_shift_del	c.49	p.R17fs	0.000	NULL	NULL	-	no_errors	OIP5	HGNC	ENSG00000104147	tier1			59	0	0.00	37	13	26.00
OLFM3	0	genome.wustl.edu	37	1	102296290	102296290	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	102296290	102296290	G	T	SNP	OLFM3	ENST00000338858	human	ensembl	74_37	-1	known	missense	c.370	p.L124M	1.000	pfam_Noelin-1,superfamily_Quino_amine_DH_bsu	pfam_Olfac-like,pfam_Noelin-1,superfamily_Quino_amine_DH_bsu,smart_Olfac-like,pfscan_Olfac-like	-	no_errors	OLFM3	HGNC	ENSG00000118733	tier1	-	-	62	0	0.00	47	4	7.84
OLIG3	0	genome.wustl.edu	37	6	137814989	137814989	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	137814989	137814989	G	A	SNP	OLIG3	ENST00000367734	human	ensembl	74_37	-1	known	missense	c.319	p.R107C	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	OLIG3	HGNC	ENSG00000177468	tier1	-	-	44	0	0.00	25	8	24.24
ONECUT1	0	genome.wustl.edu	37	15	53081028	53081028	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	53081028	53081028	T	C	SNP	ONECUT1	ENST00000305901	human	ensembl	74_37	-1	known	missense	c.1054	p.K352E	1.000	pfam_Hmoeo_CUT,superfamily_Lambda_DNA-bd_dom,pfscan_Hmoeo_CUT	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	ONECUT1	HGNC	ENSG00000169856	tier1	-	-	72	0	0.00	42	13	23.64
OPRD1	0	genome.wustl.edu	37	1	29189683	29189683	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	29189683	29189683	C	A	SNP	OPRD1	ENST00000234961	human	ensembl	74_37	+1	known	missense	c.1007	p.P336H	0.775	prints_Delta_opi_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Delta_opi_rcpt,prints_Opioid_rcpt,prints_Neuropept_B/W_rcpt,prints_Somatstn_rcpt,prints_NPY_rcpt	-	no_errors	OPRD1	HGNC	ENSG00000116329	tier1	-	-	33	0	0.00	24	5	17.24
OPRM1	0	genome.wustl.edu	37	6	154411172	154411172	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	154411172	154411172	T	C	SNP	OPRM1	ENST00000434900	human	ensembl	74_37	+1	known	missense	c.781	p.Y261H	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Mu_opioid_rcpt,prints_GPCR_Rhodpsn,prints_Opioid_rcpt,prints_Somatstn_rcpt,prints_Neuropept_B/W_rcpt,prints_NPY_rcpt	-	no_errors	OPRM1	HGNC	ENSG00000112038	tier1	-	-	54	0	0.00	64	6	8.57
OR10H2	0	genome.wustl.edu	37	19	15838913	15838913	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	15838913	15838913	C	-	DEL	OR10H2	ENST00000305899	human	ensembl	74_37	+1	known	frame_shift_del	c.60	p.H22fs	0.982	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10H2	HGNC	ENSG00000171942	tier1			106	0	0.00	76	10	11.63
OR10H3	0	genome.wustl.edu	37	19	15852911	15852911	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	15852911	15852911	C	T	SNP	OR10H3	ENST00000305892	human	ensembl	74_37	+1	known	missense	c.709	p.H237Y	0.223	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10H3	HGNC	ENSG00000171936	tier1	-	-	74	0	0.00	56	9	13.85
OR10H5	0	genome.wustl.edu	37	19	15904918	15904918	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	15904918	15904918	C	-	DEL	OR10H5	ENST00000308940	human	ensembl	74_37	+1	known	frame_shift_del	c.60	p.H22fs	0.994	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10H5	HGNC	ENSG00000172519	tier1			94	0	0.00	73	10	12.05
OR10Z1	0	genome.wustl.edu	37	1	158577072	158577073	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	158577072	158577073	-	C	INS	OR10Z1	ENST00000361284	human	ensembl	74_37	+1	known	frame_shift_ins	c.844_845	p.L284fs	0.995:0.938	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10Z1	HGNC	ENSG00000198967	tier1			41	0	0.00	41	22	34.92
OR13H1	0	genome.wustl.edu	37	X	130678939	130678939	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	130678939	130678939	C	T	SNP	OR13H1	ENST00000338616	human	ensembl	74_37	+1	known	missense	c.892	p.R298W	0.197	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR13H1	HGNC	ENSG00000171054	tier1	-	-	25	0	0.00	15	6	28.57
OR1J2	0	genome.wustl.edu	37	9	125273680	125273680	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	125273680	125273680	C	A	SNP	OR1J2	ENST00000335302	human	ensembl	74_37	+1	known	missense	c.600	p.F200L	0.296	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1J2	HGNC	ENSG00000197233	tier1	-	-	95	0	0.00	46	10	17.86
OR1N1	0	genome.wustl.edu	37	9	125289191	125289191	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	125289191	125289191	G	-	DEL	OR1N1	ENST00000304880	human	ensembl	74_37	-1	known	frame_shift_del	c.382	p.L128fs	0.800	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1N1	HGNC	ENSG00000171505	tier1			31	0	0.00	42	7	14.29
OR2A14	0	genome.wustl.edu	37	7	143826931	143826931	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	143826931	143826931	C	T	SNP	OR2A14	ENST00000408899	human	ensembl	74_37	+1	known	silent	c.726	p.S242	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2A14	HGNC	ENSG00000221938	tier1	-	-	99	0	0.00	86	30	25.86
OR2AE1	0	genome.wustl.edu	37	7	99474005	99474005	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	99474005	99474005	C	T	SNP	OR2AE1	ENST00000316368	human	ensembl	74_37	-1	known	missense	c.652	p.V218I	0.003	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2AE1	HGNC	ENSG00000244623	tier1	-	-	37	0	0.00	28	5	15.15
OR2L13	0	genome.wustl.edu	37	1	248263058	248263059	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	248263058	248263059	CT	-	DEL	OR2L13	ENST00000358120	human	ensembl	74_37	+1	known	frame_shift_del	c.381_382	p.Y130fs	0.005:0.989	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2L13	HGNC	ENSG00000196071	tier1			48	0	0.00	32	3	8.57
OR2L13	0	genome.wustl.edu	37	1	248263222	248263222	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	248263222	248263222	C	T	SNP	OR2L13	ENST00000358120	human	ensembl	74_37	+1	known	missense	c.545	p.A182V	0.043	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2L13	HGNC	ENSG00000196071	tier1	-	-	36	0	0.00	22	6	21.43
OR2M2	0	genome.wustl.edu	37	1	248343303	248343303	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	248343303	248343303	C	T	SNP	OR2M2	ENST00000359682	human	ensembl	74_37	+1	known	nonsense	c.16	p.Q6*	0.970	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M2	HGNC	ENSG00000198601				93	0	0.00	70	4	5.41
OR4B1	0	genome.wustl.edu	37	11	48238936	48238936	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	48238936	48238936	T	A	SNP	OR4B1	ENST00000309562	human	ensembl	74_37	+1	known	missense	c.575	p.M192K	0.012	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4B1	HGNC	ENSG00000175619	tier1	-	-	75	0	0.00	45	24	34.78
OR4F21	0	genome.wustl.edu	37	8	116995	116996	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	116995	116996	-	G	INS	OR4F21	ENST00000320901	human	ensembl	74_37	-1	known	frame_shift_ins	c.30_29	p.E11fs	0.272:0.213	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4F21	HGNC	ENSG00000176269	tier1			58	0	0.00	58	4	6.45
OR4X2	0	genome.wustl.edu	37	11	48267012	48267012	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	48267012	48267012	C	T	SNP	OR4X2	ENST00000302329	human	ensembl	74_37	+1	known	silent	c.357	p.C119	0.996	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4X2	HGNC	ENSG00000172208	tier1	-	-	55	0	0.00	54	16	22.86
OR51E1	0	genome.wustl.edu	37	11	4674493	4674493	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	4674493	4674493	A	G	SNP	OR51E1	ENST00000396952	human	ensembl	74_37	+1	known	missense	c.737	p.H246R	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51E1	HGNC	ENSG00000180785	tier1	-	-	44	0	0.00	34	20	37.04
OR51E2	0	genome.wustl.edu	37	11	4703475	4703475	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	4703475	4703475	A	-	DEL	OR51E2	ENST00000396950	human	ensembl	74_37	-1	known	frame_shift_del	c.467	p.F156fs	0.027	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51E2	HGNC	ENSG00000167332	tier1			41	0	0.00	20	15	42.86
OR51S1	0	genome.wustl.edu	37	11	4870355	4870355	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	4870355	4870355	T	C	SNP	OR51S1	ENST00000322101	human	ensembl	74_37	-1	known	silent	c.84	p.L28	0.212	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51S1	HGNC	ENSG00000176922	tier1	-	-	30	0	0.00	35	7	16.67
OR52B6	0	genome.wustl.edu	37	11	5603090	5603090	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	5603090	5603090	A	G	SNP	OR52B6	ENST00000345043	human	ensembl	74_37	+1	known	silent	c.984	p.S328	0.832	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52B6	HGNC	ENSG00000187747	tier1	-	-	44	0	0.00	41	8	16.33
OR52N4	0	genome.wustl.edu	37	11	5776885	5776885	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	5776885	5776885	T	C	SNP	OR52N4	ENST00000317254	human	ensembl	74_37	+1	known	silent	c.915	p.C305	0.464	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52N4	HGNC	ENSG00000181074	tier1	-	-	57	0	0.00	40	5	11.11
OR5D14	0	genome.wustl.edu	37	11	55563075	55563075	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	55563075	55563075	C	T	SNP	OR5D14	ENST00000335605	human	ensembl	74_37	+1	known	missense	c.44	p.A15V	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D14	HGNC	ENSG00000186113	tier1	-	-	55	0	0.00	56	10	15.15
OR5I1	0	genome.wustl.edu	37	11	55703222	55703223	+	In_Frame_Ins	INS	-	-	GAT			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	55703222	55703223	-	GAT	INS	OR5I1	ENST00000301532	human	ensembl	74_37	-1	known	in_frame_ins	c.655_654	p.218in_frame_insI	0.977:0.940	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5I1	HGNC	ENSG00000167825	tier1			25	0	0.00	27	4	12.90
OR5M3	0	genome.wustl.edu	37	11	56237709	56237709	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	56237709	56237709	T	-	DEL	OR5M3	ENST00000312240	human	ensembl	74_37	-1	known	frame_shift_del	c.265	p.T89fs	0.002	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M3	HGNC	ENSG00000174937	tier1			89	0	0.00	68	13	16.05
OR6C75	0	genome.wustl.edu	37	12	55759191	55759192	+	Frame_Shift_Ins	INS	-	-	TT			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	55759191	55759192	-	TT	INS	OR6C75	ENST00000343399	human	ensembl	74_37	+1	known	frame_shift_ins	c.297_298	p.I102fs	0.002:0.964	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6C75	HGNC	ENSG00000187857	tier1			33	0	0.00	36	5	12.20
OR6K2	0	genome.wustl.edu	37	1	158669503	158669503	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	158669503	158669503	A	-	DEL	OR6K2	ENST00000359610	human	ensembl	74_37	-1	known	frame_shift_del	c.940	p.S314fs	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6K2	HGNC	ENSG00000196171	tier1			65	0	0.00	38	6	13.64
OR6X1	0	genome.wustl.edu	37	11	123624444	123624444	+	Silent	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	123624444	123624444	T	G	SNP	OR6X1	ENST00000327930	human	ensembl	74_37	-1	known	silent	c.783	p.T261	0.744	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6X1	HGNC	ENSG00000221931	tier1	-	-	49	0	0.00	36	4	10.00
OR7A17	0	genome.wustl.edu	37	19	14991541	14991541	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	14991541	14991541	A	G	SNP	OR7A17	ENST00000327462	human	ensembl	74_37	-1	known	silent	c.627	p.G209	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7A17	HGNC	ENSG00000185385	tier1	-	-	66	0	0.00	32	16	33.33
OR7D2	0	genome.wustl.edu	37	19	9297112	9297112	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	9297112	9297112	T	G	SNP	OR7D2	ENST00000344248	human	ensembl	74_37	+1	known	missense	c.655	p.S219A	0.001	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7D2	HGNC	ENSG00000188000	tier1	-	-	52	0	0.00	39	13	25.00
OR7E24	0	genome.wustl.edu	37	19	9361741	9361741	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	9361741	9361741	T	-	DEL	OR7E24	ENST00000456448	human	ensembl	74_37	+1	known	frame_shift_del	c.22	p.F11fs	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR7E24	HGNC	ENSG00000237521	tier1			72	0	0.00	42	13	23.64
OR9Q2	0	genome.wustl.edu	37	11	57958566	57958566	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	57958566	57958566	T	G	SNP	OR9Q2	ENST00000311591	human	ensembl	74_37	+1	known	missense	c.604	p.F202V	0.794	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR9Q2	HGNC	ENSG00000186513	tier1	-	-	39	0	0.00	28	4	12.50
ORMDL3	0	genome.wustl.edu	37	17	38077409	38077409	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	38077409	38077409	C	T	SNP	ORMDL3	ENST00000579287	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.837	-	-	-	no_errors	ORMDL3	HGNC	ENSG00000172057	tier1	-	-	33	0	0.00	18	10	35.71
OSBPL3	0	genome.wustl.edu	37	7	24932011	24932011	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	24932011	24932011	C	T	SNP	OSBPL3	ENST00000313367	human	ensembl	74_37	-1	known	silent	c.81	p.K27	1.000	NULL	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL3	HGNC	ENSG00000070882	tier1	-	-	40	0	0.00	43	5	10.42
OSMR	0	genome.wustl.edu	37	5	38904107	38904107	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	38904107	38904107	G	A	SNP	OSMR	ENST00000274276	human	ensembl	74_37	+1	known	missense	c.1115	p.G372D	0.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	OSMR	HGNC	ENSG00000145623	tier1	-	-	74	0	0.00	66	4	5.71
OSTM1-AS1	0	genome.wustl.edu	37	6	108478898	108478898	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	108478898	108478898	A	G	SNP	OSTM1-AS1	ENST00000441184	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	OSTM1-AS1	HGNC	ENSG00000225174	tier1	-	-	93	0	0.00	90	9	9.09
OTOF	0	genome.wustl.edu	37	2	26700559	26700559	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	26700559	26700559	C	T	SNP	OTOF	ENST00000272371	human	ensembl	74_37	-1	known	missense	c.2273	p.R758H	1.000	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	OTOF	HGNC	ENSG00000115155	tier1	-	-	62	0	0.00	41	20	32.79
OTOF	0	genome.wustl.edu	37	2	26700658	26700658	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	26700658	26700658	G	A	SNP	OTOF	ENST00000402415	human	ensembl	74_37	-1	known	missense	c.104	p.A35V	0.000	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,superfamily_C2_dom,smart_C2_dom,prints_C2_dom,pfscan_C2_dom	-	no_errors	OTOF	HGNC	ENSG00000115155	tier1	-	-	47	0	0.00	27	4	12.90
OTOF	0	genome.wustl.edu	37	2	26725267	26725267	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	26725267	26725267	T	C	SNP	OTOF	ENST00000272371	human	ensembl	74_37	-1	known	missense	c.611	p.D204G	1.000	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	OTOF	HGNC	ENSG00000115155	tier1	-	-	42	0	0.00	28	16	36.36
OTOF	0	genome.wustl.edu	37	2	26705387	26705387	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	26705387	26705387	G	T	SNP	OTOF	ENST00000272371	human	ensembl	74_37	-1	known	missense	c.1466	p.P489H	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	OTOF	HGNC	ENSG00000115155				31	0	0.00	22	3	12.00
OTOF	0	genome.wustl.edu	37	2	26741971	26741971	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	26741971	26741971	G	A	SNP	OTOF	ENST00000272371	human	ensembl	74_37	-1	known	silent	c.234	p.I78	0.944	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	OTOF	HGNC	ENSG00000115155				29	0	0.00	22	3	12.00
OTOG	0	genome.wustl.edu	37	11	17623888	17623888	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	17623888	17623888	C	A	SNP	OTOG	ENST00000399391	human	ensembl	74_37	+1	known	missense	c.3877	p.L1293M	1.000	pfam_AbfB,superfamily_AbfB	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_AbfB,pfam_TIL_dom,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom	-	no_errors	OTOG	HGNC	ENSG00000188162	tier1	-	-	31	0	0.00	18	7	28.00
OTOP3	0	genome.wustl.edu	37	17	72945397	72945397	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	72945397	72945397	G	T	SNP	OTOP3	ENST00000328801	human	ensembl	74_37	+1	known	missense	c.1677	p.K559N	0.025	pfam_Otopetrin	pfam_Otopetrin	-	no_errors	OTOP3	HGNC	ENSG00000182938	tier1	-	-	88	0	0.00	65	4	5.80
OTUD6B	0	genome.wustl.edu	37	8	92090607	92090607	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	92090607	92090607	G	T	SNP	OTUD6B	ENST00000285420	human	ensembl	74_37	+1	known	missense	c.429	p.K143N	0.997	NULL	pfam_OTU,pfam_Peptidase_C65_otubain,pfscan_OTU	-	no_errors	OTUD6B	HGNC	ENSG00000155100	tier1	-	-	40	0	0.00	28	15	34.88
OTUD7A	0	genome.wustl.edu	37	15	31776544	31776544	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	31776544	31776544	C	A	SNP	OTUD7A	ENST00000382902	human	ensembl	74_37	-1	known	silent	c.1755	p.S585	0.847	NULL	pfam_OTU,superfamily_UBA-like,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	OTUD7A	HGNC	ENSG00000169918	tier1	-	-	54	0	0.00	27	7	20.59
OTUD7B	0	genome.wustl.edu	37	1	149936187	149936187	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	149936187	149936187	T	C	SNP	OTUD7B	ENST00000369135	human	ensembl	74_37	-1	known	missense	c.692	p.K231R	1.000	pfam_OTU,pfscan_OTU	pfam_OTU,superfamily_UBA-like,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	OTUD7B	HGNC	ENSG00000163113	tier1	-	-	64	0	0.00	53	4	7.02
OTUD7B	0	genome.wustl.edu	37	1	149949403	149949403	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	149949403	149949403	A	G	SNP	OTUD7B	ENST00000369135	human	ensembl	74_37	-1	known	missense	c.43	p.S15P	1.000	superfamily_UBA-like	pfam_OTU,superfamily_UBA-like,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	OTUD7B	HGNC	ENSG00000163113	tier1	-	-	53	0	0.00	47	12	20.34
OTX2	0	genome.wustl.edu	37	14	57271049	57271049	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	57271049	57271049	G	-	DEL	OTX2	ENST00000339475	human	ensembl	74_37	-1	known	frame_shift_del	c.130	p.R44fs	0.947	superfamily_Homeodomain-like,pfscan_Homeobox_dom	pfam_Otx_TF_C,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Otx2_TF,prints_Otx_TF	-	no_errors	OTX2	HGNC	ENSG00000165588	tier1			56	0	0.00	41	6	12.77
OVGP1	0	genome.wustl.edu	37	1	111958968	111958968	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	111958968	111958968	A	G	SNP	OVGP1	ENST00000369732	human	ensembl	74_37	-1	known	missense	c.1133	p.L378S	0.239	superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	-	no_errors	OVGP1	HGNC	ENSG00000085465	tier1	-	-	50	0	0.00	37	10	21.28
OXNAD1	0	genome.wustl.edu	37	3	16343348	16343348	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	16343348	16343348	A	-	DEL	OXNAD1	ENST00000544043	human	ensembl	74_37	+1	known	frame_shift_del	c.702	p.N236fs	0.128	pfam_OxRdtase_FAD/NAD-bd,pfam_Fe_red_NAD-bd_6	pfam_OxRdtase_FAD/NAD-bd,pfam_Fe_red_NAD-bd_6,superfamily_Riboflavin_synthase-like_b-brl,prints_Phe_hydroxylase,prints_NADH-Cyt_B5_reductase	-	no_errors	OXNAD1	HGNC	ENSG00000154814	tier1			40	0	0.00	18	12	40.00
OXTR	0	genome.wustl.edu	37	3	8809115	8809115	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	8809115	8809115	C	-	DEL	OXTR	ENST00000316793	human	ensembl	74_37	-1	known	frame_shift_del	c.759	p.R254fs	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Oxytocn_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Oxytocn_rcpt,prints_Vasoprsn_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OXTR	HGNC	ENSG00000180914	tier1			36	0	0.00	26	6	18.75
P2RX1	0	genome.wustl.edu	37	17	3808604	3808604	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	3808604	3808604	G	A	SNP	P2RX1	ENST00000225538	human	ensembl	74_37	-1	known	silent	c.195	p.V65	0.990	pfam_P2X_purnocptor,tigrfam_P2X_purnocptor	pfam_P2X_purnocptor,prints_P2X1_purnocptor,prints_P2X_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX1	HGNC	ENSG00000108405	tier1	-	-	73	0	0.00	69	7	9.21
P2RY2	0	genome.wustl.edu	37	11	72946284	72946284	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	72946284	72946284	G	A	SNP	P2RY2	ENST00000311131	human	ensembl	74_37	+1	known	silent	c.1080	p.R360	0.000	prints_P2Y2_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_P2Y2_rcpt,prints_GPCR_Rhodpsn,prints_P2Y4_rcpt	-	no_errors	P2RY2	HGNC	ENSG00000175591	tier1	-	-	31	0	0.00	15	4	21.05
P2RY8	0	genome.wustl.edu	37	X	1584894	1584894	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	1584894	1584894	G	A	SNP	P2RY8	ENST00000381297	human	ensembl	74_37	-1	known	silent	c.558	p.S186	0.174	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Protea_act_rcpt	-	no_errors	P2RY8	HGNC	ENSG00000182162	tier1	-	-	56	0	0.00	21	9	30.00
PACRG	0	genome.wustl.edu	37	6	163149263	163149263	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	163149263	163149263	G	T	SNP	PACRG	ENST00000542669	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PACRG	HGNC	ENSG00000112530	tier1	-	-	38	0	0.00	20	3	13.04
PACRG	0	genome.wustl.edu	37	6	163149330	163149330	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	163149330	163149330	C	A	SNP	PACRG	ENST00000337019	human	ensembl	74_37	+1	known	silent	c.63	p.T21	1.000	NULL	pfam_Parkin_co-regulated_protein,superfamily_ARM-type_fold	-	no_errors	PACRG	HGNC	ENSG00000112530	tier1	-	-	45	0	0.00	32	5	13.51
PAFAH1B1	0	genome.wustl.edu	37	17	2585247	2585247	+	RNA	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	2585247	2585247	A	T	SNP	PAFAH1B1	ENST00000397193	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PAFAH1B1	HGNC	ENSG00000007168	tier1	-	-	56	0	0.00	44	4	8.33
PAFAH1B1	0	genome.wustl.edu	37	17	2576016	2576016	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	2576016	2576016	G	A	SNP	PAFAH1B1	ENST00000397195	human	ensembl	74_37	+1	known	silent	c.636	p.R212	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_Dynein_regulator_LIS1,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,pfam_LisH_dimerisation_subgr,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_WD40_repeat,pirsf_Dynein_regulator_LIS1,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PAFAH1B1	HGNC	ENSG00000007168				35	0	0.00	23	2	8.00
PAK4	0	genome.wustl.edu	37	19	39663724	39663724	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	39663724	39663724	C	T	SNP	PAK4	ENST00000358301	human	ensembl	74_37	+1	known	missense	c.371	p.T124M	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_CRIB_dom,superfamily_Kinase-like_dom,smart_CRIB_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRIB_dom,pfscan_Prot_kinase_dom	-	no_errors	PAK4	HGNC	ENSG00000130669				31	0	0.00	19	3	13.64
PALLD	0	genome.wustl.edu	37	4	169611845	169611845	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	169611845	169611845	G	A	SNP	PALLD	ENST00000261509	human	ensembl	74_37	+1	known	missense	c.1427	p.R476Q	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PALLD	HGNC	ENSG00000129116	tier1	-	-	72	0	0.00	60	10	14.29
PALLD	0	genome.wustl.edu	37	4	169812208	169812208	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	169812208	169812208	G	T	SNP	PALLD	ENST00000261509	human	ensembl	74_37	+1	known	silent	c.2100	p.P700	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	PALLD	HGNC	ENSG00000129116				17	0	0.00	29	3	9.38
PALM2-AKAP2	0	genome.wustl.edu	37	9	112899369	112899370	+	In_Frame_Ins	INS	-	-	CAG			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	112899369	112899370	-	CAG	INS	PALM2-AKAP2	ENST00000374530	human	ensembl	74_37	+1	known	in_frame_ins	c.1545_1546	p.519in_frame_insQ	0.145:0.823	NULL	pfam_Paralemmin,pfam_RII_binding_1	-	no_errors	PALM2-AKAP2	HGNC	ENSG00000157654	tier1			27	0	0.00	17	10	37.04
PANK1	0	genome.wustl.edu	37	10	91353582	91353582	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	91353582	91353582	G	A	SNP	PANK1	ENST00000307534	human	ensembl	74_37	-1	known	missense	c.1475	p.A492V	1.000	pfam_Type_II_PanK,tigrfam_Type_II_PanK	pfam_Type_II_PanK,tigrfam_Type_II_PanK	-	no_errors	PANK1	HGNC	ENSG00000152782	tier1	-	-	83	0	0.00	75	10	11.76
PANK4	0	genome.wustl.edu	37	1	2457955	2457955	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	2457955	2457955	G	-	DEL	PANK4	ENST00000378466	human	ensembl	74_37	-1	known	frame_shift_del	c.72	p.D25fs	0.998	pirsf_PanK_long	pfam_Type_II_PanK,pfam_DUF89,superfamily_DUF89,pirsf_PanK_long,tigrfam_Type_II_PanK	-	no_errors	PANK4	HGNC	ENSG00000157881	tier1			127	0	0.00	76	8	9.52
PAPD5	0	genome.wustl.edu	37	16	50264212	50264215	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	50264212	50264215	AAAA	-	DEL	PAPD5	ENST00000573002	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.053:0.065:0.065:0.056	-	-	-	no_errors	PAPD5	HGNC	ENSG00000121274	tier1			19	0	0.00	10	4	28.57
PAQR9	0	genome.wustl.edu	37	3	142681484	142681484	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	142681484	142681484	C	T	SNP	PAQR9	ENST00000340634	human	ensembl	74_37	-1	known	missense	c.695	p.R232H	1.000	pfam_HlyIII-related	pfam_HlyIII-related	-	no_errors	PAQR9	HGNC	ENSG00000188582	tier1	-	-	39	0	0.00	27	6	18.18
PARP6	0	genome.wustl.edu	37	15	72559896	72559896	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	72559896	72559896	C	T	SNP	PARP6	ENST00000413097	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	PARP6	HGNC	ENSG00000137817	tier1	-	-	28	0	0.00	36	6	14.29
PATZ1	0	genome.wustl.edu	37	22	31737641	31737641	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	31737641	31737641	G	A	SNP	PATZ1	ENST00000215919	human	ensembl	74_37	-1	known	missense	c.1364	p.P455L	1.000	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	PATZ1	HGNC	ENSG00000100105				33	0	0.00	25	4	13.79
PAX1	0	genome.wustl.edu	37	20	21687474	21687474	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	21687474	21687474	G	A	SNP	PAX1	ENST00000398485	human	ensembl	74_37	+1	known	missense	c.685	p.A229T	1.000	NULL	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX1	HGNC	ENSG00000125813	tier1	-	-	93	0	0.00	70	13	15.66
PBRM1	0	genome.wustl.edu	37	3	52678784	52678784	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	52678784	52678784	T	-	DEL	PBRM1	ENST00000296302	human	ensembl	74_37	-1	known	frame_shift_del	c.835	p.I279fs	1.000	superfamily_Bromodomain,smart_Bromodomain	pfam_Bromodomain,pfam_BAH_dom,pfam_HMG_box_dom,superfamily_Bromodomain,superfamily_HMG_box_dom,smart_Bromodomain,smart_BAH_dom,smart_HMG_box_dom,pfscan_BAH_dom,pfscan_HMG_box_dom,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	PBRM1	HGNC	ENSG00000163939	tier1			105	0	0.00	76	18	19.15
PC	0	genome.wustl.edu	37	11	66618621	66618621	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	66618621	66618621	A	G	SNP	PC	ENST00000393958	human	ensembl	74_37	-1	known	missense	c.2113	p.S705P	1.000	pfam_PYR_CT,pirsf_Pyruv_COase,pfscan_PYR_CT,tigrfam_Pyruv_COase	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_Carboxylase_cons_dom,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_PYR_CT,pfam_Biotin_lipoyl,pfam_Dala_Dala_lig_C,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pirsf_Pyruv_COase,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_PYR_CT,pfscan_Biotin_lipoyl,tigrfam_Pyruv_COase	-	no_errors	PC	HGNC	ENSG00000173599	tier1	-	-	120	0	0.00	126	20	13.70
PCDHA11	0	genome.wustl.edu	37	5	140249224	140249224	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140249224	140249224	C	A	SNP	PCDHA11	ENST00000398640	human	ensembl	74_37	+1	known	missense	c.536	p.S179Y	0.185	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC	ENSG00000249158	tier1	-	-	33	0	0.00	39	4	9.30
PCDHA12	0	genome.wustl.edu	37	5	140256353	140256353	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140256353	140256353	G	A	SNP	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	silent	c.1296	p.S432	0.010	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664	tier1	-	-	140	0	0.00	80	29	26.61
PCDHA12	0	genome.wustl.edu	37	5	140256977	140256977	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140256977	140256977	G	A	SNP	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	silent	c.1920	p.A640	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664	tier1	-	-	130	0	0.00	77	39	33.62
PCDHA12	0	genome.wustl.edu	37	5	140255703	140255703	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140255703	140255703	G	T	SNP	PCDHA12	ENST00000398631	human	ensembl	74_37	+1	known	missense	c.646	p.D216Y	0.992	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA12	HGNC	ENSG00000251664				32	0	0.00	31	2	6.06
PCDHA2	0	genome.wustl.edu	37	5	140175608	140175608	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140175608	140175608	G	A	SNP	PCDHA2	ENST00000526136	human	ensembl	74_37	+1	known	silent	c.1059	p.T353	0.229	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA2	HGNC	ENSG00000204969	tier1	-	-	36	0	0.00	43	23	34.85
PCDHA7	0	genome.wustl.edu	37	5	140215581	140215581	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140215581	140215581	G	A	SNP	PCDHA7	ENST00000525929	human	ensembl	74_37	+1	known	missense	c.1613	p.R538H	0.988	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA7	HGNC	ENSG00000204963	tier1	-	-	167	0	0.00	109	47	30.13
PCDHA9	0	genome.wustl.edu	37	5	140229589	140229589	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140229589	140229589	G	A	SNP	PCDHA9	ENST00000532602	human	ensembl	74_37	+1	known	silent	c.1509	p.S503	0.770	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA9	HGNC	ENSG00000204961	tier1	-	-	152	0	0.00	155	25	13.81
PCDHAC2	0	genome.wustl.edu	37	5	140347009	140347009	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140347009	140347009	G	A	SNP	PCDHAC2	ENST00000289269	human	ensembl	74_37	+1	known	missense	c.658	p.A220T	0.001	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHAC2	HGNC	ENSG00000243232	tier1	-	-	20	0	0.00	24	6	20.00
PCDHB11	0	genome.wustl.edu	37	5	140580070	140580070	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140580070	140580070	A	G	SNP	PCDHB11	ENST00000354757	human	ensembl	74_37	+1	known	silent	c.723	p.E241	0.581	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHB11	HGNC	ENSG00000197479	tier1	-	-	57	0	0.00	43	9	17.31
PCDHB11	0	genome.wustl.edu	37	5	140579984	140579984	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140579984	140579984	T	A	SNP	PCDHB11	ENST00000354757	human	ensembl	74_37	+1	known	missense	c.637	p.S213T	0.039	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHB11	HGNC	ENSG00000197479				46	0	0.00	31	8	20.51
PCDHB11	0	genome.wustl.edu	37	5	140579998	140579998	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140579998	140579998	T	C	SNP	PCDHB11	ENST00000354757	human	ensembl	74_37	+1	known	silent	c.651	p.G217	0.342	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHB11	HGNC	ENSG00000197479				55	0	0.00	28	7	19.44
PCDHB11	0	genome.wustl.edu	37	5	140580049	140580049	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140580049	140580049	C	T	SNP	PCDHB11	ENST00000354757	human	ensembl	74_37	+1	known	silent	c.702	p.D234	0.025	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHB11	HGNC	ENSG00000197479				60	0	0.00	41	5	10.87
PCDHB13	0	genome.wustl.edu	37	5	140595476	140595476	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140595476	140595476	G	A	SNP	PCDHB13	ENST00000341948	human	ensembl	74_37	+1	known	missense	c.1781	p.G594D	0.849	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB13	HGNC	ENSG00000187372	tier1	-	-	93	0	0.00	117	12	9.30
PCDHB14	0	genome.wustl.edu	37	5	140603942	140603942	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140603942	140603942	C	T	SNP	PCDHB14	ENST00000239449	human	ensembl	74_37	+1	known	missense	c.865	p.R289C	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB14	HGNC	ENSG00000120327	tier1	-	-	67	0	0.00	48	16	25.00
PCDHB14	0	genome.wustl.edu	37	5	140604226	140604226	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140604226	140604226	C	T	SNP	PCDHB14	ENST00000239449	human	ensembl	74_37	+1	known	silent	c.1149	p.C383	0.985	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB14	HGNC	ENSG00000120327	tier1	-	-	59	0	0.00	50	8	13.79
PCDHB4	0	genome.wustl.edu	37	5	140503443	140503443	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140503443	140503443	C	T	SNP	PCDHB4	ENST00000194152	human	ensembl	74_37	+1	known	silent	c.1863	p.G621	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB4	HGNC	ENSG00000081818	tier1	-	-	142	0	0.00	99	51	34.00
PCDHB8	0	genome.wustl.edu	37	5	140559488	140559488	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140559488	140559488	G	A	SNP	PCDHB8	ENST00000239444	human	ensembl	74_37	+1	known	missense	c.1873	p.V625M	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB8	HGNC	ENSG00000120322	tier1	-	-	211	0	0.00	165	18	9.84
PCDHGA1	0	genome.wustl.edu	37	5	140710767	140710767	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140710767	140710767	C	T	SNP	PCDHGA1	ENST00000517417	human	ensembl	74_37	+1	known	silent	c.516	p.L172	0.984	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA1	HGNC	ENSG00000204956				24	0	0.00	23	2	8.00
PCDHGA3	0	genome.wustl.edu	37	5	140724854	140724854	+	Nonsense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140724854	140724854	T	A	SNP	PCDHGA3	ENST00000253812	human	ensembl	74_37	+1	known	nonsense	c.1254	p.Y418*	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA3	HGNC	ENSG00000254245	tier1	-	-	31	0	0.00	27	8	22.86
PCDHGA3	0	genome.wustl.edu	37	5	140725964	140725964	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140725964	140725964	C	T	SNP	PCDHGA3	ENST00000253812	human	ensembl	74_37	+1	known	silent	c.2364	p.S788	0.540	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA3	HGNC	ENSG00000254245	tier1	-	-	87	0	0.00	76	23	23.23
PCDHGA4	0	genome.wustl.edu	37	5	140735562	140735562	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140735562	140735562	A	G	SNP	PCDHGA4	ENST00000571252	human	ensembl	74_37	+1	known	silent	c.795	p.K265	0.988	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA4	HGNC	ENSG00000262576	tier1	-	-	34	0	0.00	19	9	32.14
PCDHGB1	0	genome.wustl.edu	37	5	140731905	140731905	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140731905	140731905	C	T	SNP	PCDHGB1	ENST00000523390	human	ensembl	74_37	+1	known	missense	c.2078	p.A693V	0.999	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB1	HGNC	ENSG00000254221	tier1	-	-	44	0	0.00	25	11	30.56
PCDHGB3	0	genome.wustl.edu	37	5	140751606	140751606	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140751606	140751606	C	T	SNP	PCDHGB3	ENST00000576222	human	ensembl	74_37	+1	known	missense	c.1645	p.R549C	0.159	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB3	HGNC	ENSG00000262209	tier1	-	-	128	0	0.00	81	28	25.69
PCDHGC3	0	genome.wustl.edu	37	5	140856435	140856435	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140856435	140856435	C	T	SNP	PCDHGC3	ENST00000308177	human	ensembl	74_37	+1	known	missense	c.752	p.A251V	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC3	HGNC	ENSG00000240184	tier1	-	-	32	0	0.00	36	7	16.28
PCDHGC5	0	genome.wustl.edu	37	5	140870295	140870295	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	140870295	140870295	T	A	SNP	PCDHGC5	ENST00000252087	human	ensembl	74_37	+1	known	missense	c.1488	p.N496K	0.071	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC5	HGNC	ENSG00000240764	tier1	-	-	37	0	0.00	31	9	22.50
PCLO	0	genome.wustl.edu	37	7	82578944	82578944	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	82578944	82578944	G	A	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	nonsense	c.10960	p.Q3654*	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	66	0	0.00	54	22	28.95
PCNXL2	0	genome.wustl.edu	37	1	233388513	233388513	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	233388513	233388513	T	-	DEL	PCNXL2	ENST00000258229	human	ensembl	74_37	-1	known	frame_shift_del	c.1856	p.K619fs	1.000	NULL	pfam_Pecanex,superfamily_Trypsin-like_Pept_dom	-	no_errors	PCNXL2	HGNC	ENSG00000135749	tier1			39	0	0.00	36	9	20.00
PCOLCE	0	genome.wustl.edu	37	7	100205580	100205580	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	100205580	100205580	G	T	SNP	PCOLCE	ENST00000223061	human	ensembl	74_37	+1	known	missense	c.1204	p.G402C	1.000	pfam_Netrin_module_non-TIMP,superfamily_TIMP-like_OB-fold,smart_Netrin_module_non-TIMP,pfscan_Netrin_domain	pfam_CUB_dom,pfam_Netrin_module_non-TIMP,superfamily_CUB_dom,superfamily_TIMP-like_OB-fold,smart_CUB_dom,smart_Netrin_module_non-TIMP,pfscan_CUB_dom,pfscan_Netrin_domain	-	no_errors	PCOLCE	HGNC	ENSG00000106333	tier1	-	-	82	0	0.00	52	16	23.53
PCSK2	0	genome.wustl.edu	37	20	17434447	17434447	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	17434447	17434447	G	T	SNP	PCSK2	ENST00000262545	human	ensembl	74_37	+1	known	missense	c.946	p.D316Y	1.000	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK2	HGNC	ENSG00000125851	tier1	-	-	112	0	0.00	73	8	9.88
PCYOX1L	0	genome.wustl.edu	37	5	148747925	148747925	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	148747925	148747925	C	-	DEL	PCYOX1L	ENST00000274569	human	ensembl	74_37	+1	known	frame_shift_del	c.1193	p.K400fs	1.000	pfam_Prenylcys_lyase,pirsf_Prenylcysteine_Oxase	pfam_Prenylcys_lyase,pirsf_Prenylcysteine_Oxase	-	no_errors	PCYOX1L	HGNC	ENSG00000145882	tier1			130	0	0.00	96	13	11.93
PCYT1A	0	genome.wustl.edu	37	3	195974305	195974305	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	195974305	195974305	C	T	SNP	PCYT1A	ENST00000292823	human	ensembl	74_37	-1	known	missense	c.419	p.R140H	1.000	pfam_Cyt_trans-like,tigrfam_Cyt_trans-like	pfam_Cyt_trans-like,superfamily_NA-bd_OB-fold,tigrfam_Cyt_trans-like	-	no_errors	PCYT1A	HGNC	ENSG00000161217	tier1	-	-	59	0	0.00	42	10	19.23
PDCD1	0	genome.wustl.edu	37	2	242795103	242795104	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	242795103	242795104	-	G	INS	PDCD1	ENST00000334409	human	ensembl	74_37	-1	known	frame_shift_ins	c.106_105	p.T35fs	0.986:0.990	pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PDCD1	HGNC	ENSG00000188389	tier1			57	0	0.00	47	11	18.97
PDCD10	0	genome.wustl.edu	37	3	167437900	167437900	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	167437900	167437900	A	T	SNP	PDCD10	ENST00000392750	human	ensembl	74_37	-1	known	missense	c.46	p.S16T	1.000	pfam_DUF1241	pfam_DUF1241	-	no_errors	PDCD10	HGNC	ENSG00000114209	tier1	-	-	87	0	0.00	45	16	26.23
PDCD11	0	genome.wustl.edu	37	10	105200521	105200521	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	105200521	105200521	G	A	SNP	PDCD11	ENST00000369797	human	ensembl	74_37	+1	known	missense	c.4471	p.G1491S	0.000	NULL	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Suf,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_HAT,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,prints_Ribosomal_S1	-	no_errors	PDCD11	HGNC	ENSG00000148843	tier1	-	-	47	0	0.00	38	13	25.49
PDE3B	0	genome.wustl.edu	37	11	14810530	14810531	+	RNA	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	14810530	14810531	-	T	INS	PDE3B	ENST00000525439	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	PDE3B	HGNC	ENSG00000152270	tier1			37	0	0.00	23	12	34.29
PDE4A	0	genome.wustl.edu	37	19	10578271	10578271	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	10578271	10578271	G	-	DEL	PDE4A	ENST00000352831	human	ensembl	74_37	+1	known	frame_shift_del	c.2635	p.S881fs	0.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE4A	HGNC	ENSG00000065989	tier1			43	0	0.00	41	6	12.77
PDE4DIP	0	genome.wustl.edu	37	1	145075830	145075830	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	145075830	145075830	G	T	SNP	PDE4DIP	ENST00000369348	human	ensembl	74_37	-1	known	silent	c.33	p.R11	0.993	NULL	pfam_Spindle_assoc	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	tier1	-	-	154	0	0.00	107	10	8.55
PDE5A	0	genome.wustl.edu	37	4	120528330	120528330	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	120528330	120528330	C	T	SNP	PDE5A	ENST00000354960	human	ensembl	74_37	-1	known	missense	c.275	p.S92N	0.559	NULL	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE5A	HGNC	ENSG00000138735	tier1	-	-	62	0	0.00	60	6	9.09
PDE9A	0	genome.wustl.edu	37	21	44190872	44190872	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	44190872	44190872	C	T	SNP	PDE9A	ENST00000291539	human	ensembl	74_37	+1	known	silent	c.1650	p.Y550	1.000	NULL	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE9A	HGNC	ENSG00000160191	tier1	-	-	24	0	0.00	13	8	38.10
PDE9A	0	genome.wustl.edu	37	21	44195538	44195539	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	44195538	44195539	AA	-	DEL	PDE9A	ENST00000460989	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	PDE9A	HGNC	ENSG00000160191	tier1			32	0	0.00	15	5	25.00
PDGFB	0	genome.wustl.edu	37	22	39626130	39626130	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	39626130	39626130	C	T	SNP	PDGFB	ENST00000331163	human	ensembl	74_37	-1	known	missense	c.560	p.R187Q	0.101	NULL	pfam_PDGF/VEGF_dom,pfam_PDGF_N,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	-	no_errors	PDGFB	HGNC	ENSG00000100311				80	0	0.00	73	4	5.19
PDIA4	0	genome.wustl.edu	37	7	148702314	148702314	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	148702314	148702314	C	T	SNP	PDIA4	ENST00000286091	human	ensembl	74_37	-1	known	missense	c.1441	p.E481K	1.000	pirsf_Protein_diS-isomerase_A4,superfamily_Thioredoxin-like_fold,tigrfam_Prot_disulphide_isomerase	pirsf_Protein_diS-isomerase_A4,pfam_Thioredoxin_domain,pfam_Calsequestrin,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,prints_Calsequestrin,tigrfam_Prot_disulphide_isomerase,tigrfam_Disulphide_isomerase	-	no_errors	PDIA4	HGNC	ENSG00000155660	tier1	-	-	47	0	0.00	48	7	12.73
PDLIM2	0	genome.wustl.edu	37	8	22442382	22442382	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	22442382	22442382	A	T	SNP	PDLIM2	ENST00000308354	human	ensembl	74_37	+1	known	missense	c.1044	p.E348D	0.846	NULL	pfam_PDZ,pfam_Znf_LIM,superfamily_PDZ,smart_PDZ,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	PDLIM2	HGNC	ENSG00000120913	tier1	-	-	69	0	0.00	57	4	6.56
PDLIM5	0	genome.wustl.edu	37	4	95377669	95377669	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	95377669	95377669	T	-	DEL	PDLIM5	ENST00000359265	human	ensembl	74_37	+1	putative	frame_shift_del	c.371	p.F126fs	0.000	NULL	NULL	-	no_errors	PDLIM5	HGNC	ENSG00000163110	tier1			23	0	0.00	8	10	55.56
PDLIM7	0	genome.wustl.edu	37	5	176918059	176918059	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	176918059	176918059	G	A	SNP	PDLIM7	ENST00000355841	human	ensembl	74_37	-1	known	nonsense	c.487	p.Q163*	1.000	NULL	pfam_Znf_LIM,pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	PDLIM7	HGNC	ENSG00000196923	tier1	-	-	48	0	0.00	44	11	20.00
PDZD2	0	genome.wustl.edu	37	5	31983543	31983543	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	31983543	31983543	C	T	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	silent	c.759	p.G253	0.984	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	tier1	-	-	56	0	0.00	47	13	21.31
PDZRN3	0	genome.wustl.edu	37	3	73673854	73673854	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	73673854	73673854	G	A	SNP	PDZRN3	ENST00000263666	human	ensembl	74_37	-1	known	silent	c.123	p.C41	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_PDZ,pfam_Znf_C3HC4_RING-type,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	PDZRN3	HGNC	ENSG00000121440	tier1	-	-	29	0	0.00	27	5	15.62
PEAK1	0	genome.wustl.edu	37	15	77472838	77472838	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	77472838	77472838	G	A	SNP	PEAK1	ENST00000312493	human	ensembl	74_37	-1	known	silent	c.1431	p.V477	0.003	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	PEAK1	HGNC	ENSG00000173517	tier1	-	-	78	0	0.00	48	12	20.00
PEAK1	0	genome.wustl.edu	37	15	77407253	77407253	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	77407253	77407253	G	A	SNP	PEAK1	ENST00000312493	human	ensembl	74_37	-1	known	silent	c.4486	p.L1496	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	PEAK1	HGNC	ENSG00000173517				42	0	0.00	40	3	6.98
PEAR1	0	genome.wustl.edu	37	1	156879873	156879873	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	156879873	156879873	C	T	SNP	PEAR1	ENST00000292357	human	ensembl	74_37	+1	known	missense	c.1651	p.R551C	0.997	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin	pfam_EGF_laminin,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	PEAR1	HGNC	ENSG00000187800				57	0	0.00	32	2	5.88
PEG3	0	genome.wustl.edu	37	19	57328136	57328136	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	57328136	57328136	G	A	SNP	PEG3	ENST00000326441	human	ensembl	74_37	-1	known	silent	c.1674	p.G558	0.039	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	PEG3	HGNC	ENSG00000198300	tier1	-	-	57	0	0.00	51	10	16.39
PELI1	0	genome.wustl.edu	37	2	64323617	64323617	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	64323617	64323617	T	C	SNP	PELI1	ENST00000358912	human	ensembl	74_37	-1	known	missense	c.431	p.E144G	1.000	pfam_Pellino_fam	pfam_Pellino_fam	-	no_errors	PELI1	HGNC	ENSG00000197329	tier1	-	-	32	0	0.00	28	4	12.50
PELI3	0	genome.wustl.edu	37	11	66239923	66239923	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	66239923	66239923	C	T	SNP	PELI3	ENST00000320740	human	ensembl	74_37	+1	known	silent	c.438	p.S146	0.894	pfam_Pellino_fam	pfam_Pellino_fam	-	no_errors	PELI3	HGNC	ENSG00000174516				37	0	0.00	30	5	14.29
PELO	0	genome.wustl.edu	37	5	52097435	52097435	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	52097435	52097435	G	A	SNP	PELO	ENST00000274311	human	ensembl	74_37	+1	known	missense	c.919	p.A307T	1.000	pfam_eRF1_3,tigrfam_Transl_rel_pelota-like	pfam_eRF1_1_Pelota,pfam_eRF1_2,pfam_eRF1_3,tigrfam_Transl_rel_pelota-like	-	no_errors	PELO	HGNC	ENSG00000152684	tier1	-	-	47	0	0.00	41	11	21.15
PELP1	0	genome.wustl.edu	37	17	4578192	4578192	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	4578192	4578192	G	A	SNP	PELP1	ENST00000301396	human	ensembl	74_37	-1	known	missense	c.1766	p.S589L	0.294	pfam_Uncharacterised_NUC202	pfam_Uncharacterised_NUC202,superfamily_ARM-type_fold	-	no_errors	PELP1	HGNC	ENSG00000141456	tier1	-	-	60	0	0.00	61	6	8.96
PEPD	0	genome.wustl.edu	37	19	33878909	33878909	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	33878909	33878909	C	T	SNP	PEPD	ENST00000244137	human	ensembl	74_37	-1	known	missense	c.1231	p.V411M	0.972	pfam_Pept_M24_structural-domain,superfamily_Pept_M24_structural-domain	pfam_Pept_M24_structural-domain,pfam_Aminopep_P_N,superfamily_Pept_M24_structural-domain	-	no_errors	PEPD	HGNC	ENSG00000124299	tier1	-	-	25	0	0.00	19	8	29.63
PER3	0	genome.wustl.edu	37	1	7887598	7887598	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	7887598	7887598	C	T	SNP	PER3	ENST00000361923	human	ensembl	74_37	+1	known	missense	c.2585	p.S862L	0.000	NULL	pfam_Period_circadian-like_C,pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PER3	HGNC	ENSG00000049246	tier1	-	-	64	0	0.00	49	21	30.00
PES1	0	genome.wustl.edu	37	22	30977620	30977620	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	30977620	30977620	G	A	SNP	PES1	ENST00000354694	human	ensembl	74_37	-1	known	silent	c.642	p.D214	0.980	pfam_Pescadillo	pfam_Pescadillo,pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	PES1	HGNC	ENSG00000100029	tier1	-	-	18	0	0.00	13	5	27.78
PEX5L	0	genome.wustl.edu	37	3	179519743	179519743	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	179519743	179519743	G	A	SNP	PEX5L	ENST00000467460	human	ensembl	74_37	-1	known	missense	c.1754	p.A585V	0.987	NULL	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PEX5L	HGNC	ENSG00000114757	tier1	-	-	44	0	0.00	50	6	10.71
PFKM	0	genome.wustl.edu	37	12	48528050	48528050	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	48528050	48528050	G	A	SNP	PFKM	ENST00000312352	human	ensembl	74_37	+1	known	missense	c.629	p.R210H	1.000	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,prints_Phosphofructokinase,tigrfam_6-phosphofructokinase_euk	pfam_Phosphofructokinase_dom,superfamily_Phosphofructokinase_dom,pirsf_6-phosphofructokinase_euk,prints_Phosphofructokinase,tigrfam_6-phosphofructokinase_euk	-	no_errors	PFKM	HGNC	ENSG00000152556	tier1	-	-	65	0	0.00	51	6	10.53
PFN1	0	genome.wustl.edu	37	17	4849207	4849207	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	4849207	4849207	A	G	SNP	PFN1	ENST00000225655	human	ensembl	74_37	-1	known	silent	c.411	p.R137	0.998	superfamily_Profilin_eukaryotes/bac,smart_Profilin_eukaryotes/bac	pfam_Profilin_eukaryotes/bac,superfamily_Profilin_eukaryotes/bac,smart_Profilin_eukaryotes/bac,prints_Profilin_chordates	-	no_errors	PFN1	HGNC	ENSG00000108518	tier1	-	-	118	0	0.00	91	18	16.51
PGA5	0	genome.wustl.edu	37	11	61015862	61015862	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	61015862	61015862	T	A	SNP	PGA5	ENST00000451616	human	ensembl	74_37	+1	putative	missense	c.166	p.F56I	0.001	NULL	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	-	no_errors	PGA5	HGNC	ENSG00000256713	tier1	-	-	152	0	0.00	111	10	8.26
PGAP1	0	genome.wustl.edu	37	2	197712754	197712754	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	197712754	197712754	G	A	SNP	PGAP1	ENST00000409475	human	ensembl	74_37	-1	known	missense	c.1775	p.A592V	1.000	NULL	pfam_PGAP1-like	-	no_errors	PGAP1	HGNC	ENSG00000197121	tier1	-	-	52	0	0.00	37	6	13.95
PGBD1	0	genome.wustl.edu	37	6	28268581	28268581	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	28268581	28268581	G	A	SNP	PGBD1	ENST00000259883	human	ensembl	74_37	+1	known	missense	c.950	p.R317H	0.012	NULL	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,pfscan_SRCR,pfscan_Tscrpt_reg_SCAN	-	no_errors	PGBD1	HGNC	ENSG00000137338	tier1	rs199718652	-	38	0	0.00	21	10	32.26
PGLYRP2	0	genome.wustl.edu	37	19	15587229	15587229	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	15587229	15587229	G	A	SNP	PGLYRP2	ENST00000292609	human	ensembl	74_37	-1	known	silent	c.252	p.C84	0.000	NULL	pfam_Amidase_domain,superfamily_Amidase_domain,smart_PGRP_domain_met/bac,smart_Amidase_domain	-	no_errors	PGLYRP2	HGNC	ENSG00000161031	tier1	-	-	63	0	0.00	36	7	16.28
PGLYRP3	0	genome.wustl.edu	37	1	153274898	153274898	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	153274898	153274898	C	T	SNP	PGLYRP3	ENST00000290722	human	ensembl	74_37	-1	known	missense	c.715	p.D239N	1.000	pfam_Amidase_domain,superfamily_Amidase_domain,smart_PGRP_domain_met/bac,smart_Amidase_domain	pfam_Amidase_domain,superfamily_Amidase_domain,smart_PGRP_domain_met/bac,smart_Amidase_domain	-	no_errors	PGLYRP3	HGNC	ENSG00000159527	tier1	-	-	76	0	0.00	54	9	14.29
PGLYRP3	0	genome.wustl.edu	37	1	153279708	153279708	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	153279708	153279708	C	-	DEL	PGLYRP3	ENST00000290722	human	ensembl	74_37	-1	known	frame_shift_del	c.91	p.A31fs	0.002	superfamily_Amidase_domain,smart_PGRP_domain_met/bac	pfam_Amidase_domain,superfamily_Amidase_domain,smart_PGRP_domain_met/bac,smart_Amidase_domain	-	no_errors	PGLYRP3	HGNC	ENSG00000159527	tier1			44	0	0.00	34	12	26.09
PGM5	0	genome.wustl.edu	37	9	70993121	70993121	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	70993121	70993121	C	T	SNP	PGM5	ENST00000396396	human	ensembl	74_37	+1	known	nonsense	c.268	p.R90*	0.949	pfam_A-D-PHexomutase_a/b/a-I,superfamily_A-D-PHexomutase_a/b/a-I/II/III	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_a/b/a-II,superfamily_A-D-PHexomutase_a/b/a-I/II/III,prints_Alpha-D-phosphohexomutase_SF	-	no_errors	PGM5	HGNC	ENSG00000154330	tier1	-	-	71	0	0.00	94	11	10.48
PGM5	0	genome.wustl.edu	37	9	70993145	70993145	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	70993145	70993145	A	G	SNP	PGM5	ENST00000396396	human	ensembl	74_37	+1	known	missense	c.292	p.I98V	1.000	pfam_A-D-PHexomutase_a/b/a-I,superfamily_A-D-PHexomutase_a/b/a-I/II/III	pfam_A-D-PHexomutase_a/b/a-I,pfam_A-D-PHexomutase_a/b/a-III,pfam_A-D-PHexomutase_a/b/a-II,superfamily_A-D-PHexomutase_a/b/a-I/II/III,prints_Alpha-D-phosphohexomutase_SF	-	no_errors	PGM5	HGNC	ENSG00000154330	tier1	-	-	93	0	0.00	88	8	8.33
PGRMC2	0	genome.wustl.edu	37	4	129193546	129193547	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	129193546	129193547	CT	-	DEL	PGRMC2	ENST00000520121	human	ensembl	74_37	-1	known	frame_shift_del	c.617_616	p.S206fs	1.000:1.000	pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd	pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd	-	no_errors	PGRMC2	HGNC	ENSG00000164040	tier1			38	0	0.00	21	5	19.23
PHC1	0	genome.wustl.edu	37	12	9089508	9089508	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	9089508	9089508	G	A	SNP	PHC1	ENST00000543824	human	ensembl	74_37	+1	known	missense	c.2425	p.A809T	1.000	pfam_Znf_MYM,pfscan_Znf_FCS	pfam_SAM_type1,pfam_SAM_2,pfam_Znf_MYM,superfamily_SAM/pointed,smart_SAM,pfscan_SAM,pfscan_Znf_FCS	-	no_errors	PHC1	HGNC	ENSG00000111752	tier1	-	-	49	0	0.00	45	4	8.16
PHF1	0	genome.wustl.edu	37	6	33380050	33380050	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	33380050	33380050	C	-	DEL	PHF1	ENST00000374516	human	ensembl	74_37	+1	known	frame_shift_del	c.10	p.R6fs	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF1	HGNC	ENSG00000112511	tier1			47	0	0.00	25	5	16.67
PHF13	0	genome.wustl.edu	37	1	6680069	6680071	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	6680069	6680071	GAA	-	DEL	PHF13	ENST00000377648	human	ensembl	74_37	+1	known	in_frame_del	c.348_350	p.K120in_frame_del	0.998:1.000:1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD	-	no_errors	PHF13	HGNC	ENSG00000116273	tier1			23	0	0.00	23	8	25.81
PHF2	0	genome.wustl.edu	37	9	96422612	96422612	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	96422612	96422612	A	-	DEL	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	frame_shift_del	c.1468	p.K492fs	1.000	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724	tier1			95	0	0.00	66	12	15.38
PHF3	0	genome.wustl.edu	37	6	64394560	64394560	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	64394560	64394560	A	T	SNP	PHF3	ENST00000262043	human	ensembl	74_37	+1	known	missense	c.937	p.I313L	0.000	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	PHF3	HGNC	ENSG00000118482	tier1	-	-	25	0	0.00	32	4	11.11
PHGR1	0	genome.wustl.edu	37	15	40648424	40648424	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	40648424	40648424	C	0	DEL	PHGR1	ENST00000448599	human	ensembl	74_37	+1	known	frame_shift_del	c.169	p.H59fs	0.026	NULL	NULL	-	no_errors	PHGR1	HGNC	ENSG00000233041				17	0	0.00	12	6	33.33
PHLDB1	0	genome.wustl.edu	37	11	118528628	118528628	+	RNA	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	118528628	118528628	C	A	SNP	PHLDB1	ENST00000534140	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	PHLDB1	HGNC	ENSG00000019144	tier1	-	-	49	0	0.00	21	6	22.22
PI16	0	genome.wustl.edu	37	6	36926976	36926976	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	36926976	36926976	G	-	DEL	PI16	ENST00000373674	human	ensembl	74_37	+1	known	frame_shift_del	c.227	p.G77fs	1.000	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	-	no_errors	PI16	HGNC	ENSG00000164530	tier1			90	0	0.00	63	11	14.86
PI4KA	0	genome.wustl.edu	37	22	21161675	21161675	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	21161675	21161675	C	T	SNP	PI4KA	ENST00000255882	human	ensembl	74_37	-1	known	silent	c.1143	p.L381	0.987	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PI4KA	HGNC	ENSG00000241973	tier1	-	-	47	0	0.00	23	7	23.33
PIAS3	0	genome.wustl.edu	37	1	145585419	145585419	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	145585419	145585419	T	C	SNP	PIAS3	ENST00000393045	human	ensembl	74_37	+1	known	missense	c.1684	p.Y562H	1.000	NULL	pfam_Znf_MIZ,smart_SAP_dom,pfscan_Znf_MIZ,pfscan_SAP_dom	-	no_errors	PIAS3	HGNC	ENSG00000131788	tier1	-	-	38	0	0.00	31	5	13.89
PIGP	0	genome.wustl.edu	37	21	38439662	38439662	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	38439662	38439662	T	C	SNP	PIGP	ENST00000464265	human	ensembl	74_37	-1	known	silent	c.246	p.L82	0.996	pfam_PIG-P,pirsf_PIG-P_GPI19	pfam_PIG-P,pirsf_PIG-P_GPI19	-	no_errors	PIGP	HGNC	ENSG00000185808	tier1	-	-	66	0	0.00	55	8	12.70
PIGR	0	genome.wustl.edu	37	1	207112680	207112680	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	207112680	207112680	G	A	SNP	PIGR	ENST00000356495	human	ensembl	74_37	-1	known	nonsense	c.172	p.Q58*	0.203	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PIGR	HGNC	ENSG00000162896	tier1	-	-	41	0	0.00	26	17	39.53
PIGS	0	genome.wustl.edu	37	17	26888605	26888605	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	26888605	26888605	G	A	SNP	PIGS	ENST00000308360	human	ensembl	74_37	-1	known	missense	c.511	p.R171W	0.688	pfam_PtdIno-glycan_biosynth_class_S	pfam_PtdIno-glycan_biosynth_class_S	-	no_errors	PIGS	HGNC	ENSG00000087111				37	0	0.00	32	2	5.88
PIGT	0	genome.wustl.edu	37	20	44050026	44050026	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	44050026	44050026	C	-	DEL	PIGT	ENST00000279036	human	ensembl	74_37	+1	known	frame_shift_del	c.1037	p.P348fs	0.666	pfam_PIG-T	pfam_PIG-T	-	no_errors	PIGT	HGNC	ENSG00000124155	tier1			55	0	0.00	29	5	14.71
PIK3C2B	0	genome.wustl.edu	37	1	204438071	204438072	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	204438071	204438072	-	G	INS	PIK3C2B	ENST00000367187	human	ensembl	74_37	-1	known	frame_shift_ins	c.860_859	p.R287fs	1.000:0.985	NULL	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,pfam_Phox,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,superfamily_Phox,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,smart_Phox,smart_C2_dom,pfscan_C2_dom,pfscan_Phox,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C2B	HGNC	ENSG00000133056	tier1			57	0	0.00	29	14	32.56
PIK3CD	0	genome.wustl.edu	37	1	9780259	9780259	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	9780259	9780259	G	A	SNP	PIK3CD	ENST00000536656	human	ensembl	74_37	+1	known	missense	c.1324	p.E442K	0.998	superfamily_C2_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CD	HGNC	ENSG00000171608	tier1	-	-	93	0	0.00	56	10	15.15
PIK3R2	0	genome.wustl.edu	37	19	18271903	18271903	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	18271903	18271903	C	T	SNP	PIK3R2	ENST00000222254	human	ensembl	74_37	+1	known	missense	c.506	p.A169V	0.018	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_SH2,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_SH3_domain,smart_RhoGAP_dom,smart_SH2,pfscan_SH2,pfscan_SH3_domain,pfscan_RhoGAP_dom,prints_PI3kinase_P85,prints_SH2	-	no_errors	PIK3R2	HGNC	ENSG00000105647	tier1	-	-	53	0	0.00	43	12	21.82
PIK3R3	0	genome.wustl.edu	37	1	46509106	46509106	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	46509106	46509106	A	-	DEL	PIK3R3	ENST00000488808	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PIK3R3	HGNC	ENSG00000117461	tier1			36	0	0.00	30	4	11.76
PITRM1	0	genome.wustl.edu	37	10	3181192	3181192	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	3181192	3181192	A	G	SNP	PITRM1	ENST00000380989	human	ensembl	74_37	-1	known	missense	c.2824	p.W942R	1.000	pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	pfam_Peptidase_M16C_assoc,pfam_Peptidase_M16_C,pfam_Pept_M16_N,superfamily_Metalloenz_LuxS/M16	-	no_errors	PITRM1	HGNC	ENSG00000107959				61	0	0.00	48	4	7.69
PITX2	0	genome.wustl.edu	37	4	111543527	111543527	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	111543527	111543527	G	T	SNP	PITX2	ENST00000306732	human	ensembl	74_37	-1	known	silent	c.90	p.P30	1.000	pirsf_Homeobox_Pitx/unc30	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Pitx/unc30,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	PITX2	HGNC	ENSG00000164093	tier1	-	-	130	0	0.00	88	8	8.33
PKD1	0	genome.wustl.edu	37	16	2148119	2148119	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	2148119	2148119	G	T	SNP	PKD1	ENST00000566784	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	PKD1	HGNC	ENSG00000008710	tier1	-	-	66	0	0.00	39	13	25.00
PKD1	0	genome.wustl.edu	37	16	2139829	2139829	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	2139829	2139829	G	A	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	missense	c.12811	p.P4271S	0.083	NULL	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710				35	0	0.00	25	3	10.71
PKD1L1	0	genome.wustl.edu	37	7	47955186	47955186	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	47955186	47955186	A	-	DEL	PKD1L1	ENST00000289672	human	ensembl	74_37	-1	known	frame_shift_del	c.1071	p.H358fs	0.006	NULL	pfam_PKD/REJ-like,pfam_PKD1_2_channel,pfam_PKD_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,superfamily_PKD_dom,smart_PKD/Chitinase_dom,smart_PLAT/LH2_dom,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like	-	no_errors	PKD1L1	HGNC	ENSG00000158683	tier1			38	0	0.00	14	9	39.13
PKDCC	0	genome.wustl.edu	37	2	42280450	42280450	+	Silent	SNP	C	C	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	42280450	42280450	C	G	SNP	PKDCC	ENST00000294964	human	ensembl	74_37	+1	known	silent	c.711	p.A237	0.994	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,pfscan_Prot_kinase_dom	-	no_errors	PKDCC	HGNC	ENSG00000162878	tier1	-	-	51	0	0.00	47	9	16.07
PKDREJ	0	genome.wustl.edu	37	22	46658462	46658462	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	46658462	46658462	C	T	SNP	PKDREJ	ENST00000253255	human	ensembl	74_37	-1	known	missense	c.758	p.R253H	0.000	pfam_PKD/REJ-like,pfscan_REJ-like	pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_Ion_trans_dom,superfamily_Lipase_LipOase,smart_GPS_dom,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,prints_PKD_2	-	no_errors	PKDREJ	HGNC	ENSG00000130943	tier1	-	-	38	0	0.00	29	8	21.62
PKNOX1	0	genome.wustl.edu	37	21	44433177	44433177	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	44433177	44433177	G	T	SNP	PKNOX1	ENST00000291547	human	ensembl	74_37	+1	known	splice_site	c.352-1	e4-1	1.000	-	-	-	no_errors	PKNOX1	HGNC	ENSG00000160199				61	0	0.00	62	4	6.06
PKNOX2	0	genome.wustl.edu	37	11	125301354	125301354	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	125301354	125301354	G	-	DEL	PKNOX2	ENST00000530517	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.181	-	-	-	no_errors	PKNOX2	HGNC	ENSG00000165495	tier1			16	0	0.00	11	6	35.29
PLA2G16	0	genome.wustl.edu	37	11	63381549	63381549	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	63381549	63381549	G	-	DEL	PLA2G16	ENST00000394613	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PLA2G16	HGNC	ENSG00000176485	tier1			87	0	0.00	47	15	24.19
PLA2G4F	0	genome.wustl.edu	37	15	42437801	42437801	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	42437801	42437801	C	T	SNP	PLA2G4F	ENST00000397272	human	ensembl	74_37	-1	known	silent	c.1758	p.E586	0.106	superfamily_Acyl_Trfase/lysoPLipase,smart_LysoPLipase_cat_dom,pfscan_LysoPLipase_cat_dom	pfam_LysoPLipase_cat_dom,pfam_C2_dom,superfamily_Acyl_Trfase/lysoPLipase,superfamily_C2_dom,smart_C2_dom,smart_LysoPLipase_cat_dom,pfscan_C2_dom,pfscan_LysoPLipase_cat_dom	-	no_errors	PLA2G4F	HGNC	ENSG00000168907	tier1	-	-	96	0	0.00	54	15	21.74
PLA2R1	0	genome.wustl.edu	37	2	160885468	160885468	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	160885468	160885468	A	G	SNP	PLA2R1	ENST00000283243	human	ensembl	74_37	-1	known	missense	c.848	p.M283T	0.018	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin	-	no_errors	PLA2R1	HGNC	ENSG00000153246	tier1	-	-	38	0	0.00	20	10	33.33
PLAGL2	0	genome.wustl.edu	37	20	30784466	30784466	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	30784466	30784466	G	A	SNP	PLAGL2	ENST00000246229	human	ensembl	74_37	-1	known	missense	c.1280	p.P427L	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PLAGL2	HGNC	ENSG00000126003	tier1	-	-	72	0	0.00	58	8	12.12
PLB1	0	genome.wustl.edu	37	2	28827531	28827531	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	28827531	28827531	C	T	SNP	PLB1	ENST00000422425	human	ensembl	74_37	+1	known	missense	c.2833	p.R945C	0.945	pfam_Lipase_GDSL	pfam_Lipase_GDSL	-	no_errors	PLB1	HGNC	ENSG00000163803	tier1	rs145179606	-	50	0	0.00	30	6	16.67
PLCB2	0	genome.wustl.edu	37	15	40596215	40596215	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	40596215	40596215	G	A	SNP	PLCB2	ENST00000260402	human	ensembl	74_37	-1	known	missense	c.149	p.T50M	0.993	pirsf_PLC-beta	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLC-beta_C,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB2	HGNC	ENSG00000137841	tier1	-	-	36	0	0.00	38	7	15.56
PLD4	0	genome.wustl.edu	37	14	105398428	105398428	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	105398428	105398428	G	A	SNP	PLD4	ENST00000392593	human	ensembl	74_37	+1	known	missense	c.1138	p.G380R	0.999	NULL	pfam_PLipase_D/transphosphatidylase,smart_PLipase_D/transphosphatidylase,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD4	HGNC	ENSG00000166428	tier1	-	-	59	0	0.00	34	16	32.00
PLEC	0	genome.wustl.edu	37	8	144994758	144994758	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	144994758	144994758	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	silent	c.9642	p.T3214	0.004	pfam_Plectin_repeat,smart_Plectin_repeat	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209	tier1	-	-	59	0	0.00	60	25	29.41
PLEKHA2	0	genome.wustl.edu	37	8	38809686	38809686	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	38809686	38809686	C	T	SNP	PLEKHA2	ENST00000420274	human	ensembl	74_37	+1	known	silent	c.489	p.N163	0.942	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA2	HGNC	ENSG00000169499	tier1	-	-	34	0	0.00	32	6	15.79
PLEKHA3	0	genome.wustl.edu	37	2	179350399	179350399	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	179350399	179350399	T	C	SNP	PLEKHA3	ENST00000234453	human	ensembl	74_37	+1	known	silent	c.72	p.N24	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA3	HGNC	ENSG00000116095	tier1	-	-	26	0	0.00	13	3	18.75
PLEKHA4	0	genome.wustl.edu	37	19	49344468	49344468	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	49344468	49344468	G	A	SNP	PLEKHA4	ENST00000263265	human	ensembl	74_37	-1	known	missense	c.1843	p.R615W	0.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA4	HGNC	ENSG00000105559	tier1	-	-	143	0	0.00	99	32	24.43
PLEKHA4	0	genome.wustl.edu	37	19	49344558	49344558	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	49344558	49344558	C	T	SNP	PLEKHA4	ENST00000263265	human	ensembl	74_37	-1	known	missense	c.1753	p.A585T	0.160	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA4	HGNC	ENSG00000105559	tier1	-	-	85	0	0.00	60	15	20.00
PLEKHA6	0	genome.wustl.edu	37	1	204228411	204228411	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	204228411	204228411	C	-	DEL	PLEKHA6	ENST00000272203	human	ensembl	74_37	-1	known	frame_shift_del	c.982	p.V328fs	0.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA6	HGNC	ENSG00000143850	tier1			50	0	0.00	38	18	32.14
PLEKHH3	0	genome.wustl.edu	37	17	40823464	40823464	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	40823464	40823464	C	T	SNP	PLEKHH3	ENST00000591022	human	ensembl	74_37	-1	known	missense	c.1189	p.A397T	0.655	pfam_MyTH4_dom,smart_MyTH4_dom,pfscan_MyTH4_dom	pfam_MyTH4_dom,pfam_FERM_central,pfam_Ras-assoc,superfamily_FERM_central,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEKHH3	HGNC	ENSG00000068137	tier1	-	-	90	0	0.00	57	12	17.39
PLEKHM3	0	genome.wustl.edu	37	2	208841894	208841894	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	208841894	208841894	T	C	SNP	PLEKHM3	ENST00000427836	human	ensembl	74_37	-1	known	missense	c.1027	p.T343A	0.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHM3	HGNC	ENSG00000178385				34	0	0.00	21	2	8.70
PLG	0	genome.wustl.edu	37	6	161132169	161132170	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	161132169	161132170	-	A	INS	PLG	ENST00000308192	human	ensembl	74_37	+1	known	frame_shift_ins	c.353_354	p.N120fs	0.028:0.033	pirsf_Pept_S1A_plasmin,pfam_Kringle,superfamily_Kringle-like,smart_Kringle,pfscan_Kringle	pirsf_Pept_S1A_plasmin,pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	PLG	HGNC	ENSG00000122194	tier1			259	0	0.00	240	30	11.11
PLG	0	genome.wustl.edu	37	6	161134306	161134306	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	161134306	161134306	T	-	DEL	PLG	ENST00000462918	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	PLG	HGNC	ENSG00000122194	tier1			22	0	0.00	25	4	13.79
PLIN2	0	genome.wustl.edu	37	9	19108507	19108508	+	RNA	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	19108507	19108508	-	A	INS	PLIN2	ENST00000464326	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002:0.029	-	-	-	no_errors	PLIN2	HGNC	ENSG00000147872	tier1			10	0	0.00	11	4	26.67
PLIN4	0	genome.wustl.edu	37	19	4516633	4516633	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	4516633	4516633	T	C	SNP	PLIN4	ENST00000301286	human	ensembl	74_37	-1	novel	missense	c.209	p.E70G	0.020	pfam_Perilipin	pfam_Perilipin,superfamily_Ankyrin_rpt-contain_dom	-	no_errors	PLIN4	HGNC	ENSG00000167676	tier1	-	-	84	0	0.00	47	17	26.56
PLK1	0	genome.wustl.edu	37	16	23695251	23695251	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	23695251	23695251	C	T	SNP	PLK1	ENST00000300093	human	ensembl	74_37	+1	known	missense	c.877	p.R293C	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_POLO_box_duplicated_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_POLO_box_duplicated_dom,pfscan_Prot_kinase_dom	-	no_errors	PLK1	HGNC	ENSG00000166851	tier1	-	-	61	0	0.00	60	15	20.00
PLXDC2	0	genome.wustl.edu	37	10	20569079	20569079	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	20569079	20569079	A	-	DEL	PLXDC2	ENST00000377238	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PLXDC2	HGNC	ENSG00000120594	tier1			38	0	0.00	22	10	31.25
PLXNA1	0	genome.wustl.edu	37	3	126708216	126708216	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	126708216	126708216	G	A	SNP	PLXNA1	ENST00000393409	human	ensembl	74_37	+1	known	silent	c.780	p.T260	0.030	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA1	HGNC	ENSG00000114554	tier1	-	-	29	0	0.00	19	15	44.12
PLXNA1	0	genome.wustl.edu	37	3	126748821	126748821	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	126748821	126748821	A	G	SNP	PLXNA1	ENST00000393409	human	ensembl	74_37	+1	known	missense	c.4975	p.N1659D	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA1	HGNC	ENSG00000114554				47	0	0.00	20	2	9.09
PLXNA4	0	genome.wustl.edu	37	7	131912284	131912284	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	131912284	131912284	C	A	SNP	PLXNA4	ENST00000321063	human	ensembl	74_37	-1	known	missense	c.1808	p.G603V	1.000	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA4	HGNC	ENSG00000221866	tier1	-	-	49	0	0.00	23	17	42.50
PLXNB3	0	genome.wustl.edu	37	X	153043747	153043747	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	153043747	153043747	G	A	SNP	PLXNB3	ENST00000538966	human	ensembl	74_37	+1	known	missense	c.5510	p.R1837Q	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Plexin_repeat,pfam_Semap_dom,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB3	HGNC	ENSG00000198753	tier1	-	-	80	0	0.00	51	8	13.56
PMEPA1	0	genome.wustl.edu	37	20	56227348	56227349	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	56227348	56227349	-	G	INS	PMEPA1	ENST00000341744	human	ensembl	74_37	-1	known	frame_shift_ins	c.625_624	p.S208fs	1.000:0.979	NULL	NULL	-	no_errors	PMEPA1	HGNC	ENSG00000124225	tier1			51	0	0.00	49	6	10.91
PMF1-BGLAP	0	genome.wustl.edu	37	1	156182947	156182948	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	156182947	156182948	-	A	INS	PMF1-BGLAP	ENST00000368276	human	ensembl	74_37	+1	known	frame_shift_ins	c.141_142	p.L48fs	1.000:1.000	NULL	pfam_Nnf1	-	no_errors	PMF1-BGLAP	HGNC	ENSG00000260238	tier1			21	0	0.00	7	3	30.00
PML	0	genome.wustl.edu	37	15	74327656	74327656	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	74327656	74327656	C	-	DEL	PML	ENST00000268059	human	ensembl	74_37	+1	known	frame_shift_del	c.1854	p.P620fs	0.000	NULL	pfam_DUF3583,pfam_Znf_B-box,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	PML	HGNC	ENSG00000140464	tier1			155	0	0.00	121	14	10.37
PNISR	0	genome.wustl.edu	37	6	99848584	99848584	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	99848584	99848584	T	-	DEL	PNISR	ENST00000369239	human	ensembl	74_37	-1	known	frame_shift_del	c.2250	p.K750fs	1.000	NULL	NULL	-	no_errors	PNISR	HGNC	ENSG00000132424	tier1			71	0	0.00	41	10	19.61
PNLIPRP1	0	genome.wustl.edu	37	10	118368594	118368594	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	118368594	118368594	G	T	SNP	PNLIPRP1	ENST00000358834	human	ensembl	74_37	+1	known	missense	c.1370	p.R457L	0.980	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pirsf_Lipoprotein_lipase_LIPH,pfscan_PLAT/LH2_dom,prints_Lipase_panc	pfam_Lipase_N,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pirsf_Lipoprotein_lipase_LIPH,pfscan_PLAT/LH2_dom,prints_Lipase_panc,prints_Lipase	-	no_errors	PNLIPRP1	HGNC	ENSG00000187021	tier1	-	-	37	0	0.00	45	5	10.00
PNMA2	0	genome.wustl.edu	37	8	26365709	26365709	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	26365709	26365709	G	A	SNP	PNMA2	ENST00000522362	human	ensembl	74_37	-1	known	missense	c.563	p.A188V	1.000	NULL	pfam_Retrotrans_gag_dom	-	no_errors	PNMA2	HGNC	ENSG00000240694	tier1	-	-	34	0	0.00	42	11	20.75
PNMAL1	0	genome.wustl.edu	37	19	46973894	46973894	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	46973894	46973894	G	-	DEL	PNMAL1	ENST00000313683	human	ensembl	74_37	-1	known	frame_shift_del	c.399	p.T134fs	0.000	NULL	NULL	-	no_errors	PNMAL1	HGNC	ENSG00000182013	tier1			39	0	0.00	35	8	18.60
PNPLA1	0	genome.wustl.edu	37	6	36260882	36260882	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	36260882	36260882	C	-	DEL	PNPLA1	ENST00000457797	human	ensembl	74_37	+1	known	frame_shift_del	c.486	p.P164fs	0.985	superfamily_Acyl_Trfase/lysoPLipase	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	-	no_errors	PNPLA1	HGNC	ENSG00000180316	tier1			80	0	0.00	64	7	9.86
POLA1	0	genome.wustl.edu	37	X	24735597	24735597	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	24735597	24735597	C	A	SNP	POLA1	ENST00000379068	human	ensembl	74_37	+1	known	silent	c.897	p.T299	0.000	tigrfam_DNA-dir_DNA_pol_B_pol2	pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_Znf_DNA-dir_DNA_pol_B_alpha,pfam_DNA_pol_a_cat_su_N,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B,prints_DNA-dir_DNA_pol_B,tigrfam_DNA-dir_DNA_pol_B_pol2	-	no_errors	POLA1	HGNC	ENSG00000101868	tier1	-	-	38	0	0.00	17	7	28.00
POLE	0	genome.wustl.edu	37	12	133219301	133219301	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	133219301	133219301	C	-	DEL	POLE	ENST00000320574	human	ensembl	74_37	-1	known	frame_shift_del	c.4743	p.T1583fs	0.930	pfam_DNA_pol_e_suA_C	pfam_DNA_pol_e_suA_C,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	-	no_errors	POLE	HGNC	ENSG00000177084	tier1			26	0	0.00	20	3	13.04
POLE	0	genome.wustl.edu	37	12	133241907	133241907	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	133241907	133241907	C	A	SNP	POLE	ENST00000320574	human	ensembl	74_37	-1	known	missense	c.2449	p.G817C	1.000	pfam_DNA-dir_DNA_pol_B_multi_dom,smart_DNA-dir_DNA_pol_B	pfam_DNA_pol_e_suA_C,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	-	no_errors	POLE	HGNC	ENSG00000177084	tier1	-	-	44	0	0.00	36	11	23.40
POLG	0	genome.wustl.edu	37	15	89876828	89876830	+	In_Frame_Del	DEL	TGC	TGC	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TGC	TGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	89876828	89876830	TGC	-	DEL	POLG	ENST00000268124	human	ensembl	74_37	-1	known	in_frame_del	c.158_156	p.Q55in_frame_del	0.005:0.011:0.014	pirsf_DNA-dir_DNA_pol_A_mt_sub	pirsf_DNA-dir_DNA_pol_A_mt_sub,pfam_DNA-dir_DNA_pol_A_palm_dom,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_A_palm_dom,prints_DNA-dir_DNA_pol_A_mt	-	no_errors	POLG	HGNC	ENSG00000140521	tier1			40	0	0.00	24	3	11.11
POLR2B	0	genome.wustl.edu	37	4	57877007	57877007	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	57877007	57877007	T	C	SNP	POLR2B	ENST00000314595	human	ensembl	74_37	+1	known	missense	c.1642	p.W548R	1.000	NULL	pfam_DNA-dir_RNA_pol_su2_6,pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_2,pfam_RNA_pol_Rpb2_7,pfam_RNA_pol_Rpb2_4,pfam_RNA_pol_Rpb2_3,pfam_RNA_pol_Rpb2_5	-	no_errors	POLR2B	HGNC	ENSG00000047315	tier1	-	-	37	0	0.00	37	11	22.92
POLR3A	0	genome.wustl.edu	37	10	79761979	79761979	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	79761979	79761979	T	C	SNP	POLR3A	ENST00000372371	human	ensembl	74_37	-1	known	missense	c.2335	p.T779A	1.000	pfam_RNA_pol_Rpb1_4	pfam_RNA_pol_Rpb1_1,pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,smart_RNA_pol_N	-	no_errors	POLR3A	HGNC	ENSG00000148606	tier1	-	-	23	0	0.00	31	8	20.51
POLR3A	0	genome.wustl.edu	37	10	79782027	79782027	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	79782027	79782027	C	T	SNP	POLR3A	ENST00000372371	human	ensembl	74_37	-1	known	missense	c.761	p.R254Q	1.000	pfam_RNA_pol_Rpb1_1,smart_RNA_pol_N	pfam_RNA_pol_Rpb1_1,pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,smart_RNA_pol_N	-	no_errors	POLR3A	HGNC	ENSG00000148606	tier1	-	-	41	0	0.00	26	7	21.21
POLR3A	0	genome.wustl.edu	37	10	79785947	79785947	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	79785947	79785947	G	A	SNP	POLR3A	ENST00000372371	human	ensembl	74_37	-1	known	missense	c.85	p.R29C	1.000	pfam_RNA_pol_Rpb1_1	pfam_RNA_pol_Rpb1_1,pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,smart_RNA_pol_N	-	no_errors	POLR3A	HGNC	ENSG00000148606	tier1	-	-	60	0	0.00	34	6	15.00
POLR3D	0	genome.wustl.edu	37	8	22105405	22105405	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	22105405	22105405	G	A	SNP	POLR3D	ENST00000397802	human	ensembl	74_37	+1	known	missense	c.245	p.R82H	0.998	NULL	pfam_RPC4	-	no_errors	POLR3D	HGNC	ENSG00000168495	tier1	-	-	41	0	0.00	41	7	14.58
POLRMT	0	genome.wustl.edu	37	19	621241	621241	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	621241	621241	G	A	SNP	POLRMT	ENST00000588649	human	ensembl	74_37	-1	known	silent	c.2457	p.D819	1.000	NULL	pfam_DNA-dir_Rpol_phage-type	-	no_errors	POLRMT	HGNC	ENSG00000099821	tier1	-	-	68	0	0.00	57	6	9.52
POM121	0	genome.wustl.edu	37	7	72418968	72418968	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	72418968	72418968	C	T	SNP	POM121	ENST00000395270	human	ensembl	74_37	+1	known	missense	c.2959	p.R987W	0.000	NULL	NULL	-	no_errors	POM121	HGNC	ENSG00000196313	tier1	rs143664457	-	124	0	0.00	77	17	18.09
POM121L9P	0	genome.wustl.edu	37	22	24659492	24659492	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	24659492	24659492	G	T	SNP	POM121L9P	ENST00000414583	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	POM121L9P	HGNC	ENSG00000128262	tier1	-	-	107	0	0.00	89	36	28.80
POSTN	0	genome.wustl.edu	37	13	38154786	38154786	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	38154786	38154786	T	C	SNP	POSTN	ENST00000379747	human	ensembl	74_37	-1	known	missense	c.1441	p.R481G	1.000	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_FAS1_domain	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_EMI_domain,pfscan_FAS1_domain	-	no_errors	POSTN	HGNC	ENSG00000133110	tier1	-	-	111	0	0.00	82	32	28.07
POSTN	0	genome.wustl.edu	37	13	38156600	38156600	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	38156600	38156600	T	G	SNP	POSTN	ENST00000379747	human	ensembl	74_37	-1	known	missense	c.1295	p.H432P	1.000	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_FAS1_domain	pfam_FAS1_domain,superfamily_FAS1_domain,smart_FAS1_domain,pirsf_TGFb-ind_bIGH3/osteoblast_fac2,pfscan_EMI_domain,pfscan_FAS1_domain	-	no_errors	POSTN	HGNC	ENSG00000133110	tier1	-	-	108	0	0.00	43	27	38.57
POU3F3	0	genome.wustl.edu	37	2	105472906	105472906	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	105472906	105472906	A	G	SNP	POU3F3	ENST00000361360	human	ensembl	74_37	+1	known	missense	c.938	p.D313G	1.000	pirsf_Transcription_factor_POU	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pirsf_Transcription_factor_POU,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F3	HGNC	ENSG00000198914	tier1	-	-	63	0	0.00	40	5	11.11
POU4F3	0	genome.wustl.edu	37	5	145719506	145719506	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	145719506	145719506	C	T	SNP	POU4F3	ENST00000230732	human	ensembl	74_37	+1	known	silent	c.516	p.A172	1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F3	HGNC	ENSG00000091010	tier1	-	-	44	0	0.00	29	5	14.71
POU5F1	0	genome.wustl.edu	37	6	31132949	31132949	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	31132949	31132949	G	A	SNP	POU5F1	ENST00000259915	human	ensembl	74_37	-1	known	nonsense	c.772	p.Q258*	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU5F1	HGNC	ENSG00000204531	tier1	-	-	60	0	0.00	41	11	21.15
PPAN-P2RY11	0	genome.wustl.edu	37	19	10217080	10217080	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	10217080	10217080	T	A	SNP	PPAN-P2RY11	ENST00000393796	human	ensembl	74_37	+1	known	missense	c.10	p.S4T	0.147	NULL	pfam_Brix,pfam_GPCR_Rhodpsn,superfamily_Anticodon-bd,smart_Brix,prints_GPCR_Rhodpsn,pfscan_Brix,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	PPAN-P2RY11	HGNC	ENSG00000243207	tier1	-	-	22	0	0.00	17	4	19.05
PPAN-P2RY11	0	genome.wustl.edu	37	19	10224313	10224313	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	10224313	10224313	C	T	SNP	PPAN-P2RY11	ENST00000428358	human	ensembl	74_37	+1	novel	missense	c.1346	p.P449L	0.016	NULL	pfam_Brix,superfamily_Anticodon-bd,smart_Brix,pfscan_Brix	-	no_errors	PPAN-P2RY11	HGNC	ENSG00000243207	tier1	-	-	76	0	0.00	57	4	6.45
PPAPDC3	0	genome.wustl.edu	37	9	134183419	134183419	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	134183419	134183419	C	T	SNP	PPAPDC3	ENST00000372264	human	ensembl	74_37	+1	known	silent	c.561	p.Y187	1.000	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAPDC3	HGNC	ENSG00000160539	tier1	rs139765954	-	56	0	0.00	52	8	13.33
PPARGC1A	0	genome.wustl.edu	37	4	23797449	23797449	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	23797449	23797449	C	T	SNP	PPARGC1A	ENST00000264867	human	ensembl	74_37	-1	known	missense	c.2393	p.R798K	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	PPARGC1A	HGNC	ENSG00000109819	tier1	-	-	36	0	0.00	30	10	25.00
PPIG	0	genome.wustl.edu	37	2	170465183	170465183	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	170465183	170465183	G	A	SNP	PPIG	ENST00000260970	human	ensembl	74_37	+1	known	missense	c.292	p.E98K	1.000	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom	pfam_Cyclophilin-like_PPIase_dom,superfamily_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,prints_Cyclophilin-like_PPIase_dom	-	no_errors	PPIG	HGNC	ENSG00000138398	tier1	-	-	52	0	0.00	37	4	9.76
PPM1D	0	genome.wustl.edu	37	17	58740624	58740624	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	58740624	58740624	A	-	DEL	PPM1D	ENST00000305921	human	ensembl	74_37	+1	known	frame_shift_del	c.1529	p.N512fs	0.997	NULL	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1D	HGNC	ENSG00000170836	tier1			37	0	0.00	38	2	5.00
PPM1H	0	genome.wustl.edu	37	12	63195670	63195670	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	63195670	63195670	G	A	SNP	PPM1H	ENST00000228705	human	ensembl	74_37	-1	known	missense	c.682	p.R228C	1.000	superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	PPM1H	HGNC	ENSG00000111110	tier1	-	-	41	0	0.00	23	12	34.29
PPOX	0	genome.wustl.edu	37	1	161137885	161137886	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	161137885	161137886	CA	-	DEL	PPOX	ENST00000352210	human	ensembl	74_37	+1	known	frame_shift_del	c.439_440	p.H147fs	1.000:1.000	pfam_Amino_oxidase,tigrfam_Protoporphyrinogen_oxidase	pfam_Amino_oxidase,tigrfam_Protoporphyrinogen_oxidase	-	no_errors	PPOX	HGNC	ENSG00000143224	tier1			52	0	0.00	34	6	15.00
PPP1CC	0	genome.wustl.edu	37	12	111180637	111180637	+	RNA	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	111180637	111180637	C	-	DEL	PPP1CC	ENST00000551690	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	PPP1CC	HGNC	ENSG00000186298	tier1			22	0	0.00	13	3	18.75
PPP1R12B	0	genome.wustl.edu	37	1	202549938	202549938	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	202549938	202549938	C	T	SNP	PPP1R12B	ENST00000290419	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	PPP1R12B	HGNC	ENSG00000077157	tier1	-	-	50	0	0.00	49	4	7.55
PPP1R13L	0	genome.wustl.edu	37	19	45899677	45899677	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	45899677	45899677	G	T	SNP	PPP1R13L	ENST00000360957	human	ensembl	74_37	-1	known	silent	c.730	p.R244	1.000	NULL	pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PPP1R13L	HGNC	ENSG00000104881	tier1	-	-	82	0	0.00	59	12	16.67
PPP1R14B	0	genome.wustl.edu	37	11	64014017	64014017	+	Silent	SNP	C	C	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	64014017	64014017	C	G	SNP	PPP1R14B	ENST00000309318	human	ensembl	74_37	-1	known	silent	c.129	p.G43	0.000	superfamily_PP1_inhibitor	pfam_PP1_inhibitor,superfamily_PP1_inhibitor	-	no_errors	PPP1R14B	HGNC	ENSG00000173457				49	0	0.00	32	4	11.11
PPP1R26	0	genome.wustl.edu	37	9	138379043	138379043	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	138379043	138379043	G	-	DEL	PPP1R26	ENST00000356818	human	ensembl	74_37	+1	known	frame_shift_del	c.2687	p.V898fs	0.002	NULL	NULL	-	no_errors	PPP1R26	HGNC	ENSG00000196422	tier1			67	0	0.00	34	17	33.33
PPP1R37	0	genome.wustl.edu	37	19	45648386	45648386	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	45648386	45648386	C	T	SNP	PPP1R37	ENST00000221462	human	ensembl	74_37	+1	known	silent	c.1164	p.S388	1.000	smart_Leu-rich_rpt_RNase_inh_sub-typ	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	PPP1R37	HGNC	ENSG00000104866	tier1	-	-	37	0	0.00	37	8	17.78
PPP1R9A	0	genome.wustl.edu	37	7	94791228	94791228	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	94791228	94791228	G	A	SNP	PPP1R9A	ENST00000289495	human	ensembl	74_37	+1	known	missense	c.1699	p.G567S	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_SAM_2,pfam_SAM_type1,pfam_PDZ,superfamily_PDZ,superfamily_SAM/pointed,superfamily_Smac_DIABLO-like,smart_PDZ,smart_SAM,pfscan_PDZ,pfscan_SAM	-	no_errors	PPP1R9A	HGNC	ENSG00000158528	tier1	-	-	55	0	0.00	54	7	11.48
PPP2R1B	0	genome.wustl.edu	37	11	111626165	111626165	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	111626165	111626165	G	A	SNP	PPP2R1B	ENST00000311129	human	ensembl	74_37	-1	known	missense	c.697	p.R233C	1.000	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP2R1B	HGNC	ENSG00000137713				31	0	0.00	29	2	6.45
PPP2R5B	0	genome.wustl.edu	37	11	64697795	64697795	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	64697795	64697795	T	C	SNP	PPP2R5B	ENST00000164133	human	ensembl	74_37	+1	known	missense	c.724	p.F242L	1.000	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5B	HGNC	ENSG00000068971	tier1	-	-	44	0	0.00	35	8	18.60
PPP4C	0	genome.wustl.edu	37	16	30087711	30087711	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	30087711	30087711	A	G	SNP	PPP4C	ENST00000279387	human	ensembl	74_37	+1	known	missense	c.13	p.S5G	1.000	NULL	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP4C	HGNC	ENSG00000149923				44	0	0.00	69	4	5.41
PPP4R1	0	genome.wustl.edu	37	18	9547802	9547802	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	9547802	9547802	C	T	SNP	PPP4R1	ENST00000400556	human	ensembl	74_37	-1	known	silent	c.2838	p.A946	0.272	NULL	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP4R1	HGNC	ENSG00000154845	tier1	-	-	18	0	0.00	17	6	26.09
PPP4R1	0	genome.wustl.edu	37	18	9549281	9549281	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	9549281	9549281	G	A	SNP	PPP4R1	ENST00000400556	human	ensembl	74_37	-1	known	missense	c.2603	p.P868L	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP4R1	HGNC	ENSG00000154845	tier1	-	-	55	0	0.00	47	4	7.84
PRB1	0	genome.wustl.edu	37	12	11506732	11506732	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	11506732	11506732	G	T	SNP	PRB1	ENST00000500254	human	ensembl	74_37	-1	known	missense	c.305	p.P102Q	0.003	NULL	NULL	-	no_errors	PRB1	HGNC	ENSG00000251655	tier1	-	-	173	0	0.00	123	16	11.51
PRB2	0	genome.wustl.edu	37	12	11546379	11546379	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	11546379	11546379	T	C	SNP	PRB2	ENST00000389362	human	ensembl	74_37	-1	known	silent	c.633	p.K211	0.102	NULL	NULL	-	no_errors	PRB2	HGNC	ENSG00000121335	tier1	-	-	86	0	0.00	92	7	6.86
PRB2	0	genome.wustl.edu	37	12	11546381	11546381	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	11546381	11546381	T	G	SNP	PRB2	ENST00000389362	human	ensembl	74_37	-1	known	missense	c.631	p.K211Q	0.033	NULL	NULL	-	no_errors	PRB2	HGNC	ENSG00000121335	tier1	rs201455726	-	85	0	0.00	95	8	7.77
PRCD	0	genome.wustl.edu	37	17	74540516	74540517	+	RNA	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	74540516	74540517	-	C	INS	PRCD	ENST00000397633	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	PRCD	HGNC	ENSG00000214140	tier1			33	0	0.00	23	6	20.69
PRDM10	0	genome.wustl.edu	37	11	129827675	129827675	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	129827675	129827675	G	A	SNP	PRDM10	ENST00000358825	human	ensembl	74_37	-1	known	missense	c.200	p.T67M	0.999	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PRDM10	HGNC	ENSG00000170325	tier1	-	-	38	0	0.00	24	10	29.41
PRDM13	0	genome.wustl.edu	37	6	100062377	100062377	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	100062377	100062377	G	A	SNP	PRDM13	ENST00000369215	human	ensembl	74_37	+1	known	silent	c.1866	p.L622	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM13	HGNC	ENSG00000112238	tier1	-	-	52	0	0.00	36	14	28.00
PRDM4	0	genome.wustl.edu	37	12	108128295	108128295	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	108128295	108128295	G	A	SNP	PRDM4	ENST00000228437	human	ensembl	74_37	-1	known	missense	c.2098	p.R700C	1.000	pirsf_Znf_PRDM4,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pirsf_Znf_PRDM4,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM4	HGNC	ENSG00000110851				32	0	0.00	24	8	25.00
PRG4	0	genome.wustl.edu	37	1	186273952	186273954	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	186273952	186273954	TCC	-	DEL	PRG4	ENST00000445192	human	ensembl	74_37	+1	known	in_frame_del	c.496_498	p.S169in_frame_del	1.000:1.000:1.000	NULL	pfam_Somatomedin_B_dom,pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Somatomedin_B_dom,smart_Hemopexin-like_repeat,prints_Somatomedin_B_chordata,pfscan_Somatomedin_B_dom	-	no_errors	PRG4	HGNC	ENSG00000116690	tier1			47	0	0.00	46	18	28.12
PRG4	0	genome.wustl.edu	37	1	186276771	186276771	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	186276771	186276771	C	T	SNP	PRG4	ENST00000445192	human	ensembl	74_37	+1	known	silent	c.1920	p.P640	0.000	NULL	pfam_Somatomedin_B_dom,pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Somatomedin_B_dom,smart_Hemopexin-like_repeat,prints_Somatomedin_B_chordata,pfscan_Somatomedin_B_dom	-	no_errors	PRG4	HGNC	ENSG00000116690	tier1	rs142961862	-	76	0	0.00	44	19	30.16
PRKCB	0	genome.wustl.edu	37	16	24105543	24105543	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	24105543	24105543	T	C	SNP	PRKCB	ENST00000303531	human	ensembl	74_37	+1	known	missense	c.746	p.L249S	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_C2_dom	-	no_errors	PRKCB	HGNC	ENSG00000166501	tier1	-	-	74	0	0.00	59	14	19.18
PRKCZ	0	genome.wustl.edu	37	1	2116391	2116391	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	2116391	2116391	G	A	SNP	PRKCZ	ENST00000378567	human	ensembl	74_37	+1	known	silent	c.1722	p.E574	1.000	pfam_Pkinase_C,smart_AGC-kinase_C,pirsf_PKC_zeta	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_OPR_PB1,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_OPR_PB1,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_PKC_zeta,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKCZ	HGNC	ENSG00000067606	tier1	-	-	57	0	0.00	39	7	15.22
PRKD1	0	genome.wustl.edu	37	14	30046584	30046584	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	30046584	30046584	G	T	SNP	PRKD1	ENST00000331968	human	ensembl	74_37	-1	known	missense	c.2599	p.L867M	0.029	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	PRKD1	HGNC	ENSG00000184304	tier1	-	-	55	0	0.00	31	14	31.11
PRKDC	0	genome.wustl.edu	37	8	48767818	48767818	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	48767818	48767818	G	A	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	silent	c.6723	p.V2241	0.976	superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1	-	-	49	0	0.00	68	4	5.56
PRKDC	0	genome.wustl.edu	37	8	48776098	48776098	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	48776098	48776098	A	G	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	missense	c.5609	p.M1870T	1.000	pfam_NUC194,superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1	-	-	41	0	0.00	62	14	18.42
PRKG2	0	genome.wustl.edu	37	4	82061765	82061765	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	82061765	82061765	A	G	SNP	PRKG2	ENST00000264399	human	ensembl	74_37	-1	known	missense	c.1466	p.I489T	0.999	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_cGMP-dependent_protein_kinase,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_cNMP-bd_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_cGMP-dependent_protein_kinase,pfscan_cNMP-bd_dom,pfscan_Prot_kinase_dom,prints_cGMP_dep_kinase,prints_cAMP/cGMP_kin	-	no_errors	PRKG2	HGNC	ENSG00000138669	tier1	-	-	24	0	0.00	26	4	13.33
PRKRIR	0	genome.wustl.edu	37	11	76062779	76062779	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	76062779	76062779	C	T	SNP	PRKRIR	ENST00000260045	human	ensembl	74_37	-1	known	missense	c.1415	p.S472N	1.000	superfamily_RNaseH-like_dom	pfam_Znf_C2CH,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	PRKRIR	HGNC	ENSG00000137492	tier1	-	-	56	0	0.00	56	5	8.20
PRKXP1	0	genome.wustl.edu	37	15	101088126	101088126	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	101088126	101088126	T	-	DEL	PRKXP1	ENST00000602585	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-526I2.5	Clone_based_vega_gene	ENSG00000270127	tier1			23	0	0.00	20	5	20.00
PRMT8	0	genome.wustl.edu	37	12	3600863	3600863	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	3600863	3600863	C	A	SNP	PRMT8	ENST00000382622	human	ensembl	74_37	+1	known	silent	c.72	p.T24	0.999	NULL	pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Arg_MeTrfase,pfam_Methyltransf_11,pfam_tRNA_Trfase_Trm5/Tyw2	-	no_errors	PRMT8	HGNC	ENSG00000111218	tier1	-	-	22	0	0.00	21	5	19.23
PROB1	0	genome.wustl.edu	37	5	138728473	138728473	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	138728473	138728473	C	A	SNP	PROB1	ENST00000434752	human	ensembl	74_37	-1	known	missense	c.2298	p.Q766H	0.575	NULL	NULL	-	no_errors	PROB1	HGNC	ENSG00000228672	tier1	-	-	40	0	0.00	28	13	31.71
PROX1	0	genome.wustl.edu	37	1	214169975	214169975	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	214169975	214169975	T	-	DEL	PROX1	ENST00000261454	human	ensembl	74_37	+1	known	frame_shift_del	c.97	p.F34fs	1.000	NULL	pfam_Homeo_prospero_dom,superfamily_Homeodomain-like	-	no_errors	PROX1	HGNC	ENSG00000117707	tier1			67	0	0.00	57	9	13.64
PRPF40A	0	genome.wustl.edu	37	2	153520287	153520288	+	Splice_Site	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	153520287	153520288	-	A	INS	PRPF40A	ENST00000410080	human	ensembl	74_37	-1	known	splice_site_ins	c.1972-3_1972-2	e19-2	1.000:0.141	-	-	-	no_errors	PRPF40A	HGNC	ENSG00000196504	tier1			49	0	0.00	35	12	25.53
PRPF40B	0	genome.wustl.edu	37	12	50026386	50026386	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	50026386	50026386	C	T	SNP	PRPF40B	ENST00000548825	human	ensembl	74_37	+1	known	missense	c.302	p.P101L	1.000	NULL	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom	-	no_errors	PRPF40B	HGNC	ENSG00000110844	tier1	-	-	69	0	0.00	57	4	6.56
PRPF4B	0	genome.wustl.edu	37	6	4052975	4052975	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	4052975	4052975	A	-	DEL	PRPF4B	ENST00000337659	human	ensembl	74_37	+1	known	frame_shift_del	c.2334	p.K780fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PRPF4B	HGNC	ENSG00000112739	tier1			30	0	0.00	43	8	15.69
PRPF8	0	genome.wustl.edu	37	17	1582092	1582092	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	1582092	1582092	G	A	SNP	PRPF8	ENST00000304992	human	ensembl	74_37	-1	known	silent	c.1683	p.H561	0.891	pfam_PROCN,superfamily_Histone-fold	pfam_PROCN,pfam_PRP8_domainIV,pfam_Prp8_U6-snRNA-bd,pfam_PRO8NT,pfam_Prp8_U5-snRNA-bd,pfam_PROCT,pfam_RRM_spliceosomal_PrP8,pfam_JAB_MPN_dom,superfamily_Cupredoxin,superfamily_Histone-fold,smart_JAB_MPN_dom	-	no_errors	PRPF8	HGNC	ENSG00000174231				29	0	0.00	8	2	20.00
PRR12	0	genome.wustl.edu	37	19	50097858	50097858	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	50097858	50097858	C	A	SNP	PRR12	ENST00000418929	human	ensembl	74_37	+1	novel	missense	c.347	p.P116H	0.999	NULL	NULL	-	no_errors	PRR12	HGNC	ENSG00000126464	tier1	-	-	62	0	0.00	42	5	10.64
PRR14L	0	genome.wustl.edu	37	22	32099549	32099549	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	32099549	32099549	G	-	DEL	PRR14L	ENST00000397493	human	ensembl	74_37	-1	known	frame_shift_del	c.5987	p.P1996fs	0.508	NULL	NULL	-	no_errors	PRR14L	HGNC	ENSG00000183530	tier1			47	0	0.00	41	9	18.00
PRR14L	0	genome.wustl.edu	37	22	32111916	32111916	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	32111916	32111916	A	G	SNP	PRR14L	ENST00000397493	human	ensembl	74_37	-1	known	missense	c.1909	p.C637R	0.015	NULL	NULL	-	no_errors	PRR14L	HGNC	ENSG00000183530	tier1	-	-	62	0	0.00	52	6	10.34
PRR5L	0	genome.wustl.edu	37	11	36472847	36472847	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	36472847	36472847	G	T	SNP	PRR5L	ENST00000378867	human	ensembl	74_37	+1	known	missense	c.674	p.S225I	0.931	NULL	pfam_HbrB	-	no_errors	PRR5L	HGNC	ENSG00000135362	tier1	-	-	72	0	0.00	65	4	5.80
PRRC2B	0	genome.wustl.edu	37	9	134319642	134319642	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	134319642	134319642	G	A	SNP	PRRC2B	ENST00000357304	human	ensembl	74_37	+1	known	silent	c.540	p.G180	1.000	pfam_BAT2_N	pfam_BAT2_N	-	no_errors	PRRC2B	HGNC	ENSG00000130723	tier1	-	-	65	0	0.00	38	14	26.92
PRRC2C	0	genome.wustl.edu	37	1	171535520	171535520	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	171535520	171535520	G	A	SNP	PRRC2C	ENST00000392078	human	ensembl	74_37	+1	known	missense	c.6266	p.R2089Q	1.000	NULL	pfam_BAT2_N	-	no_errors	PRRC2C	HGNC	ENSG00000117523	tier1	-	-	48	0	0.00	35	9	20.45
PRRT3	0	genome.wustl.edu	37	3	9989596	9989596	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	9989596	9989596	G	A	SNP	PRRT3	ENST00000295984	human	ensembl	74_37	-1	known	nonsense	c.1261	p.R421*	1.000	NULL	NULL	-	no_errors	PRRT3	HGNC	ENSG00000163704	tier1	-	-	27	0	0.00	13	4	23.53
PRSS22	0	genome.wustl.edu	37	16	2903146	2903146	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	2903146	2903146	C	-	DEL	PRSS22	ENST00000161006	human	ensembl	74_37	-1	known	frame_shift_del	c.902	p.G301fs	0.010	NULL	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	PRSS22	HGNC	ENSG00000005001	tier1			10	0	0.00	6	4	40.00
PRSS42	0	genome.wustl.edu	37	3	46875570	46875570	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	46875570	46875570	C	T	SNP	PRSS42	ENST00000429665	human	ensembl	74_37	-1	known	missense	c.16	p.G6S	0.000	NULL	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS42	HGNC	ENSG00000178055	tier1	-	-	39	0	0.00	20	11	35.48
PRSS51	0	genome.wustl.edu	37	8	10356254	10356254	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	10356254	10356254	C	T	SNP	PRSS51	ENST00000521149	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	PRSS51	HGNC	ENSG00000253649	tier1	-	-	36	0	0.00	44	5	10.20
PSD4	0	genome.wustl.edu	37	2	113956432	113956432	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	113956432	113956432	C	A	SNP	PSD4	ENST00000245796	human	ensembl	74_37	+1	known	missense	c.2740	p.L914M	1.000	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD4	HGNC	ENSG00000125637	tier1	-	-	23	0	0.00	11	4	26.67
PSD4	0	genome.wustl.edu	37	2	113956438	113956438	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	113956438	113956438	G	A	SNP	PSD4	ENST00000245796	human	ensembl	74_37	+1	known	missense	c.2746	p.V916M	0.000	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD4	HGNC	ENSG00000125637	tier1	-	-	21	0	0.00	12	4	25.00
PSEN2	0	genome.wustl.edu	37	1	227078994	227078994	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	227078994	227078994	C	T	SNP	PSEN2	ENST00000391872	human	ensembl	74_37	+1	known	missense	c.1001	p.T334M	0.711	pfam_Peptidase_A22A,smart_Preselin/SPP	pfam_Peptidase_A22A,smart_Preselin/SPP,prints_Pept_A22A_PS2,prints_Peptidase_A22A	-	no_errors	PSEN2	HGNC	ENSG00000143801	tier1	rs144277432	-	47	0	0.00	33	10	23.26
PSG2	0	genome.wustl.edu	37	19	43585990	43585991	+	RNA	DEL	TT	TT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	43585990	43585991	TT	-	DEL	PSG2	ENST00000491995	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004:0.005	-	-	-	no_errors	PSG2	HGNC	ENSG00000242221	tier1			20	0	0.00	10	7	41.18
PSG8	0	genome.wustl.edu	37	19	43257204	43257204	+	RNA	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	43257204	43257204	C	A	SNP	PSG8	ENST00000600709	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.070	-	-	-	no_errors	PSG8	HGNC	ENSG00000124467	tier1	-	-	18	0	0.00	16	6	27.27
PSIP1	0	genome.wustl.edu	37	9	15472612	15472613	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	15472612	15472613	AA	-	DEL	PSIP1	ENST00000495873	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	PSIP1	HGNC	ENSG00000164985	tier1			41	0	0.00	27	10	27.03
PSMD1	0	genome.wustl.edu	37	2	232030597	232030597	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	232030597	232030597	A	-	DEL	PSMD1	ENST00000308696	human	ensembl	74_37	+1	known	frame_shift_del	c.2581	p.K862fs	1.000	pirsf_26S_Psome_Rpn2	pfam_Proteasome/cyclosome_rpt,superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn2	-	no_errors	PSMD1	HGNC	ENSG00000173692	tier1			41	0	0.00	30	5	14.29
PSME4	0	genome.wustl.edu	37	2	54093345	54093345	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	54093345	54093345	T	-	DEL	PSME4	ENST00000404125	human	ensembl	74_37	-1	known	frame_shift_del	c.5413	p.T1805fs	1.000	pfam_DUF3437,superfamily_ARM-type_fold	pfam_DUF3437,superfamily_ARM-type_fold	-	no_errors	PSME4	HGNC	ENSG00000068878	tier1			52	0	0.00	48	11	18.64
PSMF1	0	genome.wustl.edu	37	20	1145699	1145699	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	1145699	1145699	C	T	SNP	PSMF1	ENST00000333082	human	ensembl	74_37	+1	known	missense	c.791	p.P264L	1.000	NULL	pfam_FP_dom,pfam_PI31_Prot_Reg	-	no_errors	PSMF1	HGNC	ENSG00000125818	tier1	-	-	65	0	0.00	40	4	9.09
PSPH	0	genome.wustl.edu	37	7	56079283	56079285	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	56079283	56079285	AAA	-	DEL	PSPH	ENST00000459834	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.001:0.001	-	-	-	no_errors	PSPH	HGNC	ENSG00000146733	tier1			23	0	0.00	14	5	26.32
PTCH1	0	genome.wustl.edu	37	9	98211549	98211549	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	98211549	98211549	G	-	DEL	PTCH1	ENST00000331920	human	ensembl	74_37	-1	known	frame_shift_del	c.3606	p.S1203fs	0.012	tigrfam_TM_rcpt_patched	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH1	HGNC	ENSG00000185920	tier1			76	0	0.00	57	12	17.39
PTCH1	0	genome.wustl.edu	37	9	98244509	98244509	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	98244509	98244509	A	-	DEL	PTCH1	ENST00000550914	human	ensembl	74_37	-1	known	frame_shift_del	c.143	p.L48fs	0.653	NULL	NULL	-	no_errors	PTCH1	HGNC	ENSG00000185920	tier1			40	0	0.00	25	3	10.71
PTEN	0	genome.wustl.edu	37	10	89720738	89720738	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	89720738	89720738	G	A	SNP	PTEN	ENST00000371953	human	ensembl	74_37	+1	known	missense	c.889	p.D297N	1.000	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tensin_phosphatase_C2-dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_dom,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862	tier1	-	-	52	0	0.00	45	11	19.64
PTENP1	0	genome.wustl.edu	37	9	33674344	33674346	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	33674344	33674346	TTT	-	DEL	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.837:0.842:0.847	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984	tier1			17	0	0.00	12	5	29.41
PTENP1	0	genome.wustl.edu	37	9	33676993	33676993	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	33676993	33676993	C	T	SNP	PTENP1	ENST00000532280	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.070	-	-	-	no_errors	PTENP1	HGNC	ENSG00000237984	tier1	-	-	11	0	0.00	8	5	38.46
PTF1A	0	genome.wustl.edu	37	10	23481496	23481496	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	23481496	23481496	C	A	SNP	PTF1A	ENST00000376504	human	ensembl	74_37	+1	known	missense	c.37	p.L13I	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	PTF1A	HGNC	ENSG00000168267	tier1	-	-	49	0	0.00	32	8	20.00
PTN	0	genome.wustl.edu	37	7	136938294	136938294	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	136938294	136938294	C	T	SNP	PTN	ENST00000348225	human	ensembl	74_37	-1	known	missense	c.206	p.G69D	1.000	pfam_PTN/MK_N_dom,superfamily_PTN/MK_diS,smart_Midkine_heparin-bd_GF,prints_Midkine_heparin-bd_GF	pfam_PTN/MK_C_dom,pfam_PTN/MK_N_dom,superfamily_PTN/MK_diS,smart_Midkine_heparin-bd_GF,prints_Midkine_heparin-bd_GF	-	no_errors	PTN	HGNC	ENSG00000105894				25	0	0.00	22	2	8.33
PTOV1	0	genome.wustl.edu	37	19	50363527	50363527	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	50363527	50363527	G	-	DEL	PTOV1	ENST00000391842	human	ensembl	74_37	+1	known	frame_shift_del	c.1242	p.*417fs	1.000	NULL	pfam_Mediator_Med25	-	no_errors	PTOV1	HGNC	ENSG00000104960	tier1			78	0	0.00	44	29	39.73
PTPLAD1	0	genome.wustl.edu	37	15	65868695	65868695	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	65868695	65868695	A	-	DEL	PTPLAD1	ENST00000261875	human	ensembl	74_37	+1	known	frame_shift_del	c.1067	p.K358fs	1.000	NULL	pfam_Tyr_Pase-like_PTPLA,pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom	-	no_errors	PTPLAD1	HGNC	ENSG00000074696	tier1			41	0	0.00	27	8	22.86
PTPLAD1	0	genome.wustl.edu	37	15	65868701	65868701	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	65868701	65868701	A	G	SNP	PTPLAD1	ENST00000261875	human	ensembl	74_37	+1	known	missense	c.1073	p.K358R	1.000	NULL	pfam_Tyr_Pase-like_PTPLA,pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom	-	no_errors	PTPLAD1	HGNC	ENSG00000074696				39	0	0.00	33	5	13.16
PTPLAD1	0	genome.wustl.edu	37	15	65868702	65868702	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	65868702	65868702	G	A	SNP	PTPLAD1	ENST00000261875	human	ensembl	74_37	+1	known	silent	c.1074	p.K358	1.000	NULL	pfam_Tyr_Pase-like_PTPLA,pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom	-	no_errors	PTPLAD1	HGNC	ENSG00000074696				39	0	0.00	32	5	13.51
PTPN21	0	genome.wustl.edu	37	14	89016861	89016861	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	89016861	89016861	A	G	SNP	PTPN21	ENST00000554628	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PTPN21	HGNC	ENSG00000070778	tier1	-	-	57	0	0.00	59	11	15.71
PTPRA	0	genome.wustl.edu	37	20	3001962	3001962	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	3001962	3001962	G	A	SNP	PTPRA	ENST00000425918	human	ensembl	74_37	+1	known	missense	c.1082	p.C361Y	1.000	pirsf_Tyr_Pase_rcpt_a/e-type,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Tyr_Pase_rcpt_a/e-type,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRA	HGNC	ENSG00000132670	tier1	-	-	82	0	0.00	53	6	10.17
PTPRC	0	genome.wustl.edu	37	1	198697519	198697519	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	198697519	198697519	T	C	SNP	PTPRC	ENST00000442510	human	ensembl	74_37	+1	known	missense	c.1771	p.S591P	1.000	pirsf_Leukocyte_common_ag	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Leukocyte_common_ag,pfam_PTP_recept_N,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRC	HGNC	ENSG00000081237	tier1	-	-	91	0	0.00	75	29	27.88
PTPRH	0	genome.wustl.edu	37	19	55697597	55697597	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	55697597	55697597	C	T	SNP	PTPRH	ENST00000376350	human	ensembl	74_37	-1	known	missense	c.2774	p.G925D	0.976	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRH	HGNC	ENSG00000080031	tier1	-	-	64	0	0.00	47	12	20.34
PTPRK	0	genome.wustl.edu	37	6	128321225	128321225	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	128321225	128321225	A	-	DEL	PTPRK	ENST00000524481	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.625	-	-	-	no_errors	PTPRK	HGNC	ENSG00000152894	tier1			11	0	0.00	11	7	38.89
PTPRM	0	genome.wustl.edu	37	18	7955190	7955190	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	7955190	7955190	G	A	SNP	PTPRM	ENST00000400060	human	ensembl	74_37	+1	known	missense	c.910	p.A304T	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRM	HGNC	ENSG00000173482	tier1	-	-	32	0	0.00	23	10	30.30
PTPRN	0	genome.wustl.edu	37	2	220161986	220161986	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	220161986	220161986	T	C	SNP	PTPRN	ENST00000295718	human	ensembl	74_37	-1	known	missense	c.2057	p.N686S	1.000	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Receptor_IA-2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRN	HGNC	ENSG00000054356	tier1	-	-	73	0	0.00	57	9	13.64
PTPRVP	0	genome.wustl.edu	37	1	202140354	202140354	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	202140354	202140354	G	T	SNP	PTPRVP	ENST00000482597	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	PTPRVP	HGNC	ENSG00000243323	tier1	-	-	51	0	0.00	50	4	7.41
PXDN	0	genome.wustl.edu	37	2	1652402	1652402	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	1652402	1652402	G	A	SNP	PXDN	ENST00000252804	human	ensembl	74_37	-1	known	silent	c.3150	p.Y1050	0.676	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDN	HGNC	ENSG00000130508	tier1	-	-	29	0	0.00	14	3	17.65
PXDN	0	genome.wustl.edu	37	2	1677547	1677547	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	1677547	1677547	A	G	SNP	PXDN	ENST00000252804	human	ensembl	74_37	-1	known	silent	c.886	p.L296	0.617	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDN	HGNC	ENSG00000130508	tier1	-	-	55	0	0.00	29	12	29.27
PXDN	0	genome.wustl.edu	37	2	1680771	1680771	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	1680771	1680771	G	A	SNP	PXDN	ENST00000252804	human	ensembl	74_37	-1	known	missense	c.776	p.S259L	0.921	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDN	HGNC	ENSG00000130508	tier1	-	-	44	0	0.00	26	15	36.59
PYCR1	0	genome.wustl.edu	37	17	79892835	79892835	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	79892835	79892835	G	A	SNP	PYCR1	ENST00000329875	human	ensembl	74_37	-1	known	silent	c.507	p.A169	0.877	superfamily_6-PGluconate_DH_C-like,pirsf_Pyrroline-COOH_reductase,tigrfam_Pyrroline-COOH_reductase	pfam_G3P_DH_NAD-dep_N,superfamily_6-PGluconate_DH_C-like,pirsf_Pyrroline-COOH_reductase,tigrfam_Pyrroline-COOH_reductase	-	no_errors	PYCR1	HGNC	ENSG00000183010	tier1	-	-	73	0	0.00	51	8	13.56
PYROXD1	0	genome.wustl.edu	37	12	21608074	21608074	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	21608074	21608074	T	A	SNP	PYROXD1	ENST00000240651	human	ensembl	74_37	+1	known	missense	c.497	p.I166N	1.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,prints_FAD_pyr_nucl-diS_OxRdtase	-	no_errors	PYROXD1	HGNC	ENSG00000121350	tier1	-	-	40	0	0.00	28	7	19.44
QKI	0	genome.wustl.edu	37	6	163899920	163899920	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	163899920	163899920	A	-	DEL	QKI	ENST00000361752	human	ensembl	74_37	+1	known	frame_shift_del	c.394	p.K134fs	1.000	smart_KH_dom	pfam_KH_dom_type_1,smart_KH_dom	-	no_errors	QKI	HGNC	ENSG00000112531	tier1			66	0	0.00	65	13	16.67
RAB11FIP1	0	genome.wustl.edu	37	8	37728987	37728987	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	37728987	37728987	G	T	SNP	RAB11FIP1	ENST00000330843	human	ensembl	74_37	-1	known	silent	c.3333	p.P1111	0.000	NULL	pfam_Rab-bd_FIP-RBD,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RAB11FIP1	HGNC	ENSG00000156675	tier1	-	-	52	0	0.00	73	4	5.19
RAB11FIP2	0	genome.wustl.edu	37	10	119768615	119768615	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	119768615	119768615	T	C	SNP	RAB11FIP2	ENST00000369199	human	ensembl	74_37	-1	known	missense	c.1493	p.E498G	1.000	pfam_Rab-bd_FIP-RBD	pfam_Rab-bd_FIP-RBD,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RAB11FIP2	HGNC	ENSG00000107560	tier1	-	-	44	0	0.00	44	5	10.20
RAB13	0	genome.wustl.edu	37	1	153954703	153954703	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	153954703	153954703	G	A	SNP	RAB13	ENST00000462680	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RAB13	HGNC	ENSG00000143545	tier1	-	-	61	0	0.00	57	5	8.06
RAB20	0	genome.wustl.edu	37	13	111176254	111176254	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	111176254	111176254	C	T	SNP	RAB20	ENST00000267328	human	ensembl	74_37	-1	known	missense	c.463	p.V155M	0.014	pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB20	HGNC	ENSG00000139832	tier1	-	-	43	0	0.00	30	13	30.23
RAB35	0	genome.wustl.edu	37	12	120534289	120534289	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	120534289	120534289	G	A	SNP	RAB35	ENST00000432953	human	ensembl	74_37	-1	known	missense	c.761	p.S254F	0.024	NULL	NULL	-	no_errors	RAB35	HGNC	ENSG00000111737				39	0	0.00	24	4	14.29
RAB3B	0	genome.wustl.edu	37	1	52385688	52385688	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	52385688	52385688	G	T	SNP	RAB3B	ENST00000371655	human	ensembl	74_37	-1	known	missense	c.571	p.L191M	0.158	superfamily_P-loop_NTPase,smart_Ran_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB3B	HGNC	ENSG00000169213	tier1	-	-	32	0	0.00	21	3	12.50
RABEPK	0	genome.wustl.edu	37	9	127990265	127990265	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	127990265	127990265	A	G	SNP	RABEPK	ENST00000373538	human	ensembl	74_37	+1	known	silent	c.603	p.A201	0.997	pfam_Kelch_1	pfam_Kelch_2,pfam_Kelch_1	-	no_errors	RABEPK	HGNC	ENSG00000136933	tier1	-	-	69	0	0.00	64	4	5.88
RABGAP1L	0	genome.wustl.edu	37	1	174517133	174517133	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	174517133	174517133	G	A	SNP	RABGAP1L	ENST00000357444	human	ensembl	74_37	+1	known	silent	c.1758	p.E586	0.000	NULL	pfam_Kinesin-like,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	RABGAP1L	HGNC	ENSG00000152061	tier1	-	-	65	0	0.00	70	6	7.89
RAD21	0	genome.wustl.edu	37	8	117862896	117862898	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	117862896	117862898	CTT	-	DEL	RAD21	ENST00000297338	human	ensembl	74_37	-1	known	in_frame_del	c.1581_1579	p.K527in_frame_del	1.000:1.000:1.000	pfam_ScpA	pfam_Rad21_Rec8_N,pfam_Rad21/Rec8_C_eu,pfam_ScpA	-	no_errors	RAD21	HGNC	ENSG00000164754	tier1			68	0	0.00	47	14	22.95
RAD54L2	0	genome.wustl.edu	37	3	51680478	51680478	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	51680478	51680478	G	A	SNP	RAD54L2	ENST00000409535	human	ensembl	74_37	+1	known	missense	c.3007	p.A1003T	0.999	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54L2	HGNC	ENSG00000164080	tier1	rs143819415	-	29	0	0.00	12	10	45.45
RALGAPA2	0	genome.wustl.edu	37	20	20565580	20565580	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	20565580	20565580	C	T	SNP	RALGAPA2	ENST00000202677	human	ensembl	74_37	-1	known	missense	c.2459	p.S820N	1.000	NULL	pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom	-	no_errors	RALGAPA2	HGNC	ENSG00000188559	tier1	-	-	32	0	0.00	26	4	13.33
RALGAPB	0	genome.wustl.edu	37	20	37146233	37146233	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	37146233	37146233	C	-	DEL	RALGAPB	ENST00000262879	human	ensembl	74_37	+1	known	frame_shift_del	c.1136	p.P381fs	1.000	NULL	superfamily_ARM-type_fold,pfscan_Rap_GAP_dom	-	no_errors	RALGAPB	HGNC	ENSG00000170471	tier1			104	0	0.00	57	20	25.97
RAN	0	genome.wustl.edu	37	12	131360212	131360212	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	131360212	131360212	T	G	SNP	RAN	ENST00000392369	human	ensembl	74_37	+1	known	missense	c.491	p.L164R	1.000	pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAN	HGNC	ENSG00000132341	tier1	-	-	78	0	0.00	57	20	25.64
RAP1GDS1	0	genome.wustl.edu	37	4	99363154	99363154	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	99363154	99363154	G	A	SNP	RAP1GDS1	ENST00000339360	human	ensembl	74_37	+1	known	silent	c.1713	p.K571	1.000	superfamily_ARM-type_fold	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	RAP1GDS1	HGNC	ENSG00000138698	tier1	-	-	43	0	0.00	40	9	18.37
RAPGEF1	0	genome.wustl.edu	37	9	134501680	134501680	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	134501680	134501680	C	T	SNP	RAPGEF1	ENST00000372190	human	ensembl	74_37	-1	known	missense	c.1334	p.G445D	1.000	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF1	HGNC	ENSG00000107263	tier1	-	-	64	0	0.00	46	23	33.33
RAPGEF2	0	genome.wustl.edu	37	4	160225603	160225603	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	160225603	160225603	G	A	SNP	RAPGEF2	ENST00000264431	human	ensembl	74_37	+1	known	missense	c.170	p.S57N	1.000	NULL	pfam_RasGRF_CDC25,pfam_Ras-assoc,pfam_Ras-like_Gua-exchang_fac_N,pfam_PDZ,pfam_cNMP-bd_dom,superfamily_Ras_GEF_dom,superfamily_PDZ,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_PDZ,smart_Ras-assoc,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_PDZ,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF2	HGNC	ENSG00000109756	tier1	-	-	61	0	0.00	64	7	9.86
RAPGEF4	0	genome.wustl.edu	37	2	173885367	173885367	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	173885367	173885367	A	G	SNP	RAPGEF4	ENST00000397081	human	ensembl	74_37	+1	known	missense	c.2177	p.N726S	1.000	pfam_Ras-assoc,superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,pfam_cNMP-bd_dom,pfam_DEP_dom,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_DEP_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_DEP_dom,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_cAMP/cGMP_kin	-	no_errors	RAPGEF4	HGNC	ENSG00000091428	tier1	-	-	59	0	0.00	38	17	30.91
RAPH1	0	genome.wustl.edu	37	2	204309641	204309641	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	204309641	204309641	C	T	SNP	RAPH1	ENST00000374493	human	ensembl	74_37	-1	known	missense	c.1882	p.V628I	1.000	superfamily_Kinase-like_dom	pfam_Ras-assoc,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ras-assoc,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,prints_Paxillin	-	no_errors	RAPH1	HGNC	ENSG00000173166	tier1	-	-	69	0	0.00	41	21	33.87
RASA1	0	genome.wustl.edu	37	5	86669996	86669996	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	86669996	86669996	T	C	SNP	RASA1	ENST00000274376	human	ensembl	74_37	+1	known	missense	c.1793	p.L598S	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_SH2,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_SH3_domain,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_SH2,smart_SH3_domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_RasGAP,prints_SH2	-	no_errors	RASA1	HGNC	ENSG00000145715	tier1	-	-	53	0	0.00	38	6	13.64
RASA1	0	genome.wustl.edu	37	5	86675571	86675571	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	86675571	86675571	A	-	DEL	RASA1	ENST00000274376	human	ensembl	74_37	+1	known	frame_shift_del	c.2507	p.N838fs	1.000	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,smart_RasGAP,pfscan_RasGAP	pfam_SH2,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_SH3_domain,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_SH2,smart_SH3_domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_RasGAP,prints_SH2	-	no_errors	RASA1	HGNC	ENSG00000145715	tier1			50	0	0.00	29	5	14.71
RASA1	0	genome.wustl.edu	37	5	86675607	86675607	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	86675607	86675607	T	C	SNP	RASA1	ENST00000274376	human	ensembl	74_37	+1	known	missense	c.2543	p.L848P	1.000	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,smart_RasGAP,pfscan_RasGAP	pfam_SH2,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_SH3_domain,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_SH2,smart_SH3_domain,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_RasGAP,prints_SH2	-	no_errors	RASA1	HGNC	ENSG00000145715	tier1	-	-	46	0	0.00	30	6	16.67
RASAL1	0	genome.wustl.edu	37	12	113537619	113537619	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	113537619	113537619	C	T	SNP	RASAL1	ENST00000549444	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	RASAL1	HGNC	ENSG00000111344	tier1	-	-	24	0	0.00	23	5	17.86
RASAL2	0	genome.wustl.edu	37	1	178436542	178436542	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	178436542	178436542	A	T	SNP	RASAL2	ENST00000367649	human	ensembl	74_37	+1	known	missense	c.3664	p.I1222L	1.000	pfam_DUF3498	pfam_DUF3498,pfam_RasGAP,pfam_Pleckstrin_homology,pfam_C2_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,superfamily_PP1_inhibitor,smart_Pleckstrin_homology,smart_C2_dom,smart_RasGAP,pfscan_Pleckstrin_homology,pfscan_RasGAP	-	no_errors	RASAL2	HGNC	ENSG00000075391				22	0	0.00	34	4	10.53
RASAL2-AS1	0	genome.wustl.edu	37	1	178062370	178062370	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	178062370	178062370	C	T	SNP	RASAL2-AS1	ENST00000419458	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RASAL2-AS1	HGNC	ENSG00000224687	tier1	-	-	38	0	0.00	38	4	9.52
RASEF	0	genome.wustl.edu	37	9	85637251	85637251	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	85637251	85637251	G	A	SNP	RASEF	ENST00000376447	human	ensembl	74_37	-1	known	silent	c.669	p.D223	0.080	superfamily_Vinculin/catenin	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_Vinculin/catenin,smart_EF_hand_dom,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,pfscan_EF_hand_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	RASEF	HGNC	ENSG00000165105	tier1	-	-	54	0	0.00	45	16	26.23
RASGRP1	0	genome.wustl.edu	37	15	38786678	38786678	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	38786678	38786678	G	A	SNP	RASGRP1	ENST00000310803	human	ensembl	74_37	-1	known	missense	c.2164	p.R722W	1.000	NULL	pfam_RasGRF_CDC25,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_DAG/PE-bd	-	no_errors	RASGRP1	HGNC	ENSG00000172575	tier1	-	-	54	0	0.00	25	14	35.90
RAVER2	0	genome.wustl.edu	37	1	65296647	65296647	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	65296647	65296647	A	-	DEL	RAVER2	ENST00000294428	human	ensembl	74_37	+1	known	frame_shift_del	c.2055	p.K687fs	0.993	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RAVER2	HGNC	ENSG00000162437	tier1			65	0	0.00	47	11	18.97
RB1CC1	0	genome.wustl.edu	37	8	53554985	53554985	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	53554985	53554985	T	C	SNP	RB1CC1	ENST00000025008	human	ensembl	74_37	-1	known	silent	c.4263	p.S1421	0.018	NULL	pfam_Autophagy-rel_p11	-	no_errors	RB1CC1	HGNC	ENSG00000023287	tier1	-	-	53	0	0.00	45	8	15.09
RB1CC1	0	genome.wustl.edu	37	8	53574183	53574183	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	53574183	53574183	A	T	SNP	RB1CC1	ENST00000025008	human	ensembl	74_37	-1	known	missense	c.1270	p.L424M	1.000	NULL	pfam_Autophagy-rel_p11	-	no_errors	RB1CC1	HGNC	ENSG00000023287	tier1	-	-	47	0	0.00	58	8	12.12
RBBP4	0	genome.wustl.edu	37	1	33134598	33134598	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	33134598	33134598	C	T	SNP	RBBP4	ENST00000373493	human	ensembl	74_37	+1	known	missense	c.626	p.A209V	0.999	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_Histone-bd_RBBP4_N,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RBBP4	HGNC	ENSG00000162521	tier1	-	-	22	0	0.00	12	4	25.00
RBBP6	0	genome.wustl.edu	37	16	24583221	24583221	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	24583221	24583221	G	A	SNP	RBBP6	ENST00000319715	human	ensembl	74_37	+1	known	missense	c.4834	p.V1612I	0.000	NULL	pfam_DWNN_domain,pfam_Ubox_domain,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,smart_Znf_RING,pfscan_Znf_RING,pfscan_Znf_CCHC	-	no_errors	RBBP6	HGNC	ENSG00000122257	tier1	-	-	47	0	0.00	35	7	16.67
RBBP8	0	genome.wustl.edu	37	18	20606158	20606158	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	20606158	20606158	T	C	SNP	RBBP8	ENST00000399725	human	ensembl	74_37	+1	known	missense	c.2552	p.L851P	1.000	NULL	pfam_CtIP_N	-	no_errors	RBBP8	HGNC	ENSG00000101773	tier1	-	-	50	0	0.00	41	5	10.87
RBFOX3	0	genome.wustl.edu	37	17	77093503	77093503	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	77093503	77093503	G	A	SNP	RBFOX3	ENST00000415831	human	ensembl	74_37	-1	known	missense	c.626	p.T209M	1.000	pfam_Fox-1_C_dom,pirsf_RNA-bd_Fox-1	pfam_Fox-1_C_dom,pfam_RRM_dom,smart_RRM_dom,pirsf_RNA-bd_Fox-1,pfscan_RRM_dom	-	no_errors	RBFOX3	HGNC	ENSG00000167281				22	0	0.00	13	5	27.78
RBL1	0	genome.wustl.edu	37	20	35689630	35689630	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	35689630	35689630	A	G	SNP	RBL1	ENST00000373664	human	ensembl	74_37	-1	known	missense	c.1126	p.Y376H	0.988	NULL	pfam_RB_A,pfam_RB_B,pfam_RB_N,pfam_RB_C,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	RBL1	HGNC	ENSG00000080839	tier1	-	-	49	0	0.00	50	9	15.25
RBL2	0	genome.wustl.edu	37	16	53488648	53488648	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	53488648	53488648	C	T	SNP	RBL2	ENST00000262133	human	ensembl	74_37	+1	known	missense	c.1073	p.A358V	1.000	NULL	pfam_RB_A,pfam_RB_B,pfam_RB_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	RBL2	HGNC	ENSG00000103479	tier1	-	-	88	0	0.00	85	7	7.53
RBM12	0	genome.wustl.edu	37	20	34242923	34242923	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	34242923	34242923	G	T	SNP	RBM12	ENST00000359646	human	ensembl	74_37	-1	known	missense	c.322	p.P108T	0.494	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM12	HGNC	ENSG00000244462	tier1	-	-	67	0	0.00	48	4	7.69
RBM24	0	genome.wustl.edu	37	6	17283276	17283276	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	17283276	17283276	A	G	SNP	RBM24	ENST00000504055	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RBM24	HGNC	ENSG00000112183	tier1	-	-	11	0	0.00	7	7	50.00
RBM25	0	genome.wustl.edu	37	14	73570072	73570072	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	73570072	73570072	G	A	SNP	RBM25	ENST00000261973	human	ensembl	74_37	+1	known	missense	c.1040	p.R347Q	1.000	NULL	pfam_PWI_dom,pfam_RRM_dom,superfamily_PWI_dom,smart_RRM_dom,smart_PWI_dom,pfscan_RRM_dom	-	no_errors	RBM25	HGNC	ENSG00000119707	tier1	-	-	21	0	0.00	16	12	42.86
RBM33	0	genome.wustl.edu	37	7	155504069	155504070	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	155504069	155504070	0	T	INS	RBM33	ENST00000401878	human	ensembl	74_37	+1	known	frame_shift_ins	c.1121_1122	p.P375fs	0.998:0.029	NULL	smart_RRM_dom	-	no_errors	RBM33	HGNC	ENSG00000184863				92	0	0.00	82	8	8.89
RBMXL1	0	genome.wustl.edu	37	1	89449530	89449530	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	89449530	89449530	C	T	SNP	RBMXL1	ENST00000413769	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RBMXL1	HGNC	ENSG00000213516	tier1	-	-	68	0	0.00	30	5	14.29
RBPJL	0	genome.wustl.edu	37	20	43940969	43940969	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	43940969	43940969	C	A	SNP	RBPJL	ENST00000343694	human	ensembl	74_37	+1	known	missense	c.553	p.H185N	1.000	pfam_LAG1_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_Beta-trefoil_DNA-bd_dom,pfam_LAG1_DNA-bd,superfamily_Beta-trefoil_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set	-	no_errors	RBPJL	HGNC	ENSG00000124232	tier1	-	-	95	0	0.00	56	11	16.42
RCC2	0	genome.wustl.edu	37	1	17749315	17749315	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	17749315	17749315	G	T	SNP	RCC2	ENST00000375433	human	ensembl	74_37	-1	known	missense	c.541	p.Q181K	1.000	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,prints_Reg_chr_condens,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,prints_Reg_chr_condens,pfscan_Reg_chr_condens	-	no_errors	RCC2	HGNC	ENSG00000179051	tier1	-	-	67	0	0.00	39	11	22.00
RCE1	0	genome.wustl.edu	37	11	66612465	66612465	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	66612465	66612465	C	A	SNP	RCE1	ENST00000309657	human	ensembl	74_37	+1	known	missense	c.577	p.L193M	1.000	pfam_CAAX_protease	pfam_CAAX_protease	-	no_errors	RCE1	HGNC	ENSG00000173653				46	0	0.00	31	2	6.06
RCHY1	0	genome.wustl.edu	37	4	76407852	76407852	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	76407852	76407852	G	A	SNP	RCHY1	ENST00000324439	human	ensembl	74_37	-1	known	nonsense	c.682	p.R228*	0.994	NULL	pfam_Znf_CHY,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RCHY1	HGNC	ENSG00000163743	tier1	-	-	40	0	0.00	31	15	32.61
RDH5	0	genome.wustl.edu	37	12	56117811	56117812	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	56117811	56117812	-	G	INS	RDH5	ENST00000257895	human	ensembl	74_37	+1	known	frame_shift_ins	c.711_712	p.A239fs	0.947:1.000	NULL	pfam_DH_sc/Rdtase_SDR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_DHB_DH	-	no_errors	RDH5	HGNC	ENSG00000135437	tier1			67	0	0.00	57	8	12.31
RECK	0	genome.wustl.edu	37	9	36066767	36066767	+	RNA	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	36066767	36066767	C	A	SNP	RECK	ENST00000475774	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RECK	HGNC	ENSG00000122707	tier1	-	-	45	0	0.00	39	8	17.02
RECK	0	genome.wustl.edu	37	9	36102113	36102113	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	36102113	36102113	A	-	DEL	RECK	ENST00000377966	human	ensembl	74_37	+1	known	frame_shift_del	c.1321	p.K442fs	1.000	NULL	pfam_Kazal_dom,superfamily_Prot_inh_PMP,smart_Kazal_dom	-	no_errors	RECK	HGNC	ENSG00000122707	tier1			85	0	0.00	53	13	19.70
RELB	0	genome.wustl.edu	37	19	45537526	45537526	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	45537526	45537526	G	A	SNP	RELB	ENST00000221452	human	ensembl	74_37	+1	known	missense	c.1232	p.R411Q	1.000	superfamily_Ig_E-set	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	RELB	HGNC	ENSG00000104856	tier1	-	-	125	0	0.00	105	36	25.35
RELN	0	genome.wustl.edu	37	7	103137131	103137131	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	103137131	103137131	G	A	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	missense	c.9035	p.A3012V	0.999	superfamily_Sialidases	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056	tier1	-	-	51	0	0.00	30	4	11.76
RELN	0	genome.wustl.edu	37	7	103629675	103629675	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	103629675	103629675	G	A	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	silent	c.129	p.H43	1.000	pfscan_Reeler_dom	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056	tier1	-	-	77	0	0.00	84	17	16.83
REM1	0	genome.wustl.edu	37	20	30072036	30072036	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	30072036	30072036	G	A	SNP	REM1	ENST00000201979	human	ensembl	74_37	+1	known	missense	c.700	p.E234K	1.000	pirsf_Small_GTPase_GEM/REM/Rad,pfam_Small_GTPase,pfam_Fe2_transport_prot_B_N,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pirsf_Small_GTPase_GEM/REM/Rad,pfam_Small_GTPase,pfam_MIRO-like,pfam_Fe2_transport_prot_B_N,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	REM1	HGNC	ENSG00000088320	tier1	-	-	11	0	0.00	9	6	40.00
RERE	0	genome.wustl.edu	37	1	8555155	8555155	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	8555155	8555155	G	A	SNP	RERE	ENST00000337907	human	ensembl	74_37	-1	known	missense	c.1072	p.R358W	1.000	pfscan_ELM2_dom	pfam_Atrophin-like,pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	RERE	HGNC	ENSG00000142599	tier1	-	-	48	0	0.00	33	7	17.50
RERE	0	genome.wustl.edu	37	1	8419873	8419873	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	8419873	8419873	T	C	SNP	RERE	ENST00000337907	human	ensembl	74_37	-1	known	missense	c.3569	p.K1190R	1.000	pfam_Atrophin-like	pfam_Atrophin-like,pfam_BAH_dom,pfam_ELM2_dom,pfam_Znf_GATA,superfamily_Homeodomain-like,smart_BAH_dom,smart_SANT/Myb,smart_Znf_GATA,pfscan_BAH_dom,pfscan_ELM2_dom	-	no_errors	RERE	HGNC	ENSG00000142599				89	0	0.00	64	5	7.25
RFX1	0	genome.wustl.edu	37	19	14104410	14104410	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	14104410	14104410	G	A	SNP	RFX1	ENST00000254325	human	ensembl	74_37	-1	known	silent	c.246	p.P82	0.363	NULL	pfam_RFX1_trans_act,pfam_DNA-bd_RFX	-	no_errors	RFX1	HGNC	ENSG00000132005	tier1	-	-	100	0	0.00	73	24	24.49
RFX2	0	genome.wustl.edu	37	19	6013117	6013117	+	Splice_Site	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	6013117	6013117	C	A	SNP	RFX2	ENST00000303657	human	ensembl	74_37	-1	known	splice_site	c.780-1	e7-1	1.000	-	-	-	no_errors	RFX2	HGNC	ENSG00000087903	tier1	-	-	39	0	0.00	38	4	9.52
RFX2	0	genome.wustl.edu	37	19	6026217	6026218	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	6026217	6026218	-	T	INS	RFX2	ENST00000303657	human	ensembl	74_37	-1	known	frame_shift_ins	c.554_553	p.S185fs	0.999:1.000	NULL	pfam_RFX1_trans_act,pfam_DNA-bd_RFX	-	no_errors	RFX2	HGNC	ENSG00000087903	tier1			116	0	0.00	68	11	13.92
RFX5	0	genome.wustl.edu	37	1	151318680	151318680	+	Splice_Site	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	151318680	151318680	C	T	SNP	RFX5	ENST00000290524	human	ensembl	74_37	-1	known	splice_site	c.116+1	e1+1	1.000	-	-	-	no_errors	RFX5	HGNC	ENSG00000143390	tier1	-	-	56	0	0.00	53	13	19.70
RGPD3	0	genome.wustl.edu	37	2	107040056	107040056	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	107040056	107040056	G	A	SNP	RGPD3	ENST00000304514	human	ensembl	74_37	-1	known	missense	c.4367	p.S1456L	0.273	pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD3	HGNC	ENSG00000153165	tier1	-	-	52	0	0.00	42	11	20.75
RGS12	0	genome.wustl.edu	37	4	3344181	3344181	+	RNA	SNP	C	C	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	3344181	3344181	C	G	SNP	RGS12	ENST00000513784	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.033	-	-	-	no_errors	RGS12	HGNC	ENSG00000159788	tier1	-	-	47	0	0.00	41	7	14.58
RGS12	0	genome.wustl.edu	37	4	3432431	3432431	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	3432431	3432431	C	-	DEL	RGS12	ENST00000344733	human	ensembl	74_37	+1	known	frame_shift_del	c.3863	p.1292fs	0.000	NULL	pfam_Raf-like_ras-bd,pfam_RGS_dom,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTB/PI_dom,smart_Regulat_G_prot_signal_superfam,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTB/PI_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS12	HGNC	ENSG00000159788	tier1			36	0	0.00	27	5	15.62
RHBDD2	0	genome.wustl.edu	37	7	75512837	75512837	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	75512837	75512837	A	-	DEL	RHBDD2	ENST00000467406	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.010	-	-	-	no_errors	RHBDD2	HGNC	ENSG00000005486	tier1			19	0	0.00	12	4	25.00
RHOBTB2	0	genome.wustl.edu	37	8	22862121	22862121	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	22862121	22862121	A	G	SNP	RHOBTB2	ENST00000251822	human	ensembl	74_37	+1	known	silent	c.174	p.Q58	1.000	pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho	pfam_BTB_POZ,pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,superfamily_BTB/POZ_fold,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_BTB/POZ-like,pfscan_BTB/POZ-like,prints_Small_GTPase	-	no_errors	RHOBTB2	HGNC	ENSG00000008853	tier1	-	-	32	0	0.00	30	5	14.29
RIC3	0	genome.wustl.edu	37	11	8160039	8160039	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	8160039	8160039	A	-	DEL	RIC3	ENST00000524799	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RIC3	HGNC	ENSG00000166405	tier1			14	0	0.00	5	4	44.44
RIC3	0	genome.wustl.edu	37	11	8161539	8161539	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	8161539	8161539	A	-	DEL	RIC3	ENST00000309737	human	ensembl	74_37	-1	known	frame_shift_del	c.326	p.L109fs	1.000	NULL	NULL	-	no_errors	RIC3	HGNC	ENSG00000166405	tier1			82	0	0.00	66	20	23.26
RICTOR	0	genome.wustl.edu	37	5	38954826	38954826	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	38954826	38954826	T	-	DEL	RICTOR	ENST00000503698	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RICTOR	HGNC	ENSG00000164327	tier1			25	0	0.00	21	11	34.38
RIMBP2	0	genome.wustl.edu	37	12	130926638	130926638	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	130926638	130926638	G	A	SNP	RIMBP2	ENST00000261655	human	ensembl	74_37	-1	known	missense	c.1208	p.T403M	0.998	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	RIMBP2	HGNC	ENSG00000060709	tier1	-	-	56	0	0.00	24	10	29.41
RIMS1	0	genome.wustl.edu	37	6	72596814	72596814	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	72596814	72596814	G	A	SNP	RIMS1	ENST00000521978	human	ensembl	74_37	+1	known	missense	c.88	p.E30K	1.000	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS1	HGNC	ENSG00000079841	tier1	-	-	131	0	0.00	117	16	12.03
RIMS1	0	genome.wustl.edu	37	6	72892166	72892166	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	72892166	72892166	C	T	SNP	RIMS1	ENST00000521978	human	ensembl	74_37	+1	known	missense	c.992	p.P331L	0.888	NULL	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS1	HGNC	ENSG00000079841	tier1	-	-	43	0	0.00	45	6	11.76
RIMS1	0	genome.wustl.edu	37	6	73110999	73110999	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	73110999	73110999	A	-	DEL	RIMS1	ENST00000431478	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.049	-	-	-	no_errors	RIMS1	HGNC	ENSG00000079841	tier1			19	0	0.00	14	6	30.00
RIN1	0	genome.wustl.edu	37	11	66100117	66100117	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	66100117	66100117	G	A	SNP	RIN1	ENST00000311320	human	ensembl	74_37	-1	known	missense	c.1982	p.T661I	0.981	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc	pfam_VPS9,pfam_Ras-assoc,smart_SH2,smart_VPS9_subgr,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SH2,pfscan_VPS9	-	no_errors	RIN1	HGNC	ENSG00000174791	tier1	-	-	60	0	0.00	41	23	35.94
RIOK1	0	genome.wustl.edu	37	6	7398932	7398932	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	7398932	7398932	T	A	SNP	RIOK1	ENST00000379834	human	ensembl	74_37	+1	known	missense	c.439	p.Y147N	1.000	pirsf_Ser/Thr_kinase_Rio1	pfam_RIO-like_kinase,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_RIO_kinase,pirsf_Ser/Thr_kinase_Rio1	-	no_errors	RIOK1	HGNC	ENSG00000124784	tier1	-	-	66	0	0.00	64	8	11.11
RMDN3	0	genome.wustl.edu	37	15	41029894	41029894	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	41029894	41029894	T	-	DEL	RMDN3	ENST00000260385	human	ensembl	74_37	-1	known	frame_shift_del	c.1156	p.T386fs	1.000	NULL	NULL	-	no_errors	RMDN3	HGNC	ENSG00000137824	tier1			90	0	0.00	67	11	14.10
RN7SL860P	0	genome.wustl.edu	37	19	22784509	22784509	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	22784509	22784509	A	-	DEL	RN7SL860P	ENST00000473738	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.037	-	-	-	no_errors	RN7SL860P	HGNC	ENSG00000240713	tier1			21	0	0.00	18	11	37.93
RNASE11	0	genome.wustl.edu	37	14	21052229	21052229	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	21052229	21052229	G	-	DEL	RNASE11	ENST00000398008	human	ensembl	74_37	-1	known	frame_shift_del	c.405	p.S136fs	0.002	pfam_RNaseA_domain,superfamily_RNaseA_domain	pfam_RNaseA_domain,superfamily_RNaseA_domain	-	no_errors	RNASE11	HGNC	ENSG00000173464	tier1			58	0	0.00	36	11	23.40
RND3	0	genome.wustl.edu	37	2	151326627	151326630	+	Frame_Shift_Del	DEL	TTTA	TTTA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TTTA	TTTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	151326627	151326630	TTTA	-	DEL	RND3	ENST00000263895	human	ensembl	74_37	-1	known	frame_shift_del	c.609_606	p.N202fs	1.000:1.000:1.000:1.000	NULL	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RND3	HGNC	ENSG00000115963	tier1			44	0	0.00	32	5	13.51
RNF123	0	genome.wustl.edu	37	3	49736506	49736506	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	49736506	49736506	C	T	SNP	RNF123	ENST00000327697	human	ensembl	74_37	+1	known	silent	c.732	p.S244	0.908	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,smart_Znf_RING,pfscan_B30.2/SPRY,pfscan_Znf_RING	-	no_errors	RNF123	HGNC	ENSG00000164068	tier1	-	-	35	0	0.00	33	9	21.43
RNF123	0	genome.wustl.edu	37	3	49739823	49739823	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	49739823	49739823	C	T	SNP	RNF123	ENST00000327697	human	ensembl	74_37	+1	known	silent	c.1614	p.N538	0.995	NULL	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,smart_Znf_RING,pfscan_B30.2/SPRY,pfscan_Znf_RING	-	no_errors	RNF123	HGNC	ENSG00000164068	tier1	-	-	33	0	0.00	20	5	20.00
RNF144A	0	genome.wustl.edu	37	2	7179767	7179767	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	7179767	7179767	G	A	SNP	RNF144A	ENST00000320892	human	ensembl	74_37	+1	known	missense	c.755	p.G252D	1.000	NULL	pfam_Znf_C6HC,smart_Znf_C6HC,pfscan_Znf_RING	-	no_errors	RNF144A	HGNC	ENSG00000151692	tier1	-	-	84	0	0.00	74	7	8.64
RNF20	0	genome.wustl.edu	37	9	104309733	104309733	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	104309733	104309733	G	A	SNP	RNF20	ENST00000389120	human	ensembl	74_37	+1	known	missense	c.1025	p.R342H	1.000	superfamily_STAT_TF_coiled-coil	superfamily_STAT_TF_coiled-coil,superfamily_Prefoldin,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF20	HGNC	ENSG00000155827	tier1	-	-	43	0	0.00	22	12	35.29
RNF207	0	genome.wustl.edu	37	1	6270328	6270328	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	6270328	6270328	C	T	SNP	RNF207	ENST00000377948	human	ensembl	74_37	+1	known	silent	c.165	p.H55	0.982	NULL	NULL	-	no_errors	RNF207	HGNC	ENSG00000158286	tier1	-	-	70	0	0.00	53	4	7.02
RNF213	0	genome.wustl.edu	37	17	78367233	78367233	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	78367233	78367233	C	A	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	missense	c.15559	p.L5187I	0.477	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821	tier1	-	-	59	0	0.00	51	17	25.00
RNF215	0	genome.wustl.edu	37	22	30775768	30775768	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	30775768	30775768	T	C	SNP	RNF215	ENST00000382363	human	ensembl	74_37	-1	known	missense	c.1043	p.H348R	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF215	HGNC	ENSG00000099999	tier1	-	-	30	0	0.00	29	6	17.14
RNF220	0	genome.wustl.edu	37	1	44877906	44877906	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	44877906	44877906	G	A	SNP	RNF220	ENST00000355387	human	ensembl	74_37	+1	known	missense	c.137	p.R46Q	1.000	NULL	superfamily_Peptidase_M20_dimer,pfscan_Znf_RING	-	no_errors	RNF220	HGNC	ENSG00000187147	tier1	-	-	54	0	0.00	45	8	15.09
RNF44	0	genome.wustl.edu	37	5	175959157	175959157	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	175959157	175959157	G	A	SNP	RNF44	ENST00000274811	human	ensembl	74_37	-1	known	missense	c.145	p.R49W	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF44	HGNC	ENSG00000146083	tier1	-	-	32	0	0.00	19	8	29.63
RNFT1	0	genome.wustl.edu	37	17	58040251	58040251	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	58040251	58040251	G	A	SNP	RNFT1	ENST00000305783	human	ensembl	74_37	-1	known	silent	c.451	p.L151	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNFT1	HGNC	ENSG00000189050	tier1	-	-	32	0	0.00	17	27	61.36
ROBO1	0	genome.wustl.edu	37	3	78685185	78685185	+	Silent	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	78685185	78685185	A	C	SNP	ROBO1	ENST00000464233	human	ensembl	74_37	-1	known	silent	c.3111	p.V1037	0.991	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO1	HGNC	ENSG00000169855	tier1	-	-	80	0	0.00	72	20	21.74
ROBO1	0	genome.wustl.edu	37	3	78685252	78685252	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	78685252	78685252	C	T	SNP	ROBO1	ENST00000464233	human	ensembl	74_37	-1	known	missense	c.3044	p.C1015Y	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO1	HGNC	ENSG00000169855	tier1	-	-	53	0	0.00	37	15	28.85
ROBO4	0	genome.wustl.edu	37	11	124765468	124765468	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	124765468	124765468	G	A	SNP	ROBO4	ENST00000306534	human	ensembl	74_37	-1	known	silent	c.921	p.S307	0.969	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO4	HGNC	ENSG00000154133				21	0	0.00	11	3	21.43
ROCK1	0	genome.wustl.edu	37	18	18622641	18622641	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	18622641	18622641	A	G	SNP	ROCK1	ENST00000399799	human	ensembl	74_37	-1	known	silent	c.705	p.V235	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Rho-assoc_coiled-coil_kin,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Rho-bd_dom,pfam_HR1_rho-bd,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pirsf_Rho-assoc_coiled-coil_kin,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	ROCK1	HGNC	ENSG00000067900	tier1	-	-	84	0	0.00	59	13	18.06
ROPN1B	0	genome.wustl.edu	37	3	125691017	125691017	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	125691017	125691017	C	T	SNP	ROPN1B	ENST00000504401	human	ensembl	74_37	+1	putative	silent	c.120	p.Y40	0.224	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	-	no_errors	ROPN1B	HGNC	ENSG00000114547	tier1	-	-	43	0	0.00	54	4	6.90
ROR2	0	genome.wustl.edu	37	9	94538048	94538048	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	94538048	94538048	C	A	SNP	ROR2	ENST00000375708	human	ensembl	74_37	-1	known	missense	c.150	p.Q50H	0.013	pirsf_Tyr_kinase_rcpt_ROR	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	ROR2	HGNC	ENSG00000169071	tier1	-	-	39	0	0.00	33	4	10.81
RP1L1	0	genome.wustl.edu	37	8	10470049	10470049	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	10470049	10470049	C	T	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	missense	c.1559	p.R520H	0.154	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638	tier1	-	-	37	0	0.00	39	5	11.36
RPL22	0	genome.wustl.edu	37	1	6257785	6257785	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	6257785	6257785	T	-	DEL	RPL22	ENST00000234875	human	ensembl	74_37	-1	known	frame_shift_del	c.44	p.K15fs	1.000	pfam_Ribosomal_L22e	pfam_Ribosomal_L22e	-	no_errors	RPL22	HGNC	ENSG00000116251	tier1			49	0	0.00	43	25	36.76
RPN1	0	genome.wustl.edu	37	3	128348877	128348877	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	128348877	128348877	G	T	SNP	RPN1	ENST00000296255	human	ensembl	74_37	-1	known	missense	c.953	p.P318H	1.000	pfam_Ribophorin_I	pfam_Ribophorin_I	-	no_errors	RPN1	HGNC	ENSG00000163902	tier1	-	-	67	0	0.00	50	9	15.25
RPS6KA2	0	genome.wustl.edu	37	6	166889308	166889308	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	166889308	166889308	G	A	SNP	RPS6KA2	ENST00000366863	human	ensembl	74_37	-1	known	silent	c.465	p.C155	0.000	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	RPS6KA2	HGNC	ENSG00000071242	tier1	-	-	104	0	0.00	48	11	18.64
RPS6KA4	0	genome.wustl.edu	37	11	64126867	64126869	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	64126867	64126869	GAG	-	DEL	RPS6KA4	ENST00000334205	human	ensembl	74_37	+1	known	in_frame_del	c.73_75	p.E26in_frame_del	1.000:1.000:1.000	superfamily_Kinase-like_dom,pirsf_Ribosomal_S6_kinase_II	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	-	no_errors	RPS6KA4	HGNC	ENSG00000162302	tier1			90	0	0.00	47	19	28.79
RPTOR	0	genome.wustl.edu	37	17	78567121	78567121	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	78567121	78567121	G	A	SNP	RPTOR	ENST00000573746	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	RPTOR	HGNC	ENSG00000141564	tier1	-	-	43	0	0.00	25	9	26.47
RRAD	0	genome.wustl.edu	37	16	66957796	66957796	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	66957796	66957796	C	T	SNP	RRAD	ENST00000299759	human	ensembl	74_37	-1	known	missense	c.397	p.V133M	1.000	pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,pirsf_Small_GTPase_GEM/REM/Rad,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,pirsf_Small_GTPase_GEM/REM/Rad,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RRAD	HGNC	ENSG00000166592	tier1	-	-	42	0	0.00	24	18	42.86
RRAGD	0	genome.wustl.edu	37	6	90121614	90121614	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	90121614	90121614	G	A	SNP	RRAGD	ENST00000369415	human	ensembl	74_37	-1	known	silent	c.99	p.D33	1.000	NULL	pfam_Gtr1_RagA,pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase	-	no_errors	RRAGD	HGNC	ENSG00000025039	tier1	-	-	32	0	0.00	13	7	35.00
RRBP1	0	genome.wustl.edu	37	20	17641107	17641107	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	17641107	17641107	C	A	SNP	RRBP1	ENST00000246043	human	ensembl	74_37	-1	known	nonsense	c.46	p.G16*	1.000	NULL	pfam_Rib_rcpt_KP,superfamily_Ribosome_recyc_fac_dom	-	no_errors	RRBP1	HGNC	ENSG00000125844				60	0	0.00	52	4	7.14
RRM2B	0	genome.wustl.edu	37	8	103236304	103236304	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	103236304	103236304	G	A	SNP	RRM2B	ENST00000251810	human	ensembl	74_37	-1	known	nonsense	c.520	p.R174*	0.978	pfam_RNR_small,superfamily_Ferritin-like_SF	pfam_RNR_small,superfamily_Ferritin-like_SF	-	no_errors	RRM2B	HGNC	ENSG00000048392	tier1	-	-	48	0	0.00	51	10	16.39
RRN3P2	0	genome.wustl.edu	37	16	29110458	29110458	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	29110458	29110458	T	C	SNP	RRN3P2	ENST00000427965	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.991	-	-	-	no_errors	RRN3P2	HGNC	ENSG00000103472	tier1	-	-	76	0	0.00	113	24	17.52
RSBN1	0	genome.wustl.edu	37	1	114319836	114319836	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	114319836	114319836	G	A	SNP	RSBN1	ENST00000261441	human	ensembl	74_37	-1	known	nonsense	c.1654	p.R552*	1.000	NULL	NULL	-	no_errors	RSBN1	HGNC	ENSG00000081019	tier1	-	-	64	0	0.00	53	9	14.52
RSPH10B2	0	genome.wustl.edu	37	7	6831535	6831535	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	6831535	6831535	C	A	SNP	RSPH10B2	ENST00000297186	human	ensembl	74_37	+1	known	missense	c.2140	p.P714T	0.347	NULL	pfam_MORN,smart_MORN	-	no_errors	RSPH10B2	HGNC	ENSG00000169402	tier1	-	-	23	0	0.00	24	8	25.00
RTN3	0	genome.wustl.edu	37	11	63525656	63525656	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	63525656	63525656	A	-	DEL	RTN3	ENST00000377819	human	ensembl	74_37	+1	known	frame_shift_del	c.3082	p.K1030fs	1.000	pfscan_Reticulon	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN3	HGNC	ENSG00000133318	tier1			38	0	0.00	26	14	35.00
RTN4	0	genome.wustl.edu	37	2	55209688	55209688	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	55209688	55209688	C	T	SNP	RTN4	ENST00000337526	human	ensembl	74_37	-1	known	missense	c.3323	p.R1108H	1.000	pfam_Reticulon,pfscan_Reticulon	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN4	HGNC	ENSG00000115310	tier1	-	-	56	0	0.00	42	9	17.65
RTTN	0	genome.wustl.edu	37	18	67759942	67759942	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	67759942	67759942	G	T	SNP	RTTN	ENST00000255674	human	ensembl	74_37	-1	known	silent	c.4002	p.S1334	0.885	NULL	superfamily_ARM-type_fold	-	no_errors	RTTN	HGNC	ENSG00000176225	tier1	-	-	51	0	0.00	44	8	15.38
RTTN	0	genome.wustl.edu	37	18	67863751	67863751	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	67863751	67863751	A	-	DEL	RTTN	ENST00000255674	human	ensembl	74_37	-1	known	frame_shift_del	c.827	p.F276fs	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	RTTN	HGNC	ENSG00000176225	tier1			89	0	0.00	64	8	11.11
RXFP2	0	genome.wustl.edu	37	13	32376432	32376432	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	32376432	32376432	A	C	SNP	RXFP2	ENST00000298386	human	ensembl	74_37	+1	known	missense	c.2155	p.K719Q	0.948	NULL	pfam_GPCR_Rhodpsn,pfam_Leu-rich_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Leu-rich_rpt_typical-subtyp,pfscan_LDrepeatLR_classA_rpt,pfscan_GPCR_Rhodpsn_7TM,prints_Relaxin_rcpt,prints_GPCR_Rhodpsn,prints_Gphrmn_rcpt_fam	-	no_errors	RXFP2	HGNC	ENSG00000133105	tier1	-	-	54	0	0.00	34	13	27.66
RXRB	0	genome.wustl.edu	37	6	33164130	33164130	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	33164130	33164130	G	-	DEL	RXRB	ENST00000413614	human	ensembl	74_37	-1	known	frame_shift_del	c.786	p.S263fs	0.000	NULL	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	RXRB	HGNC	ENSG00000204231	tier1			90	0	0.00	51	28	35.44
RYR1	0	genome.wustl.edu	37	19	39038962	39038962	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	39038962	39038962	G	A	SNP	RYR1	ENST00000359596	human	ensembl	74_37	+1	known	missense	c.12184	p.D4062N	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_MG_RAP_rcpt_1,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_MIR_motif	-	no_errors	RYR1	HGNC	ENSG00000196218	tier1	-	-	73	0	0.00	46	14	23.33
RYR2	0	genome.wustl.edu	37	1	237993779	237993779	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	237993779	237993779	T	-	DEL	RYR2	ENST00000462585	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1			99	0	0.00	65	19	22.62
RYR3	0	genome.wustl.edu	37	15	34077887	34077887	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	34077887	34077887	A	G	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.9293	p.E3098G	1.000	superfamily_ARM-type_fold	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	55	0	0.00	24	15	38.46
RYR3	0	genome.wustl.edu	37	15	33954455	33954455	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	33954455	33954455	G	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.4724	p.R1575L	1.000	NULL	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838				32	0	0.00	23	2	8.00
S1PR2	0	genome.wustl.edu	37	19	10334909	10334909	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	10334909	10334909	C	T	SNP	S1PR2	ENST00000590320	human	ensembl	74_37	-1	known	missense	c.673	p.A225T	0.174	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_EDG5_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_EDG5_rcpt,prints_GPCR_Rhodpsn,prints_S1P_rcpt,prints_Melcrt_ACTH_rcpt	-	no_errors	S1PR2	HGNC	ENSG00000267534				29	0	0.00	8	3	27.27
S1PR2	0	genome.wustl.edu	37	19	10335511	10335511	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	10335511	10335511	G	A	SNP	S1PR2	ENST00000590320	human	ensembl	74_37	-1	known	missense	c.71	p.T24M	0.757	prints_EDG5_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_EDG5_rcpt,prints_GPCR_Rhodpsn,prints_S1P_rcpt,prints_Melcrt_ACTH_rcpt	-	no_errors	S1PR2	HGNC	ENSG00000267534				61	0	0.00	44	5	10.20
S1PR5	0	genome.wustl.edu	37	19	10625120	10625120	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	10625120	10625120	C	T	SNP	S1PR5	ENST00000333430	human	ensembl	74_37	-1	known	missense	c.568	p.A190T	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_EDG8_S1P_rcpt,prints_S1P_rcpt,prints_GPCR_Rhodpsn	-	no_errors	S1PR5	HGNC	ENSG00000180739	tier1	-	-	60	0	0.00	55	10	15.38
SACS	0	genome.wustl.edu	37	13	23909409	23909409	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	23909409	23909409	C	G	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.8606	p.C2869S	1.000	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	tier1	-	-	27	0	0.00	22	8	26.67
SAE1	0	genome.wustl.edu	37	19	47634198	47634200	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	47634198	47634200	AGG	-	DEL	SAE1	ENST00000270225	human	ensembl	74_37	+1	known	in_frame_del	c.11_13	p.E6in_frame_del	1.000:1.000:1.000	NULL	pfam_ThiF_NAD_FAD-bd,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like	-	no_errors	SAE1	HGNC	ENSG00000142230	tier1			142	0	0.00	124	34	21.52
SAFB	0	genome.wustl.edu	37	19	5661791	5661791	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	5661791	5661791	G	A	SNP	SAFB	ENST00000588852	human	ensembl	74_37	+1	known	missense	c.2125	p.A709T	0.557	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SAFB	HGNC	ENSG00000160633	tier1	-	-	76	0	0.00	58	7	10.77
SAMD1	0	genome.wustl.edu	37	19	14199586	14199586	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	14199586	14199586	C	T	SNP	SAMD1	ENST00000533683	human	ensembl	74_37	-1	novel	missense	c.1037	p.R346H	1.000	superfamily_SAM/pointed	pfam_SAM_type1,pfam_Pointed_dom,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD1	HGNC	ENSG00000141858	tier1	-	-	68	0	0.00	56	4	6.67
SAR1A	0	genome.wustl.edu	37	10	71921648	71921648	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	71921648	71921648	G	T	SNP	SAR1A	ENST00000373238	human	ensembl	74_37	-1	known	silent	c.24	p.I8	1.000	smart_Small_GTPase_ARF	pfam_Small_GTPase_ARF/SAR,pfam_SRP_receptor_beta_su,pfam_Small_GTPase,pfam_Gprotein_alpha_su,pfam_MIRO-like,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_SAR1,prints_Small_GTPase_ARF/SAR,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	SAR1A	HGNC	ENSG00000079332	tier1	-	-	30	0	0.00	27	9	25.00
SASH1	0	genome.wustl.edu	37	6	148711274	148711274	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	148711274	148711274	G	A	SNP	SASH1	ENST00000367467	human	ensembl	74_37	+1	known	missense	c.161	p.G54D	1.000	NULL	pfam_rSAM/SH3_domain-containing,pfam_SAM_2,pfam_SAM_type1,pfam_SH3_2,superfamily_SAM/pointed,superfamily_SH3_domain,smart_SH3_domain,smart_SAM,pfscan_SAM	-	no_errors	SASH1	HGNC	ENSG00000111961	tier1	-	-	66	0	0.00	48	9	15.79
SASH1	0	genome.wustl.edu	37	6	148865156	148865156	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	148865156	148865156	G	A	SNP	SASH1	ENST00000367467	human	ensembl	74_37	+1	known	silent	c.2550	p.E850	0.000	NULL	pfam_rSAM/SH3_domain-containing,pfam_SAM_2,pfam_SAM_type1,pfam_SH3_2,superfamily_SAM/pointed,superfamily_SH3_domain,smart_SH3_domain,smart_SAM,pfscan_SAM	-	no_errors	SASH1	HGNC	ENSG00000111961				40	0	0.00	25	3	10.71
SATL1	0	genome.wustl.edu	37	X	84363925	84363925	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	84363925	84363925	G	T	SNP	SATL1	ENST00000509231	human	ensembl	74_37	-1	known	missense	c.50	p.A17E	0.000	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	SATL1	HGNC	ENSG00000184788	tier1	-	-	87	0	0.00	75	4	5.06
SBNO1	0	genome.wustl.edu	37	12	123798226	123798226	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	123798226	123798226	A	G	SNP	SBNO1	ENST00000420886	human	ensembl	74_37	-1	known	missense	c.3161	p.V1054A	1.000	NULL	pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Prismane-like	-	no_errors	SBNO1	HGNC	ENSG00000139697				35	0	0.00	30	4	11.76
SCAP	0	genome.wustl.edu	37	3	47460943	47460943	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	47460943	47460943	C	A	SNP	SCAP	ENST00000265565	human	ensembl	74_37	-1	known	missense	c.1815	p.E605D	0.985	NULL	pfam_Patched,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_SSD,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SCAP	HGNC	ENSG00000114650	tier1	-	-	44	0	0.00	32	5	13.51
SCARNA18	0	genome.wustl.edu	37	5	82360128	82360128	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	82360128	82360128	G	T	SNP	SCARNA18	ENST00000459004	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SCARNA18	HGNC	ENSG00000238835	tier1	-	-	29	0	0.00	34	4	10.53
SCD5	0	genome.wustl.edu	37	4	83582061	83582061	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	83582061	83582061	G	T	SNP	SCD5	ENST00000273908	human	ensembl	74_37	-1	known	missense	c.739	p.R247S	0.000	NULL	pfam_Fatty_acid_desaturase-1,prints_Fatty_acid_desaturase-1_core	-	no_errors	SCD5	HGNC	ENSG00000145284	tier1	-	-	93	0	0.00	42	20	32.26
SCD5	0	genome.wustl.edu	37	4	83601945	83601945	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	83601945	83601945	G	A	SNP	SCD5	ENST00000319540	human	ensembl	74_37	-1	known	missense	c.484	p.R162C	1.000	pfam_Fatty_acid_desaturase-1	pfam_Fatty_acid_desaturase-1,prints_Fatty_acid_desaturase-1_core	-	no_errors	SCD5	HGNC	ENSG00000145284				38	0	0.00	28	3	9.68
SCFD1	0	genome.wustl.edu	37	14	31091582	31091582	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	31091582	31091582	C	T	SNP	SCFD1	ENST00000458591	human	ensembl	74_37	+1	known	missense	c.38	p.A13V	0.068	superfamily_Sec1-like	pfam_Sec1-like,superfamily_Sec1-like	-	no_errors	SCFD1	HGNC	ENSG00000092108	tier1	-	-	91	0	0.00	78	11	12.36
SCFD1	0	genome.wustl.edu	37	14	31107414	31107414	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	31107414	31107414	T	C	SNP	SCFD1	ENST00000458591	human	ensembl	74_37	+1	known	silent	c.396	p.N132	1.000	pfam_Sec1-like,superfamily_Sec1-like	pfam_Sec1-like,superfamily_Sec1-like	-	no_errors	SCFD1	HGNC	ENSG00000092108	tier1	-	-	53	0	0.00	36	12	25.00
SCGB2B2	0	genome.wustl.edu	37	19	35084404	35084404	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	35084404	35084404	C	T	SNP	SCGB2B2	ENST00000595326	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SCGB2B2	HGNC	ENSG00000205209	tier1	-	-	20	0	0.00	8	4	33.33
SCLY	0	genome.wustl.edu	37	2	238991922	238991922	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	238991922	238991922	C	T	SNP	SCLY	ENST00000254663	human	ensembl	74_37	+1	known	nonsense	c.835	p.R279*	0.911	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,pirsf_Cysteine_dSase_NifS	pfam_Aminotrans_V/Cys_dSase,superfamily_PyrdxlP-dep_Trfase,pirsf_Cysteine_dSase_NifS	-	no_errors	SCLY	HGNC	ENSG00000132330	tier1	-	-	67	0	0.00	49	6	10.91
SCN2A	0	genome.wustl.edu	37	2	166171983	166171983	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	166171983	166171983	G	A	SNP	SCN2A	ENST00000283256	human	ensembl	74_37	+1	known	silent	c.1386	p.A462	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531	tier1	rs145912536	-	69	0	0.00	34	8	19.05
SCN3A	0	genome.wustl.edu	37	2	165948847	165948847	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	165948847	165948847	A	G	SNP	SCN3A	ENST00000283254	human	ensembl	74_37	-1	known	missense	c.4724	p.L1575P	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN3A	HGNC	ENSG00000153253	tier1	-	-	63	0	0.00	78	8	9.30
SCN3B	0	genome.wustl.edu	37	11	123516402	123516402	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	123516402	123516402	C	A	SNP	SCN3B	ENST00000299333	human	ensembl	74_37	-1	known	missense	c.112	p.G38C	1.000	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	SCN3B	HGNC	ENSG00000166257	tier1	-	-	31	0	0.00	22	6	21.43
SCN4A	0	genome.wustl.edu	37	17	62045456	62045456	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	62045456	62045456	G	A	SNP	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	silent	c.963	p.N321	0.820	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN4A	HGNC	ENSG00000007314	tier1	-	-	59	0	0.00	23	35	60.34
SCN4A	0	genome.wustl.edu	37	17	62018159	62018159	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	62018159	62018159	C	T	SNP	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	missense	c.5483	p.R1828H	0.951	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN4A	HGNC	ENSG00000007314				43	0	0.00	32	5	13.51
SCN5A	0	genome.wustl.edu	37	3	38622707	38622707	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	38622707	38622707	G	A	SNP	SCN5A	ENST00000333535	human	ensembl	74_37	-1	known	silent	c.2943	p.C981	1.000	pfam_Na_trans_assoc,prints_Na_channel_a5su	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,prints_Na_channel_a5su,prints_Na_channel_asu	-	no_errors	SCN5A	HGNC	ENSG00000183873	tier1	-	-	37	0	0.00	25	7	21.88
SCN7A	0	genome.wustl.edu	37	2	167279923	167279924	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	167279923	167279924	AT	-	DEL	SCN7A	ENST00000409855	human	ensembl	74_37	-1	known	frame_shift_del	c.2873_2872	p.M958fs	1.000:1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN7A	HGNC	ENSG00000136546	tier1			32	0	0.00	36	2	5.26
SCN9A	0	genome.wustl.edu	37	2	167055647	167055647	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	167055647	167055647	G	A	SNP	SCN9A	ENST00000303354	human	ensembl	74_37	-1	known	silent	c.5505	p.D1835	1.000	NULL	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN9A	HGNC	ENSG00000169432	tier1	-	-	88	0	0.00	64	20	23.81
SCN9A	0	genome.wustl.edu	37	2	167134703	167134703	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	167134703	167134703	C	T	SNP	SCN9A	ENST00000303354	human	ensembl	74_37	-1	known	missense	c.2467	p.E823K	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN9A	HGNC	ENSG00000169432				63	0	0.00	50	6	10.71
SCNN1D	0	genome.wustl.edu	37	1	1222275	1222275	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	1222275	1222275	C	-	DEL	SCNN1D	ENST00000379116	human	ensembl	74_37	+1	known	frame_shift_del	c.1039	p.F349fs	0.000	pfam_Na+channel_ASC,tigrfam_EnaC	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	-	no_errors	SCNN1D	HGNC	ENSG00000162572	tier1			78	0	0.00	62	15	19.48
SCRIB	0	genome.wustl.edu	37	8	144873383	144873383	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	144873383	144873383	G	T	SNP	SCRIB	ENST00000320476	human	ensembl	74_37	-1	known	missense	c.4843	p.R1615S	0.993	NULL	pfam_PDZ,pfam_Leu-rich_rpt,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	SCRIB	HGNC	ENSG00000180900				31	0	0.00	25	8	24.24
SCRN2	0	genome.wustl.edu	37	17	45915667	45915667	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	45915667	45915667	T	C	SNP	SCRN2	ENST00000290216	human	ensembl	74_37	-1	known	missense	c.1088	p.Q363R	1.000	NULL	pfam_Peptidase_C69,pfam_Pept_C45_AAT	-	no_errors	SCRN2	HGNC	ENSG00000141295	tier1	-	-	64	0	0.00	45	6	11.76
SCUBE3	0	genome.wustl.edu	37	6	35205687	35205687	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	35205687	35205687	G	A	SNP	SCUBE3	ENST00000394681	human	ensembl	74_37	+1	known	missense	c.769	p.A257T	1.000	smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,prints_Thrombomodulin	pfam_EGF-like_Ca-bd_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom,prints_Thrombomodulin	-	no_errors	SCUBE3	HGNC	ENSG00000146197	tier1	-	-	86	0	0.00	65	11	14.47
SCUBE3	0	genome.wustl.edu	37	6	35213121	35213121	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	35213121	35213121	C	T	SNP	SCUBE3	ENST00000394681	human	ensembl	74_37	+1	known	missense	c.2566	p.R856C	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_EGF-like_Ca-bd_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom,prints_Thrombomodulin	-	no_errors	SCUBE3	HGNC	ENSG00000146197	tier1	-	-	77	0	0.00	54	29	34.94
SDC1	0	genome.wustl.edu	37	2	20402090	20402090	+	RNA	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	20402090	20402090	C	-	DEL	SDC1	ENST00000482879	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SDC1	HGNC	ENSG00000115884	tier1			47	0	0.00	33	5	13.16
SDC3	0	genome.wustl.edu	37	1	31351475	31351475	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	31351475	31351475	G	A	SNP	SDC3	ENST00000339394	human	ensembl	74_37	-1	known	missense	c.251	p.S84L	1.000	pfam_Syndecan/Neurexin_dom	pfam_Syndecan/Neurexin_dom,smart_Neurexin-like	-	no_errors	SDC3	HGNC	ENSG00000162512	tier1	-	-	42	0	0.00	27	11	28.95
SDK2	0	genome.wustl.edu	37	17	71344794	71344794	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	71344794	71344794	T	C	SNP	SDK2	ENST00000392650	human	ensembl	74_37	-1	known	missense	c.6109	p.I2037V	1.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK2	HGNC	ENSG00000069188	tier1	-	-	45	0	0.00	34	8	19.05
SEC24A	0	genome.wustl.edu	37	5	134050782	134050782	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	134050782	134050782	C	T	SNP	SEC24A	ENST00000398844	human	ensembl	74_37	+1	known	silent	c.2796	p.N932	0.994	pfam_Sec23/24_helical_dom,superfamily_Sec23/24_helical_dom	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom	-	no_errors	SEC24A	HGNC	ENSG00000113615	tier1	-	-	46	0	0.00	58	8	12.12
SEC31B	0	genome.wustl.edu	37	10	102256019	102256019	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	102256019	102256019	G	A	SNP	SEC31B	ENST00000370345	human	ensembl	74_37	-1	known	missense	c.2306	p.A769V	0.462	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SEC31B	HGNC	ENSG00000075826	tier1	-	-	41	0	0.00	47	7	12.96
SEC61A1	0	genome.wustl.edu	37	3	127774388	127774388	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	127774388	127774388	C	T	SNP	SEC61A1	ENST00000243253	human	ensembl	74_37	+1	known	silent	c.105	p.T35	0.169	superfamily_SecY_su_dom,pirsf_SecY/SEC61-alpha,tigrfam_SecY/SEC61-alpha	pfam_SecY/SEC61-alpha,pfam_Translocon_Sec61/SecY_plug_dom,superfamily_SecY_su_dom,pirsf_SecY/SEC61-alpha,tigrfam_SecY/SEC61-alpha	-	no_errors	SEC61A1	HGNC	ENSG00000058262	tier1	-	-	78	0	0.00	76	8	9.52
SEL1L3	0	genome.wustl.edu	37	4	25831751	25831751	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	25831751	25831751	C	A	SNP	SEL1L3	ENST00000399878	human	ensembl	74_37	-1	known	missense	c.1126	p.D376Y	0.997	superfamily_ConA-like_lec_gl_sf	pfam_Sel1-like,superfamily_ConA-like_lec_gl_sf,smart_Sel1-like	-	no_errors	SEL1L3	HGNC	ENSG00000091490	tier1	-	-	100	0	0.00	71	4	5.33
SEMA4B	0	genome.wustl.edu	37	15	90771824	90771824	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	90771824	90771824	C	-	DEL	SEMA4B	ENST00000332496	human	ensembl	74_37	+1	known	frame_shift_del	c.2463	p.R823fs	1.000	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA4B	HGNC	ENSG00000185033	tier1			57	0	0.00	51	21	29.17
SEMA4D	0	genome.wustl.edu	37	9	91994102	91994102	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	91994102	91994102	C	T	SNP	SEMA4D	ENST00000356444	human	ensembl	74_37	-1	known	silent	c.2106	p.A702	0.000	NULL	pfam_Semap_dom,pfam_Plexin_repeat,pfam_Immunoglobulin,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,smart_Ig_sub2,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA4D	HGNC	ENSG00000187764	tier1	-	-	49	0	0.00	45	11	19.30
SEMA6A	0	genome.wustl.edu	37	5	115831945	115831945	+	Splice_Site	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	115831945	115831945	A	G	SNP	SEMA6A	ENST00000257414	human	ensembl	74_37	-1	known	splice_site	c.342+2	e4+2	1.000	-	-	-	no_errors	SEMA6A	HGNC	ENSG00000092421	tier1	-	-	78	0	0.00	59	9	13.04
SEMA6C	0	genome.wustl.edu	37	1	151106894	151106894	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	151106894	151106894	G	-	DEL	SEMA6C	ENST00000368913	human	ensembl	74_37	-1	known	frame_shift_del	c.1742	p.P581fs	0.334	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,pfscan_Semap_dom	-	no_errors	SEMA6C	HGNC	ENSG00000143434	tier1			40	0	0.00	31	8	20.51
SEPN1	0	genome.wustl.edu	37	1	26136236	26136236	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	26136236	26136236	A	G	SNP	SEPN1	ENST00000354177	human	ensembl	74_37	+1	known	missense	c.833	p.Q278R	1.000	NULL	pfscan_EF_hand_dom	-	no_errors	SEPN1	HGNC	ENSG00000162430	tier1	-	-	47	0	0.00	46	8	14.81
SERF2	0	genome.wustl.edu	37	15	44086154	44086154	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	44086154	44086154	G	A	SNP	SERF2	ENST00000409960	human	ensembl	74_37	+1	putative	missense	c.497	p.G166D	1.000	NULL	pfam_Uncharacterised_SERF	-	no_errors	SERF2	HGNC	ENSG00000140264				59	0	0.00	39	4	9.30
SERPINA12	0	genome.wustl.edu	37	14	94956095	94956095	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	94956095	94956095	G	A	SNP	SERPINA12	ENST00000341228	human	ensembl	74_37	-1	known	silent	c.915	p.D305	0.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA12	HGNC	ENSG00000165953	tier1	-	-	47	0	0.00	35	16	31.37
SERPINB9	0	genome.wustl.edu	37	6	2892189	2892189	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	2892189	2892189	C	T	SNP	SERPINB9	ENST00000380698	human	ensembl	74_37	-1	known	missense	c.601	p.E201K	0.931	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom,prints_Serpin_B9/Maspin	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom,prints_Serpin_B9/Maspin	-	no_errors	SERPINB9	HGNC	ENSG00000170542				38	0	0.00	25	3	10.71
SERPINF1	0	genome.wustl.edu	37	17	1674430	1674431	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	1674430	1674431	-	C	INS	SERPINF1	ENST00000254722	human	ensembl	74_37	+1	known	frame_shift_ins	c.391_392	p.Q133fs	0.614:0.627	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINF1	HGNC	ENSG00000132386	tier1			52	0	0.00	40	14	25.93
SERTAD3	0	genome.wustl.edu	37	19	40946794	40946796	+	RNA	DEL	AAA	AAA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AAA	AAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	40946794	40946796	AAA	-	DEL	SERTAD3	ENST00000601217	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.794:0.788:0.768	-	-	-	no_errors	SERTAD3	HGNC	ENSG00000167565	tier1			186	0	0.00	153	16	9.47
SETBP1	0	genome.wustl.edu	37	18	42532404	42532404	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	42532404	42532404	T	-	DEL	SETBP1	ENST00000282030	human	ensembl	74_37	+1	known	frame_shift_del	c.3099	p.L1035fs	1.000	NULL	smart_AT_hook_DNA-bd_motif	-	no_errors	SETBP1	HGNC	ENSG00000152217	tier1			69	0	0.00	43	13	23.21
SETD1A	0	genome.wustl.edu	37	16	30975958	30975958	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	30975958	30975958	C	T	SNP	SETD1A	ENST00000262519	human	ensembl	74_37	+1	known	missense	c.895	p.R299W	1.000	NULL	pfam_COMPASS_Set1_N-SET,pfam_SET_dom,pfam_RRM_dom,smart_RRM_dom,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_RRM_dom	-	no_errors	SETD1A	HGNC	ENSG00000099381	tier1	-	-	53	0	0.00	34	18	34.62
SETD1B	0	genome.wustl.edu	37	12	122242658	122242658	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	122242658	122242658	C	-	DEL	SETD1B	ENST00000267197	human	ensembl	74_37	+1	known	frame_shift_del	c.15	p.H8fs	1.000	NULL	pfam_COMPASS_Set1_N-SET,pfam_SET_dom,pfam_RRM_dom,smart_RRM_dom,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_RRM_dom	-	no_errors	SETD1B	HGNC	ENSG00000139718	tier1			49	0	0.00	19	18	48.65
SETD1B	0	genome.wustl.edu	37	12	122252481	122252481	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	122252481	122252481	C	T	SNP	SETD1B	ENST00000267197	human	ensembl	74_37	+1	known	missense	c.2360	p.T787M	0.997	NULL	pfam_COMPASS_Set1_N-SET,pfam_SET_dom,pfam_RRM_dom,smart_RRM_dom,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_RRM_dom	-	no_errors	SETD1B	HGNC	ENSG00000139718				9	0	0.00	8	4	33.33
SETD6	0	genome.wustl.edu	37	16	58550438	58550440	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	58550438	58550440	AGA	-	DEL	SETD6	ENST00000219315	human	ensembl	74_37	+1	known	in_frame_del	c.533_535	p.K179in_frame_del	1.000:0.998:1.000	pfam_SET_dom,pirsf_RuBisCo-cyt_methylase	pfam_SET_dom,pfam_Rubisco_LSMT_subst-bd,superfamily_Rubisco_LSMT_subst-bd,pirsf_RuBisCo-cyt_methylase	-	no_errors	SETD6	HGNC	ENSG00000103037	tier1			61	0	0.00	32	9	21.95
SETDB1	0	genome.wustl.edu	37	1	150936218	150936218	+	Splice_Site	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	150936218	150936218	G	A	SNP	SETDB1	ENST00000271640	human	ensembl	74_37	+1	known	splice_site	c.3669+1	e19+1	1.000	-	-	-	no_errors	SETDB1	HGNC	ENSG00000143379	tier1	-	-	44	0	0.00	36	9	20.00
SEZ6L2	0	genome.wustl.edu	37	16	29906705	29906706	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	29906705	29906706	-	G	INS	SEZ6L2	ENST00000308713	human	ensembl	74_37	-1	known	frame_shift_ins	c.728_727	p.R243fs	1.000:1.000	superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Sushi_SCR_CCP,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L2	HGNC	ENSG00000174938	tier1			166	0	0.00	122	26	17.57
SF3B2	0	genome.wustl.edu	37	11	65827281	65827281	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	65827281	65827281	T	C	SNP	SF3B2	ENST00000322535	human	ensembl	74_37	+1	known	missense	c.1430	p.M477T	1.000	pfam_DUF382	pfam_DUF382,pfam_PSP,pfam_SAP_dom,smart_SAP_dom,smart_PSP,pfscan_SAP_dom	-	no_errors	SF3B2	HGNC	ENSG00000087365	tier1	-	-	34	0	0.00	36	7	16.28
SFI1	0	genome.wustl.edu	37	22	32014440	32014440	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	32014440	32014440	G	-	DEL	SFI1	ENST00000474741	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SFI1	HGNC	ENSG00000198089	tier1			52	0	0.00	27	6	18.18
SFTPA2	0	genome.wustl.edu	37	10	81317336	81317336	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	81317336	81317336	T	C	SNP	SFTPA2	ENST00000372325	human	ensembl	74_37	-1	known	missense	c.376	p.S126G	0.013	smart_C-type_lectin	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	SFTPA2	HGNC	ENSG00000185303	tier1	-	-	43	0	0.00	29	7	19.44
SGSM2	0	genome.wustl.edu	37	17	2268625	2268625	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	2268625	2268625	G	A	SNP	SGSM2	ENST00000268989	human	ensembl	74_37	+1	known	silent	c.1278	p.R426	1.000	NULL	pfam_Run,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Run,smart_Rab-GTPase-TBC_dom,pfscan_Run,pfscan_Rab-GTPase-TBC_dom	-	no_errors	SGSM2	HGNC	ENSG00000141258	tier1	-	-	66	0	0.00	51	5	8.93
SH3BGR	0	genome.wustl.edu	37	21	40871812	40871812	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	40871812	40871812	G	T	SNP	SH3BGR	ENST00000333634	human	ensembl	74_37	+1	known	missense	c.565	p.G189C	0.051	NULL	pfam_Glut_rich_SH3-bd,superfamily_Thioredoxin-like_fold	-	no_errors	SH3BGR	HGNC	ENSG00000185437	tier1	-	-	90	0	0.00	65	11	14.29
SH3BP4	0	genome.wustl.edu	37	2	235950921	235950921	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	235950921	235950921	C	T	SNP	SH3BP4	ENST00000344528	human	ensembl	74_37	+1	known	missense	c.1508	p.T503M	0.998	NULL	pfam_SH3_2,pfam_SH3_domain,pfam_ZU5,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	SH3BP4	HGNC	ENSG00000130147	tier1	-	-	24	0	0.00	12	6	33.33
SH3BP5L	0	genome.wustl.edu	37	1	249106200	249106200	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	249106200	249106200	C	T	SNP	SH3BP5L	ENST00000366472	human	ensembl	74_37	-1	known	missense	c.1081	p.V361I	0.166	NULL	pfam_SH3-bd_5	-	no_errors	SH3BP5L	HGNC	ENSG00000175137				20	0	0.00	13	3	18.75
SH3GL1	0	genome.wustl.edu	37	19	4361753	4361753	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	4361753	4361753	G	A	SNP	SH3GL1	ENST00000269886	human	ensembl	74_37	-1	known	silent	c.951	p.F317	0.995	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	pfam_BAR_dom,pfam_SH3_domain,pfam_BAR_dom-cont,pfam_SH3_2,superfamily_SH3_domain,smart_BAR_dom,smart_SH3_domain,pfscan_BAR_dom,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SH3GL1	HGNC	ENSG00000141985				67	0	0.00	41	4	8.89
SH3KBP1	0	genome.wustl.edu	37	X	19560215	19560215	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	19560215	19560215	G	-	DEL	SH3KBP1	ENST00000397821	human	ensembl	74_37	-1	known	frame_shift_del	c.1720	p.L574fs	0.002	NULL	pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_p67phox,prints_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SH3KBP1	HGNC	ENSG00000147010	tier1			84	0	0.00	55	7	11.29
SH3PXD2A	0	genome.wustl.edu	37	10	105362131	105362131	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	105362131	105362131	G	0	DEL	SH3PXD2A	ENST00000369774	human	ensembl	74_37	-1	known	frame_shift_del	c.2844	p.I949fs	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SH3PXD2A	HGNC	ENSG00000107957				9	0	0.00	10	5	33.33
SH3TC2	0	genome.wustl.edu	37	5	148427444	148427444	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	148427444	148427444	T	C	SNP	SH3TC2	ENST00000515425	human	ensembl	74_37	-1	known	missense	c.260	p.E87G	0.996	NULL	pfam_SH3_domain,pfam_TPR_1,superfamily_SH3_domain,smart_SH3_domain,smart_TPR_repeat,pfscan_SH3_domain	-	no_errors	SH3TC2	HGNC	ENSG00000169247	tier1	-	-	43	0	0.00	20	5	20.00
SHC1	0	genome.wustl.edu	37	1	154935863	154935863	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	154935863	154935863	G	-	DEL	SHC1	ENST00000490667	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SHC1	HGNC	ENSG00000160691	tier1			107	0	0.00	70	38	35.19
SHCBP1L	0	genome.wustl.edu	37	1	182909500	182909500	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	182909500	182909500	T	A	SNP	SHCBP1L	ENST00000367547	human	ensembl	74_37	-1	known	missense	c.734	p.D245V	0.003	NULL	superfamily_Pectin_lyase_fold/virulence,smart_Carb-bd_sugar_hydrolysis-dom,smart_PbH1	-	no_errors	SHCBP1L	HGNC	ENSG00000157060	tier1	-	-	60	0	0.00	41	6	12.77
SHPK	0	genome.wustl.edu	37	17	3513905	3513905	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	3513905	3513905	G	A	SNP	SHPK	ENST00000225519	human	ensembl	74_37	-1	known	silent	c.1386	p.V462	0.027	NULL	pfam_Carb_kinase_FGGY_N	-	no_errors	SHPK	HGNC	ENSG00000197417	tier1	-	-	16	0	0.00	6	7	53.85
SIDT1	0	genome.wustl.edu	37	3	113322843	113322843	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	113322843	113322843	C	T	SNP	SIDT1	ENST00000393830	human	ensembl	74_37	+1	known	missense	c.1300	p.R434W	1.000	NULL	NULL	-	no_errors	SIDT1	HGNC	ENSG00000072858	tier1	-	-	69	0	0.00	46	13	22.03
SIK1	0	genome.wustl.edu	37	21	44837638	44837638	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	44837638	44837638	C	T	SNP	SIK1	ENST00000270162	human	ensembl	74_37	-1	known	silent	c.1761	p.R587	0.975	pirsf_Ser/Thr_kinase_SIK1/2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_SIK1/2,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	SIK1	HGNC	ENSG00000142178	tier1	-	-	59	0	0.00	68	6	8.11
SIPA1L2	0	genome.wustl.edu	37	1	232607232	232607232	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	232607232	232607232	C	T	SNP	SIPA1L2	ENST00000262861	human	ensembl	74_37	-1	known	missense	c.2128	p.V710I	1.000	pfam_Rap_GAP_dom,pfscan_Rap_GAP_dom	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L2	HGNC	ENSG00000116991	tier1	-	-	67	0	0.00	42	21	33.33
SIPA1L3	0	genome.wustl.edu	37	19	38573645	38573645	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	38573645	38573645	G	T	SNP	SIPA1L3	ENST00000222345	human	ensembl	74_37	+1	known	missense	c.1440	p.K480N	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L3	HGNC	ENSG00000105738	tier1	-	-	71	0	0.00	38	8	17.39
SLC15A1	0	genome.wustl.edu	37	13	99362008	99362008	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	99362008	99362008	G	T	SNP	SLC15A1	ENST00000376503	human	ensembl	74_37	-1	known	silent	c.966	p.P322	0.046	pfam_POT_fam,superfamily_MFS_dom_general_subst_transpt,tigrfam_Oligopep_transport	pfam_POT_fam,superfamily_MFS_dom_general_subst_transpt,tigrfam_Oligopep_transport	-	no_errors	SLC15A1	HGNC	ENSG00000088386	tier1	-	-	58	0	0.00	47	4	7.84
SLC16A14	0	genome.wustl.edu	37	2	230902154	230902154	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	230902154	230902154	G	A	SNP	SLC16A14	ENST00000295190	human	ensembl	74_37	-1	known	missense	c.1475	p.P492L	0.863	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC16A14	HGNC	ENSG00000163053	tier1	-	-	51	0	0.00	30	6	16.67
SLC18A3	0	genome.wustl.edu	37	10	50819743	50819743	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	50819743	50819743	G	A	SNP	SLC18A3	ENST00000374115	human	ensembl	74_37	+1	known	silent	c.957	p.T319	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC18A3	HGNC	ENSG00000187714	tier1	-	-	19	0	0.00	22	6	21.43
SLC19A1	0	genome.wustl.edu	37	21	46952005	46952005	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	46952005	46952005	C	-	DEL	SLC19A1	ENST00000311124	human	ensembl	74_37	-1	known	frame_shift_del	c.247	p.V83fs	0.014	pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pirsf_Folate_carrier,tigrfam_Folate_carrier	pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pirsf_Folate_carrier,tigrfam_Folate_carrier	-	no_errors	SLC19A1	HGNC	ENSG00000173638	tier1			35	0	0.00	29	7	19.44
SLC1A6	0	genome.wustl.edu	37	19	15067364	15067364	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	15067364	15067364	C	T	SNP	SLC1A6	ENST00000221742	human	ensembl	74_37	-1	known	missense	c.1093	p.V365I	0.984	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A6	HGNC	ENSG00000105143	tier1	-	-	70	0	0.00	40	20	33.33
SLC25A14	0	genome.wustl.edu	37	X	129492768	129492768	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	129492768	129492768	T	-	DEL	SLC25A14	ENST00000464184	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC25A14	HGNC	ENSG00000102078	tier1			33	0	0.00	19	4	17.39
SLC25A16	0	genome.wustl.edu	37	10	70246947	70246947	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	70246947	70246947	G	A	SNP	SLC25A16	ENST00000609923	human	ensembl	74_37	-1	known	missense	c.796	p.R266W	0.999	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Graves_DC,prints_Mit_carrier	-	no_errors	SLC25A16	HGNC	ENSG00000122912	tier1	-	-	55	0	0.00	34	14	28.00
SLC25A25	0	genome.wustl.edu	37	9	130854349	130854349	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	130854349	130854349	C	A	SNP	SLC25A25	ENST00000373066	human	ensembl	74_37	+1	known	missense	c.200	p.P67H	1.000	NULL	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier,prints_Graves_DC	-	no_errors	SLC25A25	HGNC	ENSG00000148339	tier1	-	-	68	0	0.00	39	14	26.42
SLC26A1	0	genome.wustl.edu	37	4	985263	985263	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	985263	985263	G	A	SNP	SLC26A1	ENST00000361661	human	ensembl	74_37	-1	known	silent	c.229	p.L77	0.240	tigrfam_SulP_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom,tigrfam_SulP_transpt	-	no_errors	SLC26A1	HGNC	ENSG00000145217	tier1	-	-	49	0	0.00	30	5	14.29
SLC26A7	0	genome.wustl.edu	37	8	92352747	92352747	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	92352747	92352747	A	-	DEL	SLC26A7	ENST00000309536	human	ensembl	74_37	+1	known	frame_shift_del	c.994	p.K333fs	1.000	pfam_Sulph_transpt	pfam_Sulph_transpt,pfam_STAS_dom,superfamily_STAS_dom,pfscan_STAS_dom	-	no_errors	SLC26A7	HGNC	ENSG00000147606	tier1			59	0	0.00	64	10	13.51
SLC28A3	0	genome.wustl.edu	37	9	86955495	86955495	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	86955495	86955495	G	T	SNP	SLC28A3	ENST00000376238	human	ensembl	74_37	-1	known	silent	c.54	p.G18	0.013	NULL	pfam_Nucleos_tra2_C,pfam_Nuclsd_transpt2,pfam_Nucleoside_recog_Gate,tigrfam_C_nuclsd_transpt_met_bac	-	no_errors	SLC28A3	HGNC	ENSG00000197506	tier1	-	-	63	0	0.00	52	4	7.14
SLC2A12	0	genome.wustl.edu	37	6	134327992	134327992	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	134327992	134327992	C	T	SNP	SLC2A12	ENST00000275230	human	ensembl	74_37	-1	known	missense	c.1525	p.G509S	1.000	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt	-	no_errors	SLC2A12	HGNC	ENSG00000146411	tier1	-	-	49	0	0.00	47	10	17.54
SLC2A13	0	genome.wustl.edu	37	12	40345040	40345040	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	40345040	40345040	G	A	SNP	SLC2A13	ENST00000380858	human	ensembl	74_37	-1	putative	silent	c.1053	p.G351	0.040	pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt	-	no_errors	SLC2A13	HGNC	ENSG00000151229	tier1	-	-	91	0	0.00	65	13	16.67
SLC2A9	0	genome.wustl.edu	37	4	9922179	9922179	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	9922179	9922179	C	T	SNP	SLC2A9	ENST00000264784	human	ensembl	74_37	-1	known	missense	c.832	p.G278S	1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A9	HGNC	ENSG00000109667	tier1	-	-	29	0	0.00	14	7	33.33
SLC30A10	0	genome.wustl.edu	37	1	220088998	220088998	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	220088998	220088998	G	-	DEL	SLC30A10	ENST00000366926	human	ensembl	74_37	-1	known	frame_shift_del	c.1251	p.A419fs	0.000	NULL	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A10	HGNC	ENSG00000196660	tier1			41	0	0.00	35	7	16.67
SLC30A5	0	genome.wustl.edu	37	5	68398896	68398896	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	68398896	68398896	T	-	DEL	SLC30A5	ENST00000396591	human	ensembl	74_37	+1	known	frame_shift_del	c.214	p.F73fs	0.996	NULL	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A5	HGNC	ENSG00000145740	tier1			125	0	0.00	109	32	22.70
SLC30A5	0	genome.wustl.edu	37	5	68411969	68411969	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	68411969	68411969	G	T	SNP	SLC30A5	ENST00000396591	human	ensembl	74_37	+1	known	missense	c.1000	p.A334S	0.974	NULL	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A5	HGNC	ENSG00000145740	tier1	-	-	49	0	0.00	35	4	10.26
SLC38A9	0	genome.wustl.edu	37	5	55008154	55008154	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	55008154	55008154	G	A	SNP	SLC38A9	ENST00000502416	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.321	-	-	-	no_errors	SLC38A9	HGNC	ENSG00000177058	tier1	-	-	85	0	0.00	61	11	15.28
SLC39A3	0	genome.wustl.edu	37	19	2737237	2737237	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	2737237	2737237	C	T	SNP	SLC39A3	ENST00000269740	human	ensembl	74_37	-1	known	missense	c.19	p.A7T	1.000	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A3	HGNC	ENSG00000141873	tier1	-	-	59	0	0.00	63	11	14.86
SLC39A7	0	genome.wustl.edu	37	6	33171577	33171577	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	33171577	33171577	C	T	SNP	SLC39A7	ENST00000374675	human	ensembl	74_37	+1	known	missense	c.1397	p.A466V	1.000	pfam_ZIP	pfam_ZIP,prints_Kininogen	-	no_errors	SLC39A7	HGNC	ENSG00000112473				43	0	0.00	26	3	10.34
SLC43A1	0	genome.wustl.edu	37	11	57254668	57254668	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	57254668	57254668	G	A	SNP	SLC43A1	ENST00000278426	human	ensembl	74_37	-1	known	missense	c.1433	p.T478M	0.997	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC43A1	HGNC	ENSG00000149150	tier1	-	-	98	0	0.00	68	10	12.82
SLC43A1	0	genome.wustl.edu	37	11	57265290	57265290	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	57265290	57265290	G	T	SNP	SLC43A1	ENST00000278426	human	ensembl	74_37	-1	known	missense	c.494	p.S165Y	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC43A1	HGNC	ENSG00000149150				37	0	0.00	30	3	9.09
SLC4A7	0	genome.wustl.edu	37	3	27450945	27450945	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	27450945	27450945	G	T	SNP	SLC4A7	ENST00000454389	human	ensembl	74_37	-1	known	missense	c.1843	p.L615M	1.000	pfam_HCO3_transpt_C,prints_HCO3_transpt_euk,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A7	HGNC	ENSG00000033867				46	0	0.00	44	5	10.20
SLC4A8	0	genome.wustl.edu	37	12	51868866	51868866	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	51868866	51868866	C	T	SNP	SLC4A8	ENST00000453097	human	ensembl	74_37	+1	known	missense	c.2048	p.A683V	0.999	pfam_HCO3_transpt_C,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A8	HGNC	ENSG00000050438	tier1	-	-	53	0	0.00	50	5	9.09
SLC5A11	0	genome.wustl.edu	37	16	24919407	24919407	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	24919407	24919407	G	A	SNP	SLC5A11	ENST00000347898	human	ensembl	74_37	+1	known	silent	c.1389	p.A463	0.043	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A11	HGNC	ENSG00000158865	tier1	-	-	60	0	0.00	39	9	18.75
SLC5A7	0	genome.wustl.edu	37	2	108626718	108626718	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	108626718	108626718	C	T	SNP	SLC5A7	ENST00000264047	human	ensembl	74_37	+1	known	nonsense	c.1144	p.R382*	1.000	pfam_Na/solute_symporter,pfscan_Na/solute_symporter	pfam_Na/solute_symporter,pfscan_Na/solute_symporter	-	no_errors	SLC5A7	HGNC	ENSG00000115665	tier1	-	-	86	0	0.00	45	21	31.82
SLC6A14	0	genome.wustl.edu	37	X	115569030	115569030	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	115569030	115569030	A	-	DEL	SLC6A14	ENST00000371900	human	ensembl	74_37	+1	known	frame_shift_del	c.121	p.K42fs	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	-	no_errors	SLC6A14	HGNC	ENSG00000087916	tier1			117	0	0.00	56	18	24.32
SLC6A9	0	genome.wustl.edu	37	1	44468596	44468596	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	44468596	44468596	G	T	SNP	SLC6A9	ENST00000360584	human	ensembl	74_37	-1	known	missense	c.871	p.L291I	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_glycine_GLY1	-	no_errors	SLC6A9	HGNC	ENSG00000196517	tier1	-	-	72	0	0.00	34	12	26.09
SLC8A1	0	genome.wustl.edu	37	2	40657337	40657337	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	40657337	40657337	G	T	SNP	SLC8A1	ENST00000332839	human	ensembl	74_37	-1	known	silent	c.84	p.S28	0.997	prints_NaCa_exhngr1,tigrfam_Na_Ca_Ex	pfam_NaCa_Exmemb,pfam_Calx_beta,smart_Calx_beta,pfscan_DnaJ_domain,prints_Na_Ca_Ex,prints_NaCa_exhngr1,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A1	HGNC	ENSG00000183023	tier1	-	-	32	0	0.00	40	4	9.09
SLC9A1	0	genome.wustl.edu	37	1	27429000	27429000	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	27429000	27429000	C	T	SNP	SLC9A1	ENST00000263980	human	ensembl	74_37	-1	known	missense	c.1696	p.E566K	1.000	tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_1,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A1	HGNC	ENSG00000090020	tier1	-	-	45	0	0.00	35	12	25.53
SLC9A3R1	0	genome.wustl.edu	37	17	72758236	72758236	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	72758236	72758236	G	C	SNP	SLC9A3R1	ENST00000262613	human	ensembl	74_37	+1	known	missense	c.527	p.G176A	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_NaH_exchngr_reg_CF_NHE-RF,pfscan_PDZ	pfam_PDZ,pfam_EBP50_C-term,superfamily_PDZ,smart_PDZ,pirsf_NaH_exchngr_reg_CF_NHE-RF,pfscan_PDZ	-	no_errors	SLC9A3R1	HGNC	ENSG00000109062	tier1	-	-	55	0	0.00	28	7	20.00
SLC9A7P1	0	genome.wustl.edu	37	12	98849361	98849361	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	98849361	98849361	G	T	SNP	SLC9A7P1	ENST00000554295	human	ensembl	74_37	-1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	SLC9A7P1	HGNC	ENSG00000227825				64	0	0.00	53	4	6.78
SLC9A9	0	genome.wustl.edu	37	3	143513850	143513850	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	143513850	143513850	C	T	SNP	SLC9A9	ENST00000316549	human	ensembl	74_37	-1	known	missense	c.526	p.V176I	0.989	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_6,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A9	HGNC	ENSG00000181804	tier1	-	-	61	0	0.00	42	13	23.64
SLC9C1	0	genome.wustl.edu	37	3	111936361	111936362	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	111936361	111936362	-	T	INS	SLC9C1	ENST00000305815	human	ensembl	74_37	-1	known	frame_shift_ins	c.1718_1717	p.T573fs	0.000:0.000	NULL	pfam_Cation/H_exchanger,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,pfscan_cNMP-bd_dom	-	no_errors	SLC9C1	HGNC	ENSG00000172139	tier1			77	0	0.00	75	10	11.76
SLCO2A1	0	genome.wustl.edu	37	3	133666102	133666103	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	133666102	133666103	-	G	INS	SLCO2A1	ENST00000310926	human	ensembl	74_37	-1	known	frame_shift_ins	c.1293_1292	p.S432fs	0.371:0.000	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO2A1	HGNC	ENSG00000174640	tier1			33	0	0.00	37	5	11.90
SLCO5A1	0	genome.wustl.edu	37	8	70674105	70674105	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	70674105	70674105	T	C	SNP	SLCO5A1	ENST00000260126	human	ensembl	74_37	-1	known	missense	c.913	p.M305V	1.000	pfam_OA_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO5A1	HGNC	ENSG00000137571	tier1	-	-	44	0	0.00	33	19	36.54
SLIT2	0	genome.wustl.edu	37	4	20255565	20255565	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	20255565	20255565	G	A	SNP	SLIT2	ENST00000504154	human	ensembl	74_37	+1	known	missense	c.127	p.G43R	1.000	pfam_LRR-contain_N,smart_LRR-contain_N	pfam_EG-like_dom,pfam_Laminin_G,pfam_Leu-rich_rpt,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Fol_N,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT2	HGNC	ENSG00000145147	tier1	-	-	63	0	0.00	47	12	20.34
SLIT3	0	genome.wustl.edu	37	5	168123370	168123372	+	In_Frame_Del	DEL	GTT	GTT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	GTT	GTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	168123370	168123372	GTT	-	DEL	SLIT3	ENST00000519560	human	ensembl	74_37	-1	known	in_frame_del	c.3009_3007	p.N1003in_frame_del	0.954:1.000:1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Leu-rich_rpt,pfam_Laminin_G,pfam_LRR-contain_N,pfam_Cys-rich_flank_reg_C,superfamily_ConA-like_lec_gl_sf,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Cys-rich_flank_reg_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	SLIT3	HGNC	ENSG00000184347	tier1			51	0	0.00	45	15	25.00
SLITRK2	0	genome.wustl.edu	37	X	144904398	144904398	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	144904398	144904398	G	T	SNP	SLITRK2	ENST00000370490	human	ensembl	74_37	+1	known	missense	c.455	p.G152V	0.998	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK2	HGNC	ENSG00000185985	tier1	-	-	36	0	0.00	11	5	31.25
SLITRK3	0	genome.wustl.edu	37	3	164908289	164908289	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	164908289	164908289	G	T	SNP	SLITRK3	ENST00000241274	human	ensembl	74_37	-1	known	missense	c.330	p.N110K	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK3	HGNC	ENSG00000121871				45	0	0.00	28	2	6.67
SLITRK5	0	genome.wustl.edu	37	13	88327706	88327706	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	88327706	88327706	G	A	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	nonsense	c.63	p.W21*	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300	tier1	-	-	64	0	0.00	29	9	23.68
SLITRK5	0	genome.wustl.edu	37	13	88330073	88330073	+	Silent	SNP	G	G	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	88330073	88330073	G	C	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	silent	c.2430	p.P810	0.861	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300	tier1	-	-	24	0	0.00	4	3	42.86
SLTM	0	genome.wustl.edu	37	15	59182525	59182526	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	59182525	59182526	TC	-	DEL	SLTM	ENST00000380516	human	ensembl	74_37	-1	known	frame_shift_del	c.2034_2033	p.R678fs	0.999:1.000	NULL	pfam_RRM_dom,pfam_SAP_dom,smart_SAP_dom,smart_RRM_dom,pfscan_SAP_dom,pfscan_RRM_dom	-	no_errors	SLTM	HGNC	ENSG00000137776	tier1			28	0	0.00	17	5	22.73
SMAD5	0	genome.wustl.edu	37	5	135515157	135515157	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	135515157	135515157	A	-	DEL	SMAD5	ENST00000514641	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SMAD5	HGNC	ENSG00000113658	tier1			51	0	0.00	43	4	8.51
SMARCD2	0	genome.wustl.edu	37	17	61911039	61911039	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	61911039	61911039	C	T	SNP	SMARCD2	ENST00000448276	human	ensembl	74_37	-1	known	missense	c.1225	p.D409N	1.000	NULL	pfam_SWIB_MDM2_domain,superfamily_SWIB_MDM2_domain,smart_SWIB_domain	-	no_errors	SMARCD2	HGNC	ENSG00000108604	tier1	-	-	47	0	0.00	40	7	14.89
SMARCD3	0	genome.wustl.edu	37	7	150936201	150936201	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	150936201	150936201	C	T	SNP	SMARCD3	ENST00000262188	human	ensembl	74_37	-1	known	silent	c.1440	p.V480	1.000	NULL	pfam_SWIB_MDM2_domain,superfamily_SWIB_MDM2_domain,smart_SWIB_domain	-	no_errors	SMARCD3	HGNC	ENSG00000082014	tier1	-	-	52	0	0.00	27	6	18.18
SMC4	0	genome.wustl.edu	37	3	160134136	160134136	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	160134136	160134136	A	-	DEL	SMC4	ENST00000344722	human	ensembl	74_37	+1	known	frame_shift_del	c.1370	p.K459fs	1.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,superfamily_Chemotax_Me-accpt_rcpt_lig-bd,superfamily_Prefoldin,smart_SMC_hinge	-	no_errors	SMC4	HGNC	ENSG00000113810	tier1			37	0	0.00	20	4	16.67
SMC6	0	genome.wustl.edu	37	2	17898356	17898356	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	17898356	17898356	T	-	DEL	SMC6	ENST00000381272	human	ensembl	74_37	-1	known	frame_shift_del	c.1258	p.S420fs	0.998	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	SMC6	HGNC	ENSG00000163029	tier1			52	0	0.00	46	7	13.21
SMCO2	0	genome.wustl.edu	37	12	27628630	27628630	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	27628630	27628630	A	-	DEL	SMCO2	ENST00000416383	human	ensembl	74_37	+1	known	frame_shift_del	c.478	p.I162fs	0.000	NULL	NULL	-	no_errors	SMCO2	HGNC	ENSG00000165935	tier1			60	0	0.00	61	7	10.29
SMG6	0	genome.wustl.edu	37	17	1964760	1964760	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	1964760	1964760	G	-	DEL	SMG6	ENST00000570756	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.027	-	-	-	no_errors	SMG6	HGNC	ENSG00000070366	tier1			35	0	0.00	41	6	12.77
SMG6	0	genome.wustl.edu	37	17	1964769	1964770	+	RNA	DEL	GC	GC	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	GC	GC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	1964769	1964770	GC	-	DEL	SMG6	ENST00000570756	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.044:0.088	-	-	-	no_errors	SMG6	HGNC	ENSG00000070366	tier1			35	0	0.00	26	11	29.73
SMG6	0	genome.wustl.edu	37	17	2202942	2202942	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	2202942	2202942	C	T	SNP	SMG6	ENST00000263073	human	ensembl	74_37	-1	known	missense	c.1105	p.A369T	0.001	NULL	pfam_EST1,smart_PIN_dom	-	no_errors	SMG6	HGNC	ENSG00000070366	tier1	-	-	67	0	0.00	46	4	8.00
SMUG1	0	genome.wustl.edu	37	12	54576259	54576259	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	54576259	54576259	A	-	DEL	SMUG1	ENST00000337581	human	ensembl	74_37	-1	known	frame_shift_del	c.434	p.F145fs	1.000	pfam_Uracil-DNA_glycosylase-like,superfamily_Uracil-DNA_glycosylase-like	pfam_Uracil-DNA_glycosylase-like,superfamily_Uracil-DNA_glycosylase-like	-	no_errors	SMUG1	HGNC	ENSG00000123415	tier1			33	0	0.00	32	4	11.11
SNAP25	0	genome.wustl.edu	37	20	10287898	10287898	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	10287898	10287898	A	G	SNP	SNAP25	ENST00000495883	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNAP25	HGNC	ENSG00000132639	tier1	-	-	36	0	0.00	35	11	23.91
SNAPC1	0	genome.wustl.edu	37	14	62242910	62242911	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	62242910	62242911	-	T	INS	SNAPC1	ENST00000216294	human	ensembl	74_37	+1	known	frame_shift_ins	c.632_633	p.D214fs	1.000:0.961	NULL	pfam_SNAPc_SNAP43	-	no_errors	SNAPC1	HGNC	ENSG00000023608	tier1			54	0	0.00	59	6	9.23
SNHG14	0	genome.wustl.edu	37	15	25456847	25456847	+	RNA	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	25456847	25456847	G	T	SNP	SNHG14	ENST00000424208	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078	tier1	-	-	46	0	0.00	25	5	16.67
SNHG6	0	genome.wustl.edu	37	8	67834877	67834877	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	67834877	67834877	T	-	DEL	SNHG6	ENST00000520348	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SNHG6	HGNC	ENSG00000245910	tier1			8	0	0.00	10	3	23.08
SNORA72	0	genome.wustl.edu	37	8	99054837	99054837	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	99054837	99054837	A	-	DEL	SNORA72	ENST00000501016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.049	-	-	-	no_errors	KB-1208A12.3	Clone_based_vega_gene	ENSG00000245970	tier1			52	0	0.00	71	11	13.41
SNORD57	0	genome.wustl.edu	37	20	2637628	2637629	+	RNA	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	2637628	2637629	-	A	INS	SNORD57	ENST00000448188	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:0.987	-	-	-	no_errors	SNORD57	HGNC	ENSG00000226572	tier1			50	0	0.00	38	7	15.56
SNPH	0	genome.wustl.edu	37	20	1277890	1277890	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	1277890	1277890	C	A	SNP	SNPH	ENST00000381867	human	ensembl	74_37	+1	known	missense	c.284	p.T95K	1.000	NULL	NULL	-	no_errors	SNPH	HGNC	ENSG00000101298				37	0	0.00	31	3	8.82
SNRNP27	0	genome.wustl.edu	37	2	70122235	70122235	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	70122235	70122235	G	A	SNP	SNRNP27	ENST00000244227	human	ensembl	74_37	+1	known	missense	c.44	p.R15H	1.000	pfam_DUF1777	pfam_DUF1777	-	no_errors	SNRNP27	HGNC	ENSG00000124380	tier1	-	-	53	0	0.00	31	8	20.51
SNRNP40	0	genome.wustl.edu	37	1	31732678	31732679	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	31732678	31732679	AA	-	DEL	SNRNP40	ENST00000486941	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.040:0.034	-	-	-	no_errors	SNRNP40	HGNC	ENSG00000060688	tier1			40	0	0.00	29	10	25.64
SNRPN	0	genome.wustl.edu	37	15	25221489	25221489	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	25221489	25221489	C	T	SNP	SNRPN	ENST00000444203	human	ensembl	74_37	+1	known	missense	c.205	p.R69W	1.000	pfam_Ribonucl_LSM,superfamily_LSM_dom,smart_Ribonucl_LSM_euk/arc,pirsf_snRNP-assoc_SmB/SmN	pfam_Ribonucl_LSM,superfamily_LSM_dom,smart_Ribonucl_LSM_euk/arc,pirsf_snRNP-assoc_SmB/SmN	-	no_errors	SNRPN	HGNC	ENSG00000128739	tier1	-	-	59	0	0.00	47	6	11.32
SNTG2	0	genome.wustl.edu	37	2	1312285	1312285	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	1312285	1312285	G	A	SNP	SNTG2	ENST00000308624	human	ensembl	74_37	+1	known	missense	c.1304	p.S435N	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SNTG2	HGNC	ENSG00000172554	tier1	-	-	53	0	0.00	42	6	12.50
SNUPN	0	genome.wustl.edu	37	15	75902272	75902272	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	75902272	75902272	C	T	SNP	SNUPN	ENST00000371091	human	ensembl	74_37	-1	known	missense	c.493	p.V165M	1.000	pirsf_Snurportin-1	pfam_Snurportin-1_N,pirsf_Snurportin-1,pfscan_Importin-a_IBB	-	no_errors	SNUPN	HGNC	ENSG00000169371	tier1	-	-	50	0	0.00	24	16	40.00
SNX20	0	genome.wustl.edu	37	16	50707923	50707923	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	50707923	50707923	C	T	SNP	SNX20	ENST00000330943	human	ensembl	74_37	-1	known	silent	c.345	p.R115	0.937	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX20	HGNC	ENSG00000167208	tier1	-	-	24	0	0.00	15	7	31.82
SNX21	0	genome.wustl.edu	37	20	44470649	44470651	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	44470649	44470651	TTT	-	DEL	SNX21	ENST00000344780	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.017:0.013:0.007	-	-	-	no_errors	SNX21	HGNC	ENSG00000124104	tier1			65	0	0.00	50	12	19.35
SOD1	0	genome.wustl.edu	37	21	33040846	33040846	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	33040846	33040846	C	T	SNP	SOD1	ENST00000270142	human	ensembl	74_37	+1	known	silent	c.420	p.N140	0.997	pfam_SOD_Cu_Zn_dom,superfamily_SOD_Cu_Zn_dom,prints_SOD_Cu_Zn_dom	pfam_SOD_Cu_Zn_dom,superfamily_SOD_Cu_Zn_dom,prints_SOD_Cu_Zn_dom	-	no_errors	SOD1	HGNC	ENSG00000142168	tier1	rs1804449	-	35	0	0.00	20	7	25.93
SOD2	0	genome.wustl.edu	37	6	160113437	160113437	+	Splice_Site	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	160113437	160113437	C	T	SNP	SOD2	ENST00000540491	human	ensembl	74_37	-1	known	splice_site	c.NULL	NULL	0.000	-	-	-	no_errors	SOD2	HGNC	ENSG00000112096	tier1	-	-	38	0	0.00	22	9	29.03
SOGA1	0	genome.wustl.edu	37	20	35414897	35414897	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	35414897	35414897	G	-	DEL	SOGA1	ENST00000237536	human	ensembl	74_37	-1	known	frame_shift_del	c.4977	p.S1660fs	0.644	NULL	pfam_SOGA	-	no_errors	SOGA1	HGNC	ENSG00000149639	tier1			63	0	0.00	37	8	17.78
SOGA2	0	genome.wustl.edu	37	18	8818982	8818982	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	8818982	8818982	C	T	SNP	SOGA2	ENST00000359865	human	ensembl	74_37	+1	known	missense	c.2881	p.R961W	0.453	NULL	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502	tier1	rs149462341	-	37	0	0.00	17	4	19.05
SOGA2	0	genome.wustl.edu	37	18	8825003	8825003	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	8825003	8825003	G	A	SNP	SOGA2	ENST00000359865	human	ensembl	74_37	+1	known	silent	c.3495	p.T1165	0.616	NULL	pfam_SOGA	-	no_errors	SOGA2	HGNC	ENSG00000168502	tier1	rs114022207	-	50	0	0.00	43	14	24.56
SORBS1	0	genome.wustl.edu	37	10	97174480	97174480	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	97174480	97174480	G	A	SNP	SORBS1	ENST00000361941	human	ensembl	74_37	-1	known	missense	c.581	p.A194V	1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain	-	no_errors	SORBS1	HGNC	ENSG00000095637	tier1	-	-	57	0	0.00	62	5	7.46
SORBS2	0	genome.wustl.edu	37	4	186544439	186544439	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	186544439	186544439	T	-	DEL	SORBS2	ENST00000284776	human	ensembl	74_37	-1	known	frame_shift_del	c.2132	p.N711fs	0.203	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SORBS2	HGNC	ENSG00000154556	tier1			54	0	0.00	42	5	10.64
SORBS2	0	genome.wustl.edu	37	4	186545131	186545131	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	186545131	186545131	G	A	SNP	SORBS2	ENST00000284776	human	ensembl	74_37	-1	known	silent	c.1440	p.Y480	0.364	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SORBS2	HGNC	ENSG00000154556	tier1	-	-	38	0	0.00	28	5	15.15
SORCS1	0	genome.wustl.edu	37	10	108923780	108923780	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	108923780	108923780	C	T	SNP	SORCS1	ENST00000344440	human	ensembl	74_37	-1	known	missense	c.505	p.G169R	0.994	NULL	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS1	HGNC	ENSG00000108018	tier1	-	-	44	0	0.00	26	13	33.33
SORCS2	0	genome.wustl.edu	37	4	7725564	7725564	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	7725564	7725564	G	T	SNP	SORCS2	ENST00000507866	human	ensembl	74_37	+1	known	missense	c.2565	p.E855D	1.000	pfam_PKD_dom,superfamily_PKD_dom,smart_PKD/Chitinase_dom,pfscan_PKD_dom	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,smart_PKD/Chitinase_dom,pfscan_PKD_dom	-	no_errors	SORCS2	HGNC	ENSG00000184985	tier1	-	-	37	0	0.00	25	12	32.43
SORL1	0	genome.wustl.edu	37	11	121489505	121489505	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	121489505	121489505	C	T	SNP	SORL1	ENST00000260197	human	ensembl	74_37	+1	known	missense	c.5627	p.T1876M	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642	tier1	rs149445303	-	66	0	0.00	61	18	22.78
SOWAHD	0	genome.wustl.edu	37	X	118893451	118893451	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	118893451	118893451	C	T	SNP	SOWAHD	ENST00000343905	human	ensembl	74_37	+1	known	missense	c.821	p.A274V	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SOWAHD	HGNC	ENSG00000187808	tier1	-	-	33	0	0.00	9	5	35.71
SOX14	0	genome.wustl.edu	37	3	137483819	137483819	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	137483819	137483819	C	T	SNP	SOX14	ENST00000306087	human	ensembl	74_37	+1	known	missense	c.193	p.R65C	1.000	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_HMG_box_dom,pfam_TF_SOX,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX14	HGNC	ENSG00000168875	tier1	-	-	75	0	0.00	64	9	12.33
SOX17	0	genome.wustl.edu	37	8	55370816	55370816	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	55370816	55370816	G	A	SNP	SOX17	ENST00000297316	human	ensembl	74_37	+1	known	missense	c.118	p.G40R	1.000	NULL	pfam_Sox_C_TAD,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX17	HGNC	ENSG00000164736	tier1	-	-	14	0	0.00	10	7	41.18
SOX2	0	genome.wustl.edu	37	3	181431011	181431011	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	181431011	181431011	C	-	DEL	SOX2	ENST00000325404	human	ensembl	74_37	+1	known	frame_shift_del	c.863	p.S290fs	1.000	NULL	pfam_TF_SOX,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX2	HGNC	ENSG00000181449	tier1			37	0	0.00	15	3	16.67
SP100	0	genome.wustl.edu	37	2	231334496	231334496	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	231334496	231334496	A	-	DEL	SP100	ENST00000341950	human	ensembl	74_37	+1	known	frame_shift_del	c.1350	p.K453fs	0.007	NULL	pfam_Sp100	-	no_errors	SP100	HGNC	ENSG00000067066	tier1			23	0	0.00	19	8	29.63
SP140	0	genome.wustl.edu	37	2	231159025	231159025	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	231159025	231159025	A	-	DEL	SP140	ENST00000392045	human	ensembl	74_37	+1	known	frame_shift_del	c.2008	p.K672fs	0.001	NULL	pfam_Sp100,pfam_SAND_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom,pfscan_Bromodomain	-	no_errors	SP140	HGNC	ENSG00000079263	tier1			76	0	0.00	56	19	25.33
SP8	0	genome.wustl.edu	37	7	20824432	20824432	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	20824432	20824432	C	-	DEL	SP8	ENST00000418710	human	ensembl	74_37	-1	known	frame_shift_del	c.1004	p.G335fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2,prints_Antifreeze_1	-	no_errors	SP8	HGNC	ENSG00000164651	tier1			15	0	0.00	15	4	21.05
SPAG16	0	genome.wustl.edu	37	2	214160791	214160791	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	214160791	214160791	T	A	SNP	SPAG16	ENST00000331683	human	ensembl	74_37	+1	known	missense	c.140	p.V47D	0.828	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	SPAG16	HGNC	ENSG00000144451	tier1	-	-	92	0	0.00	71	13	15.48
SPAG17	0	genome.wustl.edu	37	1	118509241	118509241	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	118509241	118509241	C	T	SNP	SPAG17	ENST00000336338	human	ensembl	74_37	-1	known	missense	c.6523	p.V2175M	0.999	NULL	NULL	-	no_errors	SPAG17	HGNC	ENSG00000155761	tier1	-	-	53	0	0.00	64	4	5.88
SPATA31C1	0	genome.wustl.edu	37	9	90535546	90535546	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	90535546	90535546	C	T	SNP	SPATA31C1	ENST00000602681	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SPATA31C1	HGNC	ENSG00000230246	tier1	-	-	207	0	0.00	137	40	22.60
SPATA31D3	0	genome.wustl.edu	37	9	84564459	84564459	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	84564459	84564459	T	C	SNP	SPATA31D3	ENST00000334208	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SPATA31D3	HGNC	ENSG00000186788				36	0	0.00	45	3	6.25
SPATA31D5P	0	genome.wustl.edu	37	9	84531279	84531279	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	84531279	84531279	A	-	DEL	SPATA31D5P	ENST00000527857	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SPATA31D5P	HGNC	ENSG00000240632	tier1			48	0	0.00	53	9	14.52
SPATA6	0	genome.wustl.edu	37	1	48821240	48821240	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	48821240	48821240	T	-	DEL	SPATA6	ENST00000487629	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.023	-	-	-	no_errors	SPATA6	HGNC	ENSG00000132122	tier1			14	0	0.00	21	3	12.50
SPEF2	0	genome.wustl.edu	37	5	35705894	35705895	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	35705894	35705895	AA	-	DEL	SPEF2	ENST00000356031	human	ensembl	74_37	+1	known	frame_shift_del	c.2649_2650	p.K886fs	0.129:0.963	NULL	pfam_DUF1042,pfam_Adenylate_kin,pfam_HATC_dom_C,superfamily_P-loop_NTPase,superfamily_CH-domain,pfscan_CH-domain	-	no_errors	SPEF2	HGNC	ENSG00000152582	tier1			47	0	0.00	43	14	24.56
SPEF2	0	genome.wustl.edu	37	5	35779244	35779244	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	35779244	35779244	C	T	SNP	SPEF2	ENST00000356031	human	ensembl	74_37	+1	known	missense	c.4243	p.R1415C	1.000	NULL	pfam_DUF1042,pfam_Adenylate_kin,pfam_HATC_dom_C,superfamily_P-loop_NTPase,superfamily_CH-domain,pfscan_CH-domain	-	no_errors	SPEF2	HGNC	ENSG00000152582	tier1	-	-	57	0	0.00	31	21	40.38
SPEG	0	genome.wustl.edu	37	2	220349121	220349121	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	220349121	220349121	G	A	SNP	SPEG	ENST00000312358	human	ensembl	74_37	+1	novel	silent	c.6936	p.V2312	0.000	NULL	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	SPEG	HGNC	ENSG00000072195	tier1	-	-	65	0	0.00	41	7	14.58
SPEN	0	genome.wustl.edu	37	1	16260997	16260997	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	16260997	16260997	G	T	SNP	SPEN	ENST00000375759	human	ensembl	74_37	+1	known	silent	c.8262	p.T2754	0.185	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC_like_C_dom,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	SPEN	HGNC	ENSG00000065526	tier1	-	-	53	0	0.00	22	12	35.29
SPG11	0	genome.wustl.edu	37	15	44907749	44907750	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	44907749	44907750	-	A	INS	SPG11	ENST00000261866	human	ensembl	74_37	-1	known	frame_shift_ins	c.2850_2849	p.L950fs	0.098:0.982	NULL	NULL	-	no_errors	SPG11	HGNC	ENSG00000104133	tier1			20	0	0.00	25	3	10.71
SPHK2	0	genome.wustl.edu	37	19	49129476	49129476	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	49129476	49129476	G	C	SNP	SPHK2	ENST00000443164	human	ensembl	74_37	+1	known	missense	c.554	p.G185A	0.986	NULL	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	-	no_errors	SPHK2	HGNC	ENSG00000063176	tier1	-	-	17	0	0.00	5	6	54.55
SPIN2B	0	genome.wustl.edu	37	X	57146545	57146545	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	57146545	57146545	T	C	SNP	SPIN2B	ENST00000275988	human	ensembl	74_37	-1	known	missense	c.518	p.Y173C	1.000	pfam_Spin_Ssty	pfam_Spin_Ssty	-	no_errors	SPIN2B	HGNC	ENSG00000186787	tier1	-	-	43	0	0.00	26	4	13.33
SPINK13	0	genome.wustl.edu	37	5	147649640	147649640	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	147649640	147649640	C	A	SNP	SPINK13	ENST00000398450	human	ensembl	74_37	+1	known	missense	c.5	p.A2D	0.945	NULL	pfam_Kazal_dom,smart_Kazal_dom	-	no_errors	SPINK13	HGNC	ENSG00000214510	tier1	-	-	88	0	0.00	54	10	15.62
SPNS1	0	genome.wustl.edu	37	16	28995600	28995600	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	28995600	28995600	G	A	SNP	SPNS1	ENST00000311008	human	ensembl	74_37	+1	known	missense	c.1567	p.V523M	0.979	NULL	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SPNS1	HGNC	ENSG00000169682				19	0	0.00	17	3	15.00
SPPL2B	0	genome.wustl.edu	37	19	2353292	2353292	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	2353292	2353292	G	A	SNP	SPPL2B	ENST00000452401	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SPPL2B	HGNC	ENSG00000005206				16	0	0.00	6	3	33.33
SPRED1	0	genome.wustl.edu	37	15	38545225	38545225	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	38545225	38545225	G	-	DEL	SPRED1	ENST00000561205	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	SPRED1	HGNC	ENSG00000166068	tier1			25	0	0.00	17	4	19.05
SPRYD7	0	genome.wustl.edu	37	13	50502184	50502184	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	50502184	50502184	G	C	SNP	SPRYD7	ENST00000361840	human	ensembl	74_37	-1	known	missense	c.261	p.N87K	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	-	no_errors	SPRYD7	HGNC	ENSG00000123178	tier1	-	-	96	0	0.00	57	10	14.93
SPTA1	0	genome.wustl.edu	37	1	158632566	158632566	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	158632566	158632566	A	T	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.2390	p.L797Q	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554	tier1	-	-	69	0	0.00	41	6	12.50
SPTBN2	0	genome.wustl.edu	37	11	66472851	66472851	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	66472851	66472851	C	T	SNP	SPTBN2	ENST00000309996	human	ensembl	74_37	-1	known	silent	c.1896	p.A632	0.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN2	HGNC	ENSG00000173898				18	0	0.00	26	5	16.13
SPTBN5	0	genome.wustl.edu	37	15	42147436	42147436	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	42147436	42147436	G	T	SNP	SPTBN5	ENST00000320955	human	ensembl	74_37	-1	known	missense	c.9409	p.L3137M	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN5	HGNC	ENSG00000137877	tier1	-	-	52	0	0.00	47	18	27.69
SRCAP	0	genome.wustl.edu	37	16	30736371	30736371	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	30736371	30736371	C	-	DEL	SRCAP	ENST00000262518	human	ensembl	74_37	+1	known	frame_shift_del	c.5626	p.P1878fs	1.000	NULL	pfam_SNF2_N,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_HAS_subgr,smart_Helicase_ATP-bd,smart_Helicase_C,smart_AT_hook_DNA-bd_motif,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,prints_AT_hook-like	-	no_errors	SRCAP	HGNC	ENSG00000080603	tier1			73	0	0.00	52	6	10.34
SREK1	0	genome.wustl.edu	37	5	65475195	65475195	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	65475195	65475195	C	T	SNP	SREK1	ENST00000284041	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	SREK1	HGNC	ENSG00000153914	tier1	-	-	72	0	0.00	53	20	27.40
SRGAP2-AS1	0	genome.wustl.edu	37	1	121103696	121103696	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	121103696	121103696	T	0	DEL	SRGAP2-AS1	ENST00000437515	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.989	-	-	-	no_errors	RP11-343N15.1	Clone_based_vega_gene	ENSG00000230806				16	0	0.00	15	11	42.31
SRPR	0	genome.wustl.edu	37	11	126137087	126137087	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	126137087	126137087	T	0	DEL	SRPR	ENST00000332118	human	ensembl	74_37	-1	known	frame_shift_del	c.509	p.K170fs	0.991	pfam_Sig_recog_particle_rcpt_asu_N	pfam_Sig_recog_particle_rcpt_asu_N,pfam_SRP54_GTPase_dom,pfam_ArgK,pfam_CobQ/CobB/MinD/ParA_Nub-bd_dom,pfam_Signal_recog_particl_SRP54_hlx,superfamily_Longin-like_dom,superfamily_P-loop_NTPase,superfamily_Signal_recog_particl_SRP54_hlx,smart_Signal_recog_particl_SRP54_hlx,smart_AAA+_ATPase,smart_SRP54_GTPase_dom	-	no_errors	SRPR	HGNC	ENSG00000182934				111	0	0.00	88	7	7.37
SRRM3	0	genome.wustl.edu	37	7	75894705	75894705	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	75894705	75894705	G	A	SNP	SRRM3	ENST00000388802	human	ensembl	74_37	+1	known	missense	c.749	p.R250Q	0.461	NULL	pfam_mRNA_splic_Cwf21	-	no_errors	SRRM3	HGNC	ENSG00000177679	tier1	-	-	76	0	0.00	49	10	16.95
SSH2	0	genome.wustl.edu	37	17	27958431	27958431	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	27958431	27958431	G	A	SNP	SSH2	ENST00000269033	human	ensembl	74_37	-1	known	missense	c.3700	p.R1234C	0.845	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH2	HGNC	ENSG00000141298	tier1	-	-	53	0	0.00	44	16	26.67
SSMEM1	0	genome.wustl.edu	37	7	129847928	129847928	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	129847928	129847928	G	T	SNP	SSMEM1	ENST00000297819	human	ensembl	74_37	+1	known	missense	c.178	p.V60F	0.839	NULL	NULL	-	no_errors	SSMEM1	HGNC	ENSG00000165120				56	0	0.00	33	2	5.71
SSPO	0	genome.wustl.edu	37	7	149484529	149484529	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	149484529	149484529	G	A	SNP	SSPO	ENST00000262089	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1	-	-	40	0	0.00	42	5	10.64
SSPO	0	genome.wustl.edu	37	7	149501110	149501110	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	149501110	149501110	G	-	DEL	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1			100	0	0.00	54	5	8.47
SSTR3	0	genome.wustl.edu	37	22	37602691	37602691	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	37602691	37602691	C	T	SNP	SSTR3	ENST00000328544	human	ensembl	74_37	-1	known	silent	c.1152	p.G384	0.013	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt_3,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Somatstn_rcpt_5,prints_Neuropept_B/W_rcpt	-	no_errors	SSTR3	HGNC	ENSG00000183473	tier1	-	-	93	0	0.00	57	4	6.56
ST18	0	genome.wustl.edu	37	8	53071577	53071577	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	53071577	53071577	A	G	SNP	ST18	ENST00000276480	human	ensembl	74_37	-1	known	missense	c.1687	p.Y563H	1.000	pfam_Myelin_TF	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	ST18	HGNC	ENSG00000147488	tier1	-	-	36	0	0.00	54	5	8.47
ST3GAL2	0	genome.wustl.edu	37	16	70415756	70415756	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	70415756	70415756	A	G	SNP	ST3GAL2	ENST00000342907	human	ensembl	74_37	-1	known	missense	c.889	p.Y297H	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST3GAL2	HGNC	ENSG00000157350	tier1	-	-	57	0	0.00	40	10	20.00
ST6GAL2	0	genome.wustl.edu	37	2	107423316	107423316	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	107423316	107423316	C	T	SNP	ST6GAL2	ENST00000361686	human	ensembl	74_37	-1	known	missense	c.1408	p.E470K	1.000	pfam_Glyco_trans_29	pfam_Glyco_trans_29,superfamily_Glyco_hydro/deAcase_b/a-brl	-	no_errors	ST6GAL2	HGNC	ENSG00000144057	tier1	rs141942088	-	14	0	0.00	12	6	33.33
ST6GALNAC4	0	genome.wustl.edu	37	9	130672349	130672349	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	130672349	130672349	G	-	DEL	ST6GALNAC4	ENST00000495983	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ST6GALNAC4	HGNC	ENSG00000136840	tier1			74	0	0.00	46	14	23.33
ST7-OT4	0	genome.wustl.edu	37	7	116596663	116596663	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	116596663	116596663	G	-	DEL	ST7-OT4	ENST00000397750	human	ensembl	74_37	+1	putative	frame_shift_del	c.256	p.G87fs	0.000	NULL	NULL	-	no_errors	ST7-OT4	HGNC	ENSG00000214188	tier1			54	0	0.00	34	6	15.00
STARD13	0	genome.wustl.edu	37	13	33703975	33703975	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	33703975	33703975	C	A	SNP	STARD13	ENST00000336934	human	ensembl	74_37	-1	known	missense	c.839	p.R280L	0.835	NULL	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	STARD13	HGNC	ENSG00000133121	tier1	-	-	45	0	0.00	28	7	20.00
STARD7	0	genome.wustl.edu	37	2	96852544	96852544	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	96852544	96852544	T	C	SNP	STARD7	ENST00000337288	human	ensembl	74_37	-1	known	missense	c.1037	p.E346G	1.000	NULL	pfam_START_lipid-bd_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom	-	no_errors	STARD7	HGNC	ENSG00000084090	tier1	-	-	75	0	0.00	47	11	18.97
STARD9	0	genome.wustl.edu	37	15	42982290	42982290	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	42982290	42982290	T	C	SNP	STARD9	ENST00000290607	human	ensembl	74_37	+1	known	silent	c.8514	p.P2838	0.000	NULL	pfam_Kinesin_motor_dom,pfam_START_lipid-bd_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,pfscan_START_lipid-bd_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	STARD9	HGNC	ENSG00000159433	tier1	-	-	22	0	0.00	16	5	23.81
STAT1	0	genome.wustl.edu	37	2	191873795	191873795	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	191873795	191873795	C	T	SNP	STAT1	ENST00000361099	human	ensembl	74_37	-1	known	missense	c.167	p.R56H	0.003	pfam_STAT_TF_prot_interaction,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_STAT1_TAZ2-bd_C,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,pfscan_SH2	-	no_errors	STAT1	HGNC	ENSG00000115415	tier1	-	-	58	0	0.00	31	9	22.50
STAT5A	0	genome.wustl.edu	37	17	40453399	40453399	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	40453399	40453399	C	-	DEL	STAT5A	ENST00000345506	human	ensembl	74_37	+1	known	frame_shift_del	c.1096	p.Q368fs	1.000	pfam_STAT_TF_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT5A	HGNC	ENSG00000126561	tier1			90	0	0.00	72	12	14.29
STAT5B	0	genome.wustl.edu	37	17	40370235	40370236	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	40370235	40370236	-	G	INS	STAT5B	ENST00000293328	human	ensembl	74_37	-1	known	frame_shift_ins	c.1103_1102	p.Q368fs	1.000:1.000	pfam_STAT_TF_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT5B	HGNC	ENSG00000173757	tier1			79	0	0.00	41	13	24.07
STH	0	genome.wustl.edu	37	17	44076968	44076968	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	44076968	44076968	A	G	SNP	STH	ENST00000537309	human	ensembl	74_37	+1	known	missense	c.323	p.H108R	0.000	NULL	NULL	-	no_errors	STH	HGNC	ENSG00000256762	tier1	-	-	29	0	0.00	28	6	17.65
STK11	0	genome.wustl.edu	37	19	1221309	1221310	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	1221309	1221310	TG	0	DEL	STK11	ENST00000326873	human	ensembl	74_37	+1	known	frame_shift_del	c.832_833	p.C278fs	1.000:1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK11	HGNC	ENSG00000118046				74	0	0.00	63	6	8.70
STON2	0	genome.wustl.edu	37	14	81737144	81737144	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	81737144	81737144	G	A	SNP	STON2	ENST00000267540	human	ensembl	74_37	-1	known	missense	c.2483	p.A828V	1.000	pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Stonin,pfscan_Clathrin_mu_C	pfam_Stonin2_N,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C,pirsf_Stonin,pfscan_Clathrin_mu_C,pfscan_SHD	-	no_errors	STON2	HGNC	ENSG00000140022				20	0	0.00	33	2	5.71
STX16-NPEPL1	0	genome.wustl.edu	37	20	57266488	57266488	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	57266488	57266488	A	-	DEL	STX16-NPEPL1	ENST00000530122	human	ensembl	74_37	+1	known	frame_shift_del	c.1095	p.N368fs	0.000	NULL	pfam_T_SNARE_dom,pfam_Syntaxin_N,superfamily_t-SNARE,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX16-NPEPL1	HGNC	ENSG00000254995	tier1			55	0	0.00	48	9	15.79
STX4	0	genome.wustl.edu	37	16	31044421	31044421	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	31044421	31044421	C	T	SNP	STX4	ENST00000493902	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	STX4	HGNC	ENSG00000103496	tier1	-	-	24	0	0.00	27	4	12.90
SUGT1	0	genome.wustl.edu	37	13	53239840	53239840	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	53239840	53239840	A	G	SNP	SUGT1	ENST00000343788	human	ensembl	74_37	+1	known	missense	c.587	p.D196G	1.000	pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom	pfam_SGS,pfam_CS_dom,superfamily_HSP20-like_chaperone,smart_TPR_repeat,pfscan_CS_dom,pfscan_SGS,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	SUGT1	HGNC	ENSG00000165416	tier1	-	-	62	0	0.00	49	4	7.55
SUPT6H	0	genome.wustl.edu	37	17	27002426	27002426	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	27002426	27002426	C	T	SNP	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	silent	c.546	p.D182	0.115	pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111	tier1	-	-	29	0	0.00	25	8	24.24
SUPT6H	0	genome.wustl.edu	37	17	27028124	27028124	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	27028124	27028124	C	T	SNP	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	missense	c.4972	p.R1658W	0.981	NULL	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111	tier1	-	-	45	0	0.00	28	20	41.67
SUSD3	0	genome.wustl.edu	37	9	95838183	95838183	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	95838183	95838183	G	T	SNP	SUSD3	ENST00000375472	human	ensembl	74_37	+1	known	missense	c.206	p.G69V	0.990	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	SUSD3	HGNC	ENSG00000157303	tier1	-	-	45	0	0.00	36	12	25.00
SVOPL	0	genome.wustl.edu	37	7	138356801	138356801	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	138356801	138356801	C	A	SNP	SVOPL	ENST00000419765	human	ensembl	74_37	-1	novel	missense	c.236	p.W79L	1.000	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SVOPL	HGNC	ENSG00000157703	tier1	-	-	113	0	0.00	65	18	21.69
SYCP1	0	genome.wustl.edu	37	1	115419373	115419373	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	115419373	115419373	A	-	DEL	SYCP1	ENST00000369518	human	ensembl	74_37	+1	known	frame_shift_del	c.743	p.I250fs	1.000	pfam_SCP-1	pfam_SCP-1	-	no_errors	SYCP1	HGNC	ENSG00000198765	tier1			121	0	0.00	88	33	27.27
SYCP3	0	genome.wustl.edu	37	12	102122901	102122901	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	102122901	102122901	T	-	DEL	SYCP3	ENST00000266743	human	ensembl	74_37	-1	known	frame_shift_del	c.643	p.I215fs	0.988	NULL	pfam_Cor1/Xlr/Xmr	-	no_errors	SYCP3	HGNC	ENSG00000139351	tier1			49	0	0.00	39	5	11.36
SYDE1	0	genome.wustl.edu	37	19	15218306	15218306	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	15218306	15218306	G	A	SNP	SYDE1	ENST00000342784	human	ensembl	74_37	+1	known	missense	c.62	p.R21Q	1.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	SYDE1	HGNC	ENSG00000105137	tier1	-	-	18	0	0.00	10	5	33.33
SYDE1	0	genome.wustl.edu	37	19	15224472	15224472	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	15224472	15224472	C	T	SNP	SYDE1	ENST00000342784	human	ensembl	74_37	+1	known	missense	c.1906	p.R636W	0.946	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	SYDE1	HGNC	ENSG00000105137	tier1	-	-	51	0	0.00	29	8	21.05
SYMPK	0	genome.wustl.edu	37	19	46357678	46357678	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	46357678	46357678	C	A	SNP	SYMPK	ENST00000245934	human	ensembl	74_37	-1	known	missense	c.76	p.G26C	0.989	superfamily_ARM-type_fold	pfam_DUF3453,pfam_Symplekin_C,superfamily_ARM-type_fold	-	no_errors	SYMPK	HGNC	ENSG00000125755				29	0	0.00	28	2	6.67
SYNE1	0	genome.wustl.edu	37	6	152826487	152826487	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	152826487	152826487	G	A	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	silent	c.627	p.S209	0.157	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	36	0	0.00	17	12	41.38
SYNE2	0	genome.wustl.edu	37	14	64443352	64443352	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	64443352	64443352	G	T	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.1200	p.Q400H	0.745	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1	-	-	176	0	0.00	192	36	15.79
SYNE2	0	genome.wustl.edu	37	14	64465666	64465666	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	64465666	64465666	C	A	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.3388	p.L1130M	0.019	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1	-	-	32	0	0.00	24	4	14.29
SYNJ2	0	genome.wustl.edu	37	6	158508008	158508009	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	158508008	158508009	-	C	INS	SYNJ2	ENST00000355585	human	ensembl	74_37	+1	known	frame_shift_ins	c.3330_3331	p.P1113fs	1.000:1.000	NULL	pfam_Syja_N,pfam_DUF1866,pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ2	HGNC	ENSG00000078269	tier1			45	0	0.00	41	8	16.33
SYNPO	0	genome.wustl.edu	37	5	150028878	150028878	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	150028878	150028878	C	T	SNP	SYNPO	ENST00000394243	human	ensembl	74_37	+1	known	silent	c.1773	p.S591	0.015	NULL	NULL	-	no_errors	SYNPO	HGNC	ENSG00000171992	tier1	-	-	34	0	0.00	33	12	26.09
SYNPO2L	0	genome.wustl.edu	37	10	75406682	75406682	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	75406682	75406682	G	-	DEL	SYNPO2L	ENST00000394810	human	ensembl	74_37	-1	known	frame_shift_del	c.2728	p.R910fs	0.868	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SYNPO2L	HGNC	ENSG00000166317	tier1			103	0	0.00	77	12	13.48
SYT8	0	genome.wustl.edu	37	11	1856515	1856515	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	1856515	1856515	C	A	SNP	SYT8	ENST00000424556	human	ensembl	74_37	+1	known	missense	c.101	p.P34H	0.000	NULL	NULL	-	no_errors	SYT8	HGNC	ENSG00000149043	tier1	-	-	64	0	0.00	38	19	33.33
SZT2	0	genome.wustl.edu	37	1	43905341	43905341	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	43905341	43905341	C	-	DEL	SZT2	ENST00000562955	human	ensembl	74_37	+1	known	frame_shift_del	c.6772	p.S2260fs	0.994	NULL	NULL	-	no_errors	SZT2	HGNC	ENSG00000198198	tier1			31	0	0.00	30	4	11.76
TACC1	0	genome.wustl.edu	37	8	38677720	38677721	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	38677720	38677721	-	T	INS	TACC1	ENST00000379931	human	ensembl	74_37	+1	known	frame_shift_ins	c.958_959	p.E321fs	0.699:0.697	NULL	pfam_TACC	-	no_errors	TACC1	HGNC	ENSG00000147526	tier1			38	0	0.00	37	5	11.90
TACC3	0	genome.wustl.edu	37	4	1730307	1730308	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	1730307	1730308	-	C	INS	TACC3	ENST00000313288	human	ensembl	74_37	+1	known	frame_shift_ins	c.1178_1179	p.M396fs	0.001:0.000	NULL	pfam_TACC	-	no_errors	TACC3	HGNC	ENSG00000013810	tier1			94	0	0.00	78	17	17.89
TADA2B	0	genome.wustl.edu	37	4	7056451	7056451	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	7056451	7056451	G	A	SNP	TADA2B	ENST00000310074	human	ensembl	74_37	+1	known	silent	c.933	p.A311	0.005	pirsf_Transcriptional_adaptor_2	pfam_SANT/Myb,pfam_Znf_ZZ,superfamily_Homeodomain-like,smart_Znf_ZZ,smart_SANT/Myb,pirsf_Transcriptional_adaptor_2,pfscan_Znf_ZZ,pfscan_Myb-like_dom	-	no_errors	TADA2B	HGNC	ENSG00000173011	tier1	-	-	21	0	0.00	18	5	21.74
TAF2	0	genome.wustl.edu	37	8	120744196	120744196	+	Silent	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	120744196	120744196	T	G	SNP	TAF2	ENST00000378164	human	ensembl	74_37	-1	known	silent	c.3568	p.R1190	1.000	NULL	pfam_Peptidase_M1_N,superfamily_ARM-type_fold	-	no_errors	TAF2	HGNC	ENSG00000064313	tier1	-	-	57	0	0.00	35	20	36.36
TANC1	0	genome.wustl.edu	37	2	160076366	160076366	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	160076366	160076366	C	T	SNP	TANC1	ENST00000263635	human	ensembl	74_37	+1	known	silent	c.3666	p.G1222	0.002	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC1	HGNC	ENSG00000115183				28	0	0.00	19	2	9.52
TANC2	0	genome.wustl.edu	37	17	61482566	61482566	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	61482566	61482566	C	T	SNP	TANC2	ENST00000424789	human	ensembl	74_37	+1	known	missense	c.3193	p.R1065C	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,smart_TPR_repeat,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_Ankyrin_rpt	-	no_errors	TANC2	HGNC	ENSG00000170921				19	0	0.00	19	2	9.52
TANGO6	0	genome.wustl.edu	37	16	68894134	68894134	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	68894134	68894134	G	A	SNP	TANGO6	ENST00000261778	human	ensembl	74_37	+1	known	missense	c.442	p.V148I	0.057	NULL	pfam_DUF2435,pfam_DUF2411,superfamily_ARM-type_fold	-	no_errors	TANGO6	HGNC	ENSG00000103047	tier1	rs201171315	-	47	0	0.00	57	9	13.64
TARS	0	genome.wustl.edu	37	5	33448779	33448779	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	33448779	33448779	A	G	SNP	TARS	ENST00000265112	human	ensembl	74_37	+1	known	missense	c.271	p.K91E	1.000	pfam_TGS,superfamily_TGS-like	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_TGS,pfam_tRNA_SAD,superfamily_Thr/Ala-tRNA-synth_IIc_edit,superfamily_Anticodon-bd,superfamily_TGS-like,smart_tRNA_SAD,prints_Thr-tRNA-ligase_IIa,pfscan_aa-tRNA-synth_II,tigrfam_Thr-tRNA-ligase_IIa	-	no_errors	TARS	HGNC	ENSG00000113407	tier1	-	-	29	0	0.00	19	7	26.92
TAS2R41	0	genome.wustl.edu	37	7	143175407	143175407	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	143175407	143175407	T	-	DEL	TAS2R41	ENST00000408916	human	ensembl	74_37	+1	known	frame_shift_del	c.442	p.W150fs	0.499	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R41	HGNC	ENSG00000221855	tier1			39	0	0.00	43	8	15.69
TBC1D1	0	genome.wustl.edu	37	4	38020002	38020002	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	38020002	38020002	A	G	SNP	TBC1D1	ENST00000261439	human	ensembl	74_37	+1	known	missense	c.910	p.S304G	1.000	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_Rab-GTPase-TBC_dom,pfam_DUF3350,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D1	HGNC	ENSG00000065882	tier1	-	-	41	0	0.00	48	7	12.73
TBC1D20	0	genome.wustl.edu	37	20	416262	416262	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	416262	416262	C	T	SNP	TBC1D20	ENST00000461188	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TBC1D20	HGNC	ENSG00000125875	tier1	-	-	17	0	0.00	14	4	22.22
TBC1D20	0	genome.wustl.edu	37	20	418035	418035	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	418035	418035	T	-	DEL	TBC1D20	ENST00000461188	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TBC1D20	HGNC	ENSG00000125875	tier1			56	0	0.00	44	13	22.81
TBC1D20	0	genome.wustl.edu	37	20	418551	418551	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	418551	418551	A	-	DEL	TBC1D20	ENST00000461188	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TBC1D20	HGNC	ENSG00000125875	tier1			28	0	0.00	27	4	12.90
TBC1D21	0	genome.wustl.edu	37	15	74174063	74174063	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	74174063	74174063	C	T	SNP	TBC1D21	ENST00000300504	human	ensembl	74_37	+1	known	missense	c.247	p.R83W	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D21	HGNC	ENSG00000167139	tier1	-	-	36	0	0.00	36	11	23.40
TBC1D23	0	genome.wustl.edu	37	3	100014178	100014180	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	100014178	100014180	AAG	-	DEL	TBC1D23	ENST00000394144	human	ensembl	74_37	+1	known	in_frame_del	c.758_760	p.E255in_frame_del	1.000:1.000:1.000	superfamily_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,pfam_Rhodanese-like_dom,superfamily_Rab-GTPase-TBC_dom,superfamily_Rhodanese-like_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom,pfscan_Rhodanese-like_dom	-	no_errors	TBC1D23	HGNC	ENSG00000036054	tier1			49	0	0.00	53	8	13.11
TBC1D32	0	genome.wustl.edu	37	6	121563364	121563364	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	121563364	121563364	A	G	SNP	TBC1D32	ENST00000275159	human	ensembl	74_37	-1	putative	missense	c.2140	p.Y714H	0.995	NULL	superfamily_Rab-GTPase-TBC_dom	-	no_errors	TBC1D32	HGNC	ENSG00000146350	tier1	-	-	38	0	0.00	36	9	20.00
TBC1D3P1-DHX40P1	0	genome.wustl.edu	37	17	58066626	58066626	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	58066626	58066626	T	C	SNP	TBC1D3P1-DHX40P1	ENST00000587125	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TBC1D3P1-DHX40P1	HGNC	ENSG00000267104	tier1	-	-	40	0	0.00	57	6	9.52
TBC1D3P1-DHX40P1	0	genome.wustl.edu	37	17	58066651	58066651	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	58066651	58066651	C	T	SNP	TBC1D3P1-DHX40P1	ENST00000587125	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TBC1D3P1-DHX40P1	HGNC	ENSG00000267104	tier1	-	-	54	0	0.00	69	6	8.00
TBC1D5	0	genome.wustl.edu	37	3	17208335	17208335	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	17208335	17208335	T	C	SNP	TBC1D5	ENST00000253692	human	ensembl	74_37	-1	known	missense	c.2018	p.N673S	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D5	HGNC	ENSG00000131374	tier1	-	-	79	0	0.00	65	5	7.14
TBC1D8	0	genome.wustl.edu	37	2	101667040	101667040	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	101667040	101667040	G	A	SNP	TBC1D8	ENST00000409318	human	ensembl	74_37	-1	known	missense	c.695	p.T232M	1.000	NULL	pfam_Rab-GTPase-TBC_dom,pfam_GRAM,superfamily_Rab-GTPase-TBC_dom,smart_GRAM,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D8	HGNC	ENSG00000204634	tier1	-	-	57	0	0.00	47	9	16.07
TBC1D9B	0	genome.wustl.edu	37	5	179292737	179292737	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	179292737	179292737	C	T	SNP	TBC1D9B	ENST00000518085	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	TBC1D9B	HGNC	ENSG00000197226	tier1	-	-	45	0	0.00	40	18	31.03
TBK1	0	genome.wustl.edu	37	12	64868147	64868147	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	64868147	64868147	G	T	SNP	TBK1	ENST00000331710	human	ensembl	74_37	+1	known	silent	c.678	p.G226	0.999	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TBK1	HGNC	ENSG00000183735	tier1	-	-	59	0	0.00	51	4	7.27
TBL1XR1	0	genome.wustl.edu	37	3	176743311	176743311	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	176743311	176743311	A	C	SNP	TBL1XR1	ENST00000430069	human	ensembl	74_37	-1	known	missense	c.1520	p.V507G	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_WD40_repeat,pfam_LisH_dimerisation_subgr,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TBL1XR1	HGNC	ENSG00000177565				31	0	0.00	38	5	11.63
TCEAL2	0	genome.wustl.edu	37	X	101381878	101381878	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	101381878	101381878	C	A	SNP	TCEAL2	ENST00000329035	human	ensembl	74_37	+1	known	missense	c.76	p.H26N	0.000	NULL	pfam_TF_A-like/BEX-like	-	no_errors	TCEAL2	HGNC	ENSG00000184905	tier1	-	-	61	0	0.00	13	12	48.00
TCERG1	0	genome.wustl.edu	37	5	145883589	145883589	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	145883589	145883589	T	-	DEL	TCERG1	ENST00000509787	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TCERG1	HGNC	ENSG00000113649	tier1			42	0	0.00	29	3	9.38
TCF12	0	genome.wustl.edu	37	15	57565313	57565313	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	57565313	57565313	C	T	SNP	TCF12	ENST00000438423	human	ensembl	74_37	+1	known	missense	c.1831	p.R611C	1.000	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TCF12	HGNC	ENSG00000140262	tier1	-	-	52	0	0.00	25	6	19.35
TCF20	0	genome.wustl.edu	37	22	42564716	42564716	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	42564716	42564716	G	-	DEL	TCF20	ENST00000359486	human	ensembl	74_37	-1	known	frame_shift_del	c.5826	p.L1943fs	1.000	NULL	smart_Znf_PHD	-	no_errors	TCF20	HGNC	ENSG00000100207	tier1			51	0	0.00	47	9	16.07
TCF25	0	genome.wustl.edu	37	16	89951020	89951020	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	89951020	89951020	A	-	DEL	TCF25	ENST00000263346	human	ensembl	74_37	+1	known	frame_shift_del	c.385	p.K131fs	1.000	NULL	pfam_TCF25	-	no_errors	TCF25	HGNC	ENSG00000141002	tier1			45	0	0.00	33	12	26.67
TCF4	0	genome.wustl.edu	37	18	53302976	53302976	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	53302976	53302976	C	A	SNP	TCF4	ENST00000398339	human	ensembl	74_37	-1	known	missense	c.153	p.W51C	0.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	TCF4	HGNC	ENSG00000196628	tier1	-	-	43	0	0.00	22	11	33.33
TCHH	0	genome.wustl.edu	37	1	152080543	152080543	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	152080543	152080543	C	T	SNP	TCHH	ENST00000368804	human	ensembl	74_37	-1	known	missense	c.5150	p.R1717H	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	TCHH	HGNC	ENSG00000159450	tier1	-	-	65	0	0.00	60	4	6.25
TCHH	0	genome.wustl.edu	37	1	152085240	152085241	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	152085240	152085241	-	C	INS	TCHH	ENST00000368804	human	ensembl	74_37	-1	known	frame_shift_ins	c.453_452	p.E152fs	0.002:0.019	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	TCHH	HGNC	ENSG00000159450	tier1			35	0	0.00	32	4	11.11
TCN2	0	genome.wustl.edu	37	22	31006966	31006966	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	31006966	31006966	T	C	SNP	TCN2	ENST00000215838	human	ensembl	74_37	+1	known	missense	c.173	p.L58P	1.000	pfam_Cbl-bd_transpt_euk	pfam_Cbl-bd_transpt_euk,superfamily_Terpenoid_cyclase/PrenylTrfase	-	no_errors	TCN2	HGNC	ENSG00000185339	tier1	-	-	91	0	0.00	65	26	28.57
TCP1	0	genome.wustl.edu	37	6	160202059	160202059	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	160202059	160202059	T	A	SNP	TCP1	ENST00000321394	human	ensembl	74_37	-1	known	missense	c.881	p.D294V	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,tigrfam_Chap_CCT_alpha	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_alpha	-	no_errors	TCP1	HGNC	ENSG00000120438	tier1	-	-	61	0	0.00	52	6	10.34
TCTN1	0	genome.wustl.edu	37	12	111085086	111085086	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	111085086	111085086	C	A	SNP	TCTN1	ENST00000397659	human	ensembl	74_37	+1	known	missense	c.1580	p.P527Q	1.000	NULL	pfam_DUF1619	-	no_errors	TCTN1	HGNC	ENSG00000204852	tier1	-	-	54	0	0.00	39	22	36.07
TDP1	0	genome.wustl.edu	37	14	90485719	90485719	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	90485719	90485719	T	A	SNP	TDP1	ENST00000335725	human	ensembl	74_37	+1	known	missense	c.1601	p.I534N	1.000	pfam_Tyr-DNA_phospho	pfam_Tyr-DNA_phospho	-	no_errors	TDP1	HGNC	ENSG00000042088	tier1	-	-	48	0	0.00	48	7	12.73
TDRD3	0	genome.wustl.edu	37	13	61103042	61103042	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	61103042	61103042	T	C	SNP	TDRD3	ENST00000535286	human	ensembl	74_37	+1	known	silent	c.1683	p.G561	0.336	NULL	pfam_DUF1767,pfam_Tudor,pfam_Survival_motor_neuron,pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,smart_Tudor,pfscan_Tudor,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	TDRD3	HGNC	ENSG00000083544	tier1	-	-	75	0	0.00	62	8	11.43
TDRD6	0	genome.wustl.edu	37	6	46657580	46657580	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	46657580	46657580	G	A	SNP	TDRD6	ENST00000316081	human	ensembl	74_37	+1	known	missense	c.1715	p.R572Q	0.979	pfam_Tudor,smart_Tudor,pfscan_Tudor	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD6	HGNC	ENSG00000180113	tier1	-	-	50	0	0.00	66	18	21.43
TDRG1	0	genome.wustl.edu	37	6	40347103	40347104	+	RNA	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	40347103	40347104	-	C	INS	TDRG1	ENST00000373170	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.014:0.008	-	-	-	no_errors	TDRG1	HGNC	ENSG00000204091	tier1			47	0	0.00	47	13	21.67
TECRL	0	genome.wustl.edu	37	4	65155449	65155449	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	65155449	65155449	A	G	SNP	TECRL	ENST00000381210	human	ensembl	74_37	-1	known	silent	c.811	p.L271	0.058	pfam_3-oxo-5_a-steroid_4-DH_C,pfscan_3-oxo-5_a-steroid_4-DH_C	pfam_3-oxo-5_a-steroid_4-DH_C,pfscan_3-oxo-5_a-steroid_4-DH_C	-	no_errors	TECRL	HGNC	ENSG00000205678	tier1	-	-	41	0	0.00	37	9	19.57
TENM3	0	genome.wustl.edu	37	4	183714347	183714347	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	183714347	183714347	C	T	SNP	TENM3	ENST00000406950	human	ensembl	74_37	+1	known	silent	c.6522	p.R2174	1.000	superfamily_Cyt_c-like_dom	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Cyt_c-like_dom,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM3	HGNC	ENSG00000218336	tier1	-	-	35	0	0.00	19	7	26.92
TEPP	0	genome.wustl.edu	37	16	58010398	58010398	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	58010398	58010398	G	A	SNP	TEPP	ENST00000290871	human	ensembl	74_37	+1	known	missense	c.23	p.C8Y	0.082	NULL	NULL	-	no_errors	TEPP	HGNC	ENSG00000159648	tier1	-	-	67	0	0.00	39	7	15.22
TET2	0	genome.wustl.edu	37	4	106164884	106164884	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	106164884	106164884	C	T	SNP	TET2	ENST00000380013	human	ensembl	74_37	+1	known	missense	c.3752	p.T1251M	0.099	NULL	NULL	-	no_errors	TET2	HGNC	ENSG00000168769	tier1	-	-	46	0	0.00	29	10	25.64
TET2	0	genome.wustl.edu	37	4	106196910	106196910	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	106196910	106196910	A	G	SNP	TET2	ENST00000380013	human	ensembl	74_37	+1	known	missense	c.5243	p.N1748S	0.002	NULL	NULL	-	no_errors	TET2	HGNC	ENSG00000168769	tier1	-	-	15	0	0.00	15	4	21.05
TEX15	0	genome.wustl.edu	37	8	30701437	30701437	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	30701437	30701437	T	C	SNP	TEX15	ENST00000256246	human	ensembl	74_37	-1	known	silent	c.5097	p.T1699	0.951	NULL	NULL	-	no_errors	TEX15	HGNC	ENSG00000133863	tier1	-	-	61	0	0.00	54	4	6.90
TFB1M	0	genome.wustl.edu	37	6	155581483	155581483	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	155581483	155581483	G	T	SNP	TFB1M	ENST00000367166	human	ensembl	74_37	-1	known	missense	c.718	p.Q240K	1.000	pfam_rRNA_Ade_methylase_transferase	pfam_rRNA_Ade_methylase_transferase,smart_rRNA_Ade_methylase_Trfase_N	-	no_errors	TFB1M	HGNC	ENSG00000029639	tier1	-	-	73	0	0.00	77	5	6.10
TFDP2	0	genome.wustl.edu	37	3	141697454	141697454	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	141697454	141697454	C	T	SNP	TFDP2	ENST00000489671	human	ensembl	74_37	-1	known	missense	c.427	p.V143I	1.000	pfam_E2F_TDP,pirsf_Transcrpt_fac_DP	pfam_Transc_factor_DP_C,pfam_E2F_TDP,pirsf_Transcrpt_fac_DP	-	no_errors	TFDP2	HGNC	ENSG00000114126	tier1	-	-	71	0	0.00	55	8	12.70
TGFBR2	0	genome.wustl.edu	37	3	30691872	30691872	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	30691872	30691872	A	-	DEL	TGFBR2	ENST00000359013	human	ensembl	74_37	+1	known	frame_shift_del	c.449	p.K153fs	1.000	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,prints_TGFB_receptor	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_TGFB_receptor,pfscan_Prot_kinase_dom	-	no_errors	TGFBR2	HGNC	ENSG00000163513	tier1			51	0	0.00	41	15	26.79
TGM3	0	genome.wustl.edu	37	20	2312875	2312875	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	2312875	2312875	G	A	SNP	TGM3	ENST00000381458	human	ensembl	74_37	+1	known	missense	c.1561	p.A521T	0.993	pfam_Transglutaminase_C,superfamily_Transglutaminase_C	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM3	HGNC	ENSG00000125780	tier1	-	-	34	0	0.00	29	7	19.44
TH	0	genome.wustl.edu	37	11	2189810	2189810	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	2189810	2189810	C	T	SNP	TH	ENST00000381178	human	ensembl	74_37	-1	known	missense	c.491	p.R164H	1.000	pirsf_Tyrosine_3-monooxygenase-like,tigrfam_Tyr_3_mOase	pfam_Aromatic-AA_hydroxylase_C,pfam_Tyrosine_hydroxylase_CS,superfamily_Aromatic-AA_hydroxylase_C,pirsf_Tyrosine_3-monooxygenase-like,prints_Aromatic-AA_hydroxylase_C,tigrfam_Tyr_3_mOase	-	no_errors	TH	HGNC	ENSG00000180176	tier1	-	-	56	0	0.00	26	12	31.58
THAP7	0	genome.wustl.edu	37	22	21355663	21355663	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	21355663	21355663	G	A	SNP	THAP7	ENST00000215742	human	ensembl	74_37	-1	known	silent	c.118	p.L40	1.000	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	pfam_Znf_C2CH,smart_Znf_C2CH,pfscan_Znf_C2CH	-	no_errors	THAP7	HGNC	ENSG00000184436	tier1	-	-	89	0	0.00	53	24	30.77
THBS2	0	genome.wustl.edu	37	6	169634947	169634947	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	169634947	169634947	G	A	SNP	THBS2	ENST00000366787	human	ensembl	74_37	-1	known	silent	c.1533	p.A511	0.252	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS2	HGNC	ENSG00000186340	tier1	-	-	71	0	0.00	65	11	14.47
THBS2	0	genome.wustl.edu	37	6	169639773	169639773	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	169639773	169639773	G	A	SNP	THBS2	ENST00000366787	human	ensembl	74_37	-1	known	silent	c.1050	p.C350	1.000	pfam_VWF_C,smart_VWF_C,pfscan_VWF_C	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS2	HGNC	ENSG00000186340	tier1	-	-	34	0	0.00	23	4	14.81
THBS3	0	genome.wustl.edu	37	1	155167348	155167348	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	155167348	155167348	C	T	SNP	THBS3	ENST00000368378	human	ensembl	74_37	-1	known	missense	c.2405	p.G802D	1.000	pfam_Thrombospondin_C,superfamily_ConA-like_lec_gl_sf	pfam_Thrombospondin_C,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	THBS3	HGNC	ENSG00000169231	tier1	-	-	41	0	0.00	18	4	18.18
THRA	0	genome.wustl.edu	37	17	38244561	38244561	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	38244561	38244561	G	A	SNP	THRA	ENST00000264637	human	ensembl	74_37	+1	known	missense	c.790	p.A264T	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_ThyrH_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	THRA	HGNC	ENSG00000126351	tier1	-	-	51	0	0.00	44	8	15.38
TICRR	0	genome.wustl.edu	37	15	90163024	90163024	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	90163024	90163024	G	A	SNP	TICRR	ENST00000268138	human	ensembl	74_37	+1	known	silent	c.3105	p.P1035	0.001	NULL	NULL	-	no_errors	TICRR	HGNC	ENSG00000140534	tier1	-	-	67	0	0.00	40	7	14.89
TIE1	0	genome.wustl.edu	37	1	43770890	43770890	+	RNA	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	43770890	43770890	C	A	SNP	TIE1	ENST00000485125	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	TIE1	HGNC	ENSG00000066056	tier1	-	-	69	0	0.00	59	15	20.27
TIGD2	0	genome.wustl.edu	37	4	90034766	90034766	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	90034766	90034766	G	A	SNP	TIGD2	ENST00000317005	human	ensembl	74_37	+1	known	missense	c.641	p.C214Y	1.000	pfam_DDE_SF_endonuclease_CENPB-like	pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_CenpB_DNA-bd_dom,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD2	HGNC	ENSG00000180346				49	0	0.00	26	4	13.33
TLCD1	0	genome.wustl.edu	37	17	27051859	27051859	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	27051859	27051859	C	-	DEL	TLCD1	ENST00000292090	human	ensembl	74_37	-1	known	frame_shift_del	c.413	p.G138fs	0.737	pfam_TLC-dom,smart_TLC-dom,pfscan_TLC-dom	pfam_TLC-dom,smart_TLC-dom,pfscan_TLC-dom	-	no_errors	TLCD1	HGNC	ENSG00000160606	tier1			31	0	0.00	22	6	21.43
TLE2	0	genome.wustl.edu	37	19	3019732	3019732	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	3019732	3019732	G	T	SNP	TLE2	ENST00000262953	human	ensembl	74_37	-1	known	missense	c.334	p.Q112K	1.000	pfam_Groucho/TLE_N	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_Groucho_enhance,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TLE2	HGNC	ENSG00000065717	tier1	-	-	166	0	0.00	136	10	6.85
TLX3	0	genome.wustl.edu	37	5	170736463	170736463	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	170736463	170736463	G	T	SNP	TLX3	ENST00000296921	human	ensembl	74_37	+1	known	missense	c.94	p.A32S	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	TLX3	HGNC	ENSG00000164438	tier1	-	-	24	0	0.00	12	4	25.00
TM9SF4	0	genome.wustl.edu	37	20	30730863	30730863	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	30730863	30730863	C	T	SNP	TM9SF4	ENST00000398022	human	ensembl	74_37	+1	known	missense	c.607	p.R203C	1.000	pfam_EMP70	pfam_EMP70	-	no_errors	TM9SF4	HGNC	ENSG00000101337	tier1	rs199761347	-	52	0	0.00	40	9	18.00
TMC2	0	genome.wustl.edu	37	20	2621828	2621828	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	2621828	2621828	C	T	SNP	TMC2	ENST00000358864	human	ensembl	74_37	+1	known	missense	c.2552	p.A851V	0.030	NULL	pfam_TMC	-	no_errors	TMC2	HGNC	ENSG00000149488	tier1	-	-	67	0	0.00	60	8	11.76
TMC4	0	genome.wustl.edu	37	19	54668189	54668189	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	54668189	54668189	C	T	SNP	TMC4	ENST00000301187	human	ensembl	74_37	-1	known	silent	c.1092	p.T364	0.000	NULL	pfam_TMC	-	no_errors	TMC4	HGNC	ENSG00000167608	tier1	-	-	94	0	0.00	58	28	32.56
TMC8	0	genome.wustl.edu	37	17	76135299	76135299	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	76135299	76135299	G	T	SNP	TMC8	ENST00000318430	human	ensembl	74_37	+1	known	missense	c.1880	p.R627M	0.139	NULL	pfam_TMC	-	no_errors	TMC8	HGNC	ENSG00000167895	tier1	-	-	30	0	0.00	21	17	44.74
TMCC2	0	genome.wustl.edu	37	1	205211075	205211075	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	205211075	205211075	G	A	SNP	TMCC2	ENST00000358024	human	ensembl	74_37	+1	known	missense	c.650	p.R217H	0.997	NULL	pfam_Predicted_TM_coiled-coil_2,superfamily_t-SNARE	-	no_errors	TMCC2	HGNC	ENSG00000133069	tier1	-	-	21	0	0.00	10	10	50.00
TMEFF2	0	genome.wustl.edu	37	2	193049181	193049181	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	193049181	193049181	C	T	SNP	TMEFF2	ENST00000272771	human	ensembl	74_37	-1	known	missense	c.311	p.G104D	1.000	pfam_Kazal_dom,smart_Kazal_dom	pfam_Kazal_dom,smart_Kazal_dom,pfscan_EG-like_dom	-	no_errors	TMEFF2	HGNC	ENSG00000144339	tier1	-	-	42	0	0.00	34	5	12.82
TMEM121	0	genome.wustl.edu	37	14	105995579	105995579	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	105995579	105995579	C	T	SNP	TMEM121	ENST00000392519	human	ensembl	74_37	+1	known	silent	c.408	p.Y136	0.998	NULL	NULL	-	no_errors	TMEM121	HGNC	ENSG00000184986	tier1	-	-	79	0	0.00	49	5	9.26
TMEM129	0	genome.wustl.edu	37	4	1719363	1719363	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	1719363	1719363	G	T	SNP	TMEM129	ENST00000382936	human	ensembl	74_37	-1	known	silent	c.720	p.L240	0.988	pfam_Tmpp129	pfam_Tmpp129	-	no_errors	TMEM129	HGNC	ENSG00000168936	tier1	-	-	29	0	0.00	24	5	17.24
TMEM131	0	genome.wustl.edu	37	2	98543889	98543889	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	98543889	98543889	C	A	SNP	TMEM131	ENST00000186436	human	ensembl	74_37	-1	known	missense	c.249	p.Q83H	1.000	NULL	pfam_DUF3651_TMEM131	-	no_errors	TMEM131	HGNC	ENSG00000075568	tier1	-	-	63	0	0.00	46	6	11.54
TMEM132B	0	genome.wustl.edu	37	12	126128809	126128809	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	126128809	126128809	C	T	SNP	TMEM132B	ENST00000299308	human	ensembl	74_37	+1	known	missense	c.1610	p.P537L	1.000	NULL	NULL	-	no_errors	TMEM132B	HGNC	ENSG00000139364	tier1	-	-	64	0	0.00	58	19	24.68
TMEM132C	0	genome.wustl.edu	37	12	129181916	129181916	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	129181916	129181916	A	C	SNP	TMEM132C	ENST00000435159	human	ensembl	74_37	+1	known	missense	c.2077	p.T693P	0.928	NULL	NULL	-	no_errors	TMEM132C	HGNC	ENSG00000181234	tier1	-	-	36	0	0.00	21	11	34.38
TMEM132C	0	genome.wustl.edu	37	12	129189895	129189895	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	129189895	129189895	C	T	SNP	TMEM132C	ENST00000435159	human	ensembl	74_37	+1	known	silent	c.2382	p.N794	0.003	NULL	NULL	-	no_errors	TMEM132C	HGNC	ENSG00000181234	tier1	-	-	31	0	0.00	41	14	25.45
TMEM132D	0	genome.wustl.edu	37	12	130184428	130184428	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	130184428	130184428	C	T	SNP	TMEM132D	ENST00000422113	human	ensembl	74_37	-1	known	missense	c.895	p.V299M	0.014	NULL	NULL	-	no_errors	TMEM132D	HGNC	ENSG00000151952				50	0	0.00	38	6	13.64
TMEM184A	0	genome.wustl.edu	37	7	1585319	1585319	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	1585319	1585319	G	-	DEL	TMEM184A	ENST00000421996	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	TMEM184A	HGNC	ENSG00000164855	tier1			16	0	0.00	18	6	25.00
TMEM184C	0	genome.wustl.edu	37	4	148550763	148550764	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	148550763	148550764	-	T	INS	TMEM184C	ENST00000296582	human	ensembl	74_37	+1	known	frame_shift_ins	c.586_587	p.G197fs	0.015:0.026	pfam_Ost-alpha	pfam_Ost-alpha	-	no_errors	TMEM184C	HGNC	ENSG00000164168	tier1			75	0	0.00	51	18	26.09
TMEM186	0	genome.wustl.edu	37	16	8889941	8889941	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	8889941	8889941	C	T	SNP	TMEM186	ENST00000333050	human	ensembl	74_37	-1	known	silent	c.510	p.R170	0.000	NULL	NULL	-	no_errors	TMEM186	HGNC	ENSG00000184857	tier1	-	-	74	0	0.00	80	19	19.19
TMEM191A	0	genome.wustl.edu	37	22	21058315	21058315	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	21058315	21058315	C	T	SNP	TMEM191A	ENST00000419950	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TMEM191A	HGNC	ENSG00000226287	tier1	-	-	77	0	0.00	105	9	7.89
TMEM194B	0	genome.wustl.edu	37	2	191382316	191382316	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	191382316	191382316	G	A	SNP	TMEM194B	ENST00000409150	human	ensembl	74_37	-1	known	missense	c.542	p.S181L	0.009	pfam_TMEM194	pfam_TMEM194	-	no_errors	TMEM194B	HGNC	ENSG00000189362	tier1	-	-	59	0	0.00	44	8	15.38
TMEM200B	0	genome.wustl.edu	37	1	29447700	29447700	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	29447700	29447700	C	T	SNP	TMEM200B	ENST00000420504	human	ensembl	74_37	-1	known	missense	c.641	p.R214H	0.998	NULL	pfam_DUF2371_TMEM200	-	no_errors	TMEM200B	HGNC	ENSG00000253304	tier1	-	-	53	0	0.00	23	12	34.29
TMEM229B	0	genome.wustl.edu	37	14	67940219	67940219	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	67940219	67940219	C	T	SNP	TMEM229B	ENST00000357461	human	ensembl	74_37	-1	known	missense	c.422	p.R141H	1.000	NULL	pfam_DUF1113_TMEM229	-	no_errors	TMEM229B	HGNC	ENSG00000198133	tier1	-	-	69	0	0.00	45	13	22.41
TMEM232	0	genome.wustl.edu	37	5	109940905	109940905	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	109940905	109940905	T	-	DEL	TMEM232	ENST00000429839	human	ensembl	74_37	-1	known	frame_shift_del	c.1181	p.N394fs	0.000	NULL	NULL	-	no_errors	TMEM232	HGNC	ENSG00000186952	tier1			71	0	0.00	47	9	16.07
TMEM246	0	genome.wustl.edu	37	9	104238840	104238840	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	104238840	104238840	G	A	SNP	TMEM246	ENST00000374847	human	ensembl	74_37	-1	known	missense	c.535	p.P179S	1.000	NULL	NULL	-	no_errors	TMEM246	HGNC	ENSG00000165152	tier1	-	-	53	0	0.00	34	4	10.53
TMEM254	0	genome.wustl.edu	37	10	81850719	81850719	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	81850719	81850719	T	-	DEL	TMEM254	ENST00000463029	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.071	-	-	-	no_errors	TMEM254	HGNC	ENSG00000133678	tier1			67	0	0.00	41	13	24.07
TMEM52B	0	genome.wustl.edu	37	12	10342726	10342726	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	10342726	10342726	A	G	SNP	TMEM52B	ENST00000381923	human	ensembl	74_37	+1	known	missense	c.539	p.D180G	0.000	NULL	NULL	-	no_errors	TMEM52B	HGNC	ENSG00000165685	tier1	-	-	33	0	0.00	47	15	24.19
TMEM59	0	genome.wustl.edu	37	1	54502396	54502396	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	54502396	54502396	A	-	DEL	TMEM59	ENST00000470395	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TMEM59	HGNC	ENSG00000116209	tier1			27	0	0.00	19	5	20.83
TMEM63A	0	genome.wustl.edu	37	1	226040372	226040372	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	226040372	226040372	C	T	SNP	TMEM63A	ENST00000366835	human	ensembl	74_37	-1	known	silent	c.1896	p.A632	0.912	pfam_DUF221	pfam_DUF221	-	no_errors	TMEM63A	HGNC	ENSG00000196187	tier1	-	-	40	0	0.00	41	5	10.87
TMEM63A	0	genome.wustl.edu	37	1	226053805	226053805	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	226053805	226053805	G	-	DEL	TMEM63A	ENST00000474478	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TMEM63A	HGNC	ENSG00000196187	tier1			23	0	0.00	25	4	13.79
TMEM63C	0	genome.wustl.edu	37	14	77719651	77719653	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	77719651	77719653	GAG	-	DEL	TMEM63C	ENST00000298351	human	ensembl	74_37	+1	known	in_frame_del	c.2152_2154	p.E721in_frame_del	0.827:0.901:0.910	NULL	pfam_DUF221	-	no_errors	TMEM63C	HGNC	ENSG00000165548	tier1			33	0	0.00	39	6	13.33
TMEM69	0	genome.wustl.edu	37	1	46158997	46158997	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	46158997	46158997	C	T	SNP	TMEM69	ENST00000372025	human	ensembl	74_37	+1	known	missense	c.164	p.P55L	0.899	NULL	pfam_DUF3429	-	no_errors	TMEM69	HGNC	ENSG00000159596	tier1	-	-	39	0	0.00	47	4	7.84
TMEM95	0	genome.wustl.edu	37	17	7259514	7259514	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	7259514	7259514	G	-	DEL	TMEM95	ENST00000330767	human	ensembl	74_37	+1	known	frame_shift_del	c.352	p.G119fs	1.000	NULL	NULL	-	no_errors	TMEM95	HGNC	ENSG00000182896	tier1			25	0	0.00	19	4	17.39
TMEM97	0	genome.wustl.edu	37	17	26653807	26653807	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	26653807	26653807	A	-	DEL	TMEM97	ENST00000226230	human	ensembl	74_37	+1	known	frame_shift_del	c.519	p.K176fs	1.000	pirsf_Transmembrane_6/97	pfam_Transmembrane_6/97,pirsf_Transmembrane_6/97	-	no_errors	TMEM97	HGNC	ENSG00000109084	tier1			21	0	0.00	9	7	43.75
TMPRSS11A	0	genome.wustl.edu	37	4	68780360	68780360	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	68780360	68780360	T	C	SNP	TMPRSS11A	ENST00000334830	human	ensembl	74_37	-1	known	missense	c.1050	p.I350M	0.994	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pirsf_Pept_S1A_HAT/DESC1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_SEA_dom,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pirsf_Pept_S1A_HAT/DESC1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS11A	HGNC	ENSG00000187054	tier1	-	-	68	0	0.00	45	17	27.42
TMPRSS12	0	genome.wustl.edu	37	12	51252715	51252715	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	51252715	51252715	A	-	DEL	TMPRSS12	ENST00000398458	human	ensembl	74_37	+1	known	frame_shift_del	c.531	p.A180fs	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS12	HGNC	ENSG00000186452	tier1			65	0	0.00	50	21	29.58
TMPRSS4	0	genome.wustl.edu	37	11	117985923	117985923	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	117985923	117985923	T	A	SNP	TMPRSS4	ENST00000437212	human	ensembl	74_37	+1	known	missense	c.1080	p.D360E	0.120	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,pfam_LDrepeatLR_classA_rpt,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS4	HGNC	ENSG00000137648	tier1	-	-	49	0	0.00	53	4	7.02
TMPRSS7	0	genome.wustl.edu	37	3	111764731	111764731	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	111764731	111764731	G	A	SNP	TMPRSS7	ENST00000419127	human	ensembl	74_37	+1	known	missense	c.293	p.R98Q	1.000	NULL	pfam_Peptidase_S1,pfam_SEA_dom,pfam_LDrepeatLR_classA_rpt,pfam_CUB_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_CUB_dom,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt	-	no_errors	TMPRSS7	HGNC	ENSG00000176040	tier1	-	-	128	0	0.00	102	34	24.82
TMPRSS9	0	genome.wustl.edu	37	19	2405411	2405411	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	2405411	2405411	T	C	SNP	TMPRSS9	ENST00000332578	human	ensembl	74_37	+1	known	missense	c.608	p.I203T	0.999	pirsf_Pept_S1A_polyserase-1,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_LDrepeatLR_classA_rpt,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Pept_S1A_polyserase-1,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,pfam_LDrepeatLR_classA_rpt,superfamily_Trypsin-like_Pept_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1	-	no_errors	TMPRSS9	HGNC	ENSG00000178297	tier1	-	-	66	0	0.00	38	11	22.45
TMTC1	0	genome.wustl.edu	37	12	29670503	29670503	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	29670503	29670503	C	T	SNP	TMTC1	ENST00000256062	human	ensembl	74_37	-1	known	missense	c.1702	p.A568T	1.000	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,pfam_DUF1736,pfam_PIK-rel_kinase_FAT,pfam_TPR-3,smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC1	HGNC	ENSG00000133687	tier1	-	-	31	0	0.00	23	6	20.00
TNFRSF12A	0	genome.wustl.edu	37	16	3071775	3071775	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	3071775	3071775	C	T	SNP	TNFRSF12A	ENST00000326577	human	ensembl	74_37	+1	known	missense	c.338	p.P113L	1.000	pfam_TNFR_12,prints_TNFR_12	pfam_TNFR_12,prints_TNFR_12	-	no_errors	TNFRSF12A	HGNC	ENSG00000006327	tier1	-	-	62	0	0.00	48	8	14.29
TNFRSF8	0	genome.wustl.edu	37	1	12195644	12195644	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	12195644	12195644	G	T	SNP	TNFRSF8	ENST00000263932	human	ensembl	74_37	+1	known	splice_site	c.1310-1	e13-1	1.000	-	-	-	no_errors	TNFRSF8	HGNC	ENSG00000120949	tier1	-	-	163	0	0.00	121	15	11.03
TNFSF12	0	genome.wustl.edu	37	17	7460641	7460641	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	7460641	7460641	T	C	SNP	TNFSF12	ENST00000293825	human	ensembl	74_37	+1	known	missense	c.724	p.Y242H	1.000	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom	-	no_errors	TNFSF12	HGNC	ENSG00000239697	tier1	-	-	13	0	0.00	11	5	31.25
TNFSF8	0	genome.wustl.edu	37	9	117692515	117692515	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	117692515	117692515	C	T	SNP	TNFSF8	ENST00000223795	human	ensembl	74_37	-1	known	silent	c.69	p.P23	0.000	pirsf_TNF_CD30_ligand_type	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pirsf_TNF_CD30_ligand_type,pfscan_TNF_dom	-	no_errors	TNFSF8	HGNC	ENSG00000106952				58	0	0.00	42	4	8.70
TNFSF9	0	genome.wustl.edu	37	19	6531149	6531151	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	6531149	6531151	GCT	0	DEL	TNFSF9	ENST00000245817	human	ensembl	74_37	+1	known	in_frame_del	c.102_104	p.L38in_frame_del	0.039:0.043:0.048	NULL	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom	-	no_errors	TNFSF9	HGNC	ENSG00000125657				20	0	0.00	7	2	22.22
TNRC6B	0	genome.wustl.edu	37	22	40657941	40657941	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	40657941	40657941	C	T	SNP	TNRC6B	ENST00000454349	human	ensembl	74_37	+1	known	missense	c.221	p.A74V	1.000	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6B	HGNC	ENSG00000100354	tier1	-	-	143	0	0.00	144	18	11.11
TNS3	0	genome.wustl.edu	37	7	47408140	47408140	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	47408140	47408140	C	T	SNP	TNS3	ENST00000311160	human	ensembl	74_37	-1	known	silent	c.2103	p.Q701	1.000	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS3	HGNC	ENSG00000136205	tier1	-	-	77	0	0.00	59	8	11.94
TNXB	0	genome.wustl.edu	37	6	32010327	32010327	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	32010327	32010327	C	T	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.12109	p.G4037S	0.000	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	tier1	-	-	55	0	0.00	45	15	24.59
TNXB	0	genome.wustl.edu	37	6	32030199	32030199	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	32030199	32030199	G	-	DEL	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	frame_shift_del	c.6903	p.I2302fs	0.002	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	tier1			60	0	0.00	48	11	18.64
TOP3B	0	genome.wustl.edu	37	22	22318305	22318305	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	22318305	22318305	C	A	SNP	TOP3B	ENST00000357179	human	ensembl	74_37	-1	known	missense	c.1194	p.E398D	0.997	pfam_Topo_IA_cen,superfamily_Topo_IA_core_domain,smart_Topo_IA_DNA-bd	pfam_Topo_IA_cen,pfam_Toprim_domain,superfamily_Topo_IA_core_domain,smart_Toprim_domain,smart_Topo_IA_2,smart_Topo_IA_DNA-bd,prints_Topo_IA	-	no_errors	TOP3B	HGNC	ENSG00000100038	tier1	-	-	23	0	0.00	11	8	42.11
TOPBP1	0	genome.wustl.edu	37	3	133331322	133331322	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	133331322	133331322	C	T	SNP	TOPBP1	ENST00000260810	human	ensembl	74_37	-1	known	missense	c.3946	p.E1316K	1.000	pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	pfam_BRCT_dom,superfamily_BRCT_dom,superfamily_Secretoglobin,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TOPBP1	HGNC	ENSG00000163781	tier1	-	-	23	0	0.00	15	5	25.00
TP53BP1	0	genome.wustl.edu	37	15	43748969	43748969	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	43748969	43748969	C	A	SNP	TP53BP1	ENST00000382044	human	ensembl	74_37	-1	known	nonsense	c.1837	p.E613*	1.000	NULL	pfam_53-BP1_Tudor,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	TP53BP1	HGNC	ENSG00000067369	tier1	-	-	40	0	0.00	46	13	22.03
TP53INP1	0	genome.wustl.edu	37	8	95952411	95952411	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	95952411	95952411	T	C	SNP	TP53INP1	ENST00000342697	human	ensembl	74_37	-1	known	silent	c.150	p.E50	0.009	NULL	NULL	-	no_errors	TP53INP1	HGNC	ENSG00000164938	tier1	-	-	44	0	0.00	26	21	44.68
TPO	0	genome.wustl.edu	37	2	1442587	1442587	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	1442587	1442587	G	T	SNP	TPO	ENST00000539820	human	ensembl	74_37	+1	known	splice_site	c.483-1	e5-1	0.241	-	-	-	no_errors	TPO	HGNC	ENSG00000115705	tier1	-	-	59	0	0.00	48	13	19.12
TPR	0	genome.wustl.edu	37	1	186312523	186312523	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	186312523	186312523	C	A	SNP	TPR	ENST00000367478	human	ensembl	74_37	-1	known	nonsense	c.3685	p.E1229*	1.000	NULL	pfam_TPR_MLP1_2,superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	TPR	HGNC	ENSG00000047410	tier1	-	-	44	0	0.00	36	8	18.18
TPSD1	0	genome.wustl.edu	37	16	1306980	1306980	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	1306980	1306980	C	T	SNP	TPSD1	ENST00000211076	human	ensembl	74_37	+1	known	missense	c.437	p.T146M	0.514	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	TPSD1	HGNC	ENSG00000095917	tier1	rs144003164	-	65	0	0.00	61	18	22.78
TRAF3IP1	0	genome.wustl.edu	37	2	239237829	239237830	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	239237829	239237830	-	G	INS	TRAF3IP1	ENST00000373327	human	ensembl	74_37	+1	known	frame_shift_ins	c.761_762	p.K257fs	0.045:0.019	NULL	NULL	-	no_errors	TRAF3IP1	HGNC	ENSG00000204104	tier1			41	0	0.00	31	12	27.91
TRAK1	0	genome.wustl.edu	37	3	42166922	42166922	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	42166922	42166922	C	T	SNP	TRAK1	ENST00000327628	human	ensembl	74_37	+1	putative	silent	c.102	p.N34	1.000	NULL	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	-	no_errors	TRAK1	HGNC	ENSG00000182606	tier1	-	-	61	0	0.00	54	4	6.90
TRAPPC10	0	genome.wustl.edu	37	21	45502962	45502962	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	45502962	45502962	G	A	SNP	TRAPPC10	ENST00000291574	human	ensembl	74_37	+1	known	missense	c.2017	p.A673T	0.067	NULL	NULL	-	no_errors	TRAPPC10	HGNC	ENSG00000160218	tier1	-	-	34	0	0.00	16	8	33.33
TRAPPC11	0	genome.wustl.edu	37	4	184605469	184605469	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	184605469	184605469	G	T	SNP	TRAPPC11	ENST00000334690	human	ensembl	74_37	+1	known	nonsense	c.1378	p.G460*	1.000	pfam_Foie-gras_1	pfam_Foie-gras_1,pfam_DUF1683_C	-	no_errors	TRAPPC11	HGNC	ENSG00000168538	tier1	-	-	32	0	0.00	38	6	13.64
TRAPPC8	0	genome.wustl.edu	37	18	29453418	29453418	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	29453418	29453418	A	-	DEL	TRAPPC8	ENST00000283351	human	ensembl	74_37	-1	known	frame_shift_del	c.2037	p.F679fs	1.000	NULL	NULL	-	no_errors	TRAPPC8	HGNC	ENSG00000153339	tier1			54	0	0.00	26	12	31.58
TRHDE-AS1	0	genome.wustl.edu	37	12	72665950	72665950	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	72665950	72665950	G	-	DEL	TRHDE-AS1	ENST00000435350	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	TRHDE-AS1	HGNC	ENSG00000236333	tier1			172	0	0.00	124	36	22.50
TRIM10	0	genome.wustl.edu	37	6	30128469	30128469	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	30128469	30128469	G	A	SNP	TRIM10	ENST00000449742	human	ensembl	74_37	-1	known	missense	c.167	p.T56I	0.007	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM10	HGNC	ENSG00000204613	tier1	-	-	69	0	0.00	35	17	32.69
TRIM22	0	genome.wustl.edu	37	11	5719674	5719674	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	5719674	5719674	G	A	SNP	TRIM22	ENST00000379965	human	ensembl	74_37	+1	known	missense	c.649	p.A217T	0.030	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM22	HGNC	ENSG00000132274				47	0	0.00	51	3	5.56
TRIM4	0	genome.wustl.edu	37	7	99489839	99489839	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	99489839	99489839	A	-	DEL	TRIM4	ENST00000355947	human	ensembl	74_37	-1	known	frame_shift_del	c.1450	p.W484fs	0.987	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM4	HGNC	ENSG00000146833	tier1			20	0	0.00	15	5	25.00
TRIM43	0	genome.wustl.edu	37	2	96262110	96262110	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	96262110	96262110	G	T	SNP	TRIM43	ENST00000272395	human	ensembl	74_37	+1	known	missense	c.668	p.S223I	0.001	NULL	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM43	HGNC	ENSG00000144015	tier1	-	-	130	0	0.00	110	8	6.78
TRIM46	0	genome.wustl.edu	37	1	155156330	155156330	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	155156330	155156330	G	A	SNP	TRIM46	ENST00000334634	human	ensembl	74_37	+1	known	silent	c.1944	p.S648	0.370	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box	-	no_errors	TRIM46	HGNC	ENSG00000163462	tier1	-	-	57	0	0.00	30	9	23.08
TRIM7	0	genome.wustl.edu	37	5	180630477	180630477	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	180630477	180630477	C	T	SNP	TRIM7	ENST00000509199	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	TRIM7	HGNC	ENSG00000146054	tier1	-	-	38	0	0.00	20	5	20.00
TRIM77	0	genome.wustl.edu	37	11	89447424	89447424	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	89447424	89447424	G	A	SNP	TRIM77	ENST00000398290	human	ensembl	74_37	+1	known	missense	c.572	p.R191H	0.006	NULL	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM77	HGNC	ENSG00000214414	tier1	-	-	41	0	0.00	30	7	18.92
TRIM9	0	genome.wustl.edu	37	14	51475876	51475876	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	51475876	51475876	T	G	SNP	TRIM9	ENST00000338969	human	ensembl	74_37	-1	known	missense	c.1228	p.T410P	1.000	NULL	pfam_SPRY_rcpt,pfam_Fibronectin_type3,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM9	HGNC	ENSG00000100505				46	0	0.00	42	3	6.67
TRIO	0	genome.wustl.edu	37	5	14368970	14368970	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	14368970	14368970	G	A	SNP	TRIO	ENST00000344204	human	ensembl	74_37	+1	known	missense	c.3028	p.V1010I	1.000	smart_Spectrin/alpha-actinin	pfam_DH-domain,pfam_Prot_kinase_dom,pfam_Spectrin_repeat,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_SH3_domain,superfamily_CRAL-TRIO_dom,superfamily_Capsid/spike_ssDNA_virus,smart_CRAL-TRIO_dom,smart_Spectrin/alpha-actinin,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_CRAL-TRIO_dom,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	TRIO	HGNC	ENSG00000038382	tier1	-	-	52	0	0.00	46	8	14.81
TRIOBP	0	genome.wustl.edu	37	22	38122337	38122337	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	38122337	38122337	C	T	SNP	TRIOBP	ENST00000406386	human	ensembl	74_37	+1	known	silent	c.3774	p.P1258	0.068	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	TRIOBP	HGNC	ENSG00000100106	tier1	-	-	86	0	0.00	65	13	16.67
TRIOBP	0	genome.wustl.edu	37	22	38129304	38129304	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	38129304	38129304	G	T	SNP	TRIOBP	ENST00000406386	human	ensembl	74_37	+1	known	splice_site	c.3948-1	e6-1	1.000	-	-	-	no_errors	TRIOBP	HGNC	ENSG00000100106	tier1	-	-	83	0	0.00	66	14	17.50
TRMT44	0	genome.wustl.edu	37	4	8480090	8480090	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	8480090	8480090	T	C	SNP	TRMT44	ENST00000511366	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	TRMT44	HGNC	ENSG00000155275	tier1	-	-	20	0	0.00	22	7	24.14
TRPC3	0	genome.wustl.edu	37	4	122854046	122854046	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	122854046	122854046	C	T	SNP	TRPC3	ENST00000379645	human	ensembl	74_37	-1	known	missense	c.367	p.G123S	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPC3_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC3	HGNC	ENSG00000138741	tier1	-	-	59	0	0.00	42	11	20.75
TRPC3	0	genome.wustl.edu	37	4	122854153	122854153	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	122854153	122854153	C	T	SNP	TRPC3	ENST00000379645	human	ensembl	74_37	-1	known	missense	c.260	p.R87Q	1.000	NULL	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPC3_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC3	HGNC	ENSG00000138741				24	0	0.00	32	4	11.11
TRPS1	0	genome.wustl.edu	37	8	116617171	116617171	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	116617171	116617171	T	C	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	missense	c.1025	p.N342S	1.000	NULL	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447	tier1	-	-	42	0	0.00	55	8	12.70
TRPS1	0	genome.wustl.edu	37	8	116631988	116631988	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	116631988	116631988	A	C	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	missense	c.337	p.F113V	0.994	NULL	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447	tier1	-	-	37	0	0.00	43	7	14.00
TRPS1	0	genome.wustl.edu	37	8	116632237	116632237	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	116632237	116632237	C	T	SNP	TRPS1	ENST00000395715	human	ensembl	74_37	-1	known	missense	c.88	p.E30K	1.000	NULL	pfam_Znf_GATA,smart_Znf_C2H2-like,smart_Znf_GATA,pfscan_Znf_C2H2,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	TRPS1	HGNC	ENSG00000104447				52	0	0.00	65	4	5.80
TRPV1	0	genome.wustl.edu	37	17	3480936	3480936	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	3480936	3480936	G	-	DEL	TRPV1	ENST00000399756	human	ensembl	74_37	-1	known	frame_shift_del	c.1669	p.R557fs	1.000	tigrfam_TRP_channel	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPV1-4_channel,tigrfam_TRP_channel	-	no_errors	TRPV1	HGNC	ENSG00000196689	tier1			42	0	0.00	23	10	30.30
TRRAP	0	genome.wustl.edu	37	7	98490094	98490094	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	98490094	98490094	C	T	SNP	TRRAP	ENST00000359863	human	ensembl	74_37	+1	known	silent	c.309	p.N103	0.876	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	TRRAP	HGNC	ENSG00000196367	tier1	-	-	71	0	0.00	44	14	24.14
TRRAP	0	genome.wustl.edu	37	7	98508848	98508848	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	98508848	98508848	C	T	SNP	TRRAP	ENST00000359863	human	ensembl	74_37	+1	known	missense	c.1961	p.T654M	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	TRRAP	HGNC	ENSG00000196367	tier1	-	-	60	0	0.00	67	19	22.09
TSC1	0	genome.wustl.edu	37	9	135779172	135779172	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	135779172	135779172	G	A	SNP	TSC1	ENST00000298552	human	ensembl	74_37	-1	known	nonsense	c.2074	p.R692*	1.000	pfam_Hamartin	pfam_Hamartin,superfamily_ARM-type_fold	-	no_errors	TSC1	HGNC	ENSG00000165699	tier1	rs118203631	-	31	0	0.00	34	4	10.53
TSGA10	0	genome.wustl.edu	37	2	99725853	99725854	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	99725853	99725854	-	G	INS	TSGA10	ENST00000355053	human	ensembl	74_37	-1	known	frame_shift_ins	c.50_49	p.R17fs	0.992:0.927	NULL	NULL	-	no_errors	TSGA10	HGNC	ENSG00000135951	tier1			78	0	0.00	53	19	26.39
TSPAN32	0	genome.wustl.edu	37	11	2338585	2338585	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	2338585	2338585	G	A	SNP	TSPAN32	ENST00000182290	human	ensembl	74_37	+1	known	missense	c.731	p.R244H	0.000	NULL	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	-	no_errors	TSPAN32	HGNC	ENSG00000064201	tier1	-	-	32	0	0.00	38	5	11.63
TTBK1	0	genome.wustl.edu	37	6	43221342	43221342	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	43221342	43221342	C	T	SNP	TTBK1	ENST00000259750	human	ensembl	74_37	+1	known	nonsense	c.367	p.R123*	0.793	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTBK1	HGNC	ENSG00000146216	tier1	-	-	49	0	0.00	37	7	15.91
TTBK1	0	genome.wustl.edu	37	6	43250473	43250473	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	43250473	43250473	C	T	SNP	TTBK1	ENST00000259750	human	ensembl	74_37	+1	known	silent	c.1995	p.S665	0.988	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTBK1	HGNC	ENSG00000146216	tier1	-	-	38	0	0.00	20	11	35.48
TTBK1	0	genome.wustl.edu	37	6	43251751	43251751	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	43251751	43251751	G	A	SNP	TTBK1	ENST00000259750	human	ensembl	74_37	+1	known	silent	c.3273	p.R1091	0.994	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TTBK1	HGNC	ENSG00000146216				20	0	0.00	9	6	40.00
TTC21A	0	genome.wustl.edu	37	3	39179044	39179044	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	39179044	39179044	C	T	SNP	TTC21A	ENST00000301819	human	ensembl	74_37	+1	known	missense	c.3542	p.A1181V	1.000	NULL	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC21A	HGNC	ENSG00000168026				68	0	0.00	63	5	7.35
TTC26	0	genome.wustl.edu	37	7	138853316	138853317	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	138853316	138853317	AA	-	DEL	TTC26	ENST00000481482	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.010	-	-	-	no_errors	TTC26	HGNC	ENSG00000105948	tier1			25	0	0.00	11	4	26.67
TTC5	0	genome.wustl.edu	37	14	20763965	20763966	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	20763965	20763966	GA	-	DEL	TTC5	ENST00000258821	human	ensembl	74_37	-1	known	frame_shift_del	c.745_744	p.R249fs	1.000:1.000	smart_TPR_repeat,pfscan_TPR_repeat	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC5	HGNC	ENSG00000136319	tier1			56	0	0.00	40	19	32.20
TTC5	0	genome.wustl.edu	37	14	20770016	20770016	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	20770016	20770016	G	T	SNP	TTC5	ENST00000258821	human	ensembl	74_37	-1	known	missense	c.160	p.L54I	1.000	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC5	HGNC	ENSG00000136319	tier1	-	-	87	0	0.00	71	10	12.35
TTC7B	0	genome.wustl.edu	37	14	91007520	91007520	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	91007520	91007520	A	-	DEL	TTC7B	ENST00000554654	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TTC7B	HGNC	ENSG00000165914	tier1			32	0	0.00	26	6	18.75
TTI1	0	genome.wustl.edu	37	20	36627613	36627613	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	36627613	36627613	G	-	DEL	TTI1	ENST00000373447	human	ensembl	74_37	-1	known	frame_shift_del	c.2770	p.L924fs	1.000	superfamily_ARM-type_fold,pirsf_UCP005250	superfamily_ARM-type_fold,pirsf_UCP005250	-	no_errors	TTI1	HGNC	ENSG00000101407	tier1			52	0	0.00	45	8	15.09
TTL	0	genome.wustl.edu	37	2	113287064	113287064	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	113287064	113287064	A	-	DEL	TTL	ENST00000460450	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.083	-	-	-	no_errors	TTL	HGNC	ENSG00000114999	tier1			26	0	0.00	20	9	31.03
TTLL10	0	genome.wustl.edu	37	1	1117146	1117146	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	1117146	1117146	G	T	SNP	TTLL10	ENST00000379289	human	ensembl	74_37	+1	known	missense	c.781	p.A261S	0.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL10	HGNC	ENSG00000162571	tier1	-	-	90	0	0.00	82	12	12.63
TTLL11	0	genome.wustl.edu	37	9	124632949	124632949	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	124632949	124632949	G	A	SNP	TTLL11	ENST00000321582	human	ensembl	74_37	-1	known	silent	c.1830	p.N610	0.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL11	HGNC	ENSG00000175764	tier1	-	-	46	0	0.00	19	17	47.22
TTLL3	0	genome.wustl.edu	37	3	9868737	9868737	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	9868737	9868737	G	A	SNP	TTLL3	ENST00000426895	human	ensembl	74_37	+1	known	missense	c.1360	p.V454M	0.001	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL3	HGNC	ENSG00000214021	tier1	rs202230845	-	57	0	0.00	39	17	30.36
TTLL5	0	genome.wustl.edu	37	14	76259374	76259374	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	76259374	76259374	G	A	SNP	TTLL5	ENST00000298832	human	ensembl	74_37	+1	known	silent	c.3102	p.Q1034	1.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL5	HGNC	ENSG00000119685	tier1	-	-	61	0	0.00	34	8	19.05
TTN	0	genome.wustl.edu	37	2	179560737	179560737	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	179560737	179560737	T	-	DEL	TTN	ENST00000342992	human	ensembl	74_37	-1	known	frame_shift_del	c.27330	p.E9111fs	0.016	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1			89	0	0.00	62	20	24.39
TTN	0	genome.wustl.edu	37	2	179616234	179616234	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	179616234	179616234	T	C	SNP	TTN	ENST00000360870	human	ensembl	74_37	-1	known	missense	c.10893	p.I3631M	0.920	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Titin_Z,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	41	0	0.00	43	7	14.00
TTN	0	genome.wustl.edu	37	2	179411075	179411075	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	179411075	179411075	T	0	DEL	TTN	ENST00000342992	human	ensembl	74_37	-1	known	frame_shift_del	c.87279	p.V29094fs	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				43	0	0.00	34	8	19.05
TTN	0	genome.wustl.edu	37	2	179587594	179587594	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	179587594	179587594	G	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.18300	p.C6100W	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				68	0	0.00	72	4	5.26
TUBA8	0	genome.wustl.edu	37	22	18613631	18613631	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	18613631	18613631	C	A	SNP	TUBA8	ENST00000330423	human	ensembl	74_37	+1	known	missense	c.1078	p.P360T	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA8	HGNC	ENSG00000183785	tier1	-	-	55	0	0.00	51	12	19.05
TUBB3	0	genome.wustl.edu	37	16	90001340	90001340	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	90001340	90001340	G	A	SNP	TUBB3	ENST00000315491	human	ensembl	74_37	+1	known	missense	c.481	p.D161N	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB3	Uniprot_gn	ENSG00000258947	tier1	-	-	81	0	0.00	63	10	13.70
TUSC3	0	genome.wustl.edu	37	8	15508230	15508230	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	15508230	15508230	A	G	SNP	TUSC3	ENST00000503731	human	ensembl	74_37	+1	known	missense	c.333	p.I111M	0.992	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_OligosaccharylTrfase_OST3/OST6,pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TUSC3	HGNC	ENSG00000104723	tier1	-	-	74	0	0.00	63	5	7.35
TVP23A	0	genome.wustl.edu	37	16	10867203	10867203	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	10867203	10867203	A	-	DEL	TVP23A	ENST00000299866	human	ensembl	74_37	-1	known	frame_shift_del	c.420	p.F140fs	1.000	pfam_DUF846_euk	pfam_DUF846_euk	-	no_errors	TVP23A	HGNC	ENSG00000166676	tier1			50	0	0.00	35	22	38.60
TVP23C	0	genome.wustl.edu	37	17	15441469	15441469	+	Splice_Site	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	15441469	15441469	C	T	SNP	TVP23C	ENST00000523573	human	ensembl	74_37	-1	known	splice_site	c.162-2	e5-2	0.998	-	-	-	no_errors	TVP23C	HGNC	ENSG00000175106	tier1	-	-	150	0	0.00	120	13	9.77
TXNDC11	0	genome.wustl.edu	37	16	11773555	11773555	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	11773555	11773555	G	A	SNP	TXNDC11	ENST00000356957	human	ensembl	74_37	-1	known	silent	c.2454	p.S818	0.148	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC11	HGNC	ENSG00000153066	tier1	-	-	47	0	0.00	30	7	18.92
TXNDC11	0	genome.wustl.edu	37	16	11824630	11824630	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	11824630	11824630	A	T	SNP	TXNDC11	ENST00000356957	human	ensembl	74_37	-1	known	missense	c.570	p.S190R	1.000	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold	-	no_errors	TXNDC11	HGNC	ENSG00000153066	tier1	-	-	105	0	0.00	99	9	8.33
UBA6	0	genome.wustl.edu	37	4	68530907	68530907	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	68530907	68530907	A	-	DEL	UBA6	ENST00000322244	human	ensembl	74_37	-1	known	frame_shift_del	c.897	p.F299fs	1.000	superfamily_Molybdenum_cofac_synth_MoeB,tigrfam_UBQ-activ_enz_E1	pfam_ThiF_NAD_FAD-bd,pfam_Ub-activating_enz_e1_C,pfam_UBact_repeat,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB,prints_UBQ/SUMO-activ_enz_E1-like,tigrfam_UBQ-activ_enz_E1	-	no_errors	UBA6	HGNC	ENSG00000033178	tier1			100	0	0.00	61	13	17.57
UBE2O	0	genome.wustl.edu	37	17	74396248	74396248	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	74396248	74396248	C	-	DEL	UBE2O	ENST00000319380	human	ensembl	74_37	-1	known	frame_shift_del	c.1135	p.E379fs	1.000	NULL	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2O	HGNC	ENSG00000175931	tier1			65	0	0.00	40	20	33.33
UBE3C	0	genome.wustl.edu	37	7	156963108	156963109	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	156963108	156963109	-	T	INS	UBE3C	ENST00000348165	human	ensembl	74_37	+1	known	frame_shift_ins	c.306_307	p.Y104fs	1.000:1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_DHFR-like_dom,smart_IQ_motif_EF-hand-BS,smart_HECT,pfscan_HECT,pfscan_IQ_motif_EF-hand-BS	-	no_errors	UBE3C	HGNC	ENSG00000009335	tier1			49	0	0.00	43	12	21.82
UBE3C	0	genome.wustl.edu	37	7	156994495	156994495	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	156994495	156994495	T	C	SNP	UBE3C	ENST00000348165	human	ensembl	74_37	+1	known	missense	c.1412	p.I471T	1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_DHFR-like_dom,smart_IQ_motif_EF-hand-BS,smart_HECT,pfscan_HECT,pfscan_IQ_motif_EF-hand-BS	-	no_errors	UBE3C	HGNC	ENSG00000009335	tier1	-	-	42	0	0.00	36	9	20.00
UBN1	0	genome.wustl.edu	37	16	4924667	4924668	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	4924667	4924668	-	A	INS	UBN1	ENST00000262376	human	ensembl	74_37	+1	known	frame_shift_ins	c.2256_2257	p.P754fs	1.000:1.000	NULL	NULL	-	no_errors	UBN1	HGNC	ENSG00000118900	tier1			48	0	0.00	36	15	29.41
UBR1	0	genome.wustl.edu	37	15	43252855	43252855	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	43252855	43252855	T	-	DEL	UBR1	ENST00000290650	human	ensembl	74_37	-1	known	frame_shift_del	c.4745	p.N1582fs	0.838	NULL	pfam_ClpS_core,pfam_Znf_N-recognin,superfamily_Ribosomal_L7/12_C/ClpS-like,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR1	HGNC	ENSG00000159459	tier1			47	0	0.00	21	13	38.24
UBR5	0	genome.wustl.edu	37	8	103271268	103271268	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	103271268	103271268	G	A	SNP	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	silent	c.8046	p.C2682	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517	tier1	-	-	42	0	0.00	66	6	8.33
UBR5	0	genome.wustl.edu	37	8	103309203	103309204	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	103309203	103309204	0	A	INS	UBR5	ENST00000520539	human	ensembl	74_37	-1	known	frame_shift_ins	c.3583_3582	p.E1194fs	1.000:1.000	pfam_Znf_N-recognin,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	pfam_HECT,pfam_E3_UbLigase_EDD_UBA,pfam_PABP_HYD,pfam_Znf_N-recognin,superfamily_HECT,superfamily_PABP_HYD,superfamily_RCC1/BLIP-II,smart_Znf_N-recognin_met,smart_PABP_HYD,smart_HECT,pfscan_HECT,pfscan_Znf_N-recognin	-	no_errors	UBR5	HGNC	ENSG00000104517				67	0	0.00	72	6	7.69
UBXN7-AS1	0	genome.wustl.edu	37	3	196159010	196159011	+	RNA	INS	-	-	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	196159010	196159011	-	G	INS	UBXN7-AS1	ENST00000598881	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.004	-	-	-	no_errors	UBXN7-AS1	HGNC	ENSG00000225822	tier1			44	0	0.00	38	5	11.63
UCK2	0	genome.wustl.edu	37	1	165877195	165877195	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	165877195	165877195	T	-	DEL	UCK2	ENST00000462329	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.021	-	-	-	no_errors	UCK2	HGNC	ENSG00000143179	tier1			57	0	0.00	22	9	29.03
UGDH	0	genome.wustl.edu	37	4	39505575	39505575	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	39505575	39505575	T	-	DEL	UGDH	ENST00000316423	human	ensembl	74_37	-1	known	frame_shift_del	c.1294	p.M432fs	1.000	pfam_UDP-Glc/GDP-Man_DH_C,superfamily_UDP-Glc/GDP-Man_DH_C,tigrfam_UDP-Glc/GDP-Man	pfam_UDP-Glc/GDP-Man_DH_N,pfam_UDP-Glc/GDP-Man_DH_C,pfam_UDP-Glc/GDP-Man_DH_dimer,superfamily_UDP-Glc/GDP-Man_DH_C,superfamily_6-PGluconate_DH_C-like,tigrfam_UDP-Glc/GDP-Man	-	no_errors	UGDH	HGNC	ENSG00000109814	tier1			32	0	0.00	29	6	17.14
UGT1A3	0	genome.wustl.edu	37	2	234638283	234638283	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	234638283	234638283	T	-	DEL	UGT1A3	ENST00000482026	human	ensembl	74_37	+1	known	frame_shift_del	c.511	p.L173fs	0.996	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A3	HGNC	ENSG00000243135	tier1			94	0	0.00	73	28	27.72
UHMK1	0	genome.wustl.edu	37	1	162473599	162473599	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	162473599	162473599	C	T	SNP	UHMK1	ENST00000489294	human	ensembl	74_37	+1	known	missense	c.809	p.A270V	0.998	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RRM_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_RRM_dom,pfscan_RRM_dom,pfscan_Prot_kinase_dom	-	no_errors	UHMK1	HGNC	ENSG00000152332	tier1	-	-	101	0	0.00	84	5	5.62
UHRF1BP1	0	genome.wustl.edu	37	6	34831896	34831896	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	34831896	34831896	A	G	SNP	UHRF1BP1	ENST00000192788	human	ensembl	74_37	+1	known	silent	c.3333	p.S1111	0.030	NULL	NULL	-	no_errors	UHRF1BP1	HGNC	ENSG00000065060	tier1	-	-	53	0	0.00	50	11	18.03
UHRF2	0	genome.wustl.edu	37	9	6499821	6499822	+	RNA	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	6499821	6499822	-	C	INS	UHRF2	ENST00000492853	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	UHRF2	HGNC	ENSG00000147854	tier1			83	0	0.00	51	8	13.56
UNC5B	0	genome.wustl.edu	37	10	73051550	73051550	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	73051550	73051550	G	T	SNP	UNC5B	ENST00000335350	human	ensembl	74_37	+1	known	silent	c.1656	p.L552	1.000	pfam_ZU5,smart_ZU5,pfscan_ZU5	pfam_ZU5,pfam_Ig_I-set,pfam_Death_domain,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5B	HGNC	ENSG00000107731	tier1	-	-	63	0	0.00	40	4	8.89
UNC80	0	genome.wustl.edu	37	2	210818993	210818993	+	Silent	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	210818993	210818993	A	C	SNP	UNC80	ENST00000439458	human	ensembl	74_37	+1	known	silent	c.7258	p.R2420	1.000	NULL	NULL	-	no_errors	UNC80	HGNC	ENSG00000144406	tier1	-	-	40	0	0.00	20	13	39.39
USH2A	0	genome.wustl.edu	37	1	216373117	216373117	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	216373117	216373117	C	A	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.3663	p.Q1221H	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	53	0	0.00	31	7	18.42
USP22	0	genome.wustl.edu	37	17	20914527	20914527	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	20914527	20914527	C	T	SNP	USP22	ENST00000261497	human	ensembl	74_37	-1	known	missense	c.1040	p.G347D	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP22	HGNC	ENSG00000124422	tier1	-	-	56	0	0.00	38	13	25.00
USP24	0	genome.wustl.edu	37	1	55614173	55614173	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	55614173	55614173	C	T	SNP	USP24	ENST00000407756	human	ensembl	74_37	-1	known	missense	c.1451	p.R484H	1.000	NULL	pfam_Peptidase_C19/C67,superfamily_UBA-like,superfamily_ARM-type_fold,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Peptidase_C19/C67	-	no_errors	USP24	HGNC	ENSG00000162402	tier1	-	-	119	0	0.00	103	16	13.45
USP27X-AS1	0	genome.wustl.edu	37	X	49642955	49642957	+	RNA	DEL	CCT	CCT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	49642955	49642957	CCT	-	DEL	USP27X-AS1	ENST00000437322	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000	-	-	-	no_errors	USP27X-AS1	HGNC	ENSG00000234390	tier1			49	0	0.00	41	14	25.45
USP27X-AS1	0	genome.wustl.edu	37	X	49643277	49643278	+	RNA	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	49643277	49643278	-	C	INS	USP27X-AS1	ENST00000437322	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	USP27X-AS1	HGNC	ENSG00000234390	tier1			39	0	0.00	10	8	44.44
USP33	0	genome.wustl.edu	37	1	78207076	78207076	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	78207076	78207076	A	G	SNP	USP33	ENST00000357428	human	ensembl	74_37	-1	known	silent	c.213	p.L71	1.000	pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP	pfam_Peptidase_C19/C67,pfam_Pept_C19_DUSP,pfam_Znf_UBP,smart_Znf_UBP,smart_Pept_C19_DUSP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP33	HGNC	ENSG00000077254	tier1	rs143164238	-	88	0	0.00	56	27	32.53
USP36	0	genome.wustl.edu	37	17	76798547	76798547	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	76798547	76798547	T	-	DEL	USP36	ENST00000312010	human	ensembl	74_37	-1	known	frame_shift_del	c.2881	p.R961fs	0.566	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP36	HGNC	ENSG00000055483	tier1			106	0	0.00	59	11	15.71
USP42	0	genome.wustl.edu	37	7	6185158	6185158	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	6185158	6185158	C	T	SNP	USP42	ENST00000306177	human	ensembl	74_37	+1	known	silent	c.1002	p.Y334	0.469	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP42	HGNC	ENSG00000106346				70	0	0.00	63	4	5.97
USP7	0	genome.wustl.edu	37	16	9000392	9000393	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	9000392	9000393	-	T	INS	USP7	ENST00000344836	human	ensembl	74_37	-1	known	frame_shift_ins	c.1319_1318	p.T440fs	0.997:1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_MATH,pfam_USP7_ICP0-binding_dom,superfamily_TRAF-like,smart_MATH,pfscan_MATH,pfscan_Peptidase_C19/C67	-	no_errors	USP7	HGNC	ENSG00000187555	tier1			35	0	0.00	38	13	25.49
UTRN	0	genome.wustl.edu	37	6	144806531	144806531	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	144806531	144806531	C	A	SNP	UTRN	ENST00000367545	human	ensembl	74_37	+1	known	missense	c.3698	p.S1233Y	1.000	pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	UTRN	HGNC	ENSG00000152818	tier1	-	-	113	0	0.00	56	13	18.84
VAMP4	0	genome.wustl.edu	37	1	171678847	171678847	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	171678847	171678847	T	A	SNP	VAMP4	ENST00000236192	human	ensembl	74_37	-1	known	missense	c.303	p.R101S	1.000	pfam_Synaptobrevin,pfscan_Synaptobrevin	pfam_Synaptobrevin,pfscan_Synaptobrevin,prints_Synaptobrevin	-	no_errors	VAMP4	HGNC	ENSG00000117533	tier1	-	-	63	0	0.00	49	6	10.91
VANGL2	0	genome.wustl.edu	37	1	160394994	160394994	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	160394994	160394994	C	T	SNP	VANGL2	ENST00000368061	human	ensembl	74_37	+1	known	silent	c.1392	p.S464	1.000	pfam_Strabismus,pirsf_Strabismus	pfam_Strabismus,pirsf_Strabismus	-	no_errors	VANGL2	HGNC	ENSG00000162738	tier1	-	-	47	0	0.00	45	15	25.00
VARS	0	genome.wustl.edu	37	6	31749717	31749717	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	31749717	31749717	G	A	SNP	VARS	ENST00000375663	human	ensembl	74_37	-1	known	missense	c.2254	p.R752W	0.998	pfam_aa-tRNA-synth_Ia,tigrfam_Valyl-tRNA_ligase	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Glutathione_S-Trfase_N,pfam_Methionyl/Leucyl_tRNA_Synth,pfam_GST_C,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Glutathione-S-Trfase_C-like,superfamily_tRNA-bd_arm,prints_Valyl-tRNA_ligase,tigrfam_Valyl-tRNA_ligase	-	no_errors	VARS	HGNC	ENSG00000204394	tier1	-	-	31	0	0.00	38	4	9.52
VARS2	0	genome.wustl.edu	37	6	30893443	30893443	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	30893443	30893443	G	A	SNP	VARS2	ENST00000541562	human	ensembl	74_37	+1	known	missense	c.2998	p.G1000S	0.981	superfamily_tRNAsynth_1a_anticodon-bd	pfam_aa-tRNA-synth_Ia,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Methionyl/Leucyl_tRNA_Synth,superfamily_Val/Leu/Ile-tRNA-synth_edit,superfamily_tRNAsynth_1a_anticodon-bd,prints_Valyl-tRNA_ligase,tigrfam_Valyl-tRNA_ligase	-	no_errors	VARS2	HGNC	ENSG00000137411				35	0	0.00	29	2	6.45
VASP	0	genome.wustl.edu	37	19	46025800	46025800	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	46025800	46025800	C	T	SNP	VASP	ENST00000586014	human	ensembl	74_37	+1	known	missense	c.232	p.R78C	0.005	smart_WH1/EVH1,pfscan_WH1/EVH1	pfam_WH1/EVH1,smart_WH1/EVH1,pfscan_WH1/EVH1	-	no_errors	VASP	HGNC	ENSG00000125753	tier1	-	-	45	0	0.00	16	15	46.88
VAT1L	0	genome.wustl.edu	37	16	78011528	78011528	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	78011528	78011528	G	A	SNP	VAT1L	ENST00000302536	human	ensembl	74_37	+1	known	missense	c.1196	p.G399E	0.998	NULL	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like,smart_PKS_ER	-	no_errors	VAT1L	HGNC	ENSG00000171724	tier1	-	-	59	0	0.00	58	9	13.43
VAX1	0	genome.wustl.edu	37	10	118896029	118896029	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	118896029	118896029	C	T	SNP	VAX1	ENST00000369206	human	ensembl	74_37	-1	known	missense	c.383	p.R128H	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	VAX1	HGNC	ENSG00000148704	tier1	-	-	102	0	0.00	54	31	36.47
VCP	0	genome.wustl.edu	37	9	35062276	35062276	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	35062276	35062276	T	C	SNP	VCP	ENST00000358901	human	ensembl	74_37	-1	known	missense	c.883	p.K295E	1.000	pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_AAA_ATPase_CDC48	pfam_ATPase_AAA_core,pfam_CDC4_N-term_subdom,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Cdc48_dom2,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_Vps4_C,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase,tigrfam_AAA_ATPase_CDC48	-	no_errors	VCP	HGNC	ENSG00000165280	tier1	-	-	33	0	0.00	19	11	36.67
VCP	0	genome.wustl.edu	37	9	35067909	35067909	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	35067909	35067909	A	G	SNP	VCP	ENST00000358901	human	ensembl	74_37	-1	known	missense	c.281	p.V94A	1.000	pfam_CDC4_N-term_subdom,superfamily_Asp_de-COase-like_dom,tigrfam_AAA_ATPase_CDC48	pfam_ATPase_AAA_core,pfam_CDC4_N-term_subdom,pfam_DNA_helicase_Holl-junc_RuvB_N,pfam_Cdc48_dom2,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_Vps4_C,superfamily_P-loop_NTPase,superfamily_Asp_de-COase-like_dom,smart_AAA+_ATPase,tigrfam_AAA_ATPase_CDC48	-	no_errors	VCP	HGNC	ENSG00000165280	tier1	-	-	58	0	0.00	62	7	10.14
VDAC1	0	genome.wustl.edu	37	5	133316708	133316710	+	RNA	DEL	TTT	TTT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TTT	TTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	133316708	133316710	TTT	-	DEL	VDAC1	ENST00000492324	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000:0.000	-	-	-	no_errors	VDAC1	HGNC	ENSG00000213585	tier1			28	0	0.00	23	6	20.69
VEZF1	0	genome.wustl.edu	37	17	56052100	56052100	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	56052100	56052100	C	A	SNP	VEZF1	ENST00000581208	human	ensembl	74_37	-1	known	missense	c.1300	p.V434F	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	VEZF1	HGNC	ENSG00000136451				36	0	0.00	36	2	5.26
VEZT	0	genome.wustl.edu	37	12	95692928	95692928	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	95692928	95692928	T	-	DEL	VEZT	ENST00000356859	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.979	-	-	-	no_errors	VEZT	HGNC	ENSG00000028203	tier1			77	0	0.00	62	8	11.43
VPRBP	0	genome.wustl.edu	37	3	51452148	51452148	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	51452148	51452148	T	C	SNP	VPRBP	ENST00000335891	human	ensembl	74_37	-1	known	missense	c.2420	p.D807G	1.000	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	VPRBP	HGNC	ENSG00000145041	tier1	-	-	40	0	0.00	31	10	24.39
VPS13C	0	genome.wustl.edu	37	15	62165519	62165519	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	62165519	62165519	T	-	DEL	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	frame_shift_del	c.10504	p.R3502fs	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	tier1			62	0	0.00	69	7	9.21
VPS13C	0	genome.wustl.edu	37	15	62316019	62316019	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	62316019	62316019	T	0	DEL	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	frame_shift_del	c.474	p.K158fs	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003				40	0	0.00	49	9	15.52
VPS26B	0	genome.wustl.edu	37	11	134109963	134109963	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	134109963	134109963	C	T	SNP	VPS26B	ENST00000281187	human	ensembl	74_37	+1	known	silent	c.459	p.S153	1.000	pfam_VPS26,superfamily_Ig_E-set	pfam_VPS26,superfamily_Ig_E-set	-	no_errors	VPS26B	HGNC	ENSG00000151502	tier1	-	-	67	0	0.00	45	6	11.76
VPS36	0	genome.wustl.edu	37	13	53000038	53000038	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	53000038	53000038	A	-	DEL	VPS36	ENST00000492650	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	VPS36	HGNC	ENSG00000136100	tier1			57	0	0.00	45	21	31.82
VPS45	0	genome.wustl.edu	37	1	150049819	150049819	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	150049819	150049819	G	T	SNP	VPS45	ENST00000369130	human	ensembl	74_37	+1	known	missense	c.649	p.D217Y	1.000	pfam_Sec1-like,superfamily_Sec1-like	pfam_Sec1-like,superfamily_Sec1-like	-	no_errors	VPS45	HGNC	ENSG00000136631	tier1	-	-	45	0	0.00	34	12	26.09
VPS4A	0	genome.wustl.edu	37	16	69353432	69353432	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	69353432	69353432	G	-	DEL	VPS4A	ENST00000254950	human	ensembl	74_37	+1	known	frame_shift_del	c.606	p.E204fs	1.000	pfam_ATPase_AAA_core,pfam_IstB_ATP-bd,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_MIT,pfam_IstB_ATP-bd,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_MIT,smart_AAA+_ATPase	-	no_errors	VPS4A	HGNC	ENSG00000132612	tier1			32	0	0.00	31	4	11.43
VPS4A	0	genome.wustl.edu	37	16	69355062	69355062	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	69355062	69355062	C	T	SNP	VPS4A	ENST00000254950	human	ensembl	74_37	+1	known	silent	c.960	p.H320	0.006	superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_MIT,pfam_IstB_ATP-bd,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_MIT,smart_AAA+_ATPase	-	no_errors	VPS4A	HGNC	ENSG00000132612	tier1	-	-	66	0	0.00	43	14	24.56
VPS72	0	genome.wustl.edu	37	1	151149461	151149461	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	151149461	151149461	T	A	SNP	VPS72	ENST00000368892	human	ensembl	74_37	-1	known	missense	c.754	p.T252S	0.116	NULL	pfam_YL1,pfam_YL1_C	-	no_errors	VPS72	HGNC	ENSG00000163159	tier1	-	-	47	0	0.00	31	7	17.50
VPS8	0	genome.wustl.edu	37	3	184675241	184675241	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	184675241	184675241	T	C	SNP	VPS8	ENST00000287546	human	ensembl	74_37	+1	known	missense	c.3115	p.F1039L	1.000	superfamily_Quinonprotein_ADH-like_supfam	superfamily_Quinonprotein_ADH-like_supfam,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Znf_RING,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	VPS8	HGNC	ENSG00000156931	tier1	-	-	52	0	0.00	43	6	12.24
VWA2	0	genome.wustl.edu	37	10	116013454	116013454	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	116013454	116013454	A	G	SNP	VWA2	ENST00000392982	human	ensembl	74_37	+1	known	missense	c.97	p.T33A	1.000	NULL	pfam_VWF_A,pfam_EG-like_dom,pfam_EGF_extracell,smart_VWF_A,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_VWF_A	-	no_errors	VWA2	HGNC	ENSG00000165816	tier1	-	-	70	0	0.00	43	11	20.37
VWA5A	0	genome.wustl.edu	37	11	123994433	123994433	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	123994433	123994433	C	T	SNP	VWA5A	ENST00000392748	human	ensembl	74_37	+1	known	silent	c.1086	p.A362	0.052	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VIT,pfam_VWF_A,smart_VIT,smart_VWF_A,pfscan_VWF_A	-	no_errors	VWA5A	HGNC	ENSG00000110002	tier1	-	-	58	0	0.00	52	11	17.46
VWA7	0	genome.wustl.edu	37	6	31743902	31743902	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	31743902	31743902	G	A	SNP	VWA7	ENST00000375686	human	ensembl	74_37	-1	known	missense	c.352	p.P118S	0.611	NULL	NULL	-	no_errors	VWA7	HGNC	ENSG00000204396	tier1	-	-	46	0	0.00	44	11	20.00
WARS2	0	genome.wustl.edu	37	1	119575742	119575742	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	119575742	119575742	C	A	SNP	WARS2	ENST00000235521	human	ensembl	74_37	-1	known	missense	c.875	p.R292L	0.379	pfam_aa-tRNA-synth_Ic,tigrfam_Trp-tRNA-ligase	pfam_aa-tRNA-synth_Ic,prints_Trp-tRNA-ligase,tigrfam_Trp-tRNA-ligase	-	no_errors	WARS2	HGNC	ENSG00000116874				40	0	0.00	37	3	7.50
WASF1	0	genome.wustl.edu	37	6	110426610	110426610	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	110426610	110426610	C	T	SNP	WASF1	ENST00000359451	human	ensembl	74_37	-1	known	missense	c.713	p.R238K	1.000	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF1	HGNC	ENSG00000112290				23	0	0.00	28	7	20.00
WASIR1	0	genome.wustl.edu	37	X	155246390	155246390	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	155246390	155246390	C	T	SNP	WASIR1	ENST00000399966	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	WASIR1	HGNC	ENSG00000185203	tier1	-	-	39	0	0.00	15	13	46.43
WASL	0	genome.wustl.edu	37	7	123332485	123332485	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	123332485	123332485	T	-	DEL	WASL	ENST00000223023	human	ensembl	74_37	-1	known	frame_shift_del	c.1263	p.V422fs	1.000	pfam_WH2_dom,superfamily_WASP_C,smart_WH2_dom,pfscan_WH2_dom	pfam_WH1/EVH1,pfam_CRIB_dom,pfam_WH2_dom,superfamily_WASP_C,smart_WH1/EVH1,smart_CRIB_dom,smart_WH2_dom,pfscan_CRIB_dom,pfscan_WH1/EVH1,pfscan_WH2_dom	-	no_errors	WASL	HGNC	ENSG00000106299	tier1			63	0	0.00	56	10	15.15
WBSCR17	0	genome.wustl.edu	37	7	71135007	71135007	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	71135007	71135007	A	G	SNP	WBSCR17	ENST00000333538	human	ensembl	74_37	+1	known	silent	c.1317	p.K439	1.000	NULL	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	WBSCR17	HGNC	ENSG00000185274	tier1	-	-	64	0	0.00	42	4	8.70
WDFY2	0	genome.wustl.edu	37	13	52158844	52158845	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	52158844	52158845	-	A	INS	WDFY2	ENST00000298125	human	ensembl	74_37	+1	known	frame_shift_ins	c.21_22	p.P8fs	1.000:1.000	NULL	pfam_WD40_repeat,pfam_Znf_FYVE,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,smart_WD40_repeat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDFY2	HGNC	ENSG00000139668	tier1			67	0	0.00	51	15	22.73
WDFY3	0	genome.wustl.edu	37	4	85781626	85781626	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	85781626	85781626	C	T	SNP	WDFY3	ENST00000295888	human	ensembl	74_37	-1	known	missense	c.119	p.R40Q	1.000	NULL	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl_sf,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625				38	0	0.00	38	2	5.00
WDFY4	0	genome.wustl.edu	37	10	50185013	50185013	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	50185013	50185013	G	A	SNP	WDFY4	ENST00000325239	human	ensembl	74_37	+1	known	missense	c.9280	p.G3094S	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY4	HGNC	ENSG00000128815				18	0	0.00	16	12	42.86
WDPCP	0	genome.wustl.edu	37	2	63631702	63631702	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	63631702	63631702	C	T	SNP	WDPCP	ENST00000272321	human	ensembl	74_37	-1	known	missense	c.916	p.V306I	0.612	pfam_DUF3312	pfam_DUF3312,superfamily_WD40_repeat_dom	-	no_errors	WDPCP	HGNC	ENSG00000143951	tier1	-	-	48	0	0.00	31	6	16.22
WDR35	0	genome.wustl.edu	37	2	20137695	20137695	+	Silent	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	20137695	20137695	A	C	SNP	WDR35	ENST00000345530	human	ensembl	74_37	-1	known	silent	c.2109	p.A703	0.983	pirsf_WD_repeat_p35	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pirsf_WD_repeat_p35,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR35	HGNC	ENSG00000118965				35	0	0.00	39	4	9.30
WDR4	0	genome.wustl.edu	37	21	44275838	44275838	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	44275838	44275838	C	T	SNP	WDR4	ENST00000330317	human	ensembl	74_37	-1	known	missense	c.680	p.C227Y	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR4	HGNC	ENSG00000160193	tier1	-	-	108	0	0.00	70	10	12.50
WDR87	0	genome.wustl.edu	37	19	38379432	38379433	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	38379432	38379433	-	T	INS	WDR87	ENST00000447313	human	ensembl	74_37	-1	known	frame_shift_ins	c.4879_4878	p.R1626fs	0.000:0.000	superfamily_ARM-type_fold	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,superfamily_Quinolinate_PRibosylTrfase_C,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR87	HGNC	ENSG00000171804	tier1			120	0	0.00	111	17	13.28
WDR88	0	genome.wustl.edu	37	19	33623177	33623177	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	33623177	33623177	C	A	SNP	WDR88	ENST00000355868	human	ensembl	74_37	+1	known	silent	c.102	p.S34	0.001	NULL	pfam_WD40_repeat,pfam_PQQ_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,smart_PQQ_beta_propeller_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	WDR88	HGNC	ENSG00000166359	tier1	-	-	138	0	0.00	102	14	12.07
WHAMMP3	0	genome.wustl.edu	37	15	23198619	23198619	+	RNA	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	15	23198619	23198619	T	C	SNP	WHAMMP3	ENST00000400153	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	WHAMMP3	HGNC	ENSG00000187667	tier1	-	-	177	0	0.00	132	20	13.07
WHSC1L1	0	genome.wustl.edu	37	8	38175370	38175370	+	RNA	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	38175370	38175370	A	G	SNP	WHSC1L1	ENST00000525081	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	WHSC1L1	HGNC	ENSG00000147548	tier1	-	-	30	0	0.00	28	9	24.32
WIPI1	0	genome.wustl.edu	37	17	66417879	66417879	+	RNA	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	66417879	66417879	G	-	DEL	WIPI1	ENST00000589459	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	WIPI1	HGNC	ENSG00000070540	tier1			38	0	0.00	19	4	17.39
WIPI1	0	genome.wustl.edu	37	17	66425048	66425048	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	66425048	66425048	G	A	SNP	WIPI1	ENST00000262139	human	ensembl	74_37	-1	known	missense	c.995	p.A332V	0.050	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WIPI1	HGNC	ENSG00000070540	tier1	-	-	25	0	0.00	10	18	64.29
WISP1	0	genome.wustl.edu	37	8	134232957	134232957	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	134232957	134232957	C	-	DEL	WISP1	ENST00000250160	human	ensembl	74_37	+1	known	frame_shift_del	c.483	p.P163fs	0.918	pfam_VWF_C,smart_VWF_C,pirsf_IGFBP_CNN,pfscan_VWF_C	pfam_IGFBP-like,pfam_VWF_C,pfam_Cys_knot,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_IGFBP-like,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_Cys_knot_C,pirsf_IGFBP_CNN,pfscan_Cys_knot_C,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	WISP1	HGNC	ENSG00000104415	tier1			57	0	0.00	51	7	12.07
WNK2	0	genome.wustl.edu	37	9	96070769	96070769	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	96070769	96070769	C	T	SNP	WNK2	ENST00000297954	human	ensembl	74_37	+1	known	missense	c.6530	p.A2177V	0.001	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK2	HGNC	ENSG00000165238	tier1	-	-	69	0	0.00	63	7	10.00
WNK2	0	genome.wustl.edu	37	9	96079878	96079878	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	96079878	96079878	C	T	SNP	WNK2	ENST00000297954	human	ensembl	74_37	+1	known	missense	c.6704	p.P2235L	0.995	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK2	HGNC	ENSG00000165238	tier1	-	-	73	0	0.00	51	6	10.53
WNT1	0	genome.wustl.edu	37	12	49374348	49374348	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	49374348	49374348	G	-	DEL	WNT1	ENST00000293549	human	ensembl	74_37	+1	known	frame_shift_del	c.500	p.G169fs	1.000	pfam_Wnt,smart_Wnt,prints_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt1	-	no_errors	WNT1	HGNC	ENSG00000125084	tier1			50	0	0.00	39	7	15.22
WNT9A	0	genome.wustl.edu	37	1	228109316	228109316	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	228109316	228109316	A	G	SNP	WNT9A	ENST00000272164	human	ensembl	74_37	-1	known	missense	c.1001	p.V334A	1.000	pfam_Wnt,smart_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt9a	-	no_errors	WNT9A	HGNC	ENSG00000143816	tier1	-	-	93	0	0.00	40	13	24.53
WRB	0	genome.wustl.edu	37	21	40762674	40762674	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	40762674	40762674	G	A	SNP	WRB	ENST00000333781	human	ensembl	74_37	+1	known	silent	c.153	p.A51	0.001	NULL	NULL	-	no_errors	WRB	HGNC	ENSG00000182093	tier1	rs142448585	-	61	0	0.00	32	15	31.91
WRN	0	genome.wustl.edu	37	8	30946428	30946428	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	30946428	30946428	T	C	SNP	WRN	ENST00000298139	human	ensembl	74_37	+1	known	silent	c.1599	p.N533	0.002	NULL	pfam_3'-5'_exonuclease_dom,pfam_Helicase_C,pfam_RQC_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	WRN	HGNC	ENSG00000165392	tier1	-	-	50	0	0.00	67	21	23.86
WRN	0	genome.wustl.edu	37	8	30977866	30977866	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	30977866	30977866	T	C	SNP	WRN	ENST00000298139	human	ensembl	74_37	+1	known	silent	c.2556	p.I852	0.998	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	pfam_3'-5'_exonuclease_dom,pfam_Helicase_C,pfam_RQC_domain,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_HRDC_dom,superfamily_P-loop_NTPase,superfamily_RNaseH-like_dom,superfamily_HRDC-like,smart_3'-5'_exonuclease_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_RQC_domain,smart_HRDC_dom,pfscan_HRDC_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,tigrfam_DNA_helicase_ATP-dep_RecQ	-	no_errors	WRN	HGNC	ENSG00000165392	tier1	-	-	71	0	0.00	67	8	10.67
WTAP	0	genome.wustl.edu	37	6	160163106	160163106	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	160163106	160163106	T	-	DEL	WTAP	ENST00000462110	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	WTAP	HGNC	ENSG00000146457	tier1			69	0	0.00	38	18	32.14
WWC2	0	genome.wustl.edu	37	4	184203860	184203860	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	184203860	184203860	G	T	SNP	WWC2	ENST00000448232	human	ensembl	74_37	+1	known	splice_site	c.2757-1	e18-1	0.953	-	-	-	no_errors	WWC2	HGNC	ENSG00000151718	tier1	-	-	55	0	0.00	36	4	10.00
WWP1	0	genome.wustl.edu	37	8	87443634	87443635	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	87443634	87443635	-	A	INS	WWP1	ENST00000265428	human	ensembl	74_37	+1	known	frame_shift_ins	c.1389_1388	p.R465fs	1.000:1.000	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	WWP1	HGNC	ENSG00000123124	tier1			50	0	0.00	38	17	30.91
WWP2	0	genome.wustl.edu	37	16	69921970	69921971	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	69921970	69921971	-	C	INS	WWP2	ENST00000356003	human	ensembl	74_37	+1	known	frame_shift_ins	c.732_733	p.E245fs	0.900:0.891	NULL	pfam_HECT,pfam_WW_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_WW_dom	-	no_errors	WWP2	HGNC	ENSG00000198373	tier1			83	0	0.00	61	18	22.78
XG	0	genome.wustl.edu	37	X	2670327	2670327	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	2670327	2670327	G	C	SNP	XG	ENST00000419513	human	ensembl	74_37	+1	known	missense	c.12	p.W4C	0.000	NULL	pfam_CD99L2	-	no_errors	XG	HGNC	ENSG00000124343	tier1	-	-	247	0	0.00	87	74	45.68
XIST	0	genome.wustl.edu	37	X	73072350	73072350	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	73072350	73072350	A	-	DEL	XIST	ENST00000429829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XIST	HGNC	ENSG00000229807	tier1			146	0	0.00	74	34	31.48
XKR4	0	genome.wustl.edu	37	8	56435983	56435983	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	56435983	56435983	G	A	SNP	XKR4	ENST00000327381	human	ensembl	74_37	+1	known	missense	c.1150	p.A384T	1.000	pfam_Transport_prot_XK	pfam_Transport_prot_XK	-	no_errors	XKR4	HGNC	ENSG00000206579	tier1	-	-	70	0	0.00	68	36	34.62
XPA	0	genome.wustl.edu	37	9	100437634	100437634	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	100437634	100437634	T	-	DEL	XPA	ENST00000485042	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	XPA	HGNC	ENSG00000136936	tier1			15	0	0.00	15	6	28.57
XPA	0	genome.wustl.edu	37	9	100444701	100444701	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	100444701	100444701	C	T	SNP	XPA	ENST00000462523	human	ensembl	74_37	-1	known	missense	c.685	p.A229T	0.001	NULL	pfam_XPA_C,pfam_Znf_XPA_CS,superfamily_DNA-bd_dom_put,tigrfam_XPA	-	no_errors	XPA	HGNC	ENSG00000136936	tier1	-	-	52	0	0.00	41	7	14.58
XPO5	0	genome.wustl.edu	37	6	43538375	43538375	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	43538375	43538375	T	G	SNP	XPO5	ENST00000265351	human	ensembl	74_37	-1	known	missense	c.485	p.E162A	1.000	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPO5	HGNC	ENSG00000124571	tier1	-	-	54	0	0.00	45	14	23.73
XPOT	0	genome.wustl.edu	37	12	64812755	64812755	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	64812755	64812755	T	-	DEL	XPOT	ENST00000332707	human	ensembl	74_37	+1	known	frame_shift_del	c.370	p.F126fs	1.000	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPOT	HGNC	ENSG00000184575	tier1			105	0	0.00	85	26	23.42
XRCC5	0	genome.wustl.edu	37	2	216990641	216990642	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	216990641	216990642	GA	-	DEL	XRCC5	ENST00000392132	human	ensembl	74_37	+1	known	frame_shift_del	c.685_686	p.L231fs	1.000:1.000	pfam_Ku_N,smart_VWF_A	pfam_Ku_N,pfam_Ku_PK_bind,pfam_Ku70/Ku80_beta-barrel_dom,pfam_Ku_C,superfamily_SPOC_like_C_dom,superfamily_Ku_PK_bind,smart_VWF_A,smart_Ku70/Ku80_beta-barrel_dom	-	no_errors	XRCC5	HGNC	ENSG00000079246	tier1			55	0	0.00	50	21	29.58
XXYLT1	0	genome.wustl.edu	37	3	194877218	194877218	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	194877218	194877218	C	T	SNP	XXYLT1	ENST00000310380	human	ensembl	74_37	-1	known	missense	c.745	p.A249T	0.905	pfam_Glyco_trans_8	pfam_Glyco_trans_8	-	no_errors	XXYLT1	HGNC	ENSG00000173950	tier1	-	-	47	0	0.00	44	6	12.00
XYLT2	0	genome.wustl.edu	37	17	48432899	48432899	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	48432899	48432899	C	T	SNP	XYLT2	ENST00000017003	human	ensembl	74_37	+1	known	missense	c.1045	p.R349W	1.000	pfam_Glyco_trans_14	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT2	HGNC	ENSG00000015532	tier1	-	-	23	0	0.00	7	18	72.00
YBX1	0	genome.wustl.edu	37	1	43166567	43166567	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	43166567	43166567	A	G	SNP	YBX1	ENST00000321358	human	ensembl	74_37	+1	known	missense	c.856	p.N286D	1.000	NULL	pfam_CSP_DNA-bd,superfamily_NA-bd_OB-fold,smart_Cold_shock_prot,prints_CSP_DNA-bd	-	no_errors	YBX1	HGNC	ENSG00000065978	tier1	-	-	141	0	0.00	106	15	12.40
YEATS2	0	genome.wustl.edu	37	3	183454555	183454555	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	183454555	183454555	A	G	SNP	YEATS2	ENST00000305135	human	ensembl	74_37	+1	known	missense	c.862	p.R288G	1.000	pfam_YEATS,pfscan_YEATS	pfam_YEATS,pfscan_YEATS	-	no_errors	YEATS2	HGNC	ENSG00000163872	tier1	-	-	73	0	0.00	49	6	10.91
YES1	0	genome.wustl.edu	37	18	743079	743079	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	743079	743079	G	A	SNP	YES1	ENST00000314574	human	ensembl	74_37	-1	known	missense	c.899	p.T300M	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	YES1	HGNC	ENSG00000176105	tier1	-	-	67	0	0.00	49	10	16.95
YIF1A	0	genome.wustl.edu	37	11	66052316	66052316	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	11	66052316	66052316	G	-	DEL	YIF1A	ENST00000471387	human	ensembl	74_37	-1	putative	frame_shift_del	c.334	p.L112fs	0.000	NULL	pfam_Hrf1	-	no_errors	YIF1A	HGNC	ENSG00000174851	tier1			62	0	0.00	43	7	14.00
YLPM1	0	genome.wustl.edu	37	14	75277022	75277023	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	75277022	75277023	-	A	INS	YLPM1	ENST00000325680	human	ensembl	74_37	+1	known	frame_shift_ins	c.5127_5128	p.R1710fs	1.000:1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	YLPM1	HGNC	ENSG00000119596	tier1			51	0	0.00	20	4	16.67
YTHDC2	0	genome.wustl.edu	37	5	112889315	112889315	+	Nonsense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	112889315	112889315	T	G	SNP	YTHDC2	ENST00000161863	human	ensembl	74_37	+1	known	nonsense	c.1896	p.Y632*	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_YTH_domain,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DUF1605,pfam_R3H_ss-bd,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_R3H_ss-bd,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_R3H_ss-bd,pfscan_YTH_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	YTHDC2	HGNC	ENSG00000047188	tier1	-	-	49	0	0.00	53	5	8.62
YY1	0	genome.wustl.edu	37	14	100706003	100706003	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	100706003	100706003	G	A	SNP	YY1	ENST00000262238	human	ensembl	74_37	+1	known	missense	c.422	p.G141D	0.984	pirsf_TF_Yin_yang	pfam_Znf_C2H2,smart_Znf_C2H2-like,pirsf_TF_Yin_yang,pfscan_Znf_C2H2	-	no_errors	YY1	HGNC	ENSG00000100811	tier1	-	-	12	0	0.00	18	5	21.74
YY1	0	genome.wustl.edu	37	14	100706005	100706005	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	100706005	100706005	G	A	SNP	YY1	ENST00000262238	human	ensembl	74_37	+1	known	missense	c.424	p.D142N	1.000	pirsf_TF_Yin_yang	pfam_Znf_C2H2,smart_Znf_C2H2-like,pirsf_TF_Yin_yang,pfscan_Znf_C2H2	-	no_errors	YY1	HGNC	ENSG00000100811	tier1	-	-	11	0	0.00	16	6	27.27
ZACN	0	genome.wustl.edu	37	17	74077707	74077707	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	17	74077707	74077707	G	-	DEL	ZACN	ENST00000334586	human	ensembl	74_37	+1	known	frame_shift_del	c.751	p.L253fs	0.950	superfamily_Neurotrans-gated_channel_TM	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM	-	no_errors	ZACN	HGNC	ENSG00000186919	tier1			49	0	0.00	27	10	27.03
ZBTB11	0	genome.wustl.edu	37	3	101371366	101371366	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	101371366	101371366	T	A	SNP	ZBTB11	ENST00000312938	human	ensembl	74_37	-1	known	missense	c.2618	p.Y873F	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB11	HGNC	ENSG00000066422	tier1	-	-	66	0	0.00	50	14	21.88
ZBTB12	0	genome.wustl.edu	37	6	31868164	31868164	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	31868164	31868164	C	-	DEL	ZBTB12	ENST00000375527	human	ensembl	74_37	-1	known	frame_shift_del	c.919	p.A307fs	0.002	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB12	HGNC	ENSG00000204366	tier1			37	0	0.00	31	9	22.50
ZBTB20	0	genome.wustl.edu	37	3	114069876	114069876	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	114069876	114069876	C	T	SNP	ZBTB20	ENST00000474710	human	ensembl	74_37	-1	known	missense	c.1049	p.R350H	1.000	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB20	HGNC	ENSG00000181722	tier1	-	-	52	0	0.00	32	23	41.82
ZBTB21	0	genome.wustl.edu	37	21	43412316	43412317	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	21	43412316	43412317	TC	-	DEL	ZBTB21	ENST00000310826	human	ensembl	74_37	-1	known	frame_shift_del	c.1889_1888	p.E630fs	1.000:1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB21	HGNC	ENSG00000173276	tier1			46	0	0.00	34	11	24.44
ZBTB48	0	genome.wustl.edu	37	1	6649032	6649032	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	6649032	6649032	G	A	SNP	ZBTB48	ENST00000377674	human	ensembl	74_37	+1	known	silent	c.1827	p.R609	0.996	NULL	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB48	HGNC	ENSG00000204859	tier1	-	-	60	0	0.00	48	6	11.11
ZBTB5	0	genome.wustl.edu	37	9	37441755	37441755	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	37441755	37441755	C	A	SNP	ZBTB5	ENST00000307750	human	ensembl	74_37	-1	known	missense	c.794	p.G265V	0.020	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB5	HGNC	ENSG00000168795				35	0	0.00	32	3	8.57
ZBTB8A	0	genome.wustl.edu	37	1	33060715	33060715	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	33060715	33060715	C	T	SNP	ZBTB8A	ENST00000373510	human	ensembl	74_37	+1	known	missense	c.884	p.A295V	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,pfam_Znf_C2H2,pfam_DUF3342,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB8A	HGNC	ENSG00000160062	tier1	-	-	56	0	0.00	42	8	16.00
ZC3H13	0	genome.wustl.edu	37	13	46542966	46542967	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	46542966	46542967	-	T	INS	ZC3H13	ENST00000242848	human	ensembl	74_37	-1	known	frame_shift_ins	c.3713_3712	p.T1238fs	0.994:1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H13	HGNC	ENSG00000123200	tier1			63	0	0.00	43	13	23.21
ZC3H18	0	genome.wustl.edu	37	16	88691141	88691141	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	88691141	88691141	C	-	DEL	ZC3H18	ENST00000301011	human	ensembl	74_37	+1	known	frame_shift_del	c.2030	p.R680fs	0.568	NULL	smart_Znf_CCCH	-	no_errors	ZC3H18	HGNC	ENSG00000158545	tier1			50	0	0.00	44	14	24.14
ZC3H3	0	genome.wustl.edu	37	8	144621273	144621273	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	144621273	144621273	G	A	SNP	ZC3H3	ENST00000262577	human	ensembl	74_37	-1	known	silent	c.264	p.A88	0.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H3	HGNC	ENSG00000014164	tier1	-	-	92	0	0.00	89	9	9.18
ZCCHC11	0	genome.wustl.edu	37	1	52937633	52937633	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	52937633	52937633	T	-	DEL	ZCCHC11	ENST00000257177	human	ensembl	74_37	-1	known	frame_shift_del	c.2869	p.R957fs	1.000	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,pfam_Nucleotidyltransferase,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC11	HGNC	ENSG00000134744	tier1			77	0	0.00	65	11	14.47
ZCCHC11	0	genome.wustl.edu	37	1	52940535	52940535	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	52940535	52940535	A	G	SNP	ZCCHC11	ENST00000257177	human	ensembl	74_37	-1	known	missense	c.2696	p.V899A	1.000	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,pfam_Nucleotidyltransferase,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC11	HGNC	ENSG00000134744	tier1	-	-	44	0	0.00	16	16	50.00
ZCCHC4	0	genome.wustl.edu	37	4	25335610	25335610	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	4	25335610	25335610	G	T	SNP	ZCCHC4	ENST00000302874	human	ensembl	74_37	+1	known	missense	c.686	p.R229L	1.000	pfam_N6_adenine_Mtase-rel_euk	pfam_Znf_GRF,pfam_N6_adenine_Mtase-rel_euk,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZCCHC4	HGNC	ENSG00000168228	tier1	-	-	74	0	0.00	47	16	25.00
ZCCHC6	0	genome.wustl.edu	37	9	88932151	88932151	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	88932151	88932151	A	G	SNP	ZCCHC6	ENST00000375963	human	ensembl	74_37	-1	known	missense	c.3257	p.V1086A	1.000	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_U1,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC6	HGNC	ENSG00000083223	tier1	-	-	86	0	0.00	61	11	15.28
ZCCHC6	0	genome.wustl.edu	37	9	88937823	88937823	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	9	88937823	88937823	A	-	DEL	ZCCHC6	ENST00000375963	human	ensembl	74_37	-1	known	frame_shift_del	c.2842	p.Y948fs	1.000	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_U1,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC6	HGNC	ENSG00000083223	tier1			35	0	0.00	17	7	29.17
ZCRB1	0	genome.wustl.edu	37	12	42707711	42707711	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	42707711	42707711	C	T	SNP	ZCRB1	ENST00000266529	human	ensembl	74_37	-1	known	silent	c.411	p.K137	1.000	NULL	pfam_RRM_dom,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_RRM_dom_euk,smart_RRM_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_RRM_dom	-	no_errors	ZCRB1	HGNC	ENSG00000139168				86	0	0.00	51	3	5.56
ZCWPW1	0	genome.wustl.edu	37	7	100016812	100016812	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	100016812	100016812	C	A	SNP	ZCWPW1	ENST00000398027	human	ensembl	74_37	-1	known	nonsense	c.283	p.E95*	0.995	NULL	pfam_Znf_CW,pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_CW	-	no_errors	ZCWPW1	HGNC	ENSG00000078487	tier1	-	-	45	0	0.00	44	12	21.43
ZDBF2	0	genome.wustl.edu	37	2	207174428	207174428	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	207174428	207174428	A	-	DEL	ZDBF2	ENST00000374423	human	ensembl	74_37	+1	known	frame_shift_del	c.5176	p.K1728fs	0.000	NULL	pfam_Znf_DBF,smart_Znf_DBF	-	no_errors	ZDBF2	HGNC	ENSG00000204186	tier1			25	0	0.00	32	5	13.51
ZDHHC11B	0	genome.wustl.edu	37	5	756154	756154	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	5	756154	756154	T	C	SNP	ZDHHC11B	ENST00000382776	human	ensembl	74_37	-1	known	missense	c.328	p.M110V	0.012	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC11B	HGNC	ENSG00000206077	tier1	-	-	46	0	0.00	11	6	35.29
ZDHHC8	0	genome.wustl.edu	37	22	20132832	20132833	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	20132832	20132833	-	C	INS	ZDHHC8	ENST00000334554	human	ensembl	74_37	+1	known	frame_shift_ins	c.2207_2208	p.G739fs	1.000:1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,superfamily_Plexin-like_fold,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC8	HGNC	ENSG00000099904	tier1			33	0	0.00	28	11	28.21
ZFAND4	0	genome.wustl.edu	37	10	46121407	46121409	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	46121407	46121409	CTC	-	DEL	ZFAND4	ENST00000344646	human	ensembl	74_37	-1	known	in_frame_del	c.1864_1862	p.G621in_frame_del	0.020:0.001:0.690	NULL	pfam_Ubiquitin_dom,pfam_Znf_AN1,smart_Ubiquitin_dom,smart_Znf_AN1,pfscan_Znf_AN1,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	ZFAND4	HGNC	ENSG00000172671	tier1			47	0	0.00	35	9	20.45
ZFAND4	0	genome.wustl.edu	37	10	46143826	46143826	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	46143826	46143826	C	T	SNP	ZFAND4	ENST00000344646	human	ensembl	74_37	-1	known	missense	c.485	p.G162D	1.000	NULL	pfam_Ubiquitin_dom,pfam_Znf_AN1,smart_Ubiquitin_dom,smart_Znf_AN1,pfscan_Znf_AN1,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	ZFAND4	HGNC	ENSG00000172671	tier1	-	-	53	0	0.00	37	11	22.92
ZFHX2	0	genome.wustl.edu	37	14	24004094	24004094	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	24004094	24004094	C	T	SNP	ZFHX2	ENST00000419474	human	ensembl	74_37	-1	known	silent	c.441	p.A147	0.063	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX2	HGNC	ENSG00000136367	tier1	-	-	39	0	0.00	25	4	13.79
ZFP36L1	0	genome.wustl.edu	37	14	69262957	69262957	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	69262957	69262957	G	-	DEL	ZFP36L1	ENST00000408913	human	ensembl	74_37	-1	known	frame_shift_del	c.55	p.A20fs	0.000	NULL	NULL	-	no_errors	ZFP36L1	HGNC	ENSG00000185650	tier1			35	0	0.00	28	10	26.32
ZFYVE1	0	genome.wustl.edu	37	14	73442396	73442396	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	73442396	73442396	C	T	SNP	ZFYVE1	ENST00000553891	human	ensembl	74_37	-1	known	missense	c.1669	p.A557T	1.000	superfamily_Znf_FYVE_PHD,superfamily_Growth_fac_rcpt_N_dom	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,superfamily_P-loop_NTPase,superfamily_Growth_fac_rcpt_N_dom,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE1	HGNC	ENSG00000165861	tier1	-	-	35	0	0.00	34	4	10.53
ZFYVE26	0	genome.wustl.edu	37	14	68229514	68229514	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	14	68229514	68229514	G	A	SNP	ZFYVE26	ENST00000347230	human	ensembl	74_37	-1	known	silent	c.6034	p.L2012	1.000	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE26	HGNC	ENSG00000072121				30	0	0.00	21	2	8.70
ZHX1	0	genome.wustl.edu	37	8	124266180	124266180	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	124266180	124266180	A	G	SNP	ZHX1	ENST00000297857	human	ensembl	74_37	-1	known	silent	c.2007	p.P669	0.001	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZHX1	HGNC	ENSG00000165156	tier1	-	-	44	0	0.00	56	4	6.67
ZHX2	0	genome.wustl.edu	37	8	123963925	123963925	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	123963925	123963925	G	A	SNP	ZHX2	ENST00000314393	human	ensembl	74_37	+1	known	missense	c.175	p.E59K	0.903	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZHX2	HGNC	ENSG00000178764	tier1	-	-	36	0	0.00	34	12	26.09
ZKSCAN5	0	genome.wustl.edu	37	7	99103706	99103706	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	99103706	99103706	C	-	DEL	ZKSCAN5	ENST00000326775	human	ensembl	74_37	+1	known	frame_shift_del	c.39	p.P15fs	0.980	NULL	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN5	HGNC	ENSG00000196652	tier1			50	0	0.00	36	8	18.18
ZMAT1	0	genome.wustl.edu	37	X	101138439	101138440	+	RNA	DEL	TT	TT	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	101138439	101138440	TT	-	DEL	ZMAT1	ENST00000494068	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ZMAT1	HGNC	ENSG00000166432	tier1			33	0	0.00	19	5	20.83
ZMIZ1	0	genome.wustl.edu	37	10	80968093	80968093	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	80968093	80968093	C	T	SNP	ZMIZ1	ENST00000334512	human	ensembl	74_37	+1	known	missense	c.61	p.H21Y	1.000	NULL	pfam_Znf_MIZ,pfscan_Znf_MIZ	-	no_errors	ZMIZ1	HGNC	ENSG00000108175	tier1	-	-	32	0	0.00	25	4	13.79
ZMPSTE24	0	genome.wustl.edu	37	1	40756543	40756543	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	40756543	40756543	T	-	DEL	ZMPSTE24	ENST00000372759	human	ensembl	74_37	+1	known	frame_shift_del	c.1077	p.L362fs	1.000	pfam_Peptidase_M48	pfam_Peptidase_M48	-	no_errors	ZMPSTE24	HGNC	ENSG00000084073	tier1			60	0	0.00	46	11	19.30
ZMYM2	0	genome.wustl.edu	37	13	20657094	20657094	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	13	20657094	20657094	A	-	DEL	ZMYM2	ENST00000382869	human	ensembl	74_37	+1	known	frame_shift_del	c.3742	p.N1250fs	1.000	pfam_DUF3504	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM2	HGNC	ENSG00000121741	tier1			46	0	0.00	34	16	32.00
ZMYM3	0	genome.wustl.edu	37	X	70470303	70470303	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	X	70470303	70470303	T	-	DEL	ZMYM3	ENST00000373988	human	ensembl	74_37	-1	known	frame_shift_del	c.1058	p.K353fs	1.000	pfam_Znf_MYM	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM3	HGNC	ENSG00000147130	tier1			94	0	0.00	32	25	43.86
ZNF12	0	genome.wustl.edu	37	7	6731613	6731614	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	6731613	6731614	TG	-	DEL	ZNF12	ENST00000405858	human	ensembl	74_37	-1	known	frame_shift_del	c.960_959	p.T320fs	0.989:0.997	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF12	HGNC	ENSG00000164631	tier1			67	0	0.00	61	8	11.59
ZNF137P	0	genome.wustl.edu	37	19	53091853	53091853	+	RNA	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	53091853	53091853	C	T	SNP	ZNF137P	ENST00000597158	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.101	-	-	-	no_errors	ZNF137P	HGNC	ENSG00000123870	tier1	-	-	14	0	0.00	16	10	38.46
ZNF142	0	genome.wustl.edu	37	2	219508084	219508084	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	219508084	219508084	C	-	DEL	ZNF142	ENST00000411696	human	ensembl	74_37	-1	known	frame_shift_del	c.3155	p.G1052fs	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF142	HGNC	ENSG00000115568	tier1			60	0	0.00	39	9	18.75
ZNF208	0	genome.wustl.edu	37	19	22156673	22156673	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	22156673	22156673	T	C	SNP	ZNF208	ENST00000397126	human	ensembl	74_37	-1	novel	missense	c.1163	p.K388R	0.006	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF208	HGNC	ENSG00000160321	tier1	-	-	63	0	0.00	44	10	18.52
ZNF223	0	genome.wustl.edu	37	19	44571252	44571253	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	44571252	44571253	-	A	INS	ZNF223	ENST00000591793	human	ensembl	74_37	+1	known	frame_shift_ins	c.1601_1602	p.P537fs	0.000:0.000	pfscan_Znf_C2H2	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF223	Uniprot_gn	ENSG00000267022	tier1			38	0	0.00	26	7	21.21
ZNF23	0	genome.wustl.edu	37	16	71482629	71482629	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	71482629	71482629	G	A	SNP	ZNF23	ENST00000357254	human	ensembl	74_37	-1	known	silent	c.1299	p.S433	0.001	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF23	HGNC	ENSG00000167377	tier1	-	-	77	0	0.00	50	26	34.21
ZNF236	0	genome.wustl.edu	37	18	74583780	74583780	+	Silent	SNP	A	A	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	74583780	74583780	A	C	SNP	ZNF236	ENST00000253159	human	ensembl	74_37	+1	known	silent	c.660	p.T220	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF236	HGNC	ENSG00000130856				38	0	0.00	32	5	13.51
ZNF251	0	genome.wustl.edu	37	8	145947906	145947906	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	145947906	145947906	T	A	SNP	ZNF251	ENST00000292562	human	ensembl	74_37	-1	known	missense	c.1139	p.N380I	0.004	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF251	HGNC	ENSG00000198169	tier1	-	-	33	0	0.00	32	25	43.86
ZNF268	0	genome.wustl.edu	37	12	133780995	133780995	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	133780995	133780995	G	C	SNP	ZNF268	ENST00000228289	human	ensembl	74_37	+1	known	missense	c.2723	p.S908T	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF268	HGNC	ENSG00000090612	tier1	-	-	33	0	0.00	18	3	14.29
ZNF271	0	genome.wustl.edu	37	18	32888075	32888078	+	RNA	DEL	AAAA	AAAA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AAAA	AAAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	32888075	32888078	AAAA	-	DEL	ZNF271	ENST00000399070	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.019:0.042:0.052:0.054	-	-	-	no_errors	ZNF271	HGNC	ENSG00000257267	tier1			73	0	0.00	55	9	14.06
ZNF277	0	genome.wustl.edu	37	7	111967771	111967771	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	111967771	111967771	G	T	SNP	ZNF277	ENST00000361822	human	ensembl	74_37	+1	known	splice_site	c.558-1	e6-1	1.000	-	-	-	no_errors	ZNF277	HGNC	ENSG00000198839	tier1	-	-	47	0	0.00	40	8	16.67
ZNF280B	0	genome.wustl.edu	37	22	22842653	22842653	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	22	22842653	22842653	C	T	SNP	ZNF280B	ENST00000360412	human	ensembl	74_37	-1	known	silent	c.1071	p.Q357	0.999	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF280B	HGNC	ENSG00000198477	tier1	-	-	81	0	0.00	69	11	13.75
ZNF282	0	genome.wustl.edu	37	7	148895518	148895518	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	148895518	148895518	C	T	SNP	ZNF282	ENST00000262085	human	ensembl	74_37	+1	known	nonsense	c.259	p.R87*	0.983	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_DUF3669_Znf,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF282	HGNC	ENSG00000170265	tier1	-	-	42	0	0.00	34	11	24.44
ZNF292	0	genome.wustl.edu	37	6	87966811	87966812	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	87966811	87966812	0	T	INS	ZNF292	ENST00000369577	human	ensembl	74_37	+1	known	frame_shift_ins	c.3464_3465	p.L1157fs	0.998:1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994				44	0	0.00	34	7	17.07
ZNF320	0	genome.wustl.edu	37	19	53391430	53391430	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	53391430	53391430	G	A	SNP	ZNF320	ENST00000391781	human	ensembl	74_37	-1	known	missense	c.92	p.T31I	0.005	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF320	HGNC	ENSG00000182986	tier1	-	-	88	0	0.00	63	16	20.25
ZNF326	0	genome.wustl.edu	37	1	90484280	90484280	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	90484280	90484280	C	T	SNP	ZNF326	ENST00000340281	human	ensembl	74_37	+1	known	missense	c.1111	p.R371C	1.000	pfam_AKAP95	pfam_AKAP95	-	no_errors	ZNF326	HGNC	ENSG00000162664	tier1	-	-	45	0	0.00	38	17	30.91
ZNF335	0	genome.wustl.edu	37	20	44588005	44588005	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	44588005	44588005	G	A	SNP	ZNF335	ENST00000322927	human	ensembl	74_37	-1	known	silent	c.2088	p.H696	0.990	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF335	HGNC	ENSG00000198026	tier1	-	-	54	0	0.00	28	14	33.33
ZNF34	0	genome.wustl.edu	37	8	145999587	145999587	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	145999587	145999587	T	-	DEL	ZNF34	ENST00000343459	human	ensembl	74_37	-1	known	frame_shift_del	c.747	p.K249fs	0.001	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF34	HGNC	ENSG00000196378	tier1			70	0	0.00	63	15	19.23
ZNF384	0	genome.wustl.edu	37	12	6788170	6788170	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	6788170	6788170	C	T	SNP	ZNF384	ENST00000361959	human	ensembl	74_37	-1	known	silent	c.246	p.A82	0.005	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF384	HGNC	ENSG00000126746				21	0	0.00	36	2	5.26
ZNF407	0	genome.wustl.edu	37	18	72589289	72589289	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	72589289	72589289	G	A	SNP	ZNF407	ENST00000299687	human	ensembl	74_37	+1	known	missense	c.5014	p.A1672T	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,smart_Znf_U1,pfscan_Znf_C2H2	-	no_errors	ZNF407	HGNC	ENSG00000215421	tier1	-	-	34	0	0.00	23	17	42.50
ZNF407	0	genome.wustl.edu	37	18	72632566	72632566	+	Silent	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	18	72632566	72632566	C	A	SNP	ZNF407	ENST00000299687	human	ensembl	74_37	+1	known	silent	c.5346	p.T1782	1.000	smart_Znf_C2H2-like	pfam_Znf_C2H2,smart_Znf_C2H2-like,smart_Znf_U1,pfscan_Znf_C2H2	-	no_errors	ZNF407	HGNC	ENSG00000215421	tier1	-	-	44	0	0.00	29	4	12.12
ZNF416	0	genome.wustl.edu	37	19	58083744	58083744	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	58083744	58083744	C	T	SNP	ZNF416	ENST00000196489	human	ensembl	74_37	-1	known	missense	c.1528	p.V510I	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF416	HGNC	ENSG00000083817	tier1	rs147696919	-	86	0	0.00	50	21	29.58
ZNF423	0	genome.wustl.edu	37	16	49669799	49669799	+	Silent	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	49669799	49669799	G	T	SNP	ZNF423	ENST00000262383	human	ensembl	74_37	-1	known	silent	c.3264	p.P1088	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF423	HGNC	ENSG00000102935	tier1	-	-	53	0	0.00	70	7	9.09
ZNF467	0	genome.wustl.edu	37	7	149462116	149462116	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	149462116	149462116	C	T	SNP	ZNF467	ENST00000302017	human	ensembl	74_37	-1	known	missense	c.1475	p.C492Y	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF467	HGNC	ENSG00000181444	tier1	-	-	46	0	0.00	11	5	31.25
ZNF469	0	genome.wustl.edu	37	16	88498417	88498417	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	88498417	88498417	C	T	SNP	ZNF469	ENST00000437464	human	ensembl	74_37	+1	known	silent	c.4455	p.S1485	0.002	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF469	HGNC	ENSG00000225614	tier1	-	-	31	0	0.00	19	7	26.92
ZNF470	0	genome.wustl.edu	37	19	57089372	57089372	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	57089372	57089372	G	A	SNP	ZNF470	ENST00000330619	human	ensembl	74_37	+1	known	silent	c.1575	p.A525	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF470	HGNC	ENSG00000197016	tier1	rs139141662	-	48	0	0.00	43	12	21.82
ZNF471	0	genome.wustl.edu	37	19	57035710	57035710	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	57035710	57035710	G	A	SNP	ZNF471	ENST00000308031	human	ensembl	74_37	+1	known	missense	c.274	p.V92M	0.074	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF471	HGNC	ENSG00000196263	tier1	-	-	100	0	0.00	53	29	35.37
ZNF485	0	genome.wustl.edu	37	10	44111987	44111987	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	44111987	44111987	G	A	SNP	ZNF485	ENST00000361807	human	ensembl	74_37	+1	known	missense	c.496	p.A166T	0.008	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF485	HGNC	ENSG00000198298	tier1	-	-	52	0	0.00	39	5	11.36
ZNF492	0	genome.wustl.edu	37	19	22846645	22846646	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	22846645	22846646	-	A	INS	ZNF492	ENST00000456783	human	ensembl	74_37	+1	known	frame_shift_ins	c.174_175	p.N60fs	0.000:0.001	NULL	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF492	HGNC	ENSG00000229676	tier1			66	0	0.00	40	4	9.09
ZNF497	0	genome.wustl.edu	37	19	58867645	58867645	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	58867645	58867645	G	A	SNP	ZNF497	ENST00000311044	human	ensembl	74_37	-1	known	missense	c.1357	p.R453C	0.047	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF497	HGNC	ENSG00000174586	tier1	-	-	18	0	0.00	14	6	30.00
ZNF500	0	genome.wustl.edu	37	16	4812297	4812297	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	4812297	4812297	G	A	SNP	ZNF500	ENST00000219478	human	ensembl	74_37	-1	known	missense	c.638	p.S213L	0.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF500	HGNC	ENSG00000103199	tier1	-	-	58	0	0.00	35	15	29.41
ZNF507	0	genome.wustl.edu	37	19	32844630	32844630	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	32844630	32844630	G	A	SNP	ZNF507	ENST00000311921	human	ensembl	74_37	+1	known	silent	c.894	p.A298	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF507	HGNC	ENSG00000168813	tier1	-	-	43	0	0.00	26	5	15.62
ZNF511	0	genome.wustl.edu	37	10	135165862	135165862	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	135165862	135165862	G	T	SNP	ZNF511	ENST00000368554	human	ensembl	74_37	+1	known	missense	c.851	p.R284M	0.000	NULL	smart_Znf_C2H2-like	-	no_errors	ZNF511	HGNC	ENSG00000198546	tier1	-	-	27	0	0.00	22	7	24.14
ZNF518A	0	genome.wustl.edu	37	10	97916214	97916214	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	97916214	97916214	A	-	DEL	ZNF518A	ENST00000478086	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.143	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853	tier1			83	0	0.00	54	7	11.48
ZNF518A	0	genome.wustl.edu	37	10	97918856	97918856	+	RNA	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	97918856	97918856	A	-	DEL	ZNF518A	ENST00000316045	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.867	-	-	-	no_errors	ZNF518A	HGNC	ENSG00000177853	tier1			22	0	0.00	17	12	41.38
ZNF530	0	genome.wustl.edu	37	19	58117515	58117515	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	58117515	58117515	C	T	SNP	ZNF530	ENST00000332854	human	ensembl	74_37	+1	known	nonsense	c.622	p.R208*	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF530	HGNC	ENSG00000183647	tier1	-	-	30	0	0.00	39	8	17.02
ZNF536	0	genome.wustl.edu	37	19	30934476	30934477	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	30934476	30934477	-	A	INS	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	frame_shift_ins	c.7_8	p.A4fs	1.000:1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597	tier1			58	0	0.00	25	10	28.57
ZNF541	0	genome.wustl.edu	37	19	48041514	48041514	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	48041514	48041514	G	-	DEL	ZNF541	ENST00000314121	human	ensembl	74_37	-1	known	frame_shift_del	c.3036	p.Y1013fs	0.894	NULL	pfam_ELM2_dom,pfam_Znf_C2H2,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_SANT/Myb,pfscan_ELM2_dom,pfscan_Znf_C2H2	-	no_errors	ZNF541	HGNC	ENSG00000118156	tier1			26	0	0.00	26	5	16.13
ZNF554	0	genome.wustl.edu	37	19	2834366	2834366	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	2834366	2834366	A	G	SNP	ZNF554	ENST00000317243	human	ensembl	74_37	+1	known	missense	c.1133	p.K378R	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF554	HGNC	ENSG00000172006	tier1	-	-	53	0	0.00	29	11	27.50
ZNF586	0	genome.wustl.edu	37	19	58291095	58291095	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	58291095	58291095	A	G	SNP	ZNF586	ENST00000396154	human	ensembl	74_37	+1	known	silent	c.1140	p.K380	0.881	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF586	HGNC	ENSG00000083828	tier1	-	-	43	0	0.00	44	8	15.38
ZNF607	0	genome.wustl.edu	37	19	38189877	38189877	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	38189877	38189877	A	G	SNP	ZNF607	ENST00000355202	human	ensembl	74_37	-1	known	silent	c.1155	p.G385	0.968	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF607	HGNC	ENSG00000198182	tier1	-	-	58	0	0.00	45	8	15.09
ZNF615	0	genome.wustl.edu	37	19	52505112	52505112	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	52505112	52505112	T	G	SNP	ZNF615	ENST00000594083	human	ensembl	74_37	-1	known	missense	c.192	p.E64D	0.022	superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF615	HGNC	ENSG00000197619	tier1	-	-	82	0	0.00	69	10	12.66
ZNF646	0	genome.wustl.edu	37	16	31090803	31090803	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	31090803	31090803	G	A	SNP	ZNF646	ENST00000300850	human	ensembl	74_37	+1	known	missense	c.3158	p.R1053H	0.216	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF646	HGNC	ENSG00000167395	tier1	rs140829625	-	38	0	0.00	31	11	26.19
ZNF648	0	genome.wustl.edu	37	1	182025992	182025992	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	182025992	182025992	G	A	SNP	ZNF648	ENST00000339948	human	ensembl	74_37	-1	novel	missense	c.1154	p.T385M	0.985	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF648	HGNC	ENSG00000179930	tier1	-	-	19	0	0.00	16	6	27.27
ZNF663P	0	genome.wustl.edu	37	20	45085292	45085292	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	20	45085292	45085292	T	-	DEL	ZNF663P	ENST00000400371	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF663P	HGNC	ENSG00000215452	tier1			49	0	0.00	34	18	34.62
ZNF668	0	genome.wustl.edu	37	16	31072399	31072399	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	31072399	31072399	C	A	SNP	ZNF668	ENST00000426488	human	ensembl	74_37	-1	known	missense	c.1919	p.G640V	0.816	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF668	HGNC	ENSG00000167394	tier1	-	-	103	0	0.00	86	13	13.00
ZNF671	0	genome.wustl.edu	37	19	58238904	58238904	+	RNA	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	58238904	58238904	G	A	SNP	ZNF671	ENST00000594803	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF671	HGNC	ENSG00000083814	tier1	-	-	91	0	0.00	75	13	14.77
ZNF687	0	genome.wustl.edu	37	1	151261173	151261173	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	151261173	151261173	T	C	SNP	ZNF687	ENST00000324048	human	ensembl	74_37	+1	known	missense	c.2285	p.V762A	0.966	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF687	HGNC	ENSG00000143373	tier1	-	-	63	0	0.00	35	15	30.00
ZNF687	0	genome.wustl.edu	37	1	151262391	151262391	+	Frame_Shift_Del	DEL	G	G	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	151262391	151262391	G	-	DEL	ZNF687	ENST00000324048	human	ensembl	74_37	+1	known	frame_shift_del	c.2872	p.P960fs	0.884	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF687	HGNC	ENSG00000143373	tier1			102	0	0.00	71	22	23.66
ZNF689	0	genome.wustl.edu	37	16	30615890	30615890	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	16	30615890	30615890	G	T	SNP	ZNF689	ENST00000287461	human	ensembl	74_37	-1	known	missense	c.1198	p.L400M	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF689	HGNC	ENSG00000156853	tier1	-	-	41	0	0.00	34	9	20.45
ZNF695	0	genome.wustl.edu	37	1	247163304	247163304	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	1	247163304	247163304	G	A	SNP	ZNF695	ENST00000339986	human	ensembl	74_37	-1	known	missense	c.76	p.R26W	0.691	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF695	HGNC	ENSG00000197472	tier1	-	-	87	0	0.00	62	16	20.51
ZNF703	0	genome.wustl.edu	37	8	37554830	37554830	+	Silent	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	37554830	37554830	C	T	SNP	ZNF703	ENST00000331569	human	ensembl	74_37	+1	known	silent	c.411	p.A137	0.378	NULL	pfam_Tscrpt_rep_NocA-like,pfscan_Znf_C2H2	-	no_errors	ZNF703	HGNC	ENSG00000183779	tier1	-	-	24	0	0.00	15	6	28.57
ZNF704	0	genome.wustl.edu	37	8	81550825	81550826	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	8	81550825	81550826	AA	-	DEL	ZNF704	ENST00000517379	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ZNF704	HGNC	ENSG00000164684	tier1			36	0	0.00	31	18	36.73
ZNF705A	0	genome.wustl.edu	37	12	8327007	8327007	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	12	8327007	8327007	G	A	SNP	ZNF705A	ENST00000359286	human	ensembl	74_37	+1	known	missense	c.98	p.R33K	0.866	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF705A	HGNC	ENSG00000196946	tier1	-	-	125	0	0.00	78	9	10.34
ZNF714	0	genome.wustl.edu	37	19	21300892	21300892	+	Silent	SNP	T	T	C			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	21300892	21300892	T	C	SNP	ZNF714	ENST00000596143	human	ensembl	74_37	+1	known	silent	c.1422	p.H474	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF714	HGNC	ENSG00000160352	tier1	-	-	48	0	0.00	22	17	43.59
ZNF717	0	genome.wustl.edu	37	3	75786865	75786865	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	75786865	75786865	G	A	SNP	ZNF717	ENST00000422325	human	ensembl	74_37	-1	known	missense	c.1909	p.H637Y	0.876	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF717	HGNC	ENSG00000227124	tier1	-	-	77	0	0.00	64	8	11.11
ZNF730	0	genome.wustl.edu	37	19	23316942	23316942	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	23316942	23316942	G	A	SNP	ZNF730	ENST00000597761	human	ensembl	74_37	+1	known	missense	c.64	p.D22N	0.022	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF730	HGNC	ENSG00000183850	tier1	-	-	115	0	0.00	86	22	20.37
ZNF746	0	genome.wustl.edu	37	7	149171653	149171653	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	7	149171653	149171653	C	T	SNP	ZNF746	ENST00000458143	human	ensembl	74_37	-1	known	missense	c.1760	p.R587H	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_DUF3669_Znf,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF746	HGNC	ENSG00000181220	tier1	-	-	44	0	0.00	35	8	18.60
ZNF76	0	genome.wustl.edu	37	6	35259168	35259168	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	35259168	35259168	C	T	SNP	ZNF76	ENST00000373953	human	ensembl	74_37	+1	known	missense	c.739	p.R247C	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF76	HGNC	ENSG00000065029	tier1	-	-	28	0	0.00	19	9	32.14
ZNF773	0	genome.wustl.edu	37	19	58018683	58018683	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	58018683	58018683	G	T	SNP	ZNF773	ENST00000282292	human	ensembl	74_37	+1	known	missense	c.1220	p.R407M	0.989	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF773	HGNC	ENSG00000152439	tier1	-	-	109	0	0.00	93	9	8.82
ZNF813	0	genome.wustl.edu	37	19	53994005	53994005	+	Silent	SNP	A	A	G			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	53994005	53994005	A	G	SNP	ZNF813	ENST00000396403	human	ensembl	74_37	+1	known	silent	c.519	p.S173	0.009	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF813	HGNC	ENSG00000198346	tier1	-	-	110	0	0.00	82	16	16.33
ZNF85	0	genome.wustl.edu	37	19	21131730	21131730	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	21131730	21131730	G	A	SNP	ZNF85	ENST00000328178	human	ensembl	74_37	+1	known	missense	c.410	p.C137Y	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF85	HGNC	ENSG00000105750	tier1	-	-	55	0	0.00	39	9	18.75
ZNF880	0	genome.wustl.edu	37	19	52888438	52888438	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	52888438	52888438	A	-	DEL	ZNF880	ENST00000422689	human	ensembl	74_37	+1	known	frame_shift_del	c.1605	p.K537fs	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF880	HGNC	ENSG00000221923	tier1			54	0	0.00	42	6	12.50
ZNF888	0	genome.wustl.edu	37	19	53418494	53418494	+	RNA	SNP	A	A	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	53418494	53418494	A	T	SNP	ZNF888	ENST00000454258	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.107	-	-	-	no_errors	ZNF888	HGNC	ENSG00000213793	tier1	-	-	180	0	0.00	151	27	15.17
ZNRD1	0	genome.wustl.edu	37	6	30030078	30030078	+	Silent	SNP	G	G	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	6	30030078	30030078	G	A	SNP	ZNRD1	ENST00000332435	human	ensembl	74_37	+1	known	silent	c.324	p.G108	0.991	pfam_Znf_TFIIS,smart_Znf_TFIIS,pfscan_Znf_TFIIS	pfam_Znf_TFIIS,smart_Znf_TFIIS,pfscan_Znf_TFIIS	-	no_errors	ZNRD1	HGNC	ENSG00000066379	tier1	-	-	45	0	0.00	65	5	7.04
ZRANB1	0	genome.wustl.edu	37	10	126670253	126670253	+	RNA	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	126670253	126670253	T	-	DEL	ZRANB1	ENST00000471421	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	ZRANB1	HGNC	ENSG00000019995	tier1			50	0	0.00	35	5	12.50
ZRANB3	0	genome.wustl.edu	37	2	135985510	135985510	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	135985510	135985510	T	-	DEL	ZRANB3	ENST00000264159	human	ensembl	74_37	-1	known	frame_shift_del	c.2030	p.K677fs	0.000	NULL	pfam_SNF2_N,pfam_Helicase_C,pfam_HNH,pfam_Znf_RanBP2,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Znf_RanBP2,smart_HNH_nuc,pfscan_Znf_RanBP2,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ZRANB3	HGNC	ENSG00000121988	tier1			89	0	0.00	83	12	12.63
ZRANB3	0	genome.wustl.edu	37	2	136103154	136103154	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	2	136103154	136103154	C	T	SNP	ZRANB3	ENST00000264159	human	ensembl	74_37	-1	known	missense	c.643	p.D215N	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_Helicase_C,pfam_HNH,pfam_Znf_RanBP2,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Znf_RanBP2,smart_HNH_nuc,pfscan_Znf_RanBP2,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ZRANB3	HGNC	ENSG00000121988	tier1	-	-	43	0	0.00	39	9	18.75
ZSCAN5C	0	genome.wustl.edu	37	19	56719852	56719853	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	19	56719852	56719853	0	A	INS	ZSCAN5C	ENST00000376267	human	ensembl	74_37	+1	known	frame_shift_ins	c.774_775	p.Q258fs	0.007:0.010	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN5C	HGNC	ENSG00000204532				85	0	0.00	49	15	23.44
ZSWIM8	0	genome.wustl.edu	37	10	75560546	75560547	+	RNA	DEL	CC	CC	-			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	10	75560546	75560547	CC	-	DEL	ZSWIM8	ENST00000603195	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.749:0.797	-	-	-	no_errors	ZSWIM8	HGNC	ENSG00000214655	tier1			107	0	0.00	98	39	28.47
ZXDC	0	genome.wustl.edu	37	3	126185160	126185160	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NM-01A-11D-A37C-09	TCGA-L5-A8NM-11A-12D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	04c9b5fa-4d01-4dd3-ae7f-b522a777bab5	947478b1-8569-4340-8891-abc84e887f22	3	126185160	126185160	C	T	SNP	ZXDC	ENST00000389709	human	ensembl	74_37	-1	known	missense	c.1279	p.A427T	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZXDC	HGNC	ENSG00000070476	tier1	-	-	49	0	0.00	26	11	29.73
