Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ACAP2	0	genome.wustl.edu	37	3	195022818	195022818	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	3	195022818	195022818	G	T	SNP	ACAP2	ENST00000326793	human	ensembl	74_37	-1	known	missense	c.1202	p.A401E	1.000	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ACAP2	HGNC	ENSG00000114331				37	0	0.00	31	2	6.06
ADAM21	0	genome.wustl.edu	37	14	70926242	70926242	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	14	70926242	70926242	G	T	SNP	ADAM21	ENST00000267499	human	ensembl	74_37	+1	known	missense	c.2026	p.A676S	0.922	NULL	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM21	HGNC	ENSG00000139985				67	0	0.00	41	3	6.82
AGAP3	0	genome.wustl.edu	37	7	150819833	150819833	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	150819833	150819833	T	C	SNP	AGAP3	ENST00000473312	human	ensembl	74_37	+1	known	missense	c.1150	p.F384L	1.000	NULL	pfam_MIRO-like,pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,prints_Small_GTPase	-	no_errors	AGAP3	HGNC	ENSG00000133612	tier1	-	-	96	0	0.00	55	30	35.29
AHSP	0	genome.wustl.edu	37	16	31539471	31539471	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	16	31539471	31539471	T	A	SNP	AHSP	ENST00000302312	human	ensembl	74_37	+1	known	missense	c.11	p.L4H	0.960	superfamily_A_Hb_stabilising_prot	pfam_A_Hb_stabilising_prot,superfamily_A_Hb_stabilising_prot	-	no_errors	AHSP	HGNC	ENSG00000169877	tier1	-	-	43	0	0.00	25	8	24.24
AKR1CL1	0	genome.wustl.edu	37	10	5199923	5199923	+	Silent	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	10	5199923	5199923	G	T	SNP	AKR1CL1	ENST00000473890	human	ensembl	74_37	-1	novel	silent	c.243	p.G81	0.332	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1CL1	HGNC	ENSG00000196326	tier1	-	-	54	0	0.00	70	4	5.41
ALOX5AP	0	genome.wustl.edu	37	13	31338241	31338241	+	Nonstop_Mutation	SNP	T	T	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	13	31338241	31338241	T	A	SNP	ALOX5AP	ENST00000380490	human	ensembl	74_37	+1	known	nonstop	c.484	p.*162K	0.989	NULL	pfam_Membr-assoc_MAPEG,prints_5_LipOase_AP	-	no_errors	ALOX5AP	HGNC	ENSG00000132965	tier1	-	-	87	0	0.00	20	40	66.67
ANKRD33B	0	genome.wustl.edu	37	5	10649560	10649560	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	10649560	10649560	G	A	SNP	ANKRD33B	ENST00000296657	human	ensembl	74_37	+1	novel	missense	c.820	p.A274T	0.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD33B	HGNC	ENSG00000164236	tier1	-	-	32	0	0.00	7	17	70.83
ANO5	0	genome.wustl.edu	37	11	22279255	22279255	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	22279255	22279255	G	A	SNP	ANO5	ENST00000324559	human	ensembl	74_37	+1	known	silent	c.1362	p.T454	0.038	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO5	HGNC	ENSG00000171714	tier1	-	-	69	0	0.00	69	25	26.60
ANP32AP1	0	genome.wustl.edu	37	15	35530357	35530357	+	RNA	DEL	T	T	-			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	15	35530357	35530357	T	-	DEL	ANP32AP1	ENST00000560832	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	ANP32AP1	HGNC	ENSG00000259516	tier1			41	0	0.00	30	2	6.25
ANXA5	0	genome.wustl.edu	37	4	122607522	122607522	+	Silent	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	122607522	122607522	G	T	SNP	ANXA5	ENST00000296511	human	ensembl	74_37	-1	known	silent	c.15	p.L5	0.199	NULL	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinV,prints_AnnexinIV	-	no_errors	ANXA5	HGNC	ENSG00000164111	tier1	-	-	42	0	0.00	22	3	12.00
APC	0	genome.wustl.edu	37	5	112174268	112174268	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	112174268	112174268	A	C	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	missense	c.2977	p.K993Q	1.000	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982	tier1	-	-	49	0	0.00	31	13	29.55
ARAP2	0	genome.wustl.edu	37	4	36212335	36212335	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	36212335	36212335	G	A	SNP	ARAP2	ENST00000303965	human	ensembl	74_37	-1	known	silent	c.1164	p.S388	0.810	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_SAM_2,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP2	HGNC	ENSG00000047365	tier1	-	-	23	0	0.00	25	5	16.67
ARHGAP20	0	genome.wustl.edu	37	11	110501395	110501395	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	110501395	110501395	C	T	SNP	ARHGAP20	ENST00000260283	human	ensembl	74_37	-1	known	silent	c.309	p.R103	0.635	smart_Pleckstrin_homology	pfam_RhoGAP_dom,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_Ras-assoc,pfscan_RhoGAP_dom	-	no_errors	ARHGAP20	HGNC	ENSG00000137727				46	0	0.00	47	3	6.00
ARHGEF10L	0	genome.wustl.edu	37	1	18021674	18021674	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	18021674	18021674	C	T	SNP	ARHGEF10L	ENST00000361221	human	ensembl	74_37	+1	known	missense	c.3206	p.T1069I	1.000	superfamily_WD40_repeat_dom	pfam_DH-domain,superfamily_DH-domain,superfamily_WD40_repeat_dom,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF10L	HGNC	ENSG00000074964				77	0	0.00	62	4	6.06
ARID2	0	genome.wustl.edu	37	12	46211623	46211623	+	Frame_Shift_Del	DEL	C	C	-			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	12	46211623	46211623	C	-	DEL	ARID2	ENST00000334344	human	ensembl	74_37	+1	known	frame_shift_del	c.589	p.P197fs	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,pfam_DNA-bd_RFX,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID2	HGNC	ENSG00000189079	tier1			27	0	0.00	5	19	79.17
ASXL3	0	genome.wustl.edu	37	18	31326085	31326085	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	18	31326085	31326085	C	T	SNP	ASXL3	ENST00000269197	human	ensembl	74_37	+1	known	silent	c.6273	p.S2091	1.000	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL3	HGNC	ENSG00000141431				29	0	0.00	28	3	9.68
ATXN3	0	genome.wustl.edu	37	14	92563080	92563080	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	14	92563080	92563080	C	G	SNP	ATXN3	ENST00000545170	human	ensembl	74_37	-1	known	missense	c.127	p.E43Q	1.000	pfam_Josephin,pfscan_Josephin	pfam_Josephin,pfam_Ubiquitin-int_motif,smart_Ubiquitin-int_motif,pfscan_Josephin,pfscan_Ubiquitin-int_motif,prints_Josephin	-	no_errors	ATXN3	HGNC	ENSG00000066427	tier1	-	-	48	0	0.00	62	4	5.97
BACH1	0	genome.wustl.edu	37	21	30714989	30714989	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	21	30714989	30714989	C	T	SNP	BACH1	ENST00000286800	human	ensembl	74_37	+1	known	silent	c.2046	p.P682	0.008	NULL	pfam_BTB_POZ,pfam_bZIP,superfamily_BTB/POZ_fold,superfamily_TF_DNA-bd,smart_BTB/POZ-like,smart_bZIP,pfscan_BTB/POZ-like,pfscan_bZIP	-	no_errors	BACH1	HGNC	ENSG00000156273	tier1	-	-	28	0	0.00	12	5	29.41
BIRC2	0	genome.wustl.edu	37	11	102233653	102233653	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	102233653	102233653	G	A	SNP	BIRC2	ENST00000227758	human	ensembl	74_37	+1	known	missense	c.1022	p.G341D	0.982	NULL	pfam_BIR,pfam_CARD,superfamily_DEATH-like_dom,smart_BIR,smart_CARD,smart_Znf_RING,pfscan_CARD,pfscan_BIR,pfscan_Znf_RING	-	no_errors	BIRC2	HGNC	ENSG00000110330	tier1	-	-	31	0	0.00	24	11	31.43
BIVM	0	genome.wustl.edu	37	13	103473443	103473443	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	13	103473443	103473443	C	A	SNP	BIVM	ENST00000257336	human	ensembl	74_37	+1	known	missense	c.662	p.S221Y	1.000	NULL	NULL	-	no_errors	BIVM	HGNC	ENSG00000134897	tier1	-	-	62	0	0.00	19	31	62.00
BRINP1	0	genome.wustl.edu	37	9	122075482	122075482	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	9	122075482	122075482	G	T	SNP	BRINP1	ENST00000265922	human	ensembl	74_37	-1	known	missense	c.152	p.S51Y	1.000	pfam_MACPF	pfam_MACPF,smart_MACPF	-	no_errors	BRINP1	HGNC	ENSG00000078725				47	0	0.00	30	2	6.25
BTAF1	0	genome.wustl.edu	37	10	93778666	93778666	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	10	93778666	93778666	G	A	SNP	BTAF1	ENST00000265990	human	ensembl	74_37	+1	known	missense	c.4837	p.A1613T	1.000	superfamily_P-loop_NTPase	pfam_DUF3535,pfam_SNF2_N,pfam_HEAT,pfam_Helicase_C,superfamily_ARM-type_fold,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	BTAF1	HGNC	ENSG00000095564	tier1	-	-	52	0	0.00	46	4	8.00
C12orf54	0	genome.wustl.edu	37	12	48882278	48882279	+	RNA	INS	-	-	AC			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	12	48882278	48882279	-	AC	INS	C12orf54	ENST00000548913	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.033:0.007	-	-	-	no_errors	C12orf54	HGNC	ENSG00000177627	tier1			13	0	0.00	31	9	22.50
C18orf42	0	genome.wustl.edu	37	18	5145754	5145754	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	18	5145754	5145754	C	T	SNP	C18orf42	ENST00000434239	human	ensembl	74_37	-1	known	missense	c.17	p.G6D	1.000	NULL	pfam_Kinase-A_anchor_RI-RII-bd_dom	-	no_errors	C18orf42	HGNC	ENSG00000231824	tier1	-	-	37	0	0.00	20	19	48.72
C19orf68	0	genome.wustl.edu	37	19	48698086	48698086	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	19	48698086	48698086	G	A	SNP	C19orf68	ENST00000328759	human	ensembl	74_37	+1	known	silent	c.765	p.A255	0.702	NULL	NULL	-	no_errors	C19orf68	HGNC	ENSG00000185453				41	0	0.00	31	20	38.46
C22orf26	0	genome.wustl.edu	37	22	46449698	46449698	+	Silent	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	22	46449698	46449698	C	A	SNP	C22orf26	ENST00000333761	human	ensembl	74_37	-1	known	silent	c.276	p.R92	0.997	NULL	NULL	-	no_errors	C22orf26	HGNC	ENSG00000182257				29	0	0.00	15	5	25.00
C4orf50	0	genome.wustl.edu	37	4	5990473	5990473	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	5990473	5990473	C	T	SNP	C4orf50	ENST00000531445	human	ensembl	74_37	-1	known	silent	c.1026	p.E342	0.176	NULL	NULL	-	no_errors	C4orf50	HGNC	ENSG00000181215	tier1	-	-	51	0	0.00	24	7	22.58
C7orf72	0	genome.wustl.edu	37	7	50135836	50135836	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	50135836	50135836	A	C	SNP	C7orf72	ENST00000297001	human	ensembl	74_37	+1	known	missense	c.155	p.N52T	0.020	NULL	NULL	-	no_errors	C7orf72	HGNC	ENSG00000164500	tier1	-	-	67	0	0.00	41	32	43.84
C9orf156	0	genome.wustl.edu	37	9	100684711	100684711	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	9	100684711	100684711	G	A	SNP	C9orf156	ENST00000375119	human	ensembl	74_37	-1	known	missense	c.65	p.A22V	0.579	NULL	pfam_UPF0066,superfamily_UPF0066_YaeB,tigrfam_UPF0066	-	no_errors	C9orf156	HGNC	ENSG00000136932	tier1	-	-	153	0	0.00	46	82	63.57
CA11	0	genome.wustl.edu	37	19	49142863	49142863	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	19	49142863	49142863	T	G	SNP	CA11	ENST00000084798	human	ensembl	74_37	-1	known	missense	c.583	p.N195H	0.999	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA11	HGNC	ENSG00000063180	tier1	-	-	54	0	0.00	50	5	9.09
CABIN1	0	genome.wustl.edu	37	22	24479285	24479285	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	22	24479285	24479285	C	T	SNP	CABIN1	ENST00000263119	human	ensembl	74_37	+1	known	silent	c.2853	p.Y951	0.999	NULL	pfam_MEF2_binding,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	CABIN1	HGNC	ENSG00000099991	tier1	-	-	25	0	0.00	15	3	16.67
CAPN11	0	genome.wustl.edu	37	6	44145038	44145038	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	6	44145038	44145038	G	T	SNP	CAPN11	ENST00000398776	human	ensembl	74_37	+1	known	missense	c.1297	p.D433Y	0.902	pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Calpain_III	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,smart_EF_hand_dom,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN11	HGNC	ENSG00000137225	tier1	-	-	26	0	0.00	29	4	12.12
CASP5	0	genome.wustl.edu	37	11	104878041	104878041	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	104878041	104878041	T	-	DEL	CASP5	ENST00000393141	human	ensembl	74_37	-1	known	frame_shift_del	c.241	p.T81fs	0.000	pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,pirsf_Caspase_IL-1_beta,pfscan_CARD	pfam_Pept_C14_caspase,pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP5	HGNC	ENSG00000137757	tier1			41	0	0.00	39	4	9.30
CASP6	0	genome.wustl.edu	37	4	110610548	110610548	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	110610548	110610548	G	A	SNP	CASP6	ENST00000265164	human	ensembl	74_37	-1	known	nonsense	c.820	p.Q274*	1.000	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pfscan_Pept_C14_p10	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP6	HGNC	ENSG00000138794	tier1	-	-	59	0	0.00	40	16	28.57
CC2D2A	0	genome.wustl.edu	37	4	15565108	15565108	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	15565108	15565108	C	T	SNP	CC2D2A	ENST00000413206	human	ensembl	74_37	+1	known	nonsense	c.3145	p.R1049*	0.994	superfamily_C2_dom,smart_C2_dom	superfamily_C2_dom,smart_C2_dom	-	no_errors	CC2D2A	HGNC	ENSG00000048342				37	0	0.00	34	2	5.56
CCDC126	0	genome.wustl.edu	37	7	23650854	23650855	+	RNA	INS	-	-	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	23650854	23650855	-	T	INS	CCDC126	ENST00000486109	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001:0.020	-	-	-	no_errors	CCDC126	HGNC	ENSG00000169193	tier1			24	0	0.00	28	4	12.50
CCDC175	0	genome.wustl.edu	37	14	59978519	59978519	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	14	59978519	59978519	G	A	SNP	CCDC175	ENST00000281581	human	ensembl	74_37	-1	known	nonsense	c.2101	p.Q701*	0.005	NULL	superfamily_Prefoldin	-	no_errors	CCDC175	HGNC	ENSG00000151838	tier1	-	-	72	0	0.00	71	4	5.33
CCP110	0	genome.wustl.edu	37	16	19556498	19556498	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	16	19556498	19556498	G	A	SNP	CCP110	ENST00000381396	human	ensembl	74_37	+1	known	missense	c.2669	p.R890Q	1.000	NULL	NULL	-	no_errors	CCP110	HGNC	ENSG00000103540				38	0	0.00	33	2	5.71
CDAN1	0	genome.wustl.edu	37	15	43016780	43016780	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	15	43016780	43016780	A	G	SNP	CDAN1	ENST00000356231	human	ensembl	74_37	-1	known	missense	c.3593	p.L1198P	0.668	NULL	NULL	-	no_errors	CDAN1	HGNC	ENSG00000140326				67	0	0.00	54	3	5.26
CDCA5	0	genome.wustl.edu	37	11	64847073	64847073	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	64847073	64847073	G	A	SNP	CDCA5	ENST00000275517	human	ensembl	74_37	-1	known	missense	c.430	p.R144C	0.993	pfam_Sororin	pfam_Sororin	-	no_errors	CDCA5	HGNC	ENSG00000146670	tier1	-	-	41	0	0.00	42	10	19.23
CDKN2A	0	genome.wustl.edu	37	9	21974724	21974724	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	9	21974724	21974724	C	T	SNP	CDKN2A	ENST00000446177	human	ensembl	74_37	-1	known	missense	c.103	p.G35R	0.998	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	CDKN2A	HGNC	ENSG00000147889				46	0	0.00	37	4	9.76
CELA3A	0	genome.wustl.edu	37	1	22333419	22333419	+	Silent	SNP	T	T	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	22333419	22333419	T	C	SNP	CELA3A	ENST00000290122	human	ensembl	74_37	+1	known	silent	c.411	p.D137	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CELA3A	HGNC	ENSG00000142789	tier1	rs138658162	-	89	0	0.00	41	12	22.64
CHGA	0	genome.wustl.edu	37	14	93398760	93398760	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	14	93398760	93398760	C	T	SNP	CHGA	ENST00000216492	human	ensembl	74_37	+1	known	missense	c.854	p.A285V	0.028	pfam_Granin	pfam_Granin,prints_Chromogranin_AB	-	no_errors	CHGA	HGNC	ENSG00000100604	tier1	-	-	123	0	0.00	79	13	14.13
CHST15	0	genome.wustl.edu	37	10	125771863	125771863	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	10	125771863	125771863	T	A	SNP	CHST15	ENST00000346248	human	ensembl	74_37	-1	known	missense	c.1481	p.Q494L	0.999	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	CHST15	HGNC	ENSG00000182022				51	0	0.00	33	3	8.33
CLPTM1L	0	genome.wustl.edu	37	5	1330411	1330411	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	1330411	1330411	A	T	SNP	CLPTM1L	ENST00000320895	human	ensembl	74_37	-1	known	missense	c.1064	p.V355D	0.249	pfam_CLPTM1	pfam_CLPTM1	-	no_errors	CLPTM1L	HGNC	ENSG00000049656	tier1	-	-	76	0	0.00	42	4	8.70
CMTM5	0	genome.wustl.edu	37	14	23848315	23848315	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	14	23848315	23848315	G	T	SNP	CMTM5	ENST00000339180	human	ensembl	74_37	+1	known	missense	c.556	p.A186S	1.000	NULL	NULL	-	no_errors	CMTM5	HGNC	ENSG00000166091	tier1	-	-	60	0	0.00	60	21	25.61
CNGA3	0	genome.wustl.edu	37	2	99013128	99013128	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	2	99013128	99013128	C	T	SNP	CNGA3	ENST00000272602	human	ensembl	74_37	+1	known	nonsense	c.1495	p.R499*	0.999	superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGA3	HGNC	ENSG00000144191	tier1	-	-	20	0	0.00	22	4	15.38
COL14A1	0	genome.wustl.edu	37	8	121256240	121256240	+	Silent	SNP	A	A	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	8	121256240	121256240	A	G	SNP	COL14A1	ENST00000297848	human	ensembl	74_37	+1	known	silent	c.2472	p.G824	0.986	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_VWF_A,pfam_Fibronectin_type3,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL14A1	HGNC	ENSG00000187955	tier1	-	-	33	0	0.00	18	6	25.00
COL6A1	0	genome.wustl.edu	37	21	47421897	47421897	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	21	47421897	47421897	C	T	SNP	COL6A1	ENST00000361866	human	ensembl	74_37	+1	known	missense	c.1979	p.A660V	0.105	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A1	HGNC	ENSG00000142156	tier1	-	-	17	0	0.00	5	11	68.75
CPA3	0	genome.wustl.edu	37	3	148583320	148583320	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	3	148583320	148583320	G	T	SNP	CPA3	ENST00000296046	human	ensembl	74_37	+1	known	missense	c.129	p.L43F	0.983	pfam_Prot_inh_M14A,superfamily_Prot_inh_propept	pfam_Peptidase_M14,pfam_Prot_inh_M14A,superfamily_Prot_inh_propept,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPA3	HGNC	ENSG00000163751				34	0	0.00	38	2	5.00
CSF1R	0	genome.wustl.edu	37	5	149449556	149449556	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	149449556	149449556	G	T	SNP	CSF1R	ENST00000286301	human	ensembl	74_37	-1	known	missense	c.1390	p.H464N	0.997	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	CSF1R	HGNC	ENSG00000182578	tier1	-	-	50	0	0.00	40	4	9.09
CTNND1	0	genome.wustl.edu	37	11	57575738	57575738	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	57575738	57575738	C	T	SNP	CTNND1	ENST00000399050	human	ensembl	74_37	+1	known	nonsense	c.2065	p.Q689*	1.000	superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND1	HGNC	ENSG00000198561	tier1	-	-	57	0	0.00	43	17	28.33
CUL9	0	genome.wustl.edu	37	6	43188266	43188266	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	6	43188266	43188266	G	T	SNP	CUL9	ENST00000252050	human	ensembl	74_37	+1	known	missense	c.6352	p.A2118S	0.972	NULL	pfam_Cullin_N,pfam_CPH_domain,pfam_Znf_C6HC,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,superfamily_UBA-like,smart_Cullin_neddylation_domain,smart_Znf_C6HC,pfscan_Znf_RING,pfscan_Cullin_homology	-	no_errors	CUL9	HGNC	ENSG00000112659	tier1	-	-	53	0	0.00	60	4	6.15
CWH43	0	genome.wustl.edu	37	4	48996764	48996764	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	48996764	48996764	G	T	SNP	CWH43	ENST00000226432	human	ensembl	74_37	+1	known	nonsense	c.640	p.G214*	1.000	NULL	superfamily_Endo/exonuclease/phosphatase	-	no_errors	CWH43	HGNC	ENSG00000109182	tier1	-	-	79	0	0.00	87	5	5.43
CYP2S1	0	genome.wustl.edu	37	19	41704729	41704729	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	19	41704729	41704729	G	A	SNP	CYP2S1	ENST00000310054	human	ensembl	74_37	+1	known	missense	c.770	p.G257E	0.025	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450_E_grp-I_CYP2B-like,prints_Cyt_P450_B	-	no_errors	CYP2S1	HGNC	ENSG00000167600	tier1	-	-	50	0	0.00	32	18	36.00
DAAM2	0	genome.wustl.edu	37	6	39847239	39847239	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	6	39847239	39847239	G	T	SNP	DAAM2	ENST00000274867	human	ensembl	74_37	+1	known	missense	c.1831	p.V611L	0.999	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	DAAM2	HGNC	ENSG00000146122				67	0	0.00	60	4	6.25
DCHS2	0	genome.wustl.edu	37	4	155219058	155219058	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	155219058	155219058	C	A	SNP	DCHS2	ENST00000357232	human	ensembl	74_37	-1	known	missense	c.5043	p.K1681N	0.000	smart_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410	tier1	-	-	44	0	0.00	26	10	27.78
DHX58	0	genome.wustl.edu	37	17	40257821	40257821	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	17	40257821	40257821	G	T	SNP	DHX58	ENST00000251642	human	ensembl	74_37	-1	known	missense	c.1184	p.T395N	0.002	superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_RIG-I_C-RD,pfam_Helicase/UvrB_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX58	HGNC	ENSG00000108771				20	0	0.00	38	4	9.52
DLG1	0	genome.wustl.edu	37	3	196863547	196863547	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	3	196863547	196863547	G	T	SNP	DLG1	ENST00000346964	human	ensembl	74_37	-1	known	missense	c.985	p.L329I	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_M-assoc_guanylate_kinase,pfscan_PDZ	pfam_GK/Ca_channel_bsu,pfam_PDZ,pfam_MAGUK_PEST_N,pfam_L27_1,pfam_PDZ_assoc,pfam_SH3_2,pfam_SH3_domain,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pirsf_M-assoc_guanylate_kinase,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG1	HGNC	ENSG00000075711	tier1	-	-	39	0	0.00	35	4	10.26
DLX3	0	genome.wustl.edu	37	17	48069206	48069206	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	17	48069206	48069206	C	T	SNP	DLX3	ENST00000434704	human	ensembl	74_37	-1	known	missense	c.539	p.R180H	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	pfam_Distal-less_N,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DLX3	HGNC	ENSG00000064195	tier1	-	-	29	0	0.00	31	16	34.04
DNAH5	0	genome.wustl.edu	37	5	13885264	13885264	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	13885264	13885264	C	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	silent	c.2817	p.T939	0.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	39	0	0.00	17	14	45.16
DNAH5	0	genome.wustl.edu	37	5	13922278	13922278	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	13922278	13922278	A	T	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.598	p.L200M	0.991	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	50	0	0.00	27	4	12.90
DNAH6	0	genome.wustl.edu	37	2	84800703	84800703	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	2	84800703	84800703	A	T	SNP	DNAH6	ENST00000237449	human	ensembl	74_37	+1	known	missense	c.1916	p.Q639L	0.946	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH6	HGNC	ENSG00000115423				33	0	0.00	32	2	5.88
DNAH9	0	genome.wustl.edu	37	17	11642318	11642318	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	17	11642318	11642318	G	A	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	missense	c.5936	p.R1979H	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174				68	0	0.00	56	4	6.67
DNM1P47	0	genome.wustl.edu	37	15	102304789	102304791	+	RNA	DEL	GAA	GAA	-			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	15	102304789	102304791	GAA	-	DEL	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.066:0.054:0.028	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1			68	0	0.00	27	16	37.21
DPP6	0	genome.wustl.edu	37	7	154595588	154595588	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	154595588	154595588	C	T	SNP	DPP6	ENST00000377770	human	ensembl	74_37	+1	known	silent	c.1422	p.N474	0.697	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_PD40	-	no_errors	DPP6	HGNC	ENSG00000130226				45	0	0.00	37	4	9.52
DYNC2H1	0	genome.wustl.edu	37	11	103027166	103027166	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	103027166	103027166	G	A	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.3794	p.R1265H	1.000	pfam_Dynein_heavy_dom-2	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	rs200635842	-	54	0	0.00	49	6	10.91
EBAG9	0	genome.wustl.edu	37	8	110569206	110569206	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	8	110569206	110569206	G	T	SNP	EBAG9	ENST00000337573	human	ensembl	74_37	+1	known	missense	c.364	p.D122Y	1.000	pirsf_Cancer-assoc_antigen_RCAS1	pirsf_Cancer-assoc_antigen_RCAS1	-	no_errors	EBAG9	HGNC	ENSG00000147654	tier1	-	-	67	0	0.00	67	4	5.63
ECHS1	0	genome.wustl.edu	37	10	135183459	135183459	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	10	135183459	135183459	G	T	SNP	ECHS1	ENST00000368547	human	ensembl	74_37	-1	known	missense	c.363	p.D121E	0.971	pfam_Crotonase_core_superfam	pfam_Crotonase_core_superfam	-	no_errors	ECHS1	HGNC	ENSG00000127884	tier1	-	-	58	0	0.00	45	5	10.00
ELL3	0	genome.wustl.edu	37	15	44066533	44066533	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	15	44066533	44066533	G	A	SNP	ELL3	ENST00000319359	human	ensembl	74_37	-1	known	silent	c.885	p.H295	0.952	pfam_Occludin_RNApol2_elong_fac_ELL	pfam_RNA_pol_II_elong_fac_ELL,pfam_Occludin_RNApol2_elong_fac_ELL	-	no_errors	ELL3	HGNC	ENSG00000128886	tier1	-	-	47	0	0.00	48	4	7.69
ELMO1	0	genome.wustl.edu	37	7	37256263	37256263	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	37256263	37256263	G	A	SNP	ELMO1	ENST00000310758	human	ensembl	74_37	-1	known	missense	c.818	p.S273F	1.000	pfam_DUF3361	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO1	HGNC	ENSG00000155849	tier1	-	-	42	0	0.00	9	24	72.73
ENSG00000204791	0	genome.wustl.edu	37	8	145106131	145106131	+	RNA	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	8	145106131	145106131	C	T	SNP	ENSG00000204791	ENST00000528912	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-3065J16.6	Clone_based_vega_gene	ENSG00000204791	tier1	-	-	39	0	0.00	19	23	54.76
ENSG00000216127	0	genome.wustl.edu	37	5	171866687	171866688	+	RNA	DEL	CA	CA	-			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	171866687	171866688	CA	-	DEL	ENSG00000216127	ENST00000401308	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.026:0.017	-	-	-	no_errors	AC011407.1	Clone_based_ensembl_gene	ENSG00000216127	tier1			29	0	0.00	19	4	17.39
ENSG00000225411	0	genome.wustl.edu	37	9	68400495	68400495	+	RNA	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	9	68400495	68400495	C	T	SNP	ENSG00000225411	ENST00000417843	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.113	-	-	-	no_errors	RP11-764K9.1	Clone_based_vega_gene	ENSG00000225411	tier1	-	-	16	0	0.00	6	5	45.45
ENSG00000233175	0	genome.wustl.edu	37	17	43315899	43315899	+	RNA	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	17	43315899	43315899	G	T	SNP	ENSG00000233175	ENST00000587534	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CTD-2020K17.3	Clone_based_vega_gene	ENSG00000233175	tier1	-	-	65	0	0.00	72	4	5.26
ENSG00000236233	0	genome.wustl.edu	37	9	67793766	67793766	+	RNA	DEL	A	A	-			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	9	67793766	67793766	A	-	DEL	ENSG00000236233	ENST00000315762	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	RP11-12A20.7	Clone_based_vega_gene	ENSG00000236233	tier1			17	0	0.00	11	5	31.25
ENSG00000266026	0	genome.wustl.edu	37	12	8382432	8382432	+	RNA	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	12	8382432	8382432	C	T	SNP	ENSG00000266026	ENST00000583174	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.017	-	-	-	no_errors	AC092111.1	Clone_based_ensembl_gene	ENSG00000266026	tier1	-	-	36	0	0.00	49	6	10.91
EPHB3	0	genome.wustl.edu	37	3	184299079	184299079	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	3	184299079	184299079	A	G	SNP	EPHB3	ENST00000330394	human	ensembl	74_37	+1	known	missense	c.2771	p.Y924C	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB3	HGNC	ENSG00000182580				31	0	0.00	30	5	14.29
ETV4	0	genome.wustl.edu	37	17	41622356	41622356	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	17	41622356	41622356	C	T	SNP	ETV4	ENST00000319349	human	ensembl	74_37	-1	known	silent	c.189	p.T63	1.000	pfam_ETS_PEA3_N	pfam_ETS_PEA3_N,pfam_Ets_dom,smart_Ets_dom,prints_Ets_dom,pfscan_Ets_dom	-	no_errors	ETV4	HGNC	ENSG00000175832	tier1	-	-	43	0	0.00	62	6	8.82
F2RL2	0	genome.wustl.edu	37	5	75913661	75913661	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	75913661	75913661	C	A	SNP	F2RL2	ENST00000296641	human	ensembl	74_37	-1	known	missense	c.871	p.A291S	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Prot_act_rcpt_3,prints_GPCR_Rhodpsn,prints_Protea_act_rcpt	-	no_errors	F2RL2	HGNC	ENSG00000164220				38	0	0.00	51	3	5.56
FAM102A	0	genome.wustl.edu	37	9	130705463	130705463	+	RNA	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	9	130705463	130705463	C	A	SNP	FAM102A	ENST00000300434	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.023	-	-	-	no_errors	FAM102A	HGNC	ENSG00000167106	tier1	-	-	50	0	0.00	23	24	51.06
FAM199X	0	genome.wustl.edu	37	X	103420452	103420452	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	X	103420452	103420452	A	G	SNP	FAM199X	ENST00000493442	human	ensembl	74_37	+1	known	missense	c.346	p.S116G	1.000	NULL	NULL	-	no_errors	FAM199X	HGNC	ENSG00000123575				37	0	0.00	74	4	5.06
FAM91A1	0	genome.wustl.edu	37	8	124797873	124797873	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	8	124797873	124797873	C	T	SNP	FAM91A1	ENST00000334705	human	ensembl	74_37	+1	known	missense	c.854	p.A285V	1.000	NULL	NULL	-	no_errors	FAM91A1	HGNC	ENSG00000176853	tier1	-	-	49	0	0.00	47	4	7.84
FAP	0	genome.wustl.edu	37	2	163027548	163027548	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	2	163027548	163027548	T	A	SNP	FAP	ENST00000188790	human	ensembl	74_37	-1	known	missense	c.2224	p.N742Y	0.037	pfam_Peptidase_S9	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	FAP	HGNC	ENSG00000078098	tier1	-	-	43	0	0.00	26	9	25.71
FAT4	0	genome.wustl.edu	37	4	126238185	126238185	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	126238185	126238185	G	T	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	nonsense	c.619	p.G207*	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				42	0	0.00	23	3	11.54
FBXO34	0	genome.wustl.edu	37	14	55818138	55818138	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	14	55818138	55818138	G	A	SNP	FBXO34	ENST00000313833	human	ensembl	74_37	+1	known	missense	c.1030	p.G344R	0.003	NULL	superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO34	HGNC	ENSG00000178974	tier1	-	-	31	0	0.00	22	12	35.29
FBXW7	0	genome.wustl.edu	37	4	153252003	153252003	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	153252003	153252003	G	A	SNP	FBXW7	ENST00000281708	human	ensembl	74_37	-1	known	missense	c.1003	p.H335Y	1.000	superfamily_F-box_dom	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW7	HGNC	ENSG00000109670	tier1	-	-	56	0	0.00	61	4	6.15
FNTA	0	genome.wustl.edu	37	8	42919271	42919271	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	8	42919271	42919271	C	T	SNP	FNTA	ENST00000302279	human	ensembl	74_37	+1	known	missense	c.314	p.A105V	1.000	NULL	pfam_Prenyl_trans_a,pfscan_Prenyl_trans_a	-	no_errors	FNTA	HGNC	ENSG00000168522	tier1	-	-	60	0	0.00	58	4	6.45
FOLH1B	0	genome.wustl.edu	37	11	89392887	89392887	+	RNA	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	89392887	89392887	C	A	SNP	FOLH1B	ENST00000525540	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FOLH1B	HGNC	ENSG00000134612	tier1	-	-	98	0	0.00	66	33	33.33
FREM3	0	genome.wustl.edu	37	4	144618921	144618921	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	144618921	144618921	C	A	SNP	FREM3	ENST00000329798	human	ensembl	74_37	-1	putative	missense	c.2908	p.G970C	0.220	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM3	HGNC	ENSG00000183090	tier1	-	-	33	0	0.00	15	10	40.00
FRG1B	0	genome.wustl.edu	37	20	29631557	29631557	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	20	29631557	29631557	A	G	SNP	FRG1B	ENST00000278882	human	ensembl	74_37	+1	known	missense	c.353	p.K118R	1.000	pfam_FRG1	pfam_FRG1,superfamily_Actin_cross-linking	-	no_errors	FRG1B	HGNC	ENSG00000149531				30	0	0.00	39	5	11.36
FRYL	0	genome.wustl.edu	37	4	48567600	48567600	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	48567600	48567600	C	T	SNP	FRYL	ENST00000358350	human	ensembl	74_37	-1	known	missense	c.3278	p.R1093K	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FRYL	HGNC	ENSG00000075539	tier1	-	-	34	0	0.00	32	4	11.11
FZD2	0	genome.wustl.edu	37	17	42636197	42636197	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	17	42636197	42636197	G	T	SNP	FZD2	ENST00000315323	human	ensembl	74_37	+1	known	missense	c.1141	p.A381S	1.000	pfam_Frizzled,pfscan_GPCR_2-like,prints_Frizzled	pfam_Frizzled,pfam_Frizzled_dom,superfamily_Frizzled_dom,smart_Frizzled_dom,pfscan_Frizzled_dom,pfscan_GPCR_2-like,prints_Frizzled	-	no_errors	FZD2	HGNC	ENSG00000180340	tier1	-	-	34	0	0.00	23	16	41.03
GFPT1	0	genome.wustl.edu	37	2	69614290	69614290	+	RNA	SNP	G	G	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	2	69614290	69614290	G	C	SNP	GFPT1	ENST00000494201	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GFPT1	HGNC	ENSG00000198380	tier1	-	-	10	0	0.00	2	10	83.33
GNA12	0	genome.wustl.edu	37	7	2854518	2854518	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	2854518	2854518	C	T	SNP	GNA12	ENST00000407904	human	ensembl	74_37	-1	putative	missense	c.47	p.G16D	0.000	NULL	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_12	-	no_errors	GNA12	HGNC	ENSG00000146535	tier1	-	-	20	0	0.00	24	5	17.24
GPR137B	0	genome.wustl.edu	37	1	236306259	236306259	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	236306259	236306259	G	A	SNP	GPR137B	ENST00000366592	human	ensembl	74_37	+1	known	missense	c.337	p.V113I	1.000	NULL	NULL	-	no_errors	GPR137B	HGNC	ENSG00000077585	tier1	-	-	23	0	0.00	21	4	16.00
GRK1	0	genome.wustl.edu	37	13	114321951	114321951	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	13	114321951	114321951	C	T	SNP	GRK1	ENST00000335678	human	ensembl	74_37	+1	known	missense	c.250	p.P84S	0.959	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RGS_dom,superfamily_Kinase-like_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Regulat_G_prot_signal_superfam,pfscan_Prot_kinase_dom,prints_GPCR_kinase	-	no_errors	GRK1	HGNC	ENSG00000185974				48	0	0.00	29	2	6.45
H2AFY	0	genome.wustl.edu	37	5	134679025	134679025	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	134679025	134679025	G	A	SNP	H2AFY	ENST00000511689	human	ensembl	74_37	-1	known	missense	c.878	p.T293I	1.000	pfam_Macro_dom,smart_Macro_dom,pirsf_Core_histone_macro-H2A,pfscan_Macro_dom	pfam_Macro_dom,pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,smart_Macro_dom,pirsf_Core_histone_macro-H2A,prints_Histone_H2A,pfscan_Macro_dom	-	no_errors	H2AFY	HGNC	ENSG00000113648	tier1	-	-	77	0	0.00	73	4	5.19
HARS	0	genome.wustl.edu	37	5	140070819	140070819	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	140070819	140070819	T	G	SNP	HARS	ENST00000504156	human	ensembl	74_37	-1	known	missense	c.71	p.Q24P	1.000	pfam_WHEP-TRS,superfamily_S15_NS1_RNA-bd,pfscan_WHEP-TRS	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_WHEP-TRS,superfamily_Anticodon-bd,superfamily_S15_NS1_RNA-bd,pirsf_HisRS/HisZ,pfscan_aa-tRNA-synth_II,pfscan_WHEP-TRS,tigrfam_His-tRNA-ligase	-	no_errors	HARS	HGNC	ENSG00000170445	tier1	-	-	47	0	0.00	31	5	13.89
HIVEP1	0	genome.wustl.edu	37	6	12130057	12130057	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	6	12130057	12130057	C	T	SNP	HIVEP1	ENST00000379388	human	ensembl	74_37	+1	known	silent	c.6141	p.N2047	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	HIVEP1	HGNC	ENSG00000095951	tier1	-	-	38	0	0.00	57	4	6.56
HNF4A	0	genome.wustl.edu	37	20	43043180	43043180	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	20	43043180	43043180	A	C	SNP	HNF4A	ENST00000316099	human	ensembl	74_37	+1	known	missense	c.526	p.I176L	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_COUP_TF,prints_Retinoid-X_rcpt/HNF4	-	no_errors	HNF4A	HGNC	ENSG00000101076				21	0	0.00	61	6	8.96
HRNR	0	genome.wustl.edu	37	1	152186614	152186614	+	Silent	SNP	C	C	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	152186614	152186614	C	G	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	silent	c.7491	p.S2497	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915	tier1	-	-	18	0	0.00	17	10	37.04
HYOU1	0	genome.wustl.edu	37	11	118918724	118918724	+	Silent	SNP	G	G	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	118918724	118918724	G	C	SNP	HYOU1	ENST00000404233	human	ensembl	74_37	-1	known	silent	c.2445	p.R815	1.000	NULL	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HYOU1	HGNC	ENSG00000149428	tier1	-	-	78	0	0.00	57	9	13.64
IFT140	0	genome.wustl.edu	37	16	1634250	1634250	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	16	1634250	1634250	C	T	SNP	IFT140	ENST00000426508	human	ensembl	74_37	-1	known	missense	c.1327	p.D443N	0.999	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	IFT140	HGNC	ENSG00000187535	tier1	-	-	29	0	0.00	13	4	23.53
IGFN1	0	genome.wustl.edu	37	1	201174426	201174426	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	201174426	201174426	G	T	SNP	IGFN1	ENST00000335211	human	ensembl	74_37	+1	known	missense	c.1133	p.G378V	1.000	smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGFN1	HGNC	ENSG00000163395				59	0	0.00	74	4	5.13
IL1RAPL1	0	genome.wustl.edu	37	X	29973625	29973625	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	X	29973625	29973625	C	T	SNP	IL1RAPL1	ENST00000302196	human	ensembl	74_37	+1	known	silent	c.1779	p.A593	0.183	NULL	pfam_TIR_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_TIR_dom,smart_Ig_sub,smart_Ig_sub2,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom	-	no_errors	IL1RAPL1	HGNC	ENSG00000169306	tier1	-	-	40	0	0.00	19	47	71.21
IL36B	0	genome.wustl.edu	37	2	113785502	113785502	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	2	113785502	113785502	A	G	SNP	IL36B	ENST00000327407	human	ensembl	74_37	-1	known	missense	c.452	p.F151S	0.012	pfam_IL-1,superfamily_Cytokine_IL1-like,smart_IL-1	pfam_IL-1,superfamily_Cytokine_IL1-like,smart_IL-1,prints_IL-1,prints_IL-1_alpha/beta,prints_IL-1_beta	-	no_errors	IL36B	HGNC	ENSG00000136696	tier1	-	-	69	0	0.00	68	4	5.56
ILF3	0	genome.wustl.edu	37	19	10790493	10790493	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	19	10790493	10790493	C	T	SNP	ILF3	ENST00000449870	human	ensembl	74_37	+1	known	missense	c.749	p.P250L	1.000	pfam_DZF,smart_DZF	pfam_DZF,pfam_dsRNA-bd_dom,smart_DZF,smart_dsRNA-bd_dom,pfscan_dsRNA-bd_dom	-	no_errors	ILF3	HGNC	ENSG00000129351	tier1	-	-	47	0	0.00	35	4	10.26
INTS4	0	genome.wustl.edu	37	11	77702183	77702183	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	77702183	77702183	C	T	SNP	INTS4	ENST00000534064	human	ensembl	74_37	-1	known	missense	c.217	p.V73I	0.998	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	INTS4	HGNC	ENSG00000149262	tier1	-	-	76	0	0.00	53	35	39.77
IPP	0	genome.wustl.edu	37	1	46184897	46184898	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	46184897	46184898	AC	-	DEL	IPP	ENST00000396478	human	ensembl	74_37	-1	known	frame_shift_del	c.1164_1163	p.C388fs	1.000:1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	IPP	HGNC	ENSG00000197429	tier1			27	0	0.00	28	4	12.50
IREB2	0	genome.wustl.edu	37	15	78732161	78732161	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	15	78732161	78732161	A	G	SNP	IREB2	ENST00000258886	human	ensembl	74_37	+1	known	missense	c.44	p.E15G	1.000	superfamily_Acoase/IPM_deHydtase_lsu_aba	pfam_Acoase/IPM_deHydtase_lsu_aba,pfam_AconitaseA/IPMdHydase_ssu_swvl,superfamily_Acoase/IPM_deHydtase_lsu_aba,superfamily_Aconitase/3IPM_dehydase_swvl,prints_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	-	no_errors	IREB2	HGNC	ENSG00000136381	tier1	-	-	59	0	0.00	27	20	42.55
ITGA11	0	genome.wustl.edu	37	15	68649617	68649617	+	Silent	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	15	68649617	68649617	G	T	SNP	ITGA11	ENST00000315757	human	ensembl	74_37	-1	known	silent	c.621	p.G207	0.916	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA11	HGNC	ENSG00000137809				92	0	0.00	50	3	5.66
JAG2	0	genome.wustl.edu	37	14	105617246	105617246	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	14	105617246	105617246	C	T	SNP	JAG2	ENST00000331782	human	ensembl	74_37	-1	known	missense	c.1384	p.V462I	0.132	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Notch_ligand_N,pfam_DSL,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,smart_DSL,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWC_out,smart_VWF_C,pfscan_DSL,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	JAG2	HGNC	ENSG00000184916	tier1	-	-	40	0	0.00	18	25	58.14
JMJD1C	0	genome.wustl.edu	37	10	64968032	64968032	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	10	64968032	64968032	G	C	SNP	JMJD1C	ENST00000399262	human	ensembl	74_37	-1	known	missense	c.3397	p.P1133A	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD1C	HGNC	ENSG00000171988	tier1	-	-	26	0	0.00	12	22	64.71
KALRN	0	genome.wustl.edu	37	3	124398488	124398488	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	3	124398488	124398488	G	A	SNP	KALRN	ENST00000462213	human	ensembl	74_37	+1	putative	missense	c.352	p.G118S	0.290	NULL	NULL	-	no_errors	KALRN	HGNC	ENSG00000160145	tier1	-	-	58	0	0.00	41	11	21.15
KAT6B	0	genome.wustl.edu	37	10	76602862	76602862	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	10	76602862	76602862	G	T	SNP	KAT6B	ENST00000287239	human	ensembl	74_37	+1	known	missense	c.247	p.V83F	0.999	NULL	pfam_MOZ_SAS,pfam_Znf_PHD-finger,pfam_Histone_H1/H5_H15,superfamily_Acyl_CoA_acyltransferase,superfamily_Znf_FYVE_PHD,smart_Histone_H1/H5_H15,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	KAT6B	HGNC	ENSG00000156650	tier1	-	-	64	0	0.00	33	4	10.81
KAT7	0	genome.wustl.edu	37	17	47905057	47905057	+	RNA	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	17	47905057	47905057	G	A	SNP	KAT7	ENST00000503101	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	KAT7	HGNC	ENSG00000136504	tier1	-	-	53	0	0.00	74	4	5.13
KBTBD12	0	genome.wustl.edu	37	3	127642564	127642564	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	3	127642564	127642564	C	T	SNP	KBTBD12	ENST00000405109	human	ensembl	74_37	+1	known	silent	c.660	p.V220	0.915	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KBTBD12	HGNC	ENSG00000187715	tier1	-	-	39	0	0.00	20	5	20.00
KCNJ12	0	genome.wustl.edu	37	17	21318691	21318691	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	17	21318691	21318691	G	A	SNP	KCNJ12	ENST00000331718	human	ensembl	74_37	+1	known	missense	c.37	p.V13M	1.000	pfam_K_chnl_inward-rec_Kir_N	pfam_K_chnl_inward-rec_Kir,pfam_K_chnl_inward-rec_Kir_N,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir2.2	-	no_errors	KCNJ12	HGNC	ENSG00000184185	tier1	-	-	94	0	0.00	89	6	6.32
KCNN3	0	genome.wustl.edu	37	1	154680162	154680162	+	RNA	SNP	G	G	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	154680162	154680162	G	C	SNP	KCNN3	ENST00000515643	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	KCNN3	HGNC	ENSG00000143603	tier1	-	-	76	0	0.00	62	38	38.00
KDM5A	0	genome.wustl.edu	37	12	404831	404831	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	12	404831	404831	G	T	SNP	KDM5A	ENST00000399788	human	ensembl	74_37	-1	known	missense	c.4363	p.L1455M	1.000	NULL	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5A	HGNC	ENSG00000073614	tier1	-	-	71	0	0.00	62	4	6.06
KIF3B	0	genome.wustl.edu	37	20	30898258	30898258	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	20	30898258	30898258	C	T	SNP	KIF3B	ENST00000375712	human	ensembl	74_37	+1	known	silent	c.678	p.S226	0.988	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF3B	HGNC	ENSG00000101350	tier1	-	-	24	0	0.00	36	17	32.08
KIR2DL3	0	genome.wustl.edu	37	19	55258792	55258792	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	19	55258792	55258792	C	T	SNP	KIR2DL3	ENST00000342376	human	ensembl	74_37	+1	known	missense	c.670	p.P224S	0.070	NULL	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR2DL3	HGNC	ENSG00000243772	tier1	rs72487164	-	197	0	0.00	95	73	43.20
KIR3DX1	0	genome.wustl.edu	37	19	55048317	55048317	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	19	55048317	55048317	G	T	SNP	KIR3DX1	ENST00000335056	human	ensembl	74_37	+1	known	missense	c.884	p.C295F	0.804	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	KIR3DX1	HGNC	ENSG00000104970	tier1	-	-	59	0	0.00	65	5	7.14
KMT2E	0	genome.wustl.edu	37	7	104753227	104753227	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	104753227	104753227	A	G	SNP	KMT2E	ENST00000257745	human	ensembl	74_37	+1	known	missense	c.5024	p.H1675R	0.994	NULL	pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_PHD-finger	-	no_errors	KMT2E	HGNC	ENSG00000005483	tier1	-	-	76	0	0.00	61	21	25.61
KMT2E	0	genome.wustl.edu	37	7	104753228	104753228	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	104753228	104753228	C	A	SNP	KMT2E	ENST00000257745	human	ensembl	74_37	+1	known	missense	c.5025	p.H1675Q	0.989	NULL	pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_PHD-finger	-	no_errors	KMT2E	HGNC	ENSG00000005483	tier1	-	-	77	0	0.00	61	21	25.61
KRT34	0	genome.wustl.edu	37	17	39535268	39535268	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	17	39535268	39535268	C	T	SNP	KRT34	ENST00000394001	human	ensembl	74_37	-1	known	missense	c.1163	p.R388H	0.979	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_I	-	no_errors	KRT34	HGNC	ENSG00000131737	tier1	-	-	104	0	0.00	57	51	47.22
LENG8	0	genome.wustl.edu	37	19	54969281	54969281	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	19	54969281	54969281	G	T	SNP	LENG8	ENST00000326764	human	ensembl	74_37	+1	known	splice_site	c.1903-1	e13-1	1.000	-	-	-	no_errors	LENG8	HGNC	ENSG00000167615				22	0	0.00	23	2	8.00
LINC00052	0	genome.wustl.edu	37	15	88121427	88121428	+	RNA	DEL	CT	CT	-			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	15	88121427	88121428	CT	-	DEL	LINC00052	ENST00000560153	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	LINC00052	HGNC	ENSG00000259527	tier1			42	0	0.00	26	3	10.34
LIPF	0	genome.wustl.edu	37	10	90438384	90438384	+	Silent	SNP	C	C	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	10	90438384	90438384	C	G	SNP	LIPF	ENST00000394375	human	ensembl	74_37	+1	known	silent	c.1173	p.A391	0.537	pfam_AB_hydrolase_1	pfam_AB_hydrolase_lipase,pfam_AB_hydrolase_1	-	no_errors	LIPF	HGNC	ENSG00000182333				86	0	0.00	64	4	5.88
LMOD2	0	genome.wustl.edu	37	7	123302462	123302462	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	123302462	123302462	C	T	SNP	LMOD2	ENST00000458573	human	ensembl	74_37	+1	known	silent	c.822	p.N274	0.966	NULL	pfam_Tropomodulin,pfscan_WH2_dom	-	no_errors	LMOD2	HGNC	ENSG00000170807	tier1	-	-	58	0	0.00	33	18	35.29
LOC100996870	0	genome.wustl.edu	37	9	66466233	66466233	+	RNA	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	9	66466233	66466233	C	A	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113	tier1	rs12552537	-	12	0	0.00	9	4	30.77
LOC101930218	0	genome.wustl.edu	37	19	199283	199283	+	RNA	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	19	199283	199283	G	A	SNP	LOC101930218	ENST00000607682	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.967	-	-	-	no_errors	AC092299.8	Clone_based_vega_gene	ENSG00000272098				8	0	0.00	2	2	50.00
LOC285556	0	genome.wustl.edu	37	4	100571762	100571762	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	100571762	100571762	G	A	SNP	LOC285556	ENST00000511828	human	ensembl	74_37	-1	putative	silent	c.4044	p.S1348	0.005	NULL	NULL	-	no_errors	RP11-766F14.2	Clone_based_vega_gene	ENSG00000248713	tier1	-	-	44	0	0.00	32	15	31.91
LOC339788	0	genome.wustl.edu	37	2	8064273	8064273	+	RNA	SNP	T	T	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	2	8064273	8064273	T	C	SNP	LOC339788	ENST00000426969	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	AC007464.1	Clone_based_vega_gene	ENSG00000235665	tier1	-	-	35	0	0.00	10	30	75.00
LRP1B	0	genome.wustl.edu	37	2	141819736	141819736	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	2	141819736	141819736	C	A	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.1120	p.A374S	1.000	superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	61	0	0.00	49	8	14.04
LRRC36	0	genome.wustl.edu	37	16	67380182	67380182	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	16	67380182	67380182	C	A	SNP	LRRC36	ENST00000570075	human	ensembl	74_37	+1	known	missense	c.94	p.P32T	1.000	NULL	NULL	-	no_errors	LRRC36	HGNC	ENSG00000159708	tier1	-	-	81	0	0.00	71	4	5.33
LRRIQ1	0	genome.wustl.edu	37	12	85466844	85466844	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	12	85466844	85466844	G	T	SNP	LRRIQ1	ENST00000393217	human	ensembl	74_37	+1	known	missense	c.2855	p.C952F	0.000	NULL	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,smart_Leu-rich_rpt_typical-subtyp,pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ1	HGNC	ENSG00000133640	tier1	-	-	67	0	0.00	41	40	49.38
LRRN3	0	genome.wustl.edu	37	7	110763330	110763330	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	110763330	110763330	C	T	SNP	LRRN3	ENST00000308478	human	ensembl	74_37	+1	known	nonsense	c.502	p.R168*	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRRN3	HGNC	ENSG00000173114				29	0	0.00	29	2	6.45
MAP2K4P1	0	genome.wustl.edu	37	X	72745083	72745083	+	RNA	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	X	72745083	72745083	G	T	SNP	MAP2K4P1	ENST00000602584	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	MAP2K4P1	HGNC	ENSG00000269904	tier1	-	-	22	0	0.00	4	15	78.95
MARCH4	0	genome.wustl.edu	37	2	217124265	217124265	+	Silent	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	2	217124265	217124265	G	T	SNP	MARCH4	ENST00000273067	human	ensembl	74_37	-1	known	silent	c.1003	p.R335	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH4	HGNC	ENSG00000144583	tier1	-	-	65	0	0.00	42	29	40.85
MARCH6	0	genome.wustl.edu	37	5	10411602	10411602	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	10411602	10411602	C	T	SNP	MARCH6	ENST00000274140	human	ensembl	74_37	+1	known	missense	c.1849	p.P617S	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH6	HGNC	ENSG00000145495				55	0	0.00	38	4	9.52
MCPH1	0	genome.wustl.edu	37	8	6289099	6289099	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	8	6289099	6289099	A	-	DEL	MCPH1	ENST00000344683	human	ensembl	74_37	+1	known	frame_shift_del	c.313	p.K107fs	0.022	NULL	pfam_Microcephalin,pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom,prints_BRCA1	-	no_errors	MCPH1	HGNC	ENSG00000147316	tier1			24	0	0.00	20	3	13.04
MDGA1	0	genome.wustl.edu	37	6	37622643	37622643	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	6	37622643	37622643	C	T	SNP	MDGA1	ENST00000297153	human	ensembl	74_37	-1	known	silent	c.645	p.Q215	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA1	HGNC	ENSG00000112139	tier1	-	-	61	0	0.00	34	19	35.85
METRNL	0	genome.wustl.edu	37	17	81052284	81052284	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	17	81052284	81052284	G	A	SNP	METRNL	ENST00000320095	human	ensembl	74_37	+1	known	silent	c.900	p.E300	0.011	NULL	NULL	-	no_errors	METRNL	HGNC	ENSG00000176845	tier1	-	-	133	0	0.00	97	56	36.60
METTL7B	0	genome.wustl.edu	37	12	56075629	56075629	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	12	56075629	56075629	C	A	SNP	METTL7B	ENST00000394252	human	ensembl	74_37	+1	known	missense	c.91	p.L31M	0.002	NULL	pfam_Methyltransf_11,pfam_Methyltransf_12,pfam_UbiE/COQ5_MeTrFase,pfam_Methyltransferase-rel	-	no_errors	METTL7B	HGNC	ENSG00000170439				22	0	0.00	31	4	11.43
MFAP1	0	genome.wustl.edu	37	15	44107236	44107236	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	15	44107236	44107236	C	T	SNP	MFAP1	ENST00000267812	human	ensembl	74_37	-1	known	silent	c.336	p.V112	0.793	NULL	pfam_MFAP1_C	-	no_errors	MFAP1	HGNC	ENSG00000140259	tier1	-	-	48	0	0.00	24	11	31.43
MICA	0	genome.wustl.edu	37	6	31378347	31378347	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	6	31378347	31378347	C	T	SNP	MICA	ENST00000449934	human	ensembl	74_37	+1	known	missense	c.98	p.T33M	0.000	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_MHC_I_a_a1/a2,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	MICA	HGNC	ENSG00000204520				57	0	0.00	62	4	6.06
MIR4329	0	genome.wustl.edu	37	X	112023977	112023978	+	RNA	INS	-	-	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	X	112023977	112023978	-	A	INS	MIR4329	ENST00000582643	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.002	-	-	-	no_errors	MIR4329	HGNC	ENSG00000263351	tier1			34	0	0.00	45	5	10.00
MORC2-AS1	0	genome.wustl.edu	37	22	31318335	31318335	+	RNA	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	22	31318335	31318335	G	A	SNP	MORC2-AS1	ENST00000422995	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	MORC2-AS1	HGNC	ENSG00000235989	tier1	-	-	27	0	0.00	12	18	60.00
MROH9	0	genome.wustl.edu	37	1	170934323	170934323	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	170934323	170934323	C	A	SNP	MROH9	ENST00000367759	human	ensembl	74_37	+1	known	nonsense	c.407	p.S136*	0.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH9	HGNC	ENSG00000117501				41	0	0.00	34	2	5.56
MTHFD1L	0	genome.wustl.edu	37	6	151336054	151336054	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	6	151336054	151336054	G	T	SNP	MTHFD1L	ENST00000367321	human	ensembl	74_37	+1	known	missense	c.2346	p.Q782H	1.000	pfam_Formate_THF_ligase,superfamily_P-loop_NTPase	pfam_Formate_THF_ligase,pfam_THF_DH/CycHdrlase_NAD-bd_dom,pfam_THF_DH/CycHdrlase_cat_dom,superfamily_P-loop_NTPase,prints_THF_DH/CycHdrlase	-	no_errors	MTHFD1L	HGNC	ENSG00000120254				57	0	0.00	64	4	5.88
MUC12	0	genome.wustl.edu	37	7	100640747	100640747	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	100640747	100640747	C	T	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	silent	c.6903	p.P2301	0.000	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	58	0	0.00	35	16	31.37
MUC16	0	genome.wustl.edu	37	19	9070725	9070725	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	19	9070725	9070725	G	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.16721	p.A5574D	0.001	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				65	0	0.00	47	3	6.00
MUC17	0	genome.wustl.edu	37	7	100676491	100676491	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	100676491	100676491	C	G	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	missense	c.1794	p.N598K	0.007	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876	tier1	-	-	119	0	0.00	76	29	27.62
MUC5B	0	genome.wustl.edu	37	11	1247459	1247459	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	1247459	1247459	G	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.152	p.R51Q	0.001	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	202	0	0.00	119	61	33.89
MYB	0	genome.wustl.edu	37	6	135518458	135518458	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	6	135518458	135518458	G	A	SNP	MYB	ENST00000341911	human	ensembl	74_37	+1	known	silent	c.1563	p.S521	1.000	pfam_C-myb_C	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYB	HGNC	ENSG00000118513				34	0	0.00	37	2	5.13
MYBPC3	0	genome.wustl.edu	37	11	47353666	47353666	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	47353666	47353666	G	A	SNP	MYBPC3	ENST00000399249	human	ensembl	74_37	-1	known	silent	c.3771	p.N1257	0.711	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYBPC3	HGNC	ENSG00000134571	tier1	-	-	22	0	0.00	21	6	22.22
MYH6	0	genome.wustl.edu	37	14	23863421	23863421	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	14	23863421	23863421	C	T	SNP	MYH6	ENST00000356287	human	ensembl	74_37	-1	known	silent	c.2541	p.T847	0.002	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH6	HGNC	ENSG00000197616	tier1	-	-	48	0	0.00	35	24	40.68
MYH8	0	genome.wustl.edu	37	17	10304048	10304048	+	Silent	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	17	10304048	10304048	G	T	SNP	MYH8	ENST00000403437	human	ensembl	74_37	-1	known	silent	c.3394	p.R1132	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH8	HGNC	ENSG00000133020	tier1	-	-	63	0	0.00	24	34	58.62
MZB1	0	genome.wustl.edu	37	5	138725510	138725512	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	138725510	138725512	CAG	-	DEL	MZB1	ENST00000503481	human	ensembl	74_37	-1	known	in_frame_del	c.36_34	p.L12in_frame_del	0.366:0.352:0.265	NULL	NULL	-	no_errors	MZB1	HGNC	ENSG00000170476	tier1			39	0	0.00	31	3	8.82
NAPEPLD	0	genome.wustl.edu	37	7	102760610	102760610	+	Nonsense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	102760610	102760610	C	A	SNP	NAPEPLD	ENST00000455523	human	ensembl	74_37	-1	known	nonsense	c.574	p.G192*	0.987	NULL	NULL	-	no_errors	NAPEPLD	HGNC	ENSG00000161048				38	0	0.00	32	2	5.88
NAV2	0	genome.wustl.edu	37	11	20099124	20099124	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	20099124	20099124	G	T	SNP	NAV2	ENST00000396087	human	ensembl	74_37	+1	known	missense	c.5178	p.Q1726H	1.000	NULL	pfam_CH-domain,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV2	HGNC	ENSG00000166833	tier1	-	-	74	0	0.00	59	4	6.25
NCAM2	0	genome.wustl.edu	37	21	22707830	22707830	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	21	22707830	22707830	G	A	SNP	NCAM2	ENST00000400546	human	ensembl	74_37	+1	known	missense	c.743	p.G248D	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom,prints_Neural_cell_adh	-	no_errors	NCAM2	HGNC	ENSG00000154654	tier1	-	-	51	0	0.00	45	4	8.16
NCAPD3	0	genome.wustl.edu	37	11	134074826	134074826	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	134074826	134074826	C	T	SNP	NCAPD3	ENST00000534548	human	ensembl	74_37	-1	known	missense	c.1057	p.V353I	0.965	superfamily_ARM-type_fold,pirsf_NCAPD3	superfamily_ARM-type_fold,pirsf_NCAPD3	-	no_errors	NCAPD3	HGNC	ENSG00000151503	tier1	-	-	28	0	0.00	23	3	11.54
NEB	0	genome.wustl.edu	37	2	152534587	152534587	+	Silent	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	2	152534587	152534587	G	T	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	silent	c.3370	p.R1124	0.734	pfam_Nebulin_35r-motif,superfamily_Adhesion_dom,smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				40	0	0.00	43	3	6.52
NEK11	0	genome.wustl.edu	37	3	130992369	130992369	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	3	130992369	130992369	C	G	SNP	NEK11	ENST00000383366	human	ensembl	74_37	+1	known	missense	c.1669	p.P557A	0.001	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK11	HGNC	ENSG00000114670	tier1	-	-	89	0	0.00	43	19	30.65
NES	0	genome.wustl.edu	37	1	156640094	156640094	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	156640094	156640094	G	T	SNP	NES	ENST00000368223	human	ensembl	74_37	-1	known	missense	c.3886	p.P1296T	0.010	NULL	pfam_IF	-	no_errors	NES	HGNC	ENSG00000132688	tier1	-	-	52	0	0.00	22	54	71.05
NPHS1	0	genome.wustl.edu	37	19	36332627	36332627	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	19	36332627	36332627	A	-	DEL	NPHS1	ENST00000378910	human	ensembl	74_37	-1	known	frame_shift_del	c.2805	p.V936fs	1.000	superfamily_Fibronectin_type3,smart_Ig_sub,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NPHS1	HGNC	ENSG00000161270	tier1			45	0	0.00	70	10	12.50
NTRK1	0	genome.wustl.edu	37	1	156849819	156849819	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	156849819	156849819	G	A	SNP	NTRK1	ENST00000524377	human	ensembl	74_37	+1	known	missense	c.2075	p.R692H	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Cys-rich_flank_reg_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_Tyr_kinase_neurotrophic_rcpt_1,prints_Tyr_kinase_NGF_rcpt	-	no_errors	NTRK1	HGNC	ENSG00000198400	tier1	-	-	60	0	0.00	15	37	71.15
OR1Q1	0	genome.wustl.edu	37	9	125377488	125377488	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	9	125377488	125377488	C	A	SNP	OR1Q1	ENST00000297913	human	ensembl	74_37	+1	known	missense	c.472	p.L158M	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1Q1	HGNC	ENSG00000165202				29	0	0.00	27	4	12.90
OR2S2	0	genome.wustl.edu	37	9	35957427	35957427	+	Silent	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	9	35957427	35957427	G	T	SNP	OR2S2	ENST00000341959	human	ensembl	74_37	-1	known	silent	c.669	p.I223	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2S2	HGNC	ENSG00000122718				26	0	0.00	27	2	6.90
OR2T2	0	genome.wustl.edu	37	1	248616764	248616764	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	248616764	248616764	C	T	SNP	OR2T2	ENST00000342927	human	ensembl	74_37	+1	known	silent	c.666	p.I222	0.001	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T2	HGNC	ENSG00000196240	tier1	-	-	23	0	0.00	11	3	21.43
OR2T3	0	genome.wustl.edu	37	1	248637563	248637563	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	248637563	248637563	G	T	SNP	OR2T3	ENST00000359594	human	ensembl	74_37	+1	known	missense	c.912	p.R304S	0.003	pfam_7TM_GPCR_olfarory/Srsx	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T3	HGNC	ENSG00000196539	tier1	-	-	255	0	0.00	164	91	35.55
OR4A16	0	genome.wustl.edu	37	11	55110804	55110804	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	55110804	55110804	T	C	SNP	OR4A16	ENST00000314721	human	ensembl	74_37	+1	known	missense	c.128	p.I43T	0.248	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A16	HGNC	ENSG00000181961				56	0	0.00	54	3	5.26
OR4P4	0	genome.wustl.edu	37	11	55406658	55406658	+	Silent	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	55406658	55406658	C	A	SNP	OR4P4	ENST00000314612	human	ensembl	74_37	+1	known	silent	c.825	p.I275	0.009	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4P4	HGNC	ENSG00000181927	tier1	-	-	37	0	0.00	32	11	25.58
OR56A3	0	genome.wustl.edu	37	11	5969255	5969255	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	5969255	5969255	C	T	SNP	OR56A3	ENST00000329564	human	ensembl	74_37	+1	known	nonsense	c.679	p.R227*	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR56A3	HGNC	ENSG00000184478				45	0	0.00	35	2	5.41
PALM2-AKAP2	0	genome.wustl.edu	37	9	112694236	112694236	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	9	112694236	112694236	C	T	SNP	PALM2-AKAP2	ENST00000374530	human	ensembl	74_37	+1	known	missense	c.424	p.P142S	1.000	NULL	pfam_Paralemmin,pfam_RII_binding_1	-	no_errors	PALM2-AKAP2	HGNC	ENSG00000157654	tier1	-	-	38	0	0.00	15	17	53.12
PAPD7	0	genome.wustl.edu	37	5	6755013	6755014	+	Frame_Shift_Del	DEL	AC	AC	-			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	6755013	6755014	AC	-	DEL	PAPD7	ENST00000230859	human	ensembl	74_37	+1	known	frame_shift_del	c.1584_1585	p.T532fs	1.000:1.000	NULL	pfam_PAP_assoc,pfam_Nucleotidyltransferase	-	no_errors	PAPD7	HGNC	ENSG00000112941	tier1			37	0	0.00	24	2	7.69
PCDH18	0	genome.wustl.edu	37	4	138451019	138451019	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	138451019	138451019	T	A	SNP	PCDH18	ENST00000344876	human	ensembl	74_37	-1	known	missense	c.2224	p.T742S	0.994	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH18	HGNC	ENSG00000189184	tier1	-	-	45	0	0.00	24	8	25.00
PCDHB3	0	genome.wustl.edu	37	5	140482041	140482041	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	140482041	140482041	C	T	SNP	PCDHB3	ENST00000231130	human	ensembl	74_37	+1	known	missense	c.1808	p.S603L	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB3	HGNC	ENSG00000113205	tier1	-	-	192	0	0.00	88	116	56.59
PCDHB8	0	genome.wustl.edu	37	5	140558872	140558872	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	140558872	140558872	C	T	SNP	PCDHB8	ENST00000239444	human	ensembl	74_37	+1	known	silent	c.1257	p.N419	0.060	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB8	HGNC	ENSG00000120322	tier1	-	-	366	0	0.00	271	69	20.23
PDLIM5	0	genome.wustl.edu	37	4	95578595	95578595	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	95578595	95578595	G	A	SNP	PDLIM5	ENST00000317968	human	ensembl	74_37	+1	known	silent	c.1482	p.L494	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	PDLIM5	HGNC	ENSG00000163110	tier1	-	-	64	0	0.00	31	19	38.00
PGLYRP2	0	genome.wustl.edu	37	19	15580205	15580205	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	19	15580205	15580205	G	T	SNP	PGLYRP2	ENST00000292609	human	ensembl	74_37	-1	known	missense	c.1879	p.P627T	0.001	NULL	pfam_Amidase_domain,superfamily_Amidase_domain,smart_PGRP_domain_met/bac,smart_Amidase_domain	-	no_errors	PGLYRP2	HGNC	ENSG00000161031	tier1	-	-	92	0	0.00	70	4	5.41
PHF16	0	genome.wustl.edu	37	X	46887436	46887436	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	X	46887436	46887436	C	T	SNP	PHF16	ENST00000218343	human	ensembl	74_37	+1	known	silent	c.618	p.C206	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Enhancer_polycomb-like_N,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF16	HGNC	ENSG00000102221				55	0	0.00	46	3	6.12
PHF8	0	genome.wustl.edu	37	X	54069146	54069146	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	X	54069146	54069146	C	T	SNP	PHF8	ENST00000357988	human	ensembl	74_37	-1	known	missense	c.124	p.V42M	0.997	superfamily_Znf_FYVE_PHD,pfscan_Znf_PHD-finger	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF8	HGNC	ENSG00000172943	tier1	-	-	37	0	0.00	75	4	5.06
PID1	0	genome.wustl.edu	37	2	229890700	229890700	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	2	229890700	229890700	G	A	SNP	PID1	ENST00000354069	human	ensembl	74_37	-1	known	missense	c.401	p.A134V	1.000	smart_PTB/PI_dom	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	PID1	HGNC	ENSG00000153823	tier1	-	-	63	0	0.00	61	4	6.15
PIK3CG	0	genome.wustl.edu	37	7	106509583	106509583	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	106509583	106509583	C	T	SNP	PIK3CG	ENST00000359195	human	ensembl	74_37	+1	known	missense	c.1577	p.P526L	1.000	superfamily_ARM-type_fold	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CG	HGNC	ENSG00000105851	tier1	-	-	37	0	0.00	33	9	21.43
PLAC8	0	genome.wustl.edu	37	4	84026109	84026109	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	84026109	84026109	G	C	SNP	PLAC8	ENST00000311507	human	ensembl	74_37	-1	known	missense	c.183	p.C61W	1.000	pfam_Uncharacterised_Cys-rich,tigrfam_Uncharacterised_Cys-rich	pfam_Uncharacterised_Cys-rich,tigrfam_Uncharacterised_Cys-rich	-	no_errors	PLAC8	HGNC	ENSG00000145287				48	0	0.00	46	3	6.12
PLAGL1	0	genome.wustl.edu	37	6	144263369	144263369	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	6	144263369	144263369	C	T	SNP	PLAGL1	ENST00000354765	human	ensembl	74_37	-1	known	missense	c.584	p.R195H	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PLAGL1	HGNC	ENSG00000118495				44	0	0.00	33	2	5.71
PLCB2	0	genome.wustl.edu	37	15	40594185	40594185	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	15	40594185	40594185	G	A	SNP	PLCB2	ENST00000260402	human	ensembl	74_37	-1	known	silent	c.555	p.L185	0.988	pirsf_PLC-beta	pirsf_PLC-beta,pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLC-beta_C,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,prints_Pinositol_PLipase_C,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y	-	no_errors	PLCB2	HGNC	ENSG00000137841	tier1	-	-	59	0	0.00	26	11	29.73
PLXNA1	0	genome.wustl.edu	37	3	126749110	126749110	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	3	126749110	126749110	G	A	SNP	PLXNA1	ENST00000393409	human	ensembl	74_37	+1	known	missense	c.5086	p.D1696N	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA1	HGNC	ENSG00000114554	tier1	-	-	40	0	0.00	13	6	31.58
PMCHL1	0	genome.wustl.edu	37	5	22142664	22142664	+	RNA	SNP	A	A	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	22142664	22142664	A	C	SNP	PMCHL1	ENST00000418902	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.984	-	-	-	no_errors	PMCHL1	HGNC	ENSG00000168967	tier1	-	-	62	0	0.00	61	21	25.61
PNPLA5	0	genome.wustl.edu	37	22	44285693	44285694	+	Frame_Shift_Ins	INS	-	-	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	22	44285693	44285694	-	T	INS	PNPLA5	ENST00000216177	human	ensembl	74_37	-1	known	frame_shift_ins	c.478_477	p.E159fs	0.000:0.000	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	-	no_errors	PNPLA5	HGNC	ENSG00000100341	tier1			33	0	0.00	15	2	11.76
PRDM15	0	genome.wustl.edu	37	21	43256297	43256297	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	21	43256297	43256297	G	T	SNP	PRDM15	ENST00000269844	human	ensembl	74_37	-1	known	nonsense	c.2301	p.C767*	0.896	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM15	HGNC	ENSG00000141956	tier1	-	-	39	0	0.00	34	9	20.93
PREX2	0	genome.wustl.edu	37	8	69021848	69021848	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	8	69021848	69021848	C	G	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	missense	c.3136	p.Q1046E	1.000	NULL	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889	tier1	-	-	30	0	0.00	14	12	46.15
PRKAB1	0	genome.wustl.edu	37	12	120110200	120110200	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	12	120110200	120110200	C	T	SNP	PRKAB1	ENST00000229328	human	ensembl	74_37	+1	known	missense	c.254	p.T85M	1.000	superfamily_Ig_E-set	pfam_AMP_prot_kin_bsu_interact-dom,superfamily_Ig_E-set	-	no_errors	PRKAB1	HGNC	ENSG00000111725	tier1	-	-	50	0	0.00	55	5	8.33
PRSS12	0	genome.wustl.edu	37	4	119229726	119229726	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	119229726	119229726	G	T	SNP	PRSS12	ENST00000296498	human	ensembl	74_37	-1	known	missense	c.1496	p.P499H	1.000	superfamily_Srcr_rcpt-rel	pfam_SRCR,pfam_Peptidase_S1,pfam_Kringle,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_Kringle-like,smart_Kringle,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_Kringle,pfscan_SRCR,pfscan_Peptidase_S1,prints_SRCR,prints_Peptidase_S1A	-	no_errors	PRSS12	HGNC	ENSG00000164099	tier1	-	-	71	0	0.00	57	4	6.56
PRSS3	0	genome.wustl.edu	37	9	33794840	33794840	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	9	33794840	33794840	G	A	SNP	PRSS3	ENST00000342836	human	ensembl	74_37	+1	known	silent	c.51	p.A17	0.000	NULL	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS3	HGNC	ENSG00000010438	tier1	rs10117993	-	45	0	0.00	54	5	8.47
PTPRJ	0	genome.wustl.edu	37	11	48152120	48152120	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	48152120	48152120	G	T	SNP	PTPRJ	ENST00000418331	human	ensembl	74_37	+1	known	missense	c.1467	p.E489D	0.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRJ	HGNC	ENSG00000149177				44	0	0.00	38	2	5.00
PTPRK	0	genome.wustl.edu	37	6	128383358	128383359	+	RNA	INS	-	-	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	6	128383358	128383359	-	T	INS	PTPRK	ENST00000434424	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.033:0.036	-	-	-	no_errors	PTPRK	HGNC	ENSG00000152894	tier1			17	0	0.00	18	3	14.29
PTPRN2	0	genome.wustl.edu	37	7	157387999	157387999	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	157387999	157387999	G	A	SNP	PTPRN2	ENST00000404321	human	ensembl	74_37	-1	known	silent	c.2496	p.H832	0.900	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Receptor_IA-2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRN2	HGNC	ENSG00000155093	tier1	rs140246794	-	43	0	0.00	38	20	34.48
PTX4	0	genome.wustl.edu	37	16	1537710	1537710	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	16	1537710	1537710	G	T	SNP	PTX4	ENST00000447419	human	ensembl	74_37	-1	known	missense	c.403	p.Q135K	0.022	NULL	pfam_Pentaxin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	PTX4	HGNC	ENSG00000251692	tier1	-	-	78	0	0.00	64	4	5.88
PZP	0	genome.wustl.edu	37	12	9305470	9305470	+	Silent	SNP	A	A	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	12	9305470	9305470	A	C	SNP	PZP	ENST00000261336	human	ensembl	74_37	-1	known	silent	c.4071	p.T1357	0.876	superfamily_A-macroglobulin_rcpt-bd	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_SV_autoAg,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	PZP	HGNC	ENSG00000126838	tier1	-	-	64	0	0.00	39	13	25.00
RASSF6	0	genome.wustl.edu	37	4	74459299	74459299	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	74459299	74459299	G	A	SNP	RASSF6	ENST00000342081	human	ensembl	74_37	-1	known	silent	c.252	p.G84	0.013	NULL	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SARAH_dom	-	no_errors	RASSF6	HGNC	ENSG00000169435	tier1	rs141793183	-	81	0	0.00	71	8	10.13
RB1	0	genome.wustl.edu	37	13	49039405	49039406	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	13	49039405	49039406	-	A	INS	RB1	ENST00000267163	human	ensembl	74_37	+1	known	frame_shift_ins	c.2390_2391	p.R798fs	1.000:0.992	pfam_RB_C	pfam_RB_C,pfam_RB_A,pfam_RB_B,pfam_RB_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	RB1	HGNC	ENSG00000139687	tier1			60	0	0.00	24	35	59.32
RBMS2	0	genome.wustl.edu	37	12	56974967	56974967	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	12	56974967	56974967	G	T	SNP	RBMS2	ENST00000262031	human	ensembl	74_37	+1	known	splice_site	c.543-1	e6-1	1.000	-	-	-	no_errors	RBMS2	HGNC	ENSG00000076067	tier1	-	-	46	0	0.00	57	4	6.56
RDH10	0	genome.wustl.edu	37	8	74231402	74231402	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	8	74231402	74231402	G	T	SNP	RDH10	ENST00000240285	human	ensembl	74_37	+1	known	missense	c.597	p.L199F	1.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	RDH10	HGNC	ENSG00000121039	tier1	-	-	90	0	0.00	54	35	39.33
RGS2	0	genome.wustl.edu	37	1	192779527	192779527	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	192779527	192779527	G	T	SNP	RGS2	ENST00000235382	human	ensembl	74_37	+1	known	missense	c.240	p.W80C	1.000	superfamily_Regulat_G_prot_signal_superfam,prints_RGS_dom	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS2	HGNC	ENSG00000116741	tier1	-	-	36	0	0.00	55	4	6.78
RIC8A	0	genome.wustl.edu	37	11	209475	209475	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	209475	209475	G	A	SNP	RIC8A	ENST00000325207	human	ensembl	74_37	+1	known	silent	c.201	p.L67	1.000	pfam_Gua_nucleotide_exch_fac_Ric8,superfamily_ARM-type_fold	pfam_Gua_nucleotide_exch_fac_Ric8,superfamily_ARM-type_fold,prints_Synembryn	-	no_errors	RIC8A	HGNC	ENSG00000177963				84	0	0.00	74	4	5.13
RNF212	0	genome.wustl.edu	37	4	1087628	1087628	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	1087628	1087628	G	T	SNP	RNF212	ENST00000333673	human	ensembl	74_37	-1	known	missense	c.421	p.P141T	0.000	NULL	pfscan_Znf_RING	-	no_errors	RNF212	HGNC	ENSG00000178222				102	0	0.00	73	4	5.19
RPS14	0	genome.wustl.edu	37	5	149827257	149827257	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	149827257	149827257	C	T	SNP	RPS14	ENST00000312037	human	ensembl	74_37	-1	known	missense	c.40	p.V14I	1.000	pirsf_Ribosomal_S11	pfam_Ribosomal_S11,pirsf_Ribosomal_S11	-	no_errors	RPS14	HGNC	ENSG00000164587	tier1	-	-	59	0	0.00	15	20	57.14
RSC1A1	0	genome.wustl.edu	37	1	15988150	15988150	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	15988150	15988150	G	C	SNP	RSC1A1	ENST00000345034	human	ensembl	74_37	+1	known	missense	c.1787	p.R596P	1.000	superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	RSC1A1	HGNC	ENSG00000215695	tier1	-	-	65	0	0.00	24	6	20.00
SAMD9L	0	genome.wustl.edu	37	7	92764139	92764139	+	Silent	SNP	T	T	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	7	92764139	92764139	T	C	SNP	SAMD9L	ENST00000318238	human	ensembl	74_37	-1	known	silent	c.1146	p.E382	0.574	NULL	superfamily_SAM/pointed,superfamily_P-loop_NTPase,pfscan_SAM	-	no_errors	SAMD9L	HGNC	ENSG00000177409	tier1	-	-	24	0	0.00	17	8	32.00
SCN3A	0	genome.wustl.edu	37	2	165946875	165946875	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	2	165946875	165946875	C	G	SNP	SCN3A	ENST00000283254	human	ensembl	74_37	-1	known	missense	c.5788	p.E1930Q	0.801	NULL	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN3A	HGNC	ENSG00000153253				30	0	0.00	28	3	9.68
SCN9A	0	genome.wustl.edu	37	2	167142872	167142872	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	2	167142872	167142872	C	T	SNP	SCN9A	ENST00000303354	human	ensembl	74_37	-1	known	missense	c.1579	p.E527K	0.589	pfam_DUF3451	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN9A	HGNC	ENSG00000169432	tier1	-	-	69	0	0.00	66	10	13.16
SCRIB	0	genome.wustl.edu	37	8	144896032	144896032	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	8	144896032	144896032	G	A	SNP	SCRIB	ENST00000320476	human	ensembl	74_37	-1	known	silent	c.312	p.C104	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_PDZ,pfam_Leu-rich_rpt,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	SCRIB	HGNC	ENSG00000180900	tier1	-	-	91	0	0.00	62	21	25.30
SCRIB	0	genome.wustl.edu	37	8	144896033	144896033	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	8	144896033	144896033	C	A	SNP	SCRIB	ENST00000320476	human	ensembl	74_37	-1	known	missense	c.311	p.C104F	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_PDZ,pfam_Leu-rich_rpt,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	SCRIB	HGNC	ENSG00000180900	tier1	-	-	93	0	0.00	62	21	25.30
SDAD1P1	0	genome.wustl.edu	37	8	26237201	26237201	+	RNA	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	8	26237201	26237201	C	A	SNP	SDAD1P1	ENST00000519902	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.361	-	-	-	no_errors	SDAD1P1	HGNC	ENSG00000228451	tier1	-	-	66	0	0.00	7	41	85.42
SDHA	0	genome.wustl.edu	37	5	235447	235447	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	235447	235447	A	G	SNP	SDHA	ENST00000264932	human	ensembl	74_37	+1	known	missense	c.1253	p.K418R	1.000	pfam_FAD_bind_dom,tigrfam_Succ_DH_flav_su_fwd,tigrfam_Succ_Dhase_FrdA_Gneg	pfam_FAD_bind_dom,pfam_Fum_Rdtase/Succ_DH_flav-like_C,superfamily_Succ_DH/fumarate_Rdtase_cat,superfamily_Fum_Rdtase/Succ_DH_flav-like_C,tigrfam_Succ_DH_flav_su_fwd,tigrfam_Succ_Dhase_FrdA_Gneg	-	no_errors	SDHA	HGNC	ENSG00000073578	tier1	-	-	104	0	0.00	50	4	7.41
SEC16A	0	genome.wustl.edu	37	9	139369857	139369857	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	9	139369857	139369857	G	A	SNP	SEC16A	ENST00000313050	human	ensembl	74_37	-1	known	silent	c.2211	p.N737	0.994	NULL	NULL	-	no_errors	SEC16A	HGNC	ENSG00000148396				24	0	0.00	20	3	13.04
SEMA6C	0	genome.wustl.edu	37	1	151109436	151109436	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	151109436	151109436	C	T	SNP	SEMA6C	ENST00000368913	human	ensembl	74_37	-1	known	missense	c.871	p.G291R	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,pfscan_Semap_dom	-	no_errors	SEMA6C	HGNC	ENSG00000143434				65	0	0.00	65	4	5.80
SEMG2	0	genome.wustl.edu	37	20	43851148	43851148	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	20	43851148	43851148	G	A	SNP	SEMG2	ENST00000372769	human	ensembl	74_37	+1	known	missense	c.875	p.R292H	0.000	pfam_Semenogelin	pfam_Semenogelin	-	no_errors	SEMG2	HGNC	ENSG00000124157	tier1	rs145586123	-	17	0	0.00	25	11	30.56
SENP3	0	genome.wustl.edu	37	17	7475229	7475232	+	RNA	DEL	AAAT	AAAT	-			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	AAAT	AAAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	17	7475229	7475232	AAAT	-	DEL	SENP3	ENST00000578868	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.927:0.933:0.939:0.946	-	-	-	no_errors	SENP3	HGNC	ENSG00000161956	tier1			29	0	0.00	18	10	35.71
SETD4	0	genome.wustl.edu	37	21	37408484	37408484	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	21	37408484	37408484	C	A	SNP	SETD4	ENST00000332131	human	ensembl	74_37	-1	known	missense	c.1254	p.W418C	0.343	pfam_Rubisco_LSMT_subst-bd,pirsf_Lys_MTase_YDR198C_prd	pfam_Rubisco_LSMT_subst-bd,pfam_SET_dom,pirsf_Lys_MTase_YDR198C_prd	-	no_errors	SETD4	HGNC	ENSG00000185917	tier1	-	-	71	0	0.00	30	32	51.61
SI	0	genome.wustl.edu	37	3	164764732	164764732	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	3	164764732	164764732	C	A	SNP	SI	ENST00000264382	human	ensembl	74_37	-1	known	missense	c.1784	p.G595V	0.998	pfam_Glyco_hydro_31,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	SI	HGNC	ENSG00000090402				39	0	0.00	36	2	5.26
SLC12A4	0	genome.wustl.edu	37	16	67981292	67981292	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	16	67981292	67981292	C	T	SNP	SLC12A4	ENST00000422611	human	ensembl	74_37	-1	known	missense	c.2020	p.A674T	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_K/Cl_cotranspt_1/3,prints_KCL_cotranspt,prints_K/Cl_cotranspt1,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A4	HGNC	ENSG00000124067	tier1	-	-	13	0	0.00	13	6	31.58
SLC18A2	0	genome.wustl.edu	37	10	119017399	119017399	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	10	119017399	119017399	G	T	SNP	SLC18A2	ENST00000298472	human	ensembl	74_37	+1	known	missense	c.987	p.Q329H	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC18A2	HGNC	ENSG00000165646	tier1	-	-	62	0	0.00	33	4	10.81
SLC22A1	0	genome.wustl.edu	37	6	160543205	160543205	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	6	160543205	160543205	G	A	SNP	SLC22A1	ENST00000366963	human	ensembl	74_37	+1	known	missense	c.238	p.A80T	0.000	tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A1	HGNC	ENSG00000175003	tier1	-	-	60	0	0.00	24	24	50.00
SLC25A5	0	genome.wustl.edu	37	X	118603756	118603756	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	X	118603756	118603756	T	A	SNP	SLC25A5	ENST00000317881	human	ensembl	74_37	+1	known	missense	c.244	p.F82I	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier,prints_Aden_trnslctor	-	no_errors	SLC25A5	HGNC	ENSG00000005022				22	0	0.00	25	4	13.79
SLC39A12	0	genome.wustl.edu	37	10	18267003	18267003	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	10	18267003	18267003	G	T	SNP	SLC39A12	ENST00000377369	human	ensembl	74_37	+1	known	missense	c.924	p.Q308H	1.000	NULL	pfam_ZIP	-	no_errors	SLC39A12	HGNC	ENSG00000148482	tier1	-	-	58	0	0.00	49	4	7.55
SLC5A2	0	genome.wustl.edu	37	16	31500047	31500047	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	16	31500047	31500047	C	T	SNP	SLC5A2	ENST00000330498	human	ensembl	74_37	+1	known	missense	c.1234	p.R412C	0.810	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A2	HGNC	ENSG00000140675	tier1	-	-	38	0	0.00	16	11	40.74
SLC7A7	0	genome.wustl.edu	37	14	23248143	23248143	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	14	23248143	23248143	G	T	SNP	SLC7A7	ENST00000285850	human	ensembl	74_37	-1	known	missense	c.629	p.A210D	0.902	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A7	HGNC	ENSG00000155465	tier1	-	-	46	0	0.00	69	4	5.48
SLITRK5	0	genome.wustl.edu	37	13	88327779	88327779	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	13	88327779	88327779	G	A	SNP	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	missense	c.136	p.E46K	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300	tier1	-	-	38	0	0.00	22	9	29.03
SMG8	0	genome.wustl.edu	37	17	57288948	57288948	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	17	57288948	57288948	G	C	SNP	SMG8	ENST00000300917	human	ensembl	74_37	+1	known	missense	c.1536	p.Q512H	1.000	pfam_Smg8/Smg9	pfam_Smg8/Smg9	-	no_errors	SMG8	HGNC	ENSG00000167447	tier1	-	-	38	0	0.00	47	7	12.96
SNAP25	0	genome.wustl.edu	37	20	10287451	10287452	+	RNA	DEL	AC	AC	-			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	20	10287451	10287452	AC	-	DEL	SNAP25	ENST00000495883	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.884:0.856	-	-	-	no_errors	SNAP25	HGNC	ENSG00000132639	tier1			29	0	0.00	44	5	10.20
SNX33	0	genome.wustl.edu	37	15	75942735	75942736	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	15	75942735	75942736	-	C	INS	SNX33	ENST00000308527	human	ensembl	74_37	+1	known	frame_shift_ins	c.1292_1293	p.F434fs	1.000:1.000	pfam_Sorting_nexin_WASP-bd-dom,pirsf_Snx9	pfam_Sorting_nexin_WASP-bd-dom,pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_SH3_domain,smart_Phox,pirsf_Snx9,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SNX33	HGNC	ENSG00000173548	tier1			41	0	0.00	27	4	12.90
SORBS2	0	genome.wustl.edu	37	4	186598448	186598448	+	Silent	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	186598448	186598448	G	T	SNP	SORBS2	ENST00000437304	human	ensembl	74_37	-1	putative	silent	c.195	p.T65	0.996	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_p67phox,prints_SH3_domain	-	no_errors	SORBS2	HGNC	ENSG00000154556				23	0	0.00	24	2	7.69
SPACA3	0	genome.wustl.edu	37	17	31324878	31324878	+	RNA	SNP	A	A	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	17	31324878	31324878	A	T	SNP	SPACA3	ENST00000394637	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.599	-	-	-	no_errors	SPACA3	HGNC	ENSG00000141316	tier1	-	-	17	0	0.00	13	7	35.00
SPATA18	0	genome.wustl.edu	37	4	52948682	52948682	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	52948682	52948682	G	A	SNP	SPATA18	ENST00000505320	human	ensembl	74_37	+1	known	silent	c.1485	p.R495	1.000	NULL	NULL	-	no_errors	SPATA18	HGNC	ENSG00000163071	tier1	-	-	42	0	0.00	25	16	39.02
SPTA1	0	genome.wustl.edu	37	1	158621225	158621225	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	1	158621225	158621225	T	A	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.3409	p.I1137F	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554	tier1	-	-	58	0	0.00	29	45	60.81
SRGAP1	0	genome.wustl.edu	37	12	64474129	64474129	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	12	64474129	64474129	C	T	SNP	SRGAP1	ENST00000355086	human	ensembl	74_37	+1	known	silent	c.1387	p.L463	1.000	NULL	pfam_RhoGAP_dom,pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Fuc/Ara_isomerase_C,smart_FCH_dom,smart_RhoGAP_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	SRGAP1	HGNC	ENSG00000196935	tier1	-	-	48	0	0.00	64	4	5.88
STAG2	0	genome.wustl.edu	37	X	123164976	123164977	+	Splice_Site	INS	-	-	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	X	123164976	123164977	-	T	INS	STAG2	ENST00000218089	human	ensembl	74_37	+1	known	splice_site_ins	c.288+1_288+1	e3+1	1.000:1.000	-	-	-	no_errors	STAG2	HGNC	ENSG00000101972	tier1			41	0	0.00	12	47	79.66
STOX2	0	genome.wustl.edu	37	4	184930364	184930364	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	184930364	184930364	C	T	SNP	STOX2	ENST00000308497	human	ensembl	74_37	+1	known	missense	c.373	p.R125W	0.996	pfam_Storkhead-box_winged-helix	pfam_Storkhead-box_winged-helix	-	no_errors	STOX2	HGNC	ENSG00000173320	tier1	-	-	38	0	0.00	23	14	37.84
SYNJ1	0	genome.wustl.edu	37	21	34015720	34015720	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	21	34015720	34015720	C	T	SNP	SYNJ1	ENST00000433931	human	ensembl	74_37	-1	known	missense	c.3595	p.A1199T	1.000	NULL	pfam_Syja_N,pfam_Endo/exonuclease/phosphatase,pfam_DUF1866,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ1	HGNC	ENSG00000159082	tier1	-	-	64	0	0.00	52	37	41.57
SYNJ1	0	genome.wustl.edu	37	21	34045678	34045678	+	Silent	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	21	34045678	34045678	G	T	SNP	SYNJ1	ENST00000433931	human	ensembl	74_37	-1	known	silent	c.1815	p.P605	0.998	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	pfam_Syja_N,pfam_Endo/exonuclease/phosphatase,pfam_DUF1866,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ1	HGNC	ENSG00000159082	tier1	-	-	48	0	0.00	80	5	5.88
TARS	0	genome.wustl.edu	37	5	33441009	33441009	+	RNA	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	5	33441009	33441009	C	T	SNP	TARS	ENST00000502508	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TARS	HGNC	ENSG00000113407	tier1	-	-	17	0	0.00	6	7	53.85
TAS2R7	0	genome.wustl.edu	37	12	10954756	10954756	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	12	10954756	10954756	C	T	SNP	TAS2R7	ENST00000240687	human	ensembl	74_37	-1	known	silent	c.414	p.V138	0.002	pfam_TAS2_rcpt,pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_TAS2_rcpt,pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	TAS2R7	HGNC	ENSG00000121377	tier1	-	-	50	0	0.00	47	4	7.84
TDO2	0	genome.wustl.edu	37	4	156831349	156831349	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	156831349	156831349	C	A	SNP	TDO2	ENST00000536354	human	ensembl	74_37	+1	known	missense	c.604	p.L202M	1.000	pfam_Trp_2_3_dOase	pfam_Trp_2_3_dOase	-	no_errors	TDO2	HGNC	ENSG00000151790				24	0	0.00	18	2	10.00
TFDP2	0	genome.wustl.edu	37	3	141678557	141678557	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	3	141678557	141678557	G	A	SNP	TFDP2	ENST00000489671	human	ensembl	74_37	-1	known	missense	c.1010	p.A337V	1.000	pfam_Transc_factor_DP_C,pirsf_Transcrpt_fac_DP	pfam_Transc_factor_DP_C,pfam_E2F_TDP,pirsf_Transcrpt_fac_DP	-	no_errors	TFDP2	HGNC	ENSG00000114126				60	0	0.00	38	2	5.00
TGIF1	0	genome.wustl.edu	37	18	3452189	3452189	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	18	3452189	3452189	C	T	SNP	TGIF1	ENST00000330513	human	ensembl	74_37	+1	known	missense	c.212	p.P71L	0.000	NULL	pfam_Homeobox_KN_domain,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	TGIF1	HGNC	ENSG00000177426	tier1	-	-	63	0	0.00	44	40	47.62
TIAM1	0	genome.wustl.edu	37	21	32492818	32492818	+	Silent	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	21	32492818	32492818	G	T	SNP	TIAM1	ENST00000286827	human	ensembl	74_37	-1	known	silent	c.4644	p.S1548	0.999	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Raf-like_ras-bd,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM1	HGNC	ENSG00000156299				48	0	0.00	36	2	5.26
TMC4	0	genome.wustl.edu	37	19	54666449	54666449	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	19	54666449	54666449	G	T	SNP	TMC4	ENST00000301187	human	ensembl	74_37	-1	known	missense	c.1459	p.L487M	1.000	pfam_TMC	pfam_TMC	-	no_errors	TMC4	HGNC	ENSG00000167608	tier1	-	-	65	0	0.00	74	5	6.33
TMEM211	0	genome.wustl.edu	37	22	25334246	25334246	+	Silent	SNP	A	A	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	22	25334246	25334246	A	G	SNP	TMEM211	ENST00000423535	human	ensembl	74_37	-1	known	silent	c.210	p.A70	0.642	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	TMEM211	HGNC	ENSG00000206069	tier1	-	-	53	0	0.00	37	4	9.76
TNRC6B	0	genome.wustl.edu	37	22	40661352	40661353	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	22	40661352	40661353	-	A	INS	TNRC6B	ENST00000454349	human	ensembl	74_37	+1	known	frame_shift_ins	c.1118_1119	p.N375fs	1.000:1.000	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6B	HGNC	ENSG00000100354	tier1			38	0	0.00	24	2	7.69
TRIM77	0	genome.wustl.edu	37	11	89443572	89443572	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	89443572	89443572	A	G	SNP	TRIM77	ENST00000398290	human	ensembl	74_37	+1	known	missense	c.106	p.S36G	0.026	smart_Znf_RING,pfscan_Znf_RING	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM77	HGNC	ENSG00000214414	tier1	-	-	83	0	0.00	86	5	5.49
TRIM77	0	genome.wustl.edu	37	11	89450867	89450867	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	89450867	89450867	C	T	SNP	TRIM77	ENST00000398290	human	ensembl	74_37	+1	known	missense	c.1180	p.P394S	0.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM77	HGNC	ENSG00000214414	tier1	-	-	78	0	0.00	69	19	21.59
TRPC3	0	genome.wustl.edu	37	4	122853924	122853924	+	Silent	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	4	122853924	122853924	G	A	SNP	TRPC3	ENST00000379645	human	ensembl	74_37	-1	known	silent	c.489	p.T163	0.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_TRPC3_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC3	HGNC	ENSG00000138741	tier1	-	-	41	0	0.00	13	14	51.85
TSC2	0	genome.wustl.edu	37	16	2103376	2103376	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	16	2103376	2103376	G	T	SNP	TSC2	ENST00000219476	human	ensembl	74_37	+1	known	missense	c.259	p.D87Y	1.000	pfam_Tuberin_N,superfamily_ARM-type_fold	pfam_Tuberin-type_domain,pfam_Tuberin_N,pfam_Rap_GAP_dom,superfamily_ARM-type_fold,pfscan_Rap_GAP_dom,prints_Tuberin	-	no_errors	TSC2	HGNC	ENSG00000103197	tier1	-	-	94	0	0.00	24	16	40.00
TTN	0	genome.wustl.edu	37	2	179665314	179665314	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	2	179665314	179665314	G	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.391	p.P131A	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				23	0	0.00	35	2	5.41
TXNDC5	0	genome.wustl.edu	37	6	7889014	7889014	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	6	7889014	7889014	C	T	SNP	TXNDC5	ENST00000379757	human	ensembl	74_37	-1	known	missense	c.887	p.R296H	0.359	superfamily_Thioredoxin-like_fold	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,tigrfam_Disulphide_isomerase	-	no_errors	TXNDC5	HGNC	ENSG00000239264	tier1	-	-	71	0	0.00	60	4	6.25
UBQLN3	0	genome.wustl.edu	37	11	5530201	5530201	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	5530201	5530201	A	T	SNP	UBQLN3	ENST00000311659	human	ensembl	74_37	-1	known	missense	c.588	p.H196Q	0.956	superfamily_ARM-type_fold,smart_STI1_HS-bd	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_ARM-type_fold,smart_Ubiquitin_dom,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN3	HGNC	ENSG00000175520	tier1	-	-	75	0	0.00	43	29	40.28
UCKL1	0	genome.wustl.edu	37	20	62572380	62572380	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	20	62572380	62572380	G	A	SNP	UCKL1	ENST00000354216	human	ensembl	74_37	-1	known	missense	c.1039	p.R347C	1.000	NULL	pfam_PRK/URK,pfam_CPT,superfamily_P-loop_NTPase,prints_Uridine_kinase,prints_PRK,tigrfam_Uridine_kinase	-	no_errors	UCKL1	HGNC	ENSG00000198276	tier1	-	-	56	0	0.00	46	24	33.80
USP6NL	0	genome.wustl.edu	37	10	11504478	11504478	+	Silent	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	10	11504478	11504478	G	T	SNP	USP6NL	ENST00000379237	human	ensembl	74_37	-1	known	silent	c.2518	p.R840	0.409	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	USP6NL	HGNC	ENSG00000148429				55	0	0.00	53	3	5.36
VWF	0	genome.wustl.edu	37	12	6080796	6080796	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	12	6080796	6080796	G	A	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	missense	c.7517	p.P2506L	0.000	pirsf_VWF	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799				38	0	0.00	24	2	7.69
WDR66	0	genome.wustl.edu	37	12	122359236	122359236	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	12	122359236	122359236	C	T	SNP	WDR66	ENST00000288912	human	ensembl	74_37	+1	known	nonsense	c.25	p.R9*	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR66	HGNC	ENSG00000158023				26	0	0.00	29	3	9.38
WFDC9	0	genome.wustl.edu	37	20	44237432	44237432	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	20	44237432	44237432	C	T	SNP	WFDC9	ENST00000326000	human	ensembl	74_37	-1	known	missense	c.109	p.E37K	0.002	NULL	NULL	-	no_errors	WFDC9	HGNC	ENSG00000180205	tier1	-	-	46	0	0.00	70	21	23.08
XIRP2	0	genome.wustl.edu	37	2	168099625	168099625	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	2	168099625	168099625	C	T	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	nonsense	c.1723	p.Q575*	1.000	pfam_Actin-binding_Xin_repeat	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092				23	0	0.00	30	2	6.25
XPO4	0	genome.wustl.edu	37	13	21396395	21396395	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	13	21396395	21396395	C	T	SNP	XPO4	ENST00000255305	human	ensembl	74_37	-1	known	missense	c.874	p.A292T	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	XPO4	HGNC	ENSG00000132953				24	0	0.00	41	4	8.89
ZBED4	0	genome.wustl.edu	37	22	50279480	50279480	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	22	50279480	50279480	G	T	SNP	ZBED4	ENST00000216268	human	ensembl	74_37	+1	known	nonsense	c.2170	p.E724*	1.000	superfamily_RNaseH-like_dom	pfam_Znf_BED_prd,pfam_HATC_dom_C,superfamily_RNaseH-like_dom,smart_Znf_BED_prd,pfscan_Znf_BED_prd	-	no_errors	ZBED4	HGNC	ENSG00000100426				31	0	0.00	29	2	6.45
ZCCHC8	0	genome.wustl.edu	37	12	122985317	122985317	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	12	122985317	122985317	G	A	SNP	ZCCHC8	ENST00000336229	human	ensembl	74_37	-1	known	missense	c.71	p.P24L	0.272	NULL	pfam_PSP,pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,smart_PSP,pfscan_Znf_CCHC	-	no_errors	ZCCHC8	HGNC	ENSG00000033030	tier1	-	-	37	0	0.00	53	14	20.90
ZMYM3	0	genome.wustl.edu	37	X	70472901	70472901	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	X	70472901	70472901	C	T	SNP	ZMYM3	ENST00000373988	human	ensembl	74_37	-1	known	missense	c.205	p.D69N	1.000	NULL	pfam_Znf_MYM,pfam_DUF3504,smart_TRASH_dom	-	no_errors	ZMYM3	HGNC	ENSG00000147130	tier1	-	-	53	0	0.00	43	17	28.33
ZNF285	0	genome.wustl.edu	37	19	44890839	44890839	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	19	44890839	44890839	C	T	SNP	ZNF285	ENST00000330997	human	ensembl	74_37	-1	known	missense	c.1568	p.R523Q	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF285	HGNC	ENSG00000267508	tier1	-	-	63	0	0.00	55	48	46.60
ZNF705E	0	genome.wustl.edu	37	11	71526873	71526873	+	RNA	SNP	G	G	A			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	11	71526873	71526873	G	A	SNP	ZNF705E	ENST00000525199	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF705E	HGNC	ENSG00000214534	tier1	-	-	56	0	0.00	20	26	56.52
ZNF865	0	genome.wustl.edu	37	19	56126661	56126661	+	Silent	SNP	C	C	T			TCGA-L5-A8NN-01A-11D-A37C-09	TCGA-L5-A8NN-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	7a1853e1-b739-4c77-9b03-ce2e590953e8	f47b1dab-3bc6-4050-917e-5e94d4bb2c7e	19	56126661	56126661	C	T	SNP	ZNF865	ENST00000568956	human	ensembl	74_37	+1	novel	silent	c.1677	p.F559	0.955	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF865	HGNC	ENSG00000261221	tier1	-	-	16	0	0.00	20	5	20.00
