Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA2	0	genome.wustl.edu	37	9	139903009	139903009	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	9	139903009	139903009	G	A	SNP	ABCA2	ENST00000265662	human	ensembl	74_37	-1	known	silent	c.7134	p.S2378	0.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA2	HGNC	ENSG00000107331	tier1	-	-	80	0	0.00	86	8	8.51
ABLIM2	0	genome.wustl.edu	37	4	8108335	8108335	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	4	8108335	8108335	G	A	SNP	ABLIM2	ENST00000447017	human	ensembl	74_37	-1	known	silent	c.40	p.L14	0.842	NULL	pfam_Znf_LIM,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Znf_LIM,smart_Villin_headpiece,pfscan_Villin_headpiece,pfscan_Znf_LIM	-	no_errors	ABLIM2	HGNC	ENSG00000163995				52	0	0.00	46	4	8.00
ACTBL2	0	genome.wustl.edu	37	5	56778214	56778214	+	Silent	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	5	56778214	56778214	G	T	SNP	ACTBL2	ENST00000423391	human	ensembl	74_37	-1	known	silent	c.321	p.T107	0.097	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTBL2	HGNC	ENSG00000169067				39	0	0.00	53	3	5.36
ADAMTS16	0	genome.wustl.edu	37	5	5242188	5242188	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	5	5242188	5242188	C	A	SNP	ADAMTS16	ENST00000274181	human	ensembl	74_37	+1	known	missense	c.2546	p.P849Q	0.993	pfam_ADAM_spacer1	pfam_ADAM_spacer1,pfam_Peptidase_M12B_N,pfam_Peptidase_M12B,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS16	HGNC	ENSG00000145536	tier1	-	-	82	0	0.00	29	73	71.57
ADCY8	0	genome.wustl.edu	37	8	132051794	132051794	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	8	132051794	132051794	G	A	SNP	ADCY8	ENST00000286355	human	ensembl	74_37	-1	known	silent	c.786	p.L262	0.304	NULL	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY8	HGNC	ENSG00000155897	tier1	-	-	57	0	0.00	62	19	23.46
AFG3L2	0	genome.wustl.edu	37	18	12371665	12371665	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	18	12371665	12371665	G	T	SNP	AFG3L2	ENST00000269143	human	ensembl	74_37	-1	known	missense	c.140	p.A47E	0.000	NULL	pfam_Peptidase_M41,pfam_ATPase_AAA_core,pfam_Pept_M41_FtsH_extracell,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_FtsH	-	no_errors	AFG3L2	HGNC	ENSG00000141385	tier1	-	-	51	0	0.00	62	4	6.06
AHCYL2	0	genome.wustl.edu	37	7	129040214	129040214	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	7	129040214	129040214	C	T	SNP	AHCYL2	ENST00000325006	human	ensembl	74_37	+1	known	nonsense	c.907	p.Q303*	1.000	pfam_Adenosylhomocysteinase,tigrfam_Adenosylhomocysteinase	pfam_Adenosylhomocysteinase,pfam_Ado_hCys_hydrolase_NAD-bd,pfam_D-isomer_2_OHA_DH_NAD-bd,tigrfam_Adenosylhomocysteinase	-	no_errors	AHCYL2	HGNC	ENSG00000158467	tier1	-	-	97	0	0.00	91	5	5.21
AKAP13	0	genome.wustl.edu	37	15	86064675	86064675	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	15	86064675	86064675	C	T	SNP	AKAP13	ENST00000361243	human	ensembl	74_37	+1	known	missense	c.50	p.T17I	0.910	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	AKAP13	HGNC	ENSG00000170776	tier1	-	-	86	0	0.00	73	4	5.19
AKR1CL1	0	genome.wustl.edu	37	10	5200895	5200895	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	10	5200895	5200895	G	T	SNP	AKR1CL1	ENST00000473890	human	ensembl	74_37	-1	novel	missense	c.67	p.P23T	0.572	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1CL1	HGNC	ENSG00000196326				79	0	0.00	75	4	5.06
AKT3	0	genome.wustl.edu	37	1	243801021	243801021	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	243801021	243801021	C	T	SNP	AKT3	ENST00000263826	human	ensembl	74_37	-1	known	silent	c.453	p.L151	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom	-	no_errors	AKT3	HGNC	ENSG00000117020	tier1	-	-	111	0	0.00	55	14	20.29
AMY2B	0	genome.wustl.edu	37	1	104118398	104118399	+	RNA	INS	-	-	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	104118398	104118399	-	A	INS	AMY2B	ENST00000462971	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.005	-	-	-	no_errors	AMY2B	HGNC	ENSG00000240038	tier1			14	0	0.00	21	2	8.70
ANO1	0	genome.wustl.edu	37	11	70028614	70028614	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	70028614	70028614	G	T	SNP	ANO1	ENST00000355303	human	ensembl	74_37	+1	known	missense	c.2410	p.V804L	1.000	pfam_Anoctamin	pfam_Anoctamin	-	no_errors	ANO1	HGNC	ENSG00000131620	tier1	-	-	49	0	0.00	13	23	63.89
AOC3	0	genome.wustl.edu	37	17	41004727	41004727	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	41004727	41004727	C	T	SNP	AOC3	ENST00000308423	human	ensembl	74_37	+1	known	missense	c.1367	p.A456V	0.000	pfam_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_C	pfam_Cu_amine_oxidase_C,pfam_Cu_amine_oxidase_N2,pfam_Cu_amine_oxidase_N3,superfamily_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	-	no_errors	AOC3	HGNC	ENSG00000131471	tier1	-	-	79	0	0.00	44	32	42.11
AP1M1	0	genome.wustl.edu	37	19	16318830	16318830	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	19	16318830	16318830	G	A	SNP	AP1M1	ENST00000444449	human	ensembl	74_37	+1	known	missense	c.268	p.V90M	1.000	pfam_AP_mu_sigma_su,superfamily_Longin-like_dom,pirsf_Clathrin_mu	pfam_Clathrin_mu_C,pfam_AP_mu_sigma_su,superfamily_Clathrin_mu_C,superfamily_Longin-like_dom,pirsf_Clathrin_mu,pfscan_Clathrin_mu_C,prints_Clathrin_mu	-	no_errors	AP1M1	HGNC	ENSG00000072958	tier1	-	-	48	0	0.00	65	4	5.80
APOBEC4	0	genome.wustl.edu	37	1	183617423	183617423	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	183617423	183617423	G	T	SNP	APOBEC4	ENST00000308641	human	ensembl	74_37	-1	known	missense	c.494	p.P165H	0.996	NULL	pfam_APOBEC_N	-	no_errors	APOBEC4	HGNC	ENSG00000173627	tier1	-	-	42	0	0.00	42	4	8.70
ARAF	0	genome.wustl.edu	37	X	47426444	47426444	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	X	47426444	47426444	G	A	SNP	ARAF	ENST00000377045	human	ensembl	74_37	+1	known	missense	c.787	p.V263M	0.002	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Raf-like_ras-bd,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,smart_Raf-like_ras-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Raf-like_ras-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	ARAF	HGNC	ENSG00000078061	tier1	-	-	44	0	0.00	47	4	7.69
ARHGAP21	0	genome.wustl.edu	37	10	24886431	24886431	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	10	24886431	24886431	C	A	SNP	ARHGAP21	ENST00000396432	human	ensembl	74_37	-1	known	missense	c.3279	p.K1093N	0.593	NULL	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_PDZ,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	-	no_errors	ARHGAP21	HGNC	ENSG00000107863	tier1	-	-	95	0	0.00	66	17	20.48
ARHGAP40	0	genome.wustl.edu	37	20	37267426	37267426	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	20	37267426	37267426	G	C	SNP	ARHGAP40	ENST00000373345	human	ensembl	74_37	+1	known	missense	c.905	p.R302T	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP40	HGNC	ENSG00000124143	tier1	-	-	118	0	0.00	94	34	26.56
ARHGAP5	0	genome.wustl.edu	37	14	32623994	32623994	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	14	32623994	32623994	A	G	SNP	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	missense	c.4349	p.Y1450C	1.000	NULL	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852				88	0	0.00	72	4	5.26
ARSJ	0	genome.wustl.edu	37	4	114899598	114899598	+	Silent	SNP	A	A	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	4	114899598	114899598	A	G	SNP	ARSJ	ENST00000315366	human	ensembl	74_37	-1	known	silent	c.393	p.T131	1.000	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSJ	HGNC	ENSG00000180801	tier1	-	-	93	0	0.00	58	5	7.94
ASRGL1	0	genome.wustl.edu	37	11	62159024	62159024	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	62159024	62159024	G	A	SNP	ASRGL1	ENST00000301776	human	ensembl	74_37	+1	known	missense	c.641	p.G214E	1.000	pfam_Peptidase_T2	pfam_Peptidase_T2	-	no_errors	ASRGL1	HGNC	ENSG00000162174	tier1	-	-	30	0	0.00	9	15	62.50
ATAD2	0	genome.wustl.edu	37	8	124392780	124392780	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	8	124392780	124392780	C	T	SNP	ATAD2	ENST00000287394	human	ensembl	74_37	-1	known	silent	c.309	p.R103	0.997	NULL	pfam_ATPase_AAA_core,pfam_Bromodomain,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2	HGNC	ENSG00000156802	tier1	-	-	62	0	0.00	81	5	5.81
ATP10B	0	genome.wustl.edu	37	5	160018126	160018126	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	5	160018126	160018126	G	T	SNP	ATP10B	ENST00000327245	human	ensembl	74_37	-1	known	missense	c.3585	p.F1195L	1.000	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10B	HGNC	ENSG00000118322	tier1	-	-	49	0	0.00	47	4	7.84
ATP13A5	0	genome.wustl.edu	37	3	193082019	193082019	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	3	193082019	193082019	G	A	SNP	ATP13A5	ENST00000342358	human	ensembl	74_37	-1	known	silent	c.114	p.V38	0.000	pfam_ATPase_P-typ_Cation_typ_V,tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_ATPase_P-typ_cation-transptr_N,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A5	HGNC	ENSG00000187527	tier1	-	-	60	0	0.00	54	25	31.25
ATP1A4	0	genome.wustl.edu	37	1	160143923	160143923	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	160143923	160143923	C	T	SNP	ATP1A4	ENST00000368081	human	ensembl	74_37	+1	known	missense	c.2014	p.H672Y	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A4	HGNC	ENSG00000132681	tier1	-	-	53	0	0.00	36	4	10.00
ATP8B3	0	genome.wustl.edu	37	19	1799764	1799764	+	Frame_Shift_Del	DEL	A	A	-			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	19	1799764	1799764	A	-	DEL	ATP8B3	ENST00000526092	human	ensembl	74_37	-1	putative	frame_shift_del	c.1575	p.F525fs	0.016	NULL	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom	-	no_errors	ATP8B3	HGNC	ENSG00000130270	tier1			34	0	0.00	21	4	16.00
BAZ2B	0	genome.wustl.edu	37	2	160205695	160205695	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	160205695	160205695	G	T	SNP	BAZ2B	ENST00000392783	human	ensembl	74_37	-1	known	missense	c.4960	p.L1654I	0.987	NULL	pfam_Bromodomain,pfam_Methyl_CpG_DNA-bd,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_DNA-bd_dom,superfamily_Znf_FYVE_PHD,superfamily_ARM-type_fold,smart_Methyl_CpG_DNA-bd,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Methyl_CpG_DNA-bd,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BAZ2B	HGNC	ENSG00000123636				33	0	0.00	32	2	5.88
BMP15	0	genome.wustl.edu	37	X	50659106	50659106	+	Silent	SNP	C	C	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	X	50659106	50659106	C	A	SNP	BMP15	ENST00000252677	human	ensembl	74_37	+1	known	silent	c.678	p.S226	0.000	NULL	pfam_TGF-b_C,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	BMP15	HGNC	ENSG00000130385	tier1	-	-	49	0	0.00	18	28	60.87
BNC1	0	genome.wustl.edu	37	15	83933212	83933212	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	15	83933212	83933212	T	G	SNP	BNC1	ENST00000345382	human	ensembl	74_37	-1	known	missense	c.791	p.Y264S	0.001	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC1	HGNC	ENSG00000169594	tier1	-	-	109	0	0.00	35	29	45.31
BSN	0	genome.wustl.edu	37	3	49690024	49690024	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	3	49690024	49690024	G	T	SNP	BSN	ENST00000296452	human	ensembl	74_37	+1	known	missense	c.3035	p.R1012L	1.000	NULL	pfam_Znf_piccolo,superfamily_Znf_FYVE_PHD	-	no_errors	BSN	HGNC	ENSG00000164061	tier1	-	-	43	0	0.00	33	17	34.00
BTN3A1	0	genome.wustl.edu	37	6	26412944	26412944	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	6	26412944	26412944	C	T	SNP	BTN3A1	ENST00000476549	human	ensembl	74_37	+1	known	missense	c.1030	p.L344F	0.060	NULL	pfam_Ig_V-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	BTN3A1	HGNC	ENSG00000026950	tier1	-	-	71	0	0.00	31	28	47.46
C11orf45	0	genome.wustl.edu	37	11	128772514	128772514	+	Nonsense_Mutation	SNP	T	T	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	128772514	128772514	T	A	SNP	C11orf45	ENST00000310799	human	ensembl	74_37	-1	known	nonsense	c.376	p.R126*	0.001	NULL	NULL	-	no_errors	C11orf45	HGNC	ENSG00000174370	tier1	-	-	36	0	0.00	48	4	7.69
C12orf55	0	genome.wustl.edu	37	12	96927722	96927723	+	In_Frame_Ins	INS	-	-	CTG			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	12	96927722	96927723	-	CTG	INS	C12orf55	ENST00000524981	human	ensembl	74_37	+1	putative	in_frame_ins	c.1510_1511	p.506in_frame_insA	0.000:0.015	NULL	superfamily_Fibronectin_type3	-	no_errors	C12orf55	HGNC	ENSG00000188596	tier1			58	0	0.00	52	13	20.00
C1QTNF1	0	genome.wustl.edu	37	17	77042652	77042652	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	77042652	77042652	T	A	SNP	C1QTNF1	ENST00000354124	human	ensembl	74_37	+1	known	missense	c.201	p.H67Q	0.001	NULL	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF1	HGNC	ENSG00000173918				59	0	0.00	76	4	5.00
C1QTNF1	0	genome.wustl.edu	37	17	77043850	77043850	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	77043850	77043850	G	A	SNP	C1QTNF1	ENST00000354124	human	ensembl	74_37	+1	known	missense	c.556	p.D186N	0.364	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF1	HGNC	ENSG00000173918				60	0	0.00	81	5	5.81
C1orf127	0	genome.wustl.edu	37	1	11015170	11015171	+	Frame_Shift_Ins	INS	-	-	GAAC			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	11015170	11015171	-	GAAC	INS	C1orf127	ENST00000377004	human	ensembl	74_37	-1	known	frame_shift_ins	c.852_851	p.Y285fs	0.000:0.000	NULL	superfamily_DNA-bd_dom_put	-	no_errors	C1orf127	HGNC	ENSG00000175262	tier1			42	0	0.00	42	7	14.29
C1orf167	0	genome.wustl.edu	37	1	11838983	11838983	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	11838983	11838983	G	T	SNP	C1orf167	ENST00000433342	human	ensembl	74_37	+1	known	missense	c.2569	p.V857F	0.105	NULL	NULL	-	no_errors	C1orf167	HGNC	ENSG00000215910	tier1	-	-	176	0	0.00	135	22	13.92
C2orf71	0	genome.wustl.edu	37	2	29295183	29295183	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	29295183	29295183	C	T	SNP	C2orf71	ENST00000331664	human	ensembl	74_37	-1	known	missense	c.1945	p.V649M	0.000	NULL	NULL	-	no_errors	C2orf71	HGNC	ENSG00000179270				44	0	0.00	34	3	8.11
C8B	0	genome.wustl.edu	37	1	57415411	57415411	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	57415411	57415411	G	T	SNP	C8B	ENST00000371237	human	ensembl	74_37	-1	known	nonsense	c.681	p.Y227*	0.996	NULL	pfam_MACPF,pfam_LDrepeatLR_classA_rpt,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,pfscan_LDrepeatLR_classA_rpt,pfscan_Thrombospondin_1_rpt,prints_MAC_perforin	-	no_errors	C8B	HGNC	ENSG00000021852	tier1	-	-	60	0	0.00	51	4	7.27
CACNA1E	0	genome.wustl.edu	37	1	181750615	181750615	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	181750615	181750615	C	A	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	missense	c.5320	p.P1774T	1.000	pfscan_EF_hand_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	tier1	-	-	66	0	0.00	36	14	28.00
CACNA1I	0	genome.wustl.edu	37	22	40037141	40037141	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	22	40037141	40037141	C	T	SNP	CACNA1I	ENST00000336649	human	ensembl	74_37	+1	known	missense	c.1010	p.A337V	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1I	HGNC	ENSG00000100346	tier1	-	-	40	0	0.00	40	4	8.89
CACNA2D4	0	genome.wustl.edu	37	12	1993438	1993438	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	12	1993438	1993438	C	T	SNP	CACNA2D4	ENST00000382722	human	ensembl	74_37	-1	known	missense	c.1322	p.R441H	0.789	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D4	HGNC	ENSG00000151062	tier1	-	-	80	0	0.00	69	4	5.48
CCAR1	0	genome.wustl.edu	37	10	70482290	70482290	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	10	70482290	70482290	C	A	SNP	CCAR1	ENST00000265872	human	ensembl	74_37	+1	known	missense	c.29	p.P10Q	1.000	NULL	pfam_SAP_dom,superfamily_NA-bd_OB-fold,smart_SAP_dom,pfscan_SAP_dom	-	no_errors	CCAR1	HGNC	ENSG00000060339	tier1	-	-	73	0	0.00	75	4	5.06
CCDC102A	0	genome.wustl.edu	37	16	57559951	57559951	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	16	57559951	57559951	G	A	SNP	CCDC102A	ENST00000258214	human	ensembl	74_37	-1	known	missense	c.674	p.P225L	0.000	NULL	NULL	-	no_errors	CCDC102A	HGNC	ENSG00000135736	tier1	-	-	56	0	0.00	45	15	25.00
CCDC170	0	genome.wustl.edu	37	6	151894421	151894421	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	6	151894421	151894421	G	T	SNP	CCDC170	ENST00000367290	human	ensembl	74_37	+1	known	missense	c.887	p.S296I	0.020	NULL	superfamily_Prefoldin,superfamily_Smac_DIABLO-like	-	no_errors	CCDC170	HGNC	ENSG00000120262	tier1	-	-	76	0	0.00	74	4	5.13
CCDC180	0	genome.wustl.edu	37	9	100077199	100077199	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	9	100077199	100077199	G	T	SNP	CCDC180	ENST00000375202	human	ensembl	74_37	+1	known	missense	c.898	p.V300L	0.726	NULL	NULL	-	no_errors	CCDC180	HGNC	ENSG00000197816	tier1	-	-	46	0	0.00	47	4	7.69
CCDC3	0	genome.wustl.edu	37	10	12940592	12940592	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	10	12940592	12940592	G	T	SNP	CCDC3	ENST00000378825	human	ensembl	74_37	-1	known	missense	c.637	p.R213S	0.997	NULL	NULL	-	no_errors	CCDC3	HGNC	ENSG00000151468	tier1	-	-	44	0	0.00	18	4	18.18
CCDC64B	0	genome.wustl.edu	37	16	3078433	3078433	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	16	3078433	3078433	C	T	SNP	CCDC64B	ENST00000389347	human	ensembl	74_37	-1	known	silent	c.1275	p.S425	0.954	NULL	superfamily_Sig_transdc_His_kinase_dimeric	-	no_errors	CCDC64B	HGNC	ENSG00000162069	tier1	-	-	13	0	0.00	1	5	83.33
CDK5RAP3	0	genome.wustl.edu	37	17	46051389	46051389	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	46051389	46051389	C	T	SNP	CDK5RAP3	ENST00000338399	human	ensembl	74_37	+1	known	missense	c.277	p.R93W	1.000	pfam_DUF773	pfam_DUF773	-	no_errors	CDK5RAP3	HGNC	ENSG00000108465	tier1	-	-	31	0	0.00	54	5	8.47
CENPV	0	genome.wustl.edu	37	17	16256469	16256471	+	In_Frame_Del	DEL	CGG	CGG	-			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	CGG	CGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	16256469	16256471	CGG	-	DEL	CENPV	ENST00000299736	human	ensembl	74_37	-1	known	in_frame_del	c.282_280	p.P94in_frame_del	0.235:0.239:0.231	NULL	pfam_GFA/CENP-V,superfamily_Mss4-like	-	no_errors	CENPV	HGNC	ENSG00000166582	tier1			23	0	0.00	14	2	12.50
CGN	0	genome.wustl.edu	37	1	151506465	151506465	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	151506465	151506465	G	A	SNP	CGN	ENST00000271636	human	ensembl	74_37	+1	known	silent	c.2757	p.R919	1.000	pfam_Myosin_tail	pfam_Myosin_tail	-	no_errors	CGN	HGNC	ENSG00000143375	tier1	-	-	54	0	0.00	55	5	8.33
CHFR	0	genome.wustl.edu	37	12	133438075	133438075	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	12	133438075	133438075	G	A	SNP	CHFR	ENST00000266880	human	ensembl	74_37	-1	known	silent	c.765	p.P255	0.007	NULL	pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_Znf_RING,pfscan_FHA_dom,pfscan_Znf_RING	-	no_errors	CHFR	HGNC	ENSG00000072609	tier1	-	-	100	0	0.00	70	48	40.68
CHML	0	genome.wustl.edu	37	1	241798619	241798619	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	241798619	241798619	G	T	SNP	CHML	ENST00000366553	human	ensembl	74_37	-1	known	missense	c.450	p.S150R	0.000	pirsf_Rab_geranylTrfase_A_euk	pfam_GDP_dissociation_inhibitor,pirsf_Rab_geranylTrfase_A_euk,prints_Rab_escort,prints_GDP_dissociation_inhibitor	-	no_errors	CHML	HGNC	ENSG00000203668				51	0	0.00	43	3	6.52
CILP	0	genome.wustl.edu	37	15	65491165	65491165	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	15	65491165	65491165	C	T	SNP	CILP	ENST00000261883	human	ensembl	74_37	-1	known	missense	c.1459	p.E487K	0.998	NULL	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,superfamily_CarboxyPept-like_regulatory,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	CILP	HGNC	ENSG00000138615				50	0	0.00	34	4	10.53
CNTN2	0	genome.wustl.edu	37	1	205033765	205033765	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	205033765	205033765	C	T	SNP	CNTN2	ENST00000331830	human	ensembl	74_37	+1	known	missense	c.1406	p.P469L	0.997	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN2	HGNC	ENSG00000184144				46	0	0.00	19	2	9.52
CNTNAP3B	0	genome.wustl.edu	37	9	43915463	43915463	+	Silent	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	9	43915463	43915463	G	T	SNP	CNTNAP3B	ENST00000377564	human	ensembl	74_37	+1	known	silent	c.3546	p.A1182	0.975	pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP3B	HGNC	ENSG00000154529	tier1	-	-	16	0	0.00	14	5	26.32
CPNE2	0	genome.wustl.edu	37	16	57153173	57153173	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	16	57153173	57153173	C	T	SNP	CPNE2	ENST00000290776	human	ensembl	74_37	+1	known	silent	c.574	p.L192	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom	-	no_errors	CPNE2	HGNC	ENSG00000140848	tier1	-	-	57	0	0.00	87	5	5.43
CPQ	0	genome.wustl.edu	37	8	98155409	98155409	+	Nonstop_Mutation	SNP	T	T	C			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	8	98155409	98155409	T	C	SNP	CPQ	ENST00000220763	human	ensembl	74_37	+1	known	nonstop	c.1417	p.*473Q	0.147	NULL	pfam_Peptidase_M28,pfam_Peptidase_M20	-	no_errors	CPQ	HGNC	ENSG00000104324	tier1	-	-	126	0	0.00	99	42	29.79
CSGALNACT1	0	genome.wustl.edu	37	8	19315123	19315124	+	RNA	INS	-	-	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	8	19315123	19315124	-	A	INS	CSGALNACT1	ENST00000518542	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004:0.009	-	-	-	no_errors	CSGALNACT1	HGNC	ENSG00000147408	tier1			11	0	0.00	9	3	25.00
CTNNA1	0	genome.wustl.edu	37	5	138261083	138261083	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	5	138261083	138261083	T	A	SNP	CTNNA1	ENST00000302763	human	ensembl	74_37	+1	known	missense	c.1886	p.V629E	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Alpha_catenin,prints_Vinculin	-	no_errors	CTNNA1	HGNC	ENSG00000044115	tier1	-	-	68	0	0.00	37	4	9.76
CTTNBP2NL	0	genome.wustl.edu	37	1	112958899	112958899	+	RNA	DEL	A	A	-			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	112958899	112958899	A	-	DEL	CTTNBP2NL	ENST00000502356	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTTNBP2NL	HGNC	ENSG00000143079	tier1			34	0	0.00	35	7	16.67
CXXC11	0	genome.wustl.edu	37	2	242815165	242815165	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	242815165	242815165	C	T	SNP	CXXC11	ENST00000343216	human	ensembl	74_37	+1	known	silent	c.1458	p.G486	0.001	NULL	NULL	-	no_errors	CXXC11	HGNC	ENSG00000188011	tier1	-	-	99	0	0.00	85	22	20.56
CXorf30	0	genome.wustl.edu	37	X	36324886	36324886	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	X	36324886	36324886	G	T	SNP	CXorf30	ENST00000378657	human	ensembl	74_37	+1	known	splice_site	c.421-1	e5-1	0.625	-	-	-	no_errors	CXorf30	HGNC	ENSG00000205081				28	0	0.00	65	4	5.80
DAGLB	0	genome.wustl.edu	37	7	6464413	6464413	+	Silent	SNP	C	C	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	7	6464413	6464413	C	A	SNP	DAGLB	ENST00000297056	human	ensembl	74_37	-1	known	silent	c.1110	p.V370	1.000	pfam_Lipase_3	pfam_Lipase_3	-	no_errors	DAGLB	HGNC	ENSG00000164535	tier1	-	-	31	0	0.00	30	4	11.76
DAPP1	0	genome.wustl.edu	37	4	100774455	100774455	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	4	100774455	100774455	G	T	SNP	DAPP1	ENST00000512369	human	ensembl	74_37	+1	known	missense	c.439	p.A147S	0.999	NULL	pfam_SH2,pfam_Pleckstrin_homology,smart_SH2,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_SH2,prints_SH2	-	no_errors	DAPP1	HGNC	ENSG00000070190				69	0	0.00	55	3	5.17
DCLK3	0	genome.wustl.edu	37	3	36779753	36779753	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	3	36779753	36779753	G	A	SNP	DCLK3	ENST00000416516	human	ensembl	74_37	-1	known	missense	c.398	p.S133L	0.068	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DCLK3	HGNC	ENSG00000163673	tier1	rs201773927	-	58	0	0.00	32	17	34.69
DENND2A	0	genome.wustl.edu	37	7	140269504	140269504	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	7	140269504	140269504	C	T	SNP	DENND2A	ENST00000275884	human	ensembl	74_37	-1	known	missense	c.1481	p.R494Q	1.000	NULL	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND2A	HGNC	ENSG00000146966	tier1	-	-	77	0	0.00	77	5	6.10
DHX32	0	genome.wustl.edu	37	10	127555659	127555659	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	10	127555659	127555659	G	C	SNP	DHX32	ENST00000284690	human	ensembl	74_37	-1	known	missense	c.376	p.L126V	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_ATP-bd	pfam_Helicase-assoc_dom,pfam_DUF1605,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd	-	no_errors	DHX32	HGNC	ENSG00000089876				72	0	0.00	45	4	8.16
DMAP1	0	genome.wustl.edu	37	1	44680151	44680151	+	RNA	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	44680151	44680151	C	T	SNP	DMAP1	ENST00000463950	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.056	-	-	-	no_errors	DMAP1	HGNC	ENSG00000178028	tier1	-	-	117	0	0.00	86	18	17.31
DMD	0	genome.wustl.edu	37	X	31341748	31341748	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	X	31341748	31341748	G	A	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.9191	p.A3064V	1.000	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pirsf_Dystrophin/utrophin,pfscan_WW_dom	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	66	0	0.00	67	4	5.63
DNAH10	0	genome.wustl.edu	37	12	124337760	124337760	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	12	124337760	124337760	C	T	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	missense	c.5945	p.A1982V	1.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653	tier1	-	-	100	0	0.00	74	38	33.93
DNAJC24	0	genome.wustl.edu	37	11	31436406	31436406	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	31436406	31436406	G	T	SNP	DNAJC24	ENST00000465995	human	ensembl	74_37	+1	known	nonsense	c.160	p.E54*	0.997	pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	pfam_DnaJ_domain,pfam_Znf_DHP,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_Znf_DHP,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC24	HGNC	ENSG00000170946	tier1	-	-	63	0	0.00	63	28	30.77
DOCK4	0	genome.wustl.edu	37	7	111407142	111407142	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	7	111407142	111407142	C	A	SNP	DOCK4	ENST00000428084	human	ensembl	74_37	-1	known	missense	c.3861	p.K1287N	1.000	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK4	HGNC	ENSG00000128512	tier1	-	-	50	0	0.00	25	5	16.67
DPY19L2	0	genome.wustl.edu	37	12	63963039	63963040	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	12	63963039	63963040	AT	-	DEL	DPY19L2	ENST00000324472	human	ensembl	74_37	-1	known	frame_shift_del	c.2091_2090	p.Y697fs	0.987:0.997	pfam_Dpy-19	pfam_Dpy-19	-	no_errors	DPY19L2	HGNC	ENSG00000177990	tier1			172	0	0.00	149	50	25.13
DTNA	0	genome.wustl.edu	37	18	32431858	32431858	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	18	32431858	32431858	A	T	SNP	DTNA	ENST00000269190	human	ensembl	74_37	+1	known	missense	c.1420	p.R474W	0.999	pirsf_Distrobrevin	pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_Znf_ZZ,smart_Znf_ZZ,pirsf_Distrobrevin,pfscan_Znf_ZZ	-	no_errors	DTNA	HGNC	ENSG00000134769	tier1	-	-	49	0	0.00	21	4	16.00
DYSF	0	genome.wustl.edu	37	2	71766292	71766292	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	71766292	71766292	G	A	SNP	DYSF	ENST00000413539	human	ensembl	74_37	+1	known	missense	c.1496	p.R499H	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	DYSF	HGNC	ENSG00000135636				65	0	0.00	48	3	5.88
EGFLAM	0	genome.wustl.edu	37	5	38258922	38258922	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	5	38258922	38258922	G	A	SNP	EGFLAM	ENST00000354891	human	ensembl	74_37	+1	known	silent	c.66	p.A22	0.000	NULL	pfam_Laminin_G,pfam_Fibronectin_type3,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Laminin_G	-	no_errors	EGFLAM	HGNC	ENSG00000164318	tier1	-	-	72	0	0.00	55	8	12.70
EHBP1L1	0	genome.wustl.edu	37	11	65343817	65343817	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	65343817	65343817	C	T	SNP	EHBP1L1	ENST00000309295	human	ensembl	74_37	+1	known	missense	c.44	p.A15V	1.000	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	EHBP1L1	HGNC	ENSG00000173442	tier1	-	-	97	0	0.00	59	4	6.35
ELFN2	0	genome.wustl.edu	37	22	37769599	37769599	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	22	37769599	37769599	C	T	SNP	ELFN2	ENST00000402918	human	ensembl	74_37	-1	known	missense	c.1976	p.G659D	0.595	NULL	superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,pfscan_LPXTG_anchor	-	no_errors	ELFN2	HGNC	ENSG00000166897	tier1	-	-	28	0	0.00	5	9	64.29
ELMO3	0	genome.wustl.edu	37	16	67236656	67236656	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	16	67236656	67236656	C	T	SNP	ELMO3	ENST00000393997	human	ensembl	74_37	+1	known	missense	c.1684	p.R562W	1.000	NULL	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO3	HGNC	ENSG00000102890	tier1	-	-	54	0	0.00	78	5	6.02
ELP4	0	genome.wustl.edu	37	11	31616371	31616371	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	31616371	31616371	G	A	SNP	ELP4	ENST00000395934	human	ensembl	74_37	+1	known	missense	c.436	p.V146I	0.000	pfam_Elongator_complex_protein_4	pfam_Elongator_complex_protein_4,superfamily_P-loop_NTPase	-	no_errors	ELP4	HGNC	ENSG00000109911	tier1	-	-	62	0	0.00	39	17	30.36
ENSG00000188850	0	genome.wustl.edu	37	5	43348817	43348817	+	RNA	DEL	A	A	-			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	5	43348817	43348817	A	-	DEL	ENSG00000188850	ENST00000511991	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-159F24.2	Clone_based_vega_gene	ENSG00000188850	tier1			19	0	0.00	17	3	15.00
ENSG00000222031	0	genome.wustl.edu	37	2	151900307	151900307	+	Nonsense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	151900307	151900307	G	A	SNP	ENSG00000222031	ENST00000409243	human	ensembl	74_37	-1	putative	nonsense	c.106	p.Q36*	0.040	NULL	NULL	-	no_errors	AC023469.1	Clone_based_vega_gene	ENSG00000222031	tier1	-	-	54	0	0.00	51	12	19.05
ENSG00000225411	0	genome.wustl.edu	37	9	68400475	68400475	+	RNA	SNP	T	T	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	9	68400475	68400475	T	G	SNP	ENSG00000225411	ENST00000417843	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	RP11-764K9.1	Clone_based_vega_gene	ENSG00000225411	tier1	rs75317582	-	17	0	0.00	13	7	35.00
ENSG00000225411	0	genome.wustl.edu	37	9	68400495	68400495	+	RNA	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	9	68400495	68400495	C	T	SNP	ENSG00000225411	ENST00000417843	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.113	-	-	-	no_errors	RP11-764K9.1	Clone_based_vega_gene	ENSG00000225411	tier1	-	-	16	0	0.00	13	5	27.78
ENSG00000232274	0	genome.wustl.edu	37	1	143189125	143189125	+	RNA	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	143189125	143189125	G	A	SNP	ENSG00000232274	ENST00000447389	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	RP11-782C8.2	Clone_based_vega_gene	ENSG00000232274	tier1	rs201126579	-	18	0	0.00	13	5	27.78
ENSG00000241956	0	genome.wustl.edu	37	5	164028110	164028110	+	RNA	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	5	164028110	164028110	G	A	SNP	ENSG00000241956	ENST00000486913	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	CTC-340A15.2	Clone_based_vega_gene	ENSG00000241956	tier1	-	-	119	0	0.00	42	43	50.59
ENSG00000258856	0	genome.wustl.edu	37	14	58097159	58097159	+	RNA	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	14	58097159	58097159	C	T	SNP	ENSG00000258856	ENST00000600311	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.975	-	-	-	no_errors	CTD-2325K12.1	Clone_based_vega_gene	ENSG00000258856	tier1	-	-	29	0	0.00	27	13	32.50
ENSG00000263404	0	genome.wustl.edu	37	9	84420936	84420937	+	RNA	INS	-	-	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	9	84420936	84420937	-	G	INS	ENSG00000263404	ENST00000581036	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	AL158154.1	Clone_based_ensembl_gene	ENSG00000263404	tier1			23	0	0.00	14	3	17.65
ENSG00000266248	0	genome.wustl.edu	37	19	30017607	30017607	+	RNA	DEL	G	G	-			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	19	30017607	30017607	G	-	DEL	ENSG00000266248	ENST00000579268	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.009	-	-	-	no_errors	CTC-525D6.2	Clone_based_vega_gene	ENSG00000266248	tier1			55	0	0.00	31	4	11.43
ENSG00000268864	0	genome.wustl.edu	37	19	54105311	54105311	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	19	54105311	54105311	A	C	SNP	ENSG00000268864	ENST00000600193	human	ensembl	74_37	-1	putative	missense	c.145	p.C49G	0.000	NULL	NULL	-	no_errors	CTB-167G5.5	Clone_based_vega_gene	ENSG00000268864	tier1	-	-	33	0	0.00	31	18	36.73
ENTHD2	0	genome.wustl.edu	37	17	79210792	79210792	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	79210792	79210792	G	A	SNP	ENTHD2	ENST00000300714	human	ensembl	74_37	-1	known	silent	c.201	p.H67	0.792	pfam_Epsin_dom_N,superfamily_ENTH_VHS	pfam_Epsin_dom_N,superfamily_ENTH_VHS	-	no_errors	ENTHD2	HGNC	ENSG00000167302	tier1	-	-	105	0	0.00	86	47	35.34
ENTPD1-AS1	0	genome.wustl.edu	37	10	97515948	97515948	+	RNA	SNP	T	T	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	10	97515948	97515948	T	G	SNP	ENTPD1-AS1	ENST00000416301	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.969	-	-	-	no_errors	ENTPD1-AS1	HGNC	ENSG00000226688				72	0	0.00	67	5	6.94
EXPH5	0	genome.wustl.edu	37	11	108382592	108382592	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	108382592	108382592	G	T	SNP	EXPH5	ENST00000265843	human	ensembl	74_37	-1	known	nonsense	c.3642	p.C1214*	0.044	NULL	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	-	no_errors	EXPH5	HGNC	ENSG00000110723				76	0	0.00	59	4	6.35
EYS	0	genome.wustl.edu	37	6	65300723	65300723	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	6	65300723	65300723	C	T	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	missense	c.5037	p.M1679I	0.000	NULL	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107				36	0	0.00	30	2	6.25
FAM110B	0	genome.wustl.edu	37	8	59059539	59059539	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	8	59059539	59059539	C	T	SNP	FAM110B	ENST00000361488	human	ensembl	74_37	+1	known	silent	c.750	p.V250	0.999	NULL	NULL	-	no_errors	FAM110B	HGNC	ENSG00000169122	tier1	-	-	42	0	0.00	32	12	27.27
FAM131B	0	genome.wustl.edu	37	7	143054514	143054514	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	7	143054514	143054514	C	T	SNP	FAM131B	ENST00000443739	human	ensembl	74_37	-1	known	missense	c.469	p.V157I	0.993	NULL	NULL	-	no_errors	FAM131B	HGNC	ENSG00000159784	tier1	-	-	49	0	0.00	39	15	27.78
FAM182A	0	genome.wustl.edu	37	20	26063533	26063533	+	RNA	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	20	26063533	26063533	G	A	SNP	FAM182A	ENST00000376398	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.092	-	-	-	no_errors	FAM182A	HGNC	ENSG00000125804	tier1	-	-	21	0	0.00	29	7	19.44
FBLN2	0	genome.wustl.edu	37	3	13671357	13671357	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	3	13671357	13671357	C	T	SNP	FBLN2	ENST00000404922	human	ensembl	74_37	+1	known	silent	c.2880	p.C960	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_Anaphylatoxin/fibulin,superfamily_Anaphylatoxin_comp_syst,smart_EG-like_dom,smart_Anaphylatoxin/fibulin,smart_EGF-like_Ca-bd_dom,pfscan_Anaphylatoxin/fibulin,pfscan_EG-like_dom	-	no_errors	FBLN2	HGNC	ENSG00000163520	tier1	-	-	82	0	0.00	75	5	6.17
FBXO42	0	genome.wustl.edu	37	1	16632345	16632345	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	16632345	16632345	C	T	SNP	FBXO42	ENST00000375592	human	ensembl	74_37	-1	known	missense	c.320	p.R107H	1.000	NULL	pfam_Kelch_2,pfam_Kelch_1,pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO42	HGNC	ENSG00000037637	tier1	-	-	53	0	0.00	44	4	8.33
FDX1L	0	genome.wustl.edu	37	19	10421305	10421305	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	19	10421305	10421305	G	A	SNP	FDX1L	ENST00000393708	human	ensembl	74_37	-1	known	silent	c.409	p.L137	1.000	pfam_2Fe-2S_ferredoxin-type,superfamily_2Fe-2S_ferredoxin-type,pfscan_2Fe-2S_ferredoxin-type,prints_Adrenodoxin	pfam_2Fe-2S_ferredoxin-type,superfamily_2Fe-2S_ferredoxin-type,pfscan_2Fe-2S_ferredoxin-type,prints_Adrenodoxin	-	no_errors	FDX1L	HGNC	ENSG00000267673	tier1	-	-	54	0	0.00	60	4	6.25
FJX1	0	genome.wustl.edu	37	11	35642248	35642248	+	RNA	DEL	A	A	-			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	35642248	35642248	A	-	DEL	FJX1	ENST00000532914	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	FJX1	HGNC	ENSG00000179431	tier1			54	0	0.00	60	20	25.00
FLG	0	genome.wustl.edu	37	1	152279935	152279935	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	152279935	152279935	G	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.7427	p.S2476Y	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	171	0	0.00	118	81	40.70
FLG2	0	genome.wustl.edu	37	1	152327619	152327619	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	152327619	152327619	G	A	SNP	FLG2	ENST00000388718	human	ensembl	74_37	-1	known	silent	c.2643	p.Y881	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG2	HGNC	ENSG00000143520	tier1	-	-	175	0	0.00	107	66	37.93
FOXG1	0	genome.wustl.edu	37	14	29237109	29237109	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	14	29237109	29237109	C	T	SNP	FOXG1	ENST00000313071	human	ensembl	74_37	+1	known	silent	c.624	p.Y208	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXG1	HGNC	ENSG00000176165	tier1	-	-	70	0	0.00	44	30	40.54
FTCD	0	genome.wustl.edu	37	21	47574184	47574184	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	21	47574184	47574184	G	A	SNP	FTCD	ENST00000359679	human	ensembl	74_37	-1	known	silent	c.117	p.D39	0.766	pfam_Formiminotransferase_N,superfamily_FormiminoTrfase_N/C_subdom,tigrfam_Formiminotransferase_cat	pfam_Formiminotransferase_N,pfam_Formiminotransferase_C,pfam_Cyclodeamin/CycHdrlase,superfamily_FormiminoTrfase_N/C_subdom,superfamily_Cyclodeamin/CycHdrlase,tigrfam_Formiminotransferase_cat	-	no_errors	FTCD	HGNC	ENSG00000160282	tier1	-	-	161	0	0.00	92	22	19.30
GABBR1	0	genome.wustl.edu	37	6	29573436	29573438	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	6	29573436	29573438	CAG	-	DEL	GABBR1	ENST00000377034	human	ensembl	74_37	-1	known	in_frame_del	c.2349_2347	p.L783in_frame_del	0.997:1.000:1.000	pfam_GPCR_3_C,pfscan_GPCR_3_C	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Sushi_SCR_CCP,superfamily_Peripla_BP_I,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,pfscan_Sushi_SCR_CCP,pfscan_GPCR_3_C	-	no_errors	GABBR1	HGNC	ENSG00000204681	tier1			40	0	0.00	17	3	15.00
GABBR2	0	genome.wustl.edu	37	9	101304292	101304292	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	9	101304292	101304292	C	T	SNP	GABBR2	ENST00000259455	human	ensembl	74_37	-1	known	missense	c.493	p.D165N	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3	pfam_GPCR_3_C,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_GABA_rcpt_B2,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,prints_GPCR_3,pfscan_GPCR_3_C	-	no_errors	GABBR2	HGNC	ENSG00000136928	tier1	-	-	60	0	0.00	46	18	28.12
GALR2	0	genome.wustl.edu	37	17	74070978	74070978	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	74070978	74070978	G	A	SNP	GALR2	ENST00000329003	human	ensembl	74_37	+1	known	missense	c.14	p.G5D	0.018	prints_GAL2_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Galanin_rcpt,prints_GAL2_rcpt	-	no_errors	GALR2	HGNC	ENSG00000182687	tier1	-	-	51	0	0.00	48	4	7.69
GAS7	0	genome.wustl.edu	37	17	9939846	9939846	+	RNA	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	9939846	9939846	C	T	SNP	GAS7	ENST00000578655	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GAS7	HGNC	ENSG00000007237	tier1	-	-	14	0	0.00	6	5	45.45
GCC1	0	genome.wustl.edu	37	7	127222498	127222498	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	7	127222498	127222498	G	T	SNP	GCC1	ENST00000321407	human	ensembl	74_37	-1	known	missense	c.1898	p.T633K	0.035	NULL	pfam_GRIP,superfamily_ARM-type_fold,smart_GRIP,pfscan_GRIP	-	no_errors	GCC1	HGNC	ENSG00000179562	tier1	-	-	58	0	0.00	59	4	6.35
GCC1	0	genome.wustl.edu	37	7	127225152	127225152	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	7	127225152	127225152	G	T	SNP	GCC1	ENST00000321407	human	ensembl	74_37	-1	known	missense	c.85	p.L29I	0.081	NULL	pfam_GRIP,superfamily_ARM-type_fold,smart_GRIP,pfscan_GRIP	-	no_errors	GCC1	HGNC	ENSG00000179562				37	0	0.00	31	2	6.06
GJC2	0	genome.wustl.edu	37	1	228346575	228346575	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	228346575	228346575	G	A	SNP	GJC2	ENST00000366714	human	ensembl	74_37	+1	known	silent	c.1116	p.S372	0.328	NULL	pfam_Connexin_N,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin	-	no_errors	GJC2	HGNC	ENSG00000198835	tier1	-	-	9	0	0.00	4	5	55.56
GLB1L3	0	genome.wustl.edu	37	11	134162099	134162099	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	134162099	134162099	C	A	SNP	GLB1L3	ENST00000431683	human	ensembl	74_37	+1	known	missense	c.803	p.T268N	0.041	pfam_Glycoside_Hdrlase_35,superfamily_Glycoside_hydrolase_SF	pfam_Glycoside_Hdrlase_35,pfam_Glyco_hydro_42_N,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,prints_Glycoside_Hdrlase_35	-	no_errors	GLB1L3	HGNC	ENSG00000166105	tier1	-	-	62	0	0.00	15	19	54.29
GPAT2	0	genome.wustl.edu	37	2	96690074	96690074	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	96690074	96690074	G	A	SNP	GPAT2	ENST00000359548	human	ensembl	74_37	-1	known	missense	c.1681	p.R561W	0.832	NULL	smart_Plipid/glycerol_acylTrfase	-	no_errors	GPAT2	HGNC	ENSG00000186281	tier1	-	-	71	0	0.00	42	15	26.32
GPC1	0	genome.wustl.edu	37	2	241405643	241405643	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	241405643	241405643	C	T	SNP	GPC1	ENST00000264039	human	ensembl	74_37	+1	known	missense	c.1613	p.P538L	0.000	pfam_Glypican	pfam_Glypican	-	no_errors	GPC1	HGNC	ENSG00000063660	tier1	-	-	152	0	0.00	107	23	17.69
GPR21	0	genome.wustl.edu	37	9	125797678	125797678	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	9	125797678	125797678	C	T	SNP	GPR21	ENST00000373642	human	ensembl	74_37	+1	known	missense	c.833	p.T278I	0.869	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR21	HGNC	ENSG00000188394	tier1	-	-	69	0	0.00	76	4	5.00
GPR32	0	genome.wustl.edu	37	19	51274368	51274368	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	19	51274368	51274368	G	A	SNP	GPR32	ENST00000270590	human	ensembl	74_37	+1	known	missense	c.511	p.A171T	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Formyl_pep_rcpt	-	no_errors	GPR32	HGNC	ENSG00000142511	tier1	-	-	51	0	0.00	22	14	38.89
HEATR5A	0	genome.wustl.edu	37	14	31771645	31771645	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	14	31771645	31771645	G	T	SNP	HEATR5A	ENST00000389961	human	ensembl	74_37	-1	known	missense	c.5302	p.Q1768K	0.991	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	HEATR5A	HGNC	ENSG00000129493	tier1	-	-	66	0	0.00	68	4	5.56
HK2	0	genome.wustl.edu	37	2	75094808	75094808	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	75094808	75094808	G	A	SNP	HK2	ENST00000290573	human	ensembl	74_37	+1	known	missense	c.272	p.R91H	1.000	pfam_Hexokinase_N	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HK2	HGNC	ENSG00000159399	tier1	-	-	107	0	0.00	81	13	13.54
HPSE2	0	genome.wustl.edu	37	10	100503680	100503680	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	10	100503680	100503680	G	A	SNP	HPSE2	ENST00000370552	human	ensembl	74_37	-1	known	silent	c.744	p.S248	0.697	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_79,superfamily_Glycoside_hydrolase_SF	-	no_errors	HPSE2	HGNC	ENSG00000172987	tier1	-	-	65	0	0.00	51	27	34.62
HUWE1	0	genome.wustl.edu	37	X	53602169	53602169	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	X	53602169	53602169	C	T	SNP	HUWE1	ENST00000262854	human	ensembl	74_37	-1	known	missense	c.6043	p.A2015T	1.000	NULL	pfam_E3_Ub_ligase_DUF913,pfam_HECT,pfam_E3_Ub_ligase_DUF908,pfam_WWE-dom,pfam_UBA/Ts_N,superfamily_HECT,superfamily_UBA-like,superfamily_ARM-type_fold,smart_UBA/transl_elong_EF1B_N_euk,smart_HECT,pfscan_HECT,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_WWE-dom	-	no_errors	HUWE1	HGNC	ENSG00000086758	tier1	-	-	64	0	0.00	52	5	8.77
IGSF21	0	genome.wustl.edu	37	1	18661448	18661448	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	18661448	18661448	G	A	SNP	IGSF21	ENST00000251296	human	ensembl	74_37	+1	known	missense	c.368	p.R123H	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	IGSF21	HGNC	ENSG00000117154	tier1	-	-	54	0	0.00	38	6	13.64
ISG20L2	0	genome.wustl.edu	37	1	156697415	156697415	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	156697415	156697415	A	C	SNP	ISG20L2	ENST00000313146	human	ensembl	74_37	-1	known	missense	c.30	p.F10L	0.971	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	ISG20L2	HGNC	ENSG00000143319				69	0	0.00	76	4	5.00
ITGA6	0	genome.wustl.edu	37	2	173368930	173368931	+	Frame_Shift_Ins	INS	-	-	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	173368930	173368931	-	A	INS	ITGA6	ENST00000264106	human	ensembl	74_37	+1	known	frame_shift_ins	c.3343_3344	p.Q1118fs	1.000:1.000	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA6	HGNC	ENSG00000091409	tier1			36	0	0.00	17	15	46.88
KCNB2	0	genome.wustl.edu	37	8	73480108	73480108	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	8	73480108	73480108	G	T	SNP	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	nonsense	c.139	p.E47*	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv9	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674	tier1	-	-	75	0	0.00	63	31	32.63
KEAP1	0	genome.wustl.edu	37	19	10610187	10610187	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	19	10610187	10610187	G	C	SNP	KEAP1	ENST00000171111	human	ensembl	74_37	-1	known	missense	c.523	p.L175V	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KEAP1	HGNC	ENSG00000079999				23	0	0.00	38	2	5.00
KLHL24	0	genome.wustl.edu	37	3	183381293	183381293	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	3	183381293	183381293	G	A	SNP	KLHL24	ENST00000242810	human	ensembl	74_37	+1	known	missense	c.968	p.R323Q	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL24	HGNC	ENSG00000114796	tier1	-	-	112	0	0.00	93	50	34.97
KPNA6	0	genome.wustl.edu	37	1	32622990	32622990	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	32622990	32622990	A	G	SNP	KPNA6	ENST00000545542	human	ensembl	74_37	+1	known	missense	c.290	p.D97G	1.000	pfam_Importin-a_IBB,superfamily_ARM-type_fold	pfam_Armadillo,pfam_Importin-a_IBB,pfam_HEAT,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA6	HGNC	ENSG00000025800	tier1	-	-	101	0	0.00	61	4	6.15
KRAS	0	genome.wustl.edu	37	12	25398284	25398284	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	12	25398284	25398284	C	T	SNP	KRAS	ENST00000256078	human	ensembl	74_37	-1	known	missense	c.35	p.G12D	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	KRAS	HGNC	ENSG00000133703	tier1	rs121913529	-	59	0	0.00	52	20	27.78
LCE3E	0	genome.wustl.edu	37	1	152538409	152538409	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	152538409	152538409	G	T	SNP	LCE3E	ENST00000368789	human	ensembl	74_37	-1	known	nonsense	c.276	p.C92*	0.984	NULL	NULL	-	no_errors	LCE3E	HGNC	ENSG00000185966	tier1	-	-	81	0	0.00	73	22	23.16
LEMD2	0	genome.wustl.edu	37	6	33746063	33746063	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	6	33746063	33746063	C	T	SNP	LEMD2	ENST00000293760	human	ensembl	74_37	-1	known	missense	c.1112	p.R371Q	0.997	pfam_Inner-Nucl-membr_MAN1	pfam_Inner-Nucl-membr_MAN1,pfam_LEM_dom,superfamily_LEM/LEM-like_dom,smart_LEM_dom,pfscan_LEM_dom	-	no_errors	LEMD2	HGNC	ENSG00000161904	tier1	-	-	61	0	0.00	62	4	5.97
LGI1	0	genome.wustl.edu	37	10	95518113	95518113	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	10	95518113	95518113	C	T	SNP	LGI1	ENST00000371418	human	ensembl	74_37	+1	known	missense	c.212	p.S71L	1.000	NULL	pfam_EPTP,pfam_Leu-rich_rpt,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_EAR	-	no_errors	LGI1	HGNC	ENSG00000108231				82	0	0.00	50	4	7.41
LINC00933	0	genome.wustl.edu	37	15	85121557	85121557	+	RNA	DEL	A	A	-			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	15	85121557	85121557	A	0	DEL	LINC00933	ENST00000557887	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	LINC00933	HGNC	ENSG00000259728				8	0	0.00	4	3	42.86
LRIG1	0	genome.wustl.edu	37	3	66444597	66444597	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	3	66444597	66444597	G	A	SNP	LRIG1	ENST00000273261	human	ensembl	74_37	-1	known	silent	c.1335	p.D445	1.000	smart_Cys-rich_flank_reg_C	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Cys-rich_flank_reg_C,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG1	HGNC	ENSG00000144749				55	0	0.00	76	4	5.00
LRRC19	0	genome.wustl.edu	37	9	26996481	26996481	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	9	26996481	26996481	G	A	SNP	LRRC19	ENST00000380055	human	ensembl	74_37	-1	known	silent	c.612	p.T204	0.896	smart_Cys-rich_flank_reg_C	smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC19	HGNC	ENSG00000184434	tier1	-	-	75	0	0.00	76	4	5.00
LRRC63	0	genome.wustl.edu	37	13	46844610	46844610	+	Silent	SNP	T	T	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	13	46844610	46844610	T	A	SNP	LRRC63	ENST00000446175	human	ensembl	74_37	+1	known	silent	c.1599	p.S533	0.977	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC63	HGNC	ENSG00000173988	tier1	-	-	30	0	0.00	39	7	15.22
LRRC8A	0	genome.wustl.edu	37	9	131670056	131670056	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	9	131670056	131670056	G	A	SNP	LRRC8A	ENST00000259324	human	ensembl	74_37	+1	known	missense	c.613	p.V205M	1.000	NULL	pfam_LRR_protein-8_N,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC8A	HGNC	ENSG00000136802	tier1	-	-	39	0	0.00	21	9	30.00
LTBP2	0	genome.wustl.edu	37	14	75052601	75052601	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	14	75052601	75052601	C	T	SNP	LTBP2	ENST00000261978	human	ensembl	74_37	-1	known	silent	c.786	p.P262	0.000	NULL	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP2	HGNC	ENSG00000119681	tier1	-	-	116	0	0.00	82	5	5.75
LTK	0	genome.wustl.edu	37	15	41803369	41803371	+	In_Frame_Del	DEL	GCC	GCC	-			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	GCC	GCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	15	41803369	41803371	GCC	-	DEL	LTK	ENST00000263800	human	ensembl	74_37	-1	known	in_frame_del	c.990_988	p.G330in_frame_del	1.000:1.000:1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LTK	HGNC	ENSG00000062524	tier1			73	0	0.00	33	2	5.71
LTK	0	genome.wustl.edu	37	15	41804982	41804982	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	15	41804982	41804982	G	T	SNP	LTK	ENST00000263800	human	ensembl	74_37	-1	known	missense	c.282	p.S94R	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	LTK	HGNC	ENSG00000062524				124	0	0.00	74	4	5.13
MAB21L1	0	genome.wustl.edu	37	13	36049601	36049601	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	13	36049601	36049601	C	T	SNP	MAB21L1	ENST00000379919	human	ensembl	74_37	-1	known	silent	c.675	p.A225	0.877	pfam_Mab-21_dom	pfam_Mab-21_dom	-	no_errors	MAB21L1	HGNC	ENSG00000180660	tier1	-	-	23	0	0.00	12	18	60.00
MAGEC1	0	genome.wustl.edu	37	X	140995192	140995192	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	X	140995192	140995192	G	C	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	missense	c.2002	p.E668Q	0.918	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	tier1	-	-	43	0	0.00	37	19	33.93
MCMDC2	0	genome.wustl.edu	37	8	67803140	67803140	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	8	67803140	67803140	C	T	SNP	MCMDC2	ENST00000422365	human	ensembl	74_37	+1	known	missense	c.1114	p.R372C	0.999	smart_MCM_DNA-dep_ATPase	pfam_MCM_DNA-dep_ATPase,superfamily_NA-bd_OB-fold,superfamily_P-loop_NTPase,smart_MCM_DNA-dep_ATPase	-	no_errors	MCMDC2	HGNC	ENSG00000178460	tier1	-	-	119	0	0.00	67	46	40.71
MIR3156-3	0	genome.wustl.edu	37	21	14778723	14778723	+	RNA	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	21	14778723	14778723	G	T	SNP	MIR3156-3	ENST00000580304	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	MIR3156-3	HGNC	ENSG00000266211	tier1	-	-	47	0	0.00	49	11	18.33
MRC2	0	genome.wustl.edu	37	17	60741944	60741944	+	Nonsense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	60741944	60741944	C	T	SNP	MRC2	ENST00000303375	human	ensembl	74_37	+1	known	nonsense	c.154	p.Q52*	0.804	superfamily_Ricin_B_lectin,smart_Ricin_B_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin,prints_AntifreezeII	-	no_errors	MRC2	HGNC	ENSG00000011028	tier1	-	-	60	0	0.00	42	4	8.70
MRPL54	0	genome.wustl.edu	37	19	3765204	3765204	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	19	3765204	3765204	C	T	SNP	MRPL54	ENST00000330133	human	ensembl	74_37	+1	known	silent	c.159	p.S53	0.000	NULL	pfam_Ribosomal_L37_mit	-	no_errors	MRPL54	HGNC	ENSG00000183617	tier1	-	-	47	0	0.00	52	4	7.14
MS4A10	0	genome.wustl.edu	37	11	60557950	60557950	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	60557950	60557950	G	T	SNP	MS4A10	ENST00000308287	human	ensembl	74_37	+1	known	nonsense	c.142	p.E48*	0.002	NULL	pfam_CD20-like	-	no_errors	MS4A10	HGNC	ENSG00000172689				60	0	0.00	44	3	6.38
MT-ND5	0	genome.wustl.edu	37	MT	12904	12904	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	MT	12904	12904	A	G	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.568	p.I190V	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1	-	-	18	0	0.00	7	2	22.22
NAV3	0	genome.wustl.edu	37	12	78444920	78444920	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	12	78444920	78444920	A	G	SNP	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	missense	c.2509	p.N837D	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798	tier1	-	-	48	0	0.00	47	4	7.84
NCAM2	0	genome.wustl.edu	37	21	22849776	22849776	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	21	22849776	22849776	G	A	SNP	NCAM2	ENST00000400546	human	ensembl	74_37	+1	known	silent	c.2061	p.K687	0.942	superfamily_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom,prints_Neural_cell_adh	-	no_errors	NCAM2	HGNC	ENSG00000154654	tier1	-	-	78	0	0.00	57	4	6.56
NEK5	0	genome.wustl.edu	37	13	52661570	52661570	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	13	52661570	52661570	G	A	SNP	NEK5	ENST00000355568	human	ensembl	74_37	-1	known	silent	c.1296	p.A432	0.975	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK5	HGNC	ENSG00000197168	tier1	-	-	92	0	0.00	68	66	49.25
NFXL1	0	genome.wustl.edu	37	4	47900808	47900808	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	4	47900808	47900808	C	T	SNP	NFXL1	ENST00000381538	human	ensembl	74_37	-1	known	missense	c.1055	p.R352K	1.000	NULL	pfam_Znf_NFX1,smart_Znf_NFX1,pfscan_Znf_RING	-	no_errors	NFXL1	HGNC	ENSG00000170448	tier1	-	-	81	0	0.00	25	34	57.63
NLE1	0	genome.wustl.edu	37	17	33464163	33464163	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	33464163	33464163	G	A	SNP	NLE1	ENST00000442241	human	ensembl	74_37	-1	known	missense	c.685	p.R229W	0.995	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,pfam_NLE,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep,prints_Gprotein_B	-	no_errors	NLE1	HGNC	ENSG00000073536	tier1	-	-	71	0	0.00	29	12	29.27
NLRP3	0	genome.wustl.edu	37	1	247587419	247587420	+	Frame_Shift_Ins	INS	-	-	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	247587419	247587420	-	G	INS	NLRP3	ENST00000336119	human	ensembl	74_37	+1	known	frame_shift_ins	c.674_675	p.A227fs	1.000:1.000	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP3	HGNC	ENSG00000162711	tier1			50	0	0.00	30	2	6.25
NOD2	0	genome.wustl.edu	37	16	50745944	50745944	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	16	50745944	50745944	C	T	SNP	NOD2	ENST00000300589	human	ensembl	74_37	+1	known	missense	c.2122	p.R708C	0.017	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NOD2	HGNC	ENSG00000167207	tier1	-	-	51	0	0.00	41	36	46.75
NOX3	0	genome.wustl.edu	37	6	155751997	155751997	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	6	155751997	155751997	G	T	SNP	NOX3	ENST00000159060	human	ensembl	74_37	-1	known	missense	c.871	p.Q291K	1.000	superfamily_Riboflavin_synthase-like_b-brl	pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	NOX3	HGNC	ENSG00000074771				27	0	0.00	31	2	5.88
NPNT	0	genome.wustl.edu	37	4	106816881	106816881	+	Splice_Site	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	4	106816881	106816881	G	T	SNP	NPNT	ENST00000379987	human	ensembl	74_37	+1	known	splice_site	c.71+1	e1+1	0.998	-	-	-	no_errors	NPNT	HGNC	ENSG00000168743	tier1	-	-	168	0	0.00	44	50	53.19
NR1D2	0	genome.wustl.edu	37	3	24009343	24009343	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	3	24009343	24009343	G	C	SNP	NR1D2	ENST00000312521	human	ensembl	74_37	+1	known	missense	c.1372	p.E458Q	1.000	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR1D2	HGNC	ENSG00000174738	tier1	-	-	52	0	0.00	40	20	33.33
NTM	0	genome.wustl.edu	37	11	132206283	132206284	+	RNA	DEL	AA	AA	-			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	132206283	132206284	AA	-	DEL	NTM	ENST00000474900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.023:0.070	-	-	-	no_errors	NTM	HGNC	ENSG00000182667	tier1			21	0	0.00	17	3	15.00
NUP153	0	genome.wustl.edu	37	6	17629214	17629214	+	Missense_Mutation	SNP	T	T	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	6	17629214	17629214	T	G	SNP	NUP153	ENST00000537253	human	ensembl	74_37	-1	known	missense	c.3309	p.K1103N	0.973	NULL	pfam_Nucleoporin_Nup153,pfam_Znf_RanBP2,pfam_Retro-transposon_transp_CS,smart_Znf_RanBP2,pfscan_Znf_RanBP2	-	no_errors	NUP153	HGNC	ENSG00000124789	tier1	-	-	73	0	0.00	31	20	39.22
OCSTAMP	0	genome.wustl.edu	37	20	45170430	45170430	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	20	45170430	45170430	C	T	SNP	OCSTAMP	ENST00000279028	human	ensembl	74_37	-1	known	missense	c.1184	p.R395Q	0.004	pfam_DC_STAMP-like	pfam_DC_STAMP-like	-	no_errors	OCSTAMP	HGNC	ENSG00000149635				27	0	0.00	22	5	18.52
OR13C4	0	genome.wustl.edu	37	9	107289070	107289070	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	9	107289070	107289070	A	G	SNP	OR13C4	ENST00000277216	human	ensembl	74_37	-1	known	missense	c.421	p.Y141H	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR13C4	HGNC	ENSG00000148136	tier1	-	-	40	0	0.00	40	22	35.48
OSMR	0	genome.wustl.edu	37	5	38933248	38933248	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	5	38933248	38933248	C	T	SNP	OSMR	ENST00000274276	human	ensembl	74_37	+1	known	missense	c.2642	p.P881L	0.000	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	OSMR	HGNC	ENSG00000145623	tier1	-	-	64	0	0.00	21	51	70.83
PAX4	0	genome.wustl.edu	37	7	127253852	127253852	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	7	127253852	127253852	G	A	SNP	PAX4	ENST00000341640	human	ensembl	74_37	-1	known	missense	c.496	p.R166W	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Paired_dom,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Paired_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX4	HGNC	ENSG00000106331	tier1	-	-	65	0	0.00	74	25	25.25
PCGF1	0	genome.wustl.edu	37	2	74733931	74733931	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	74733931	74733931	G	T	SNP	PCGF1	ENST00000233630	human	ensembl	74_37	-1	known	missense	c.280	p.P94T	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PCGF1	HGNC	ENSG00000115289				90	0	0.00	72	4	5.26
PCSK5	0	genome.wustl.edu	37	9	78853891	78853891	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	9	78853891	78853891	G	T	SNP	PCSK5	ENST00000545128	human	ensembl	74_37	+1	known	missense	c.2883	p.E961D	0.110	superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Growth_fac_rcpt_N_dom,superfamily_Prot_inh_propept,smart_Furin_repeat,smart_EG-like_dom,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK5	HGNC	ENSG00000099139	tier1	-	-	55	0	0.00	55	4	6.78
PDE3B	0	genome.wustl.edu	37	11	14880604	14880604	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	14880604	14880604	G	T	SNP	PDE3B	ENST00000282096	human	ensembl	74_37	+1	known	missense	c.2536	p.D846Y	1.000	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	pfam_PDEase_catalytic_dom,smart_HD/PDEase_dom	-	no_errors	PDE3B	HGNC	ENSG00000152270	tier1	-	-	76	0	0.00	51	28	35.44
PDSS1	0	genome.wustl.edu	37	10	26986739	26986739	+	Silent	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	10	26986739	26986739	G	T	SNP	PDSS1	ENST00000376215	human	ensembl	74_37	+1	known	silent	c.99	p.G33	0.000	NULL	pfam_Polyprenyl_synt,superfamily_Terpenoid_synth	-	no_errors	PDSS1	HGNC	ENSG00000148459				22	0	0.00	10	4	28.57
PDSS1	0	genome.wustl.edu	37	10	26986740	26986740	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	10	26986740	26986740	C	T	SNP	PDSS1	ENST00000376215	human	ensembl	74_37	+1	known	missense	c.100	p.P34S	0.000	NULL	pfam_Polyprenyl_synt,superfamily_Terpenoid_synth	-	no_errors	PDSS1	HGNC	ENSG00000148459				22	0	0.00	10	4	28.57
PER2	0	genome.wustl.edu	37	2	239157804	239157804	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	239157804	239157804	G	T	SNP	PER2	ENST00000254657	human	ensembl	74_37	-1	known	missense	c.3517	p.Q1173K	1.000	pfam_Period_circadian-like_C	pfam_Period_circadian-like_C,pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,smart_PAS,pfscan_PAS	-	no_errors	PER2	HGNC	ENSG00000132326				58	0	0.00	45	4	8.16
PES1	0	genome.wustl.edu	37	22	30975882	30975882	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	22	30975882	30975882	C	A	SNP	PES1	ENST00000354694	human	ensembl	74_37	-1	known	missense	c.1210	p.A404S	1.000	superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	pfam_Pescadillo,pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	PES1	HGNC	ENSG00000100029	tier1	-	-	62	0	0.00	41	31	43.06
PLXNA4	0	genome.wustl.edu	37	7	131831446	131831446	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	7	131831446	131831446	C	T	SNP	PLXNA4	ENST00000321063	human	ensembl	74_37	-1	known	silent	c.4878	p.R1626	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA4	HGNC	ENSG00000221866	tier1	-	-	72	0	0.00	70	5	6.67
POLR1B	0	genome.wustl.edu	37	2	113325658	113325658	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	113325658	113325658	C	T	SNP	POLR1B	ENST00000541869	human	ensembl	74_37	+1	known	missense	c.1975	p.R659W	0.860	pfam_RNA_pol_Rpa2-specific	pfam_DNA-dir_RNA_pol_su2_6,pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_3,pfam_RNA_pol_Rpb2_7,pfam_RNA_pol_Rpa2-specific,pfam_RNA_pol_Rpb2_2,pfam_RNA_pol_Rpb2_5	-	no_errors	POLR1B	HGNC	ENSG00000125630	tier1	-	-	83	0	0.00	56	4	6.67
PPEF2	0	genome.wustl.edu	37	4	76785642	76785642	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	4	76785642	76785642	G	A	SNP	PPEF2	ENST00000286719	human	ensembl	74_37	-1	known	silent	c.1959	p.N653	1.000	pirsf_Ser/Thr-Pase_EF-hand_contain,pfscan_EF_hand_dom	pirsf_Ser/Thr-Pase_EF-hand_contain,pfam_PEstase_dom,pfam_PPP_dom,smart_Ser/Thr-sp_prot-phosphatase,smart_EF_hand_dom,prints_Ser/Thr-sp_prot-phosphatase,pfscan_EF_hand_dom	-	no_errors	PPEF2	HGNC	ENSG00000156194	tier1	-	-	60	0	0.00	73	4	5.19
PPP1R12B	0	genome.wustl.edu	37	1	202407190	202407190	+	Frame_Shift_Del	DEL	T	T	-			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	202407190	202407190	T	-	DEL	PPP1R12B	ENST00000480184	human	ensembl	74_37	+1	novel	frame_shift_del	c.1496	p.F502fs	0.041	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	PPP1R12B	HGNC	ENSG00000077157	tier1			50	0	0.00	34	3	8.11
PPP1R16B	0	genome.wustl.edu	37	20	37531431	37531431	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	20	37531431	37531431	C	T	SNP	PPP1R16B	ENST00000299824	human	ensembl	74_37	+1	known	missense	c.692	p.T231I	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R16B	HGNC	ENSG00000101445	tier1	-	-	55	0	0.00	33	18	35.29
PPP2R5C	0	genome.wustl.edu	37	14	102360876	102360876	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	14	102360876	102360876	G	T	SNP	PPP2R5C	ENST00000422945	human	ensembl	74_37	+1	known	missense	c.924	p.K308N	1.000	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5C	HGNC	ENSG00000078304	tier1	-	-	71	0	0.00	68	4	5.56
PQBP1	0	genome.wustl.edu	37	X	48755853	48755853	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	X	48755853	48755853	G	A	SNP	PQBP1	ENST00000218224	human	ensembl	74_37	+1	known	missense	c.61	p.E21K	1.000	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	PQBP1	HGNC	ENSG00000102103	tier1	-	-	29	0	0.00	7	8	53.33
PRAMEF1	0	genome.wustl.edu	37	1	12855915	12855915	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	12855915	12855915	C	T	SNP	PRAMEF1	ENST00000332296	human	ensembl	74_37	+1	known	missense	c.1195	p.R399C	0.012	NULL	NULL	-	no_errors	PRAMEF1	HGNC	ENSG00000116721				327	0	0.00	415	22	5.02
PRAMEF2	0	genome.wustl.edu	37	1	12921404	12921404	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	12921404	12921404	C	T	SNP	PRAMEF2	ENST00000240189	human	ensembl	74_37	+1	known	missense	c.1195	p.R399C	0.003	NULL	NULL	-	no_errors	PRAMEF2	HGNC	ENSG00000120952	tier1	-	-	304	0	0.00	254	46	15.28
PRDM16	0	genome.wustl.edu	37	1	3329152	3329152	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	3329152	3329152	C	T	SNP	PRDM16	ENST00000270722	human	ensembl	74_37	+1	known	silent	c.2391	p.S797	0.016	NULL	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM16	HGNC	ENSG00000142611	tier1	-	-	137	0	0.00	74	53	41.73
PRKAB1	0	genome.wustl.edu	37	12	120114351	120114351	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	12	120114351	120114351	G	A	SNP	PRKAB1	ENST00000229328	human	ensembl	74_37	+1	known	missense	c.542	p.S181N	1.000	NULL	pfam_AMP_prot_kin_bsu_interact-dom,superfamily_Ig_E-set	-	no_errors	PRKAB1	HGNC	ENSG00000111725	tier1	-	-	100	0	0.00	68	33	32.67
PRMT5	0	genome.wustl.edu	37	14	23394147	23394147	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	14	23394147	23394147	G	A	SNP	PRMT5	ENST00000324366	human	ensembl	74_37	-1	known	missense	c.880	p.P294S	1.000	pfam_Arg_MeTrfase,pirsf_Arg_MeTrfase_PRMT5	pfam_Arg_MeTrfase,pirsf_Arg_MeTrfase_PRMT5	-	no_errors	PRMT5	HGNC	ENSG00000100462	tier1	-	-	93	0	0.00	87	21	19.44
PSMD3	0	genome.wustl.edu	37	17	38153633	38153634	+	Frame_Shift_Ins	INS	-	-	GTAA			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	38153633	38153634	-	GTAA	INS	PSMD3	ENST00000264639	human	ensembl	74_37	+1	known	frame_shift_ins	c.1527_1528	p.E509fs	1.000:1.000	pfam_26S_Psome_reg_C	pfam_26S_Psome_reg_C,pfam_PCI_dom,smart_PAM,smart_PCI_dom	-	no_errors	PSMD3	HGNC	ENSG00000108344	tier1			67	0	0.00	78	10	11.36
PSTPIP2	0	genome.wustl.edu	37	18	43585474	43585474	+	Silent	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	18	43585474	43585474	G	T	SNP	PSTPIP2	ENST00000409746	human	ensembl	74_37	-1	known	silent	c.378	p.I126	0.041	NULL	pfam_FCH_dom,smart_FCH_dom,pfscan_FCH_dom	-	no_errors	PSTPIP2	HGNC	ENSG00000152229				53	0	0.00	23	2	8.00
PTPN13	0	genome.wustl.edu	37	4	87691018	87691018	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	4	87691018	87691018	G	A	SNP	PTPN13	ENST00000436978	human	ensembl	74_37	+1	known	missense	c.4601	p.S1534N	1.000	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,superfamily_PAZ_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN13	HGNC	ENSG00000163629	tier1	-	-	119	0	0.00	73	4	5.19
PTPRC	0	genome.wustl.edu	37	1	198687284	198687284	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	198687284	198687284	G	T	SNP	PTPRC	ENST00000442510	human	ensembl	74_37	+1	known	missense	c.1512	p.K504N	0.000	pirsf_Leukocyte_common_ag,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Leukocyte_common_ag,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Leukocyte_common_ag,pfam_PTP_recept_N,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRC	HGNC	ENSG00000081237	tier1	-	-	75	0	0.00	64	4	5.88
RAB10	0	genome.wustl.edu	37	2	26350735	26350735	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	26350735	26350735	G	A	SNP	RAB10	ENST00000264710	human	ensembl	74_37	+1	known	missense	c.434	p.G145D	1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB10	HGNC	ENSG00000084733	tier1	-	-	88	0	0.00	69	4	5.48
RAB25	0	genome.wustl.edu	37	1	156038211	156038211	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	156038211	156038211	C	T	SNP	RAB25	ENST00000361084	human	ensembl	74_37	+1	known	silent	c.390	p.S130	1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB25	HGNC	ENSG00000132698				60	0	0.00	75	4	5.06
RAP1GAP	0	genome.wustl.edu	37	1	21978179	21978179	+	RNA	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	21978179	21978179	C	T	SNP	RAP1GAP	ENST00000374757	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	RAP1GAP	HGNC	ENSG00000076864	tier1	-	-	75	0	0.00	30	4	11.76
RBM19	0	genome.wustl.edu	37	12	114356243	114356243	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	12	114356243	114356243	C	T	SNP	RBM19	ENST00000261741	human	ensembl	74_37	-1	known	missense	c.2395	p.V799M	0.989	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom	-	no_errors	RBM19	HGNC	ENSG00000122965	tier1	-	-	35	0	0.00	44	7	13.73
RBM34	0	genome.wustl.edu	37	1	235318216	235318216	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	235318216	235318216	G	A	SNP	RBM34	ENST00000408888	human	ensembl	74_37	-1	known	missense	c.577	p.P193S	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM34	HGNC	ENSG00000188739	tier1	-	-	111	0	0.00	94	5	5.05
RGS12	0	genome.wustl.edu	37	4	3422409	3422409	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	4	3422409	3422409	G	A	SNP	RGS12	ENST00000344733	human	ensembl	74_37	+1	known	silent	c.2802	p.S934	0.185	NULL	pfam_Raf-like_ras-bd,pfam_RGS_dom,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTB/PI_dom,smart_Regulat_G_prot_signal_superfam,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTB/PI_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS12	HGNC	ENSG00000159788	tier1	-	-	55	0	0.00	30	4	11.76
RGSL1	0	genome.wustl.edu	37	1	182443379	182443379	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	182443379	182443379	C	T	SNP	RGSL1	ENST00000294854	human	ensembl	74_37	+1	known	missense	c.1133	p.A378V	0.000	superfamily_Regulat_G_prot_signal_superfam	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam	-	no_errors	RGSL1	HGNC	ENSG00000121446				57	0	0.00	42	3	6.67
RIMS2	0	genome.wustl.edu	37	8	104897914	104897914	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	8	104897914	104897914	C	T	SNP	RIMS2	ENST00000406091	human	ensembl	74_37	+1	known	missense	c.1087	p.R363W	0.443	NULL	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406	tier1	-	-	69	0	0.00	53	4	7.02
RPRML	0	genome.wustl.edu	37	17	45056320	45056320	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	45056320	45056320	G	A	SNP	RPRML	ENST00000322329	human	ensembl	74_37	-1	known	silent	c.54	p.G18	0.388	NULL	NULL	-	no_errors	RPRML	HGNC	ENSG00000179673	tier1	-	-	20	0	0.00	15	12	44.44
SALL3	0	genome.wustl.edu	37	18	76753955	76753955	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	18	76753955	76753955	C	T	SNP	SALL3	ENST00000537592	human	ensembl	74_37	+1	known	missense	c.1964	p.S655L	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL3	HGNC	ENSG00000256463	tier1	-	-	34	0	0.00	6	6	50.00
SCIMP	0	genome.wustl.edu	37	17	5126688	5126688	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	5126688	5126688	C	T	SNP	SCIMP	ENST00000574081	human	ensembl	74_37	-1	known	missense	c.85	p.V29I	0.000	NULL	NULL	-	no_errors	SCIMP	HGNC	ENSG00000161929				84	0	0.00	54	4	6.90
SDK1	0	genome.wustl.edu	37	7	4056815	4056815	+	Silent	SNP	T	T	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	7	4056815	4056815	T	A	SNP	SDK1	ENST00000404826	human	ensembl	74_37	+1	known	silent	c.2433	p.A811	0.079	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK1	HGNC	ENSG00000146555	tier1	-	-	90	0	0.00	70	4	5.41
SEMA3E	0	genome.wustl.edu	37	7	83026033	83026033	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	7	83026033	83026033	A	T	SNP	SEMA3E	ENST00000307792	human	ensembl	74_37	-1	known	missense	c.1379	p.V460E	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3E	HGNC	ENSG00000170381	tier1	-	-	54	0	0.00	56	4	6.67
SEMA6A	0	genome.wustl.edu	37	5	115782665	115782665	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	5	115782665	115782665	C	T	SNP	SEMA6A	ENST00000257414	human	ensembl	74_37	-1	known	missense	c.2788	p.G930R	0.993	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6A	HGNC	ENSG00000092421	tier1	-	-	72	0	0.00	31	24	43.64
SENP3	0	genome.wustl.edu	37	17	7468306	7468306	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	7468306	7468306	G	T	SNP	SENP3	ENST00000429205	human	ensembl	74_37	+1	known	missense	c.986	p.G329V	1.000	NULL	pfam_Peptidase_C48,pfscan_Peptidase_C48	-	no_errors	SENP3	HGNC	ENSG00000161956	tier1	-	-	60	0	0.00	44	4	8.33
SERPINF1	0	genome.wustl.edu	37	17	1674367	1674367	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	1674367	1674367	T	A	SNP	SERPINF1	ENST00000254722	human	ensembl	74_37	+1	known	missense	c.328	p.Y110N	1.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINF1	HGNC	ENSG00000132386	tier1	-	-	80	0	0.00	72	4	5.26
SEZ6L	0	genome.wustl.edu	37	22	26688433	26688433	+	Silent	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	22	26688433	26688433	G	T	SNP	SEZ6L	ENST00000248933	human	ensembl	74_37	+1	known	silent	c.156	p.P52	0.002	NULL	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	SEZ6L	HGNC	ENSG00000100095	tier1	-	-	60	0	0.00	73	4	5.19
SGCD	0	genome.wustl.edu	37	5	156186335	156186335	+	Silent	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	5	156186335	156186335	G	T	SNP	SGCD	ENST00000337851	human	ensembl	74_37	+1	known	silent	c.807	p.G269	1.000	pfam_Sarcoglycan	pfam_Sarcoglycan	-	no_errors	SGCD	HGNC	ENSG00000170624				52	0	0.00	33	2	5.71
SHROOM3	0	genome.wustl.edu	37	4	77677900	77677900	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	4	77677900	77677900	G	T	SNP	SHROOM3	ENST00000296043	human	ensembl	74_37	+1	known	missense	c.5008	p.A1670S	0.993	NULL	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771				65	0	0.00	57	4	6.56
SLC22A10	0	genome.wustl.edu	37	11	63066469	63066469	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	63066469	63066469	C	T	SNP	SLC22A10	ENST00000332793	human	ensembl	74_37	+1	known	missense	c.908	p.A303V	0.992	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A10	HGNC	ENSG00000184999				79	0	0.00	59	4	6.35
SLC29A1	0	genome.wustl.edu	37	6	44189380	44189380	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	6	44189380	44189380	G	T	SNP	SLC29A1	ENST00000313248	human	ensembl	74_37	+1	known	missense	c.144	p.E48D	0.003	NULL	pfam_Eqnu_transpt,superfamily_MFS_dom_general_subst_transpt,prints_Eqnu_transpt,tigrfam_Eqnu_transpt	-	no_errors	SLC29A1	HGNC	ENSG00000112759	tier1	-	-	32	0	0.00	41	4	8.89
SMAD5	0	genome.wustl.edu	37	5	135514032	135514032	+	RNA	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	5	135514032	135514032	C	T	SNP	SMAD5	ENST00000514641	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.996	-	-	-	no_errors	SMAD5	HGNC	ENSG00000113658	tier1	-	-	75	0	0.00	67	4	5.63
SMARCB1	0	genome.wustl.edu	37	22	24175848	24175848	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	22	24175848	24175848	C	T	SNP	SMARCB1	ENST00000263121	human	ensembl	74_37	+1	known	missense	c.1076	p.A359V	0.996	pfam_SNF5,pirsf_SWI_SNF_chromatin_remodel_cplx	pfam_SNF5,pirsf_SWI_SNF_chromatin_remodel_cplx	-	no_errors	SMARCB1	HGNC	ENSG00000099956	tier1	-	-	38	0	0.00	54	4	6.90
SNORA53	0	genome.wustl.edu	37	12	98993464	98993464	+	RNA	SNP	C	C	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	12	98993464	98993464	C	A	SNP	SNORA53	ENST00000391141	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	SNORA53	HGNC	ENSG00000212443	tier1	-	-	120	0	0.00	88	5	5.38
SNTG2	0	genome.wustl.edu	37	2	1241751	1241751	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	1241751	1241751	G	A	SNP	SNTG2	ENST00000308624	human	ensembl	74_37	+1	known	missense	c.811	p.A271T	0.097	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SNTG2	HGNC	ENSG00000172554	tier1	-	-	57	0	0.00	30	4	11.76
SNX9	0	genome.wustl.edu	37	6	158363834	158363834	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	6	158363834	158363834	G	T	SNP	SNX9	ENST00000392185	human	ensembl	74_37	+1	known	missense	c.1752	p.K584N	1.000	pfam_Sorting_nexin_WASP-bd-dom,pirsf_Snx9	pfam_Sorting_nexin_WASP-bd-dom,pfam_Phox,pfam_SH3_domain,pfam_SH3_2,superfamily_Phox,superfamily_SH3_domain,smart_SH3_domain,smart_Phox,pirsf_Snx9,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SNX9	HGNC	ENSG00000130340				56	0	0.00	70	4	5.41
SORL1	0	genome.wustl.edu	37	11	121475855	121475855	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	121475855	121475855	A	G	SNP	SORL1	ENST00000260197	human	ensembl	74_37	+1	known	missense	c.4685	p.Q1562R	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_LDrepeatLR_classA_rpt,pfam_Fibronectin_type3,pfam_LDLR_classB_rpt,superfamily_Fibronectin_type3,superfamily_LDrepeatLR_classA_rpt,smart_VPS10,smart_LDLR_classB_rpt,smart_LDrepeatLR_classA_rpt,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	SORL1	HGNC	ENSG00000137642	tier1	-	-	96	0	0.00	75	4	5.06
SOX1	0	genome.wustl.edu	37	13	112722424	112722424	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	13	112722424	112722424	C	T	SNP	SOX1	ENST00000330949	human	ensembl	74_37	+1	known	missense	c.452	p.A151V	1.000	pfam_TF_SOX	pfam_HMG_box_dom,pfam_TF_SOX,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX1	HGNC	ENSG00000182968	tier1	-	-	11	0	0.00	10	9	47.37
SOX10	0	genome.wustl.edu	37	22	38379482	38379482	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	22	38379482	38379482	C	T	SNP	SOX10	ENST00000360880	human	ensembl	74_37	-1	known	missense	c.310	p.V104I	1.000	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_Sox_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX10	HGNC	ENSG00000100146	tier1	-	-	147	0	0.00	117	43	26.88
SOX5	0	genome.wustl.edu	37	12	23998970	23998970	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	12	23998970	23998970	A	G	SNP	SOX5	ENST00000451604	human	ensembl	74_37	-1	known	missense	c.428	p.V143A	0.996	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX5	HGNC	ENSG00000134532	tier1	-	-	50	0	0.00	31	27	46.55
SPC25	0	genome.wustl.edu	37	2	169746017	169746017	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	169746017	169746017	C	T	SNP	SPC25	ENST00000282074	human	ensembl	74_37	-1	known	missense	c.13	p.E5K	0.581	NULL	pfam_Spc25	-	no_errors	SPC25	HGNC	ENSG00000152253				28	0	0.00	22	2	8.33
SPEF2	0	genome.wustl.edu	37	5	35727842	35727842	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	5	35727842	35727842	G	T	SNP	SPEF2	ENST00000356031	human	ensembl	74_37	+1	known	missense	c.2980	p.D994Y	0.148	NULL	pfam_DUF1042,pfam_Adenylate_kin,pfam_HATC_dom_C,superfamily_P-loop_NTPase,superfamily_CH-domain,pfscan_CH-domain	-	no_errors	SPEF2	HGNC	ENSG00000152582				45	0	0.00	69	4	5.48
SPR	0	genome.wustl.edu	37	2	73115449	73115449	+	Missense_Mutation	SNP	T	T	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	73115449	73115449	T	A	SNP	SPR	ENST00000234454	human	ensembl	74_37	+1	known	missense	c.311	p.L104H	1.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,tigrfam_Sepiapterin_red	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,tigrfam_Sepiapterin_red	-	no_errors	SPR	HGNC	ENSG00000116096				81	0	0.00	75	4	5.06
SSC5D	0	genome.wustl.edu	37	19	56011964	56011964	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	19	56011964	56011964	C	T	SNP	SSC5D	ENST00000389623	human	ensembl	74_37	+1	known	missense	c.2410	p.R804W	0.001	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	SSC5D	HGNC	ENSG00000179954	tier1	-	-	143	0	0.00	108	46	29.87
STAB1	0	genome.wustl.edu	37	3	52556952	52556952	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	3	52556952	52556952	G	A	SNP	STAB1	ENST00000321725	human	ensembl	74_37	+1	known	silent	c.6906	p.V2302	0.018	superfamily_C-type_lectin_fold,superfamily_FAS1_domain	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,smart_EG-like_dom,smart_EGF_laminin,smart_FAS1_domain,smart_EGF-like_Ca-bd_dom,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB1	HGNC	ENSG00000010327	tier1	-	-	32	0	0.00	26	4	13.33
STEAP3	0	genome.wustl.edu	37	2	120012354	120012354	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	120012354	120012354	C	T	SNP	STEAP3	ENST00000393110	human	ensembl	74_37	+1	known	missense	c.1145	p.S382F	1.000	pfam_Fe3_Rdtase_TM_dom	pfam_Fe3_Rdtase_TM_dom	-	no_errors	STEAP3	HGNC	ENSG00000115107				78	0	0.00	57	4	6.56
SYNE1	0	genome.wustl.edu	37	6	152576221	152576221	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	6	152576221	152576221	G	T	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.19264	p.L6422I	1.000	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	49	0	0.00	37	11	22.92
SYT4	0	genome.wustl.edu	37	18	40857273	40857273	+	RNA	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	18	40857273	40857273	G	A	SNP	SYT4	ENST00000586678	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SYT4	HGNC	ENSG00000132872	tier1	-	-	83	0	0.00	37	4	9.76
SZT2	0	genome.wustl.edu	37	1	43908862	43908862	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	43908862	43908862	T	C	SNP	SZT2	ENST00000562955	human	ensembl	74_37	+1	known	missense	c.8252	p.L2751P	1.000	NULL	NULL	-	no_errors	SZT2	HGNC	ENSG00000198198	tier1	-	-	77	0	0.00	73	4	5.19
TAF1	0	genome.wustl.edu	37	X	70601714	70601714	+	Silent	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	X	70601714	70601714	G	T	SNP	TAF1	ENST00000449580	human	ensembl	74_37	+1	known	silent	c.1479	p.R493	0.000	pirsf_TAF1_animal	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1	HGNC	ENSG00000147133				51	0	0.00	74	4	5.13
TAF1C	0	genome.wustl.edu	37	16	84216924	84216924	+	Missense_Mutation	SNP	A	A	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	16	84216924	84216924	A	G	SNP	TAF1C	ENST00000569505	human	ensembl	74_37	-1	known	missense	c.128	p.L43P	1.000	NULL	NULL	-	no_errors	TAF1C	HGNC	ENSG00000103168	tier1	-	-	29	0	0.00	22	16	42.11
TANK	0	genome.wustl.edu	37	2	162087607	162087607	+	Nonsense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	162087607	162087607	G	T	SNP	TANK	ENST00000259075	human	ensembl	74_37	+1	known	nonsense	c.646	p.G216*	1.000	NULL	NULL	-	no_errors	TANK	HGNC	ENSG00000136560				54	0	0.00	26	2	7.14
TATDN2	0	genome.wustl.edu	37	3	10290963	10290964	+	Frame_Shift_Ins	INS	-	-	GG			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	3	10290963	10290964	0	GG	INS	TATDN2	ENST00000287652	human	ensembl	74_37	+1	known	frame_shift_ins	c.79_80	p.E28fs	1.000:1.000	NULL	pfam_TatD_family	-	no_errors	TATDN2	HGNC	ENSG00000157014				114	0	0.00	129	9	6.52
TDRKH	0	genome.wustl.edu	37	1	151747924	151747924	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	151747924	151747924	G	T	SNP	TDRKH	ENST00000368822	human	ensembl	74_37	-1	known	missense	c.1378	p.Q460K	1.000	NULL	pfam_KH_dom_type_1,pfam_Tudor,smart_KH_dom,smart_Tudor,pfscan_Tudor,pfscan_KH_dom_type_1	-	no_errors	TDRKH	HGNC	ENSG00000182134	tier1	-	-	68	0	0.00	51	4	7.27
TIAM1	0	genome.wustl.edu	37	21	32595768	32595768	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	21	32595768	32595768	G	A	SNP	TIAM1	ENST00000286827	human	ensembl	74_37	-1	known	missense	c.1949	p.A650V	1.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Raf-like_ras-bd,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM1	HGNC	ENSG00000156299	tier1	-	-	113	0	0.00	94	5	5.05
TMPRSS4	0	genome.wustl.edu	37	11	117969749	117969749	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	11	117969749	117969749	G	T	SNP	TMPRSS4	ENST00000437212	human	ensembl	74_37	+1	known	missense	c.93	p.K31N	0.995	NULL	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,pfam_LDrepeatLR_classA_rpt,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS4	HGNC	ENSG00000137648	tier1	-	-	57	0	0.00	43	4	8.33
TMTC1	0	genome.wustl.edu	37	12	29936476	29936476	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	12	29936476	29936476	C	T	SNP	TMTC1	ENST00000539277	human	ensembl	74_37	-1	putative	missense	c.209	p.R70H	0.994	NULL	pfam_TPR_1,pfam_TPR_2,pfam_DUF1736,pfam_PIK-rel_kinase_FAT,pfam_TPR-3,smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TMTC1	HGNC	ENSG00000133687	tier1	-	-	152	0	0.00	143	59	29.06
TOMM70A	0	genome.wustl.edu	37	3	100119483	100119483	+	Missense_Mutation	SNP	G	G	C			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	3	100119483	100119483	G	C	SNP	TOMM70A	ENST00000284320	human	ensembl	74_37	-1	known	missense	c.311	p.A104G	0.855	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TOMM70A	HGNC	ENSG00000154174	tier1	-	-	121	0	0.00	81	30	27.03
TP53	0	genome.wustl.edu	37	17	7578526	7578526	+	Missense_Mutation	SNP	C	C	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	17	7578526	7578526	C	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.404	p.C135F	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	55	0	0.00	16	22	57.89
TP53TG3D	0	genome.wustl.edu	37	16	32265836	32265836	+	RNA	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	16	32265836	32265836	C	T	SNP	TP53TG3D	ENST00000564810	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.373	-	-	-	no_errors	TP53TG3D	HGNC	ENSG00000205456	tier1	-	-	150	0	0.00	126	73	36.50
TRAPPC9	0	genome.wustl.edu	37	8	140922425	140922425	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	8	140922425	140922425	T	C	SNP	TRAPPC9	ENST00000389328	human	ensembl	74_37	-1	known	missense	c.3224	p.E1075G	1.000	NULL	pfam_TRAPP_II_complex_Trs120	-	no_errors	TRAPPC9	HGNC	ENSG00000167632	tier1	-	-	78	0	0.00	81	15	15.62
TSHZ3	0	genome.wustl.edu	37	19	31770238	31770240	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	19	31770238	31770240	CTG	-	DEL	TSHZ3	ENST00000240587	human	ensembl	74_37	-1	known	in_frame_del	c.461_459	p.S157in_frame_del	1.000:1.000:1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ3	HGNC	ENSG00000121297	tier1			62	0	0.00	58	6	9.38
TSNAXIP1	0	genome.wustl.edu	37	16	67858589	67858589	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	16	67858589	67858589	G	T	SNP	TSNAXIP1	ENST00000388833	human	ensembl	74_37	+1	known	missense	c.423	p.E141D	0.997	NULL	NULL	-	no_errors	TSNAXIP1	HGNC	ENSG00000102904	tier1	-	-	71	0	0.00	64	20	23.81
TTC28	0	genome.wustl.edu	37	22	28388606	28388606	+	Missense_Mutation	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	22	28388606	28388606	G	A	SNP	TTC28	ENST00000397906	human	ensembl	74_37	-1	novel	missense	c.5522	p.A1841V	1.000	NULL	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC28	HGNC	ENSG00000100154				90	0	0.00	114	6	5.00
TTN	0	genome.wustl.edu	37	2	179447301	179447301	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	179447301	179447301	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.58178	p.A19393E	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	34	0	0.00	41	4	8.89
UBAP1	0	genome.wustl.edu	37	9	34250735	34250735	+	Missense_Mutation	SNP	T	T	C			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	9	34250735	34250735	T	C	SNP	UBAP1	ENST00000545103	human	ensembl	74_37	+1	known	missense	c.1538	p.M513T	1.000	superfamily_UBA-like	superfamily_UBA-like,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAP1	HGNC	ENSG00000165006				81	0	0.00	93	5	5.10
UBE3B	0	genome.wustl.edu	37	12	109949113	109949113	+	RNA	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	12	109949113	109949113	G	A	SNP	UBE3B	ENST00000535900	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	UBE3B	HGNC	ENSG00000151148	tier1	-	-	61	0	0.00	36	31	46.27
UQCRC2	0	genome.wustl.edu	37	16	21964747	21964747	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	16	21964747	21964747	G	T	SNP	UQCRC2	ENST00000268379	human	ensembl	74_37	+1	known	missense	c.3	p.M1I	1.000	NULL	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	UQCRC2	HGNC	ENSG00000140740				40	0	0.00	56	3	5.08
USF1	0	genome.wustl.edu	37	1	161011971	161011971	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	161011971	161011971	G	T	SNP	USF1	ENST00000368020	human	ensembl	74_37	-1	known	missense	c.211	p.L71M	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	USF1	HGNC	ENSG00000158773				73	0	0.00	61	4	6.06
USP10	0	genome.wustl.edu	37	16	84779188	84779188	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	16	84779188	84779188	C	T	SNP	USP10	ENST00000570191	human	ensembl	74_37	+1	known	silent	c.1113	p.P371	0.998	NULL	pfam_Peptidase_C19/C67,pfam_Ataxin-2_C,pfscan_Peptidase_C19/C67	-	no_errors	USP10	HGNC	ENSG00000103194	tier1	-	-	137	0	0.00	100	83	45.36
VIL1	0	genome.wustl.edu	37	2	219303392	219303392	+	Silent	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	219303392	219303392	C	T	SNP	VIL1	ENST00000248444	human	ensembl	74_37	+1	known	silent	c.2172	p.S724	0.998	NULL	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	VIL1	HGNC	ENSG00000127831	tier1	-	-	95	0	0.00	56	27	32.53
WBP1	0	genome.wustl.edu	37	2	74687409	74687410	+	Frame_Shift_Ins	INS	-	-	C			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	74687409	74687410	-	C	INS	WBP1	ENST00000233615	human	ensembl	74_37	+1	known	frame_shift_ins	c.411_412	p.Y140fs	0.119:0.993	pfam_Uncharacterised_WW-bd	pfam_Uncharacterised_WW-bd	-	no_errors	WBP1	HGNC	ENSG00000239779	tier1			122	0	0.00	74	34	31.48
WDFY4	0	genome.wustl.edu	37	10	50190923	50190924	+	RNA	INS	-	-	AA			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	10	50190923	50190924	-	AA	INS	WDFY4	ENST00000465910	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.898:0.023	-	-	-	no_errors	WDFY4	HGNC	ENSG00000128815	tier1			18	0	0.00	19	4	17.39
WDR59	0	genome.wustl.edu	37	16	74946165	74946165	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	16	74946165	74946165	G	A	SNP	WDR59	ENST00000262144	human	ensembl	74_37	-1	known	silent	c.1320	p.N440	0.969	superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,pfscan_RWD-domain	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_UBQ-conjugating_enzyme/RWD,smart_WD40_repeat,smart_RWD-domain,pfscan_RWD-domain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR59	HGNC	ENSG00000103091	tier1	-	-	48	0	0.00	85	5	5.56
XPO6	0	genome.wustl.edu	37	16	28109896	28109896	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	16	28109896	28109896	C	T	SNP	XPO6	ENST00000304658	human	ensembl	74_37	-1	known	missense	c.3341	p.C1114Y	1.000	NULL	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO6	HGNC	ENSG00000169180				51	0	0.00	68	4	5.56
XPR1	0	genome.wustl.edu	37	1	180843070	180843070	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	180843070	180843070	G	T	SNP	XPR1	ENST00000367590	human	ensembl	74_37	+1	known	missense	c.1800	p.E600D	1.000	pfam_EXS_C	pfam_EXS_C,pfam_SPX_N	-	no_errors	XPR1	HGNC	ENSG00000143324				76	0	0.00	67	4	5.63
YARS	0	genome.wustl.edu	37	1	33241585	33241585	+	Silent	SNP	G	G	A			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	33241585	33241585	G	A	SNP	YARS	ENST00000373477	human	ensembl	74_37	-1	known	silent	c.1584	p.S528	1.000	superfamily_NA-bd_OB-fold	pfam_aa-tRNA-synth_Ic,pfam_tRNA-bd_dom,superfamily_NA-bd_OB-fold,prints_Tyr-tRNA-ligase,pfscan_tRNA-bd_dom,tigrfam_Tyr-tRNA-ligase	-	no_errors	YARS	HGNC	ENSG00000134684				57	0	0.00	37	4	9.76
ZBTB12	0	genome.wustl.edu	37	6	31868356	31868357	+	Frame_Shift_Ins	INS	-	-	GT			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	6	31868356	31868357	-	GT	INS	ZBTB12	ENST00000375527	human	ensembl	74_37	-1	known	frame_shift_ins	c.727_726	p.L242fs	0.994:0.996	NULL	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB12	HGNC	ENSG00000204366	tier1			98	0	0.00	92	57	38.26
ZBTB5	0	genome.wustl.edu	37	9	37442366	37442366	+	Silent	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	9	37442366	37442366	G	T	SNP	ZBTB5	ENST00000307750	human	ensembl	74_37	-1	known	silent	c.183	p.T61	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB5	HGNC	ENSG00000168795	tier1	-	-	30	0	0.00	49	4	7.55
ZEB2	0	genome.wustl.edu	37	2	145147113	145147113	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	2	145147113	145147113	C	G	SNP	ZEB2	ENST00000303660	human	ensembl	74_37	-1	known	missense	c.3550	p.E1184Q	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZEB2	HGNC	ENSG00000169554	tier1	-	-	82	0	0.00	62	10	13.89
ZFP42	0	genome.wustl.edu	37	4	188924760	188924760	+	Missense_Mutation	SNP	C	C	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	4	188924760	188924760	C	T	SNP	ZFP42	ENST00000326866	human	ensembl	74_37	+1	known	missense	c.799	p.R267C	0.890	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFP42	HGNC	ENSG00000179059	tier1	-	-	51	0	0.00	12	11	47.83
ZFPM2	0	genome.wustl.edu	37	8	106813340	106813340	+	Missense_Mutation	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	8	106813340	106813340	G	T	SNP	ZFPM2	ENST00000407775	human	ensembl	74_37	+1	known	missense	c.1030	p.A344S	1.000	smart_Znf_C2H2-like	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZFPM2	HGNC	ENSG00000169946	tier1	-	-	86	0	0.00	67	25	27.17
ZIC4	0	genome.wustl.edu	37	3	147124452	147124453	+	RNA	INS	-	-	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	3	147124452	147124453	-	T	INS	ZIC4	ENST00000464144	human	ensembl	74_37	-1	putative	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	ZIC4	HGNC	ENSG00000174963	tier1			54	0	0.00	53	6	10.17
ZNF441	0	genome.wustl.edu	37	19	11892530	11892530	+	Missense_Mutation	SNP	C	C	G			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	19	11892530	11892530	C	G	SNP	ZNF441	ENST00000357901	human	ensembl	74_37	+1	known	missense	c.1891	p.R631G	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF441	HGNC	ENSG00000197044				66	0	0.00	70	4	5.41
ZNF767	0	genome.wustl.edu	37	7	149318616	149318616	+	RNA	SNP	G	G	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	7	149318616	149318616	G	T	SNP	ZNF767	ENST00000463567	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.023	-	-	-	no_errors	ZNF767	HGNC	ENSG00000133624				80	0	0.00	72	4	5.26
ZNF804B	0	genome.wustl.edu	37	7	88964965	88964965	+	Missense_Mutation	SNP	A	A	C			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	7	88964965	88964965	A	C	SNP	ZNF804B	ENST00000333190	human	ensembl	74_37	+1	known	missense	c.2669	p.K890T	0.001	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804B	HGNC	ENSG00000182348	tier1	-	-	75	0	0.00	55	22	28.57
ZNF804B	0	genome.wustl.edu	37	7	88965418	88965418	+	Missense_Mutation	SNP	A	A	T			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	7	88965418	88965418	A	T	SNP	ZNF804B	ENST00000333190	human	ensembl	74_37	+1	known	missense	c.3122	p.N1041I	0.996	NULL	pfam_Znf_C2H2_jaz	-	no_errors	ZNF804B	HGNC	ENSG00000182348	tier1	-	-	46	0	0.00	30	3	9.09
ZZZ3	0	genome.wustl.edu	37	1	78030139	78030139	+	RNA	DEL	A	A	-			TCGA-L5-A8NT-01A-11D-A37C-09	TCGA-L5-A8NT-11A-11D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4e143e72-fabb-477f-a577-53f0ab1c2a5c	5a9e8a71-e4fd-4699-bd7a-a02771c76ebc	1	78030139	78030139	A	-	DEL	ZZZ3	ENST00000481346	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZZZ3	HGNC	ENSG00000036549	tier1			40	0	0.00	30	3	9.09
