Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCB1	0	genome.wustl.edu	37	7	87196171	87196171	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	87196171	87196171	C	A	SNP	ABCB1	ENST00000265724	human	ensembl	74_37	-1	known	missense	c.460	p.A154S	0.952	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB1	HGNC	ENSG00000085563	tier1	-	-	43	0	0.00	33	194	85.46
ABCC6	0	genome.wustl.edu	37	16	16276745	16276745	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	16276745	16276745	G	T	SNP	ABCC6	ENST00000205557	human	ensembl	74_37	-1	known	silent	c.1986	p.V662	0.411	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC6	HGNC	ENSG00000091262	tier1	-	-	45	0	0.00	32	21	39.62
ABCC9	0	genome.wustl.edu	37	12	22012598	22012598	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	22012598	22012598	G	T	SNP	ABCC9	ENST00000261200	human	ensembl	74_37	-1	known	silent	c.2427	p.G809	0.988	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_Sulphorea_rcpt,prints_Sulphonylurea_rcpt-2	-	no_errors	ABCC9	HGNC	ENSG00000069431	tier1	-	-	13	0	0.00	26	17	39.53
ACSM2B	0	genome.wustl.edu	37	16	20556566	20556566	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	20556566	20556566	C	A	SNP	ACSM2B	ENST00000329697	human	ensembl	74_37	-1	known	missense	c.1194	p.K398N	0.001	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM2B	HGNC	ENSG00000066813	tier1	-	-	34	0	0.00	25	32	56.14
ACSS3	0	genome.wustl.edu	37	12	81472130	81472130	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	81472130	81472130	G	T	SNP	ACSS3	ENST00000548058	human	ensembl	74_37	+1	known	missense	c.231	p.W77C	1.000	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSS3	HGNC	ENSG00000111058	tier1	-	-	19	0	0.00	2	8	80.00
ADAM18	0	genome.wustl.edu	37	8	39502989	39502989	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	8	39502989	39502989	G	C	SNP	ADAM18	ENST00000265707	human	ensembl	74_37	+1	known	missense	c.1042	p.A348P	0.986	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B	-	no_errors	ADAM18	HGNC	ENSG00000168619	tier1	-	-	31	0	0.00	71	21	22.83
ADRA1A	0	genome.wustl.edu	37	8	26627766	26627766	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	8	26627766	26627766	C	A	SNP	ADRA1A	ENST00000276393	human	ensembl	74_37	-1	known	missense	c.1301	p.C434F	1.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_ADRA1A_rcpt,prints_GPCR_Rhodpsn,prints_ADR_fam	-	no_errors	ADRA1A	HGNC	ENSG00000120907	tier1	-	-	80	0	0.00	7	35	83.33
AEN	0	genome.wustl.edu	37	15	89169568	89169568	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	15	89169568	89169568	G	T	SNP	AEN	ENST00000379231	human	ensembl	74_37	+1	known	missense	c.128	p.R43L	0.953	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	AEN	HGNC	ENSG00000181026	tier1	-	-	36	0	0.00	16	13	44.83
AGBL1	0	genome.wustl.edu	37	15	86791012	86791012	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	15	86791012	86791012	G	T	SNP	AGBL1	ENST00000441037	human	ensembl	74_37	+1	known	missense	c.499	p.G167C	0.775	superfamily_ARM-type_fold	pfam_Peptidase_M14,superfamily_ARM-type_fold	-	no_errors	AGBL1	HGNC	ENSG00000166748	tier1	-	-	38	0	0.00	21	18	46.15
AKAP4	0	genome.wustl.edu	37	X	49958206	49958206	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	X	49958206	49958206	G	C	SNP	AKAP4	ENST00000358526	human	ensembl	74_37	-1	known	missense	c.1158	p.C386W	1.000	pfam_AKAP_110_C,smart_AKAP_110	pfam_AKAP_110_C,pfam_RII_binding_1,smart_AKAP_110	-	no_errors	AKAP4	HGNC	ENSG00000147081	tier1	-	-	15	0	0.00	2	16	88.89
AMBRA1	0	genome.wustl.edu	37	11	46430144	46430144	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	46430144	46430144	C	A	SNP	AMBRA1	ENST00000458649	human	ensembl	74_37	-1	known	missense	c.3322	p.A1108S	1.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	AMBRA1	HGNC	ENSG00000110497	tier1	-	-	31	0	0.00	45	19	29.69
ANAPC4	0	genome.wustl.edu	37	4	25394002	25394002	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	25394002	25394002	C	T	SNP	ANAPC4	ENST00000510092	human	ensembl	74_37	+1	known	missense	c.748	p.R250W	1.000	pirsf_APC4_metazoa	superfamily_WD40_repeat_dom,pirsf_APC4_metazoa	-	no_errors	ANAPC4	HGNC	ENSG00000053900				48	0	0.00	31	2	6.06
ANKRD20A8P	0	genome.wustl.edu	37	2	95481484	95481484	+	RNA	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	95481484	95481484	G	A	SNP	ANKRD20A8P	ENST00000432432	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.592	-	-	-	no_errors	ANKRD20A8P	HGNC	ENSG00000229089	tier1	-	-	74	0	0.00	53	48	47.52
APBA3	0	genome.wustl.edu	37	19	3751454	3751454	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	3751454	3751454	C	A	SNP	APBA3	ENST00000316757	human	ensembl	74_37	-1	known	missense	c.1493	p.G498V	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PTB/PI_dom,pfam_PDZ,superfamily_PDZ,smart_PTB/PI_dom,smart_PDZ,pfscan_PDZ,pfscan_PTB/PI_dom	-	no_errors	APBA3	HGNC	ENSG00000011132	tier1	-	-	8	0	0.00	6	4	40.00
ARC	0	genome.wustl.edu	37	8	143695284	143695284	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	8	143695284	143695284	G	T	SNP	ARC	ENST00000356613	human	ensembl	74_37	-1	known	missense	c.349	p.R117S	0.118	prints_Activity-reg_cytoskelet-assoc	prints_Activity-reg_cytoskelet-assoc	-	no_errors	ARC	HGNC	ENSG00000198576	tier1	-	-	15	0	0.00	8	5	38.46
ARFGAP1	0	genome.wustl.edu	37	20	61917478	61917478	+	Silent	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	20	61917478	61917478	G	C	SNP	ARFGAP1	ENST00000370275	human	ensembl	74_37	+1	known	silent	c.981	p.V327	0.000	NULL	pfam_ArfGAP,smart_ArfGAP,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ARFGAP1	HGNC	ENSG00000101199	tier1	-	-	21	0	0.00	11	8	42.11
ARG2	0	genome.wustl.edu	37	14	68113432	68113432	+	Silent	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	14	68113432	68113432	G	C	SNP	ARG2	ENST00000261783	human	ensembl	74_37	+1	known	silent	c.594	p.L198	0.988	pfam_Ureohydrolase,prints_Ureohydrolase,tigrfam_Arginase	pfam_Ureohydrolase,prints_Ureohydrolase,tigrfam_Arginase	-	no_errors	ARG2	HGNC	ENSG00000081181	tier1	-	-	95	0	0.00	48	37	43.53
ATM	0	genome.wustl.edu	37	11	108117828	108117828	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	108117828	108117828	G	A	SNP	ATM	ENST00000278616	human	ensembl	74_37	+1	known	missense	c.1039	p.E347K	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311	tier1	-	-	28	0	0.00	21	17	44.74
ATM	0	genome.wustl.edu	37	11	108117836	108117836	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	108117836	108117836	G	A	SNP	ATM	ENST00000278616	human	ensembl	74_37	+1	known	missense	c.1047	p.M349I	1.000	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311	tier1	-	-	29	0	0.00	21	13	38.24
ATP1A3	0	genome.wustl.edu	37	19	42474551	42474551	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	42474551	42474551	C	A	SNP	ATP1A3	ENST00000302102	human	ensembl	74_37	-1	known	missense	c.2407	p.G803C	1.000	pfam_ATPase_P-typ_cation-transptr_C,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A3	HGNC	ENSG00000105409	tier1	-	-	58	0	0.00	45	14	23.73
ATP2B2	0	genome.wustl.edu	37	3	10392245	10392245	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	10392245	10392245	C	A	SNP	ATP2B2	ENST00000352432	human	ensembl	74_37	-1	known	missense	c.2153	p.R718L	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_plasma	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B2	HGNC	ENSG00000157087	tier1	-	-	35	0	0.00	1	23	95.83
ATP5C1	0	genome.wustl.edu	37	10	7848961	7848961	+	RNA	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	10	7848961	7848961	C	A	SNP	ATP5C1	ENST00000465936	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ATP5C1	HGNC	ENSG00000165629	tier1	-	-	68	0	0.00	53	38	41.76
ATP8B4	0	genome.wustl.edu	37	15	50168486	50168486	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	15	50168486	50168486	C	A	SNP	ATP8B4	ENST00000284509	human	ensembl	74_37	-1	known	missense	c.3016	p.V1006F	1.000	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B4	HGNC	ENSG00000104043	tier1	-	-	33	0	0.00	20	21	51.22
ATXN10	0	genome.wustl.edu	37	22	46136258	46136258	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	22	46136258	46136258	G	C	SNP	ATXN10	ENST00000252934	human	ensembl	74_37	+1	known	missense	c.1013	p.R338P	0.869	superfamily_ARM-type_fold	pfam_Ataxin-10_domain,superfamily_ARM-type_fold	-	no_errors	ATXN10	HGNC	ENSG00000130638	tier1	-	-	38	0	0.00	31	26	45.61
BAI3	0	genome.wustl.edu	37	6	69665947	69665947	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	69665947	69665947	G	T	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	missense	c.1227	p.W409C	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298	tier1	-	-	42	0	0.00	39	37	48.68
BAI3	0	genome.wustl.edu	37	6	70049228	70049228	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	70049228	70049228	G	T	SNP	BAI3	ENST00000370598	human	ensembl	74_37	+1	known	silent	c.3291	p.A1097	0.487	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_CUB_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI3	HGNC	ENSG00000135298	tier1	-	-	72	0	0.00	43	35	44.87
BANK1	0	genome.wustl.edu	37	4	102951371	102951371	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	102951371	102951371	C	T	SNP	BANK1	ENST00000322953	human	ensembl	74_37	+1	known	nonsense	c.1849	p.R617*	0.568	NULL	superfamily_Ankyrin_rpt-contain_dom	-	no_errors	BANK1	HGNC	ENSG00000153064	tier1	-	-	40	0	0.00	6	27	81.82
BPIFC	0	genome.wustl.edu	37	22	32843205	32843205	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	22	32843205	32843205	G	T	SNP	BPIFC	ENST00000300399	human	ensembl	74_37	-1	known	missense	c.368	p.P123Q	0.998	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFC	HGNC	ENSG00000184459	tier1	-	-	62	0	0.00	35	32	47.76
BRF2	0	genome.wustl.edu	37	8	37702674	37702674	+	Silent	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	8	37702674	37702674	C	T	SNP	BRF2	ENST00000220659	human	ensembl	74_37	-1	known	silent	c.594	p.E198	1.000	superfamily_Cyclin-like	pfam_Znf_TFIIB,superfamily_Cyclin-like,pfscan_Znf_TFIIB	-	no_errors	BRF2	HGNC	ENSG00000104221	tier1	-	-	29	0	0.00	110	24	17.91
BTG3	0	genome.wustl.edu	37	21	18981448	18981448	+	Silent	SNP	A	A	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	21	18981448	18981448	A	G	SNP	BTG3	ENST00000339775	human	ensembl	74_37	-1	known	silent	c.15	p.I5	1.000	pfam_Anti_prolifrtn,smart_Anti_prolifrtn	pfam_Anti_prolifrtn,smart_Anti_prolifrtn,prints_Anti_prolifrtn	-	no_errors	BTG3	HGNC	ENSG00000154640	tier1	-	-	34	0	0.00	24	19	44.19
BTRC	0	genome.wustl.edu	37	10	103310677	103310678	+	RNA	DEL	TG	TG	-			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	10	103310677	103310678	TG	-	DEL	BTRC	ENST00000493877	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	BTRC	HGNC	ENSG00000166167	tier1			47	0	0.00	7	18	72.00
C12orf43	0	genome.wustl.edu	37	12	121442237	121442237	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	121442237	121442237	C	A	SNP	C12orf43	ENST00000288757	human	ensembl	74_37	-1	known	missense	c.508	p.D170Y	0.997	NULL	NULL	-	no_errors	C12orf43	HGNC	ENSG00000157895	tier1	-	-	50	0	0.00	21	24	53.33
C12orf50	0	genome.wustl.edu	37	12	88390397	88390397	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	88390397	88390397	G	T	SNP	C12orf50	ENST00000298699	human	ensembl	74_37	-1	known	missense	c.316	p.P106T	0.970	NULL	NULL	-	no_errors	C12orf50	HGNC	ENSG00000165805	tier1	-	-	34	0	0.00	27	19	41.30
C12orf55	0	genome.wustl.edu	37	12	96983278	96983278	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	96983278	96983278	C	T	SNP	C12orf55	ENST00000524981	human	ensembl	74_37	+1	putative	missense	c.3149	p.S1050L	0.061	NULL	superfamily_Fibronectin_type3	-	no_errors	C12orf55	HGNC	ENSG00000188596	tier1	-	-	42	0	0.00	34	31	47.69
C6orf183	0	genome.wustl.edu	37	6	109575736	109575736	+	RNA	SNP	T	T	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	109575736	109575736	T	C	SNP	C6orf183	ENST00000453496	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	C6orf183	HGNC	ENSG00000243587	tier1	-	-	60	0	0.00	27	18	40.00
CACNA1E	0	genome.wustl.edu	37	1	181685207	181685207	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	181685207	181685207	G	T	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	silent	c.1257	p.R419	0.981	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	tier1	-	-	37	0	0.00	25	31	55.36
CACNA1E	0	genome.wustl.edu	37	1	181688895	181688895	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	181688895	181688895	G	A	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	silent	c.1647	p.V549	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	tier1	-	-	40	0	0.00	34	25	42.37
CALU	0	genome.wustl.edu	37	7	128388853	128388853	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	128388853	128388853	G	T	SNP	CALU	ENST00000479257	human	ensembl	74_37	+1	known	missense	c.240	p.R80S	0.902	smart_EF_hand_dom,pfscan_EF_hand_dom	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CALU	HGNC	ENSG00000128595				13	0	0.00	22	4	15.38
CATSPERG	0	genome.wustl.edu	37	19	38842979	38842979	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	38842979	38842979	G	A	SNP	CATSPERG	ENST00000409235	human	ensembl	74_37	+1	known	missense	c.904	p.A302T	0.372	NULL	NULL	-	no_errors	CATSPERG	HGNC	ENSG00000099338	tier1	-	-	38	0	0.00	52	4	7.14
CBFA2T3	0	genome.wustl.edu	37	16	88947723	88947723	+	Frame_Shift_Del	DEL	C	C	-			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	88947723	88947723	C	-	DEL	CBFA2T3	ENST00000268679	human	ensembl	74_37	-1	known	frame_shift_del	c.1378	p.A460fs	0.000	prints_MTG16	pfam_NHR2,pfam_TAFH_NHR1,pfam_Znf_MYND,smart_TAFH_NHR1,pfscan_TAFH_NHR1,pfscan_Znf_MYND,prints_ETO,prints_MTG16	-	no_errors	CBFA2T3	HGNC	ENSG00000129993	tier1			21	0	0.00	9	5	35.71
CBFA2T3	0	genome.wustl.edu	37	16	88947724	88947724	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	88947724	88947724	G	A	SNP	CBFA2T3	ENST00000268679	human	ensembl	74_37	-1	known	silent	c.1377	p.S459	0.009	prints_MTG16	pfam_NHR2,pfam_TAFH_NHR1,pfam_Znf_MYND,smart_TAFH_NHR1,pfscan_TAFH_NHR1,pfscan_Znf_MYND,prints_ETO,prints_MTG16	-	no_errors	CBFA2T3	HGNC	ENSG00000129993	tier1	rs2272437	-	22	0	0.00	10	5	33.33
CBWD1	0	genome.wustl.edu	37	9	121496	121496	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	9	121496	121496	G	A	SNP	CBWD1	ENST00000356521	human	ensembl	74_37	-1	known	missense	c.1159	p.R387C	0.388	NULL	pfam_CobW/HypB/UreG_dom,pfam_Cbl_biosynth_CobW-like_C,superfamily_P-loop_NTPase,superfamily_Cbl_biosynth_CobW-like_C	-	no_errors	CBWD1	HGNC	ENSG00000172785	tier1	-	-	495	0	0.00	205	180	46.75
CCDC175	0	genome.wustl.edu	37	14	59992116	59992116	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	14	59992116	59992116	G	T	SNP	CCDC175	ENST00000281581	human	ensembl	74_37	-1	known	missense	c.1879	p.Q627K	0.004	NULL	superfamily_Prefoldin	-	no_errors	CCDC175	HGNC	ENSG00000151838	tier1	-	-	43	0	0.00	37	25	40.32
CCDC87	0	genome.wustl.edu	37	11	66358083	66358083	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	66358083	66358083	C	A	SNP	CCDC87	ENST00000333861	human	ensembl	74_37	-1	known	missense	c.2404	p.G802W	1.000	pfam_MAP65_Ase1_PRC1	pfam_MAP65_Ase1_PRC1	-	no_errors	CCDC87	HGNC	ENSG00000182791	tier1	-	-	23	0	0.00	20	7	25.93
CD6	0	genome.wustl.edu	37	11	60785799	60785799	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	60785799	60785799	G	A	SNP	CD6	ENST00000313421	human	ensembl	74_37	+1	known	missense	c.1876	p.G626R	0.998	NULL	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,pfscan_SRCR,prints_SRCR	-	no_errors	CD6	HGNC	ENSG00000013725	tier1	-	-	57	0	0.00	2	28	93.33
CDC42BPB	0	genome.wustl.edu	37	14	103435036	103435036	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	14	103435036	103435036	C	A	SNP	CDC42BPB	ENST00000361246	human	ensembl	74_37	-1	known	silent	c.2013	p.R671	0.290	NULL	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Myotonic_dystrophy_kinase_coil,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,smart_CRIB_dom,pfscan_CRIB_dom,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd	-	no_errors	CDC42BPB	HGNC	ENSG00000198752	tier1	-	-	14	0	0.00	14	9	39.13
CDH2	0	genome.wustl.edu	37	18	25543357	25543357	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	18	25543357	25543357	G	T	SNP	CDH2	ENST00000269141	human	ensembl	74_37	-1	known	silent	c.2478	p.A826	1.000	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH2	HGNC	ENSG00000170558	tier1	-	-	31	0	0.00	24	4	14.29
CELF5	0	genome.wustl.edu	37	19	3285972	3285972	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	3285972	3285972	G	T	SNP	CELF5	ENST00000292672	human	ensembl	74_37	+1	known	missense	c.1135	p.A379S	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CELF5	HGNC	ENSG00000161082				14	0	0.00	2	3	60.00
CEP85L	0	genome.wustl.edu	37	6	118786703	118786703	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	118786703	118786703	C	A	SNP	CEP85L	ENST00000368488	human	ensembl	74_37	-1	known	missense	c.2292	p.E764D	0.995	NULL	NULL	-	no_errors	CEP85L	HGNC	ENSG00000111860	tier1	-	-	45	0	0.00	27	33	55.00
CES1P1	0	genome.wustl.edu	37	16	55806303	55806303	+	RNA	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	55806303	55806303	G	T	SNP	CES1P1	ENST00000571348	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.970	-	-	-	no_errors	CES1P1	HGNC	ENSG00000228695	tier1	-	-	22	0	0.00	25	37	59.68
CHMP4C	0	genome.wustl.edu	37	8	82670388	82670388	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	8	82670388	82670388	G	T	SNP	CHMP4C	ENST00000297265	human	ensembl	74_37	+1	known	missense	c.495	p.M165I	1.000	pfam_Snf7	pfam_Snf7	-	no_errors	CHMP4C	HGNC	ENSG00000164695	tier1	-	-	14	0	0.00	8	9	52.94
CHPF	0	genome.wustl.edu	37	2	220404662	220404662	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	220404662	220404662	C	T	SNP	CHPF	ENST00000243776	human	ensembl	74_37	-1	known	missense	c.1771	p.A591T	0.352	pfam_Chond_GalNAc	pfam_Chond_GalNAc	-	no_errors	CHPF	HGNC	ENSG00000123989				46	0	0.00	34	3	8.11
COG7	0	genome.wustl.edu	37	16	23464262	23464262	+	Silent	SNP	A	A	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	23464262	23464262	A	G	SNP	COG7	ENST00000307149	human	ensembl	74_37	-1	known	silent	c.54	p.N18	0.954	pfam_COG7	pfam_COG7	-	no_errors	COG7	HGNC	ENSG00000168434	tier1	-	-	50	0	0.00	12	9	42.86
COL6A5	0	genome.wustl.edu	37	3	130116450	130116450	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	130116450	130116450	G	T	SNP	COL6A5	ENST00000265379	human	ensembl	74_37	+1	known	missense	c.3592	p.G1198W	0.996	NULL	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752	tier1	-	-	22	0	0.00	1	11	91.67
COMMD1	0	genome.wustl.edu	37	2	62363038	62363038	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	62363038	62363038	G	C	SNP	COMMD1	ENST00000311832	human	ensembl	74_37	+1	known	missense	c.535	p.E179Q	1.000	pfam_HCaRG	pfam_HCaRG	-	no_errors	COMMD1	HGNC	ENSG00000173163	tier1	-	-	79	0	0.00	44	64	59.26
CPXCR1	0	genome.wustl.edu	37	X	88008707	88008707	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	X	88008707	88008707	A	G	SNP	CPXCR1	ENST00000276127	human	ensembl	74_37	+1	known	missense	c.292	p.R98G	0.302	NULL	pfscan_Znf_C2H2	-	no_errors	CPXCR1	HGNC	ENSG00000147183	tier1	-	-	19	0	0.00	1	22	95.65
CR2	0	genome.wustl.edu	37	1	207641998	207641998	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	207641998	207641998	G	T	SNP	CR2	ENST00000367057	human	ensembl	74_37	+1	known	missense	c.572	p.G191V	0.592	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR2	HGNC	ENSG00000117322	tier1	-	-	72	0	0.00	50	4	7.41
CROCCP2	0	genome.wustl.edu	37	1	16945480	16945480	+	RNA	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	16945480	16945480	C	A	SNP	CROCCP2	ENST00000412962	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CROCCP2	HGNC	ENSG00000215908	tier1	-	-	140	0	0.00	136	21	13.38
CRX	0	genome.wustl.edu	37	19	48342913	48342913	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	48342913	48342913	C	A	SNP	CRX	ENST00000221996	human	ensembl	74_37	+1	known	missense	c.589	p.P197T	1.000	pfam_Otx_TF_C	pfam_Homeobox_dom,pfam_Otx_TF_C,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	CRX	HGNC	ENSG00000105392	tier1	-	-	43	0	0.00	6	14	70.00
CSF3R	0	genome.wustl.edu	37	1	36937913	36937913	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	36937913	36937913	C	G	SNP	CSF3R	ENST00000373103	human	ensembl	74_37	-1	known	missense	c.923	p.R308P	0.998	superfamily_Fibronectin_type3,smart_Fibronectin_type3	pfam_IgC2-like_lig-bd,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	CSF3R	HGNC	ENSG00000119535	tier1	-	-	78	0	0.00	41	37	47.44
CSMD3	0	genome.wustl.edu	37	8	113569036	113569036	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	8	113569036	113569036	G	A	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.4190	p.T1397I	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	46	0	0.00	35	30	46.15
CUX2	0	genome.wustl.edu	37	12	111749974	111749974	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	111749974	111749974	G	T	SNP	CUX2	ENST00000261726	human	ensembl	74_37	+1	known	missense	c.1971	p.Q657H	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_Prefoldin,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX2	HGNC	ENSG00000111249	tier1	-	-	8	0	0.00	8	10	55.56
CXADRP3	0	genome.wustl.edu	37	18	14478919	14478919	+	RNA	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	18	14478919	14478919	G	T	SNP	CXADRP3	ENST00000581457	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CXADRP3	HGNC	ENSG00000265766	tier1	-	-	25	0	0.00	27	24	47.06
CYP2A13	0	genome.wustl.edu	37	19	41601712	41601712	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	41601712	41601712	C	G	SNP	CYP2A13	ENST00000330436	human	ensembl	74_37	+1	known	missense	c.1351	p.L451V	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP2A13	HGNC	ENSG00000197838	tier1	-	-	91	0	0.00	112	8	6.67
DACH1	0	genome.wustl.edu	37	13	72131182	72131182	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	13	72131182	72131182	T	A	SNP	DACH1	ENST00000359684	human	ensembl	74_37	-1	known	missense	c.1706	p.E569V	1.000	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	DACH1	HGNC	ENSG00000165659	tier1	-	-	30	0	0.00	2	20	90.91
DAPK1	0	genome.wustl.edu	37	9	90296515	90296515	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	9	90296515	90296515	C	A	SNP	DAPK1	ENST00000469640	human	ensembl	74_37	+1	known	missense	c.2198	p.P733H	0.521	superfamily_P-loop_NTPase	pfam_Prot_kinase_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730	tier1	-	-	46	0	0.00	9	12	57.14
DAPK1	0	genome.wustl.edu	37	9	90321949	90321949	+	Frame_Shift_Del	DEL	C	C	-			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	9	90321949	90321949	C	-	DEL	DAPK1	ENST00000469640	human	ensembl	74_37	+1	known	frame_shift_del	c.4038	p.L1348fs	0.981	pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain,pfscan_Death_domain	pfam_Prot_kinase_dom,pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Death_domain,pfam_LipoPS_kinase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_Prot_kinase_dom,prints_Ankyrin_rpt	-	no_errors	DAPK1	HGNC	ENSG00000196730	tier1			46	0	0.00	22	2	8.33
DARS2	0	genome.wustl.edu	37	1	173808541	173808541	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	173808541	173808541	A	G	SNP	DARS2	ENST00000361951	human	ensembl	74_37	+1	known	missense	c.877	p.I293V	0.996	pfam_aa-tRNA-synt_II,pfscan_aa-tRNA-synth_II,tigrfam_Asp-tRNA-ligase_IIb_bac/mt	pfam_aa-tRNA-synt_II,pfam_GAD_dom,pfam_NA-bd_OB_tRNA,superfamily_GAD_dom,superfamily_NA-bd_OB-fold,pfscan_aa-tRNA-synth_II,prints_Asp/Asn-tRNA-synth_IIb,prints_Lys-tRNA-synth_II_C,tigrfam_Asp-tRNA-ligase_IIb_bac/mt	-	no_errors	DARS2	HGNC	ENSG00000117593	tier1	-	-	52	0	0.00	38	4	9.52
DCAF12L2	0	genome.wustl.edu	37	X	125299265	125299265	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	X	125299265	125299265	C	A	SNP	DCAF12L2	ENST00000360028	human	ensembl	74_37	-1	known	missense	c.643	p.G215C	0.961	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L2	HGNC	ENSG00000198354	tier1	-	-	67	0	0.00	4	39	90.70
DCDC1	0	genome.wustl.edu	37	11	30946948	30946948	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	30946948	30946948	C	A	SNP	DCDC1	ENST00000339794	human	ensembl	74_37	-1	known	nonsense	c.142	p.E48*	0.831	pfscan_Doublecortin_dom	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,pfscan_Doublecortin_dom,pfscan_Ricin_B_lectin	-	no_errors	DCDC1	HGNC	ENSG00000170959	tier1	-	-	35	0	0.00	8	17	68.00
DEFB136	0	genome.wustl.edu	37	8	11831522	11831522	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	8	11831522	11831522	C	A	SNP	DEFB136	ENST00000382209	human	ensembl	74_37	-1	known	missense	c.161	p.C54F	0.557	NULL	NULL	-	no_errors	DEFB136	HGNC	ENSG00000205884	tier1	-	-	32	0	0.00	4	19	82.61
DGKI	0	genome.wustl.edu	37	7	137172381	137172381	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	137172381	137172381	C	G	SNP	DGKI	ENST00000288490	human	ensembl	74_37	-1	known	missense	c.2357	p.R786P	1.000	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DGKI	HGNC	ENSG00000157680	tier1	-	-	17	0	0.00	14	9	39.13
DGKI	0	genome.wustl.edu	37	7	137284581	137284581	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	137284581	137284581	C	A	SNP	DGKI	ENST00000288490	human	ensembl	74_37	-1	known	missense	c.1238	p.G413V	1.000	pfam_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kinase_cat_dom	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DGKI	HGNC	ENSG00000157680	tier1	-	-	16	0	0.00	8	14	63.64
DHPS	0	genome.wustl.edu	37	19	12792434	12792434	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	12792434	12792434	G	T	SNP	DHPS	ENST00000210060	human	ensembl	74_37	-1	known	missense	c.147	p.F49L	0.838	pfam_Deoxyhypusine_synthase,tigrfam_Deoxyhypusine_synthase	pfam_Deoxyhypusine_synthase,tigrfam_Deoxyhypusine_synthase	-	no_errors	DHPS	HGNC	ENSG00000095059	tier1	-	-	49	0	0.00	29	25	46.30
DHX34	0	genome.wustl.edu	37	19	47870310	47870310	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	47870310	47870310	A	G	SNP	DHX34	ENST00000328771	human	ensembl	74_37	+1	known	missense	c.1666	p.T556A	1.000	superfamily_P-loop_NTPase,smart_Helicase-assoc_dom	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX34	HGNC	ENSG00000134815				34	0	0.00	20	6	23.08
DMD	0	genome.wustl.edu	37	X	32490336	32490336	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	X	32490336	32490336	G	T	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.2894	p.P965H	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	32	0	0.00	5	32	86.49
DNAH12	0	genome.wustl.edu	37	3	57431006	57431006	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	57431006	57431006	G	A	SNP	DNAH12	ENST00000351747	human	ensembl	74_37	-1	known	silent	c.4251	p.L1417	0.961	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH12	HGNC	ENSG00000174844	tier1	-	-	39	0	0.00	2	40	95.24
DNMBP	0	genome.wustl.edu	37	10	101716195	101716195	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	10	101716195	101716195	C	A	SNP	DNMBP	ENST00000342239	human	ensembl	74_37	-1	known	missense	c.1036	p.A346S	0.000	superfamily_SH3_domain	pfam_BAR_dom,pfam_SH3_domain,pfam_SH3_2,pfam_DH-domain,superfamily_DH-domain,superfamily_SH3_domain,smart_SH3_domain,smart_DH-domain,smart_BAR_dom,pfscan_BAR_dom,pfscan_SH3_domain,pfscan_DH-domain,prints_p67phox,prints_Spectrin_alpha_SH3	-	no_errors	DNMBP	HGNC	ENSG00000107554	tier1	-	-	23	0	0.00	0	10	100.00
DPP6	0	genome.wustl.edu	37	7	154237656	154237656	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	154237656	154237656	G	T	SNP	DPP6	ENST00000377770	human	ensembl	74_37	+1	known	missense	c.497	p.R166I	1.000	NULL	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_PD40	-	no_errors	DPP6	HGNC	ENSG00000130226	tier1	-	-	12	0	0.00	3	10	76.92
DPY19L2P4	0	genome.wustl.edu	37	7	89748926	89748926	+	RNA	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	89748926	89748926	C	T	SNP	DPY19L2P4	ENST00000497063	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.123	-	-	-	no_errors	DPY19L2P4	HGNC	ENSG00000235436				16	0	0.00	115	8	6.45
DVL3	0	genome.wustl.edu	37	3	183882071	183882071	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	183882071	183882071	G	A	SNP	DVL3	ENST00000313143	human	ensembl	74_37	+1	known	missense	c.248	p.G83D	1.000	NULL	pfam_Dishevelled_C-dom,pfam_DIX,pfam_Dishevelled_protein_dom,pfam_PDZ,pfam_DEP_dom,superfamily_PDZ,smart_DIX,smart_PDZ,smart_DEP_dom,pfscan_DEP_dom,pfscan_DIX,pfscan_PDZ,prints_Dishevelled_fam,prints_Dishevelled_3	-	no_errors	DVL3	HGNC	ENSG00000161202	tier1	-	-	27	0	0.00	13	67	83.75
ELMOD1	0	genome.wustl.edu	37	11	107518316	107518316	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	107518316	107518316	G	T	SNP	ELMOD1	ENST00000265840	human	ensembl	74_37	+1	known	silent	c.543	p.L181	0.997	pfam_Engulfment_cell_motility_ELMO	pfam_Engulfment_cell_motility_ELMO	-	no_errors	ELMOD1	HGNC	ENSG00000110675	tier1	-	-	49	0	0.00	37	36	49.32
EMR3	0	genome.wustl.edu	37	19	14740853	14740853	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	14740853	14740853	G	T	SNP	EMR3	ENST00000253673	human	ensembl	74_37	-1	known	missense	c.1810	p.Q604K	0.993	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_EMR1_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_CD97	-	no_errors	EMR3	HGNC	ENSG00000131355	tier1	-	-	24	0	0.00	13	16	55.17
ENPP7	0	genome.wustl.edu	37	17	77707327	77707327	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	77707327	77707327	G	C	SNP	ENPP7	ENST00000328313	human	ensembl	74_37	+1	known	missense	c.275	p.G92A	1.000	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,pfam_Metalloenzyme,superfamily_Alkaline_phosphatase_core	-	no_errors	ENPP7	HGNC	ENSG00000182156	tier1	-	-	48	0	0.00	135	25	15.53
ENSG00000197182	0	genome.wustl.edu	37	22	46493817	46493817	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	22	46493817	46493817	G	T	SNP	ENSG00000197182	ENST00000435439	human	ensembl	74_37	+1	known	missense	c.11	p.R4L	0.000	NULL	NULL	-	no_errors	FLJ27365	Uniprot_gn	ENSG00000197182	tier1	-	-	33	0	0.00	18	14	43.75
ENSG00000205018	0	genome.wustl.edu	37	16	89017215	89017215	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	89017215	89017215	G	C	SNP	ENSG00000205018	ENST00000378347	human	ensembl	74_37	+1	putative	missense	c.689	p.R230P	0.832	NULL	NULL	-	no_errors	RP11-830F9.6	Clone_based_vega_gene	ENSG00000205018	tier1	rs113408433	-	47	0	0.00	20	6	23.08
ENSG00000225891	0	genome.wustl.edu	37	1	26793763	26793764	+	RNA	INS	-	-	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	26793763	26793764	-	A	INS	ENSG00000225891	ENST00000423060	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP3-476K8.3	Clone_based_vega_gene	ENSG00000225891	tier1			45	0	0.00	34	4	10.53
ENSG00000251966	0	genome.wustl.edu	37	Y	10034012	10034012	+	RNA	DEL	T	T	-			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	Y	10034012	10034012	T	-	DEL	ENSG00000251966	ENST00000516157	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	AC010970.1	Clone_based_ensembl_gene	ENSG00000251966	tier1			57	0	0.00	3	3	50.00
EPB41L5	0	genome.wustl.edu	37	2	120922456	120922456	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	120922456	120922456	G	A	SNP	EPB41L5	ENST00000263713	human	ensembl	74_37	+1	known	silent	c.1932	p.E644	1.000	NULL	pfam_FERM_central,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	EPB41L5	HGNC	ENSG00000115109	tier1	-	-	40	0	0.00	3	17	85.00
EPPK1	0	genome.wustl.edu	37	8	144947157	144947157	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	8	144947157	144947157	G	T	SNP	EPPK1	ENST00000525985	human	ensembl	74_37	-1	known	silent	c.265	p.R89	0.000	pfam_Plectin_repeat,smart_Plectin_repeat	pfam_Plectin_repeat,smart_Plectin_repeat	-	no_errors	EPPK1	HGNC	ENSG00000227184	tier1	-	-	64	0	0.00	51	34	40.00
EVPLL	0	genome.wustl.edu	37	17	18284783	18284783	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	18284783	18284783	G	A	SNP	EVPLL	ENST00000399134	human	ensembl	74_37	+1	novel	missense	c.166	p.V56M	1.000	NULL	NULL	-	no_errors	EVPLL	HGNC	ENSG00000214860	tier1	-	-	81	0	0.00	39	46	54.12
EXD1	0	genome.wustl.edu	37	15	41476502	41476502	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	15	41476502	41476502	T	G	SNP	EXD1	ENST00000314992	human	ensembl	74_37	-1	known	missense	c.1172	p.N391T	0.001	NULL	pfam_3'-5'_exonuclease_dom,superfamily_RNaseH-like_dom,smart_3'-5'_exonuclease_dom	-	no_errors	EXD1	HGNC	ENSG00000178997	tier1	-	-	51	0	0.00	38	24	38.71
EXOC6B	0	genome.wustl.edu	37	2	72606863	72606863	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	72606863	72606863	C	A	SNP	EXOC6B	ENST00000272427	human	ensembl	74_37	-1	known	missense	c.2117	p.C706F	1.000	pfam_Sec15,pirsf_Sec15	pfam_Sec15,pirsf_Sec15	-	no_errors	EXOC6B	HGNC	ENSG00000144036	tier1	-	-	29	0	0.00	17	17	50.00
EYS	0	genome.wustl.edu	37	6	65301594	65301594	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	65301594	65301594	G	T	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	missense	c.4166	p.A1389E	0.016	NULL	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	tier1	-	-	37	0	0.00	21	25	54.35
FAM172A	0	genome.wustl.edu	37	5	93217190	93217190	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	93217190	93217190	G	T	SNP	FAM172A	ENST00000395965	human	ensembl	74_37	-1	known	missense	c.772	p.Q258K	1.000	NULL	pfam_Arb2_domain	-	no_errors	FAM172A	HGNC	ENSG00000113391	tier1	-	-	51	0	0.00	34	5	12.82
FAM194A	0	genome.wustl.edu	37	3	150421606	150421606	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	150421606	150421606	T	A	SNP	FAM194A	ENST00000295910	human	ensembl	74_37	-1	known	missense	c.80	p.E27V	0.000	NULL	NULL	-	no_errors	FAM194A	HGNC	ENSG00000163645				14	0	0.00	46	5	9.80
FAM65B	0	genome.wustl.edu	37	6	24875925	24875925	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	24875925	24875925	C	A	SNP	FAM65B	ENST00000259698	human	ensembl	74_37	-1	known	missense	c.95	p.R32L	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FAM65B	HGNC	ENSG00000111913	tier1	-	-	21	0	0.00	28	15	34.88
FAM71D	0	genome.wustl.edu	37	14	67675093	67675093	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	14	67675093	67675093	G	A	SNP	FAM71D	ENST00000311864	human	ensembl	74_37	+1	known	missense	c.1087	p.E363K	0.003	NULL	pfam_DUF3699	-	no_errors	FAM71D	HGNC	ENSG00000172717	tier1	-	-	34	0	0.00	23	17	42.50
FAM81A	0	genome.wustl.edu	37	15	59808891	59808891	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	15	59808891	59808891	C	A	SNP	FAM81A	ENST00000288228	human	ensembl	74_37	+1	known	silent	c.834	p.A278	0.968	superfamily_Ferritin-like_SF	superfamily_Ferritin-like_SF	-	no_errors	FAM81A	HGNC	ENSG00000157470	tier1	-	-	19	0	0.00	7	7	50.00
FAM83B	0	genome.wustl.edu	37	6	54735047	54735047	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	54735047	54735047	G	T	SNP	FAM83B	ENST00000306858	human	ensembl	74_37	+1	known	missense	c.3	p.M1I	1.000	NULL	pfam_DUF1669	-	no_errors	FAM83B	HGNC	ENSG00000168143				15	0	0.00	18	2	10.00
FANK1	0	genome.wustl.edu	37	10	127686054	127686054	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	10	127686054	127686054	G	T	SNP	FANK1	ENST00000368693	human	ensembl	74_37	+1	known	missense	c.539	p.S180I	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Fibronectin_type3,prints_Ankyrin_rpt	-	no_errors	FANK1	HGNC	ENSG00000203780	tier1	-	-	57	0	0.00	5	36	87.80
FBN3	0	genome.wustl.edu	37	19	8161811	8161811	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	8161811	8161811	G	T	SNP	FBN3	ENST00000270509	human	ensembl	74_37	-1	known	nonsense	c.5367	p.C1789*	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_FBN,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449	tier1	-	-	20	0	0.00	7	9	56.25
FCRL2	0	genome.wustl.edu	37	1	157738276	157738276	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	157738276	157738276	C	A	SNP	FCRL2	ENST00000361516	human	ensembl	74_37	-1	known	missense	c.811	p.G271C	0.021	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL2	HGNC	ENSG00000132704	tier1	-	-	27	0	0.00	24	13	35.14
FCRL3	0	genome.wustl.edu	37	1	157659609	157659609	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	157659609	157659609	C	G	SNP	FCRL3	ENST00000492769	human	ensembl	74_37	-1	known	missense	c.1807	p.A603P	0.000	NULL	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL3	HGNC	ENSG00000160856	tier1	-	-	55	0	0.00	21	11	34.38
FCRL3	0	genome.wustl.edu	37	1	157665953	157665953	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	157665953	157665953	G	T	SNP	FCRL3	ENST00000492769	human	ensembl	74_37	-1	known	missense	c.1009	p.R337S	0.000	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL3	HGNC	ENSG00000160856	tier1	-	-	54	0	0.00	19	16	45.71
FES	0	genome.wustl.edu	37	15	91434332	91434332	+	Silent	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	15	91434332	91434332	C	T	SNP	FES	ENST00000328850	human	ensembl	74_37	+1	known	silent	c.1441	p.L481	1.000	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_SH2,smart_SH2,prints_SH2,pfscan_SH2	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_FCH_dom,superfamily_Kinase-like_dom,superfamily_t-SNARE,smart_FCH_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,pfscan_FCH_dom,pfscan_SH2,pfscan_Prot_kinase_dom	-	no_errors	FES	HGNC	ENSG00000182511	tier1	-	-	41	0	0.00	31	22	41.51
FLG	0	genome.wustl.edu	37	1	152280796	152280796	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	152280796	152280796	G	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.6566	p.A2189E	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	193	0	0.00	180	89	33.09
FMN1	0	genome.wustl.edu	37	15	33261476	33261476	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	15	33261476	33261476	C	T	SNP	FMN1	ENST00000334528	human	ensembl	74_37	-1	known	missense	c.1757	p.R586K	1.000	prints_Formin_Cappuccino_subfam	pfam_FH2_Formin,smart_FH2_Formin,prints_Formin_Cappuccino_subfam	-	no_errors	FMN1	HGNC	ENSG00000248905	tier1	-	-	68	0	0.00	46	33	41.77
FOXD4L1	0	genome.wustl.edu	37	2	114257058	114257059	+	In_Frame_Ins	INS	-	-	GGC			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	114257058	114257059	-	GGC	INS	FOXD4L1	ENST00000306507	human	ensembl	74_37	+1	known	in_frame_ins	c.225_226	p.78in_frame_insG	0.000:0.003	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXD4L1	HGNC	ENSG00000184492	tier1			61	0	0.00	3	3	50.00
FREM2	0	genome.wustl.edu	37	13	39438592	39438592	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	13	39438592	39438592	C	G	SNP	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	missense	c.7832	p.P2611R	1.000	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	tier1	-	-	42	0	0.00	40	25	38.46
FSCB	0	genome.wustl.edu	37	14	44974273	44974273	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	14	44974273	44974273	C	G	SNP	FSCB	ENST00000340446	human	ensembl	74_37	-1	known	missense	c.1918	p.E640Q	0.006	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139				53	0	0.00	47	12	20.34
FUNDC2P2	0	genome.wustl.edu	37	2	84518478	84518478	+	RNA	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	84518478	84518478	C	T	SNP	FUNDC2P2	ENST00000331369	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.256	-	-	-	no_errors	FUNDC2P2	HGNC	ENSG00000182814	tier1	-	-	41	0	0.00	26	18	40.91
GCDH	0	genome.wustl.edu	37	19	13008521	13008521	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	13008521	13008521	G	T	SNP	GCDH	ENST00000222214	human	ensembl	74_37	+1	known	missense	c.1087	p.A363S	0.938	pfam_AcylCo_DH/oxidase_C,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCo_DH/oxidase_C	pfam_AcylCo_DH/oxidase_C,pfam_AcylCoA_DH/ox_N,pfam_Acyl-CoA_Oxase/DH_cen-dom,pfam_Acyl-CoA_DH_2_C,superfamily_AcylCoA_DH/oxidase_NM_dom,superfamily_AcylCo_DH/oxidase_C	-	no_errors	GCDH	HGNC	ENSG00000105607	tier1	-	-	47	0	0.00	34	4	10.00
GDPD4	0	genome.wustl.edu	37	11	76954790	76954790	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	76954790	76954790	T	A	SNP	GDPD4	ENST00000376217	human	ensembl	74_37	-1	known	missense	c.1190	p.N397I	0.982	superfamily_PLC-like_Pdiesterase_TIM-brl	pfam_GlyceroP-diester-Pdiesterase,superfamily_PLC-like_Pdiesterase_TIM-brl	-	no_errors	GDPD4	HGNC	ENSG00000178795				51	0	0.00	86	5	5.49
GLG1	0	genome.wustl.edu	37	16	74506261	74506261	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	74506261	74506261	G	C	SNP	GLG1	ENST00000205061	human	ensembl	74_37	-1	known	missense	c.2101	p.Q701E	1.000	pfam_Cys-rich_GLG1_repeat	pfam_Cys-rich_GLG1_repeat	-	no_errors	GLG1	HGNC	ENSG00000090863	tier1	-	-	88	0	0.00	58	50	46.30
GLRA3	0	genome.wustl.edu	37	4	175565081	175565081	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	175565081	175565081	C	G	SNP	GLRA3	ENST00000274093	human	ensembl	74_37	-1	known	missense	c.1251	p.M417I	1.000	superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAA_rcpt,prints_Glycine_rcpt_A3,prints_Glycine_rcpt_A,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GLRA3	HGNC	ENSG00000145451	tier1	-	-	43	0	0.00	29	25	46.30
GOLGA6L6	0	genome.wustl.edu	37	15	20740459	20740461	+	In_Frame_Del	DEL	TCG	TCG	-			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	TCG	TCG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	15	20740459	20740461	TCG	0	DEL	GOLGA6L6	ENST00000427390	human	ensembl	74_37	-1	known	in_frame_del	c.1291_1289	p.AK430in_frame_delE	0.966:0.963:0.960	NULL	superfamily_Ribosomal_L7/12_C/ClpS-like,prints_Tropomyosin	-	no_errors	GOLGA6L6	HGNC	ENSG00000215405				13	0	0.00	28	8	22.22
GREB1L	0	genome.wustl.edu	37	18	19020304	19020304	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	18	19020304	19020304	G	T	SNP	GREB1L	ENST00000424526	human	ensembl	74_37	+1	known	missense	c.1024	p.G342C	0.999	NULL	superfamily_P-loop_NTPase	-	no_errors	GREB1L	HGNC	ENSG00000141449	tier1	-	-	53	0	0.00	44	43	48.86
GRIN2B	0	genome.wustl.edu	37	12	13716394	13716394	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	13716394	13716394	G	A	SNP	GRIN2B	ENST00000609686	human	ensembl	74_37	-1	known	silent	c.3778	p.L1260	1.000	pfam_NMDAR2_C	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2B	HGNC	ENSG00000273079	tier1	-	-	31	0	0.00	16	21	56.76
GRM7	0	genome.wustl.edu	37	3	7188296	7188296	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	7188296	7188296	C	A	SNP	GRM7	ENST00000402647	human	ensembl	74_37	+1	known	nonsense	c.677	p.S226*	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_7,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM7	HGNC	ENSG00000196277	tier1	-	-	39	0	0.00	5	27	84.38
GRM7	0	genome.wustl.edu	37	3	7456848	7456848	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	7456848	7456848	C	A	SNP	GRM7	ENST00000402647	human	ensembl	74_37	+1	known	missense	c.1172	p.T391K	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_7,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM7	HGNC	ENSG00000196277	tier1	-	-	56	0	0.00	5	31	86.11
GRM8	0	genome.wustl.edu	37	7	126883165	126883165	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	126883165	126883165	G	A	SNP	GRM8	ENST00000339582	human	ensembl	74_37	-1	known	missense	c.94	p.H32Y	1.000	prints_GPCR_3_mtglu_rcpt_8,prints_GPCR_3_mtglu_rcpt_4	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_8,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4,pfscan_GPCR_3_C	-	no_errors	GRM8	HGNC	ENSG00000179603	tier1	-	-	22	0	0.00	21	15	41.67
GRTP1	0	genome.wustl.edu	37	13	114009757	114009757	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	13	114009757	114009757	C	A	SNP	GRTP1	ENST00000375430	human	ensembl	74_37	-1	known	missense	c.221	p.R74L	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	GRTP1	HGNC	ENSG00000139835	tier1	-	-	52	0	0.00	1	21	95.45
HCRTR1	0	genome.wustl.edu	37	1	32098083	32098083	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	32098083	32098083	C	A	SNP	HCRTR1	ENST00000373705	human	ensembl	74_37	+1	known	silent	c.1134	p.G378	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Orexin_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	HCRTR1	HGNC	ENSG00000121764	tier1	-	-	42	0	0.00	23	20	46.51
HCRTR2	0	genome.wustl.edu	37	6	55128601	55128601	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	55128601	55128601	G	T	SNP	HCRTR2	ENST00000370862	human	ensembl	74_37	+1	known	missense	c.743	p.R248L	0.998	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Orexin_rcpt	pfam_GPCR_Rhodpsn,pfam_Orexin_rcpt_2,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Orexin_rcpt,prints_GPCR_Rhodpsn,prints_Orexin_rcpt_2,prints_NPY_rcpt	-	no_errors	HCRTR2	HGNC	ENSG00000137252	tier1	-	-	38	0	0.00	20	12	37.50
HECTD4	0	genome.wustl.edu	37	12	112673435	112673435	+	Silent	SNP	T	T	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	112673435	112673435	T	A	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	silent	c.5082	p.G1694	0.086	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064	tier1	-	-	27	0	0.00	21	17	44.74
HIP1	0	genome.wustl.edu	37	7	75186055	75186055	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	75186055	75186055	C	A	SNP	HIP1	ENST00000336926	human	ensembl	74_37	-1	known	nonsense	c.1642	p.E548*	0.997	NULL	pfam_ANTH_dom,pfam_ILWEQ_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,superfamily_ARM-type_fold,superfamily_Prefoldin,smart_Epsin-like_N,smart_ILWEQ_dom,pfscan_Epsin-like_N,pfscan_ILWEQ_dom	-	no_errors	HIP1	HGNC	ENSG00000127946	tier1	-	-	24	0	0.00	6	12	66.67
HIST1H1A	0	genome.wustl.edu	37	6	26017517	26017517	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	26017517	26017517	C	G	SNP	HIST1H1A	ENST00000244573	human	ensembl	74_37	-1	known	missense	c.444	p.K148N	0.024	NULL	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1A	HGNC	ENSG00000124610	tier1	-	-	44	0	0.00	56	24	29.63
HIST1H2BE	0	genome.wustl.edu	37	6	26184245	26184245	+	Silent	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	26184245	26184245	C	T	SNP	HIST1H2BE	ENST00000356530	human	ensembl	74_37	+1	known	silent	c.222	p.I74	1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BE	HGNC	ENSG00000197697	tier1	-	-	98	0	0.00	53	38	41.76
HLA-DPB1	0	genome.wustl.edu	37	6	33048746	33048746	+	RNA	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	33048746	33048746	C	A	SNP	HLA-DPB1	ENST00000478189	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HLA-DPB1	HGNC	ENSG00000223865	tier1	-	-	33	0	0.00	18	17	48.57
HMCN1	0	genome.wustl.edu	37	1	186135324	186135324	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	186135324	186135324	G	A	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.15328	p.E5110K	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	55	0	0.00	43	22	33.85
HOXD3	0	genome.wustl.edu	37	2	177034035	177034035	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	177034035	177034035	G	T	SNP	HOXD3	ENST00000249440	human	ensembl	74_37	+1	known	missense	c.193	p.G65C	0.945	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXD3	HGNC	ENSG00000128652	tier1	-	-	47	0	0.00	4	32	88.89
HSP90AA4P	0	genome.wustl.edu	37	4	190395328	190395328	+	RNA	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	190395328	190395328	C	A	SNP	HSP90AA4P	ENST00000378770	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.995	-	-	-	no_errors	HSP90AA4P	HGNC	ENSG00000205100	tier1	-	-	31	0	0.00	24	16	40.00
HYDIN	0	genome.wustl.edu	37	16	70874024	70874024	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	70874024	70874024	C	A	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	missense	c.12986	p.G4329V	1.000	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	30	0	0.00	20	19	48.72
HYDIN	0	genome.wustl.edu	37	16	70891651	70891651	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	70891651	70891651	G	T	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	silent	c.12252	p.I4084	0.992	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	77	0	0.00	79	25	24.04
IGSF23	0	genome.wustl.edu	37	19	45127033	45127033	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	45127033	45127033	C	A	SNP	IGSF23	ENST00000402988	human	ensembl	74_37	+1	known	missense	c.155	p.P52Q	0.015	pfscan_Ig-like_dom	pfscan_Ig-like_dom	-	no_errors	IGSF23	HGNC	ENSG00000216588	tier1	-	-	69	0	0.00	6	41	87.23
IL12RB1	0	genome.wustl.edu	37	19	18170809	18170809	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	18170809	18170809	G	T	SNP	IL12RB1	ENST00000593993	human	ensembl	74_37	-1	known	silent	c.1878	p.G626	0.000	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL12RB1	HGNC	ENSG00000096996	tier1	-	-	25	0	0.00	24	14	36.84
IL1RAPL1	0	genome.wustl.edu	37	X	29301329	29301329	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	X	29301329	29301329	C	A	SNP	IL1RAPL1	ENST00000302196	human	ensembl	74_37	+1	known	silent	c.357	p.V119	0.989	smart_Ig_sub,pfscan_Ig-like_dom	pfam_TIR_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_TIR_dom,smart_Ig_sub,smart_Ig_sub2,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom	-	no_errors	IL1RAPL1	HGNC	ENSG00000169306	tier1	-	-	17	0	0.00	2	25	92.59
IL1RAPL2	0	genome.wustl.edu	37	X	104992962	104992962	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	X	104992962	104992962	A	C	SNP	IL1RAPL2	ENST00000344799	human	ensembl	74_37	+1	known	missense	c.1058	p.Y353S	1.000	NULL	pfam_TIR_dom,superfamily_TIR_dom,smart_Ig_sub,smart_TIR_dom,pfscan_TIR_dom,pfscan_Ig-like_dom,prints_IL-1_rcpt_II-typ	-	no_errors	IL1RAPL2	HGNC	ENSG00000189108	tier1	-	-	40	0	0.00	3	44	93.62
IMPG1	0	genome.wustl.edu	37	6	76640719	76640719	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	76640719	76640719	G	T	SNP	IMPG1	ENST00000369950	human	ensembl	74_37	-1	known	missense	c.2194	p.P732T	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	IMPG1	HGNC	ENSG00000112706	tier1	-	-	44	0	0.00	30	16	34.78
INHBE	0	genome.wustl.edu	37	12	57850479	57850479	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	57850479	57850479	C	T	SNP	INHBE	ENST00000266646	human	ensembl	74_37	+1	known	missense	c.901	p.L301F	1.000	pfam_TGF-b_C,smart_TGF-b_C	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_betaC,prints_Inhibin_asu	-	no_errors	INHBE	HGNC	ENSG00000139269	tier1	-	-	18	0	0.00	13	10	41.67
INPP5F	0	genome.wustl.edu	37	10	121565957	121565957	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	10	121565957	121565957	C	T	SNP	INPP5F	ENST00000361976	human	ensembl	74_37	+1	known	nonsense	c.1405	p.Q469*	1.000	pfscan_Syja_N	pfam_Syja_N,pfam_Inositol_phosphatase,pfscan_Syja_N	-	no_errors	INPP5F	HGNC	ENSG00000198825	tier1	-	-	47	0	0.00	3	21	87.50
ITGAD	0	genome.wustl.edu	37	16	31426246	31426246	+	Silent	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	31426246	31426246	C	G	SNP	ITGAD	ENST00000389202	human	ensembl	74_37	+1	known	silent	c.2217	p.P739	0.102	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGAD	HGNC	ENSG00000156886	tier1	-	-	41	0	0.00	25	20	44.44
ITK	0	genome.wustl.edu	37	5	156679678	156679678	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	156679678	156679678	C	A	SNP	ITK	ENST00000422843	human	ensembl	74_37	+1	known	nonsense	c.1853	p.S618*	0.388	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_Znf_Btk_motif,pfam_SH3_domain,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_Znf_Btk_motif,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Znf_Btk_motif,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ITK	HGNC	ENSG00000113263	tier1	-	-	37	0	0.00	0	14	100.00
JAKMIP1	0	genome.wustl.edu	37	4	6050609	6050609	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	6050609	6050609	C	A	SNP	JAKMIP1	ENST00000409021	human	ensembl	74_37	-1	known	missense	c.2003	p.G668V	1.000	NULL	NULL	-	no_errors	JAKMIP1	HGNC	ENSG00000152969	tier1	-	-	54	0	0.00	4	25	86.21
JAKMIP1	0	genome.wustl.edu	37	4	6050610	6050610	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	6050610	6050610	C	A	SNP	JAKMIP1	ENST00000409021	human	ensembl	74_37	-1	known	nonsense	c.2002	p.G668*	0.991	NULL	NULL	-	no_errors	JAKMIP1	HGNC	ENSG00000152969	tier1	-	-	56	0	0.00	4	24	85.71
JMJD6	0	genome.wustl.edu	37	17	74714728	74714728	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	74714728	74714728	C	T	SNP	JMJD6	ENST00000585429	human	ensembl	74_37	-1	putative	missense	c.1156	p.D386N	0.004	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD6	HGNC	ENSG00000070495	tier1	-	-	30	0	0.00	40	10	20.00
JMJD6	0	genome.wustl.edu	37	17	74714927	74714927	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	74714927	74714927	C	G	SNP	JMJD6	ENST00000445478	human	ensembl	74_37	-1	known	missense	c.1096	p.E366Q	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	JMJD6	HGNC	ENSG00000070495	tier1	-	-	61	0	0.00	92	39	29.77
KANK1	0	genome.wustl.edu	37	9	734666	734666	+	RNA	DEL	A	A	-			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	9	734666	734666	A	-	DEL	KANK1	ENST00000489369	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	KANK1	HGNC	ENSG00000107104	tier1			33	0	0.00	12	4	25.00
KDELC1	0	genome.wustl.edu	37	13	103443452	103443452	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	13	103443452	103443452	C	A	SNP	KDELC1	ENST00000376004	human	ensembl	74_37	-1	known	silent	c.882	p.T294	0.192	pfam_LipoPS_modifying,smart_LipoPS_modifying	pfam_LipoPS_modifying,pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,smart_LipoPS_modifying,pfscan_Filamin/ABP280_repeat-like	-	no_errors	KDELC1	HGNC	ENSG00000134901	tier1	-	-	19	0	0.00	3	14	82.35
KIAA1324L	0	genome.wustl.edu	37	7	86577054	86577054	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	86577054	86577054	G	C	SNP	KIAA1324L	ENST00000450689	human	ensembl	74_37	-1	known	missense	c.495	p.D165E	0.988	superfamily_Growth_fac_rcpt_N_dom	superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_Growth_fac_rcpt_N_dom	-	no_errors	KIAA1324L	HGNC	ENSG00000164659	tier1	-	-	17	0	0.00	12	11	47.83
KIF13B	0	genome.wustl.edu	37	8	28981543	28981543	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	8	28981543	28981543	C	A	SNP	KIF13B	ENST00000524189	human	ensembl	74_37	-1	known	missense	c.3350	p.R1117L	0.960	NULL	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_CAP-Gly_domain,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_CAP-Gly_domain,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_CAP-Gly_domain,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13B	HGNC	ENSG00000197892				33	0	0.00	27	2	6.90
KIF17	0	genome.wustl.edu	37	1	20990952	20990952	+	RNA	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	20990952	20990952	G	C	SNP	KIF17	ENST00000477167	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.077	-	-	-	no_errors	KIF17	HGNC	ENSG00000117245	tier1	-	-	19	0	0.00	13	10	43.48
KIR3DX1	0	genome.wustl.edu	37	19	55053772	55053772	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	55053772	55053772	G	T	SNP	KIR3DX1	ENST00000221567	human	ensembl	74_37	+1	known	missense	c.1040	p.C347F	0.000	NULL	pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	KIR3DX1	HGNC	ENSG00000104970	tier1	-	-	61	0	0.00	28	22	44.00
KNDC1	0	genome.wustl.edu	37	10	135015190	135015190	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	10	135015190	135015190	G	T	SNP	KNDC1	ENST00000368572	human	ensembl	74_37	+1	known	missense	c.3181	p.G1061W	0.000	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,superfamily_Kinase-like_dom,smart_KIND,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	KNDC1	HGNC	ENSG00000171798	tier1	-	-	20	0	0.00	7	11	61.11
KRTAP5-11	0	genome.wustl.edu	37	11	71293036	71293036	+	RNA	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	71293036	71293036	G	T	SNP	KRTAP5-11	ENST00000526239	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KRTAP5-11	HGNC	ENSG00000204571	tier1	-	-	11	0	0.00	14	25	64.10
LAMA5	0	genome.wustl.edu	37	20	60895671	60895671	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	20	60895671	60895671	C	A	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.6703	p.V2235L	0.000	pfam_Laminin_I	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	tier1	-	-	22	0	0.00	13	4	23.53
LCP1	0	genome.wustl.edu	37	13	46718648	46718648	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	13	46718648	46718648	C	A	SNP	LCP1	ENST00000323076	human	ensembl	74_37	-1	known	silent	c.1182	p.T394	0.005	superfamily_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_EF_hand_dom,pfam_CAMSAP_CH,superfamily_CH-domain,smart_EF_hand_dom,smart_CH-domain,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	LCP1	HGNC	ENSG00000136167	tier1	-	-	54	0	0.00	42	26	38.24
LDHAL6CP	0	genome.wustl.edu	37	12	63397777	63397777	+	RNA	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	63397777	63397777	C	G	SNP	LDHAL6CP	ENST00000550738	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LDHAL6CP	HGNC	ENSG00000250517	tier1	-	-	26	0	0.00	15	17	51.52
LILRB1	0	genome.wustl.edu	37	19	55144634	55144634	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	55144634	55144634	C	G	SNP	LILRB1	ENST00000324602	human	ensembl	74_37	+1	known	missense	c.1126	p.Q376E	0.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRB1	HGNC	ENSG00000104972	tier1	-	-	66	0	0.00	77	5	6.10
LILRB1	0	genome.wustl.edu	37	19	55147341	55147341	+	RNA	SNP	A	A	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	55147341	55147341	A	G	SNP	LILRB1	ENST00000462628	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LILRB1	HGNC	ENSG00000104972	tier1	rs201477561	-	24	0	0.00	35	7	16.67
LOC100133091	0	genome.wustl.edu	37	7	76178978	76178978	+	RNA	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	76178978	76178978	G	C	SNP	LOC100133091	ENST00000418663	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.918	-	-	-	no_errors	AC004980.7	Clone_based_vega_gene	ENSG00000205485	tier1	-	-	16	0	0.00	3	13	81.25
LOC100996870	0	genome.wustl.edu	37	9	66466602	66466602	+	RNA	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	9	66466602	66466602	C	T	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113	tier1	-	-	8	0	0.00	5	5	50.00
LOC101927345	0	genome.wustl.edu	37	1	143394128	143394128	+	RNA	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	143394128	143394128	C	A	SNP	LOC101927345	ENST00000415543	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261	tier1	-	-	173	0	0.00	268	33	10.93
LOXHD1	0	genome.wustl.edu	37	18	44125297	44125297	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	18	44125297	44125297	C	G	SNP	LOXHD1	ENST00000536736	human	ensembl	74_37	-1	known	missense	c.3602	p.G1201A	1.000	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom	-	no_errors	LOXHD1	HGNC	ENSG00000167210	tier1	-	-	77	0	0.00	8	33	80.49
LPCAT2	0	genome.wustl.edu	37	16	55616969	55616969	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	55616969	55616969	G	C	SNP	LPCAT2	ENST00000262134	human	ensembl	74_37	+1	known	missense	c.1594	p.E532Q	0.994	NULL	pfam_EF_hand_dom,pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	LPCAT2	HGNC	ENSG00000087253	tier1	-	-	34	0	0.00	17	12	41.38
LRP1B	0	genome.wustl.edu	37	2	141816620	141816620	+	Nonsense_Mutation	SNP	T	T	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	141816620	141816620	T	A	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	nonsense	c.1240	p.R414*	0.956	pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	16	0	0.00	3	7	70.00
LRRC37A3	0	genome.wustl.edu	37	17	62856576	62856576	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	62856576	62856576	C	G	SNP	LRRC37A3	ENST00000319651	human	ensembl	74_37	-1	known	missense	c.3688	p.A1230P	0.001	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC37A3	HGNC	ENSG00000176809	tier1	-	-	61	0	0.00	62	26	29.55
LRRC4B	0	genome.wustl.edu	37	19	51021614	51021614	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	51021614	51021614	G	C	SNP	LRRC4B	ENST00000389201	human	ensembl	74_37	-1	known	missense	c.1356	p.N452K	1.000	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRC4B	HGNC	ENSG00000131409	tier1	-	-	48	0	0.00	14	31	68.89
LRRC63	0	genome.wustl.edu	37	13	46808427	46808427	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	13	46808427	46808427	G	T	SNP	LRRC63	ENST00000446175	human	ensembl	74_37	+1	known	missense	c.933	p.M311I	0.011	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC63	HGNC	ENSG00000173988	tier1	-	-	39	0	0.00	31	29	48.33
MAB21L2	0	genome.wustl.edu	37	4	151504491	151504491	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	151504491	151504491	G	A	SNP	MAB21L2	ENST00000317605	human	ensembl	74_37	+1	known	missense	c.310	p.D104N	1.000	pfam_Mab-21_dom	pfam_Mab-21_dom,pfscan_Ricin_B_lectin	-	no_errors	MAB21L2	HGNC	ENSG00000181541	tier1	-	-	32	0	0.00	11	15	57.69
MAGEB6	0	genome.wustl.edu	37	X	26212334	26212334	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	X	26212334	26212334	A	C	SNP	MAGEB6	ENST00000379034	human	ensembl	74_37	+1	known	missense	c.371	p.Y124S	0.000	pfam_Melanoma_ass_antigen_N	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB6	HGNC	ENSG00000176746	tier1	rs143802048	-	29	0	0.00	4	29	87.88
MAGEL2	0	genome.wustl.edu	37	15	23889959	23889959	+	Silent	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	15	23889959	23889959	C	T	SNP	MAGEL2	ENST00000532292	human	ensembl	74_37	-1	known	silent	c.1122	p.R374	0.001	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEL2	HGNC	ENSG00000254585	tier1	-	-	12	0	0.00	9	5	35.71
MAGI2	0	genome.wustl.edu	37	7	77797398	77797398	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	77797398	77797398	C	A	SNP	MAGI2	ENST00000354212	human	ensembl	74_37	-1	known	missense	c.2431	p.G811C	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI2	HGNC	ENSG00000187391	tier1	-	-	75	0	0.00	40	37	48.05
MALAT1	0	genome.wustl.edu	37	11	65266761	65266761	+	RNA	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	65266761	65266761	C	G	SNP	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562	tier1	-	-	53	0	0.00	60	4	6.25
MARCH1	0	genome.wustl.edu	37	4	164533852	164533852	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	164533852	164533852	G	T	SNP	MARCH1	ENST00000514618	human	ensembl	74_37	-1	novel	missense	c.581	p.P194Q	0.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	MARCH1	HGNC	ENSG00000145416	tier1	-	-	51	0	0.00	49	23	31.94
MARVELD2	0	genome.wustl.edu	37	5	68715944	68715944	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	68715944	68715944	G	T	SNP	MARVELD2	ENST00000325631	human	ensembl	74_37	+1	known	silent	c.732	p.G244	0.998	pfam_Marvel	pfam_Occludin_RNApol2_elong_fac_ELL,pfam_Marvel	-	no_errors	MARVELD2	HGNC	ENSG00000152939	tier1	-	-	85	0	0.00	10	44	81.48
MCL1	0	genome.wustl.edu	37	1	150550893	150550893	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	150550893	150550893	T	G	SNP	MCL1	ENST00000369026	human	ensembl	74_37	-1	known	missense	c.763	p.S255R	1.000	pfam_Blc2_fam,pfscan_Bcl2-like,prints_Apop_reg_Mc1,prints_Blc2_fam	pfam_Blc2_fam,pfscan_Bcl2-like,prints_Apop_reg_Mc1,prints_Blc2_fam	-	no_errors	MCL1	HGNC	ENSG00000143384	tier1	-	-	41	0	0.00	22	12	35.29
MEOX1	0	genome.wustl.edu	37	17	41738714	41738714	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	41738714	41738714	T	A	SNP	MEOX1	ENST00000549132	human	ensembl	74_37	-1	known	missense	c.101	p.Q34L	0.394	NULL	superfamily_Homeodomain-like,pfscan_Homeobox_dom	-	no_errors	MEOX1	HGNC	ENSG00000005102	tier1	-	-	54	0	0.00	30	36	54.55
METTL3	0	genome.wustl.edu	37	14	21971933	21971933	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	14	21971933	21971933	G	T	SNP	METTL3	ENST00000298717	human	ensembl	74_37	-1	known	missense	c.192	p.S64R	0.985	NULL	pfam_MT-A70-like,pfscan_MT-A70-like	-	no_errors	METTL3	HGNC	ENSG00000165819				36	0	0.00	53	3	5.36
MICAL1	0	genome.wustl.edu	37	6	109767598	109767598	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	109767598	109767598	A	T	SNP	MICAL1	ENST00000368952	human	ensembl	74_37	-1	known	missense	c.2379	p.S793R	0.000	NULL	pfam_DUF3585,pfam_CH-domain,pfam_Znf_LIM,pfam_mOase_FAD-bd,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICAL1	HGNC	ENSG00000135596	tier1	-	-	50	0	0.00	42	36	46.15
MIR770	0	genome.wustl.edu	37	14	101318813	101318813	+	RNA	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	14	101318813	101318813	G	T	SNP	MIR770	ENST00000390219	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.924	-	-	-	no_errors	MIR770	HGNC	ENSG00000211574	tier1	-	-	18	0	0.00	19	12	38.71
MKRN3	0	genome.wustl.edu	37	15	23811871	23811871	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	15	23811871	23811871	C	A	SNP	MKRN3	ENST00000314520	human	ensembl	74_37	+1	known	nonsense	c.942	p.C314*	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,smart_Znf_CCCH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	MKRN3	HGNC	ENSG00000179455	tier1	-	-	32	0	0.00	17	23	57.50
MKX	0	genome.wustl.edu	37	10	28023695	28023695	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	10	28023695	28023695	G	C	SNP	MKX	ENST00000375790	human	ensembl	74_37	-1	known	missense	c.528	p.H176Q	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	MKX	HGNC	ENSG00000150051	tier1	-	-	56	0	0.00	29	22	43.14
MROH7-TTC4	0	genome.wustl.edu	37	1	55118958	55118958	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	55118958	55118958	G	A	SNP	MROH7-TTC4	ENST00000414150	human	ensembl	74_37	+1	known	missense	c.359	p.R120H	0.000	NULL	superfamily_ARM-type_fold	-	no_errors	MROH7-TTC4	HGNC	ENSG00000271723	tier1	-	-	21	0	0.00	13	10	43.48
MTCH1	0	genome.wustl.edu	37	6	36938400	36938400	+	RNA	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	36938400	36938400	G	A	SNP	MTCH1	ENST00000492754	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MTCH1	HGNC	ENSG00000137409	tier1	-	-	13	0	0.00	15	9	37.50
MTMR3	0	genome.wustl.edu	37	22	30414035	30414035	+	Silent	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	22	30414035	30414035	C	T	SNP	MTMR3	ENST00000401950	human	ensembl	74_37	+1	known	silent	c.1794	p.T598	0.993	NULL	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Tyr_Pase_cat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	MTMR3	HGNC	ENSG00000100330	tier1	-	-	64	0	0.00	38	15	28.30
MTRR	0	genome.wustl.edu	37	5	7897311	7897311	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	7897311	7897311	C	T	SNP	MTRR	ENST00000264668	human	ensembl	74_37	+1	known	nonsense	c.1984	p.Q662*	0.315	pfam_OxRdtase_FAD/NAD-bd	pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_Riboflavin_synthase-like_b-brl,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	MTRR	HGNC	ENSG00000124275				40	0	0.00	72	4	5.26
MTUS2	0	genome.wustl.edu	37	13	30072650	30072650	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	13	30072650	30072650	G	C	SNP	MTUS2	ENST00000431530	human	ensembl	74_37	+1	known	missense	c.3804	p.K1268N	1.000	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938	tier1	-	-	10	0	0.00	13	18	58.06
MYADML	0	genome.wustl.edu	37	2	33952528	33952528	+	RNA	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	33952528	33952528	G	T	SNP	MYADML	ENST00000474610	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MYADML	HGNC	ENSG00000239649	tier1	-	-	25	0	0.00	21	33	61.11
MYCBP2	0	genome.wustl.edu	37	13	77673124	77673124	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	13	77673124	77673124	G	A	SNP	MYCBP2	ENST00000407578	human	ensembl	74_37	-1	known	missense	c.8165	p.S2722F	0.531	superfamily_ARM-type_fold	pfam_PHR,pfam_Reg_chr_condens,pfam_Filamin/ABP280_repeat-like,superfamily_RCC1/BLIP-II,superfamily_Galactose-bd-like,superfamily_Ig_E-set,superfamily_ARM-type_fold,smart_Znf_RING,pfscan_Filamin/ABP280_repeat-like,pfscan_Znf_RING,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	MYCBP2	HGNC	ENSG00000005810	tier1	-	-	70	0	0.00	11	29	70.73
MYF6	0	genome.wustl.edu	37	12	81102703	81102704	+	Frame_Shift_Ins	INS	-	-	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	81102703	81102704	-	A	INS	MYF6	ENST00000228641	human	ensembl	74_37	+1	known	frame_shift_ins	c.693_694	p.L232fs	1.000:1.000	NULL	pfam_Basic,pfam_bHLH_dom,superfamily_bHLH_dom,smart_Basic,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MYF6	HGNC	ENSG00000111046	tier1			65	0	0.00	50	36	41.86
MYH13	0	genome.wustl.edu	37	17	10219245	10219245	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	10219245	10219245	A	T	SNP	MYH13	ENST00000252172	human	ensembl	74_37	-1	known	missense	c.3836	p.M1279K	0.998	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH13	HGNC	ENSG00000006788	tier1	-	-	70	0	0.00	30	29	49.15
MYLK	0	genome.wustl.edu	37	3	123419172	123419172	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	123419172	123419172	T	C	SNP	MYLK	ENST00000360304	human	ensembl	74_37	-1	known	missense	c.3143	p.K1048R	0.003	NULL	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	MYLK	HGNC	ENSG00000065534	tier1	-	-	48	0	0.00	11	16	59.26
NAA11	0	genome.wustl.edu	37	4	80246777	80246777	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	80246777	80246777	G	T	SNP	NAA11	ENST00000286794	human	ensembl	74_37	-1	known	silent	c.255	p.G85	1.000	pfam_GNAT_dom,pfam_FR47,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	pfam_GNAT_dom,pfam_FR47,superfamily_Acyl_CoA_acyltransferase,pfscan_GNAT_dom	-	no_errors	NAA11	HGNC	ENSG00000156269	tier1	-	-	36	0	0.00	16	11	40.74
NCAPH	0	genome.wustl.edu	37	2	97008912	97008912	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	97008912	97008912	G	T	SNP	NCAPH	ENST00000240423	human	ensembl	74_37	+1	known	silent	c.465	p.A155	0.608	pfam_Condensin_barren_su2,pirsf_Condensin_barren_su2	pfam_Condensin_barren_su2,pirsf_Condensin_barren_su2	-	no_errors	NCAPH	HGNC	ENSG00000121152	tier1	-	-	42	0	0.00	27	20	42.55
NCOA3	0	genome.wustl.edu	37	20	46256687	46256687	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	20	46256687	46256687	G	T	SNP	NCOA3	ENST00000371998	human	ensembl	74_37	+1	known	missense	c.743	p.C248F	1.000	pirsf_Nuclear_rcpt_coactivator	pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_SRC-1,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA3	HGNC	ENSG00000124151	tier1	-	-	22	0	0.00	16	17	51.52
NDC80	0	genome.wustl.edu	37	18	2590098	2590098	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	18	2590098	2590098	G	T	SNP	NDC80	ENST00000261597	human	ensembl	74_37	+1	known	nonsense	c.952	p.E318*	1.000	NULL	pfam_Kinetochore_Ndc80,superfamily_t-SNARE	-	no_errors	NDC80	HGNC	ENSG00000080986	tier1	-	-	36	0	0.00	36	16	30.77
NDUFC1	0	genome.wustl.edu	37	4	140216938	140216938	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	140216938	140216938	G	A	SNP	NDUFC1	ENST00000265500	human	ensembl	74_37	-1	known	silent	c.15	p.A5	0.000	NULL	NULL	-	no_errors	NDUFC1	HGNC	ENSG00000109390				13	0	0.00	1	6	85.71
NEGR1	0	genome.wustl.edu	37	1	72241972	72241972	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	72241972	72241972	T	G	SNP	NEGR1	ENST00000357731	human	ensembl	74_37	-1	known	missense	c.418	p.K140Q	1.000	pfam_Ig_I-set,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	NEGR1	HGNC	ENSG00000172260	tier1	-	-	32	0	0.00	12	18	60.00
NELL2	0	genome.wustl.edu	37	12	45059341	45059341	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	45059341	45059341	C	T	SNP	NELL2	ENST00000437801	human	ensembl	74_37	-1	known	missense	c.1520	p.C507Y	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_VWF_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_VWC_out,smart_VWF_C,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	NELL2	HGNC	ENSG00000184613				24	0	0.00	27	2	6.90
NINJ1	0	genome.wustl.edu	37	9	95888702	95888702	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	9	95888702	95888702	G	A	SNP	NINJ1	ENST00000375446	human	ensembl	74_37	-1	known	silent	c.294	p.L98	1.000	pfam_Ninjurin	pfam_Ninjurin	-	no_errors	NINJ1	HGNC	ENSG00000131669	tier1	-	-	26	0	0.00	1	13	92.86
NIPBL	0	genome.wustl.edu	37	5	37014784	37014784	+	Splice_Site	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	37014784	37014784	G	T	SNP	NIPBL	ENST00000282516	human	ensembl	74_37	+1	known	splice_site	c.4561-1	e21-1	1.000	-	-	-	no_errors	NIPBL	HGNC	ENSG00000164190	tier1	-	-	24	0	0.00	29	13	30.95
NOL12	0	genome.wustl.edu	37	22	38083951	38083951	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	22	38083951	38083951	G	T	SNP	NOL12	ENST00000359114	human	ensembl	74_37	+1	known	nonsense	c.118	p.E40*	1.000	pfam_Nucleolar_protein_12	pfam_Nucleolar_protein_12	-	no_errors	NOL12	HGNC	ENSG00000100101	tier1	-	-	36	0	0.00	30	25	45.45
NOTCH3	0	genome.wustl.edu	37	19	15285174	15285174	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	15285174	15285174	C	A	SNP	NOTCH3	ENST00000263388	human	ensembl	74_37	-1	known	missense	c.4441	p.D1481Y	0.996	pirsf_Notch,pfam_Notch_dom,superfamily_Notch_dom,smart_Notch_dom,pfscan_Notch_dom	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_dom,pfam_Notch_NODP_dom,pfam_Notch_NOD_dom,pfam_EGF_extracell,pfam_DUF3454_notch,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_3,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH3	HGNC	ENSG00000074181	tier1	-	-	31	0	0.00	24	14	36.84
NPAP1	0	genome.wustl.edu	37	15	24922115	24922115	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	15	24922115	24922115	C	A	SNP	NPAP1	ENST00000329468	human	ensembl	74_37	+1	known	missense	c.1101	p.H367Q	0.000	NULL	NULL	-	no_errors	NPAP1	HGNC	ENSG00000185823	tier1	-	-	18	0	0.00	12	9	42.86
NRK	0	genome.wustl.edu	37	X	105125725	105125725	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	X	105125725	105125725	C	G	SNP	NRK	ENST00000428173	human	ensembl	74_37	+1	known	missense	c.205	p.R69G	0.704	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Citron,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Citron,pfscan_Prot_kinase_dom	-	no_errors	NRK	HGNC	ENSG00000123572	tier1	-	-	52	0	0.00	9	45	83.33
NRXN1	0	genome.wustl.edu	37	2	50280637	50280637	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	50280637	50280637	C	A	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	silent	c.3876	p.L1292	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	44	0	0.00	57	27	31.76
NRXN3	0	genome.wustl.edu	37	14	80328302	80328302	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	14	80328302	80328302	G	T	SNP	NRXN3	ENST00000335750	human	ensembl	74_37	+1	known	missense	c.3181	p.V1061L	1.000	NULL	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645	tier1	-	-	10	0	0.00	7	4	36.36
NUAK2	0	genome.wustl.edu	37	1	205275371	205275371	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	205275371	205275371	C	G	SNP	NUAK2	ENST00000367157	human	ensembl	74_37	-1	known	missense	c.635	p.S212T	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NUAK2	HGNC	ENSG00000163545	tier1	-	-	51	0	0.00	4	26	86.67
NUCB2	0	genome.wustl.edu	37	11	17333611	17333611	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	17333611	17333611	G	T	SNP	NUCB2	ENST00000323688	human	ensembl	74_37	+1	known	missense	c.856	p.D286Y	1.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	NUCB2	HGNC	ENSG00000070081	tier1	-	-	77	0	0.00	11	103	90.35
NUTM2A	0	genome.wustl.edu	37	10	88994911	88994911	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	10	88994911	88994911	G	A	SNP	NUTM2A	ENST00000381689	human	ensembl	74_37	+1	novel	silent	c.1889	p.*630	0.004	NULL	NULL	-	no_errors	NUTM2A	HGNC	ENSG00000184923	tier1	-	-	96	0	0.00	7	45	86.54
OBP2A	0	genome.wustl.edu	37	9	138439805	138439805	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	9	138439805	138439805	G	C	SNP	OBP2A	ENST00000342114	human	ensembl	74_37	+1	known	missense	c.232	p.A78P	0.000	NULL	superfamily_Calycin-like	-	no_errors	OBP2A	HGNC	ENSG00000122136	tier1	-	-	15	0	0.00	2	10	83.33
OBSCN	0	genome.wustl.edu	37	1	228470840	228470840	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	228470840	228470840	G	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.8592	p.K2864N	0.986	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1	-	-	37	0	0.00	8	13	61.90
OGDHL	0	genome.wustl.edu	37	10	50951964	50951964	+	RNA	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	10	50951964	50951964	C	A	SNP	OGDHL	ENST00000496884	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	OGDHL	HGNC	ENSG00000197444	tier1	-	-	11	0	0.00	1	11	91.67
OR12D3	0	genome.wustl.edu	37	6	29342679	29342679	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	29342679	29342679	C	T	SNP	OR12D3	ENST00000396806	human	ensembl	74_37	-1	known	missense	c.386	p.R129H	0.349	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR12D3	HGNC	ENSG00000112462	tier1	-	-	29	0	0.00	33	18	35.29
OR2J2	0	genome.wustl.edu	37	6	29142185	29142185	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	29142185	29142185	G	T	SNP	OR2J2	ENST00000377167	human	ensembl	74_37	+1	known	missense	c.773	p.C258F	0.005	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2J2	HGNC	ENSG00000204700	tier1	-	-	67	0	0.00	50	47	48.45
OR2T2	0	genome.wustl.edu	37	1	248617052	248617052	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	248617052	248617052	G	T	SNP	OR2T2	ENST00000342927	human	ensembl	74_37	+1	known	silent	c.954	p.A318	0.001	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T2	HGNC	ENSG00000196240	tier1	-	-	58	0	0.00	8	28	77.78
OR5T2	0	genome.wustl.edu	37	11	56000131	56000131	+	Silent	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	56000131	56000131	G	C	SNP	OR5T2	ENST00000313264	human	ensembl	74_37	-1	known	silent	c.531	p.P177	0.002	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5T2	HGNC	ENSG00000181718	tier1	-	-	71	0	0.00	66	47	41.59
OR6C65	0	genome.wustl.edu	37	12	55794493	55794493	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	55794493	55794493	C	T	SNP	OR6C65	ENST00000379665	human	ensembl	74_37	+1	known	missense	c.181	p.L61F	0.972	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR6C65	HGNC	ENSG00000205328	tier1	-	-	21	0	0.00	21	11	34.38
OR6T1	0	genome.wustl.edu	37	11	123814164	123814164	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	123814164	123814164	G	A	SNP	OR6T1	ENST00000321252	human	ensembl	74_37	-1	known	nonsense	c.382	p.R128*	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6T1	HGNC	ENSG00000181499	tier1	-	-	41	0	0.00	33	50	60.24
OR8K5	0	genome.wustl.edu	37	11	55927473	55927473	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	55927473	55927473	G	C	SNP	OR8K5	ENST00000313447	human	ensembl	74_37	-1	known	missense	c.321	p.F107L	0.026	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8K5	HGNC	ENSG00000181752	tier1	-	-	27	0	0.00	23	23	50.00
OTOGL	0	genome.wustl.edu	37	12	80615872	80615872	+	Silent	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	80615872	80615872	C	T	SNP	OTOGL	ENST00000458043	human	ensembl	74_37	+1	known	silent	c.309	p.I103	0.892	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_AbfB,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	OTOGL	HGNC	ENSG00000165899	tier1	-	-	12	0	0.00	15	14	48.28
OVCH1	0	genome.wustl.edu	37	12	29617440	29617440	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	29617440	29617440	C	A	SNP	OVCH1	ENST00000318184	human	ensembl	74_37	-1	known	missense	c.2125	p.D709Y	0.993	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,smart_Peptidase_S1,smart_CUB_dom,pfscan_CUB_dom,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	OVCH1	HGNC	ENSG00000187950	tier1	-	-	36	0	0.00	22	30	57.69
PALM2-AKAP2	0	genome.wustl.edu	37	9	112898644	112898644	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	9	112898644	112898644	G	C	SNP	PALM2-AKAP2	ENST00000374530	human	ensembl	74_37	+1	known	missense	c.820	p.E274Q	0.988	NULL	pfam_Paralemmin,pfam_RII_binding_1	-	no_errors	PALM2-AKAP2	HGNC	ENSG00000157654	tier1	-	-	40	0	0.00	4	24	85.71
PAPPA	0	genome.wustl.edu	37	9	118982241	118982241	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	9	118982241	118982241	G	T	SNP	PAPPA	ENST00000328252	human	ensembl	74_37	+1	known	silent	c.1944	p.T648	0.995	pfam_Peptidase_M43	pfam_Sushi_SCR_CCP,pfam_Notch_dom,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA	HGNC	ENSG00000182752	tier1	-	-	28	0	0.00	3	15	83.33
PAXIP1	0	genome.wustl.edu	37	7	154785468	154785468	+	Silent	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	154785468	154785468	C	T	SNP	PAXIP1	ENST00000397192	human	ensembl	74_37	-1	known	silent	c.228	p.V76	1.000	superfamily_BRCT_dom,pfscan_BRCT_dom	pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	PAXIP1	HGNC	ENSG00000157212	tier1	-	-	17	0	0.00	2	9	81.82
PCDH15	0	genome.wustl.edu	37	10	56106232	56106232	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	10	56106232	56106232	C	A	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	missense	c.487	p.G163C	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275	tier1	-	-	48	0	0.00	4	29	87.88
PCDHA2	0	genome.wustl.edu	37	5	140176748	140176748	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	140176748	140176748	G	A	SNP	PCDHA2	ENST00000526136	human	ensembl	74_37	+1	known	silent	c.2199	p.A733	0.022	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA2	HGNC	ENSG00000204969	tier1	-	-	51	0	0.00	37	25	40.32
PCDHA9	0	genome.wustl.edu	37	5	140229769	140229769	+	Silent	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	140229769	140229769	G	C	SNP	PCDHA9	ENST00000532602	human	ensembl	74_37	+1	known	silent	c.1689	p.P563	0.005	superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA9	HGNC	ENSG00000204961	tier1	-	-	92	0	0.00	42	48	53.33
PCDHAC2	0	genome.wustl.edu	37	5	140347251	140347251	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	140347251	140347251	G	T	SNP	PCDHAC2	ENST00000289269	human	ensembl	74_37	+1	known	silent	c.900	p.T300	0.005	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHAC2	HGNC	ENSG00000243232	tier1	-	-	20	0	0.00	9	14	60.87
PCDHB13	0	genome.wustl.edu	37	5	140594187	140594187	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	140594187	140594187	C	A	SNP	PCDHB13	ENST00000341948	human	ensembl	74_37	+1	known	silent	c.492	p.G164	0.003	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB13	HGNC	ENSG00000187372	tier1	-	-	35	0	0.00	25	24	48.98
PCDHB6	0	genome.wustl.edu	37	5	140531971	140531971	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	140531971	140531971	G	T	SNP	PCDHB6	ENST00000231136	human	ensembl	74_37	+1	known	silent	c.2133	p.L711	0.998	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB6	HGNC	ENSG00000113211	tier1	-	-	138	0	0.00	80	54	40.30
PCDHB7	0	genome.wustl.edu	37	5	140554449	140554449	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	140554449	140554449	C	A	SNP	PCDHB7	ENST00000231137	human	ensembl	74_37	+1	known	missense	c.2033	p.P678Q	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB7	HGNC	ENSG00000113212	tier1	-	-	116	0	0.00	74	47	38.84
PCDHGC5	0	genome.wustl.edu	37	5	140869552	140869552	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	140869552	140869552	G	T	SNP	PCDHGC5	ENST00000252087	human	ensembl	74_37	+1	known	missense	c.745	p.V249L	1.000	superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGC5	HGNC	ENSG00000240764	tier1	-	-	53	0	0.00	25	19	43.18
PCNT	0	genome.wustl.edu	37	21	47775526	47775526	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	21	47775526	47775526	G	T	SNP	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	nonsense	c.1921	p.E641*	0.002	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299	tier1	-	-	29	0	0.00	15	16	51.61
PCNT	0	genome.wustl.edu	37	21	47775529	47775529	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	21	47775529	47775529	G	A	SNP	PCNT	ENST00000359568	human	ensembl	74_37	+1	known	missense	c.1924	p.G642R	0.000	NULL	pfam_PACT_domain	-	no_errors	PCNT	HGNC	ENSG00000160299	tier1	-	-	26	0	0.00	16	14	46.67
PCSK5	0	genome.wustl.edu	37	9	78547359	78547359	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	9	78547359	78547359	C	G	SNP	PCSK5	ENST00000545128	human	ensembl	74_37	+1	known	missense	c.257	p.S86W	0.999	superfamily_Prot_inh_propept	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Growth_fac_rcpt_N_dom,superfamily_Prot_inh_propept,smart_Furin_repeat,smart_EG-like_dom,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK5	HGNC	ENSG00000099139	tier1	-	-	50	0	0.00	5	34	87.18
PEX5L	0	genome.wustl.edu	37	3	179519471	179519471	+	RNA	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	179519471	179519471	C	T	SNP	PEX5L	ENST00000467440	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.099	-	-	-	no_errors	PEX5L	HGNC	ENSG00000114757	tier1	-	-	48	0	0.00	104	33	24.09
PHF2	0	genome.wustl.edu	37	9	96438978	96438979	+	Frame_Shift_Ins	INS	-	-	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	9	96438978	96438979	-	G	INS	PHF2	ENST00000359246	human	ensembl	74_37	+1	known	frame_shift_ins	c.2935_2936	p.T979fs	0.993:1.000	NULL	pfam_JmjC_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_JmjC_dom,pfscan_JmjC_dom,pfscan_Znf_PHD-finger	-	no_errors	PHF2	HGNC	ENSG00000197724	tier1			45	0	0.00	18	3	14.29
PHF21B	0	genome.wustl.edu	37	22	45309806	45309806	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	22	45309806	45309806	C	G	SNP	PHF21B	ENST00000313237	human	ensembl	74_37	-1	known	missense	c.727	p.E243Q	0.992	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF21B	HGNC	ENSG00000056487	tier1	-	-	68	0	0.00	58	35	37.63
PIK3R6	0	genome.wustl.edu	37	17	8736255	8736255	+	Silent	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	8736255	8736255	C	T	SNP	PIK3R6	ENST00000311434	human	ensembl	74_37	-1	known	silent	c.753	p.L251	1.000	pfam_PI3K_1B_gamma_p101_su	pfam_PI3K_1B_gamma_p101_su	-	no_errors	PIK3R6	HGNC	ENSG00000174083	tier1	-	-	62	0	0.00	21	18	46.15
PLCZ1	0	genome.wustl.edu	37	12	18889200	18889200	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	18889200	18889200	T	A	SNP	PLCZ1	ENST00000266505	human	ensembl	74_37	-1	known	missense	c.90	p.K30N	0.994	NULL	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCZ1	HGNC	ENSG00000139151	tier1	-	-	64	0	0.00	38	36	48.65
PLEKHG5	0	genome.wustl.edu	37	1	6534123	6534123	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	6534123	6534123	C	A	SNP	PLEKHG5	ENST00000537245	human	ensembl	74_37	-1	known	missense	c.778	p.A260S	0.097	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG5	HGNC	ENSG00000171680	tier1	-	-	34	0	0.00	15	11	42.31
PLS1	0	genome.wustl.edu	37	3	142395088	142395088	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	142395088	142395088	G	A	SNP	PLS1	ENST00000337777	human	ensembl	74_37	+1	known	missense	c.454	p.D152N	0.463	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_EF_hand_dom,superfamily_CH-domain,smart_EF_hand_dom,smart_CH-domain,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	PLS1	HGNC	ENSG00000120756	tier1	-	-	38	0	0.00	59	13	18.06
PLXND1	0	genome.wustl.edu	37	3	129288754	129288754	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	129288754	129288754	C	G	SNP	PLXND1	ENST00000324093	human	ensembl	74_37	-1	known	missense	c.3797	p.G1266A	0.993	NULL	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXND1	HGNC	ENSG00000004399	tier1	-	-	17	0	0.00	2	7	77.78
POLE	0	genome.wustl.edu	37	12	133201572	133201572	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	133201572	133201572	C	A	SNP	POLE	ENST00000320574	human	ensembl	74_37	-1	known	silent	c.6666	p.L2222	0.236	NULL	pfam_DNA_pol_e_suA_C,pfam_DNA-dir_DNA_pol_B_exonuc,pfam_DNA-dir_DNA_pol_B_multi_dom,pfam_3'-5'_exonuclease_PolB-like,superfamily_RNaseH-like_dom,smart_DNA-dir_DNA_pol_B	-	no_errors	POLE	HGNC	ENSG00000177084	tier1	-	-	30	0	0.00	14	15	51.72
POLR1C	0	genome.wustl.edu	37	6	43484854	43484854	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	43484854	43484854	G	T	SNP	POLR1C	ENST00000372389	human	ensembl	74_37	+1	known	missense	c.7	p.A3S	1.000	NULL	pfam_DNA-dir_RNA_pol_insert,pfam_RBP11-like_dimer,superfamily_RBP11-like_dimer,superfamily_DNA-dir_RNA_pol_insert,smart_DNA-dir_RNA_pol_RpoA/D/Rpb3	-	no_errors	POLR1C	HGNC	ENSG00000171453	tier1	-	-	31	0	0.00	21	29	58.00
PPP1CA	0	genome.wustl.edu	37	11	67168163	67168163	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	67168163	67168163	C	A	SNP	PPP1CA	ENST00000312989	human	ensembl	74_37	-1	known	nonsense	c.448	p.E150*	1.000	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP1CA	HGNC	ENSG00000172531	tier1	-	-	31	0	0.00	105	20	16.00
PRIM2	0	genome.wustl.edu	37	6	57372336	57372336	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	57372336	57372336	C	A	SNP	PRIM2	ENST00000607273	human	ensembl	74_37	+1	known	missense	c.742	p.P248T	1.000	pfam_DNA_primase_lsu_euk/arc	pfam_DNA_primase_lsu_euk/arc	-	no_errors	PRIM2	HGNC	ENSG00000146143	tier1	-	-	67	0	0.00	72	13	15.29
PRKCB	0	genome.wustl.edu	37	16	24135161	24135161	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	24135161	24135161	C	A	SNP	PRKCB	ENST00000303531	human	ensembl	74_37	+1	known	silent	c.924	p.A308	1.000	pirsf_Protein_kinase_C_a/b/g	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_C2_dom	-	no_errors	PRKCB	HGNC	ENSG00000166501	tier1	-	-	89	0	0.00	50	31	38.27
PROSER1	0	genome.wustl.edu	37	13	39586248	39586248	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	13	39586248	39586248	G	A	SNP	PROSER1	ENST00000352251	human	ensembl	74_37	-1	known	missense	c.2684	p.A895V	1.000	NULL	NULL	-	no_errors	PROSER1	HGNC	ENSG00000120685	tier1	-	-	28	0	0.00	42	4	8.70
PRR15	0	genome.wustl.edu	37	7	29606258	29606258	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	29606258	29606258	G	T	SNP	PRR15	ENST00000319694	human	ensembl	74_37	+1	known	missense	c.313	p.A105S	1.000	NULL	NULL	-	no_errors	PRR15	HGNC	ENSG00000176532	tier1	-	-	27	0	0.00	3	10	76.92
PRR23A	0	genome.wustl.edu	37	3	138724356	138724356	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	138724356	138724356	G	T	SNP	PRR23A	ENST00000383163	human	ensembl	74_37	-1	known	missense	c.755	p.P252Q	0.000	pfam_UPF0572	pfam_UPF0572	-	no_errors	PRR23A	HGNC	ENSG00000206260	tier1	-	-	41	0	0.00	25	61	70.93
PRRT1	0	genome.wustl.edu	37	6	32119803	32119803	+	RNA	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	32119803	32119803	G	A	SNP	PRRT1	ENST00000486917	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.578	-	-	-	no_errors	PRRT1	HGNC	ENSG00000204314	tier1	-	-	24	0	0.00	7	15	68.18
PRRT3	0	genome.wustl.edu	37	3	9991025	9991025	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	9991025	9991025	C	T	SNP	PRRT3	ENST00000295984	human	ensembl	74_37	-1	known	missense	c.775	p.E259K	0.729	NULL	NULL	-	no_errors	PRRT3	HGNC	ENSG00000163704	tier1	-	-	25	0	0.00	3	14	82.35
PRSS35	0	genome.wustl.edu	37	6	84233745	84233745	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	84233745	84233745	T	A	SNP	PRSS35	ENST00000369700	human	ensembl	74_37	+1	known	missense	c.585	p.S195R	0.001	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom	-	no_errors	PRSS35	HGNC	ENSG00000146250	tier1	-	-	39	0	0.00	21	17	44.74
PSPH	0	genome.wustl.edu	37	7	56087300	56087300	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	56087300	56087300	C	T	SNP	PSPH	ENST00000275605	human	ensembl	74_37	-1	known	missense	c.268	p.G90S	0.998	pfam_HAD-like_dom,pfam_Pyrimidine_nucleotidase_eu,pfam_Pase_PHOSPHO-typ,superfamily_HAD-like_dom,tigrfam_SerB,tigrfam_HAD-SF_hydro_IB_PSP-like	pfam_HAD-like_dom,pfam_Pyrimidine_nucleotidase_eu,pfam_Pase_PHOSPHO-typ,superfamily_HAD-like_dom,tigrfam_SerB,tigrfam_HAD-SF_hydro_IB_PSP-like	-	no_errors	PSPH	HGNC	ENSG00000146733				45	0	0.00	205	32	13.50
PTCHD2	0	genome.wustl.edu	37	1	11580782	11580782	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	11580782	11580782	G	T	SNP	PTCHD2	ENST00000294484	human	ensembl	74_37	+1	known	missense	c.2239	p.A747S	1.000	pfam_Patched	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	-	no_errors	PTCHD2	HGNC	ENSG00000204624	tier1	-	-	22	0	0.00	9	10	52.63
PTGDR2	0	genome.wustl.edu	37	11	60620689	60620689	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	60620689	60620689	G	A	SNP	PTGDR2	ENST00000332539	human	ensembl	74_37	-1	known	silent	c.507	p.F169	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Anphylx_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Formyl_pep_rcpt,prints_Anphylx_rcpt	-	no_errors	PTGDR2	HGNC	ENSG00000183134	tier1	-	-	39	0	0.00	4	16	80.00
PYCRL	0	genome.wustl.edu	37	8	144688255	144688255	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	8	144688255	144688255	G	A	SNP	PYCRL	ENST00000220966	human	ensembl	74_37	-1	known	missense	c.655	p.R219C	1.000	superfamily_6-PGluconate_DH_C-like,pirsf_Pyrroline-COOH_reductase,tigrfam_Pyrroline-COOH_reductase	superfamily_6-PGluconate_DH_C-like,pirsf_Pyrroline-COOH_reductase,tigrfam_Pyrroline-COOH_reductase	-	no_errors	PYCRL	HGNC	ENSG00000104524	tier1	-	-	92	0	0.00	43	30	41.10
RABGGTB	0	genome.wustl.edu	37	1	76253024	76253024	+	RNA	SNP	A	A	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	76253024	76253024	A	G	SNP	RABGGTB	ENST00000471759	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RABGGTB	HGNC	ENSG00000137955	tier1	-	-	15	0	0.00	13	9	40.91
RADIL	0	genome.wustl.edu	37	7	4874577	4874577	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	4874577	4874577	C	A	SNP	RADIL	ENST00000445392	human	ensembl	74_37	-1	known	missense	c.1072	p.A358S	0.001	NULL	pfam_Ras-assoc,smart_Ras-assoc,pfscan_Ras-assoc	-	no_errors	RADIL	HGNC	ENSG00000157927	tier1	-	-	23	0	0.00	14	10	41.67
RAET1K	0	genome.wustl.edu	37	6	150321319	150321319	+	RNA	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	150321319	150321319	G	C	SNP	RAET1K	ENST00000533735	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RAET1K	HGNC	ENSG00000218358	tier1	-	-	90	0	0.00	82	10	10.87
RALYL	0	genome.wustl.edu	37	8	85774568	85774568	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	8	85774568	85774568	C	T	SNP	RALYL	ENST00000521268	human	ensembl	74_37	+1	known	missense	c.451	p.R151C	0.997	pirsf_hnRNP_C_Raly	pfam_RRM_dom,smart_RRM_dom,pirsf_hnRNP_C_Raly,pfscan_RRM_dom	-	no_errors	RALYL	HGNC	ENSG00000184672	tier1	-	-	51	0	0.00	25	19	43.18
RASGRP3	0	genome.wustl.edu	37	2	33764169	33764169	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	33764169	33764169	C	A	SNP	RASGRP3	ENST00000402538	human	ensembl	74_37	+1	known	silent	c.1170	p.T390	1.000	superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_DAG/PE-bd	-	no_errors	RASGRP3	HGNC	ENSG00000152689	tier1	-	-	24	0	0.00	21	21	50.00
RBMXL3	0	genome.wustl.edu	37	X	114424215	114424215	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	X	114424215	114424215	G	T	SNP	RBMXL3	ENST00000424776	human	ensembl	74_37	+1	known	missense	c.211	p.G71C	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMXL3	HGNC	ENSG00000175718	tier1	-	-	11	0	0.00	0	13	100.00
REXO1L1	0	genome.wustl.edu	37	8	86575214	86575214	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	8	86575214	86575214	C	A	SNP	REXO1L1	ENST00000379010	human	ensembl	74_37	-1	putative	silent	c.513	p.T171	0.000	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	REXO1L1	HGNC	ENSG00000205176	tier1	-	-	97	0	0.00	57	20	25.97
RFTN1	0	genome.wustl.edu	37	3	16419499	16419499	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	16419499	16419499	G	T	SNP	RFTN1	ENST00000334133	human	ensembl	74_37	-1	known	silent	c.552	p.T184	0.000	NULL	NULL	-	no_errors	RFTN1	HGNC	ENSG00000131378	tier1	-	-	20	0	0.00	1	11	91.67
RFX8	0	genome.wustl.edu	37	2	102029526	102029526	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	102029526	102029526	C	G	SNP	RFX8	ENST00000376826	human	ensembl	74_37	-1	known	missense	c.908	p.R303P	0.658	NULL	pfam_DNA-bd_RFX	-	no_errors	RFX8	HGNC	ENSG00000196460	tier1	-	-	30	0	0.00	17	49	74.24
RHBDF1	0	genome.wustl.edu	37	16	109825	109825	+	Splice_Site	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	109825	109825	C	A	SNP	RHBDF1	ENST00000262316	human	ensembl	74_37	-1	known	splice_site	c.1723-1	e13-1	1.000	-	-	-	no_errors	RHBDF1	HGNC	ENSG00000007384	tier1	-	-	31	0	0.00	23	18	43.90
RHBDF1	0	genome.wustl.edu	37	16	112579	112579	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	112579	112579	C	G	SNP	RHBDF1	ENST00000262316	human	ensembl	74_37	-1	known	missense	c.910	p.G304R	0.811	pfam_Rhomboid_SP	pfam_Rhomboid_SP,pfam_Peptidase_S54_rhomboid_dom	-	no_errors	RHBDF1	HGNC	ENSG00000007384	tier1	-	-	50	0	0.00	25	31	55.36
RHOJ	0	genome.wustl.edu	37	14	63757700	63757700	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	14	63757700	63757700	G	T	SNP	RHOJ	ENST00000316754	human	ensembl	74_37	+1	known	missense	c.603	p.K201N	0.997	superfamily_P-loop_NTPase	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOJ	HGNC	ENSG00000126785				29	0	0.00	33	2	5.56
RIBC2	0	genome.wustl.edu	37	22	45821879	45821879	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	22	45821879	45821879	G	C	SNP	RIBC2	ENST00000538017	human	ensembl	74_37	+1	known	missense	c.712	p.D238H	0.952	pfam_RIB43A	pfam_RIB43A	-	no_errors	RIBC2	HGNC	ENSG00000128408	tier1	-	-	29	0	0.00	10	7	41.18
RNF17	0	genome.wustl.edu	37	13	25367319	25367319	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	13	25367319	25367319	C	A	SNP	RNF17	ENST00000255324	human	ensembl	74_37	+1	known	missense	c.1075	p.P359T	0.000	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor,pfscan_Znf_RING	-	no_errors	RNF17	HGNC	ENSG00000132972	tier1	-	-	37	0	0.00	29	19	39.58
RNF213	0	genome.wustl.edu	37	17	78261934	78261934	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	78261934	78261934	G	T	SNP	RNF213	ENST00000582970	human	ensembl	74_37	+1	known	silent	c.582	p.P194	0.000	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF213	HGNC	ENSG00000173821				8	0	0.00	42	5	10.64
RNF5	0	genome.wustl.edu	37	6	32147865	32147865	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	32147865	32147865	C	T	SNP	RNF5	ENST00000427134	human	ensembl	74_37	+1	known	missense	c.407	p.T136I	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF5	HGNC	ENSG00000204308				22	0	0.00	27	2	6.90
RRN3P1	0	genome.wustl.edu	37	16	21817466	21817466	+	RNA	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	21817466	21817466	G	A	SNP	RRN3P1	ENST00000546471	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RRN3P1	HGNC	ENSG00000248124	tier1	-	-	49	0	0.00	77	9	10.47
SCARB2	0	genome.wustl.edu	37	4	77095377	77095377	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	77095377	77095377	G	A	SNP	SCARB2	ENST00000264896	human	ensembl	74_37	-1	known	missense	c.914	p.T305M	0.001	pfam_CD36,prints_LimpII	pfam_CD36,superfamily_NA-bd_OB-fold,prints_LimpII,prints_CD36,prints_CD36_antigen	-	no_errors	SCARB2	HGNC	ENSG00000138760				20	0	0.00	37	2	5.13
SEL1L2	0	genome.wustl.edu	37	20	13830032	13830032	+	RNA	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	20	13830032	13830032	C	A	SNP	SEL1L2	ENST00000482196	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SEL1L2	HGNC	ENSG00000101251	tier1	-	-	44	0	0.00	6	28	82.35
SERPINA4	0	genome.wustl.edu	37	14	95030234	95030234	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	14	95030234	95030234	G	A	SNP	SERPINA4	ENST00000298841	human	ensembl	74_37	+1	known	missense	c.415	p.V139M	0.016	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA4	HGNC	ENSG00000100665	tier1	-	-	35	0	0.00	33	23	41.07
SETBP1	0	genome.wustl.edu	37	18	42456562	42456562	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	18	42456562	42456562	G	A	SNP	SETBP1	ENST00000426838	human	ensembl	74_37	+1	known	silent	c.573	p.K191	0.000	NULL	NULL	-	no_errors	SETBP1	HGNC	ENSG00000152217	tier1	-	-	93	0	0.00	7	50	87.72
SEZ6L2	0	genome.wustl.edu	37	16	29909173	29909173	+	Splice_Site	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	29909173	29909173	C	G	SNP	SEZ6L2	ENST00000308713	human	ensembl	74_37	-1	known	splice_site	c.211+1	e2+1	1.000	-	-	-	no_errors	SEZ6L2	HGNC	ENSG00000174938	tier1	-	-	21	0	0.00	12	11	47.83
SHANK2	0	genome.wustl.edu	37	11	70332808	70332808	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	70332808	70332808	C	G	SNP	SHANK2	ENST00000338508	human	ensembl	74_37	-1	known	missense	c.3593	p.G1198A	0.739	NULL	pfam_SAM_type1,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK2	HGNC	ENSG00000162105	tier1	-	-	46	0	0.00	145	17	10.49
SHROOM4	0	genome.wustl.edu	37	X	50350728	50350729	+	In_Frame_Ins	INS	-	-	TCC			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	X	50350728	50350729	-	TCC	INS	SHROOM4	ENST00000289292	human	ensembl	74_37	-1	known	in_frame_ins	c.3414_3413	p.1142in_frame_insE	0.000:0.000	NULL	pfam_ASD2,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM4	HGNC	ENSG00000158352	tier1			9	0	0.00	5	4	44.44
SLC17A4	0	genome.wustl.edu	37	6	25773853	25773853	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	25773853	25773853	C	G	SNP	SLC17A4	ENST00000377905	human	ensembl	74_37	+1	known	missense	c.938	p.A313G	0.001	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A4	HGNC	ENSG00000146039	tier1	-	-	67	0	0.00	100	30	23.08
SLC22A1	0	genome.wustl.edu	37	6	160575942	160575942	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	160575942	160575942	G	C	SNP	SLC22A1	ENST00000366963	human	ensembl	74_37	+1	known	missense	c.1498	p.A500P	1.000	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A1	HGNC	ENSG00000175003	tier1	-	-	84	0	0.00	40	38	48.72
SLC6A19	0	genome.wustl.edu	37	5	1221849	1221849	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	1221849	1221849	C	A	SNP	SLC6A19	ENST00000304460	human	ensembl	74_37	+1	known	missense	c.1735	p.P579T	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A19	HGNC	ENSG00000174358	tier1	-	-	38	0	0.00	29	32	52.46
SLC6A9	0	genome.wustl.edu	37	1	44476525	44476525	+	Silent	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	44476525	44476525	C	T	SNP	SLC6A9	ENST00000360584	human	ensembl	74_37	-1	known	silent	c.279	p.K93	1.000	prints_Na/ntran_symport_glycine_GLY1	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_glycine_GLY1	-	no_errors	SLC6A9	HGNC	ENSG00000196517	tier1	-	-	62	0	0.00	62	6	8.82
SLCO1C1	0	genome.wustl.edu	37	12	20876174	20876174	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	20876174	20876174	C	A	SNP	SLCO1C1	ENST00000381552	human	ensembl	74_37	+1	known	missense	c.1172	p.A391D	1.000	pfam_OA_transporter,pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,tigrfam_OA_transporter	-	no_errors	SLCO1C1	HGNC	ENSG00000139155	tier1	-	-	64	0	0.00	36	26	41.94
SMARCAL1	0	genome.wustl.edu	37	2	217280027	217280027	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	217280027	217280027	G	A	SNP	SMARCAL1	ENST00000357276	human	ensembl	74_37	+1	known	silent	c.600	p.S200	0.000	NULL	pfam_HARP_dom,pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCAL1	HGNC	ENSG00000138375	tier1	-	-	24	0	0.00	30	21	41.18
SMG8	0	genome.wustl.edu	37	17	57289759	57289759	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	57289759	57289759	G	T	SNP	SMG8	ENST00000300917	human	ensembl	74_37	+1	known	missense	c.1817	p.R606L	1.000	pfam_Smg8/Smg9	pfam_Smg8/Smg9	-	no_errors	SMG8	HGNC	ENSG00000167447	tier1	-	-	38	0	0.00	28	27	48.21
SMYD1	0	genome.wustl.edu	37	2	88383991	88383991	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	88383991	88383991	G	T	SNP	SMYD1	ENST00000419482	human	ensembl	74_37	+1	known	missense	c.294	p.K98N	1.000	pfam_SET_dom,smart_SET_dom	pfam_SET_dom,pfam_Znf_MYND,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_MYND	-	no_errors	SMYD1	HGNC	ENSG00000115593	tier1	-	-	37	0	0.00	20	23	53.49
SMYD5	0	genome.wustl.edu	37	2	73441790	73441790	+	RNA	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	73441790	73441790	C	T	SNP	SMYD5	ENST00000474652	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SMYD5	HGNC	ENSG00000135632	tier1	-	-	40	0	0.00	20	34	62.96
SNHG14	0	genome.wustl.edu	37	15	25432588	25432588	+	RNA	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	15	25432588	25432588	G	A	SNP	SNHG14	ENST00000424208	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078	tier1	-	-	42	0	0.00	36	24	40.00
SNHG14	0	genome.wustl.edu	37	15	25463800	25463800	+	RNA	SNP	A	A	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	15	25463800	25463800	A	C	SNP	SNHG14	ENST00000365067	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.406	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078	tier1	-	-	86	0	0.00	44	36	45.00
SNX17	0	genome.wustl.edu	37	2	27599346	27599346	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	27599346	27599346	G	C	SNP	SNX17	ENST00000233575	human	ensembl	74_37	+1	known	missense	c.1258	p.E420Q	1.000	NULL	pfam_Phox,superfamily_Phox,superfamily_FERM_central,smart_Phox,pfscan_Phox,pfscan_Ras-assoc	-	no_errors	SNX17	HGNC	ENSG00000115234	tier1	-	-	49	0	0.00	31	44	57.89
SNX20	0	genome.wustl.edu	37	16	50707505	50707505	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	50707505	50707505	G	C	SNP	SNX20	ENST00000330943	human	ensembl	74_37	-1	known	missense	c.763	p.Q255E	0.495	NULL	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX20	HGNC	ENSG00000167208	tier1	-	-	29	0	0.00	18	15	45.45
SOCS5	0	genome.wustl.edu	37	2	46986133	46986133	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	46986133	46986133	G	C	SNP	SOCS5	ENST00000306503	human	ensembl	74_37	+1	known	missense	c.464	p.R155P	0.999	pfam_SOCS	pfam_SOCS,pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS5	HGNC	ENSG00000171150	tier1	-	-	39	0	0.00	35	20	36.36
SOX30	0	genome.wustl.edu	37	5	157075856	157075856	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	157075856	157075856	C	T	SNP	SOX30	ENST00000265007	human	ensembl	74_37	-1	known	missense	c.1016	p.R339Q	1.000	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX30	HGNC	ENSG00000039600	tier1	-	-	67	0	0.00	29	33	53.23
SP140L	0	genome.wustl.edu	37	2	231249995	231249995	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	231249995	231249995	C	G	SNP	SP140L	ENST00000415673	human	ensembl	74_37	+1	known	missense	c.760	p.L254V	0.001	NULL	pfam_Sp100,pfam_SAND_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom,pfscan_Bromodomain	-	no_errors	SP140L	HGNC	ENSG00000185404	tier1	-	-	25	0	0.00	28	28	50.00
SPAG17	0	genome.wustl.edu	37	1	118584486	118584486	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	118584486	118584486	G	T	SNP	SPAG17	ENST00000336338	human	ensembl	74_37	-1	known	silent	c.2994	p.V998	0.000	NULL	NULL	-	no_errors	SPAG17	HGNC	ENSG00000155761	tier1	-	-	88	0	0.00	58	46	44.23
SPECC1L	0	genome.wustl.edu	37	22	24718230	24718230	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	22	24718230	24718230	A	G	SNP	SPECC1L	ENST00000314328	human	ensembl	74_37	+1	known	missense	c.1282	p.T428A	1.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_bHLH_dom,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1L	HGNC	ENSG00000100014	tier1	-	-	26	0	0.00	14	20	58.82
SPI1	0	genome.wustl.edu	37	11	47380277	47380278	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	47380277	47380278	CA	-	DEL	SPI1	ENST00000533968	human	ensembl	74_37	-1	putative	frame_shift_del	c.611_610	p.C204fs	0.001:0.001	NULL	NULL	-	no_errors	SPI1	HGNC	ENSG00000066336	tier1			25	0	0.00	20	2	9.09
SPTBN4	0	genome.wustl.edu	37	19	41025381	41025381	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	41025381	41025381	G	T	SNP	SPTBN4	ENST00000352632	human	ensembl	74_37	+1	known	missense	c.2977	p.V993L	0.999	pirsf_Spectrin_bsu,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN4	HGNC	ENSG00000160460	tier1	-	-	62	0	0.00	23	28	54.90
STON1-GTF2A1L	0	genome.wustl.edu	37	2	49003595	49003595	+	RNA	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	49003595	49003595	G	T	SNP	STON1-GTF2A1L	ENST00000463040	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	STON1-GTF2A1L	HGNC	ENSG00000068781	tier1	-	-	10	0	0.00	11	15	57.69
SUV420H2	0	genome.wustl.edu	37	19	55858816	55858816	+	Nonstop_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	55858816	55858816	G	T	SNP	SUV420H2	ENST00000255613	human	ensembl	74_37	+1	known	nonstop	c.1388	p.*463L	0.019	NULL	pfam_SET_dom,smart_SET_dom,pfscan_SET_dom	-	no_errors	SUV420H2	HGNC	ENSG00000133247	tier1	-	-	17	0	0.00	4	8	66.67
SYCN	0	genome.wustl.edu	37	19	39694850	39694850	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	39694850	39694850	G	A	SNP	SYCN	ENST00000318438	human	ensembl	74_37	-1	known	silent	c.45	p.S15	0.003	NULL	NULL	-	no_errors	SYCN	HGNC	ENSG00000179751	tier1	-	-	15	0	0.00	12	8	40.00
SYNE2	0	genome.wustl.edu	37	14	64421498	64421498	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	14	64421498	64421498	G	A	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.652	p.A218T	1.000	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1	-	-	18	0	0.00	7	12	63.16
SYT3	0	genome.wustl.edu	37	19	51133168	51133168	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	51133168	51133168	C	G	SNP	SYT3	ENST00000338916	human	ensembl	74_37	-1	known	missense	c.935	p.G312A	1.000	superfamily_C2_dom,prints_Synaptotagmin	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_dom	-	no_errors	SYT3	HGNC	ENSG00000213023	tier1	-	-	69	0	0.00	36	27	42.86
TANGO6	0	genome.wustl.edu	37	16	69007950	69007950	+	Silent	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	69007950	69007950	C	T	SNP	TANGO6	ENST00000261778	human	ensembl	74_37	+1	known	silent	c.2721	p.D907	0.566	superfamily_ARM-type_fold	pfam_DUF2435,pfam_DUF2411,superfamily_ARM-type_fold	-	no_errors	TANGO6	HGNC	ENSG00000103047	tier1	-	-	38	0	0.00	42	28	40.00
TASP1	0	genome.wustl.edu	37	20	13539707	13539707	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	20	13539707	13539707	C	A	SNP	TASP1	ENST00000337743	human	ensembl	74_37	-1	known	missense	c.623	p.R208M	1.000	pfam_Peptidase_T2	pfam_Peptidase_T2	-	no_errors	TASP1	HGNC	ENSG00000089123	tier1	-	-	38	0	0.00	4	25	86.21
TASP1	0	genome.wustl.edu	37	20	13539717	13539717	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	20	13539717	13539717	G	C	SNP	TASP1	ENST00000337743	human	ensembl	74_37	-1	known	missense	c.613	p.L205V	1.000	pfam_Peptidase_T2	pfam_Peptidase_T2	-	no_errors	TASP1	HGNC	ENSG00000089123	tier1	-	-	39	0	0.00	5	24	82.76
TBC1D16	0	genome.wustl.edu	37	17	77916004	77916004	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	77916004	77916004	G	T	SNP	TBC1D16	ENST00000310924	human	ensembl	74_37	-1	known	missense	c.1910	p.T637K	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D16	HGNC	ENSG00000167291	tier1	-	-	12	0	0.00	13	39	75.00
TBC1D26	0	genome.wustl.edu	37	17	15641610	15641610	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	15641610	15641610	A	G	SNP	TBC1D26	ENST00000437605	human	ensembl	74_37	+1	known	missense	c.296	p.Y99C	0.413	superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D26	HGNC	ENSG00000214946				65	0	0.00	63	4	5.97
TBX22	0	genome.wustl.edu	37	X	79282340	79282340	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	X	79282340	79282340	C	A	SNP	TBX22	ENST00000373294	human	ensembl	74_37	+1	known	silent	c.771	p.T257	1.000	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX22	HGNC	ENSG00000122145	tier1	-	-	26	0	0.00	1	17	94.44
TENM4	0	genome.wustl.edu	37	11	78383285	78383285	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	78383285	78383285	C	A	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	silent	c.5586	p.R1862	0.996	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256	tier1	-	-	38	0	0.00	94	31	24.60
TENM4	0	genome.wustl.edu	37	11	78383286	78383286	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	78383286	78383286	C	A	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	missense	c.5585	p.R1862L	0.999	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256	tier1	-	-	38	0	0.00	99	31	23.85
TFAM	0	genome.wustl.edu	37	10	60148569	60148570	+	Frame_Shift_Ins	INS	-	-	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	10	60148569	60148570	-	A	INS	TFAM	ENST00000487519	human	ensembl	74_37	+1	known	frame_shift_ins	c.431_432	p.E148fs	0.006:0.006	superfamily_HMG_box_dom	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TFAM	HGNC	ENSG00000108064	tier1			31	0	0.00	23	3	11.54
TFF3	0	genome.wustl.edu	37	21	43735501	43735501	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	21	43735501	43735501	G	C	SNP	TFF3	ENST00000291525	human	ensembl	74_37	-1	known	missense	c.134	p.P45R	0.000	NULL	pfam_P_trefoil,superfamily_P_trefoil,smart_P_trefoil,prints_P_trefoil_chordata	-	no_errors	TFF3	HGNC	ENSG00000160180	tier1	-	-	88	0	0.00	34	41	54.67
TMEM39A	0	genome.wustl.edu	37	3	119156763	119156763	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	119156763	119156763	C	T	SNP	TMEM39A	ENST00000319172	human	ensembl	74_37	-1	known	missense	c.763	p.A255T	0.988	pfam_Uncharacterised_TMEM39	pfam_Uncharacterised_TMEM39	-	no_errors	TMEM39A	HGNC	ENSG00000176142	tier1	-	-	46	0	0.00	1	27	96.43
TMPRSS5	0	genome.wustl.edu	37	11	113569745	113569745	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	113569745	113569745	C	A	SNP	TMPRSS5	ENST00000299882	human	ensembl	74_37	-1	known	silent	c.210	p.L70	0.998	NULL	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS5	HGNC	ENSG00000166682	tier1	-	-	38	0	0.00	13	29	69.05
TMPRSS6	0	genome.wustl.edu	37	22	37485698	37485698	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	22	37485698	37485698	C	A	SNP	TMPRSS6	ENST00000381792	human	ensembl	74_37	-1	known	silent	c.756	p.L252	0.869	pirsf_Pept_S1A_matriptase-2,superfamily_CUB_dom	pirsf_Pept_S1A_matriptase-2,pfam_Peptidase_S1,pfam_LDrepeatLR_classA_rpt,pfam_SEA_dom,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1	-	no_errors	TMPRSS6	HGNC	ENSG00000187045	tier1	-	-	97	0	0.00	37	36	49.32
TP53	0	genome.wustl.edu	37	17	7577114	7577114	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	7577114	7577114	C	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.824	p.C275F	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	313	0	0.00	190	172	47.38
TP53	0	genome.wustl.edu	37	17	7577547	7577547	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	7577547	7577547	C	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.734	p.G245V	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	208	0	0.00	132	118	47.20
TRAPPC12	0	genome.wustl.edu	37	2	3425669	3425669	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	3425669	3425669	G	T	SNP	TRAPPC12	ENST00000324266	human	ensembl	74_37	+1	known	missense	c.1182	p.R394S	1.000	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TRAPPC12	HGNC	ENSG00000171853	tier1	-	-	24	0	0.00	21	13	38.24
TRIM67	0	genome.wustl.edu	37	1	231349582	231349582	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	231349582	231349582	G	T	SNP	TRIM67	ENST00000366652	human	ensembl	74_37	+1	known	missense	c.2145	p.K715N	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box	-	no_errors	TRIM67	HGNC	ENSG00000119283	tier1	-	-	44	0	0.00	7	3	30.00
TRIML2	0	genome.wustl.edu	37	4	189026335	189026335	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	189026335	189026335	C	A	SNP	TRIML2	ENST00000512729	human	ensembl	74_37	-1	known	missense	c.38	p.R13M	0.978	NULL	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	-	no_errors	TRIML2	HGNC	ENSG00000179046	tier1	-	-	49	0	0.00	36	29	44.62
TSPEAR	0	genome.wustl.edu	37	21	45950950	45950950	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	21	45950950	45950950	C	A	SNP	TSPEAR	ENST00000323084	human	ensembl	74_37	-1	known	silent	c.609	p.R203	0.995	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_EPTP,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_EAR	-	no_errors	TSPEAR	HGNC	ENSG00000175894	tier1	-	-	44	0	0.00	38	19	33.33
TTN	0	genome.wustl.edu	37	2	179540441	179540441	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	179540441	179540441	G	T	SNP	TTN	ENST00000589042	human	ensembl	74_37	-1	putative	silent	c.34494	p.V11498	0.847	superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_PPAK_motif,pfam_Titin_Z,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,superfamily_ARM-type_fold,superfamily_P-loop_NTPase,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	19	0	0.00	2	6	75.00
TTN	0	genome.wustl.edu	37	2	179579779	179579779	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	179579779	179579779	C	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	nonsense	c.22402	p.E7468*	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	27	0	0.00	2	22	91.67
TTN	0	genome.wustl.edu	37	2	179631333	179631333	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	179631333	179631333	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.9478	p.E3160K	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	19	0	0.00	4	12	75.00
TTN-AS1	0	genome.wustl.edu	37	2	179470053	179470053	+	RNA	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	179470053	179470053	C	A	SNP	TTN-AS1	ENST00000419746	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TTN-AS1	HGNC	ENSG00000237298	tier1	-	-	35	0	0.00	3	22	88.00
TUBB8	0	genome.wustl.edu	37	10	93704	93704	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	10	93704	93704	T	C	SNP	TUBB8	ENST00000309812	human	ensembl	74_37	-1	known	missense	c.628	p.I210V	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Tubulin,prints_Delta_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin,prints_Delta_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB8	HGNC	ENSG00000173876	tier1	-	-	102	0	0.00	54	53	49.53
TULP1	0	genome.wustl.edu	37	6	35471401	35471401	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	35471401	35471401	G	C	SNP	TULP1	ENST00000229771	human	ensembl	74_37	-1	known	missense	c.1258	p.R420G	1.000	pfam_Tubby_C,superfamily_Tubby_C-like,prints_Tubby_C	pfam_Tubby_C,superfamily_Tubby_C-like,prints_Tubby_C	-	no_errors	TULP1	HGNC	ENSG00000112041	tier1	-	-	29	0	0.00	16	17	51.52
TULP4	0	genome.wustl.edu	37	6	158922786	158922786	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	6	158922786	158922786	G	A	SNP	TULP4	ENST00000367097	human	ensembl	74_37	+1	known	silent	c.2091	p.S697	1.000	NULL	pfam_Tubby_C,pfam_SOCS_C,pfam_WD40_repeat,superfamily_Tubby_C-like,superfamily_WD40_repeat_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_WD40_repeat,smart_SOCS_C,pfscan_SOCS_C,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TULP4	HGNC	ENSG00000130338	tier1	-	-	47	0	0.00	21	22	51.16
UGGT1	0	genome.wustl.edu	37	2	128877948	128877948	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	128877948	128877948	G	T	SNP	UGGT1	ENST00000259253	human	ensembl	74_37	+1	known	silent	c.891	p.L297	0.943	NULL	pfam_UDP-g_GGtrans	-	no_errors	UGGT1	HGNC	ENSG00000136731	tier1	-	-	49	0	0.00	3	18	85.71
UGGT1	0	genome.wustl.edu	37	2	128914889	128914889	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	2	128914889	128914889	G	T	SNP	UGGT1	ENST00000259253	human	ensembl	74_37	+1	known	missense	c.2324	p.R775L	1.000	NULL	pfam_UDP-g_GGtrans	-	no_errors	UGGT1	HGNC	ENSG00000136731	tier1	-	-	107	0	0.00	12	52	81.25
UGT2B15	0	genome.wustl.edu	37	4	69535727	69535727	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	69535727	69535727	C	T	SNP	UGT2B15	ENST00000338206	human	ensembl	74_37	-1	known	missense	c.610	p.D204N	0.998	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2B15	HGNC	ENSG00000196620	tier1	-	-	72	0	0.00	61	31	33.70
UGT8	0	genome.wustl.edu	37	4	115585172	115585172	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	115585172	115585172	G	T	SNP	UGT8	ENST00000310836	human	ensembl	74_37	+1	known	missense	c.844	p.G282C	1.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT8	HGNC	ENSG00000174607	tier1	-	-	32	0	0.00	27	18	40.00
UNC13B	0	genome.wustl.edu	37	9	35398978	35398978	+	Silent	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	9	35398978	35398978	G	T	SNP	UNC13B	ENST00000378496	human	ensembl	74_37	+1	known	silent	c.3774	p.A1258	1.000	NULL	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13B	HGNC	ENSG00000198722	tier1	-	-	48	0	0.00	4	17	80.95
UQCRC2	0	genome.wustl.edu	37	16	21964769	21964769	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	21964769	21964769	T	A	SNP	UQCRC2	ENST00000268379	human	ensembl	74_37	+1	known	missense	c.25	p.S9T	0.622	NULL	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	UQCRC2	HGNC	ENSG00000140740	tier1	-	-	29	0	0.00	12	22	64.71
USP2	0	genome.wustl.edu	37	11	119243625	119243625	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	11	119243625	119243625	G	A	SNP	USP2	ENST00000260187	human	ensembl	74_37	-1	known	missense	c.566	p.A189V	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP2	HGNC	ENSG00000036672				26	0	0.00	44	4	8.33
VN1R4	0	genome.wustl.edu	37	19	53770337	53770337	+	Silent	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	53770337	53770337	G	C	SNP	VN1R4	ENST00000311170	human	ensembl	74_37	-1	known	silent	c.582	p.L194	0.962	pfam_Vmron_rcpt_1,pfam_TAS2_rcpt,pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_Vmron_rcpt_1,pfam_TAS2_rcpt,pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Vmron_rcpt_1	-	no_errors	VN1R4	HGNC	ENSG00000228567				55	0	0.00	87	5	5.43
WASH6P	0	genome.wustl.edu	37	X	155252325	155252325	+	RNA	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	X	155252325	155252325	C	T	SNP	WASH6P	ENST00000340131	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.078	-	-	-	no_errors	WASH6P	HGNC	ENSG00000182484	tier1	-	-	58	0	0.00	32	12	27.27
WDR66	0	genome.wustl.edu	37	12	122437781	122437781	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	12	122437781	122437781	G	C	SNP	WDR66	ENST00000288912	human	ensembl	74_37	+1	known	missense	c.3166	p.G1056R	0.897	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR66	HGNC	ENSG00000158023	tier1	-	-	24	0	0.00	15	17	53.12
WWC1	0	genome.wustl.edu	37	5	167881043	167881043	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	5	167881043	167881043	G	A	SNP	WWC1	ENST00000265293	human	ensembl	74_37	+1	known	missense	c.2596	p.G866R	0.441	NULL	pfam_WW_dom,superfamily_C2_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WWC1	HGNC	ENSG00000113645				32	0	0.00	27	2	6.90
XKR4	0	genome.wustl.edu	37	8	56436366	56436366	+	Silent	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	8	56436366	56436366	C	G	SNP	XKR4	ENST00000327381	human	ensembl	74_37	+1	known	silent	c.1533	p.A511	1.000	pfam_Transport_prot_XK	pfam_Transport_prot_XK	-	no_errors	XKR4	HGNC	ENSG00000206579	tier1	-	-	26	0	0.00	18	17	48.57
ZNF137P	0	genome.wustl.edu	37	19	53091854	53091854	+	RNA	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	53091854	53091854	G	T	SNP	ZNF137P	ENST00000597158	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.158	-	-	-	no_errors	ZNF137P	HGNC	ENSG00000123870	tier1	-	-	16	0	0.00	16	5	23.81
ZNF200	0	genome.wustl.edu	37	16	3283513	3283513	+	Silent	SNP	C	C	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	3283513	3283513	C	T	SNP	ZNF200	ENST00000414144	human	ensembl	74_37	-1	known	silent	c.243	p.Q81	0.962	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF200	HGNC	ENSG00000010539				46	0	0.00	47	3	6.00
ZNF415	0	genome.wustl.edu	37	19	53619674	53619674	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	53619674	53619674	C	A	SNP	ZNF415	ENST00000243643	human	ensembl	74_37	-1	known	missense	c.28	p.D10Y	0.132	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,smart_Znf_BED_prd,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF415	HGNC	ENSG00000170954	tier1	-	-	31	0	0.00	27	32	54.24
ZNF425	0	genome.wustl.edu	37	7	148800755	148800755	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	7	148800755	148800755	C	A	SNP	ZNF425	ENST00000378061	human	ensembl	74_37	-1	known	silent	c.2208	p.A736	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	ZNF425	HGNC	ENSG00000204947	tier1	-	-	31	0	0.00	5	17	77.27
ZNF445	0	genome.wustl.edu	37	3	44491967	44491967	+	Silent	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	3	44491967	44491967	C	A	SNP	ZNF445	ENST00000396077	human	ensembl	74_37	-1	known	silent	c.792	p.L264	1.000	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF445	HGNC	ENSG00000185219	tier1	-	-	62	0	0.00	10	36	78.26
ZNF500	0	genome.wustl.edu	37	16	4803036	4803036	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	16	4803036	4803036	C	A	SNP	ZNF500	ENST00000219478	human	ensembl	74_37	-1	known	missense	c.784	p.G262C	0.000	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF500	HGNC	ENSG00000103199	tier1	-	-	37	0	0.00	19	26	57.78
ZNF528	0	genome.wustl.edu	37	19	52919741	52919741	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	52919741	52919741	G	A	SNP	ZNF528	ENST00000360465	human	ensembl	74_37	+1	known	missense	c.1636	p.E546K	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF528	HGNC	ENSG00000167555	tier1	-	-	35	0	0.00	22	29	56.86
ZNF534	0	genome.wustl.edu	37	19	52954467	52954467	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	52954467	52954467	G	T	SNP	ZNF534	ENST00000301085	human	ensembl	74_37	+1	putative	missense	c.299	p.R100L	0.028	NULL	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF534	HGNC	ENSG00000198633	tier1	-	-	24	0	0.00	18	33	64.71
ZNF551	0	genome.wustl.edu	37	19	58198238	58198238	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	58198238	58198238	A	G	SNP	ZNF551	ENST00000282296	human	ensembl	74_37	+1	known	missense	c.595	p.T199A	0.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF551	HGNC	ENSG00000204519	tier1	-	-	18	0	0.00	8	16	66.67
ZNF595	0	genome.wustl.edu	37	4	53332	53332	+	RNA	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	4	53332	53332	G	A	SNP	ZNF595	ENST00000339368	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF595	HGNC	ENSG00000197701	tier1	-	-	345	0	0.00	180	34	15.89
ZNF599	0	genome.wustl.edu	37	19	35258224	35258224	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	35258224	35258224	C	G	SNP	ZNF599	ENST00000329285	human	ensembl	74_37	-1	known	missense	c.238	p.A80P	0.000	pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF599	HGNC	ENSG00000153896	tier1	-	-	39	0	0.00	15	22	59.46
ZNF729	0	genome.wustl.edu	37	19	22499579	22499579	+	Silent	SNP	G	G	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	22499579	22499579	G	A	SNP	ZNF729	ENST00000601693	human	ensembl	74_37	+1	novel	silent	c.3360	p.T1120	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF729	HGNC	ENSG00000196350	tier1	-	-	34	0	0.00	18	21	53.85
ZNF750	0	genome.wustl.edu	37	17	80789738	80789738	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	17	80789738	80789738	G	T	SNP	ZNF750	ENST00000269394	human	ensembl	74_37	-1	known	nonsense	c.593	p.S198*	0.998	NULL	NULL	-	no_errors	ZNF750	HGNC	ENSG00000141579	tier1	-	-	24	0	0.00	4	13	76.47
ZNF780A	0	genome.wustl.edu	37	19	40581754	40581754	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	19	40581754	40581754	C	A	SNP	ZNF780A	ENST00000455521	human	ensembl	74_37	-1	known	missense	c.598	p.G200W	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF780A	HGNC	ENSG00000197782	tier1	-	-	57	0	0.00	42	32	43.24
ZRANB2	0	genome.wustl.edu	37	1	71535064	71535065	+	RNA	INS	-	-	T			TCGA-LN-A49Y-01A-11D-A27G-09	TCGA-LN-A49Y-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	554d5940-81b2-4d30-8f95-ca4680d23b18	78f201b5-47a9-4fcc-bff1-a93fa936ed65	1	71535064	71535065	-	T	INS	ZRANB2	ENST00000487510	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.991:1.000	-	-	-	no_errors	ZRANB2	HGNC	ENSG00000132485	tier1			43	0	0.00	43	4	8.51
