Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA17P	0	genome.wustl.edu	37	16	2415790	2415790	+	RNA	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	16	2415790	2415790	A	G	SNP	ABCA17P	ENST00000469908	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ABCA17P	HGNC	ENSG00000238098	tier1	-	-	40	0	0.00	33	24	41.38
ABCA9	0	genome.wustl.edu	37	17	67016582	67016582	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	17	67016582	67016582	T	C	SNP	ABCA9	ENST00000340001	human	ensembl	74_37	-1	known	missense	c.2547	p.I849M	0.730	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA9	HGNC	ENSG00000154258	tier1	-	-	29	0	0.00	7	9	56.25
ADAM9	0	genome.wustl.edu	37	8	38871570	38871570	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	8	38871570	38871570	A	G	SNP	ADAM9	ENST00000481513	human	ensembl	74_37	+1	putative	missense	c.341	p.Y114C	0.120	NULL	pfam_Peptidase_M12B_N	-	no_errors	ADAM9	HGNC	ENSG00000168615	tier1	-	-	36	0	0.00	10	10	50.00
ADCYAP1R1	0	genome.wustl.edu	37	7	31121353	31121353	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	7	31121353	31121353	C	G	SNP	ADCYAP1R1	ENST00000304166	human	ensembl	74_37	+1	known	missense	c.312	p.N104K	0.040	pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,prints_GPCR_2_PACAP_1_rcpt	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_PACAP_1_rcpt,prints_GPCR_2_secretin-like	-	no_errors	ADCYAP1R1	HGNC	ENSG00000078549	tier1	-	-	62	0	0.00	72	30	29.41
AIM1	0	genome.wustl.edu	37	6	106967551	106967551	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	106967551	106967551	G	A	SNP	AIM1	ENST00000369066	human	ensembl	74_37	+1	known	missense	c.1244	p.S415N	0.003	NULL	pfam_Beta/gamma_crystallin,pfam_Ricin_B_lectin,superfamily_G_crystallin-rel,superfamily_Ricin_B_lectin,smart_Beta/gamma_crystallin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	AIM1	HGNC	ENSG00000112297	tier1	-	-	31	0	0.00	18	4	18.18
ANKRD32	0	genome.wustl.edu	37	5	93990336	93990336	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	5	93990336	93990336	A	G	SNP	ANKRD32	ENST00000265140	human	ensembl	74_37	+1	known	missense	c.1034	p.K345R	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_BRCT_dom,smart_BRCT_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD32	HGNC	ENSG00000133302				60	0	0.00	45	5	10.00
AOC3	0	genome.wustl.edu	37	17	41004906	41004906	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	17	41004906	41004906	C	G	SNP	AOC3	ENST00000308423	human	ensembl	74_37	+1	known	missense	c.1546	p.L516V	1.000	pfam_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_C	pfam_Cu_amine_oxidase_C,pfam_Cu_amine_oxidase_N2,pfam_Cu_amine_oxidase_N3,superfamily_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	-	no_errors	AOC3	HGNC	ENSG00000131471	tier1	-	-	42	0	0.00	6	12	66.67
ARID2	0	genome.wustl.edu	37	12	46299425	46299425	+	RNA	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	46299425	46299425	A	G	SNP	ARID2	ENST00000479608	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ARID2	HGNC	ENSG00000189079	tier1	-	-	56	0	0.00	28	12	30.00
ARMC3	0	genome.wustl.edu	37	10	23257303	23257303	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	10	23257303	23257303	G	T	SNP	ARMC3	ENST00000298032	human	ensembl	74_37	+1	known	missense	c.801	p.M267I	0.009	superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,pfam_HEAT,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	ARMC3	HGNC	ENSG00000165309	tier1	-	-	22	0	0.00	11	3	21.43
ASB15	0	genome.wustl.edu	37	7	123264623	123264623	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	7	123264623	123264623	C	A	SNP	ASB15	ENST00000275699	human	ensembl	74_37	+1	known	missense	c.452	p.A151D	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C,prints_Ankyrin_rpt	-	no_errors	ASB15	HGNC	ENSG00000146809	tier1	-	-	36	0	0.00	3	18	85.71
ASTN1	0	genome.wustl.edu	37	1	176926897	176926897	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	176926897	176926897	G	T	SNP	ASTN1	ENST00000367654	human	ensembl	74_37	-1	known	missense	c.1828	p.R610S	1.000	NULL	superfamily_Fibronectin_type3,smart_EG-like_dom,smart_MACPF,pfscan_Fibronectin_type3	-	no_errors	ASTN1	HGNC	ENSG00000152092				38	0	0.00	34	3	8.11
ATP1A1	0	genome.wustl.edu	37	1	116939316	116939316	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	116939316	116939316	G	T	SNP	ATP1A1	ENST00000295598	human	ensembl	74_37	+1	known	missense	c.1933	p.A645S	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A1	HGNC	ENSG00000163399	tier1	-	-	55	0	0.00	50	4	7.41
ATP1A1	0	genome.wustl.edu	37	1	116931580	116931580	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	116931580	116931580	C	T	SNP	ATP1A1	ENST00000295598	human	ensembl	74_37	+1	known	silent	c.693	p.F231	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A1	HGNC	ENSG00000163399				19	0	0.00	12	2	14.29
ATP8A1	0	genome.wustl.edu	37	4	42425657	42425657	+	Silent	SNP	C	C	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	4	42425657	42425657	C	G	SNP	ATP8A1	ENST00000381668	human	ensembl	74_37	-1	known	silent	c.3189	p.L1063	1.000	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8A1	HGNC	ENSG00000124406	tier1	-	-	29	0	0.00	5	16	76.19
AXIN1	0	genome.wustl.edu	37	16	396856	396856	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	16	396856	396856	G	C	SNP	AXIN1	ENST00000262320	human	ensembl	74_37	-1	known	missense	c.170	p.S57W	0.991	NULL	pfam_DIX,pfam_RGS_dom,pfam_Axin_b-cat-bd,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,smart_DIX,pfscan_DIX,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	AXIN1	HGNC	ENSG00000103126	tier1	-	-	28	0	0.00	21	11	34.38
BCHE	0	genome.wustl.edu	37	3	165548781	165548781	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	3	165548781	165548781	A	T	SNP	BCHE	ENST00000264381	human	ensembl	74_37	-1	known	missense	c.41	p.F14Y	0.007	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AChE_tetra,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	BCHE	HGNC	ENSG00000114200	tier1	-	-	38	0	0.00	36	8	17.78
BMP8B	0	genome.wustl.edu	37	1	40230649	40230649	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	40230649	40230649	C	T	SNP	BMP8B	ENST00000397360	human	ensembl	74_37	-1	known	silent	c.705	p.K235	0.000	NULL	pfam_TGF-b_N	-	no_errors	BMP8B	HGNC	ENSG00000116985	tier1	rs201039967	-	27	0	0.00	23	4	14.81
BMPR2	0	genome.wustl.edu	37	2	203420310	203420310	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	203420310	203420310	A	G	SNP	BMPR2	ENST00000374580	human	ensembl	74_37	+1	known	missense	c.1922	p.H641R	0.994	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BMPR2	HGNC	ENSG00000204217	tier1	-	-	22	0	0.00	7	3	30.00
BRDT	0	genome.wustl.edu	37	1	92470076	92470076	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	92470076	92470076	G	A	SNP	BRDT	ENST00000362005	human	ensembl	74_37	+1	known	missense	c.2494	p.A832T	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRDT	HGNC	ENSG00000137948	tier1	-	-	45	0	0.00	32	4	11.11
C17orf58	0	genome.wustl.edu	37	17	65989212	65989213	+	Frame_Shift_Ins	INS	-	-	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	17	65989212	65989213	-	A	INS	C17orf58	ENST00000449250	human	ensembl	74_37	-1	known	frame_shift_ins	c.51_50	p.M17fs	0.000:0.176	superfamily_TIMP-like_OB-fold	superfamily_TIMP-like_OB-fold	-	no_errors	C17orf58	HGNC	ENSG00000186665	tier1			47	0	0.00	20	43	68.25
C9orf64	0	genome.wustl.edu	37	9	86570359	86570359	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	9	86570359	86570359	C	T	SNP	C9orf64	ENST00000376344	human	ensembl	74_37	-1	known	silent	c.534	p.A178	0.223	pfam_DUF2419	pfam_DUF2419	-	no_errors	C9orf64	HGNC	ENSG00000165118				41	0	0.00	15	2	11.76
CA10	0	genome.wustl.edu	37	17	49825063	49825063	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	17	49825063	49825063	C	T	SNP	CA10	ENST00000340813	human	ensembl	74_37	-1	known	missense	c.413	p.R138Q	1.000	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA10	HGNC	ENSG00000154975	tier1	-	-	97	0	0.00	51	8	13.56
CACNA1I	0	genome.wustl.edu	37	22	40045758	40045760	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	22	40045758	40045760	AGG	0	DEL	CACNA1I	ENST00000336649	human	ensembl	74_37	+1	known	in_frame_del	c.1838_1840	p.E617in_frame_del	1.000:1.000:1.000	NULL	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1I	HGNC	ENSG00000100346				91	0	0.00	102	7	6.42
CASP6	0	genome.wustl.edu	37	4	110624546	110624546	+	Silent	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	4	110624546	110624546	G	A	SNP	CASP6	ENST00000265164	human	ensembl	74_37	-1	known	silent	c.6	p.S2	0.189	NULL	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP6	HGNC	ENSG00000138794	tier1	-	-	34	0	0.00	18	18	50.00
CAST	0	genome.wustl.edu	37	5	96098065	96098065	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	5	96098065	96098065	C	T	SNP	CAST	ENST00000395813	human	ensembl	74_37	+1	known	missense	c.1921	p.R641C	0.581	pfam_Prot_inh_calpain	pfam_Prot_inh_calpain	-	no_errors	CAST	HGNC	ENSG00000153113	tier1	-	-	38	0	0.00	31	11	26.19
CASZ1	0	genome.wustl.edu	37	1	10715742	10715742	+	Silent	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	10715742	10715742	G	A	SNP	CASZ1	ENST00000377022	human	ensembl	74_37	-1	known	silent	c.1629	p.H543	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	CASZ1	HGNC	ENSG00000130940	tier1	-	-	58	0	0.00	28	15	34.88
CCDC88C	0	genome.wustl.edu	37	14	91804354	91804354	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	14	91804354	91804354	T	C	SNP	CCDC88C	ENST00000389857	human	ensembl	74_37	-1	known	missense	c.1045	p.M349V	1.000	pfam_Hook-related_fam	pfam_Hook-related_fam,superfamily_Prefoldin,superfamily_Fum_Rdtase/Succ_DH_flav-like_C	-	no_errors	CCDC88C	HGNC	ENSG00000015133	tier1	-	-	38	0	0.00	26	12	31.58
CD22	0	genome.wustl.edu	37	19	35827012	35827012	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	19	35827012	35827012	G	T	SNP	CD22	ENST00000085219	human	ensembl	74_37	+1	known	missense	c.486	p.L162F	0.116	pfam_CD80_C2-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Immunoglobulin,pfam_Ig_I-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CD22	HGNC	ENSG00000012124				42	0	0.00	20	2	9.09
CD83	0	genome.wustl.edu	37	6	14131847	14131847	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	14131847	14131847	G	A	SNP	CD83	ENST00000379153	human	ensembl	74_37	+1	known	missense	c.250	p.A84T	0.003	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	CD83	HGNC	ENSG00000112149				62	0	0.00	51	3	5.56
CDH4	0	genome.wustl.edu	37	20	60498649	60498649	+	Silent	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	20	60498649	60498649	C	A	SNP	CDH4	ENST00000360469	human	ensembl	74_37	+1	known	silent	c.1515	p.P505	0.997	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH4	HGNC	ENSG00000179242	tier1	-	-	37	0	0.00	30	5	14.29
CELF1	0	genome.wustl.edu	37	11	47496971	47496971	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	11	47496971	47496971	T	C	SNP	CELF1	ENST00000532048	human	ensembl	74_37	-1	known	missense	c.1184	p.Y395C	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CELF1	HGNC	ENSG00000149187	tier1	-	-	38	0	0.00	20	15	42.86
CEP170	0	genome.wustl.edu	37	1	243288181	243288182	+	RNA	INS	-	-	TT			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	243288181	243288182	-	TT	INS	CEP170	ENST00000468254	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	CEP170	HGNC	ENSG00000143702	tier1			31	0	0.00	22	3	12.00
CHEK2P2	0	genome.wustl.edu	37	15	20490509	20490509	+	RNA	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	15	20490509	20490509	G	A	SNP	CHEK2P2	ENST00000555186	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CHEK2P2	HGNC	ENSG00000259156	tier1	-	-	424	0	0.00	246	50	16.89
CHTOP	0	genome.wustl.edu	37	1	153610909	153610909	+	Silent	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	153610909	153610909	A	G	SNP	CHTOP	ENST00000368694	human	ensembl	74_37	+1	known	silent	c.204	p.A68	0.995	NULL	NULL	-	no_errors	CHTOP	HGNC	ENSG00000160679				34	0	0.00	27	5	15.62
CLEC4G	0	genome.wustl.edu	37	19	7794380	7794380	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	19	7794380	7794380	G	T	SNP	CLEC4G	ENST00000328853	human	ensembl	74_37	-1	known	missense	c.754	p.Q252K	0.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	CLEC4G	HGNC	ENSG00000182566	tier1	-	-	28	0	0.00	32	6	15.79
CLIC1	0	genome.wustl.edu	37	6	31704068	31704068	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	31704068	31704068	C	G	SNP	CLIC1	ENST00000375779	human	ensembl	74_37	-1	known	missense	c.10	p.E4Q	1.000	NULL	superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_Int_Cl_channel,tigrfam_Int_Cl_channel	-	no_errors	CLIC1	HGNC	ENSG00000213719				33	0	0.00	46	3	6.00
CLIC3	0	genome.wustl.edu	37	9	139890207	139890207	+	Silent	SNP	C	C	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	9	139890207	139890207	C	G	SNP	CLIC3	ENST00000494426	human	ensembl	74_37	-1	known	silent	c.36	p.A12	0.914	superfamily_Thioredoxin-like_fold	superfamily_Glutathione-S-Trfase_C-like,superfamily_Thioredoxin-like_fold,prints_Int_Cl_channel	-	no_errors	CLIC3	HGNC	ENSG00000169583	tier1	-	-	28	0	0.00	9	24	72.73
CMYA5	0	genome.wustl.edu	37	5	79095254	79095254	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	5	79095254	79095254	G	C	SNP	CMYA5	ENST00000446378	human	ensembl	74_37	+1	known	missense	c.12025	p.V4009L	1.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309	tier1	-	-	79	0	0.00	47	27	36.49
CNKSR1	0	genome.wustl.edu	37	1	26508862	26508862	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	26508862	26508862	C	T	SNP	CNKSR1	ENST00000374253	human	ensembl	74_37	+1	known	missense	c.488	p.A163V	0.187	NULL	pfam_CRIC_domain_Chordata,pfam_Pleckstrin_homology,pfam_SAM_type1,superfamily_SAM/pointed,superfamily_PDZ,smart_SAM,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_SAM	-	no_errors	CNKSR1	HGNC	ENSG00000142675				65	0	0.00	64	4	5.88
CNN2	0	genome.wustl.edu	37	19	1037969	1037970	+	RNA	DEL	TT	TT	-			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	19	1037969	1037970	TT	-	DEL	CNN2	ENST00000606983	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CNN2	HGNC	ENSG00000064666	tier1			22	0	0.00	10	4	28.57
CNTNAP5	0	genome.wustl.edu	37	2	125284959	125284959	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	125284959	125284959	C	A	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	missense	c.1572	p.D524E	1.000	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052	tier1	-	-	86	0	0.00	32	30	48.39
CR1L	0	genome.wustl.edu	37	1	207872577	207872577	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	207872577	207872577	G	T	SNP	CR1L	ENST00000508064	human	ensembl	74_37	+1	known	nonsense	c.1186	p.G396*	0.001	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR1L	HGNC	ENSG00000197721	tier1	-	-	225	0	0.00	93	72	43.64
CRYBB1	0	genome.wustl.edu	37	22	27008042	27008042	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	22	27008042	27008042	G	A	SNP	CRYBB1	ENST00000215939	human	ensembl	74_37	-1	known	missense	c.293	p.A98V	0.749	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	pfam_Beta/gamma_crystallin,superfamily_G_crystallin-rel,smart_Beta/gamma_crystallin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	CRYBB1	HGNC	ENSG00000100122	tier1	rs144372140	-	72	0	0.00	52	11	17.46
CSF2RA	0	genome.wustl.edu	37	X	1409389	1409389	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	X	1409389	1409389	C	G	SNP	CSF2RA	ENST00000417535	human	ensembl	74_37	+1	known	missense	c.633	p.D211E	0.000	pfam_IL-6_rcpt_alpha-bd	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	-	no_errors	CSF2RA	HGNC	ENSG00000198223	tier1	-	-	102	0	0.00	71	14	16.47
CTAGE6	0	genome.wustl.edu	37	7	143453646	143453646	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	7	143453646	143453646	T	C	SNP	CTAGE6	ENST00000470691	human	ensembl	74_37	-1	known	missense	c.1106	p.E369G	0.022	NULL	superfamily_tRNA-bd_arm	-	no_errors	CTAGE6	HGNC	ENSG00000271321	tier1	-	-	378	0	0.00	206	14	6.36
CYBRD1	0	genome.wustl.edu	37	2	172378944	172378944	+	RNA	SNP	A	A	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	172378944	172378944	A	C	SNP	CYBRD1	ENST00000468308	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.190	-	-	-	no_errors	CYBRD1	HGNC	ENSG00000071967	tier1	-	-	28	0	0.00	8	10	55.56
CYP11B2	0	genome.wustl.edu	37	8	143998573	143998573	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	8	143998573	143998573	C	T	SNP	CYP11B2	ENST00000323110	human	ensembl	74_37	-1	known	silent	c.297	p.K99	0.105	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_mitochondrial,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_B	-	no_errors	CYP11B2	HGNC	ENSG00000179142	tier1	-	-	26	0	0.00	47	5	9.62
DDX4	0	genome.wustl.edu	37	5	55110956	55110956	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	5	55110956	55110956	C	T	SNP	DDX4	ENST00000505374	human	ensembl	74_37	+1	known	missense	c.1943	p.S648L	0.288	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX4	HGNC	ENSG00000152670	tier1	-	-	91	0	0.00	71	33	31.73
DDX54	0	genome.wustl.edu	37	12	113601889	113601891	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	113601889	113601891	CCT	-	DEL	DDX54	ENST00000314045	human	ensembl	74_37	-1	known	in_frame_del	c.1921_1919	p.E640in_frame_del	0.000:0.000:0.000	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DBP10CT,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX54	HGNC	ENSG00000123064	tier1			47	0	0.00	26	3	10.34
DHX9	0	genome.wustl.edu	37	1	182829305	182829305	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	182829305	182829305	A	T	SNP	DHX9	ENST00000367549	human	ensembl	74_37	+1	known	missense	c.1318	p.I440F	1.000	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_dsRNA-bd_dom,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_dsRNA-bd_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_dsRNA-bd_dom	-	no_errors	DHX9	HGNC	ENSG00000135829	tier1	-	-	35	0	0.00	20	3	13.04
DNAH10	0	genome.wustl.edu	37	12	124332585	124332585	+	Silent	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	124332585	124332585	G	A	SNP	DNAH10	ENST00000409039	human	ensembl	74_37	+1	known	silent	c.5538	p.A1846	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_PyrdxlP-dep_Trfase,smart_AAA+_ATPase	-	no_errors	DNAH10	HGNC	ENSG00000197653				59	0	0.00	37	2	5.13
DNAH12	0	genome.wustl.edu	37	3	57391464	57391464	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	3	57391464	57391464	G	T	SNP	DNAH12	ENST00000351747	human	ensembl	74_37	-1	known	missense	c.6435	p.F2145L	0.972	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH12	HGNC	ENSG00000174844	tier1	-	-	49	0	0.00	23	3	11.54
DNAH5	0	genome.wustl.edu	37	5	13700767	13700767	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	5	13700767	13700767	T	A	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.13705	p.I4569F	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	23	0	0.00	19	8	29.63
EDAR	0	genome.wustl.edu	37	2	109527234	109527234	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	109527234	109527234	G	-	DEL	EDAR	ENST00000376651	human	ensembl	74_37	-1	known	frame_shift_del	c.824	p.P275fs	0.995	NULL	pfam_Death_domain,superfamily_DEATH-like_dom	-	no_errors	EDAR	HGNC	ENSG00000135960	tier1			55	0	0.00	23	2	8.00
EDC4	0	genome.wustl.edu	37	16	67911274	67911274	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	16	67911274	67911274	C	T	SNP	EDC4	ENST00000358933	human	ensembl	74_37	+1	known	silent	c.606	p.F202	0.992	superfamily_WD40_repeat_dom,smart_WD40_repeat	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EDC4	HGNC	ENSG00000038358	tier1	-	-	104	0	0.00	30	43	58.90
EHBP1	0	genome.wustl.edu	37	2	62998478	62998478	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	62998478	62998478	C	A	SNP	EHBP1	ENST00000263991	human	ensembl	74_37	+1	known	missense	c.263	p.P88H	1.000	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	EHBP1	HGNC	ENSG00000115504	tier1	-	-	123	0	0.00	88	45	33.83
EHD1	0	genome.wustl.edu	37	11	64627509	64627509	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	11	64627509	64627509	G	A	SNP	EHD1	ENST00000320631	human	ensembl	74_37	-1	known	missense	c.802	p.R268C	1.000	superfamily_P-loop_NTPase	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase,smart_EPS15_homology,pfscan_EF_hand_dom,pfscan_EPS15_homology	-	no_errors	EHD1	HGNC	ENSG00000110047	tier1	rs145274478	-	67	0	0.00	42	22	34.38
EHD1	0	genome.wustl.edu	37	11	64627713	64627713	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	11	64627713	64627713	A	G	SNP	EHD1	ENST00000320631	human	ensembl	74_37	-1	known	missense	c.598	p.F200L	1.000	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase,smart_EPS15_homology,pfscan_EF_hand_dom,pfscan_EPS15_homology	-	no_errors	EHD1	HGNC	ENSG00000110047	tier1	-	-	35	0	0.00	24	26	52.00
ENSG00000205746	0	genome.wustl.edu	37	16	18437612	18437612	+	RNA	DEL	G	G	-			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	16	18437612	18437612	G	-	DEL	ENSG00000205746	ENST00000433020	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.416	-	-	-	no_errors	RP11-1212A22.1	Clone_based_vega_gene	ENSG00000205746	tier1			30	0	0.00	21	8	27.59
ENSG00000221810	0	genome.wustl.edu	37	5	92053194	92053194	+	RNA	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	5	92053194	92053194	T	C	SNP	ENSG00000221810	ENST00000408883	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	AC026781.1	Clone_based_ensembl_gene	ENSG00000221810	tier1	-	-	13	0	0.00	2	7	77.78
ENSG00000230393	0	genome.wustl.edu	37	2	100722620	100722620	+	RNA	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	100722620	100722620	C	A	SNP	ENSG00000230393	ENST00000434301	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.078	-	-	-	no_errors	AC092667.2	Clone_based_vega_gene	ENSG00000230393	tier1	-	-	16	0	0.00	13	5	27.78
EPHA5	0	genome.wustl.edu	37	4	66197758	66197758	+	Silent	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	4	66197758	66197758	G	T	SNP	EPHA5	ENST00000273854	human	ensembl	74_37	-1	known	silent	c.2941	p.R981	1.000	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_SAM	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242				52	0	0.00	35	2	5.41
ERMARD	0	genome.wustl.edu	37	6	170154006	170154006	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	170154006	170154006	A	G	SNP	ERMARD	ENST00000366773	human	ensembl	74_37	+1	known	missense	c.53	p.Y18C	0.924	NULL	NULL	-	no_errors	ERMARD	HGNC	ENSG00000130023	tier1	-	-	55	0	0.00	19	20	51.28
ERVW-1	0	genome.wustl.edu	37	7	92099372	92099372	+	Silent	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	7	92099372	92099372	G	A	SNP	ERVW-1	ENST00000493463	human	ensembl	74_37	-1	known	silent	c.324	p.Y108	0.489	pfam_TLV/ENV_coat_polyprotein	pfam_TLV/ENV_coat_polyprotein	-	no_errors	ERVW-1	HGNC	ENSG00000242950	tier1	-	-	32	0	0.00	32	16	33.33
ETNK1	0	genome.wustl.edu	37	12	22826493	22826493	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	22826493	22826493	C	T	SNP	ETNK1	ENST00000266517	human	ensembl	74_37	+1	known	missense	c.1111	p.R371C	1.000	pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom	pfam_Aminoglycoside_PTrfase,pfam_DUF227,superfamily_Kinase-like_dom	-	no_errors	ETNK1	HGNC	ENSG00000139163				28	0	0.00	32	3	8.57
EXD1	0	genome.wustl.edu	37	15	41508931	41508931	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	15	41508931	41508931	G	T	SNP	EXD1	ENST00000314992	human	ensembl	74_37	-1	known	missense	c.149	p.P50H	0.938	superfamily_RNaseH-like_dom	pfam_3'-5'_exonuclease_dom,superfamily_RNaseH-like_dom,smart_3'-5'_exonuclease_dom	-	no_errors	EXD1	HGNC	ENSG00000178997	tier1	-	-	109	0	0.00	73	4	5.19
EXO5	0	genome.wustl.edu	37	1	40981183	40981183	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	40981183	40981183	A	G	SNP	EXO5	ENST00000296380	human	ensembl	74_37	+1	known	missense	c.967	p.M323V	0.171	pfam_EXOV	pfam_EXOV	-	no_errors	EXO5	HGNC	ENSG00000164002	tier1	rs145178039	-	20	0	0.00	14	10	41.67
FAM133B	0	genome.wustl.edu	37	7	92206427	92206427	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	7	92206427	92206427	G	A	SNP	FAM133B	ENST00000445716	human	ensembl	74_37	-1	known	missense	c.455	p.S152L	1.000	NULL	NULL	-	no_errors	FAM133B	HGNC	ENSG00000234545	tier1	-	-	24	0	0.00	26	27	50.94
FAM183B	0	genome.wustl.edu	37	7	38725392	38725392	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	7	38725392	38725392	G	T	SNP	FAM183B	ENST00000409072	human	ensembl	74_37	-1	novel	missense	c.214	p.H72N	0.938	NULL	NULL	-	no_errors	FAM183B	HGNC	ENSG00000164556	tier1	-	-	78	0	0.00	52	29	35.80
FAM208B	0	genome.wustl.edu	37	10	5791064	5791064	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	10	5791064	5791064	C	G	SNP	FAM208B	ENST00000328090	human	ensembl	74_37	+1	known	missense	c.5680	p.P1894A	0.000	NULL	pfam_DUF3715,pfam_DUF3699	-	no_errors	FAM208B	HGNC	ENSG00000108021	tier1	-	-	42	0	0.00	29	22	43.14
FAM76A	0	genome.wustl.edu	37	1	28087091	28087091	+	Nonstop_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	28087091	28087091	G	T	SNP	FAM76A	ENST00000010299	human	ensembl	74_37	+1	known	nonstop	c.1025	p.*342L	0.962	NULL	NULL	-	no_errors	FAM76A	HGNC	ENSG00000009780	tier1	-	-	26	0	0.00	31	4	11.43
FAM83B	0	genome.wustl.edu	37	6	54735248	54735248	+	Silent	SNP	C	C	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	54735248	54735248	C	G	SNP	FAM83B	ENST00000306858	human	ensembl	74_37	+1	known	silent	c.204	p.V68	0.915	pfam_DUF1669	pfam_DUF1669	-	no_errors	FAM83B	HGNC	ENSG00000168143	tier1	-	-	47	0	0.00	12	13	52.00
FITM1	0	genome.wustl.edu	37	14	24601457	24601457	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	14	24601457	24601457	T	C	SNP	FITM1	ENST00000267426	human	ensembl	74_37	+1	known	missense	c.304	p.F102L	1.000	pfam_FIT	pfam_FIT	-	no_errors	FITM1	HGNC	ENSG00000139914	tier1	-	-	30	0	0.00	23	7	23.33
FLRT3	0	genome.wustl.edu	37	20	14306311	14306311	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	20	14306311	14306311	T	C	SNP	FLRT3	ENST00000341420	human	ensembl	74_37	-1	known	missense	c.1842	p.I614M	1.000	NULL	pfam_Leu-rich_rpt,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_Fibronectin_type3	-	no_errors	FLRT3	HGNC	ENSG00000125848	tier1	-	-	99	0	0.00	58	17	22.67
GAL3ST4	0	genome.wustl.edu	37	7	99758410	99758410	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	7	99758410	99758410	C	T	SNP	GAL3ST4	ENST00000360039	human	ensembl	74_37	-1	known	missense	c.602	p.R201H	0.991	pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	pfam_Gal-3-0_sulfotransfrase,superfamily_P-loop_NTPase	-	no_errors	GAL3ST4	HGNC	ENSG00000197093				33	0	0.00	36	3	7.69
GARS	0	genome.wustl.edu	37	7	30661051	30661051	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	7	30661051	30661051	G	T	SNP	GARS	ENST00000389266	human	ensembl	74_37	+1	known	missense	c.1402	p.D468Y	1.000	pfscan_aa-tRNA-synth_II,tigrfam_tRNA-synt_gly	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_WHEP-TRS,superfamily_Anticodon-bd,superfamily_S15_NS1_RNA-bd,prints_tRNA-synt_gly,pfscan_aa-tRNA-synth_II,pfscan_WHEP-TRS,tigrfam_tRNA-synt_gly	-	no_errors	GARS	HGNC	ENSG00000106105	tier1	-	-	41	0	0.00	31	14	31.11
GGN	0	genome.wustl.edu	37	19	38876922	38876922	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	19	38876922	38876922	G	A	SNP	GGN	ENST00000334928	human	ensembl	74_37	-1	known	missense	c.980	p.S327L	0.042	NULL	NULL	-	no_errors	GGN	HGNC	ENSG00000179168				36	0	0.00	17	2	10.53
GGT5	0	genome.wustl.edu	37	22	24627486	24627486	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	22	24627486	24627486	G	T	SNP	GGT5	ENST00000398292	human	ensembl	74_37	-1	known	missense	c.767	p.T256K	0.966	pfam_GGT_peptidase,prints_GGT_peptidase	pfam_GGT_peptidase,prints_GGT_peptidase	-	no_errors	GGT5	HGNC	ENSG00000099998	tier1	-	-	38	0	0.00	37	14	27.45
GLTSCR1L	0	genome.wustl.edu	37	6	42824919	42824919	+	Silent	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	42824919	42824919	G	T	SNP	GLTSCR1L	ENST00000314073	human	ensembl	74_37	+1	known	silent	c.2199	p.L733	1.000	NULL	NULL	-	no_errors	GLTSCR1L	HGNC	ENSG00000112624	tier1	-	-	28	0	0.00	26	17	39.53
GLTSCR1L	0	genome.wustl.edu	37	6	42824920	42824920	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	42824920	42824920	C	T	SNP	GLTSCR1L	ENST00000314073	human	ensembl	74_37	+1	known	missense	c.2200	p.L734F	1.000	NULL	NULL	-	no_errors	GLTSCR1L	HGNC	ENSG00000112624	tier1	-	-	28	0	0.00	25	17	40.48
GNAI2	0	genome.wustl.edu	37	3	50296329	50296329	+	RNA	DEL	G	G	-			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	3	50296329	50296329	G	-	DEL	GNAI2	ENST00000491100	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GNAI2	HGNC	ENSG00000114353	tier1			9	0	0.00	3	3	50.00
GOLGA6B	0	genome.wustl.edu	37	15	72958352	72958352	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	15	72958352	72958352	C	T	SNP	GOLGA6B	ENST00000421285	human	ensembl	74_37	+1	known	missense	c.1837	p.L613F	1.000	NULL	NULL	-	no_errors	GOLGA6B	HGNC	ENSG00000215186				100	0	0.00	71	14	16.47
GPR107	0	genome.wustl.edu	37	9	132816283	132816283	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	9	132816283	132816283	C	T	SNP	GPR107	ENST00000372410	human	ensembl	74_37	+1	known	silent	c.72	p.L24	0.162	NULL	pfam_TM_rcpt_euk,pfam_Intimal_thickness-rel_rcpt	-	no_errors	GPR107	HGNC	ENSG00000148358	tier1	-	-	15	0	0.00	11	4	26.67
GPR179	0	genome.wustl.edu	37	17	36483731	36483731	+	Silent	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	17	36483731	36483731	G	T	SNP	GPR179	ENST00000342292	human	ensembl	74_37	-1	known	silent	c.5721	p.S1907	0.016	NULL	pfam_GPCR_3_C,superfamily_Growth_fac_rcpt_N_dom,pfscan_GPCR_3_C	-	no_errors	GPR179	HGNC	ENSG00000188888	tier1	-	-	93	0	0.00	47	4	7.84
GPR98	0	genome.wustl.edu	37	5	89948338	89948338	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	5	89948338	89948338	G	A	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.3592	p.E1198K	1.000	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199				34	0	0.00	14	8	36.36
GRASP	0	genome.wustl.edu	37	12	52407950	52407950	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	52407950	52407950	G	T	SNP	GRASP	ENST00000293662	human	ensembl	74_37	+1	known	missense	c.647	p.R216M	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	GRASP	HGNC	ENSG00000161835	tier1	-	-	60	0	0.00	46	5	9.80
HCAR3	0	genome.wustl.edu	37	12	123200613	123200613	+	Silent	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	123200613	123200613	G	A	SNP	HCAR3	ENST00000528880	human	ensembl	74_37	-1	known	silent	c.672	p.A224	0.446	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	HCAR3	HGNC	ENSG00000255398				14	0	0.00	3	4	57.14
HEATR1	0	genome.wustl.edu	37	1	236730087	236730087	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	236730087	236730087	G	C	SNP	HEATR1	ENST00000366582	human	ensembl	74_37	-1	known	missense	c.4167	p.H1389Q	0.918	superfamily_ARM-type_fold	pfam_BP28_C_dom,pfam_U3snoRNP10,superfamily_ARM-type_fold	-	no_errors	HEATR1	HGNC	ENSG00000119285	tier1	-	-	22	0	0.00	7	8	53.33
HELZ2	0	genome.wustl.edu	37	20	62196935	62196935	+	Silent	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	20	62196935	62196935	G	A	SNP	HELZ2	ENST00000467148	human	ensembl	74_37	-1	known	silent	c.3240	p.D1080	0.799	NULL	superfamily_P-loop_NTPase	-	no_errors	HELZ2	HGNC	ENSG00000130589	tier1	-	-	15	0	0.00	12	4	25.00
HIST1H1B	0	genome.wustl.edu	37	6	27834657	27834657	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	27834657	27834657	C	A	SNP	HIST1H1B	ENST00000331442	human	ensembl	74_37	-1	known	missense	c.651	p.K217N	0.995	NULL	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1B	HGNC	ENSG00000184357				54	0	0.00	52	3	5.45
HMGN2P46	0	genome.wustl.edu	37	15	45848231	45848231	+	RNA	DEL	T	T	-			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	15	45848231	45848231	T	-	DEL	HMGN2P46	ENST00000313559	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	HMGN2P46	HGNC	ENSG00000179362	tier1			17	0	0.00	8	4	33.33
HNF4A	0	genome.wustl.edu	37	20	43052981	43052981	+	Silent	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	20	43052981	43052981	T	C	SNP	HNF4A	ENST00000443598	human	ensembl	74_37	+1	known	silent	c.1216	p.L406	0.000	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_Retinoid-X_rcpt/HNF4,prints_COUP_TF	-	no_errors	HNF4A	HGNC	ENSG00000101076	tier1	-	-	18	0	0.00	8	4	33.33
HR	0	genome.wustl.edu	37	8	21977925	21977925	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	8	21977925	21977925	G	C	SNP	HR	ENST00000381418	human	ensembl	74_37	-1	known	missense	c.2706	p.S902R	0.061	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	HR	HGNC	ENSG00000168453	tier1	-	-	32	0	0.00	10	9	47.37
HSF4	0	genome.wustl.edu	37	16	67203680	67203680	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	16	67203680	67203680	T	C	SNP	HSF4	ENST00000264009	human	ensembl	74_37	+1	known	missense	c.1471	p.S491P	0.968	NULL	pfam_HSF_DNA-bd,smart_HSF_DNA-bd,prints_HSF_DNA-bd	-	no_errors	HSF4	HGNC	ENSG00000102878	tier1	-	-	55	0	0.00	44	4	8.33
HTR1D	0	genome.wustl.edu	37	1	23519984	23519984	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	23519984	23519984	G	C	SNP	HTR1D	ENST00000314113	human	ensembl	74_37	-1	known	missense	c.729	p.H243Q	0.219	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_5HT1D_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_5HT1D_rcpt,prints_5HT_rcpt	-	no_errors	HTR1D	HGNC	ENSG00000179546	tier1	-	-	57	0	0.00	47	11	18.97
INPP5A	0	genome.wustl.edu	37	10	134579331	134579331	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	10	134579331	134579331	G	T	SNP	INPP5A	ENST00000368594	human	ensembl	74_37	+1	known	missense	c.958	p.D320Y	1.000	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,smart_IPPc	-	no_errors	INPP5A	HGNC	ENSG00000068383	tier1	-	-	74	0	0.00	73	4	5.19
INTS4	0	genome.wustl.edu	37	11	77690104	77690104	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	11	77690104	77690104	T	C	SNP	INTS4	ENST00000534064	human	ensembl	74_37	-1	known	missense	c.409	p.I137V	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	INTS4	HGNC	ENSG00000149262	tier1	-	-	61	0	0.00	23	19	45.24
ITGA8	0	genome.wustl.edu	37	10	15573108	15573108	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	10	15573108	15573108	C	A	SNP	ITGA8	ENST00000378076	human	ensembl	74_37	-1	known	nonsense	c.2923	p.E975*	1.000	NULL	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA8	HGNC	ENSG00000077943	tier1	-	-	34	0	0.00	17	14	45.16
ITK	0	genome.wustl.edu	37	5	156671417	156671417	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	5	156671417	156671417	C	T	SNP	ITK	ENST00000422843	human	ensembl	74_37	+1	known	silent	c.1378	p.L460	0.997	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_Znf_Btk_motif,pfam_SH3_domain,pfam_Pleckstrin_homology,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_Znf_Btk_motif,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Znf_Btk_motif,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	ITK	HGNC	ENSG00000113263	tier1	-	-	52	0	0.00	62	4	6.06
KCNB1	0	genome.wustl.edu	37	20	47991182	47991182	+	Silent	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	20	47991182	47991182	G	A	SNP	KCNB1	ENST00000371741	human	ensembl	74_37	-1	known	silent	c.915	p.L305	0.981	pfam_Ion_trans_dom,prints_K_chnl	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.1,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB1	HGNC	ENSG00000158445	tier1	-	-	21	0	0.00	23	9	28.12
KCNQ4	0	genome.wustl.edu	37	1	41300749	41300749	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	41300749	41300749	G	A	SNP	KCNQ4	ENST00000347132	human	ensembl	74_37	+1	known	missense	c.1724	p.R575Q	1.000	pfam_K_chnl_volt-dep_KCNQ_C	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ4	HGNC	ENSG00000117013	tier1	-	-	57	0	0.00	39	5	11.36
KCNQ5	0	genome.wustl.edu	37	6	73904443	73904443	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	73904443	73904443	T	C	SNP	KCNQ5	ENST00000402622	human	ensembl	74_37	+1	known	missense	c.2135	p.F712S	1.000	NULL	pfam_K_chnl_volt-dep_KCNQ_C,pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_volt-dep_KCNQ,prints_K_chnl	-	no_errors	KCNQ5	HGNC	ENSG00000185760	tier1	-	-	32	0	0.00	12	4	25.00
KDM4C	0	genome.wustl.edu	37	9	6986499	6986499	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	9	6986499	6986499	G	A	SNP	KDM4C	ENST00000381309	human	ensembl	74_37	+1	known	missense	c.1510	p.E504K	0.000	NULL	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,superfamily_Chorismate_mutase_type_II,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4C	HGNC	ENSG00000107077	tier1	-	-	64	0	0.00	11	20	64.52
KIAA1109	0	genome.wustl.edu	37	4	123258086	123258086	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	4	123258086	123258086	A	G	SNP	KIAA1109	ENST00000264501	human	ensembl	74_37	+1	known	missense	c.12061	p.M4021V	0.997	NULL	pfam_Fragile_site-assoc_C	-	no_errors	KIAA1109	HGNC	ENSG00000138688	tier1	-	-	33	0	0.00	15	22	59.46
KIAA1199	0	genome.wustl.edu	37	15	81235410	81235410	+	Frame_Shift_Del	DEL	A	A	-			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	15	81235410	81235410	A	-	DEL	KIAA1199	ENST00000220244	human	ensembl	74_37	+1	known	frame_shift_del	c.3824	p.Q1275fs	1.000	NULL	pfam_G8_domain,superfamily_Pectin_lyase_fold/virulence	-	no_errors	KIAA1199	HGNC	ENSG00000103888	tier1			59	0	0.00	16	12	42.86
KIF13A	0	genome.wustl.edu	37	6	17781431	17781431	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	17781431	17781431	T	C	SNP	KIF13A	ENST00000259711	human	ensembl	74_37	-1	known	missense	c.3646	p.I1216V	1.000	pfam_Kinesin-like	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF13A	HGNC	ENSG00000137177	tier1	-	-	38	0	0.00	38	7	15.56
KIF4A	0	genome.wustl.edu	37	X	69594099	69594099	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	X	69594099	69594099	A	T	SNP	KIF4A	ENST00000374403	human	ensembl	74_37	+1	known	missense	c.1773	p.Q591H	0.997	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF4A	HGNC	ENSG00000090889	tier1	-	-	18	0	0.00	8	13	61.90
KLHL20	0	genome.wustl.edu	37	1	173751271	173751271	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	173751271	173751271	G	T	SNP	KLHL20	ENST00000209884	human	ensembl	74_37	+1	known	missense	c.1648	p.A550S	1.000	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL20	HGNC	ENSG00000076321	tier1	-	-	115	0	0.00	66	12	15.00
KMT2D	0	genome.wustl.edu	37	12	49426774	49426774	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	49426774	49426774	T	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.11714	p.Q3905L	0.688	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				64	0	0.00	46	3	6.12
KRT73	0	genome.wustl.edu	37	12	53004427	53004427	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	53004427	53004427	G	T	SNP	KRT73	ENST00000305748	human	ensembl	74_37	-1	known	missense	c.1303	p.R435S	1.000	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT73	HGNC	ENSG00000186049				48	0	0.00	50	3	5.66
KRT81	0	genome.wustl.edu	37	12	52681102	52681102	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	52681102	52681102	G	C	SNP	KRT81	ENST00000327741	human	ensembl	74_37	-1	known	missense	c.1031	p.S344C	0.998	pfam_IF	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT81	HGNC	ENSG00000205426	tier1	-	-	31	0	0.00	24	9	27.27
LIG4	0	genome.wustl.edu	37	13	108863310	108863310	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	13	108863310	108863310	C	A	SNP	LIG4	ENST00000356922	human	ensembl	74_37	-1	known	nonsense	c.307	p.G103*	1.000	pfam_DNA_ligase_ATP-dep_N,superfamily_DNA_ligase_ATP-dep_N,tigrfam_DNA_ligase_ATP-dep	pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_DNA_ligase_IV,pfam_BRCT_dom,pfam_DNA_ligase_ATP-dep_C,superfamily_NA-bd_OB-fold,superfamily_BRCT_dom,superfamily_DNA_ligase_ATP-dep_N,smart_BRCT_dom,pfscan_BRCT_dom,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	-	no_errors	LIG4	HGNC	ENSG00000174405	tier1	-	-	37	0	0.00	16	6	27.27
LINC00982	0	genome.wustl.edu	37	1	2979294	2979294	+	RNA	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	2979294	2979294	C	T	SNP	LINC00982	ENST00000321399	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00982	HGNC	ENSG00000177133	tier1	-	-	76	0	0.00	82	16	16.33
LIPJ	0	genome.wustl.edu	37	10	90351161	90351161	+	Frame_Shift_Del	DEL	C	C	-			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	10	90351161	90351161	C	-	DEL	LIPJ	ENST00000371939	human	ensembl	74_37	+1	known	frame_shift_del	c.36	p.P13fs	0.996	pfam_AB_hydrolase_lipase	pfam_AB_hydrolase_lipase,pfam_AB_hydrolase_1	-	no_errors	LIPJ	HGNC	ENSG00000204022	tier1			57	0	0.00	18	2	10.00
LOC101930284	0	genome.wustl.edu	37	1	143230253	143230253	+	RNA	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	143230253	143230253	T	C	SNP	LOC101930284	ENST00000427309	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-782C8.5	Clone_based_vega_gene	ENSG00000225278	tier1	-	-	26	0	0.00	6	2	25.00
LRAT	0	genome.wustl.edu	37	4	155665738	155665738	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	4	155665738	155665738	G	A	SNP	LRAT	ENST00000336356	human	ensembl	74_37	+1	known	missense	c.260	p.R87H	0.260	NULL	pfam_LRAT-like_dom	-	no_errors	LRAT	HGNC	ENSG00000121207	tier1	-	-	20	0	0.00	2	8	80.00
LRBA	0	genome.wustl.edu	37	4	151791717	151791717	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	4	151791717	151791717	C	T	SNP	LRBA	ENST00000357115	human	ensembl	74_37	-1	known	silent	c.2409	p.Q803	0.975	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom	-	no_errors	LRBA	HGNC	ENSG00000198589				32	0	0.00	29	2	6.45
LRP2	0	genome.wustl.edu	37	2	170027101	170027101	+	Silent	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	170027101	170027101	A	G	SNP	LRP2	ENST00000263816	human	ensembl	74_37	-1	known	silent	c.11340	p.H3780	0.998	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,superfamily_TIL_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP2	HGNC	ENSG00000081479	tier1	-	-	68	0	0.00	15	30	66.67
LRRC37A3	0	genome.wustl.edu	37	17	62892916	62892916	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	17	62892916	62892916	G	T	SNP	LRRC37A3	ENST00000319651	human	ensembl	74_37	-1	known	missense	c.460	p.P154T	0.001	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC37A3	HGNC	ENSG00000176809	tier1	-	-	67	0	0.00	40	27	40.30
LRRC37A6P	0	genome.wustl.edu	37	10	27537671	27537671	+	RNA	SNP	A	A	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	10	27537671	27537671	A	T	SNP	LRRC37A6P	ENST00000284414	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	LRRC37A6P	HGNC	ENSG00000230445	tier1	-	-	169	0	0.00	108	55	33.74
LRRC4B	0	genome.wustl.edu	37	19	51022489	51022489	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	19	51022489	51022489	G	A	SNP	LRRC4B	ENST00000389201	human	ensembl	74_37	-1	known	missense	c.481	p.R161W	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRRC4B	HGNC	ENSG00000131409				92	0	0.00	54	3	5.26
MALAT1	0	genome.wustl.edu	37	11	65269897	65269898	+	RNA	INS	-	-	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	11	65269897	65269898	-	T	INS	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.985:0.013	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562	tier1			43	0	0.00	37	3	7.50
MAML2	0	genome.wustl.edu	37	11	95724824	95724825	+	Frame_Shift_Ins	INS	-	-	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	11	95724824	95724825	-	A	INS	MAML2	ENST00000524717	human	ensembl	74_37	-1	known	frame_shift_ins	c.2203_2202	p.P734fs	1.000:1.000	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML2	HGNC	ENSG00000184384	tier1			68	0	0.00	29	26	47.27
MARC2	0	genome.wustl.edu	37	1	220936256	220936256	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	220936256	220936256	C	T	SNP	MARC2	ENST00000366913	human	ensembl	74_37	+1	known	missense	c.614	p.A205V	1.000	pfam_MoCF_Sase_C,superfamily_Pyrv_Knase-like_insert_dom	pfam_MOSC_N,pfam_MoCF_Sase_C,superfamily_Pyrv_Knase-like_insert_dom	-	no_errors	MARC2	HGNC	ENSG00000117791	tier1	-	-	80	0	0.00	29	29	50.00
MCM3AP-AS1	0	genome.wustl.edu	37	21	47662235	47662235	+	RNA	DEL	T	T	-			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	21	47662235	47662235	T	-	DEL	MCM3AP-AS1	ENST00000421927	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.165	-	-	-	no_errors	MCM3AP-AS1	HGNC	ENSG00000215424	tier1			28	0	0.00	26	8	23.53
MGAM	0	genome.wustl.edu	37	7	141799444	141799444	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	7	141799444	141799444	A	G	SNP	MGAM	ENST00000549489	human	ensembl	74_37	+1	known	missense	c.5093	p.K1698R	0.006	pfam_Glyco_hydro_31	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335	tier1	-	-	100	0	0.00	38	49	56.32
MIA3	0	genome.wustl.edu	37	1	222803584	222803584	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	222803584	222803584	G	A	SNP	MIA3	ENST00000344441	human	ensembl	74_37	+1	known	missense	c.3022	p.E1008K	0.057	NULL	pfam_SH3_2,superfamily_SH3_domain	-	no_errors	MIA3	HGNC	ENSG00000154305				19	0	0.00	25	2	7.41
MIEN1	0	genome.wustl.edu	37	17	37886006	37886006	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	17	37886006	37886006	C	A	SNP	MIEN1	ENST00000394231	human	ensembl	74_37	-1	known	nonsense	c.196	p.E66*	1.000	pfam_Selenoprotein_Rdx-typ,superfamily_Thioredoxin-like_fold,tigrfam_Selenoprotein_Rdx-typ	pfam_Selenoprotein_Rdx-typ,superfamily_Thioredoxin-like_fold,tigrfam_Selenoprotein_Rdx-typ	-	no_errors	MIEN1	HGNC	ENSG00000141741				25	0	0.00	15	2	11.76
MORF4L1	0	genome.wustl.edu	37	15	79189830	79189830	+	RNA	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	15	79189830	79189830	G	T	SNP	MORF4L1	ENST00000561171	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MORF4L1	HGNC	ENSG00000185787	tier1	-	-	86	0	0.00	50	7	12.28
MROH2B	0	genome.wustl.edu	37	5	41015519	41015519	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	5	41015519	41015519	C	T	SNP	MROH2B	ENST00000399564	human	ensembl	74_37	-1	known	silent	c.2946	p.V982	0.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH2B	HGNC	ENSG00000171495	tier1	-	-	38	0	0.00	47	4	7.84
MRPL47	0	genome.wustl.edu	37	3	179322325	179322325	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	3	179322325	179322325	C	A	SNP	MRPL47	ENST00000476781	human	ensembl	74_37	-1	known	missense	c.88	p.A30S	0.002	NULL	pfam_Ribosomal_L47_mit	-	no_errors	MRPL47	HGNC	ENSG00000136522	tier1	-	-	33	0	0.00	35	4	10.26
MST1	0	genome.wustl.edu	37	3	49725034	49725034	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	3	49725034	49725034	T	A	SNP	MST1	ENST00000449682	human	ensembl	74_37	-1	known	missense	c.310	p.T104S	0.009	pfam_PAN-1_domain,smart_Pan_app,pfscan_Pan_app	pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	MST1	HGNC	ENSG00000173531	tier1	rs142964215	-	66	0	0.00	34	8	19.05
MST1	0	genome.wustl.edu	37	3	49725038	49725038	+	Silent	SNP	G	G	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	3	49725038	49725038	G	C	SNP	MST1	ENST00000449682	human	ensembl	74_37	-1	known	silent	c.306	p.P102	0.001	pfam_PAN-1_domain,smart_Pan_app,pfscan_Pan_app	pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	MST1	HGNC	ENSG00000173531	tier1	rs116125078	-	66	0	0.00	34	8	19.05
MT-CO2	0	genome.wustl.edu	37	MT	8009	8009	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	MT	8009	8009	G	A	SNP	MT-CO2	ENST00000361739	human	ensembl	74_37	+1	known	missense	c.424	p.V142M	NULL	pfam_Cyt_c_oxidase_su2_C,superfamily_Cupredoxin,pfscan_Cyt_c_oxidase_su2_C,tigrfam_Cyt_c_oxidase_su2	pfam_Cyt_c_oxidase_su2_C,pfam_Cyt_c_oxidase_su2_TM_dom,superfamily_Cupredoxin,superfamily_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_TM_dom,pfscan_Cyt_c_oxidase_su2_C,tigrfam_Cyt_c_oxidase_su2	-	no_errors	MT-CO2	HGNC	ENSG00000198712	tier1	rs199474826	-	87	0	0.00	76	26	25.49
MTR	0	genome.wustl.edu	37	1	237060945	237060946	+	RNA	INS	-	-	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	237060945	237060946	-	T	INS	MTR	ENST00000470570	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.008:0.000	-	-	-	no_errors	MTR	HGNC	ENSG00000116984	tier1			44	0	0.00	30	5	14.29
MYH7B	0	genome.wustl.edu	37	20	33567245	33567245	+	Silent	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	20	33567245	33567245	G	A	SNP	MYH7B	ENST00000262873	human	ensembl	74_37	+1	novel	silent	c.270	p.E90	0.999	pfam_Myosin_N,superfamily_Myosin_S1_N	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Myosin_S1_N,superfamily_Prefoldin,superfamily_tRNA-bd_arm,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7B	HGNC	ENSG00000078814	tier1	-	-	49	0	0.00	39	11	22.00
MYH9	0	genome.wustl.edu	37	22	36690174	36690174	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	22	36690174	36690174	C	T	SNP	MYH9	ENST00000216181	human	ensembl	74_37	-1	known	silent	c.3801	p.V1267	1.000	pfam_Myosin_tail,superfamily_STAT_TF_coiled-coil	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_Regulat_G_prot_signal_superfam,superfamily_Prefoldin,superfamily_Myosin_S1_N,superfamily_STAT_TF_coiled-coil,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH9	HGNC	ENSG00000100345	tier1	-	-	25	0	0.00	13	11	45.83
NCAM2	0	genome.wustl.edu	37	21	22841014	22841014	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	21	22841014	22841014	G	T	SNP	NCAM2	ENST00000400546	human	ensembl	74_37	+1	known	missense	c.1806	p.Q602H	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom,prints_Neural_cell_adh	-	no_errors	NCAM2	HGNC	ENSG00000154654				28	0	0.00	34	2	5.41
NLRP3	0	genome.wustl.edu	37	1	247588559	247588559	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	247588559	247588559	G	T	SNP	NLRP3	ENST00000336119	human	ensembl	74_37	+1	known	missense	c.1814	p.R605M	0.250	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP3	HGNC	ENSG00000162711				44	0	0.00	56	3	5.08
NOTCH1	0	genome.wustl.edu	37	9	139407900	139407900	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	9	139407900	139407900	C	G	SNP	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	missense	c.2297	p.G766A	1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_Notch,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400	tier1	-	-	69	0	0.00	16	17	51.52
NOTCH1	0	genome.wustl.edu	37	9	139407924	139407925	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	9	139407924	139407925	TC	-	DEL	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	frame_shift_del	c.2273_2272	p.E758fs	1.000:1.000	pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_Notch,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400	tier1			70	0	0.00	23	19	45.24
NOX3	0	genome.wustl.edu	37	6	155743924	155743924	+	Silent	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	155743924	155743924	G	A	SNP	NOX3	ENST00000159060	human	ensembl	74_37	-1	known	silent	c.1212	p.C404	0.999	pfam_Fe_red_NAD-bd_6,prints_Cyt_b245_heavy_chain	pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	NOX3	HGNC	ENSG00000074771				60	0	0.00	29	2	6.45
NPR2	0	genome.wustl.edu	37	9	35807138	35807138	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	9	35807138	35807138	A	T	SNP	NPR2	ENST00000342694	human	ensembl	74_37	+1	known	missense	c.2638	p.M880L	0.999	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Peripla_BP_I,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_A/G_cyclase,prints_Ntpep_rcpt,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	NPR2	HGNC	ENSG00000159899	tier1	-	-	21	0	0.00	9	10	52.63
NR1H3	0	genome.wustl.edu	37	11	47282123	47282123	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	11	47282123	47282123	C	T	SNP	NR1H3	ENST00000441012	human	ensembl	74_37	+1	known	silent	c.396	p.Y132	0.221	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Liver_X_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_ThyrH_rcpt,prints_Ecdystd_rcpt	-	no_errors	NR1H3	HGNC	ENSG00000025434	tier1	-	-	36	0	0.00	26	9	25.00
NRXN3	0	genome.wustl.edu	37	14	79111726	79111726	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	14	79111726	79111726	G	A	SNP	NRXN3	ENST00000554738	human	ensembl	74_37	+1	known	missense	c.1015	p.A339T	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN3	HGNC	ENSG00000021645	tier1	rs201052888	-	46	0	0.00	28	7	20.00
NSRP1	0	genome.wustl.edu	37	17	28512218	28512218	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	17	28512218	28512218	G	T	SNP	NSRP1	ENST00000247026	human	ensembl	74_37	+1	known	missense	c.1203	p.Q401H	0.000	NULL	pfam_DUF2040	-	no_errors	NSRP1	HGNC	ENSG00000126653	tier1	-	-	18	0	0.00	8	3	27.27
OR4K5	0	genome.wustl.edu	37	14	20389443	20389443	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	14	20389443	20389443	G	T	SNP	OR4K5	ENST00000315915	human	ensembl	74_37	+1	known	missense	c.678	p.W226C	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4K5	HGNC	ENSG00000176281	tier1	-	-	80	0	0.00	51	15	22.73
OR4K5	0	genome.wustl.edu	37	14	20389444	20389444	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	14	20389444	20389444	C	T	SNP	OR4K5	ENST00000315915	human	ensembl	74_37	+1	known	missense	c.679	p.L227F	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4K5	HGNC	ENSG00000176281	tier1	-	-	81	0	0.00	49	15	23.08
P2RX4	0	genome.wustl.edu	37	12	121647986	121647986	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	121647986	121647986	G	T	SNP	P2RX4	ENST00000337233	human	ensembl	74_37	+1	known	missense	c.19	p.A7S	0.002	prints_P2X4_purnocptor,prints_P2X1_purnocptor,tigrfam_P2X_purnocptor	pfam_P2X_purnocptor,prints_P2X4_purnocptor,prints_P2X_purnocptor,prints_P2X1_purnocptor,tigrfam_P2X_purnocptor	-	no_errors	P2RX4	HGNC	ENSG00000135124	tier1	-	-	17	0	0.00	5	8	61.54
PAPOLG	0	genome.wustl.edu	37	2	61009902	61009902	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	61009902	61009902	A	G	SNP	PAPOLG	ENST00000238714	human	ensembl	74_37	+1	known	missense	c.1109	p.Y370C	1.000	pfam_PolA_pol_RNA-bd_dom,superfamily_NuclTrfase_I_C,pirsf_PolyA_polymerase	pfam_PolA_pol_cen_dom,pfam_PolA_pol_RNA-bd_dom,pfam_Nucleotidyltransferase,superfamily_NuclTrfase_I_C,pirsf_PolyA_polymerase	-	no_errors	PAPOLG	HGNC	ENSG00000115421	tier1	-	-	32	0	0.00	24	13	35.14
PCDHA1	0	genome.wustl.edu	37	5	140168121	140168121	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	5	140168121	140168121	C	A	SNP	PCDHA1	ENST00000504120	human	ensembl	74_37	+1	known	nonsense	c.2246	p.S749*	0.941	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA1	HGNC	ENSG00000204970	tier1	-	-	58	0	0.00	36	22	37.93
PCLO	0	genome.wustl.edu	37	7	82580258	82580258	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	7	82580258	82580258	A	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.9646	p.L3216V	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	35	0	0.00	20	15	42.86
PCM1	0	genome.wustl.edu	37	8	17817936	17817936	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	8	17817936	17817936	G	A	SNP	PCM1	ENST00000325083	human	ensembl	74_37	+1	known	missense	c.2305	p.A769T	1.000	NULL	NULL	-	no_errors	PCM1	HGNC	ENSG00000078674	tier1	-	-	40	0	0.00	19	3	13.64
PCNXL4	0	genome.wustl.edu	37	14	60574805	60574805	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	14	60574805	60574805	C	T	SNP	PCNXL4	ENST00000404681	human	ensembl	74_37	+1	known	missense	c.449	p.A150V	0.021	NULL	pfam_Pecanex	-	no_errors	PCNXL4	HGNC	ENSG00000126773	tier1	-	-	41	0	0.00	16	12	42.86
PDS5B	0	genome.wustl.edu	37	13	33338643	33338643	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	13	33338643	33338643	A	G	SNP	PDS5B	ENST00000315596	human	ensembl	74_37	+1	known	missense	c.3535	p.M1179V	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	PDS5B	HGNC	ENSG00000083642	tier1	-	-	57	0	0.00	49	31	38.75
PEX7	0	genome.wustl.edu	37	6	137191072	137191072	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	137191072	137191072	G	T	SNP	PEX7	ENST00000318471	human	ensembl	74_37	+1	known	missense	c.678	p.W226C	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PEX7	HGNC	ENSG00000112357	tier1	-	-	87	0	0.00	58	4	6.35
PIK3CB	0	genome.wustl.edu	37	3	138400822	138400822	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	3	138400822	138400822	C	T	SNP	PIK3CB	ENST00000289153	human	ensembl	74_37	-1	known	missense	c.2491	p.G831S	1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_adapt-bd_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,superfamily_Kinase-like_dom,superfamily_C2_dom,superfamily_ARM-type_fold,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CB	HGNC	ENSG00000051382	tier1	-	-	40	0	0.00	46	6	11.54
PKHD1L1	0	genome.wustl.edu	37	8	110466969	110466969	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	8	110466969	110466969	C	T	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	silent	c.6762	p.S2254	0.826	pfam_G8_domain	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038	tier1	-	-	69	0	0.00	107	7	6.14
PLEKHH1	0	genome.wustl.edu	37	14	68038605	68038605	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	14	68038605	68038605	G	A	SNP	PLEKHH1	ENST00000329153	human	ensembl	74_37	+1	known	missense	c.1571	p.R524Q	1.000	NULL	pfam_Pleckstrin_homology,pfam_MyTH4_dom,pfam_FERM_central,superfamily_FERM_central,smart_Pleckstrin_homology,smart_MyTH4_dom,smart_Band_41_domain,pfscan_FERM_domain,pfscan_MyTH4_dom,pfscan_Pleckstrin_homology	-	no_errors	PLEKHH1	HGNC	ENSG00000054690	tier1	-	-	21	0	0.00	24	11	31.43
PLG	0	genome.wustl.edu	37	6	161152209	161152209	+	Silent	SNP	T	T	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	161152209	161152209	T	G	SNP	PLG	ENST00000308192	human	ensembl	74_37	+1	known	silent	c.1383	p.V461	0.000	pirsf_Pept_S1A_plasmin,superfamily_Kringle-like	pirsf_Pept_S1A_plasmin,pfam_Kringle,pfam_Peptidase_S1,pfam_PAN-1_domain,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_Pan_app,smart_Kringle,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Pan_app,pfscan_Kringle,pfscan_Peptidase_S1	-	no_errors	PLG	HGNC	ENSG00000122194	tier1	-	-	55	0	0.00	32	9	21.95
PLXNC1	0	genome.wustl.edu	37	12	94691141	94691141	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	94691141	94691141	G	A	SNP	PLXNC1	ENST00000258526	human	ensembl	74_37	+1	known	missense	c.4016	p.R1339Q	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Plexin_repeat,pfam_IPT,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Plexin-like_fold,superfamily_Ig_E-set,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNC1	HGNC	ENSG00000136040				45	0	0.00	37	2	5.13
PNPLA6	0	genome.wustl.edu	37	19	7622121	7622121	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	19	7622121	7622121	C	T	SNP	PNPLA6	ENST00000414982	human	ensembl	74_37	+1	known	silent	c.3378	p.P1126	0.844	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_cNMP-bd_dom,pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	PNPLA6	HGNC	ENSG00000032444	tier1	-	-	89	0	0.00	43	37	46.25
PPAP2A	0	genome.wustl.edu	37	5	54771153	54771153	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	5	54771153	54771153	T	C	SNP	PPAP2A	ENST00000307259	human	ensembl	74_37	-1	known	missense	c.184	p.I62V	1.000	superfamily_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAP2A	HGNC	ENSG00000067113	tier1	-	-	45	0	0.00	12	9	42.86
PPP2CA	0	genome.wustl.edu	37	5	133537546	133537546	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	5	133537546	133537546	T	C	SNP	PPP2CA	ENST00000481195	human	ensembl	74_37	-1	known	missense	c.479	p.D160G	1.000	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP2CA	HGNC	ENSG00000113575	tier1	-	-	44	0	0.00	40	17	29.82
PRDX2	0	genome.wustl.edu	37	19	12910723	12910723	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	19	12910723	12910723	T	A	SNP	PRDX2	ENST00000301522	human	ensembl	74_37	-1	known	missense	c.461	p.E154V	1.000	superfamily_Thioredoxin-like_fold	pfam_AhpC/TSA,pfam_Redoxin,pfam_Peroxiredoxin_C,superfamily_Thioredoxin-like_fold	-	no_errors	PRDX2	HGNC	ENSG00000167815	tier1	-	-	69	0	0.00	24	19	44.19
PROM2	0	genome.wustl.edu	37	2	95940353	95940353	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	95940353	95940353	T	A	SNP	PROM2	ENST00000317620	human	ensembl	74_37	+1	known	missense	c.20	p.L7Q	0.035	NULL	pfam_Prominin	-	no_errors	PROM2	HGNC	ENSG00000155066	tier1	-	-	73	0	0.00	61	19	23.75
PRR12	0	genome.wustl.edu	37	19	50128144	50128144	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	19	50128144	50128144	G	T	SNP	PRR12	ENST00000418929	human	ensembl	74_37	+1	novel	missense	c.5765	p.G1922V	0.972	NULL	NULL	-	no_errors	PRR12	HGNC	ENSG00000126464	tier1	-	-	33	0	0.00	22	4	15.38
PRR23A	0	genome.wustl.edu	37	3	138724597	138724597	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	3	138724597	138724597	C	T	SNP	PRR23A	ENST00000383163	human	ensembl	74_37	-1	known	missense	c.514	p.A172T	0.000	pfam_UPF0572	pfam_UPF0572	-	no_errors	PRR23A	HGNC	ENSG00000206260	tier1	-	-	35	0	0.00	25	13	34.21
PTHLH	0	genome.wustl.edu	37	12	28114898	28114898	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	28114898	28114898	T	-	DEL	PTHLH	ENST00000354417	human	ensembl	74_37	-1	known	frame_shift_del	c.557	p.K186fs	0.135	NULL	pfam_PTH/PTH-rel,smart_PTH/PTH-rel	-	no_errors	PTHLH	HGNC	ENSG00000087494	tier1			30	0	0.00	21	2	8.70
PTPN11	0	genome.wustl.edu	37	12	112891121	112891121	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	112891121	112891121	G	T	SNP	PTPN11	ENST00000351677	human	ensembl	74_37	+1	known	missense	c.455	p.R152L	1.000	pfam_SH2,smart_SH2,pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_SH2,prints_SH2	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_SH2,smart_SH2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_SH2,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_SH2	-	no_errors	PTPN11	HGNC	ENSG00000179295				38	0	0.00	36	2	5.26
RAVER1	0	genome.wustl.edu	37	19	10439506	10439506	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	19	10439506	10439506	T	G	SNP	RAVER1	ENST00000293677	human	ensembl	74_37	-1	known	missense	c.619	p.K207Q	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RAVER1	HGNC	ENSG00000161847	tier1	-	-	170	0	0.00	79	57	41.91
RAVER2	0	genome.wustl.edu	37	1	65268698	65268698	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	65268698	65268698	A	G	SNP	RAVER2	ENST00000294428	human	ensembl	74_37	+1	known	missense	c.1145	p.N382S	0.847	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RAVER2	HGNC	ENSG00000162437	tier1	-	-	56	0	0.00	25	10	28.57
REG3G	0	genome.wustl.edu	37	2	79253229	79253229	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	79253229	79253229	C	G	SNP	REG3G	ENST00000272324	human	ensembl	74_37	+1	known	missense	c.10	p.P4A	0.000	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	REG3G	HGNC	ENSG00000143954	tier1	-	-	101	0	0.00	51	33	39.29
REG3G	0	genome.wustl.edu	37	2	79253939	79253939	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	79253939	79253939	A	T	SNP	REG3G	ENST00000272324	human	ensembl	74_37	+1	known	missense	c.177	p.K59N	0.065	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	REG3G	HGNC	ENSG00000143954	tier1	-	-	45	0	0.00	24	21	46.67
REL	0	genome.wustl.edu	37	2	61149071	61149071	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	61149071	61149071	C	T	SNP	REL	ENST00000295025	human	ensembl	74_37	+1	known	missense	c.1261	p.R421C	0.290	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	REL	HGNC	ENSG00000162924	tier1	-	-	38	0	0.00	29	14	32.56
RGAG1	0	genome.wustl.edu	37	X	109697615	109697615	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	X	109697615	109697615	T	C	SNP	RGAG1	ENST00000465301	human	ensembl	74_37	+1	known	missense	c.3770	p.L1257P	0.954	NULL	NULL	-	no_errors	RGAG1	HGNC	ENSG00000243978	tier1	-	-	21	0	0.00	14	3	17.65
RGL2	0	genome.wustl.edu	37	6	33264024	33264024	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	33264024	33264024	G	C	SNP	RGL2	ENST00000497454	human	ensembl	74_37	-1	known	missense	c.549	p.D183E	1.000	superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,pfscan_Ras-like_Gua-exchang_fac_N	pfam_RasGRF_CDC25,pfam_Ras-assoc,pfam_Ras-like_Gua-exchang_fac_N,superfamily_Ras_GEF_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RGL2	HGNC	ENSG00000237441	tier1	-	-	55	0	0.00	21	19	47.50
ROM1	0	genome.wustl.edu	37	11	62381901	62381901	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	11	62381901	62381901	T	A	SNP	ROM1	ENST00000278833	human	ensembl	74_37	+1	known	missense	c.762	p.H254Q	0.003	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Peripherin/rom-1	-	no_errors	ROM1	HGNC	ENSG00000149489	tier1	-	-	24	0	0.00	8	11	57.89
ROS1	0	genome.wustl.edu	37	6	117609724	117609724	+	Silent	SNP	A	A	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	117609724	117609724	A	T	SNP	ROS1	ENST00000368508	human	ensembl	74_37	-1	known	silent	c.6975	p.P2325	0.998	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_LDLR_classB_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ROS1	HGNC	ENSG00000047936	tier1	-	-	111	0	0.00	61	18	22.78
RPA3-AS1	0	genome.wustl.edu	37	7	7713025	7713025	+	RNA	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	7	7713025	7713025	C	A	SNP	RPA3-AS1	ENST00000463725	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.193	-	-	-	no_errors	RPA3-AS1	HGNC	ENSG00000219545	tier1	-	-	94	0	0.00	85	33	27.97
RPN2	0	genome.wustl.edu	37	20	35827502	35827502	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	20	35827502	35827502	A	T	SNP	RPN2	ENST00000237530	human	ensembl	74_37	+1	known	missense	c.353	p.E118V	1.000	pfam_Swp1	pfam_Swp1	-	no_errors	RPN2	HGNC	ENSG00000118705	tier1	-	-	52	0	0.00	33	26	44.07
RRBP1	0	genome.wustl.edu	37	20	17639256	17639256	+	Nonsense_Mutation	SNP	T	T	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	20	17639256	17639256	T	A	SNP	RRBP1	ENST00000246043	human	ensembl	74_37	-1	known	nonsense	c.1897	p.K633*	1.000	NULL	pfam_Rib_rcpt_KP,superfamily_Ribosome_recyc_fac_dom	-	no_errors	RRBP1	HGNC	ENSG00000125844	tier1	-	-	69	0	0.00	25	24	48.98
RUNX1T1	0	genome.wustl.edu	37	8	93017523	93017523	+	Silent	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	8	93017523	93017523	G	T	SNP	RUNX1T1	ENST00000436581	human	ensembl	74_37	-1	known	silent	c.594	p.A198	1.000	pfam_TAFH_NHR1,smart_TAFH_NHR1,pfscan_TAFH_NHR1,prints_ETO	pfam_NHR2,pfam_TAFH_NHR1,pfam_Znf_MYND,smart_TAFH_NHR1,pfscan_TAFH_NHR1,pfscan_Znf_MYND,prints_ETO,prints_MTG8	-	no_errors	RUNX1T1	HGNC	ENSG00000079102	tier1	-	-	26	0	0.00	24	8	25.00
S100A11	0	genome.wustl.edu	37	1	152005018	152005018	+	RNA	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	152005018	152005018	T	C	SNP	S100A11	ENST00000478109	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	S100A11	HGNC	ENSG00000163191	tier1	-	-	33	0	0.00	34	6	15.00
SALL1	0	genome.wustl.edu	37	16	51173964	51173964	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	16	51173964	51173964	C	A	SNP	SALL1	ENST00000251020	human	ensembl	74_37	-1	known	missense	c.2169	p.M723I	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL1	HGNC	ENSG00000103449	tier1	-	-	71	0	0.00	15	22	59.46
SAP130	0	genome.wustl.edu	37	2	128712725	128712725	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	128712725	128712725	T	C	SNP	SAP130	ENST00000357702	human	ensembl	74_37	-1	known	missense	c.2335	p.I779V	1.000	NULL	NULL	-	no_errors	SAP130	HGNC	ENSG00000136715	tier1	-	-	44	0	0.00	38	15	28.30
SART3	0	genome.wustl.edu	37	12	108923976	108923976	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	108923976	108923976	G	A	SNP	SART3	ENST00000228284	human	ensembl	74_37	-1	known	missense	c.1858	p.P620S	0.008	NULL	pfam_RRM_dom,pfam_LSM_interact,smart_HAT,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SART3	HGNC	ENSG00000075856	tier1	-	-	30	0	0.00	6	18	75.00
SATL1	0	genome.wustl.edu	37	X	84363348	84363348	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	X	84363348	84363348	G	T	SNP	SATL1	ENST00000509231	human	ensembl	74_37	-1	known	missense	c.627	p.S209R	0.019	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	SATL1	HGNC	ENSG00000184788	tier1	-	-	66	0	0.00	34	42	55.26
SCAP	0	genome.wustl.edu	37	3	47469124	47469124	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	3	47469124	47469124	C	T	SNP	SCAP	ENST00000265565	human	ensembl	74_37	-1	known	silent	c.444	p.L148	1.000	NULL	pfam_Patched,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_SSD,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	SCAP	HGNC	ENSG00000114650	tier1	-	-	45	0	0.00	24	4	14.29
SCYL1	0	genome.wustl.edu	37	11	65293808	65293808	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	11	65293808	65293808	G	T	SNP	SCYL1	ENST00000270176	human	ensembl	74_37	+1	known	missense	c.589	p.V197F	0.002	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_ARM-type_fold,superfamily_Kinase-like_dom,pfscan_Prot_kinase_dom	-	no_errors	SCYL1	HGNC	ENSG00000142186	tier1	-	-	33	0	0.00	32	7	17.95
SEMA3D	0	genome.wustl.edu	37	7	84670056	84670056	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	7	84670056	84670056	C	G	SNP	SEMA3D	ENST00000284136	human	ensembl	74_37	-1	known	missense	c.979	p.D327H	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Ig_V-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3D	HGNC	ENSG00000153993	tier1	-	-	48	0	0.00	29	8	21.62
SEPHS1	0	genome.wustl.edu	37	10	13364865	13364865	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	10	13364865	13364865	G	C	SNP	SEPHS1	ENST00000327347	human	ensembl	74_37	-1	known	missense	c.934	p.L312V	1.000	pfam_AIR_synth_C_dom,superfamily_AIR_synth_C_dom,pirsf_SelD,tigrfam_SelD	pfam_AIR_synth_C_dom,pfam_AIR_synth_N_dom,superfamily_AIR_synth_C_dom,superfamily_PurM_N-like,pirsf_SelD,tigrfam_SelD	-	no_errors	SEPHS1	HGNC	ENSG00000086475	tier1	-	-	34	0	0.00	24	13	35.14
SHROOM3	0	genome.wustl.edu	37	4	77691999	77691999	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	4	77691999	77691999	G	T	SNP	SHROOM3	ENST00000296043	human	ensembl	74_37	+1	known	missense	c.5570	p.R1857L	1.000	pfam_ASD2	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771				30	0	0.00	14	2	12.50
SIPA1L1	0	genome.wustl.edu	37	14	72055491	72055491	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	14	72055491	72055491	A	G	SNP	SIPA1L1	ENST00000555818	human	ensembl	74_37	+1	known	missense	c.902	p.N301S	1.000	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L1	HGNC	ENSG00000197555				39	0	0.00	15	2	11.76
SLC16A6P1	0	genome.wustl.edu	37	17	62950487	62950487	+	RNA	SNP	A	A	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	17	62950487	62950487	A	T	SNP	SLC16A6P1	ENST00000577423	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.931	-	-	-	no_errors	SLC16A6P1	HGNC	ENSG00000232457	tier1	-	-	87	0	0.00	85	26	23.42
SLC22A7	0	genome.wustl.edu	37	6	43266909	43266909	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	43266909	43266909	G	A	SNP	SLC22A7	ENST00000498232	human	ensembl	74_37	+1	known	missense	c.473	p.G158D	0.000	NULL	NULL	-	no_errors	SLC22A7	HGNC	ENSG00000137204	tier1	-	-	34	0	0.00	38	5	11.63
SLC29A1	0	genome.wustl.edu	37	6	44199101	44199101	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	44199101	44199101	G	T	SNP	SLC29A1	ENST00000313248	human	ensembl	74_37	+1	known	missense	c.1004	p.G335V	1.000	pfam_Eqnu_transpt,superfamily_MFS_dom_general_subst_transpt,tigrfam_Eqnu_transpt	pfam_Eqnu_transpt,superfamily_MFS_dom_general_subst_transpt,prints_Eqnu_transpt,tigrfam_Eqnu_transpt	-	no_errors	SLC29A1	HGNC	ENSG00000112759	tier1	-	-	127	0	0.00	42	29	40.85
SLC7A6	0	genome.wustl.edu	37	16	68325543	68325543	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	16	68325543	68325543	C	A	SNP	SLC7A6	ENST00000219343	human	ensembl	74_37	+1	known	missense	c.1001	p.A334E	1.000	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A6	HGNC	ENSG00000103064	tier1	-	-	135	0	0.00	63	4	5.88
SOCS6	0	genome.wustl.edu	37	18	67993381	67993381	+	Silent	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	18	67993381	67993381	C	A	SNP	SOCS6	ENST00000397942	human	ensembl	74_37	+1	known	silent	c.1477	p.R493	0.997	smart_SOCS_C,pfscan_SOCS_C	pfam_SOCS_C,pfam_SH2,smart_SH2,smart_SOCS_C,pfscan_SOCS_C,pfscan_SH2	-	no_errors	SOCS6	HGNC	ENSG00000170677				85	0	0.00	37	2	5.00
SP1	0	genome.wustl.edu	37	12	53800472	53800472	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	53800472	53800472	C	T	SNP	SP1	ENST00000327443	human	ensembl	74_37	+1	known	silent	c.1779	p.P593	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SP1	HGNC	ENSG00000185591	tier1	-	-	48	0	0.00	24	22	47.83
SPACA7	0	genome.wustl.edu	37	13	113055455	113055455	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	13	113055455	113055455	G	T	SNP	SPACA7	ENST00000283550	human	ensembl	74_37	+1	known	missense	c.422	p.S141I	0.000	NULL	NULL	-	no_errors	SPACA7	HGNC	ENSG00000153498	tier1	-	-	67	0	0.00	71	4	5.33
SPATS2L	0	genome.wustl.edu	37	2	201281148	201281148	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	201281148	201281148	G	T	SNP	SPATS2L	ENST00000409755	human	ensembl	74_37	+1	known	missense	c.285	p.K95N	1.000	pfam_DUF1387,superfamily_UBA-like	pfam_DUF1387,superfamily_UBA-like	-	no_errors	SPATS2L	HGNC	ENSG00000196141	tier1	-	-	60	0	0.00	44	11	20.00
SRSF11	0	genome.wustl.edu	37	1	70716996	70716996	+	RNA	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	1	70716996	70716996	A	G	SNP	SRSF11	ENST00000461935	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SRSF11	HGNC	ENSG00000116754	tier1	-	-	93	0	0.00	45	16	26.23
SSFA2	0	genome.wustl.edu	37	2	182766967	182766967	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	182766967	182766967	G	T	SNP	SSFA2	ENST00000431877	human	ensembl	74_37	+1	known	missense	c.1187	p.S396I	0.000	NULL	NULL	-	no_errors	SSFA2	HGNC	ENSG00000138434	tier1	-	-	30	0	0.00	35	4	10.26
STK39	0	genome.wustl.edu	37	2	168811130	168811130	+	RNA	SNP	T	T	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	2	168811130	168811130	T	G	SNP	STK39	ENST00000487143	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.937	-	-	-	no_errors	STK39	HGNC	ENSG00000198648	tier1	-	-	29	0	0.00	11	15	57.69
STL	0	genome.wustl.edu	37	6	125269130	125269130	+	RNA	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	125269130	125269130	G	T	SNP	STL	ENST00000439075	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-510H23.1	Clone_based_vega_gene	ENSG00000236548	tier1	-	-	28	0	0.00	19	3	13.64
SYNE3	0	genome.wustl.edu	37	14	95932472	95932472	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	14	95932472	95932472	C	A	SNP	SYNE3	ENST00000334258	human	ensembl	74_37	-1	known	missense	c.423	p.E141D	1.000	NULL	pfam_KASH,pfam_Spectrin_repeat,superfamily_Retrov_capsid_C,smart_Spectrin/alpha-actinin,pfscan_KASH	-	no_errors	SYNE3	HGNC	ENSG00000176438	tier1	-	-	58	0	0.00	36	17	32.08
TAS2R7	0	genome.wustl.edu	37	12	10954348	10954348	+	Silent	SNP	A	A	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	12	10954348	10954348	A	T	SNP	TAS2R7	ENST00000240687	human	ensembl	74_37	-1	known	silent	c.822	p.A274	0.002	pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_TAS2_rcpt,pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	TAS2R7	HGNC	ENSG00000121377	tier1	-	-	35	0	0.00	26	5	16.13
TCAM1P	0	genome.wustl.edu	37	17	61939715	61939715	+	RNA	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	17	61939715	61939715	C	A	SNP	TCAM1P	ENST00000478379	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.037	-	-	-	no_errors	TCAM1P	HGNC	ENSG00000240280				51	0	0.00	34	4	10.53
TCAM1P	0	genome.wustl.edu	37	17	61939720	61939720	+	RNA	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	17	61939720	61939720	G	A	SNP	TCAM1P	ENST00000478379	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.146	-	-	-	no_errors	TCAM1P	HGNC	ENSG00000240280				49	0	0.00	32	5	13.51
TFPT	0	genome.wustl.edu	37	19	54617971	54617971	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	19	54617971	54617971	C	T	SNP	TFPT	ENST00000391759	human	ensembl	74_37	-1	known	missense	c.133	p.V45M	1.000	NULL	NULL	-	no_errors	TFPT	HGNC	ENSG00000105619	tier1	-	-	35	0	0.00	11	15	57.69
TMCO3	0	genome.wustl.edu	37	13	114201522	114201522	+	RNA	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	13	114201522	114201522	A	G	SNP	TMCO3	ENST00000491166	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TMCO3	HGNC	ENSG00000150403	tier1	-	-	50	0	0.00	34	17	33.33
TMEM260	0	genome.wustl.edu	37	14	57113980	57113980	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	14	57113980	57113980	A	G	SNP	TMEM260	ENST00000261556	human	ensembl	74_37	+1	known	missense	c.1889	p.Y630C	0.001	NULL	pfam_DUF2723	-	no_errors	TMEM260	HGNC	ENSG00000070269	tier1	rs61739407	-	28	0	0.00	11	8	42.11
TMPRSS11A	0	genome.wustl.edu	37	4	68812229	68812229	+	Silent	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	4	68812229	68812229	A	G	SNP	TMPRSS11A	ENST00000334830	human	ensembl	74_37	-1	known	silent	c.72	p.I24	0.000	pirsf_Pept_S1A_HAT/DESC1	pfam_Peptidase_S1,pfam_SEA_dom,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pirsf_Pept_S1A_HAT/DESC1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS11A	HGNC	ENSG00000187054	tier1	-	-	34	0	0.00	8	5	38.46
TNFSF12-TNFSF13	0	genome.wustl.edu	37	17	7452584	7452584	+	Silent	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	17	7452584	7452584	G	A	SNP	TNFSF12-TNFSF13	ENST00000293826	human	ensembl	74_37	+1	known	silent	c.114	p.L38	1.000	NULL	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom	-	no_errors	TNFSF12-TNFSF13	HGNC	ENSG00000248871				11	0	0.00	4	3	42.86
TOX3	0	genome.wustl.edu	37	16	52473564	52473564	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	16	52473564	52473564	G	A	SNP	TOX3	ENST00000219746	human	ensembl	74_37	-1	known	missense	c.1304	p.S435L	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TOX3	HGNC	ENSG00000103460				91	0	0.00	56	3	5.08
TP53	0	genome.wustl.edu	37	17	7578457	7578457	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	17	7578457	7578457	C	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.473	p.R158L	0.989	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	409	0	0.00	160	204	56.04
TRIM38	0	genome.wustl.edu	37	6	25983525	25983525	+	Silent	SNP	C	C	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	6	25983525	25983525	C	G	SNP	TRIM38	ENST00000349458	human	ensembl	74_37	+1	known	silent	c.1008	p.V336	0.993	superfamily_ConA-like_lec_gl_sf,smart_PRY,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM38	HGNC	ENSG00000112343	tier1	-	-	121	0	0.00	56	27	32.53
TSHZ2	0	genome.wustl.edu	37	20	51872057	51872057	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	20	51872057	51872057	C	T	SNP	TSHZ2	ENST00000371497	human	ensembl	74_37	+1	known	missense	c.2060	p.P687L	0.236	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ2	HGNC	ENSG00000182463				18	0	0.00	19	3	13.64
USP46	0	genome.wustl.edu	37	4	53476753	53476753	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	4	53476753	53476753	G	T	SNP	USP46	ENST00000441222	human	ensembl	74_37	-1	known	missense	c.592	p.L198I	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP46	HGNC	ENSG00000109189	tier1	-	-	34	0	0.00	22	3	12.00
VAC14	0	genome.wustl.edu	37	16	70796868	70796868	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	16	70796868	70796868	G	T	SNP	VAC14	ENST00000261776	human	ensembl	74_37	-1	known	missense	c.1221	p.H407Q	1.000	superfamily_ARM-type_fold	pfam_VAC14_Fig4p-bd,pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	VAC14	HGNC	ENSG00000103043	tier1	-	-	73	0	0.00	51	4	7.27
VSIG4	0	genome.wustl.edu	37	X	65259808	65259808	+	Silent	SNP	C	C	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	X	65259808	65259808	C	T	SNP	VSIG4	ENST00000374737	human	ensembl	74_37	-1	known	silent	c.33	p.G11	0.065	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	VSIG4	HGNC	ENSG00000155659	tier1	-	-	35	0	0.00	7	27	79.41
WDR81	0	genome.wustl.edu	37	17	1637328	1637328	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	17	1637328	1637328	G	A	SNP	WDR81	ENST00000409644	human	ensembl	74_37	+1	known	missense	c.4997	p.G1666D	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Kinase-like_dom,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR81	HGNC	ENSG00000167716	tier1	-	-	54	0	0.00	35	4	10.26
ZC3H18	0	genome.wustl.edu	37	16	88694049	88694049	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	16	88694049	88694049	G	A	SNP	ZC3H18	ENST00000301011	human	ensembl	74_37	+1	known	missense	c.2128	p.V710I	1.000	NULL	smart_Znf_CCCH	-	no_errors	ZC3H18	HGNC	ENSG00000158545	tier1	-	-	65	0	0.00	24	26	52.00
ZCCHC7	0	genome.wustl.edu	37	9	37357249	37357250	+	Frame_Shift_Ins	INS	-	-	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	9	37357249	37357250	0	A	INS	ZCCHC7	ENST00000336755	human	ensembl	74_37	+1	known	frame_shift_ins	c.1616_1617	p.K543fs	1.000:1.000	NULL	pfam_Znf_CCHC,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC7	HGNC	ENSG00000147905				14	0	0.00	5	3	37.50
ZNF211	0	genome.wustl.edu	37	19	58153099	58153099	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	19	58153099	58153099	C	A	SNP	ZNF211	ENST00000240731	human	ensembl	74_37	+1	known	missense	c.1284	p.H428Q	0.005	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF211	HGNC	ENSG00000121417	tier1	-	-	52	0	0.00	8	18	69.23
ZNF285	0	genome.wustl.edu	37	19	44891003	44891003	+	Silent	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	19	44891003	44891003	G	A	SNP	ZNF285	ENST00000330997	human	ensembl	74_37	-1	known	silent	c.1404	p.S468	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF285	HGNC	ENSG00000267508	tier1	rs201302972	-	61	0	0.00	29	5	14.71
ZNF485	0	genome.wustl.edu	37	10	44112021	44112021	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	10	44112021	44112021	A	G	SNP	ZNF485	ENST00000361807	human	ensembl	74_37	+1	known	missense	c.530	p.H177R	0.457	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF485	HGNC	ENSG00000198298	tier1	-	-	41	0	0.00	22	14	38.89
ZNF551	0	genome.wustl.edu	37	19	58199504	58199504	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	19	58199504	58199504	G	T	SNP	ZNF551	ENST00000282296	human	ensembl	74_37	+1	known	missense	c.1861	p.G621W	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF551	HGNC	ENSG00000204519				53	0	0.00	23	3	11.54
ZNF592	0	genome.wustl.edu	37	15	85345259	85345259	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	15	85345259	85345259	C	G	SNP	ZNF592	ENST00000299927	human	ensembl	74_37	+1	known	missense	c.3439	p.Q1147E	0.953	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF592	HGNC	ENSG00000166716	tier1	-	-	87	0	0.00	16	35	67.31
ZNF696	0	genome.wustl.edu	37	8	144378416	144378416	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	8	144378416	144378416	G	T	SNP	ZNF696	ENST00000330143	human	ensembl	74_37	+1	known	missense	c.571	p.G191C	0.154	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF696	HGNC	ENSG00000185730	tier1	-	-	41	0	0.00	44	10	18.52
ZNF727	0	genome.wustl.edu	37	7	63537695	63537695	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A1-01A-21D-A27G-09	TCGA-LN-A4A1-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a03ef5d0-0cf8-4303-941f-4e3045612671	be17983e-aeb5-495e-a39c-6bf4aa0baf9a	7	63537695	63537695	G	A	SNP	ZNF727	ENST00000550760	human	ensembl	74_37	+1	known	missense	c.268	p.D90N	0.080	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF727	HGNC	ENSG00000257482	tier1	-	-	24	0	0.00	22	12	35.29
