Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA8	0	genome.wustl.edu	37	17	66873731	66873731	+	Silent	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	17	66873731	66873731	C	G	SNP	ABCA8	ENST00000430352	human	ensembl	74_37	-1	known	silent	c.4128	p.V1376	0.997	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA8	HGNC	ENSG00000141338	tier1	-	-	102	0	0.00	49	44	47.31
ABCC11	0	genome.wustl.edu	37	16	48261862	48261862	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	16	48261862	48261862	G	T	SNP	ABCC11	ENST00000356608	human	ensembl	74_37	-1	known	missense	c.250	p.Q84K	0.000	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC11	HGNC	ENSG00000121270				39	0	0.00	30	3	9.09
ABCC12	0	genome.wustl.edu	37	16	48180286	48180286	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	16	48180286	48180286	C	A	SNP	ABCC12	ENST00000311303	human	ensembl	74_37	-1	known	missense	c.50	p.R17L	0.000	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC12	HGNC	ENSG00000140798	tier1	-	-	52	0	0.00	33	26	44.07
ACVR1B	0	genome.wustl.edu	37	12	52380769	52380769	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	52380769	52380769	A	T	SNP	ACVR1B	ENST00000415850	human	ensembl	74_37	+1	known	missense	c.1304	p.D435V	0.000	smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ACVR1B	HGNC	ENSG00000135503	tier1	-	-	66	0	0.00	31	41	56.94
ADCY7	0	genome.wustl.edu	37	16	50334758	50334758	+	Silent	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	16	50334758	50334758	C	T	SNP	ADCY7	ENST00000254235	human	ensembl	74_37	+1	known	silent	c.1209	p.N403	1.000	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY7	HGNC	ENSG00000121281	tier1	-	-	66	0	0.00	39	4	9.30
AFF3	0	genome.wustl.edu	37	2	100210147	100210147	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	100210147	100210147	A	G	SNP	AFF3	ENST00000356421	human	ensembl	74_37	-1	known	missense	c.2051	p.V684A	0.993	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF3	HGNC	ENSG00000144218	tier1	-	-	36	0	0.00	24	11	31.43
ALG6	0	genome.wustl.edu	37	1	63894627	63894629	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	63894627	63894629	CTC	-	DEL	ALG6	ENST00000371108	human	ensembl	74_37	+1	known	in_frame_del	c.1156_1158	p.L387in_frame_del	0.938:0.946:0.826	pfam_Glyco_trans_ALG6/ALG8	pfam_Glyco_trans_ALG6/ALG8	-	no_errors	ALG6	HGNC	ENSG00000088035	tier1			8	0	0.00	16	8	33.33
AMOT	0	genome.wustl.edu	37	X	112065833	112065833	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	X	112065833	112065833	C	G	SNP	AMOT	ENST00000371959	human	ensembl	74_37	-1	known	missense	c.522	p.L174F	0.999	NULL	pfam_Angiomotin_C,superfamily_Prefoldin,prints_Angiomotin	-	no_errors	AMOT	HGNC	ENSG00000126016				17	0	0.00	19	4	17.39
ANKRD13C	0	genome.wustl.edu	37	1	70819708	70819708	+	Silent	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	70819708	70819708	G	C	SNP	ANKRD13C	ENST00000370944	human	ensembl	74_37	-1	known	silent	c.384	p.L128	0.986	superfamily_Ankyrin_rpt-contain_dom	pfam_ANKRD13,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD13C	HGNC	ENSG00000118454	tier1	-	-	53	0	0.00	48	11	18.64
ANKRD17	0	genome.wustl.edu	37	4	74027042	74027042	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	4	74027042	74027042	C	T	SNP	ANKRD17	ENST00000358602	human	ensembl	74_37	-1	known	missense	c.571	p.D191N	1.000	NULL	pfam_Ankyrin_rpt,pfam_KH_dom_type_1,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_KH_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_KH_dom_type_1,prints_Ankyrin_rpt	-	no_errors	ANKRD17	HGNC	ENSG00000132466	tier1	-	-	39	0	0.00	48	4	7.69
ANKRD30B	0	genome.wustl.edu	37	18	14763720	14763720	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	18	14763720	14763720	C	T	SNP	ANKRD30B	ENST00000358984	human	ensembl	74_37	+1	known	missense	c.856	p.P286S	0.006	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30B	HGNC	ENSG00000180777	tier1	-	-	73	0	0.00	37	20	33.90
ANO2	0	genome.wustl.edu	37	12	5842179	5842179	+	RNA	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	5842179	5842179	C	T	SNP	ANO2	ENST00000542326	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	ANO2	HGNC	ENSG00000047617	tier1	-	-	21	0	0.00	293	80	21.33
ANO2	0	genome.wustl.edu	37	12	5842200	5842200	+	RNA	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	5842200	5842200	C	T	SNP	ANO2	ENST00000542326	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	ANO2	HGNC	ENSG00000047617	tier1	-	-	18	0	0.00	222	55	19.86
APEH	0	genome.wustl.edu	37	3	49714115	49714115	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	49714115	49714115	G	T	SNP	APEH	ENST00000296456	human	ensembl	74_37	+1	known	missense	c.818	p.R273L	1.000	NULL	pfam_Peptidase_S9,pfam_AB_hydrolase_1,pfam_Dienelactn_hydro	-	no_errors	APEH	HGNC	ENSG00000164062	tier1	-	-	183	0	0.00	41	51	55.43
APH1A	0	genome.wustl.edu	37	1	150238561	150238561	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	150238561	150238561	T	-	DEL	APH1A	ENST00000369109	human	ensembl	74_37	-1	known	frame_shift_del	c.767	p.Y256fs	1.000	NULL	pfam_Aph-1	-	no_errors	APH1A	HGNC	ENSG00000117362	tier1			29	0	0.00	30	16	34.78
ARRB1	0	genome.wustl.edu	37	11	74985232	74985232	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	11	74985232	74985232	G	A	SNP	ARRB1	ENST00000393505	human	ensembl	74_37	-1	known	missense	c.800	p.T267M	0.959	pfam_Arrestin_C-like,superfamily_Ig_E-set	pfam_Arrestin-like_N,pfam_Arrestin_C-like,superfamily_Ig_E-set,prints_Arrestin	-	no_errors	ARRB1	HGNC	ENSG00000137486	tier1	rs200557530	-	79	0	0.00	15	25	62.50
ASTL	0	genome.wustl.edu	37	2	96799172	96799172	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	96799172	96799172	G	-	DEL	ASTL	ENST00000342380	human	ensembl	74_37	-1	known	frame_shift_del	c.447	p.M150fs	0.998	pfam_Peptidase_M12A,smart_Peptidase_Metallo	pfam_Peptidase_M12A,smart_Peptidase_Metallo,prints_Peptidase_M12A	-	no_errors	ASTL	HGNC	ENSG00000188886	tier1			48	0	0.00	32	2	5.88
ATP2B4	0	genome.wustl.edu	37	1	203669435	203669435	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	203669435	203669435	G	A	SNP	ATP2B4	ENST00000357681	human	ensembl	74_37	+1	known	missense	c.751	p.D251N	0.999	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B4	HGNC	ENSG00000058668	tier1	-	-	53	0	0.00	55	4	6.78
ATP6V0B	0	genome.wustl.edu	37	1	44442966	44442966	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	44442966	44442966	C	G	SNP	ATP6V0B	ENST00000532642	human	ensembl	74_37	+1	putative	missense	c.669	p.C223W	0.000	NULL	pfam_ATPase_proteolipid_c_like_dom,superfamily_ATPase_proteolipid_c_like_dom,prints_ATPase_proteolipid_csu	-	no_errors	ATP6V0B	HGNC	ENSG00000117410	tier1	-	-	34	0	0.00	12	10	45.45
ATR	0	genome.wustl.edu	37	3	142168307	142168307	+	Silent	SNP	T	T	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	142168307	142168307	T	A	SNP	ATR	ENST00000350721	human	ensembl	74_37	-1	known	silent	c.7899	p.L2633	0.289	pfam_FATC,smart_PI3/4_kinase_cat_dom,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	pfam_PI3/4_kinase_cat_dom,pfam_PIK-rel_kinase_FAT,pfam_UME,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_UME,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_HEAT_type_2,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATR	HGNC	ENSG00000175054	tier1	-	-	67	0	0.00	52	9	14.75
ATRNL1	0	genome.wustl.edu	37	10	117607407	117607407	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	10	117607407	117607407	C	T	SNP	ATRNL1	ENST00000355044	human	ensembl	74_37	+1	known	missense	c.3923	p.A1308V	1.000	NULL	pfam_Kelch_1,pfam_Kelch_2,pfam_Plexin_repeat,pfam_CUB_dom,pfam_EGF_extracell,superfamily_C-type_lectin_fold,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_EG-like_dom,smart_CUB_dom,smart_Plexin-like_fold,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRNL1	HGNC	ENSG00000107518	tier1	-	-	52	0	0.00	50	4	7.41
BAI2	0	genome.wustl.edu	37	1	32205214	32205214	+	Silent	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	32205214	32205214	G	C	SNP	BAI2	ENST00000373658	human	ensembl	74_37	-1	known	silent	c.2190	p.P730	0.018	pfam_DUF3497	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI2	HGNC	ENSG00000121753	tier1	-	-	39	0	0.00	23	16	41.03
BCMO1	0	genome.wustl.edu	37	16	81324181	81324181	+	Nonstop_Mutation	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	16	81324181	81324181	G	C	SNP	BCMO1	ENST00000258168	human	ensembl	74_37	+1	known	nonstop	c.1643	p.*548S	0.054	NULL	pfam_Carotenoid_Oase	-	no_errors	BCMO1	HGNC	ENSG00000135697	tier1	-	-	39	0	0.00	43	9	17.31
BLM	0	genome.wustl.edu	37	15	91303325	91303326	+	Frame_Shift_Ins	INS	-	-	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	15	91303325	91303326	-	T	INS	BLM	ENST00000559724	human	ensembl	74_37	+1	known	frame_shift_ins	c.1202_1203	p.F405fs	0.000:0.021	NULL	NULL	-	no_errors	BLM	HGNC	ENSG00000197299	tier1			27	0	0.00	29	5	14.71
BRPF1	0	genome.wustl.edu	37	3	9786770	9786770	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	9786770	9786770	T	-	DEL	BRPF1	ENST00000383829	human	ensembl	74_37	+1	known	frame_shift_del	c.2999	p.R1002fs	1.000	NULL	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP_dom,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_PHD-finger,pfscan_Znf_C2H2,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRPF1	HGNC	ENSG00000156983	tier1			56	0	0.00	12	2	14.29
BZW2	0	genome.wustl.edu	37	7	16685805	16685805	+	RNA	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	7	16685805	16685805	C	T	SNP	BZW2	ENST00000432311	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	BZW2	HGNC	ENSG00000136261	tier1	-	-	124	0	0.00	40	49	55.06
C18orf8	0	genome.wustl.edu	37	18	21111652	21111652	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	18	21111652	21111652	G	A	SNP	C18orf8	ENST00000269221	human	ensembl	74_37	+1	known	missense	c.1958	p.R653K	1.000	NULL	pfam_Mic1,superfamily_WD40_repeat_dom	-	no_errors	C18orf8	HGNC	ENSG00000141452	tier1	-	-	28	0	0.00	23	7	23.33
C3orf20	0	genome.wustl.edu	37	3	14803014	14803014	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	14803014	14803014	G	A	SNP	C3orf20	ENST00000253697	human	ensembl	74_37	+1	known	missense	c.2387	p.R796H	0.535	NULL	NULL	-	no_errors	C3orf20	HGNC	ENSG00000131379				61	0	0.00	30	2	6.25
CACNA1E	0	genome.wustl.edu	37	1	181767730	181767730	+	Silent	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	181767730	181767730	C	T	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	silent	c.6702	p.A2234	0.991	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	tier1	-	-	55	0	0.00	45	4	8.16
CACNA2D1	0	genome.wustl.edu	37	7	81714152	81714152	+	Silent	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	7	81714152	81714152	G	T	SNP	CACNA2D1	ENST00000356253	human	ensembl	74_37	-1	known	silent	c.591	p.R197	0.949	pfam_VWA_N	pfam_VDCC_a2/dsu,pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D1	HGNC	ENSG00000153956	tier1	-	-	34	0	0.00	55	4	6.78
CACNA2D1	0	genome.wustl.edu	37	7	82072745	82072745	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	7	82072745	82072745	G	T	SNP	CACNA2D1	ENST00000356253	human	ensembl	74_37	-1	known	missense	c.31	p.L11M	1.000	NULL	pfam_VDCC_a2/dsu,pfam_VWA_N,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D1	HGNC	ENSG00000153956				38	0	0.00	37	2	5.13
CAPN2	0	genome.wustl.edu	37	1	223962880	223962880	+	RNA	DEL	A	A	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	223962880	223962880	A	-	DEL	CAPN2	ENST00000463997	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	CAPN2	HGNC	ENSG00000162909	tier1			35	0	0.00	30	3	9.09
CASP5	0	genome.wustl.edu	37	11	104878041	104878041	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	11	104878041	104878041	T	-	DEL	CASP5	ENST00000393141	human	ensembl	74_37	-1	known	frame_shift_del	c.241	p.T81fs	0.000	pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,pirsf_Caspase_IL-1_beta,pfscan_CARD	pfam_Pept_C14_caspase,pfam_CARD,superfamily_DEATH-like_dom,smart_CARD,smart_Pept_C14A_p45_core,pirsf_Caspase_IL-1_beta,pfscan_CARD,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP5	HGNC	ENSG00000137757	tier1			20	0	0.00	23	4	14.81
CCDC41	0	genome.wustl.edu	37	12	94772658	94772658	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	94772658	94772658	T	A	SNP	CCDC41	ENST00000339839	human	ensembl	74_37	-1	known	missense	c.710	p.E237V	1.000	NULL	NULL	-	no_errors	CCDC41	HGNC	ENSG00000173588	tier1	-	-	68	0	0.00	49	45	47.87
CCNF	0	genome.wustl.edu	37	16	2487242	2487242	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	16	2487242	2487242	C	G	SNP	CCNF	ENST00000397066	human	ensembl	74_37	+1	known	missense	c.459	p.I153M	1.000	NULL	pfam_Cyclin_N,pfam_Cyclin_C-dom,pfam_F-box_dom,superfamily_Cyclin-like,superfamily_F-box_dom,smart_F-box_dom,smart_Cyclin-like,pfscan_F-box_dom	-	no_errors	CCNF	HGNC	ENSG00000162063				43	0	0.00	31	3	8.82
CCPG1	0	genome.wustl.edu	37	15	55681620	55681620	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	15	55681620	55681620	C	A	SNP	CCPG1	ENST00000310958	human	ensembl	74_37	-1	known	missense	c.3	p.M1I	1.000	NULL	NULL	-	no_errors	CCPG1	HGNC	ENSG00000260916				26	0	0.00	30	2	6.25
CCR10	0	genome.wustl.edu	37	17	40832242	40832242	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	17	40832242	40832242	C	A	SNP	CCR10	ENST00000332438	human	ensembl	74_37	-1	known	missense	c.418	p.V140L	0.985	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CCR10,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt	-	no_errors	CCR10	HGNC	ENSG00000184451	tier1	-	-	14	0	0.00	6	7	53.85
CD163	0	genome.wustl.edu	37	12	7649729	7649729	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	7649729	7649729	T	C	SNP	CD163	ENST00000359156	human	ensembl	74_37	-1	known	missense	c.779	p.K260R	0.049	superfamily_Srcr_rcpt-rel	pfam_SRCR,superfamily_Srcr_rcpt-rel,smart_Srcr_rcpt-rel,prints_SRCR,pfscan_SRCR	-	no_errors	CD163	HGNC	ENSG00000177575	tier1	-	-	69	0	0.00	137	36	20.81
CD4	0	genome.wustl.edu	37	12	6924124	6924124	+	Silent	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	6924124	6924124	G	A	SNP	CD4	ENST00000011653	human	ensembl	74_37	+1	known	silent	c.573	p.K191	0.000	pfam_Ig_C2-set,smart_Ig_sub,smart_Ig_sub2	pfam_CD4-extracel,pfam_Ig_C2-set,pfam_Tcell_CD4_Cterm,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ig_I-set,pfam_NK_rcpt_2B4_Ig_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom,prints_Ag_CD4	-	no_errors	CD4	HGNC	ENSG00000010610	tier1	-	-	36	0	0.00	52	7	11.86
CDH10	0	genome.wustl.edu	37	5	24488069	24488069	+	Silent	SNP	A	A	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	5	24488069	24488069	A	G	SNP	CDH10	ENST00000264463	human	ensembl	74_37	-1	known	silent	c.2070	p.I690	0.998	pfam_Cadherin_cytoplasmic-dom	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	CDH10	HGNC	ENSG00000040731	tier1	-	-	30	0	0.00	12	16	57.14
CEACAM18	0	genome.wustl.edu	37	19	51986564	51986564	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	51986564	51986564	C	A	SNP	CEACAM18	ENST00000451626	human	ensembl	74_37	+1	known	missense	c.1150	p.P384T	0.002	NULL	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CEACAM18	HGNC	ENSG00000213822	tier1	-	-	61	0	0.00	23	20	45.45
CEPT1	0	genome.wustl.edu	37	1	111724581	111724582	+	RNA	INS	-	-	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	111724581	111724582	-	T	INS	CEPT1	ENST00000467362	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007:0.000	-	-	-	no_errors	CEPT1	HGNC	ENSG00000134255	tier1			8	0	0.00	10	4	28.57
CHD2	0	genome.wustl.edu	37	15	93515583	93515583	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	15	93515583	93515583	C	G	SNP	CHD2	ENST00000557381	human	ensembl	74_37	+1	putative	missense	c.2441	p.S814C	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD2	HGNC	ENSG00000173575	tier1	-	-	28	0	0.00	53	4	7.02
CIC	0	genome.wustl.edu	37	19	42793154	42793154	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	42793154	42793154	C	T	SNP	CIC	ENST00000575354	human	ensembl	74_37	+1	known	missense	c.1046	p.S349L	0.998	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	CIC	HGNC	ENSG00000079432	tier1	-	-	35	0	0.00	17	4	19.05
CIC	0	genome.wustl.edu	37	19	42790978	42790978	+	Silent	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	42790978	42790978	C	G	SNP	CIC	ENST00000575354	human	ensembl	74_37	+1	known	silent	c.123	p.V41	0.995	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	CIC	HGNC	ENSG00000079432				52	0	0.00	44	4	8.33
CITED2	0	genome.wustl.edu	37	6	139694904	139694904	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	139694904	139694904	C	T	SNP	CITED2	ENST00000367651	human	ensembl	74_37	-1	known	missense	c.178	p.A60T	1.000	pfam_CITED	pfam_CITED	-	no_errors	CITED2	HGNC	ENSG00000164442	tier1	-	-	64	0	0.00	32	4	11.11
CLCN3	0	genome.wustl.edu	37	4	170608906	170608906	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	4	170608906	170608906	C	T	SNP	CLCN3	ENST00000347613	human	ensembl	74_37	+1	known	missense	c.416	p.S139L	1.000	superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-3	-	no_errors	CLCN3	HGNC	ENSG00000109572	tier1	rs200318516	-	115	0	0.00	130	10	7.09
CMTM3	0	genome.wustl.edu	37	16	66642288	66642289	+	Frame_Shift_Ins	INS	-	-	CC			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	16	66642288	66642289	-	CC	INS	CMTM3	ENST00000361909	human	ensembl	74_37	+1	known	frame_shift_ins	c.224_225	p.L76fs	1.000:1.000	pfam_Marvel	pfam_Marvel	-	no_errors	CMTM3	HGNC	ENSG00000140931	tier1			36	0	0.00	14	5	26.32
CNTD2	0	genome.wustl.edu	37	19	40732494	40732494	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	40732494	40732494	T	A	SNP	CNTD2	ENST00000430325	human	ensembl	74_37	-1	known	missense	c.55	p.R19W	0.000	pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CNTD2	HGNC	ENSG00000105219	tier1	-	-	11	0	0.00	3	4	57.14
CPEB4	0	genome.wustl.edu	37	5	173383260	173383260	+	RNA	SNP	A	A	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	5	173383260	173383260	A	G	SNP	CPEB4	ENST00000519467	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	CPEB4	HGNC	ENSG00000113742	tier1	-	-	52	0	0.00	27	24	47.06
CPNE5	0	genome.wustl.edu	37	6	36730753	36730753	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	36730753	36730753	C	A	SNP	CPNE5	ENST00000244751	human	ensembl	74_37	-1	known	nonsense	c.796	p.E266*	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE5	HGNC	ENSG00000124772	tier1	-	-	43	0	0.00	11	14	56.00
CPZ	0	genome.wustl.edu	37	4	8620227	8620227	+	Silent	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	4	8620227	8620227	C	G	SNP	CPZ	ENST00000360986	human	ensembl	74_37	+1	known	silent	c.1575	p.V525	0.991	superfamily_CarboxyPept-like_regulatory,smart_Peptidase_M14	pfam_Peptidase_M14,pfam_Frizzled_dom,superfamily_Frizzled_dom,superfamily_CarboxyPept-like_regulatory,smart_Frizzled_dom,smart_Peptidase_M14,prints_Peptidase_M14,pfscan_Frizzled_dom	-	no_errors	CPZ	HGNC	ENSG00000109625	tier1	-	-	35	0	0.00	14	6	30.00
CWH43	0	genome.wustl.edu	37	4	49034650	49034650	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	4	49034650	49034650	G	T	SNP	CWH43	ENST00000226432	human	ensembl	74_37	+1	known	nonsense	c.1576	p.E526*	1.000	superfamily_Endo/exonuclease/phosphatase	superfamily_Endo/exonuclease/phosphatase	-	no_errors	CWH43	HGNC	ENSG00000109182				53	0	0.00	52	3	5.45
CXCR2	0	genome.wustl.edu	37	2	218999543	218999543	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	218999543	218999543	G	T	SNP	CXCR2	ENST00000318507	human	ensembl	74_37	+1	known	nonsense	c.19	p.E7*	0.000	prints_Chemokine_CXCR2	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CXCR_1/2,prints_GPCR_Rhodpsn,prints_Chemokine_CXCR2,prints_Chemokine_rcpt,prints_Chemokine_CXCR4	-	no_errors	CXCR2	HGNC	ENSG00000180871				48	0	0.00	42	3	6.67
CYP4F12	0	genome.wustl.edu	37	19	15795913	15795913	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	15795913	15795913	C	A	SNP	CYP4F12	ENST00000324632	human	ensembl	74_37	+1	known	missense	c.1021	p.L341M	0.999	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F12	HGNC	ENSG00000186204	tier1	-	-	53	0	0.00	33	4	10.81
DACH2	0	genome.wustl.edu	37	X	85994844	85994844	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	X	85994844	85994844	C	A	SNP	DACH2	ENST00000373125	human	ensembl	74_37	+1	known	missense	c.1199	p.S400Y	1.000	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	DACH2	HGNC	ENSG00000126733	tier1	-	-	17	0	0.00	5	16	72.73
DACH2	0	genome.wustl.edu	37	X	85994845	85994845	+	Silent	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	X	85994845	85994845	C	G	SNP	DACH2	ENST00000373125	human	ensembl	74_37	+1	known	silent	c.1200	p.S400	1.000	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	DACH2	HGNC	ENSG00000126733	tier1	-	-	17	0	0.00	5	16	76.19
DACT2	0	genome.wustl.edu	37	6	168708169	168708169	+	Silent	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	168708169	168708169	C	T	SNP	DACT2	ENST00000366795	human	ensembl	74_37	-1	known	silent	c.2268	p.L756	0.997	NULL	NULL	-	no_errors	DACT2	HGNC	ENSG00000164488				51	0	0.00	29	3	9.38
DCBLD2	0	genome.wustl.edu	37	3	98518687	98518688	+	Splice_Site	DEL	TG	TG	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	98518687	98518688	TG	-	DEL	DCBLD2	ENST00000326857	human	ensembl	74_37	-1	known	splice_site_del	c.1901-3_1901-2	e16-2	1.000:0.993	-	-	-	no_errors	DCBLD2	HGNC	ENSG00000057019	tier1			17	0	0.00	19	4	17.39
DCDC2	0	genome.wustl.edu	37	6	24178761	24178761	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	24178761	24178761	C	T	SNP	DCDC2	ENST00000378454	human	ensembl	74_37	-1	known	missense	c.1123	p.E375K	0.736	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	DCDC2	HGNC	ENSG00000146038	tier1	-	-	61	0	0.00	44	24	35.29
DENND6A	0	genome.wustl.edu	37	3	57619036	57619036	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	57619036	57619036	G	A	SNP	DENND6A	ENST00000311128	human	ensembl	74_37	-1	known	nonsense	c.1309	p.R437*	1.000	pfam_Afi1_N	pfam_Afi1_N,pfam_ABL9/DENND6_dom,pfam_DENN_dom	-	no_errors	DENND6A	HGNC	ENSG00000174839	tier1	-	-	63	0	0.00	24	23	48.94
DLX6	0	genome.wustl.edu	37	7	96635388	96635388	+	Silent	SNP	A	A	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	7	96635388	96635388	A	G	SNP	DLX6	ENST00000518156	human	ensembl	74_37	+1	known	silent	c.99	p.Q33	0.996	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa	-	no_errors	DLX6	HGNC	ENSG00000006377	tier1	rs35692573	-	80	0	0.00	78	5	6.02
DMXL2	0	genome.wustl.edu	37	15	51751879	51751880	+	RNA	INS	-	-	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	15	51751879	51751880	-	A	INS	DMXL2	ENST00000558124	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	DMXL2	HGNC	ENSG00000104093	tier1			35	0	0.00	9	9	50.00
DNAH10OS	0	genome.wustl.edu	37	12	124418819	124418819	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	124418819	124418819	C	A	SNP	DNAH10OS	ENST00000514254	human	ensembl	74_37	-1	novel	missense	c.312	p.W104C	0.011	NULL	NULL	-	no_errors	DNAH10OS	HGNC	ENSG00000250091	tier1	-	-	54	0	0.00	68	4	5.56
DNAH6	0	genome.wustl.edu	37	2	84912583	84912583	+	Silent	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	84912583	84912583	G	C	SNP	DNAH6	ENST00000237449	human	ensembl	74_37	+1	known	silent	c.7050	p.L2350	1.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH6	HGNC	ENSG00000115423	tier1	-	-	44	0	0.00	35	5	12.50
DNMT1	0	genome.wustl.edu	37	19	10270336	10270336	+	Silent	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	10270336	10270336	G	A	SNP	DNMT1	ENST00000359526	human	ensembl	74_37	-1	known	silent	c.1278	p.F426	1.000	pirsf_DNA_C5-MeTrfase_1_euk,pfam_Cytosine_MeTrfase1_RFD	pirsf_DNA_C5-MeTrfase_1_euk,pfam_C5_MeTfrase,pfam_BAH_dom,pfam_Cytosine_MeTrfase1_RFD,pfam_DMAP1-bd,pfam_Znf_CXXC,smart_BAH_dom,prints_C5_MeTfrase,pfscan_BAH_dom,pfscan_Znf_CXXC	-	no_errors	DNMT1	HGNC	ENSG00000130816				47	0	0.00	41	3	6.82
DOCK10	0	genome.wustl.edu	37	2	225658132	225658133	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	225658132	225658133	-	CT	INS	DOCK10	ENST00000258390	human	ensembl	74_37	-1	known	frame_shift_ins	c.5197_5196	p.Y1732fs	1.000:0.909	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,superfamily_ARM-type_fold,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK10	HGNC	ENSG00000135905	tier1			28	0	0.00	21	6	22.22
DYSF	0	genome.wustl.edu	37	2	71753404	71753404	+	Silent	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	71753404	71753404	C	A	SNP	DYSF	ENST00000413539	human	ensembl	74_37	+1	known	silent	c.1201	p.R401	0.816	pfam_FerIin-domain,superfamily_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	DYSF	HGNC	ENSG00000135636	tier1	-	-	35	0	0.00	25	7	21.88
DYSF	0	genome.wustl.edu	37	2	71892349	71892349	+	Silent	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	71892349	71892349	C	T	SNP	DYSF	ENST00000413539	human	ensembl	74_37	+1	known	silent	c.5208	p.F1736	1.000	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	DYSF	HGNC	ENSG00000135636	tier1	-	-	28	0	0.00	20	14	41.18
EBP	0	genome.wustl.edu	37	X	48385361	48385361	+	RNA	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	X	48385361	48385361	C	G	SNP	EBP	ENST00000466461	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	EBP	HGNC	ENSG00000147155	tier1	-	-	65	0	0.00	13	38	74.51
ENOSF1	0	genome.wustl.edu	37	18	690729	690730	+	Frame_Shift_Ins	INS	-	-	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	18	690729	690730	-	T	INS	ENOSF1	ENST00000581475	human	ensembl	74_37	-1	known	frame_shift_ins	c.440_439	p.T147fs	0.009:0.019	NULL	pfam_Mandelate_racemase_N	-	no_errors	ENOSF1	HGNC	ENSG00000132199	tier1			8	0	0.00	7	5	41.67
ENSG00000225914	0	genome.wustl.edu	37	6	32231727	32231727	+	RNA	DEL	T	T	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	32231727	32231727	T	-	DEL	ENSG00000225914	ENST00000425033	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.374	-	-	-	no_errors	XXbac-BPG154L12.4	Clone_based_vega_gene	ENSG00000225914	tier1			27	0	0.00	32	4	11.11
ENSG00000244306	0	genome.wustl.edu	37	14	19856789	19856789	+	RNA	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	14	19856789	19856789	G	A	SNP	ENSG00000244306	ENST00000551334	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306	tier1	-	-	101	0	0.00	88	12	12.00
ENSG00000245156	0	genome.wustl.edu	37	11	66039143	66039143	+	RNA	DEL	A	A	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	11	66039143	66039143	A	-	DEL	ENSG00000245156	ENST00000501708	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.020	-	-	-	no_errors	RP11-867G23.3	Clone_based_vega_gene	ENSG00000245156	tier1			37	0	0.00	14	3	17.65
ERI2	0	genome.wustl.edu	37	16	20814939	20814939	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	16	20814939	20814939	C	G	SNP	ERI2	ENST00000357967	human	ensembl	74_37	-1	known	missense	c.77	p.G26A	0.000	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,pfam_Znf_GRF,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	ERI2	HGNC	ENSG00000196678	tier1	-	-	18	0	0.00	21	5	19.23
FAM131A	0	genome.wustl.edu	37	3	184062689	184062689	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	184062689	184062689	A	T	SNP	FAM131A	ENST00000383847	human	ensembl	74_37	+1	known	missense	c.1032	p.Q344H	1.000	NULL	NULL	-	no_errors	FAM131A	HGNC	ENSG00000175182	tier1	-	-	75	0	0.00	58	25	30.12
FAM189A1	0	genome.wustl.edu	37	15	29488677	29488677	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	15	29488677	29488677	T	-	DEL	FAM189A1	ENST00000261275	human	ensembl	74_37	-1	known	frame_shift_del	c.479	p.N160fs	1.000	pfam_CD20-like	pfam_CD20-like	-	no_errors	FAM189A1	HGNC	ENSG00000104059	tier1			33	0	0.00	24	2	7.69
FAM198B	0	genome.wustl.edu	37	4	159052052	159052052	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	4	159052052	159052052	G	T	SNP	FAM198B	ENST00000393807	human	ensembl	74_37	-1	known	missense	c.1262	p.A421E	0.060	NULL	NULL	-	no_errors	FAM198B	HGNC	ENSG00000164125	tier1	-	-	44	0	0.00	51	4	7.27
FARP2	0	genome.wustl.edu	37	2	242407662	242407662	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	242407662	242407662	G	C	SNP	FARP2	ENST00000264042	human	ensembl	74_37	+1	known	missense	c.2001	p.Q667H	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM_central,pfam_FERM-adjacent,superfamily_DH-domain,superfamily_FERM_central,smart_Band_41_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_FERM_domain,pfscan_Pleckstrin_homology,pfscan_DH-domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FARP2	HGNC	ENSG00000006607				51	0	0.00	43	3	6.52
FAT4	0	genome.wustl.edu	37	4	126239676	126239676	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	4	126239676	126239676	G	A	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.2110	p.G704R	0.972	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	tier1	-	-	40	0	0.00	23	14	37.84
GATA1	0	genome.wustl.edu	37	X	48650412	48650412	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	X	48650412	48650412	G	A	SNP	GATA1	ENST00000376670	human	ensembl	74_37	+1	known	missense	c.382	p.G128S	0.741	pirsf_TF_GATA-1/2/3	pfam_Znf_GATA,smart_Znf_GATA,pirsf_TF_GATA-1/2/3,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA1	HGNC	ENSG00000102145	tier1	-	-	50	0	0.00	10	24	70.59
GIT2	0	genome.wustl.edu	37	12	110383086	110383086	+	Silent	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	110383086	110383086	C	A	SNP	GIT2	ENST00000355312	human	ensembl	74_37	-1	known	silent	c.1710	p.S570	0.411	NULL	pfam_GIT1_C,pfam_GIT_SHD,pfam_ArfGAP,superfamily_Ankyrin_rpt-contain_dom,smart_ArfGAP,smart_Ankyrin_rpt,smart_GIT_SHD,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	GIT2	HGNC	ENSG00000139436	tier1	-	-	25	0	0.00	16	14	46.67
GJA1	0	genome.wustl.edu	37	6	121768356	121768356	+	Silent	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	121768356	121768356	C	T	SNP	GJA1	ENST00000282561	human	ensembl	74_37	+1	known	silent	c.363	p.V121	0.265	NULL	pfam_Connexin_N,pfam_Connexin_CCC,pfam_Connexin43_C,smart_Connexin_N,prints_Connexin,prints_Connexin43	-	no_errors	GJA1	HGNC	ENSG00000152661	tier1	-	-	62	0	0.00	47	26	35.62
GPR111	0	genome.wustl.edu	37	6	47647898	47647898	+	Frame_Shift_Del	DEL	A	A	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	47647898	47647898	A	-	DEL	GPR111	ENST00000296862	human	ensembl	74_37	+1	known	frame_shift_del	c.563	p.K189fs	0.000	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR111	HGNC	ENSG00000164393	tier1			36	0	0.00	28	2	6.67
GREB1	0	genome.wustl.edu	37	2	11696879	11696879	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	11696879	11696879	C	A	SNP	GREB1	ENST00000234142	human	ensembl	74_37	+1	known	missense	c.139	p.Q47K	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	GREB1	HGNC	ENSG00000196208	tier1	-	-	89	0	0.00	68	4	5.56
GRIK2	0	genome.wustl.edu	37	6	102376504	102376504	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	102376504	102376504	C	G	SNP	GRIK2	ENST00000421544	human	ensembl	74_37	+1	known	missense	c.2082	p.F694L	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK2	HGNC	ENSG00000164418	tier1	-	-	25	0	0.00	24	4	14.29
GTPBP2	0	genome.wustl.edu	37	6	43588627	43588627	+	RNA	SNP	T	T	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	43588627	43588627	T	C	SNP	GTPBP2	ENST00000476510	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.798	-	-	-	no_errors	GTPBP2	HGNC	ENSG00000172432	tier1	-	-	31	0	0.00	18	9	33.33
GUCY1A3	0	genome.wustl.edu	37	4	156632055	156632055	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	4	156632055	156632055	G	T	SNP	GUCY1A3	ENST00000296518	human	ensembl	74_37	+1	known	missense	c.738	p.E246D	0.973	superfamily_NO_sig/Golgi_transp_ligand-bd	pfam_A/G_cyclase,pfam_Haem_no_assoc-bd,pfam_Heme_NO-bd,superfamily_A/G_cyclase,superfamily_NO_sig/Golgi_transp_ligand-bd,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	GUCY1A3	HGNC	ENSG00000164116	tier1	-	-	30	0	0.00	22	19	46.34
GUCY1B3	0	genome.wustl.edu	37	4	156724916	156724916	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	4	156724916	156724916	G	T	SNP	GUCY1B3	ENST00000264424	human	ensembl	74_37	+1	known	missense	c.1554	p.Q518H	1.000	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_Haem_no_assoc-bd,pfam_A/G_cyclase,pfam_Heme_NO-bd,superfamily_A/G_cyclase,superfamily_NO_sig/Golgi_transp_ligand-bd,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	GUCY1B3	HGNC	ENSG00000061918	tier1	-	-	42	0	0.00	55	4	6.78
GUSBP1	0	genome.wustl.edu	37	5	21491581	21491581	+	RNA	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	5	21491581	21491581	G	A	SNP	GUSBP1	ENST00000508260	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GUSBP1	HGNC	ENSG00000183666	tier1	-	-	1098	0	0.00	984	70	6.64
HAL	0	genome.wustl.edu	37	12	96387577	96387577	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	96387577	96387577	C	G	SNP	HAL	ENST00000261208	human	ensembl	74_37	-1	known	missense	c.524	p.R175T	1.000	pfam_Aromatic_Lyase,superfamily_L-Aspartase-like,tigrfam_HutH	pfam_Aromatic_Lyase,superfamily_L-Aspartase-like,tigrfam_HutH	-	no_errors	HAL	HGNC	ENSG00000084110	tier1	-	-	33	0	0.00	43	6	12.24
HCN3	0	genome.wustl.edu	37	1	155247568	155247568	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	155247568	155247568	C	T	SNP	HCN3	ENST00000368358	human	ensembl	74_37	+1	known	missense	c.187	p.R63W	1.000	pfam_Ion_trans_N	pfam_Ion_trans_N,pfam_Ion_trans_dom,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	-	no_errors	HCN3	HGNC	ENSG00000143630	tier1	-	-	70	0	0.00	60	11	15.49
HDLBP	0	genome.wustl.edu	37	2	242207945	242207945	+	RNA	SNP	T	T	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	242207945	242207945	T	C	SNP	HDLBP	ENST00000462130	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HDLBP	HGNC	ENSG00000115677	tier1	-	-	47	0	0.00	42	13	23.64
HLF	0	genome.wustl.edu	37	17	53398174	53398174	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	17	53398174	53398174	G	C	SNP	HLF	ENST00000226067	human	ensembl	74_37	+1	known	missense	c.822	p.L274F	1.000	pfam_bZIP,smart_bZIP,pfscan_bZIP	pfam_bZIP,smart_bZIP,pfscan_bZIP	-	no_errors	HLF	HGNC	ENSG00000108924				48	0	0.00	46	3	6.12
HMCN1	0	genome.wustl.edu	37	1	185985332	185985332	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	185985332	185985332	G	T	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.5152	p.A1718S	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	59	0	0.00	76	4	5.00
HRASLS	0	genome.wustl.edu	37	3	192980950	192980950	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	192980950	192980950	G	C	SNP	HRASLS	ENST00000264735	human	ensembl	74_37	+1	known	missense	c.646	p.A216P	0.754	pfam_LRAT-like_dom	pfam_LRAT-like_dom	-	no_errors	HRASLS	HGNC	ENSG00000127252	tier1	-	-	67	0	0.00	68	20	22.73
ICT1	0	genome.wustl.edu	37	17	73008936	73008936	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	17	73008936	73008936	C	G	SNP	ICT1	ENST00000301585	human	ensembl	74_37	+1	known	missense	c.155	p.S52C	0.103	NULL	pfam_Pep_chain_release_fac_I_II	-	no_errors	ICT1	HGNC	ENSG00000167862	tier1	-	-	24	0	0.00	7	7	50.00
IGSF6	0	genome.wustl.edu	37	16	21658708	21658708	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	16	21658708	21658708	C	A	SNP	IGSF6	ENST00000268389	human	ensembl	74_37	-1	known	missense	c.173	p.C58F	0.990	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF6	HGNC	ENSG00000140749	tier1	-	-	78	0	0.00	44	27	38.03
IL17RA	0	genome.wustl.edu	37	22	17578725	17578725	+	Silent	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	22	17578725	17578725	C	T	SNP	IL17RA	ENST00000319363	human	ensembl	74_37	+1	known	silent	c.202	p.L68	0.393	NULL	pfam_SEFIR	-	no_errors	IL17RA	HGNC	ENSG00000177663	tier1	-	-	61	0	0.00	32	18	36.00
IRX5	0	genome.wustl.edu	37	16	54966749	54966749	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	16	54966749	54966749	G	C	SNP	IRX5	ENST00000394636	human	ensembl	74_37	+1	known	missense	c.589	p.E197Q	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX5	HGNC	ENSG00000176842	tier1	-	-	80	0	0.00	41	16	28.07
JPH4	0	genome.wustl.edu	37	14	24041033	24041033	+	Silent	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	14	24041033	24041033	C	T	SNP	JPH4	ENST00000356300	human	ensembl	74_37	-1	known	silent	c.1248	p.L416	1.000	pirsf_Junctophilin	pfam_MORN,smart_MORN,pirsf_Junctophilin	-	no_errors	JPH4	HGNC	ENSG00000092051	tier1	-	-	57	0	0.00	31	4	11.43
KIAA0196	0	genome.wustl.edu	37	8	126062872	126062872	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	8	126062872	126062872	C	G	SNP	KIAA0196	ENST00000318410	human	ensembl	74_37	-1	known	missense	c.2133	p.R711S	1.000	pfam_WASH_strumpellin	pfam_WASH_strumpellin,superfamily_Ig_E-set	-	no_errors	KIAA0196	HGNC	ENSG00000164961	tier1	-	-	32	0	0.00	30	4	11.76
KIAA1024L	0	genome.wustl.edu	37	5	129100730	129100730	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	5	129100730	129100730	G	T	SNP	KIAA1024L	ENST00000564719	human	ensembl	74_37	+1	known	missense	c.547	p.V183L	1.000	pfam_UPF0258	pfam_UPF0258	-	no_errors	KIAA1024L	HGNC	ENSG00000186367	tier1	-	-	53	0	0.00	37	4	9.76
KIAA1244	0	genome.wustl.edu	37	6	138607140	138607140	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	138607140	138607140	C	G	SNP	KIAA1244	ENST00000251691	human	ensembl	74_37	+1	known	missense	c.2519	p.T840R	0.031	superfamily_ARM-type_fold	pfam_DUF1981_Sec7_assoc,superfamily_ARM-type_fold,superfamily_Sec7_dom,smart_Sec7_dom	-	no_errors	KIAA1244	HGNC	ENSG00000112379	tier1	-	-	43	0	0.00	39	17	30.36
KLHL29	0	genome.wustl.edu	37	2	23926091	23926091	+	Frame_Shift_Del	DEL	C	C	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	23926091	23926091	C	-	DEL	KLHL29	ENST00000486442	human	ensembl	74_37	+1	known	frame_shift_del	c.2141	p.P715fs	1.000	pfam_Kelch_1,pfam_Kelch_2,smart_Kelch_1	pfam_Kelch_1,pfam_BACK,pfam_Kelch_2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KLHL29	HGNC	ENSG00000119771	tier1			63	0	0.00	29	2	6.45
KLRF1	0	genome.wustl.edu	37	12	9994450	9994450	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	9994450	9994450	G	A	SNP	KLRF1	ENST00000279544	human	ensembl	74_37	+1	known	missense	c.377	p.C126Y	0.999	superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	KLRF1	HGNC	ENSG00000150045				36	0	0.00	104	6	5.45
KRI1	0	genome.wustl.edu	37	19	10666007	10666008	+	Frame_Shift_Ins	INS	-	-	AA			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	10666007	10666008	-	AA	INS	KRI1	ENST00000312962	human	ensembl	74_37	-1	known	frame_shift_ins	c.1654_1653	p.K551fs	1.000:1.000	pfam_KRR1-interact_protein_1	pfam_KRR1-interact_protein_1	-	no_errors	KRI1	HGNC	ENSG00000129347	tier1			79	0	0.00	40	24	37.50
LAMA2	0	genome.wustl.edu	37	6	129636761	129636761	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	129636761	129636761	T	-	DEL	LAMA2	ENST00000421865	human	ensembl	74_37	+1	known	frame_shift_del	c.3696	p.Y1234fs	0.997	pfam_Laminin_B_type_IV,smart_Laminin_B_subgr,pfscan_Laminin_B_type_IV	pfam_Laminin_G,pfam_EGF_laminin,pfam_Laminin_N,pfam_Laminin_I,pfam_Laminin_B_type_IV,pfam_Laminin_II,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,superfamily_t-SNARE,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	LAMA2	HGNC	ENSG00000196569	tier1			39	0	0.00	33	2	5.71
LCT	0	genome.wustl.edu	37	2	136570212	136570212	+	Silent	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	136570212	136570212	C	G	SNP	LCT	ENST00000264162	human	ensembl	74_37	-1	known	silent	c.2022	p.L674	0.126	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850	tier1	-	-	76	0	0.00	51	8	13.56
LENG9	0	genome.wustl.edu	37	19	54973717	54973717	+	Silent	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	54973717	54973717	G	A	SNP	LENG9	ENST00000333834	human	ensembl	74_37	-1	known	silent	c.1059	p.N353	0.000	superfamily_RNA_ligase/cNuc_Pdiesterase	superfamily_RNA_ligase/cNuc_Pdiesterase,smart_Znf_CCCH	-	no_errors	LENG9	HGNC	ENSG00000182909	tier1	-	-	78	0	0.00	54	17	23.94
LIMCH1	0	genome.wustl.edu	37	4	41648815	41648815	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	4	41648815	41648815	C	G	SNP	LIMCH1	ENST00000503057	human	ensembl	74_37	+1	known	missense	c.2725	p.P909A	1.000	NULL	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LIMCH1	HGNC	ENSG00000064042	tier1	-	-	36	0	0.00	35	4	10.26
LMAN1	0	genome.wustl.edu	37	18	57006155	57006155	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	18	57006155	57006155	C	A	SNP	LMAN1	ENST00000251047	human	ensembl	74_37	-1	known	missense	c.986	p.R329L	1.000	superfamily_HMG_box_dom	pfam_Lectin_leg,superfamily_ConA-like_lec_gl_sf,superfamily_HMG_box_dom	-	no_errors	LMAN1	HGNC	ENSG00000074695				36	0	0.00	29	2	6.45
LOC100130950	0	genome.wustl.edu	37	17	5126838	5126839	+	RNA	INS	-	-	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	17	5126838	5126839	-	T	INS	LOC100130950	ENST00000575601	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-333E1.1	Clone_based_vega_gene	ENSG00000261879	tier1			25	0	0.00	29	3	9.38
LOC100293748	0	genome.wustl.edu	37	1	149263943	149263944	+	RNA	INS	-	-	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	149263943	149263944	0	T	INS	LOC100293748	ENST00000325963	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.989:0.991	-	-	-	no_errors	RP11-403I13.4	Clone_based_vega_gene	ENSG00000223779				8	0	0.00	5	6	54.55
LRRC43	0	genome.wustl.edu	37	12	122676103	122676103	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	122676103	122676103	G	T	SNP	LRRC43	ENST00000339777	human	ensembl	74_37	+1	known	missense	c.1078	p.V360F	0.003	NULL	NULL	-	no_errors	LRRC43	HGNC	ENSG00000158113				33	0	0.00	36	2	5.26
LRRIQ3	0	genome.wustl.edu	37	1	74575212	74575213	+	Frame_Shift_Ins	INS	-	-	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	74575212	74575213	-	T	INS	LRRIQ3	ENST00000354431	human	ensembl	74_37	-1	known	frame_shift_ins	c.733_732	p.Q244fs	0.001:0.004	pfscan_IQ_motif_EF-hand-BS	pfscan_IQ_motif_EF-hand-BS	-	no_errors	LRRIQ3	HGNC	ENSG00000162620	tier1			30	0	0.00	36	3	7.69
LURAP1L	0	genome.wustl.edu	37	9	12775744	12775744	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	9	12775744	12775744	A	T	SNP	LURAP1L	ENST00000319264	human	ensembl	74_37	+1	known	missense	c.30	p.R10S	1.000	NULL	NULL	-	no_errors	LURAP1L	HGNC	ENSG00000153714	tier1	-	-	81	0	0.00	21	31	59.62
LYPD3	0	genome.wustl.edu	37	19	43969651	43969651	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	43969651	43969651	G	C	SNP	LYPD3	ENST00000244333	human	ensembl	74_37	-1	known	missense	c.73	p.R25G	0.000	NULL	pfam_LY6_UPAR,smart_LY6_UPA_recep-like	-	no_errors	LYPD3	HGNC	ENSG00000124466	tier1	-	-	104	0	0.00	70	13	15.66
LZTS1	0	genome.wustl.edu	37	8	20110621	20110621	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	8	20110621	20110621	T	-	DEL	LZTS1	ENST00000265801	human	ensembl	74_37	-1	known	frame_shift_del	c.821	p.E274fs	0.973	NULL	NULL	-	no_errors	LZTS1	HGNC	ENSG00000061337	tier1			56	0	0.00	15	2	11.76
MED12L	0	genome.wustl.edu	37	3	151107839	151107839	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	151107839	151107839	C	A	SNP	MED12L	ENST00000474524	human	ensembl	74_37	+1	known	missense	c.5419	p.P1807T	0.866	NULL	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12,pfam_Mediator_Med12_catenin-bd	-	no_errors	MED12L	HGNC	ENSG00000144893	tier1	-	-	57	0	0.00	54	4	6.90
MEGF8	0	genome.wustl.edu	37	19	42861130	42861130	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	42861130	42861130	G	C	SNP	MEGF8	ENST00000251268	human	ensembl	74_37	+1	known	missense	c.4827	p.E1609D	1.000	superfamily_Gal_Oxase/kelch_b-propeller	pfam_CUB_dom,pfam_EGF_laminin,pfam_Plexin_repeat,superfamily_Gal_Oxase/kelch_b-propeller,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_CUB_dom,smart_EG-like_dom,smart_Plexin-like_fold,smart_EGF-like_Ca-bd_dom,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin	-	no_errors	MEGF8	HGNC	ENSG00000105429				32	0	0.00	20	3	13.04
MFSD4	0	genome.wustl.edu	37	1	205554106	205554106	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	205554106	205554106	C	T	SNP	MFSD4	ENST00000367147	human	ensembl	74_37	+1	known	missense	c.962	p.T321M	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD4	HGNC	ENSG00000174514	tier1	-	-	79	0	0.00	89	5	5.32
MNAT1	0	genome.wustl.edu	37	14	61275047	61275047	+	Silent	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	14	61275047	61275047	C	T	SNP	MNAT1	ENST00000261245	human	ensembl	74_37	+1	known	silent	c.321	p.F107	1.000	pirsf_MAT1/Tfb3,pfam_Cdk-activating_kinase_MAT1_cen,tigrfam_MAT1/Tfb3	pirsf_MAT1/Tfb3,pfam_Cdk-activating_kinase_MAT1_cen,smart_Znf_RING,pfscan_Ubiquitin-int_motif,pfscan_Znf_RING,tigrfam_MAT1/Tfb3	-	no_errors	MNAT1	HGNC	ENSG00000020426				61	0	0.00	37	5	11.63
MOGAT1	0	genome.wustl.edu	37	2	223554125	223554125	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	223554125	223554125	T	C	SNP	MOGAT1	ENST00000446656	human	ensembl	74_37	+1	known	missense	c.415	p.Y139H	0.991	pfam_DAGAT	pfam_DAGAT	-	no_errors	MOGAT1	HGNC	ENSG00000124003				24	0	0.00	34	5	12.82
MOSPD1	0	genome.wustl.edu	37	X	134033227	134033227	+	RNA	DEL	T	T	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	X	134033227	134033227	T	-	DEL	MOSPD1	ENST00000462060	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MOSPD1	HGNC	ENSG00000101928	tier1			30	0	0.00	27	2	6.90
MT-CO1	0	genome.wustl.edu	37	MT	6093	6093	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	MT	6093	6093	G	A	SNP	MT-CO1	ENST00000361624	human	ensembl	74_37	+1	known	missense	c.190	p.V64M	NULL	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom,prints_Cyt_c_Oxase_su1	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom,prints_Cyt_c_Oxase_su1	-	no_errors	MT-CO1	HGNC	ENSG00000198804	tier1	-	-	15	0	0.00	7	8	53.33
MYH2	0	genome.wustl.edu	37	17	10451186	10451186	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	17	10451186	10451186	G	A	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	nonsense	c.52	p.R18*	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414	tier1	-	-	33	0	0.00	27	8	22.86
MYOM3	0	genome.wustl.edu	37	1	24408891	24408891	+	RNA	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	24408891	24408891	C	T	SNP	MYOM3	ENST00000475306	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MYOM3	HGNC	ENSG00000142661	tier1	-	-	10	0	0.00	11	8	42.11
NAV3	0	genome.wustl.edu	37	12	78400821	78400821	+	Silent	SNP	A	A	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	78400821	78400821	A	G	SNP	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	silent	c.1503	p.K501	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798	tier1	-	-	15	0	0.00	20	11	35.48
NCAM1	0	genome.wustl.edu	37	11	113147541	113147541	+	RNA	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	11	113147541	113147541	C	T	SNP	NCAM1	ENST00000397957	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NCAM1	HGNC	ENSG00000149294	tier1	-	-	28	0	0.00	1	3	75.00
NDST1	0	genome.wustl.edu	37	5	149901145	149901145	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	5	149901145	149901145	A	G	SNP	NDST1	ENST00000261797	human	ensembl	74_37	+1	known	missense	c.329	p.K110R	1.000	pfam_Heparan_SO4_deacetylase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST1	HGNC	ENSG00000070614	tier1	-	-	77	0	0.00	18	22	55.00
NLRP7	0	genome.wustl.edu	37	19	55452840	55452840	+	Silent	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	55452840	55452840	G	C	SNP	NLRP7	ENST00000446217	human	ensembl	74_37	-1	known	silent	c.324	p.L108	0.000	pfam_DAPIN,superfamily_DEATH-like_dom,pfscan_DAPIN	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP7	HGNC	ENSG00000167634				56	0	0.00	45	3	6.25
NOX3	0	genome.wustl.edu	37	6	155764431	155764431	+	Silent	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	155764431	155764431	G	A	SNP	NOX3	ENST00000159060	human	ensembl	74_37	-1	known	silent	c.462	p.L154	1.000	pfam_Fe3_Rdtase_TM_dom	pfam_Fe_red_NAD-bd_6,pfam_FAD-bd_8,pfam_Fe3_Rdtase_TM_dom,pfam_OxRdtase_FAD-bd_dom,superfamily_Riboflavin_synthase-like_b-brl,prints_Cyt_b245_heavy_chain	-	no_errors	NOX3	HGNC	ENSG00000074771				43	0	0.00	34	3	8.11
OR14J1	0	genome.wustl.edu	37	6	29274876	29274876	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	29274876	29274876	G	A	SNP	OR14J1	ENST00000377160	human	ensembl	74_37	+1	known	missense	c.410	p.R137H	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR14J1	HGNC	ENSG00000204695	tier1	-	-	50	0	0.00	47	29	37.66
OR2C1	0	genome.wustl.edu	37	16	3406771	3406771	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	16	3406771	3406771	C	G	SNP	OR2C1	ENST00000304936	human	ensembl	74_37	+1	known	missense	c.831	p.F277L	0.990	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2C1	HGNC	ENSG00000168158	tier1	-	-	21	0	0.00	12	6	33.33
OR2W5	0	genome.wustl.edu	37	1	247655131	247655131	+	RNA	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	247655131	247655131	G	T	SNP	OR2W5	ENST00000522351	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	OR2W5	HGNC	ENSG00000203664	tier1	-	-	77	0	0.00	59	23	28.05
OR5H15	0	genome.wustl.edu	37	3	97888442	97888442	+	Nonsense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	97888442	97888442	C	G	SNP	OR5H15	ENST00000356526	human	ensembl	74_37	+1	known	nonsense	c.899	p.S300*	0.001	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5H15	HGNC	ENSG00000233412	tier1	-	-	38	0	0.00	38	6	13.64
PALM2	0	genome.wustl.edu	37	9	112705193	112705193	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	9	112705193	112705193	C	A	SNP	PALM2	ENST00000448454	human	ensembl	74_37	+1	known	missense	c.730	p.Q244K	1.000	pfam_Paralemmin	pfam_Paralemmin	-	no_errors	PALM2	HGNC	ENSG00000243444	tier1	-	-	22	0	0.00	14	8	36.36
PARD6B	0	genome.wustl.edu	37	20	49366851	49366851	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	20	49366851	49366851	G	C	SNP	PARD6B	ENST00000371610	human	ensembl	74_37	+1	known	missense	c.945	p.E315D	0.948	NULL	pfam_OPR_PB1,pfam_PDZ,superfamily_PDZ,smart_OPR_PB1,smart_PDZ,pfscan_PDZ	-	no_errors	PARD6B	HGNC	ENSG00000124171	tier1	-	-	49	0	0.00	20	11	35.48
PARD6B	0	genome.wustl.edu	37	20	49367006	49367006	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	20	49367006	49367006	G	A	SNP	PARD6B	ENST00000371610	human	ensembl	74_37	+1	known	missense	c.1100	p.G367E	1.000	NULL	pfam_OPR_PB1,pfam_PDZ,superfamily_PDZ,smart_OPR_PB1,smart_PDZ,pfscan_PDZ	-	no_errors	PARD6B	HGNC	ENSG00000124171				17	0	0.00	7	6	46.15
PARP4	0	genome.wustl.edu	37	13	25073461	25073461	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	13	25073461	25073461	G	T	SNP	PARP4	ENST00000381989	human	ensembl	74_37	-1	known	missense	c.455	p.A152E	1.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_VIT,pfam_VWF_A,pfam_BRCT_dom,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_BRCT_dom,smart_BRCT_dom,smart_VIT,smart_VWF_A,pfscan_BRCT_dom,pfscan_VWF_A,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP4	HGNC	ENSG00000102699				30	0	0.00	32	4	11.11
PCDH15	0	genome.wustl.edu	37	10	56424015	56424015	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	10	56424015	56424015	C	T	SNP	PCDH15	ENST00000320301	human	ensembl	74_37	-1	known	missense	c.8	p.R3Q	0.978	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH15	HGNC	ENSG00000150275	tier1	-	-	36	0	0.00	7	14	66.67
PCDP1	0	genome.wustl.edu	37	2	120395988	120395988	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	120395988	120395988	C	T	SNP	PCDP1	ENST00000413369	human	ensembl	74_37	+1	known	missense	c.2128	p.H710Y	1.000	NULL	NULL	-	no_errors	PCDP1	Uniprot_gn	ENSG00000163075				54	0	0.00	37	3	7.50
PKD2	0	genome.wustl.edu	37	4	88989068	88989068	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	4	88989068	88989068	C	G	SNP	PKD2	ENST00000237596	human	ensembl	74_37	+1	known	missense	c.2377	p.H793D	1.000	NULL	pfam_PKD1_2_channel,pfam_Ion_trans_dom,pfscan_EF_hand_dom,prints_PKD_2,prints_PKD_1	-	no_errors	PKD2	HGNC	ENSG00000118762	tier1	-	-	48	0	0.00	34	4	10.53
PKHD1	0	genome.wustl.edu	37	6	51893109	51893109	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	51893109	51893109	G	C	SNP	PKHD1	ENST00000371117	human	ensembl	74_37	-1	known	missense	c.3405	p.N1135K	0.003	superfamily_Ig_E-set,smart_IPT	pfam_IPT,pfam_G8_domain,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,smart_IPT,smart_PbH1	-	no_errors	PKHD1	HGNC	ENSG00000170927				43	0	0.00	38	4	9.52
PLCH1	0	genome.wustl.edu	37	3	155267678	155267678	+	Silent	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	155267678	155267678	C	T	SNP	PLCH1	ENST00000340059	human	ensembl	74_37	-1	known	silent	c.1224	p.L408	0.998	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCH1	HGNC	ENSG00000114805				52	0	0.00	49	3	5.77
PLXDC2	0	genome.wustl.edu	37	10	20568836	20568836	+	RNA	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	10	20568836	20568836	C	T	SNP	PLXDC2	ENST00000377238	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.220	-	-	-	no_errors	PLXDC2	HGNC	ENSG00000120594	tier1	-	-	14	0	0.00	9	5	35.71
POLR3A	0	genome.wustl.edu	37	10	79739971	79739971	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	10	79739971	79739971	G	T	SNP	POLR3A	ENST00000372371	human	ensembl	74_37	-1	known	missense	c.3952	p.L1318M	1.000	NULL	pfam_RNA_pol_Rpb1_1,pfam_RNA_pol_Rpb1_5,pfam_RNA_pol_asu,pfam_RNA_pol_Rpb1_3,pfam_RNA_pol_Rpb1_4,smart_RNA_pol_N	-	no_errors	POLR3A	HGNC	ENSG00000148606	tier1	-	-	40	0	0.00	17	3	15.00
POU5F2	0	genome.wustl.edu	37	5	93076323	93076323	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	5	93076323	93076323	G	A	SNP	POU5F2	ENST00000510627	human	ensembl	74_37	-1	known	missense	c.947	p.S316F	0.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU5F2	HGNC	ENSG00000248483	tier1	-	-	27	0	0.00	18	3	14.29
POU6F2	0	genome.wustl.edu	37	7	39379288	39379290	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	7	39379288	39379290	CAG	-	DEL	POU6F2	ENST00000403058	human	ensembl	74_37	+1	known	in_frame_del	c.559_561	p.Q190in_frame_del	0.172:0.153:0.157	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU6F2	HGNC	ENSG00000106536	tier1			57	0	0.00	31	4	11.43
PRSS3	0	genome.wustl.edu	37	9	33797844	33797844	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	9	33797844	33797844	T	A	SNP	PRSS3	ENST00000361005	human	ensembl	74_37	+1	known	missense	c.389	p.L130Q	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS3	HGNC	ENSG00000010438	tier1	-	-	88	0	0.00	38	7	15.56
PTMA	0	genome.wustl.edu	37	2	232577559	232577559	+	Nonstop_Mutation	SNP	T	T	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	232577559	232577559	T	C	SNP	PTMA	ENST00000341369	human	ensembl	74_37	+1	known	nonstop	c.334	p.*112Q	1.000	NULL	pfam_Pro/parathymosin	-	no_errors	PTMA	HGNC	ENSG00000187514				22	0	0.00	23	3	11.54
RAB8B	0	genome.wustl.edu	37	15	63548779	63548779	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	15	63548779	63548779	G	C	SNP	RAB8B	ENST00000321437	human	ensembl	74_37	+1	known	missense	c.400	p.E134Q	1.000	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,pfam_SRP_receptor_beta_su,superfamily_P-loop_NTPase,smart_Small_GTPase_ARF,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB8B	HGNC	ENSG00000166128				42	0	0.00	27	3	10.00
RBMS2	0	genome.wustl.edu	37	12	56965518	56965518	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	56965518	56965518	A	G	SNP	RBMS2	ENST00000262031	human	ensembl	74_37	+1	known	missense	c.421	p.N141D	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMS2	HGNC	ENSG00000076067	tier1	-	-	31	0	0.00	17	28	62.22
REPS1	0	genome.wustl.edu	37	6	139238693	139238693	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	139238693	139238693	T	C	SNP	REPS1	ENST00000450536	human	ensembl	74_37	-1	known	missense	c.1600	p.R534G	1.000	NULL	smart_EPS15_homology,pfscan_EF_hand_dom,pfscan_EPS15_homology	-	no_errors	REPS1	HGNC	ENSG00000135597	tier1	-	-	56	0	0.00	39	29	42.65
RIPPLY1	0	genome.wustl.edu	37	X	106145440	106145440	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	X	106145440	106145440	G	T	SNP	RIPPLY1	ENST00000276173	human	ensembl	74_37	-1	known	missense	c.161	p.T54N	0.016	NULL	NULL	-	no_errors	RIPPLY1	HGNC	ENSG00000147223				16	0	0.00	20	4	16.67
RNF139	0	genome.wustl.edu	37	8	125498688	125498688	+	Silent	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	8	125498688	125498688	C	T	SNP	RNF139	ENST00000303545	human	ensembl	74_37	+1	known	silent	c.798	p.F266	0.988	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF139	HGNC	ENSG00000170881	tier1	-	-	18	0	0.00	14	9	39.13
RNF25	0	genome.wustl.edu	37	2	219529070	219529070	+	Silent	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	219529070	219529070	G	A	SNP	RNF25	ENST00000295704	human	ensembl	74_37	-1	known	silent	c.990	p.G330	0.874	NULL	pfam_RWD-domain,superfamily_UBQ-conjugating_enzyme/RWD,smart_RWD-domain,smart_Znf_RING,pfscan_RWD-domain,pfscan_Znf_RING	-	no_errors	RNF25	HGNC	ENSG00000163481	tier1	-	-	89	0	0.00	50	28	35.90
RP1L1	0	genome.wustl.edu	37	8	10466069	10466069	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	8	10466069	10466069	C	G	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	missense	c.5539	p.E1847Q	0.001	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638	tier1	-	-	91	0	0.00	47	18	27.69
RP1L1	0	genome.wustl.edu	37	8	10466966	10466966	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	8	10466966	10466966	G	T	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	missense	c.4642	p.Q1548K	0.005	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638	tier1	-	-	48	0	0.00	43	13	23.21
RPAP2	0	genome.wustl.edu	37	1	92846387	92846387	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	92846387	92846387	G	T	SNP	RPAP2	ENST00000610020	human	ensembl	74_37	+1	known	nonsense	c.1795	p.E599*	1.000	NULL	pfam_DUF408	-	no_errors	RPAP2	HGNC	ENSG00000122484	tier1	-	-	56	0	0.00	31	26	45.61
RPGRIP1L	0	genome.wustl.edu	37	16	53675262	53675262	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	16	53675262	53675262	G	T	SNP	RPGRIP1L	ENST00000379925	human	ensembl	74_37	-1	known	missense	c.2809	p.R937S	0.000	NULL	pfam_DUF3250,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RPGRIP1L	HGNC	ENSG00000103494				27	0	0.00	27	2	6.90
RPL13P5	0	genome.wustl.edu	37	12	6993412	6993412	+	RNA	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	6993412	6993412	G	C	SNP	RPL13P5	ENST00000412023	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPL13P5	HGNC	ENSG00000240370	tier1	-	-	62	0	0.00	86	6	6.52
RPP21	0	genome.wustl.edu	37	6	30312963	30312963	+	Silent	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	30312963	30312963	G	A	SNP	RPP21	ENST00000428040	human	ensembl	74_37	+1	known	silent	c.15	p.V5	0.999	NULL	pfam_Rpr2	-	no_errors	RPP21	HGNC	ENSG00000241370	tier1	-	-	64	0	0.00	29	11	27.50
RTP4	0	genome.wustl.edu	37	3	187086357	187086357	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	187086357	187086357	A	T	SNP	RTP4	ENST00000259030	human	ensembl	74_37	+1	known	missense	c.128	p.K43M	0.978	NULL	NULL	-	no_errors	RTP4	HGNC	ENSG00000136514	tier1	-	-	16	0	0.00	13	7	35.00
SEC24C	0	genome.wustl.edu	37	10	75526572	75526572	+	Silent	SNP	A	A	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	10	75526572	75526572	A	T	SNP	SEC24C	ENST00000339365	human	ensembl	74_37	+1	known	silent	c.1854	p.V618	1.000	pfam_Sec23/24_trunk_dom	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24C	HGNC	ENSG00000176986	tier1	-	-	47	0	0.00	40	18	31.03
SEPT5	0	genome.wustl.edu	37	22	19708187	19708187	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	22	19708187	19708187	C	T	SNP	SEPT5	ENST00000383045	human	ensembl	74_37	+1	known	missense	c.640	p.R214W	0.998	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,pfam_Ribosome_biogen_GTPase_RsgA,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT5	HGNC	ENSG00000184702				55	0	0.00	47	3	6.00
SH2D3C	0	genome.wustl.edu	37	9	130506980	130506980	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	9	130506980	130506980	G	A	SNP	SH2D3C	ENST00000314830	human	ensembl	74_37	-1	known	missense	c.1663	p.P555S	1.000	NULL	pfam_SH2,pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_SH2,smart_RasGRF_CDC25,pfscan_SH2,pfscan_RasGRF_CDC25	-	no_errors	SH2D3C	HGNC	ENSG00000095370	tier1	-	-	44	0	0.00	24	16	40.00
SLC15A1	0	genome.wustl.edu	37	13	99358508	99358508	+	Splice_Site	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	13	99358508	99358508	C	G	SNP	SLC15A1	ENST00000376503	human	ensembl	74_37	-1	known	splice_site	c.1150-1	e16-1	1.000	-	-	-	no_errors	SLC15A1	HGNC	ENSG00000088386				43	0	0.00	41	3	6.82
SLC25A15	0	genome.wustl.edu	37	13	41379274	41379274	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	13	41379274	41379274	C	G	SNP	SLC25A15	ENST00000338625	human	ensembl	74_37	+1	known	missense	c.335	p.A112G	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A15	HGNC	ENSG00000102743	tier1	-	-	75	0	0.00	39	14	26.42
SLC25A6	0	genome.wustl.edu	37	X	1506281	1506281	+	Silent	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	X	1506281	1506281	G	A	SNP	SLC25A6	ENST00000381401	human	ensembl	74_37	-1	known	silent	c.630	p.I210	0.965	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier,prints_Aden_trnslctor,prints_Mit_uncoupling	-	no_errors	SLC25A6	HGNC	ENSG00000169100	tier1	-	-	58	0	0.00	52	21	28.77
SLC33A1	0	genome.wustl.edu	37	3	155547652	155547652	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	155547652	155547652	T	C	SNP	SLC33A1	ENST00000359479	human	ensembl	74_37	-1	known	missense	c.1307	p.N436S	1.000	superfamily_MFS_dom_general_subst_transpt,tigrfam_AmpG_permease/AT-1	superfamily_MFS_dom_general_subst_transpt,tigrfam_AmpG_permease/AT-1	-	no_errors	SLC33A1	HGNC	ENSG00000169359	tier1	-	-	63	0	0.00	69	23	25.00
SLCO1A2	0	genome.wustl.edu	37	12	21448561	21448561	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	21448561	21448561	G	A	SNP	SLCO1A2	ENST00000307378	human	ensembl	74_37	-1	known	missense	c.1241	p.S414L	0.807	pfam_OA_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	pfam_OA_transporter,pfam_MFS,pfam_Kazal_dom,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_OA_transporter	-	no_errors	SLCO1A2	HGNC	ENSG00000084453	tier1	-	-	40	0	0.00	54	9	14.29
SNORD58A	0	genome.wustl.edu	37	18	47017676	47017676	+	RNA	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	18	47017676	47017676	C	T	SNP	SNORD58A	ENST00000383875	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNORD58A	HGNC	ENSG00000206602	tier1	-	-	50	0	0.00	45	5	10.00
SNTG1	0	genome.wustl.edu	37	8	51569521	51569521	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	8	51569521	51569521	G	T	SNP	SNTG1	ENST00000518864	human	ensembl	74_37	+1	known	missense	c.902	p.R301I	0.009	smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,pfscan_PDZ,pfscan_Pleckstrin_homology	-	no_errors	SNTG1	HGNC	ENSG00000147481	tier1	-	-	36	0	0.00	19	9	32.14
SPATA3	0	genome.wustl.edu	37	2	231860992	231860992	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	231860992	231860992	G	A	SNP	SPATA3	ENST00000424440	human	ensembl	74_37	+1	known	missense	c.44	p.R15Q	0.002	NULL	NULL	-	no_errors	SPATA3	HGNC	ENSG00000173699	tier1	-	-	61	0	0.00	41	23	35.38
STAG1	0	genome.wustl.edu	37	3	136141639	136141639	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	136141639	136141639	C	G	SNP	STAG1	ENST00000383202	human	ensembl	74_37	-1	known	missense	c.1804	p.E602Q	1.000	superfamily_ARM-type_fold	pfam_STAG,superfamily_ARM-type_fold	-	no_errors	STAG1	HGNC	ENSG00000118007	tier1	-	-	41	0	0.00	44	14	24.14
STARD13	0	genome.wustl.edu	37	13	33760148	33760148	+	Silent	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	13	33760148	33760148	G	T	SNP	STARD13	ENST00000255486	human	ensembl	74_37	-1	known	silent	c.12	p.P4	0.000	NULL	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	STARD13	HGNC	ENSG00000133121	tier1	-	-	28	0	0.00	16	14	46.67
STARD3	0	genome.wustl.edu	37	17	37814733	37814733	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	17	37814733	37814733	C	T	SNP	STARD3	ENST00000336308	human	ensembl	74_37	+1	known	missense	c.505	p.L169F	1.000	pfam_MENTAL	pfam_MENTAL,pfam_START_lipid-bd_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,prints_StAR	-	no_errors	STARD3	HGNC	ENSG00000131748	tier1	-	-	68	0	0.00	30	42	58.33
STPG2	0	genome.wustl.edu	37	4	99049692	99049692	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	4	99049692	99049692	G	A	SNP	STPG2	ENST00000295268	human	ensembl	74_37	-1	known	missense	c.274	p.P92S	1.000	NULL	NULL	-	no_errors	STPG2	HGNC	ENSG00000163116				40	0	0.00	43	5	10.20
SWAP70	0	genome.wustl.edu	37	11	9749710	9749710	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	11	9749710	9749710	A	T	SNP	SWAP70	ENST00000318950	human	ensembl	74_37	+1	known	missense	c.753	p.K251N	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_EF_hand_dom,pfscan_Pleckstrin_homology	-	no_errors	SWAP70	HGNC	ENSG00000133789	tier1	-	-	18	0	0.00	26	8	23.53
TAGAP	0	genome.wustl.edu	37	6	159461856	159461856	+	Silent	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	159461856	159461856	G	T	SNP	TAGAP	ENST00000367066	human	ensembl	74_37	-1	known	silent	c.486	p.L162	1.000	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	TAGAP	HGNC	ENSG00000164691	tier1	-	-	70	0	0.00	58	4	6.45
TANGO6	0	genome.wustl.edu	37	16	68901087	68901087	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	16	68901087	68901087	C	G	SNP	TANGO6	ENST00000261778	human	ensembl	74_37	+1	known	missense	c.958	p.Q320E	1.000	NULL	pfam_DUF2435,pfam_DUF2411,superfamily_ARM-type_fold	-	no_errors	TANGO6	HGNC	ENSG00000103047				59	0	0.00	48	4	7.69
TARS	0	genome.wustl.edu	37	5	33457431	33457431	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	5	33457431	33457431	C	A	SNP	TARS	ENST00000265112	human	ensembl	74_37	+1	known	missense	c.907	p.P303T	1.000	superfamily_Thr/Ala-tRNA-synth_IIc_edit,tigrfam_Thr-tRNA-ligase_IIa	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_TGS,pfam_tRNA_SAD,superfamily_Thr/Ala-tRNA-synth_IIc_edit,superfamily_Anticodon-bd,superfamily_TGS-like,smart_tRNA_SAD,prints_Thr-tRNA-ligase_IIa,pfscan_aa-tRNA-synth_II,tigrfam_Thr-tRNA-ligase_IIa	-	no_errors	TARS	HGNC	ENSG00000113407	tier1	-	-	57	0	0.00	14	18	56.25
TBC1D15	0	genome.wustl.edu	37	12	72312261	72312261	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	72312261	72312261	G	T	SNP	TBC1D15	ENST00000550746	human	ensembl	74_37	+1	known	missense	c.1583	p.C528F	1.000	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	pfam_DUF3548,pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Rab-GTPase-TBC_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D15	HGNC	ENSG00000121749	tier1	-	-	75	0	0.00	60	51	45.95
TET2	0	genome.wustl.edu	37	4	106157097	106157097	+	Silent	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	4	106157097	106157097	C	T	SNP	TET2	ENST00000380013	human	ensembl	74_37	+1	known	silent	c.1998	p.D666	0.001	NULL	NULL	-	no_errors	TET2	HGNC	ENSG00000168769				44	0	0.00	31	2	6.06
TFDP2	0	genome.wustl.edu	37	3	141811953	141811953	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	141811953	141811953	G	A	SNP	TFDP2	ENST00000489671	human	ensembl	74_37	-1	known	missense	c.32	p.T11I	1.000	pirsf_Transcrpt_fac_DP	pfam_Transc_factor_DP_C,pfam_E2F_TDP,pirsf_Transcrpt_fac_DP	-	no_errors	TFDP2	HGNC	ENSG00000114126	tier1	-	-	50	0	0.00	68	6	8.11
TKTL2	0	genome.wustl.edu	37	4	164394764	164394764	+	Silent	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	4	164394764	164394764	C	T	SNP	TKTL2	ENST00000280605	human	ensembl	74_37	-1	known	silent	c.123	p.S41	0.992	pfam_Transketolase_N	pfam_Transketolase_N,pfam_Transketolase-like_Pyr-bd,pfam_Transketolase_C,pfam_DH_E1,superfamily_Transketo_C/Pyr-ferredox_oxred,smart_Transketolase-like_Pyr-bd	-	no_errors	TKTL2	HGNC	ENSG00000151005	tier1	-	-	40	0	0.00	22	19	46.34
TMEM41B	0	genome.wustl.edu	37	11	9304976	9304976	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	11	9304976	9304976	C	G	SNP	TMEM41B	ENST00000299596	human	ensembl	74_37	-1	known	missense	c.871	p.E291Q	1.000	NULL	pfam_SNARE_assoc	-	no_errors	TMEM41B	HGNC	ENSG00000166471	tier1	-	-	65	0	0.00	71	5	6.58
TNN	0	genome.wustl.edu	37	1	175096214	175096214	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	175096214	175096214	C	T	SNP	TNN	ENST00000239462	human	ensembl	74_37	+1	known	missense	c.3038	p.T1013I	0.330	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNN	HGNC	ENSG00000120332	tier1	-	-	87	0	0.00	101	7	6.48
TP53	0	genome.wustl.edu	37	17	7578394	7578394	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	17	7578394	7578394	T	C	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.536	p.H179R	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	454	0	0.00	107	303	73.90
TSACC	0	genome.wustl.edu	37	1	156314405	156314405	+	Silent	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	156314405	156314405	C	T	SNP	TSACC	ENST00000368251	human	ensembl	74_37	+1	known	silent	c.69	p.L23	0.997	NULL	NULL	-	no_errors	TSACC	HGNC	ENSG00000163467	tier1	-	-	46	0	0.00	47	4	7.84
TTN	0	genome.wustl.edu	37	2	179595754	179595754	+	Silent	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	2	179595754	179595754	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.13906	p.L4636	0.793	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	71	0	0.00	42	24	35.82
TXNRD2	0	genome.wustl.edu	37	22	19885562	19885562	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	22	19885562	19885562	C	A	SNP	TXNRD2	ENST00000535882	human	ensembl	74_37	-1	known	missense	c.771	p.Q257H	1.000	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_OxRdtase_NAD-bd_dom,tigrfam_Thioredoxin/glutathione_Rdtase	pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_Pyr_nucl-diS_OxRdtase_dimer,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_FAD_bind_dom,pfam_GIDA-rel,superfamily_FAD/NAD-linked_Rdtase_dimer,prints_FAD_pyr_nucl-diS_OxRdtase,prints_Hg_reductase,tigrfam_Thioredoxin/glutathione_Rdtase	-	no_errors	TXNRD2	HGNC	ENSG00000184470	tier1	-	-	25	0	0.00	14	5	26.32
UBAP2L	0	genome.wustl.edu	37	1	154242091	154242091	+	RNA	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	154242091	154242091	G	C	SNP	UBAP2L	ENST00000484819	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.202	-	-	-	no_errors	UBAP2L	HGNC	ENSG00000143569	tier1	-	-	14	0	0.00	2	8	80.00
UBR2	0	genome.wustl.edu	37	6	42582821	42582821	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	6	42582821	42582821	G	T	SNP	UBR2	ENST00000372899	human	ensembl	74_37	+1	known	missense	c.998	p.R333L	1.000	NULL	pfam_ClpS_core,pfam_Znf_N-recognin,superfamily_Ribosomal_L7/12_C/ClpS-like,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR2	HGNC	ENSG00000024048				36	0	0.00	16	2	11.11
UPK1B	0	genome.wustl.edu	37	3	118913174	118913174	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	118913174	118913174	A	G	SNP	UPK1B	ENST00000264234	human	ensembl	74_37	+1	known	missense	c.577	p.M193V	0.988	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2	pfam_Tetraspanin/Peripherin,superfamily_Tetraspanin_EC2,prints_Tetraspanin	-	no_errors	UPK1B	HGNC	ENSG00000114638	tier1	-	-	70	0	0.00	54	18	24.66
VWF	0	genome.wustl.edu	37	12	6128641	6128641	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	12	6128641	6128641	G	A	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	missense	c.3943	p.R1315C	1.000	pirsf_VWF,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799	tier1	rs61749395	-	97	0	0.00	682	65	8.70
WASH3P	0	genome.wustl.edu	37	15	102506929	102506930	+	RNA	INS	-	-	TATAG			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	15	102506929	102506930	0	TATAG	INS	WASH3P	ENST00000559884	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	WASH3P	HGNC	ENSG00000185596				11	0	0.00	3	3	50.00
WDR52	0	genome.wustl.edu	37	3	113145025	113145025	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	3	113145025	113145025	G	T	SNP	WDR52	ENST00000393845	human	ensembl	74_37	-1	known	nonsense	c.353	p.S118*	0.871	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR52	HGNC	ENSG00000206530	tier1	-	-	38	0	0.00	63	4	5.97
WDR89	0	genome.wustl.edu	37	14	64066414	64066414	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	14	64066414	64066414	C	T	SNP	WDR89	ENST00000267522	human	ensembl	74_37	-1	known	missense	c.247	p.D83N	0.181	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR89	HGNC	ENSG00000140006	tier1	-	-	32	0	0.00	15	11	42.31
YAP1	0	genome.wustl.edu	37	11	102098302	102098302	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	11	102098302	102098302	G	C	SNP	YAP1	ENST00000282441	human	ensembl	74_37	+1	known	missense	c.1266	p.E422D	0.965	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	YAP1	HGNC	ENSG00000137693	tier1	-	-	83	0	0.00	37	26	41.27
YLPM1	0	genome.wustl.edu	37	14	75245163	75245163	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	14	75245163	75245163	A	G	SNP	YLPM1	ENST00000325680	human	ensembl	74_37	+1	known	missense	c.887	p.Y296C	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	YLPM1	HGNC	ENSG00000119596	tier1	-	-	30	0	0.00	26	17	39.53
YLPM1	0	genome.wustl.edu	37	14	75277108	75277108	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	14	75277108	75277108	G	A	SNP	YLPM1	ENST00000325680	human	ensembl	74_37	+1	known	missense	c.5213	p.R1738Q	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	YLPM1	HGNC	ENSG00000119596	tier1	-	-	18	0	0.00	9	15	62.50
ZBTB18	0	genome.wustl.edu	37	1	244217284	244217284	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	244217284	244217284	G	A	SNP	ZBTB18	ENST00000358704	human	ensembl	74_37	+1	known	missense	c.208	p.D70N	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB18	HGNC	ENSG00000179456	tier1	-	-	23	0	0.00	28	6	17.65
ZMAT1	0	genome.wustl.edu	37	X	101138438	101138439	+	RNA	INS	-	-	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	X	101138438	101138439	-	T	INS	ZMAT1	ENST00000494068	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ZMAT1	HGNC	ENSG00000166432	tier1			20	0	0.00	23	5	17.86
ZNF169	0	genome.wustl.edu	37	9	97062537	97062537	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	9	97062537	97062537	C	A	SNP	ZNF169	ENST00000395395	human	ensembl	74_37	+1	known	missense	c.697	p.H233N	0.948	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF169	HGNC	ENSG00000175787				28	0	0.00	27	2	6.90
ZNF302	0	genome.wustl.edu	37	19	35175973	35175973	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	35175973	35175973	G	A	SNP	ZNF302	ENST00000423823	human	ensembl	74_37	+1	known	missense	c.1031	p.R344K	0.083	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF302	HGNC	ENSG00000089335	tier1	-	-	65	0	0.00	43	23	34.85
ZNF460	0	genome.wustl.edu	37	19	57802468	57802468	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	57802468	57802468	G	C	SNP	ZNF460	ENST00000360338	human	ensembl	74_37	+1	known	missense	c.559	p.E187Q	0.486	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF460	HGNC	ENSG00000197714	tier1	-	-	37	0	0.00	24	10	29.41
ZNF532	0	genome.wustl.edu	37	18	56651290	56651290	+	Silent	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	18	56651290	56651290	G	A	SNP	ZNF532	ENST00000336078	human	ensembl	74_37	+1	known	silent	c.3498	p.L1166	0.039	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF532	HGNC	ENSG00000074657	tier1	-	-	63	0	0.00	61	7	10.29
ZNF541	0	genome.wustl.edu	37	19	48048783	48048783	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	48048783	48048783	G	A	SNP	ZNF541	ENST00000314121	human	ensembl	74_37	-1	known	missense	c.1003	p.P335S	0.001	NULL	pfam_ELM2_dom,pfam_Znf_C2H2,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_SANT/Myb,pfscan_ELM2_dom,pfscan_Znf_C2H2	-	no_errors	ZNF541	HGNC	ENSG00000118156	tier1	-	-	100	0	0.00	50	20	28.57
ZNF578	0	genome.wustl.edu	37	19	53014448	53014448	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	19	53014448	53014448	C	T	SNP	ZNF578	ENST00000421239	human	ensembl	74_37	+1	known	nonsense	c.814	p.R272*	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF578	HGNC	ENSG00000258405	tier1	-	-	88	0	0.00	76	5	6.10
ZNF644	0	genome.wustl.edu	37	1	91406192	91406192	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	91406192	91406192	G	T	SNP	ZNF644	ENST00000337393	human	ensembl	74_37	-1	known	missense	c.719	p.T240K	0.979	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF644	HGNC	ENSG00000122482				25	0	0.00	34	2	5.56
ZNF678	0	genome.wustl.edu	37	1	227751338	227751338	+	RNA	SNP	G	G	T			TCGA-LN-A4A8-01A-32D-A27G-09	TCGA-LN-A4A8-10A-01D-A27G-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ebed6452-e3f7-49f5-9596-9ac4a0add3eb	06c9b1ff-4f68-402f-889f-6b6a8d0c7947	1	227751338	227751338	G	T	SNP	ZNF678	ENST00000465266	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	ZNF678	HGNC	ENSG00000181450	tier1	-	-	68	0	0.00	44	35	44.30
