Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
101928757	0	genome.wustl.edu	37	10	17908632	17908632	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	10	17908632	17908632	G	C	SNP	101928757	ENST00000331429	human	ensembl	74_37	+1	novel	missense	c.1845	p.L615F	0.994	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,pfam_FN_type2_col-bd,pfam_Ricin_B_lectin,pfam_Herpes_UL45-like,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin,prints_AntifreezeII	-	no_errors	MRC1L1	Clone_based_vega_gene	ENSG00000183748	tier1	-	-	60	0	0.00	17	17	48.57
ABCA10	0	genome.wustl.edu	37	17	67193205	67193205	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	17	67193205	67193205	C	T	SNP	ABCA10	ENST00000269081	human	ensembl	74_37	-1	known	missense	c.1234	p.G412S	1.000	superfamily_P-loop_NTPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA10	HGNC	ENSG00000154263	tier1	-	-	46	0	0.00	24	10	29.41
ABCA3	0	genome.wustl.edu	37	16	2328323	2328323	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	16	2328323	2328323	C	G	SNP	ABCA3	ENST00000301732	human	ensembl	74_37	-1	known	missense	c.4684	p.E1562Q	0.999	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA3	HGNC	ENSG00000167972	tier1	-	-	58	0	0.00	47	11	18.97
ACSS2	0	genome.wustl.edu	37	20	33515022	33515022	+	RNA	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	20	33515022	33515022	G	A	SNP	ACSS2	ENST00000476922	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.772	-	-	-	no_errors	ACSS2	HGNC	ENSG00000131069	tier1	-	-	54	0	0.00	38	5	11.63
ACTR6	0	genome.wustl.edu	37	12	100603884	100603884	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	12	100603884	100603884	A	G	SNP	ACTR6	ENST00000188312	human	ensembl	74_37	+1	known	missense	c.413	p.D138G	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related	-	no_errors	ACTR6	HGNC	ENSG00000075089	tier1	-	-	51	0	0.00	34	7	17.07
ACVR1C	0	genome.wustl.edu	37	2	158390538	158390538	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	158390538	158390538	C	T	SNP	ACVR1C	ENST00000243349	human	ensembl	74_37	-1	known	silent	c.1374	p.G458	0.799	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,pfam_Activin_rcpt,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ACVR1C	HGNC	ENSG00000123612	tier1	-	-	34	0	0.00	16	5	23.81
ADAMTS9	0	genome.wustl.edu	37	3	64636815	64636815	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	3	64636815	64636815	G	T	SNP	ADAMTS9	ENST00000498707	human	ensembl	74_37	-1	known	missense	c.1341	p.N447K	1.000	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS9	HGNC	ENSG00000163638	tier1	-	-	54	0	0.00	16	16	50.00
ADARB2	0	genome.wustl.edu	37	10	1229040	1229040	+	RNA	SNP	T	T	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	10	1229040	1229040	T	C	SNP	ADARB2	ENST00000474762	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ADARB2	HGNC	ENSG00000185736	tier1	-	-	36	0	0.00	23	9	28.12
ADCK4	0	genome.wustl.edu	37	19	41206003	41206003	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	41206003	41206003	G	T	SNP	ADCK4	ENST00000324464	human	ensembl	74_37	-1	known	missense	c.1112	p.A371D	1.000	superfamily_Kinase-like_dom	pfam_UbiB_dom,superfamily_Kinase-like_dom	-	no_errors	ADCK4	HGNC	ENSG00000123815	tier1	-	-	34	0	0.00	18	4	18.18
ADD2	0	genome.wustl.edu	37	2	70890767	70890767	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	70890767	70890767	C	T	SNP	ADD2	ENST00000264436	human	ensembl	74_37	-1	known	silent	c.1971	p.T657	0.000	NULL	pfam_Aldolase_II/adducin_N,superfamily_Aldolase_II/adducin_N	-	no_errors	ADD2	HGNC	ENSG00000075340	tier1	-	-	56	0	0.00	43	13	23.21
ADORA2B	0	genome.wustl.edu	37	17	15878282	15878282	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	17	15878282	15878282	G	T	SNP	ADORA2B	ENST00000304222	human	ensembl	74_37	+1	known	missense	c.625	p.A209S	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Adeno_A2B_rcpt,prints_GPCR_Rhodpsn,prints_Adenosn_rcpt	-	no_errors	ADORA2B	HGNC	ENSG00000170425	tier1	-	-	72	0	0.00	71	4	5.26
AKR1A1	0	genome.wustl.edu	37	1	46035627	46035627	+	Silent	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	46035627	46035627	G	A	SNP	AKR1A1	ENST00000351829	human	ensembl	74_37	+1	known	silent	c.977	p.*326	1.000	NULL	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1A1	HGNC	ENSG00000117448	tier1	-	-	49	0	0.00	33	12	26.67
ANKRD34C	0	genome.wustl.edu	37	15	79586906	79586906	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	15	79586906	79586906	C	T	SNP	ANKRD34C	ENST00000421388	human	ensembl	74_37	+1	known	missense	c.1280	p.P427L	0.955	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD34C	HGNC	ENSG00000235711	tier1	-	-	33	0	0.00	15	16	51.61
ANO4	0	genome.wustl.edu	37	12	101295550	101295550	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	12	101295550	101295550	G	A	SNP	ANO4	ENST00000538618	human	ensembl	74_37	+1	known	missense	c.485	p.R162K	1.000	NULL	NULL	-	no_errors	ANO4	HGNC	ENSG00000151572	tier1	-	-	34	0	0.00	11	7	36.84
ANXA1	0	genome.wustl.edu	37	9	75780136	75780136	+	RNA	SNP	A	A	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	9	75780136	75780136	A	G	SNP	ANXA1	ENST00000489109	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	ANXA1	HGNC	ENSG00000135046	tier1	-	-	31	0	0.00	19	20	51.28
AOC3	0	genome.wustl.edu	37	17	41006530	41006530	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	17	41006530	41006530	G	C	SNP	AOC3	ENST00000308423	human	ensembl	74_37	+1	known	missense	c.1666	p.E556Q	0.983	pfam_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_C	pfam_Cu_amine_oxidase_C,pfam_Cu_amine_oxidase_N2,pfam_Cu_amine_oxidase_N3,superfamily_Cu_amine_oxidase_C,superfamily_Cu_amine_oxidase_N-reg,prints_Cu_amine_oxidase	-	no_errors	AOC3	HGNC	ENSG00000131471	tier1	-	-	92	0	0.00	41	26	38.81
APOE	0	genome.wustl.edu	37	19	45411884	45411884	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	45411884	45411884	C	A	SNP	APOE	ENST00000252486	human	ensembl	74_37	+1	known	missense	c.331	p.L111M	0.010	pfam_ApoA1_A4_E	pfam_ApoA1_A4_E	-	no_errors	APOE	HGNC	ENSG00000130203	tier1	-	-	43	0	0.00	33	6	15.38
ARHGAP26	0	genome.wustl.edu	37	5	142513550	142513550	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	5	142513550	142513550	G	T	SNP	ARHGAP26	ENST00000274498	human	ensembl	74_37	+1	known	missense	c.1717	p.D573Y	0.990	superfamily_Rho_GTPase_activation_prot	pfam_RhoGAP_dom,pfam_SH3_domain,pfam_SH3_2,pfam_IRSp53/MIM_homology_IMD,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_RhoGAP_dom,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP26	HGNC	ENSG00000145819	tier1	-	-	90	0	0.00	33	37	52.86
ASTN2	0	genome.wustl.edu	37	9	119976989	119976991	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	9	119976989	119976991	CAG	-	DEL	ASTN2	ENST00000313400	human	ensembl	74_37	-1	known	in_frame_del	c.663_661	p.L221in_frame_del	0.994:1.000:1.000	NULL	pfam_MACPF,superfamily_Fibronectin_type3,smart_MACPF	-	no_errors	ASTN2	HGNC	ENSG00000148219	tier1			39	0	0.00	13	2	13.33
ATN1	0	genome.wustl.edu	37	12	7046294	7046294	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	12	7046294	7046294	G	C	SNP	ATN1	ENST00000356654	human	ensembl	74_37	+1	known	missense	c.1864	p.A622P	0.984	pfam_Atrophin-like	pfam_Atrophin-like,prints_Atrophin-1	-	no_errors	ATN1	HGNC	ENSG00000111676	tier1	-	-	29	0	0.00	19	28	59.57
ATP13A1	0	genome.wustl.edu	37	19	19766338	19766338	+	Silent	SNP	T	T	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	19766338	19766338	T	C	SNP	ATP13A1	ENST00000357324	human	ensembl	74_37	-1	known	silent	c.1395	p.E465	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A1	HGNC	ENSG00000105726	tier1	-	-	72	0	0.00	39	14	25.93
B3GNT5	0	genome.wustl.edu	37	3	182987961	182987961	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	3	182987961	182987961	C	G	SNP	B3GNT5	ENST00000326505	human	ensembl	74_37	+1	known	missense	c.375	p.I125M	0.995	pfam_Glyco_trans_31	pfam_Glyco_trans_31,superfamily_Luciferase-like_dom	-	no_errors	B3GNT5	HGNC	ENSG00000176597	tier1	-	-	33	0	0.00	28	15	34.88
BNC2	0	genome.wustl.edu	37	9	16552681	16552681	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	9	16552681	16552681	G	T	SNP	BNC2	ENST00000380672	human	ensembl	74_37	-1	known	missense	c.516	p.S172R	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC2	HGNC	ENSG00000173068	tier1	-	-	66	0	0.00	57	4	6.56
BRD4	0	genome.wustl.edu	37	19	15367010	15367010	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	15367010	15367010	T	C	SNP	BRD4	ENST00000263377	human	ensembl	74_37	-1	known	missense	c.1616	p.K539R	1.000	NULL	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BRD4	HGNC	ENSG00000141867	tier1	-	-	78	0	0.00	52	31	37.35
BSG	0	genome.wustl.edu	37	19	577776	577776	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	577776	577776	G	A	SNP	BSG	ENST00000333511	human	ensembl	74_37	+1	known	missense	c.70	p.G24S	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	BSG	HGNC	ENSG00000172270	tier1	-	-	16	0	0.00	9	4	30.77
BTG3	0	genome.wustl.edu	37	21	18977308	18977308	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	21	18977308	18977308	G	T	SNP	BTG3	ENST00000339775	human	ensembl	74_37	-1	known	missense	c.181	p.R61S	1.000	pfam_Anti_prolifrtn,smart_Anti_prolifrtn	pfam_Anti_prolifrtn,smart_Anti_prolifrtn,prints_Anti_prolifrtn	-	no_errors	BTG3	HGNC	ENSG00000154640				43	0	0.00	29	2	6.45
C16orf78	0	genome.wustl.edu	37	16	49430446	49430446	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	16	49430446	49430446	G	C	SNP	C16orf78	ENST00000299191	human	ensembl	74_37	+1	known	missense	c.507	p.Q169H	0.002	NULL	NULL	-	no_errors	C16orf78	HGNC	ENSG00000166152	tier1	-	-	28	0	0.00	21	8	27.59
C1QC	0	genome.wustl.edu	37	1	22974181	22974181	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	22974181	22974181	G	A	SNP	C1QC	ENST00000374637	human	ensembl	74_37	+1	known	missense	c.643	p.E215K	0.489	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QC	HGNC	ENSG00000159189	tier1	-	-	54	0	0.00	27	12	30.77
C1orf172	0	genome.wustl.edu	37	1	27278224	27278224	+	Nonsense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	27278224	27278224	G	C	SNP	C1orf172	ENST00000320567	human	ensembl	74_37	-1	known	nonsense	c.648	p.Y216*	1.000	NULL	NULL	-	no_errors	C1orf172	HGNC	ENSG00000175707	tier1	-	-	51	0	0.00	27	6	18.18
C3	0	genome.wustl.edu	37	19	6697514	6697514	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	6697514	6697514	C	T	SNP	C3	ENST00000245907	human	ensembl	74_37	-1	known	silent	c.2637	p.K879	0.969	NULL	pfam_A2M_comp,pfam_A-macroglobulin_rcpt-bd,pfam_Macroglobln_a2,pfam_Netrin_module_non-TIMP,pfam_A2M_N_2,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Anaphylatoxin/fibulin,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_TIMP-like_OB-fold,superfamily_A-macroglobulin_rcpt-bd,superfamily_Anaphylatoxin_comp_syst,smart_Anaphylatoxin/fibulin,smart_Netrin_module_non-TIMP,prints_Anaphylatoxn_comp_syst_dom,pfscan_Anaphylatoxin/fibulin,pfscan_Netrin_domain	-	no_errors	C3	HGNC	ENSG00000125730	tier1	-	-	100	0	0.00	73	42	36.52
C4orf27	0	genome.wustl.edu	37	4	170652975	170652975	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	4	170652975	170652975	C	G	SNP	C4orf27	ENST00000393381	human	ensembl	74_37	-1	known	missense	c.789	p.E263D	1.000	pfam_DUF2228_C2H2_APLF-like	pfam_DUF2228_C2H2_APLF-like	-	no_errors	C4orf27	HGNC	ENSG00000056050	tier1	-	-	59	0	0.00	62	26	29.55
C6orf25	0	genome.wustl.edu	37	6	31692525	31692525	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	6	31692525	31692525	C	T	SNP	C6orf25	ENST00000375809	human	ensembl	74_37	+1	known	silent	c.544	p.L182	1.000	NULL	NULL	-	no_errors	C6orf25	HGNC	ENSG00000204420	tier1	-	-	30	0	0.00	18	9	33.33
C8G	0	genome.wustl.edu	37	9	139841200	139841200	+	RNA	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	9	139841200	139841200	G	C	SNP	C8G	ENST00000465773	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.281	-	-	-	no_errors	C8G	HGNC	ENSG00000176919	tier1	-	-	88	0	0.00	43	23	34.85
CACNA1B	0	genome.wustl.edu	37	9	141016131	141016131	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	9	141016131	141016131	G	T	SNP	CACNA1B	ENST00000371355	human	ensembl	74_37	+1	known	nonsense	c.6703	p.E2235*	0.998	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_N_a1su,prints_PKD_2	-	no_errors	CACNA1B	HGNC	ENSG00000148408	tier1	-	-	51	0	0.00	16	12	42.86
CACNA1H	0	genome.wustl.edu	37	16	1261716	1261716	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	16	1261716	1261716	G	A	SNP	CACNA1H	ENST00000348261	human	ensembl	74_37	+1	known	missense	c.4477	p.A1493T	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_PKD_2	-	no_errors	CACNA1H	HGNC	ENSG00000196557	tier1	-	-	35	0	0.00	44	6	12.00
CARD8	0	genome.wustl.edu	37	19	48685630	48685631	+	RNA	INS	-	-	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	48685630	48685631	-	A	INS	CARD8	ENST00000600800	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	CARD8	HGNC	ENSG00000105483	tier1			14	0	0.00	12	3	20.00
CASP8	0	genome.wustl.edu	37	2	202149834	202149834	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	202149834	202149834	G	T	SNP	CASP8	ENST00000358485	human	ensembl	74_37	+1	known	missense	c.1275	p.Q425H	0.002	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core	pfam_DED,pfam_Pept_C14_caspase,superfamily_DEATH-like_dom,smart_DED,smart_Pept_C14A_p45_core,pfscan_DED,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP8	HGNC	ENSG00000064012	tier1	-	-	41	0	0.00	9	12	57.14
CASP8	0	genome.wustl.edu	37	2	202149919	202149919	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	202149919	202149919	G	C	SNP	CASP8	ENST00000358485	human	ensembl	74_37	+1	known	missense	c.1360	p.D454H	0.004	pfam_Pept_C14_caspase,smart_Pept_C14A_p45_core,pfscan_Pept_C14_p10	pfam_DED,pfam_Pept_C14_caspase,superfamily_DEATH-like_dom,smart_DED,smart_Pept_C14A_p45_core,pfscan_DED,pfscan_Pept_C14_p10,pfscan_Pept_C14_ICE_p20,prints_Pept_C14A_p45_core	-	no_errors	CASP8	HGNC	ENSG00000064012	tier1	-	-	54	0	0.00	19	17	47.22
CCDC178	0	genome.wustl.edu	37	18	30873263	30873263	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	18	30873263	30873263	G	T	SNP	CCDC178	ENST00000406524	human	ensembl	74_37	-1	known	missense	c.1036	p.Q346K	0.002	NULL	NULL	-	no_errors	CCDC178	HGNC	ENSG00000166960	tier1	-	-	34	0	0.00	20	3	13.04
CCDC34	0	genome.wustl.edu	37	11	27384468	27384468	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	11	27384468	27384468	C	T	SNP	CCDC34	ENST00000328697	human	ensembl	74_37	-1	known	missense	c.274	p.D92N	0.215	NULL	NULL	-	no_errors	CCDC34	HGNC	ENSG00000109881	tier1	-	-	39	0	0.00	26	11	29.73
CCDC62	0	genome.wustl.edu	37	12	123286164	123286164	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	12	123286164	123286164	G	T	SNP	CCDC62	ENST00000253079	human	ensembl	74_37	+1	known	nonsense	c.1471	p.E491*	0.011	NULL	superfamily_Prefoldin	-	no_errors	CCDC62	HGNC	ENSG00000130783	tier1	-	-	61	0	0.00	38	10	20.83
CCDC67	0	genome.wustl.edu	37	11	93141459	93141459	+	Silent	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	11	93141459	93141459	G	A	SNP	CCDC67	ENST00000298050	human	ensembl	74_37	+1	known	silent	c.1389	p.E463	1.000	NULL	superfamily_MHC_II-assoc_invariant_trimer	-	no_errors	CCDC67	HGNC	ENSG00000165325	tier1	-	-	29	0	0.00	11	8	42.11
CD22	0	genome.wustl.edu	37	19	35828840	35828840	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	35828840	35828840	A	G	SNP	CD22	ENST00000085219	human	ensembl	74_37	+1	known	missense	c.901	p.K301E	0.494	pfam_Immunoglobulin,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Immunoglobulin,pfam_Ig_I-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CD22	HGNC	ENSG00000012124	tier1	-	-	55	0	0.00	43	5	10.42
CD38	0	genome.wustl.edu	37	4	15780234	15780234	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	4	15780234	15780234	G	C	SNP	CD38	ENST00000226279	human	ensembl	74_37	+1	known	missense	c.197	p.R66P	0.027	pfam_ADP-ribosyl_cyclase	pfam_ADP-ribosyl_cyclase	-	no_errors	CD38	HGNC	ENSG00000004468	tier1	-	-	73	0	0.00	31	25	44.64
CDR2	0	genome.wustl.edu	37	16	22358728	22358728	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	16	22358728	22358728	C	T	SNP	CDR2	ENST00000268383	human	ensembl	74_37	-1	known	missense	c.923	p.R308H	1.000	NULL	NULL	-	no_errors	CDR2	HGNC	ENSG00000140743	tier1	-	-	46	0	0.00	53	6	10.17
CELSR2	0	genome.wustl.edu	37	1	109801662	109801662	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	109801662	109801662	G	A	SNP	CELSR2	ENST00000271332	human	ensembl	74_37	+1	known	missense	c.3919	p.E1307K	0.998	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126				15	0	0.00	10	2	16.67
CENPE	0	genome.wustl.edu	37	4	104065534	104065534	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	4	104065534	104065534	A	G	SNP	CENPE	ENST00000265148	human	ensembl	74_37	-1	known	missense	c.5099	p.V1700A	0.001	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_STAT_TF_coiled-coil,superfamily_Signal_recog_particl_SRP54_hlx,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	CENPE	HGNC	ENSG00000138778	tier1	-	-	48	0	0.00	33	22	40.00
CFP	0	genome.wustl.edu	37	X	47486320	47486320	+	Silent	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	X	47486320	47486320	G	A	SNP	CFP	ENST00000247153	human	ensembl	74_37	-1	known	silent	c.792	p.G264	0.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	CFP	HGNC	ENSG00000126759	tier1	-	-	22	0	0.00	8	10	55.56
CGN	0	genome.wustl.edu	37	1	151491113	151491113	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	151491113	151491113	C	T	SNP	CGN	ENST00000271636	human	ensembl	74_37	+1	known	nonsense	c.118	p.R40*	0.869	NULL	pfam_Myosin_tail	-	no_errors	CGN	HGNC	ENSG00000143375	tier1	-	-	57	0	0.00	55	8	12.70
CHD5	0	genome.wustl.edu	37	1	6202187	6202187	+	Splice_Site	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	6202187	6202187	C	T	SNP	CHD5	ENST00000262450	human	ensembl	74_37	-1	known	splice_site	c.2436+1	e15+1	1.000	-	-	-	no_errors	CHD5	HGNC	ENSG00000116254	tier1	-	-	39	0	0.00	16	15	48.39
CIZ1	0	genome.wustl.edu	37	9	130931405	130931405	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	9	130931405	130931405	C	T	SNP	CIZ1	ENST00000538431	human	ensembl	74_37	-1	known	missense	c.2299	p.E767K	1.000	NULL	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like,pfscan_Znf_C2H2_matrin	-	no_errors	CIZ1	HGNC	ENSG00000148337	tier1	-	-	63	0	0.00	33	14	29.79
CLINT1	0	genome.wustl.edu	37	5	157214829	157214829	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	5	157214829	157214829	T	C	SNP	CLINT1	ENST00000296951	human	ensembl	74_37	-1	known	missense	c.1703	p.N568S	0.065	NULL	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	-	no_errors	CLINT1	HGNC	ENSG00000113282	tier1	-	-	54	0	0.00	19	29	60.42
COBLL1	0	genome.wustl.edu	37	2	165559719	165559719	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	165559719	165559719	G	A	SNP	COBLL1	ENST00000194871	human	ensembl	74_37	-1	known	missense	c.1435	p.P479S	0.276	NULL	pfam_Cordon-bleu_ubiquitin_domain,pfscan_WH2_dom	-	no_errors	COBLL1	HGNC	ENSG00000082438	tier1	-	-	37	0	0.00	29	12	29.27
COL4A3	0	genome.wustl.edu	37	2	228111451	228111451	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	228111451	228111451	C	T	SNP	COL4A3	ENST00000396578	human	ensembl	74_37	+1	known	silent	c.438	p.I146	0.785	pfam_Collagen	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A3	HGNC	ENSG00000169031	tier1	-	-	48	0	0.00	45	15	25.00
CORO2B	0	genome.wustl.edu	37	15	68987554	68987554	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	15	68987554	68987554	T	A	SNP	CORO2B	ENST00000566799	human	ensembl	74_37	+1	known	missense	c.292	p.F98I	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_DUF1900,pfam_DUF1899,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	CORO2B	HGNC	ENSG00000103647	tier1	-	-	22	0	0.00	17	7	29.17
CXADR	0	genome.wustl.edu	37	21	18938008	18938008	+	Nonstop_Mutation	SNP	T	T	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	21	18938008	18938008	T	C	SNP	CXADR	ENST00000284878	human	ensembl	74_37	+1	known	nonstop	c.1096	p.*366Q	0.999	NULL	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	CXADR	HGNC	ENSG00000154639	tier1	-	-	40	0	0.00	26	12	30.77
CXCR4	0	genome.wustl.edu	37	2	136872988	136872988	+	Silent	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	136872988	136872988	G	A	SNP	CXCR4	ENST00000409817	human	ensembl	74_37	-1	known	silent	c.522	p.P174	0.015	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_Chemokine_CXCR4_N_dom,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CXCR4,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt	-	no_errors	CXCR4	HGNC	ENSG00000121966	tier1	-	-	58	0	0.00	27	20	42.55
CYP2B6	0	genome.wustl.edu	37	19	41515957	41515957	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	41515957	41515957	C	T	SNP	CYP2B6	ENST00000324071	human	ensembl	74_37	+1	known	missense	c.881	p.S294L	0.001	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2B-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_E_grp-I_CYP2A-like	-	no_errors	CYP2B6	HGNC	ENSG00000197408	tier1	-	-	114	0	0.00	58	57	49.57
DAAM1	0	genome.wustl.edu	37	14	59834304	59834304	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	14	59834304	59834304	G	A	SNP	DAAM1	ENST00000351081	human	ensembl	74_37	+1	known	missense	c.3014	p.R1005H	1.000	smart_FH2_Formin	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,superfamily_ARM-type_fold,superfamily_tRNA-bd_arm,smart_FH2_Formin	-	no_errors	DAAM1	HGNC	ENSG00000100592	tier1	rs199742099	-	24	0	0.00	21	14	40.00
DDAH2	0	genome.wustl.edu	37	6	31696815	31696815	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	6	31696815	31696815	G	A	SNP	DDAH2	ENST00000375787	human	ensembl	74_37	-1	known	nonsense	c.124	p.Q42*	1.000	NULL	pfam_Amidino_trans	-	no_errors	DDAH2	HGNC	ENSG00000213722	tier1	-	-	52	0	0.00	46	8	14.81
DDX39B	0	genome.wustl.edu	37	6	31498374	31498374	+	RNA	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	6	31498374	31498374	G	A	SNP	DDX39B	ENST00000462421	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	DDX39B	HGNC	ENSG00000198563	tier1	-	-	15	0	0.00	8	10	55.56
DECR2	0	genome.wustl.edu	37	16	460221	460221	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	16	460221	460221	C	T	SNP	DECR2	ENST00000397710	human	ensembl	74_37	+1	known	missense	c.503	p.S168F	0.000	NULL	pfam_DH_sc/Rdtase_SDR	-	no_errors	DECR2	HGNC	ENSG00000242612	tier1	-	-	37	0	0.00	13	10	43.48
DIP2A	0	genome.wustl.edu	37	21	47970533	47970533	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	21	47970533	47970533	C	T	SNP	DIP2A	ENST00000318711	human	ensembl	74_37	+1	known	silent	c.2718	p.L906	0.003	NULL	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2A	HGNC	ENSG00000160305	tier1	-	-	67	0	0.00	30	13	30.23
DNAH8	0	genome.wustl.edu	37	6	38743696	38743696	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	6	38743696	38743696	T	C	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	missense	c.1280	p.L427S	0.072	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721				44	0	0.00	32	4	11.11
DNM1	0	genome.wustl.edu	37	9	130996366	130996366	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	9	130996366	130996366	G	A	SNP	DNM1	ENST00000372923	human	ensembl	74_37	+1	known	missense	c.1402	p.E468K	1.000	pfam_Dynamin_central	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin_SF	-	no_errors	DNM1	HGNC	ENSG00000106976	tier1	-	-	62	0	0.00	24	14	36.84
DOK4	0	genome.wustl.edu	37	16	57513551	57513551	+	RNA	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	16	57513551	57513551	C	G	SNP	DOK4	ENST00000561918	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DOK4	HGNC	ENSG00000125170	tier1	-	-	104	0	0.00	62	25	28.74
DSPP	0	genome.wustl.edu	37	4	88536238	88536238	+	Silent	SNP	T	T	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	4	88536238	88536238	T	C	SNP	DSPP	ENST00000282478	human	ensembl	74_37	+1	known	silent	c.2424	p.D808	0.012	NULL	NULL	-	no_errors	DSPP	HGNC	ENSG00000152591	tier1	-	-	176	0	0.00	113	6	5.04
DSPP	0	genome.wustl.edu	37	4	88536271	88536271	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	4	88536271	88536271	C	A	SNP	DSPP	ENST00000282478	human	ensembl	74_37	+1	known	missense	c.2457	p.D819E	0.000	NULL	NULL	-	no_errors	DSPP	HGNC	ENSG00000152591	tier1	-	-	176	0	0.00	96	6	5.88
DYNC2H1	0	genome.wustl.edu	37	11	103158284	103158284	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	11	103158284	103158284	G	C	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.11066	p.R3689T	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	42	0	0.00	9	19	67.86
E2F3	0	genome.wustl.edu	37	6	20490452	20490452	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	6	20490452	20490452	C	G	SNP	E2F3	ENST00000346618	human	ensembl	74_37	+1	known	missense	c.1189	p.L397V	0.960	NULL	pfam_E2F_TDP	-	no_errors	E2F3	HGNC	ENSG00000112242	tier1	-	-	83	0	0.00	46	28	37.84
EAF2	0	genome.wustl.edu	37	3	121591519	121591519	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	3	121591519	121591519	C	G	SNP	EAF2	ENST00000273668	human	ensembl	74_37	+1	known	missense	c.620	p.S207C	0.129	NULL	pfam_Tscrpt_elong_fac_Eaf_N	-	no_errors	EAF2	HGNC	ENSG00000145088	tier1	-	-	37	0	0.00	19	11	35.48
ENO1	0	genome.wustl.edu	37	1	8928111	8928111	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	8928111	8928111	C	T	SNP	ENO1	ENST00000234590	human	ensembl	74_37	-1	known	silent	c.246	p.L82	0.875	pfam_Enolase_N,pirsf_Enolase,tigrfam_Enolase	pfam_Enolase_C,pfam_Enolase_N,pirsf_Enolase,prints_Enolase,tigrfam_Enolase	-	no_errors	ENO1	HGNC	ENSG00000074800	tier1	-	-	49	0	0.00	35	7	16.67
ENSG00000267439	0	genome.wustl.edu	37	19	36243179	36243179	+	RNA	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	36243179	36243179	G	A	SNP	ENSG00000267439	ENST00000591091	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC002398.11	Clone_based_vega_gene	ENSG00000267439	tier1	-	-	59	0	0.00	19	8	29.63
ENSG00000272056	0	genome.wustl.edu	37	2	27276570	27276570	+	RNA	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	27276570	27276570	C	T	SNP	ENSG00000272056	ENST00000607407	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-503P10.1	Clone_based_vega_gene	ENSG00000272056	tier1	-	-	46	0	0.00	17	8	32.00
ENSG00000272656	0	genome.wustl.edu	37	3	139068148	139068149	+	RNA	INS	-	-	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	3	139068148	139068149	-	T	INS	ENSG00000272656	ENST00000608472	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-219D15.3	Clone_based_vega_gene	ENSG00000272656	tier1			46	0	0.00	25	3	10.71
EPS8L3	0	genome.wustl.edu	37	1	110300579	110300580	+	Frame_Shift_Ins	INS	-	-	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	110300579	110300580	-	T	INS	EPS8L3	ENST00000369805	human	ensembl	74_37	-1	known	frame_shift_ins	c.822_821	p.N274fs	0.016:0.352	NULL	pfam_PTB,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	EPS8L3	HGNC	ENSG00000198758	tier1			125	0	0.00	104	18	14.75
ERCC4	0	genome.wustl.edu	37	16	14029602	14029602	+	Splice_Site	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	16	14029602	14029602	C	A	SNP	ERCC4	ENST00000311895	human	ensembl	74_37	+1	known	splice_site	c.1811+2	e8+2	1.000	-	-	-	no_errors	ERCC4	HGNC	ENSG00000175595	tier1	-	-	42	0	0.00	26	5	16.13
EXOC1	0	genome.wustl.edu	37	4	56737000	56737000	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	4	56737000	56737000	G	T	SNP	EXOC1	ENST00000346134	human	ensembl	74_37	+1	known	nonsense	c.760	p.E254*	0.999	pfam_Exocyst_Exoc1/SEC3	pfam_Exocyst_Exoc1/SEC3	-	no_errors	EXOC1	HGNC	ENSG00000090989	tier1	-	-	35	0	0.00	17	3	15.00
EXOC8	0	genome.wustl.edu	37	1	231472549	231472549	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	231472549	231472549	C	T	SNP	EXOC8	ENST00000360394	human	ensembl	74_37	-1	known	missense	c.943	p.D315N	0.160	NULL	superfamily_Cullin_repeat-like_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	EXOC8	HGNC	ENSG00000116903	tier1	-	-	47	0	0.00	40	14	25.93
F2	0	genome.wustl.edu	37	11	46749672	46749672	+	Silent	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	11	46749672	46749672	G	A	SNP	F2	ENST00000311907	human	ensembl	74_37	+1	known	silent	c.1257	p.E419	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pirsf_Prothrombin/thrombin,pfscan_Peptidase_S1,prints_Prothrombin/thrombin	pfam_Peptidase_S1,pfam_Kringle,pfam_Thrombin_light_chain,pfam_GLA_domain,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,superfamily_GLA_domain,smart_GLA_domain,smart_Kringle,smart_Peptidase_S1,pirsf_Prothrombin/thrombin,pfscan_GLA_domain,pfscan_Kringle,pfscan_Peptidase_S1,prints_Prothrombin/thrombin,prints_Peptidase_S1A,prints_GLA_domain	-	no_errors	F2	HGNC	ENSG00000180210	tier1	-	-	39	0	0.00	25	15	37.50
FADD	0	genome.wustl.edu	37	11	70049577	70049577	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	11	70049577	70049577	C	G	SNP	FADD	ENST00000301838	human	ensembl	74_37	+1	known	missense	c.12	p.F4L	0.868	pfam_DED,superfamily_DEATH-like_dom,smart_DED,pirsf_FADD,pfscan_DED	pfam_Death_domain,pfam_DED,superfamily_DEATH-like_dom,smart_DED,smart_Death_domain,pirsf_FADD,pfscan_Death_domain,pfscan_DED	-	no_errors	FADD	HGNC	ENSG00000168040	tier1	-	-	59	0	0.00	246	14	5.38
FADD	0	genome.wustl.edu	37	11	70049640	70049640	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	11	70049640	70049640	C	T	SNP	FADD	ENST00000301838	human	ensembl	74_37	+1	known	silent	c.75	p.F25	0.999	pfam_DED,superfamily_DEATH-like_dom,smart_DED,pirsf_FADD,pfscan_DED	pfam_Death_domain,pfam_DED,superfamily_DEATH-like_dom,smart_DED,smart_Death_domain,pirsf_FADD,pfscan_Death_domain,pfscan_DED	-	no_errors	FADD	HGNC	ENSG00000168040	tier1	-	-	70	0	0.00	331	24	6.76
FAM162A	0	genome.wustl.edu	37	3	122121698	122121698	+	Silent	SNP	A	A	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	3	122121698	122121698	A	C	SNP	FAM162A	ENST00000477892	human	ensembl	74_37	+1	known	silent	c.126	p.T42	0.916	pfam_DUF1075	pfam_DUF1075	-	no_errors	FAM162A	HGNC	ENSG00000114023	tier1	-	-	54	0	0.00	43	9	17.31
FAM179B	0	genome.wustl.edu	37	14	45515859	45515859	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	14	45515859	45515859	A	G	SNP	FAM179B	ENST00000361462	human	ensembl	74_37	+1	novel	missense	c.4266	p.I1422M	0.934	pfam_CLASP_N_dom,superfamily_ARM-type_fold	pfam_CLASP_N_dom,superfamily_ARM-type_fold	-	no_errors	FAM179B	HGNC	ENSG00000198718	tier1	-	-	44	0	0.00	37	21	36.21
FAM194B	0	genome.wustl.edu	37	13	46124142	46124142	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	13	46124142	46124142	G	A	SNP	FAM194B	ENST00000298738	human	ensembl	74_37	-1	known	missense	c.1532	p.A511V	0.000	NULL	NULL	-	no_errors	FAM194B	HGNC	ENSG00000165837	tier1	-	-	83	0	0.00	35	39	52.70
FAM195B	0	genome.wustl.edu	37	17	79782177	79782177	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	17	79782177	79782177	C	T	SNP	FAM195B	ENST00000455127	human	ensembl	74_37	-1	known	missense	c.113	p.R38H	1.000	NULL	NULL	-	no_errors	FAM195B	HGNC	ENSG00000225663	tier1	-	-	159	0	0.00	109	13	10.66
FAP	0	genome.wustl.edu	37	2	163031461	163031461	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	163031461	163031461	C	T	SNP	FAP	ENST00000188790	human	ensembl	74_37	-1	known	missense	c.1885	p.V629I	1.000	pfam_Peptidase_S9	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	FAP	HGNC	ENSG00000078098	tier1	rs141879753	-	50	0	0.00	26	6	18.75
FBN1	0	genome.wustl.edu	37	15	48936865	48936865	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	15	48936865	48936865	C	T	SNP	FBN1	ENST00000316623	human	ensembl	74_37	-1	known	silent	c.102	p.V34	0.993	pirsf_FBN	pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN1	HGNC	ENSG00000166147	tier1	-	-	70	0	0.00	36	31	46.27
FMN1	0	genome.wustl.edu	37	15	33096524	33096524	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	15	33096524	33096524	T	A	SNP	FMN1	ENST00000334528	human	ensembl	74_37	-1	known	missense	c.3269	p.E1090V	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,smart_FH2_Formin,prints_Formin_Cappuccino_subfam	-	no_errors	FMN1	HGNC	ENSG00000248905	tier1	-	-	67	0	0.00	31	6	16.22
FMN1	0	genome.wustl.edu	37	15	33096525	33096525	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	15	33096525	33096525	C	A	SNP	FMN1	ENST00000334528	human	ensembl	74_37	-1	known	nonsense	c.3268	p.E1090*	1.000	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,smart_FH2_Formin,prints_Formin_Cappuccino_subfam	-	no_errors	FMN1	HGNC	ENSG00000248905	tier1	-	-	67	0	0.00	31	6	16.22
FREM3	0	genome.wustl.edu	37	4	144620474	144620474	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	4	144620474	144620474	G	T	SNP	FREM3	ENST00000329798	human	ensembl	74_37	-1	putative	missense	c.1355	p.S452Y	1.000	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM3	HGNC	ENSG00000183090				100	0	0.00	72	4	5.26
FSTL5	0	genome.wustl.edu	37	4	162680564	162680564	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	4	162680564	162680564	G	C	SNP	FSTL5	ENST00000306100	human	ensembl	74_37	-1	known	missense	c.726	p.F242L	1.000	NULL	pfam_Ig_I-set,pfam_Kazal_dom,pfam_Ig_V-set,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL5	HGNC	ENSG00000168843	tier1	-	-	38	0	0.00	33	11	25.00
GFM1	0	genome.wustl.edu	37	3	158363966	158363966	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	3	158363966	158363966	G	C	SNP	GFM1	ENST00000486715	human	ensembl	74_37	+1	known	missense	c.247	p.D83H	1.000	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,tigrfam_Transl_elong_EFG/EF2,tigrfam_Small_GTP-bd_dom	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFG/EF2_IV,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Transl_B-barrel,superfamily_EFG_III-V,smart_Transl_elong_EFG/EF2_IV,smart_EFG_V,prints_EF_GTP-bd_dom,tigrfam_Transl_elong_EFG/EF2,tigrfam_Small_GTP-bd_dom	-	no_errors	GFM1	HGNC	ENSG00000168827	tier1	-	-	95	0	0.00	103	36	25.90
GPR112	0	genome.wustl.edu	37	X	135429365	135429365	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	X	135429365	135429365	C	T	SNP	GPR112	ENST00000370652	human	ensembl	74_37	+1	known	missense	c.3500	p.T1167I	0.000	NULL	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	-	no_errors	GPR112	HGNC	ENSG00000156920	tier1	-	-	38	0	0.00	31	7	18.42
GPR89A	0	genome.wustl.edu	37	1	145811926	145811927	+	Frame_Shift_Ins	INS	-	-	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	145811926	145811927	-	A	INS	GPR89A	ENST00000313835	human	ensembl	74_37	-1	known	frame_shift_ins	c.283_282	p.G94fs	1.000:1.000	NULL	pfam_ABA_GPCR_dom,pfam_Golgi_pH-regulator_cons_dom	-	no_errors	GPR89A	HGNC	ENSG00000117262	tier1			29	0	0.00	35	12	25.53
GTF2F1	0	genome.wustl.edu	37	19	6380476	6380476	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	6380476	6380476	T	G	SNP	GTF2F1	ENST00000394456	human	ensembl	74_37	-1	known	missense	c.1370	p.D457A	0.994	pfam_TFIIF-alpha	pfam_TFIIF-alpha,superfamily_TFIIF_interaction	-	no_errors	GTF2F1	HGNC	ENSG00000125651	tier1	-	-	138	0	0.00	67	48	41.74
GTF3C1	0	genome.wustl.edu	37	16	27481557	27481557	+	Silent	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	16	27481557	27481557	G	A	SNP	GTF3C1	ENST00000356183	human	ensembl	74_37	-1	known	silent	c.4686	p.D1562	0.955	NULL	pfam_TFIIIC_Bblock-bd	-	no_errors	GTF3C1	HGNC	ENSG00000077235	tier1	-	-	63	0	0.00	52	23	30.67
HAUS5	0	genome.wustl.edu	37	19	36110935	36110935	+	Silent	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	36110935	36110935	C	A	SNP	HAUS5	ENST00000203166	human	ensembl	74_37	+1	known	silent	c.1428	p.V476	0.696	NULL	NULL	-	no_errors	HAUS5	HGNC	ENSG00000249115				70	0	0.00	51	3	5.56
HDAC4	0	genome.wustl.edu	37	2	239975285	239975285	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	239975285	239975285	C	G	SNP	HDAC4	ENST00000345617	human	ensembl	74_37	-1	known	missense	c.3086	p.R1029P	1.000	pfam_Arb2_domain,pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pfam_Arb2_domain,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC4	HGNC	ENSG00000068024	tier1	-	-	103	0	0.00	50	48	48.98
HEATR6	0	genome.wustl.edu	37	17	58153567	58153567	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	17	58153567	58153567	C	A	SNP	HEATR6	ENST00000184956	human	ensembl	74_37	-1	known	missense	c.251	p.R84L	0.988	NULL	superfamily_ARM-type_fold	-	no_errors	HEATR6	HGNC	ENSG00000068097	tier1	-	-	25	0	0.00	12	15	55.56
HEYL	0	genome.wustl.edu	37	1	40092514	40092514	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	40092514	40092514	G	A	SNP	HEYL	ENST00000372852	human	ensembl	74_37	-1	known	nonsense	c.652	p.R218*	0.066	NULL	pfam_bHLH_dom,pfam_Orange,superfamily_bHLH_dom,smart_bHLH_dom,smart_Orange_subgr,pfscan_Orange,pfscan_bHLH_dom	-	no_errors	HEYL	HGNC	ENSG00000163909	tier1	-	-	71	0	0.00	39	28	41.79
HIBCH	0	genome.wustl.edu	37	2	191161574	191161574	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	191161574	191161574	G	A	SNP	HIBCH	ENST00000359678	human	ensembl	74_37	-1	known	missense	c.184	p.L62F	0.148	pfam_Crotonase_core_superfam	pfam_Crotonase_core_superfam	-	no_errors	HIBCH	HGNC	ENSG00000198130	tier1	-	-	87	0	0.00	60	15	20.00
HIST1H3B	0	genome.wustl.edu	37	6	26031889	26031889	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	6	26031889	26031889	C	G	SNP	HIST1H3B	ENST00000244661	human	ensembl	74_37	-1	known	missense	c.400	p.E134Q	1.000	superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST1H3B	HGNC	ENSG00000124693	tier1	-	-	61	0	0.00	35	12	25.53
HMCN1	0	genome.wustl.edu	37	1	186106700	186106700	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	186106700	186106700	G	C	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.13653	p.K4551N	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	44	0	0.00	34	4	10.53
HNRNPA0	0	genome.wustl.edu	37	5	137089438	137089438	+	Silent	SNP	T	T	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	5	137089438	137089438	T	C	SNP	HNRNPA0	ENST00000314940	human	ensembl	74_37	-1	known	silent	c.318	p.K106	0.824	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPA0	HGNC	ENSG00000177733	tier1	-	-	26	0	0.00	15	18	54.55
HYDIN	0	genome.wustl.edu	37	16	70841857	70841857	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	16	70841857	70841857	C	T	SNP	HYDIN	ENST00000393567	human	ensembl	74_37	-1	putative	missense	c.14992	p.E4998K	0.999	NULL	superfamily_P-loop_NTPase,superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	58	0	0.00	18	18	50.00
IGFL2	0	genome.wustl.edu	37	19	46664041	46664041	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	46664041	46664041	G	C	SNP	IGFL2	ENST00000434646	human	ensembl	74_37	+1	known	missense	c.277	p.D93H	0.000	NULL	NULL	-	no_errors	IGFL2	HGNC	ENSG00000204866	tier1	-	-	79	0	0.00	51	28	35.44
IL1B	0	genome.wustl.edu	37	2	113593181	113593181	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	113593181	113593181	C	T	SNP	IL1B	ENST00000263341	human	ensembl	74_37	-1	known	missense	c.61	p.D21N	0.097	pfam_IL-1_propep,prints_IL-1_beta	pfam_IL-1,pfam_IL-1_propep,superfamily_Cytokine_IL1-like,smart_IL-1,prints_IL-1_beta,prints_IL-1_alpha/beta,prints_IL-1,prints_IL-1_fam/FGF_fam,prints_IL-1RA/IL-36	-	no_errors	IL1B	HGNC	ENSG00000125538	tier1	-	-	72	0	0.00	21	21	50.00
IL1B	0	genome.wustl.edu	37	2	113593774	113593774	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	113593774	113593774	C	T	SNP	IL1B	ENST00000263341	human	ensembl	74_37	-1	known	missense	c.33	p.M11I	0.003	pfam_IL-1_propep	pfam_IL-1,pfam_IL-1_propep,superfamily_Cytokine_IL1-like,smart_IL-1,prints_IL-1_beta,prints_IL-1_alpha/beta,prints_IL-1,prints_IL-1_fam/FGF_fam,prints_IL-1RA/IL-36	-	no_errors	IL1B	HGNC	ENSG00000125538	tier1	-	-	33	0	0.00	13	10	43.48
INGX	0	genome.wustl.edu	37	X	70712092	70712092	+	RNA	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	X	70712092	70712092	G	C	SNP	INGX	ENST00000489074	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	INGX	HGNC	ENSG00000243468	tier1	-	-	27	0	0.00	14	8	36.36
ISM1	0	genome.wustl.edu	37	20	13280008	13280009	+	Frame_Shift_Ins	INS	-	-	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	20	13280008	13280009	-	A	INS	ISM1	ENST00000262487	human	ensembl	74_37	+1	known	frame_shift_ins	c.1297_1298	p.Y433fs	1.000:1.000	pfam_AMOP,smart_AMOP,pfscan_AMOP	pfam_AMOP,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_AMOP,pfscan_AMOP,pfscan_Thrombospondin_1_rpt	-	no_errors	ISM1	HGNC	ENSG00000101230	tier1			25	0	0.00	6	5	45.45
JUP	0	genome.wustl.edu	37	17	39921275	39921275	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	17	39921275	39921275	G	C	SNP	JUP	ENST00000310706	human	ensembl	74_37	-1	known	missense	c.954	p.I318M	1.000	superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,prints_Beta-catenin	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,prints_Beta-catenin	-	no_errors	JUP	HGNC	ENSG00000173801				27	0	0.00	27	3	10.00
KATNBL1P6	0	genome.wustl.edu	37	6	147123814	147123815	+	RNA	INS	-	-	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	6	147123814	147123815	-	A	INS	KATNBL1P6	ENST00000562413	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.020:0.033	-	-	-	no_errors	KATNBL1P6	HGNC	ENSG00000228283	tier1			57	0	0.00	26	5	16.13
KCNA4	0	genome.wustl.edu	37	11	30034490	30034490	+	RNA	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	11	30034490	30034490	C	T	SNP	KCNA4	ENST00000526518	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.029	-	-	-	no_errors	KCNA4	HGNC	ENSG00000182255	tier1	-	-	47	0	0.00	14	14	50.00
KIAA0947	0	genome.wustl.edu	37	5	5465103	5465103	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	5	5465103	5465103	G	T	SNP	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	nonsense	c.5656	p.E1886*	0.011	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151	tier1	-	-	33	0	0.00	42	5	10.64
KIAA0947	0	genome.wustl.edu	37	5	5473686	5473686	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	5	5473686	5473686	G	A	SNP	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	missense	c.6238	p.V2080I	1.000	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151	tier1	-	-	29	0	0.00	51	7	12.07
KIF2C	0	genome.wustl.edu	37	1	45228229	45228229	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	45228229	45228229	G	C	SNP	KIF2C	ENST00000372224	human	ensembl	74_37	+1	known	missense	c.1870	p.E624Q	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2C	HGNC	ENSG00000142945	tier1	-	-	33	0	0.00	22	6	21.43
KPNA3	0	genome.wustl.edu	37	13	50366638	50366638	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	13	50366638	50366638	G	T	SNP	KPNA3	ENST00000261667	human	ensembl	74_37	-1	known	missense	c.5	p.A2D	1.000	pfscan_Importin-a_IBB	pfam_Armadillo,pfam_Importin-a_IBB,pfam_HEAT,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA3	HGNC	ENSG00000102753	tier1	-	-	61	0	0.00	42	4	8.70
KRTAP5-5	0	genome.wustl.edu	37	11	1651712	1651712	+	Silent	SNP	A	A	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	11	1651712	1651712	A	G	SNP	KRTAP5-5	ENST00000399676	human	ensembl	74_37	+1	known	silent	c.642	p.Q214	0.996	NULL	NULL	-	no_errors	KRTAP5-5	HGNC	ENSG00000185940	tier1	-	-	179	0	0.00	132	16	10.81
KRTAP5-5	0	genome.wustl.edu	37	11	1651723	1651723	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	11	1651723	1651723	A	G	SNP	KRTAP5-5	ENST00000399676	human	ensembl	74_37	+1	known	missense	c.653	p.Y218C	0.999	NULL	NULL	-	no_errors	KRTAP5-5	HGNC	ENSG00000185940	tier1	-	-	182	0	0.00	138	17	10.97
KRTAP5-5	0	genome.wustl.edu	37	11	1651724	1651724	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	11	1651724	1651724	C	T	SNP	KRTAP5-5	ENST00000399676	human	ensembl	74_37	+1	known	silent	c.654	p.Y218	0.999	NULL	NULL	-	no_errors	KRTAP5-5	HGNC	ENSG00000185940	tier1	-	-	180	0	0.00	140	16	10.26
KTN1	0	genome.wustl.edu	37	14	56120290	56120290	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	14	56120290	56120290	C	T	SNP	KTN1	ENST00000395309	human	ensembl	74_37	+1	known	missense	c.2777	p.S926L	1.000	NULL	NULL	-	no_errors	KTN1	HGNC	ENSG00000126777	tier1	-	-	29	0	0.00	16	7	30.43
LEPR	0	genome.wustl.edu	37	1	66075661	66075661	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	66075661	66075661	C	T	SNP	LEPR	ENST00000349533	human	ensembl	74_37	+1	known	missense	c.1784	p.S595F	0.121	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_IgC2-like_lig-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LEPR	HGNC	ENSG00000116678	tier1	-	-	86	0	0.00	37	36	49.32
LILRA5	0	genome.wustl.edu	37	19	54823234	54823234	+	Silent	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	54823234	54823234	G	T	SNP	LILRA5	ENST00000301219	human	ensembl	74_37	-1	known	silent	c.309	p.I103	0.000	smart_Ig_sub,smart_Ig_sub2	smart_Ig_sub,smart_Ig_sub2	-	no_errors	LILRA5	HGNC	ENSG00000187116	tier1	-	-	71	0	0.00	50	5	9.09
LLGL1	0	genome.wustl.edu	37	17	18133339	18133339	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	17	18133339	18133339	G	A	SNP	LLGL1	ENST00000316843	human	ensembl	74_37	+1	known	missense	c.166	p.G56R	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_LLGL2,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,prints_Lethal2_giant	-	no_errors	LLGL1	HGNC	ENSG00000131899	tier1	-	-	68	0	0.00	17	31	64.58
LYG1	0	genome.wustl.edu	37	2	99912118	99912118	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	99912118	99912118	G	T	SNP	LYG1	ENST00000308528	human	ensembl	74_37	-1	known	missense	c.16	p.L6M	1.000	pirsf_Glyco_hydro_23	superfamily_Lysozyme-like_dom,pirsf_Glyco_hydro_23,prints_Glyco_hydro_23	-	no_errors	LYG1	HGNC	ENSG00000144214				36	0	0.00	37	2	5.13
LYST	0	genome.wustl.edu	37	1	235922855	235922855	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	235922855	235922855	T	C	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	missense	c.6298	p.M2100V	0.005	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669	tier1	-	-	21	0	0.00	23	6	20.69
MALAT1	0	genome.wustl.edu	37	11	65266086	65266086	+	RNA	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	11	65266086	65266086	G	T	SNP	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562	tier1	-	-	33	0	0.00	18	3	14.29
MAP3K5	0	genome.wustl.edu	37	6	137019722	137019722	+	Silent	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	6	137019722	137019722	G	A	SNP	MAP3K5	ENST00000359015	human	ensembl	74_37	-1	known	silent	c.711	p.L237	0.997	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_SAM/pointed,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MAP3K5	HGNC	ENSG00000197442	tier1	-	-	30	0	0.00	17	20	54.05
MED1	0	genome.wustl.edu	37	17	37566025	37566025	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	17	37566025	37566025	G	A	SNP	MED1	ENST00000300651	human	ensembl	74_37	-1	known	nonsense	c.2449	p.Q817*	1.000	NULL	pfam_Mediator_Med1_met/fun	-	no_errors	MED1	HGNC	ENSG00000125686	tier1	-	-	70	0	0.00	37	11	22.92
MORC1	0	genome.wustl.edu	37	3	108776315	108776315	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	3	108776315	108776315	T	G	SNP	MORC1	ENST00000232603	human	ensembl	74_37	-1	known	missense	c.1050	p.R350S	0.999	NULL	pfam_Znf_CW,superfamily_HATPase_ATP-bd,pfscan_Znf_CW	-	no_errors	MORC1	HGNC	ENSG00000114487				23	0	0.00	20	4	16.67
MPC1	0	genome.wustl.edu	37	6	166778737	166778737	+	RNA	SNP	T	T	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	6	166778737	166778737	T	C	SNP	MPC1	ENST00000487218	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	MPC1	HGNC	ENSG00000060762	tier1	-	-	35	0	0.00	8	10	55.56
MUC4	0	genome.wustl.edu	37	3	195511236	195511236	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	3	195511236	195511236	G	T	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.7215	p.D2405E	0.492	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	-	-	500	0	0.00	586	55	8.58
MYO7B	0	genome.wustl.edu	37	2	128350402	128350402	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	128350402	128350402	C	T	SNP	MYO7B	ENST00000389524	human	ensembl	74_37	+1	known	nonsense	c.2026	p.R676*	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7B	HGNC	ENSG00000169994	tier1	-	-	83	0	0.00	45	15	25.00
NDN	0	genome.wustl.edu	37	15	23931422	23931422	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	15	23931422	23931422	G	A	SNP	NDN	ENST00000331837	human	ensembl	74_37	-1	known	missense	c.943	p.R315C	0.347	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	NDN	HGNC	ENSG00000182636	tier1	-	-	40	0	0.00	26	9	25.71
NEURL4	0	genome.wustl.edu	37	17	7221920	7221920	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	17	7221920	7221920	G	A	SNP	NEURL4	ENST00000399464	human	ensembl	74_37	-1	known	missense	c.3758	p.S1253F	0.773	pfscan_Neu_Z	pfam_Neu_Z,superfamily_ConA-like_lec_gl_sf,smart_Neu_Z,pfscan_Neu_Z	-	no_errors	NEURL4	HGNC	ENSG00000215041	tier1	-	-	101	0	0.00	46	38	45.24
NFE2L2	0	genome.wustl.edu	37	2	178098810	178098810	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	178098810	178098810	C	G	SNP	NFE2L2	ENST00000397062	human	ensembl	74_37	-1	known	missense	c.235	p.E79Q	1.000	NULL	pfam_bZIP,superfamily_TF_DNA-bd,superfamily_Serpin_dom,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2L2	HGNC	ENSG00000116044	tier1	-	-	132	0	0.00	97	30	23.62
NFXL1	0	genome.wustl.edu	37	4	47900008	47900008	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	4	47900008	47900008	T	-	DEL	NFXL1	ENST00000381538	human	ensembl	74_37	-1	known	frame_shift_del	c.1180	p.R394fs	1.000	NULL	pfam_Znf_NFX1,smart_Znf_NFX1,pfscan_Znf_RING	-	no_errors	NFXL1	HGNC	ENSG00000170448	tier1			14	0	0.00	21	3	12.50
NGEF	0	genome.wustl.edu	37	2	233752783	233752783	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	233752783	233752783	C	T	SNP	NGEF	ENST00000264051	human	ensembl	74_37	-1	known	missense	c.1307	p.R436Q	0.636	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	NGEF	HGNC	ENSG00000066248	tier1	-	-	89	0	0.00	70	23	24.73
NIN	0	genome.wustl.edu	37	14	51224041	51224041	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	14	51224041	51224041	T	A	SNP	NIN	ENST00000245441	human	ensembl	74_37	-1	known	missense	c.3707	p.K1236M	0.052	NULL	superfamily_tRNA-bd_arm,pfscan_EF_hand_dom	-	no_errors	NIN	HGNC	ENSG00000100503	tier1	-	-	30	0	0.00	28	12	30.00
NLRC3	0	genome.wustl.edu	37	16	3593431	3593431	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	16	3593431	3593431	A	G	SNP	NLRC3	ENST00000448023	human	ensembl	74_37	-1	known	missense	c.3071	p.I1024T	1.000	smart_Leu-rich_rpt_RNase_inh_sub-typ	superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase	-	no_errors	NLRC3	HGNC	ENSG00000167984	tier1	-	-	53	0	0.00	37	12	24.49
NSD1	0	genome.wustl.edu	37	5	176719054	176719054	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	5	176719054	176719054	G	T	SNP	NSD1	ENST00000439151	human	ensembl	74_37	+1	known	nonsense	c.6358	p.E2120*	1.000	superfamily_Znf_FYVE_PHD,smart_Znf_PHD	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	NSD1	HGNC	ENSG00000165671	tier1	-	-	47	0	0.00	18	16	47.06
NT5DC2	0	genome.wustl.edu	37	3	52559074	52559074	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	3	52559074	52559074	C	T	SNP	NT5DC2	ENST00000422318	human	ensembl	74_37	-1	known	missense	c.1252	p.E418K	0.999	pfam_HAD-SF_hydro_IG_5-nucl,superfamily_HAD-like_dom,pirsf_Pur_nucleotidase,tigrfam_HAD-SF_hydro_IG_5-nucl	pfam_HAD-SF_hydro_IG_5-nucl,superfamily_HAD-like_dom,pirsf_Pur_nucleotidase,tigrfam_HAD-SF_hydro_IG_5-nucl	-	no_errors	NT5DC2	HGNC	ENSG00000168268	tier1	-	-	13	0	0.00	3	4	57.14
NWD1	0	genome.wustl.edu	37	19	16884031	16884031	+	Silent	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	16884031	16884031	G	A	SNP	NWD1	ENST00000379808	human	ensembl	74_37	+1	known	silent	c.2505	p.Q835	0.916	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NWD1	HGNC	ENSG00000188039	tier1	-	-	55	0	0.00	20	20	50.00
OR1M1	0	genome.wustl.edu	37	19	9204692	9204692	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	9204692	9204692	G	A	SNP	OR1M1	ENST00000429566	human	ensembl	74_37	+1	known	missense	c.772	p.V258I	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1M1	HGNC	ENSG00000170929	tier1	rs144608760	-	47	0	0.00	37	8	17.78
OR2M4	0	genome.wustl.edu	37	1	248402808	248402808	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	248402808	248402808	C	A	SNP	OR2M4	ENST00000306687	human	ensembl	74_37	+1	known	missense	c.578	p.S193Y	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M4	HGNC	ENSG00000171180	tier1	-	-	78	0	0.00	64	26	28.89
PAPLN	0	genome.wustl.edu	37	14	73739372	73739372	+	Nonstop_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	14	73739372	73739372	G	T	SNP	PAPLN	ENST00000427855	human	ensembl	74_37	+1	known	nonstop	c.3837	p.*1279Y	1.000	NULL	pfam_Ig_I-set,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_Prot_inh_Kunz-m,pfam_PLAC,superfamily_Prot_inh_Kunz-m,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Prot_inh_Kunz-m,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Prot_inh_Kunz-m,pfscan_Ig-like_dom,prints_Peptidase_M12B_ADAM-TS,prints_Prot_inh_Kunz-m	-	no_errors	PAPLN	HGNC	ENSG00000100767	tier1	-	-	57	0	0.00	39	4	9.30
PAPPA2	0	genome.wustl.edu	37	1	176564460	176564460	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	176564460	176564460	A	C	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	missense	c.1720	p.N574H	1.000	smart_Notch_dom	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	tier1	-	-	65	0	0.00	38	15	28.30
PARP10	0	genome.wustl.edu	37	8	145057845	145057845	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	8	145057845	145057845	C	A	SNP	PARP10	ENST00000313028	human	ensembl	74_37	-1	known	nonsense	c.1912	p.E638*	0.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP10	HGNC	ENSG00000178685	tier1	-	-	82	0	0.00	55	48	46.60
PARP4	0	genome.wustl.edu	37	13	25058793	25058793	+	Silent	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	13	25058793	25058793	G	A	SNP	PARP4	ENST00000381989	human	ensembl	74_37	-1	known	silent	c.1446	p.L482	0.998	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_VIT,pfam_VWF_A,pfam_BRCT_dom,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_BRCT_dom,smart_BRCT_dom,smart_VIT,smart_VWF_A,pfscan_BRCT_dom,pfscan_VWF_A,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP4	HGNC	ENSG00000102699	tier1	-	-	89	0	0.00	64	23	26.44
PCCB	0	genome.wustl.edu	37	3	136045208	136045208	+	Silent	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	3	136045208	136045208	G	A	SNP	PCCB	ENST00000466072	human	ensembl	74_37	+1	putative	silent	c.1131	p.Q377	0.000	pfam_Carboxyl_trans,pfscan_COA_CT_C	pfam_Carboxyl_trans,pfscan_COA_CT_N,pfscan_COA_CT_C	-	no_errors	PCCB	HGNC	ENSG00000114054	tier1	-	-	107	0	0.00	38	45	54.22
PCDHGA7	0	genome.wustl.edu	37	5	140764474	140764474	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	5	140764474	140764474	G	A	SNP	PCDHGA7	ENST00000518325	human	ensembl	74_37	+1	known	missense	c.2008	p.E670K	0.689	pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA7	HGNC	ENSG00000253537	tier1	-	-	109	0	0.00	27	36	57.14
PDCL	0	genome.wustl.edu	37	9	125582567	125582567	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	9	125582567	125582567	C	A	SNP	PDCL	ENST00000259467	human	ensembl	74_37	-1	known	missense	c.703	p.A235S	1.000	pfam_Phosducin_thioredoxin-like_dom,superfamily_Thioredoxin-like_fold,prints_Phosducin	pfam_Phosducin_thioredoxin-like_dom,superfamily_Thioredoxin-like_fold,prints_Phosducin	-	no_errors	PDCL	HGNC	ENSG00000136940	tier1	-	-	35	0	0.00	24	5	17.24
PDLIM5	0	genome.wustl.edu	37	4	95497125	95497125	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	4	95497125	95497125	C	T	SNP	PDLIM5	ENST00000317968	human	ensembl	74_37	+1	known	missense	c.650	p.S217F	1.000	NULL	pfam_Znf_LIM,pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	PDLIM5	HGNC	ENSG00000163110	tier1	-	-	36	0	0.00	21	6	22.22
PIGW	0	genome.wustl.edu	37	17	34893992	34893992	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	17	34893992	34893992	A	G	SNP	PIGW	ENST00000328396	human	ensembl	74_37	+1	known	missense	c.1042	p.I348V	0.001	pfam_GWT1,pirsf_GWT1	pfam_GWT1,pirsf_GWT1	-	no_errors	PIGW	HGNC	ENSG00000184886				43	0	0.00	29	8	21.62
PLBD1	0	genome.wustl.edu	37	12	14659951	14659951	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	12	14659951	14659951	A	C	SNP	PLBD1	ENST00000240617	human	ensembl	74_37	-1	known	missense	c.1288	p.L430V	0.963	pfam_PLipase_B-like	pfam_PLipase_B-like	-	no_errors	PLBD1	HGNC	ENSG00000121316	tier1	-	-	35	0	0.00	49	9	15.52
PLEKHA8	0	genome.wustl.edu	37	7	30118277	30118277	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	7	30118277	30118277	G	C	SNP	PLEKHA8	ENST00000449726	human	ensembl	74_37	+1	known	missense	c.1434	p.Q478H	1.000	superfamily_Glycolipid_transfer_prot_dom	pfam_Glycolipid_transfer_prot_dom,pfam_Pleckstrin_homology,superfamily_Glycolipid_transfer_prot_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHA8	HGNC	ENSG00000106086	tier1	-	-	91	0	0.00	138	33	19.19
PLEKHN1	0	genome.wustl.edu	37	1	908636	908636	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	908636	908636	G	A	SNP	PLEKHN1	ENST00000379409	human	ensembl	74_37	+1	known	missense	c.1379	p.R460Q	0.000	NULL	smart_Pleckstrin_homology	-	no_errors	PLEKHN1	HGNC	ENSG00000187583	tier1	-	-	52	0	0.00	19	6	24.00
PLSCR2	0	genome.wustl.edu	37	3	146213729	146213729	+	RNA	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	3	146213729	146213729	C	G	SNP	PLSCR2	ENST00000474418	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.011	-	-	-	no_errors	PLSCR2	HGNC	ENSG00000163746	tier1	-	-	41	0	0.00	21	6	22.22
PMS2	0	genome.wustl.edu	37	7	6026532	6026532	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	7	6026532	6026532	T	A	SNP	PMS2	ENST00000265849	human	ensembl	74_37	-1	known	missense	c.1864	p.M622L	0.165	NULL	pfam_MutL_C,pfam_DNA_mismatch_repair_C,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_MutL_C,tigrfam_DNA_mismatch_repair_N	-	no_errors	PMS2	HGNC	ENSG00000122512	tier1	-	-	66	0	0.00	35	54	60.67
POLB	0	genome.wustl.edu	37	8	42196087	42196087	+	RNA	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	8	42196087	42196087	G	C	SNP	POLB	ENST00000530566	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	POLB	HGNC	ENSG00000070501	tier1	-	-	114	0	0.00	43	31	41.89
POTEB2	0	genome.wustl.edu	37	15	21071350	21071350	+	Silent	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	15	21071350	21071350	G	A	SNP	POTEB2	ENST00000454856	human	ensembl	74_37	-1	known	silent	c.261	p.D87	0.001	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEB2	HGNC	ENSG00000230031	tier1	-	-	82	0	0.00	64	10	13.33
PPOX	0	genome.wustl.edu	37	1	161140351	161140352	+	RNA	INS	-	-	TCCT			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	161140351	161140352	-	TCCT	INS	PPOX	ENST00000466452	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	PPOX	HGNC	ENSG00000143224	tier1			80	0	0.00	36	20	35.71
PRB4	0	genome.wustl.edu	37	12	11461530	11461530	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	12	11461530	11461530	G	T	SNP	PRB4	ENST00000279575	human	ensembl	74_37	-1	known	missense	c.387	p.N129K	0.000	NULL	NULL	-	no_errors	PRB4	HGNC	ENSG00000230657	tier1	-	-	109	0	0.00	144	23	13.77
PSG2	0	genome.wustl.edu	37	19	43579505	43579505	+	Splice_Site	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	43579505	43579505	C	A	SNP	PSG2	ENST00000406487	human	ensembl	74_37	-1	known	splice_site	c.709+1	e3+1	0.048	-	-	-	no_errors	PSG2	HGNC	ENSG00000242221	tier1	-	-	231	0	0.00	184	44	19.30
PSMC4	0	genome.wustl.edu	37	19	40487135	40487135	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	40487135	40487135	G	T	SNP	PSMC4	ENST00000157812	human	ensembl	74_37	+1	known	missense	c.1180	p.V394F	1.000	superfamily_P-loop_NTPase,tigrfam_26S_Psome_P45	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC4	HGNC	ENSG00000013275	tier1	-	-	36	0	0.00	32	4	11.11
PSMD11	0	genome.wustl.edu	37	17	30807535	30807535	+	Silent	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	17	30807535	30807535	G	C	SNP	PSMD11	ENST00000261712	human	ensembl	74_37	+1	known	silent	c.1155	p.L385	1.000	pfam_PCI_dom,smart_PCI_dom	pfam_PCI_dom,smart_PAM,smart_PCI_dom	-	no_errors	PSMD11	HGNC	ENSG00000108671	tier1	-	-	49	0	0.00	26	7	21.21
PTEN	0	genome.wustl.edu	37	10	89712008	89712008	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	10	89712008	89712008	G	C	SNP	PTEN	ENST00000371953	human	ensembl	74_37	+1	known	missense	c.626	p.G209A	1.000	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tensin_phosphatase_C2-dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_C2_dom,smart_Tyr_Pase_cat,pirsf_Bifunc_PIno_P3_Pase/Pase_PTEN,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	PTEN	HGNC	ENSG00000171862				19	0	0.00	12	4	25.00
PTGER2	0	genome.wustl.edu	37	14	52782053	52782053	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	14	52782053	52782053	C	G	SNP	PTGER2	ENST00000245457	human	ensembl	74_37	+1	known	missense	c.787	p.L263V	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Prostglndn_EP2_rcpt,prints_Prostanoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	PTGER2	HGNC	ENSG00000125384	tier1	-	-	32	0	0.00	25	8	24.24
PTPLB	0	genome.wustl.edu	37	3	123301073	123301073	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	3	123301073	123301073	C	T	SNP	PTPLB	ENST00000383657	human	ensembl	74_37	-1	known	missense	c.259	p.G87R	1.000	pfam_Tyr_Pase-like_PTPLA	pfam_Tyr_Pase-like_PTPLA	-	no_errors	PTPLB	HGNC	ENSG00000206527	tier1	-	-	19	0	0.00	15	6	28.57
PTPRO	0	genome.wustl.edu	37	12	15739974	15739974	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	12	15739974	15739974	C	T	SNP	PTPRO	ENST00000281171	human	ensembl	74_37	+1	known	silent	c.3399	p.I1133	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRO	HGNC	ENSG00000151490	tier1	-	-	44	0	0.00	25	7	21.88
PTPRT	0	genome.wustl.edu	37	20	41419957	41419957	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	20	41419957	41419957	C	T	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	missense	c.364	p.V122I	1.000	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090	tier1	-	-	39	0	0.00	38	4	9.52
PYGO2	0	genome.wustl.edu	37	1	154932041	154932041	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	154932041	154932041	G	C	SNP	PYGO2	ENST00000368457	human	ensembl	74_37	-1	known	missense	c.435	p.F145L	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PYGO2	HGNC	ENSG00000163348				22	0	0.00	13	2	13.33
RABIF	0	genome.wustl.edu	37	1	202858168	202858168	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	202858168	202858168	G	A	SNP	RABIF	ENST00000367262	human	ensembl	74_37	-1	known	missense	c.59	p.A20V	1.000	pfam_Mss4,superfamily_Mss4-like	pfam_Mss4,superfamily_Mss4-like	-	no_errors	RABIF	HGNC	ENSG00000183155	tier1	-	-	21	0	0.00	13	8	38.10
RBM4	0	genome.wustl.edu	37	11	66407231	66407231	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	11	66407231	66407231	G	C	SNP	RBM4	ENST00000310092	human	ensembl	74_37	+1	known	missense	c.49	p.E17Q	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,pfam_Znf_CCHC,smart_RRM_dom,smart_Znf_CCHC,pfscan_Znf_CCHC,pfscan_RRM_dom	-	no_errors	RBM4	HGNC	ENSG00000173933	tier1	-	-	133	0	0.00	61	42	40.78
RFFL	0	genome.wustl.edu	37	17	33348699	33348699	+	Silent	SNP	T	T	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	17	33348699	33348699	T	C	SNP	RFFL	ENST00000315249	human	ensembl	74_37	-1	known	silent	c.282	p.T94	1.000	superfamily_Znf_FYVE_PHD	superfamily_Znf_FYVE_PHD,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RFFL	HGNC	ENSG00000092871	tier1	-	-	44	0	0.00	8	5	38.46
RFPL4AL1	0	genome.wustl.edu	37	19	56283325	56283325	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	56283325	56283325	G	T	SNP	RFPL4AL1	ENST00000341750	human	ensembl	74_37	+1	novel	missense	c.155	p.C52F	0.037	pfam_RDM_domain_RFPL,pfscan_Znf_RING	pfam_RDM_domain_RFPL,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	RFPL4AL1	HGNC	ENSG00000229292	tier1	-	-	20	0	0.00	7	7	50.00
RFPL4AL1	0	genome.wustl.edu	37	19	56283981	56283981	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	56283981	56283981	C	G	SNP	RFPL4AL1	ENST00000341750	human	ensembl	74_37	+1	novel	missense	c.300	p.F100L	0.343	superfamily_ConA-like_lec_gl_sf,smart_PRY,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_RDM_domain_RFPL,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	RFPL4AL1	HGNC	ENSG00000229292	tier1	-	-	28	0	0.00	13	23	63.89
RFX3	0	genome.wustl.edu	37	9	3395586	3395586	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	9	3395586	3395586	C	G	SNP	RFX3	ENST00000382004	human	ensembl	74_37	-1	known	missense	c.3	p.M1I	1.000	pfam_RFX1_trans_act	pfam_RFX1_trans_act,pfam_DNA-bd_RFX	-	no_errors	RFX3	HGNC	ENSG00000080298	tier1	-	-	47	0	0.00	31	12	27.91
RNF17	0	genome.wustl.edu	37	13	25418011	25418011	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	13	25418011	25418011	G	T	SNP	RNF17	ENST00000255324	human	ensembl	74_37	+1	known	missense	c.2733	p.Q911H	0.827	NULL	pfam_Tudor,smart_Tudor,pfscan_Tudor,pfscan_Znf_RING	-	no_errors	RNF17	HGNC	ENSG00000132972	tier1	-	-	59	0	0.00	53	4	7.02
RNF6	0	genome.wustl.edu	37	13	26788056	26788056	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	13	26788056	26788056	G	C	SNP	RNF6	ENST00000346166	human	ensembl	74_37	-1	known	missense	c.1963	p.H655D	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF6	HGNC	ENSG00000127870	tier1	-	-	33	0	0.00	9	13	59.09
RNPC3	0	genome.wustl.edu	37	1	104087666	104087666	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	104087666	104087666	A	C	SNP	RNPC3	ENST00000423855	human	ensembl	74_37	+1	known	missense	c.1149	p.E383D	0.991	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RNPC3	HGNC	ENSG00000185946	tier1	-	-	54	0	0.00	34	8	19.05
ROBO2	0	genome.wustl.edu	37	3	77681778	77681778	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	3	77681778	77681778	G	A	SNP	ROBO2	ENST00000332191	human	ensembl	74_37	+1	novel	missense	c.3914	p.R1305K	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	ROBO2	HGNC	ENSG00000185008				50	0	0.00	25	7	21.88
RPS6KA5	0	genome.wustl.edu	37	14	91341668	91341668	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	14	91341668	91341668	G	C	SNP	RPS6KA5	ENST00000261991	human	ensembl	74_37	-1	known	missense	c.1873	p.H625D	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_Aminoglycoside_PTrfase,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_AGC-kinase_C,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	-	no_errors	RPS6KA5	HGNC	ENSG00000100784	tier1	-	-	32	0	0.00	23	12	34.29
RTL1	0	genome.wustl.edu	37	14	101347784	101347784	+	Silent	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	14	101347784	101347784	C	A	SNP	RTL1	ENST00000534062	human	ensembl	74_37	-1	known	silent	c.3342	p.R1114	0.000	NULL	pfam_Retrotrans_gag_dom,superfamily_Peptidase_aspartic_dom	-	no_errors	RTL1	HGNC	ENSG00000254656	tier1	-	-	55	0	0.00	38	11	22.45
RYR2	0	genome.wustl.edu	37	1	237863703	237863703	+	Silent	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	237863703	237863703	G	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	silent	c.9297	p.L3099	0.990	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	54	0	0.00	53	14	20.90
SACS	0	genome.wustl.edu	37	13	23914586	23914586	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	13	23914586	23914586	T	A	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.3429	p.Q1143H	0.975	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	tier1	-	-	27	0	0.00	27	13	32.50
SATB2	0	genome.wustl.edu	37	2	200246514	200246514	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	200246514	200246514	G	C	SNP	SATB2	ENST00000260926	human	ensembl	74_37	-1	known	missense	c.376	p.L126V	1.000	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	SATB2	HGNC	ENSG00000119042	tier1	-	-	40	0	0.00	24	5	17.24
SDHAF2	0	genome.wustl.edu	37	11	61205246	61205246	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	11	61205246	61205246	C	T	SNP	SDHAF2	ENST00000301761	human	ensembl	74_37	+1	known	silent	c.186	p.S62	0.996	superfamily_SDH	pfam_SDH,superfamily_SDH	-	no_errors	SDHAF2	HGNC	ENSG00000167985				12	0	0.00	10	7	41.18
SEMA4B	0	genome.wustl.edu	37	15	90768989	90768989	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	15	90768989	90768989	G	T	SNP	SEMA4B	ENST00000332496	human	ensembl	74_37	+1	known	missense	c.1618	p.D540Y	1.000	pfam_Plexin_repeat,superfamily_Plexin-like_fold,smart_Plexin-like_fold	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA4B	HGNC	ENSG00000185033	tier1	-	-	85	0	0.00	62	31	33.33
SERINC3	0	genome.wustl.edu	37	20	43135470	43135470	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	20	43135470	43135470	G	A	SNP	SERINC3	ENST00000255175	human	ensembl	74_37	-1	known	nonsense	c.781	p.Q261*	1.000	pfam_TMS_TDE	pfam_TMS_TDE	-	no_errors	SERINC3	HGNC	ENSG00000132824	tier1	-	-	33	0	0.00	13	8	38.10
SERTAD3	0	genome.wustl.edu	37	19	40947559	40947559	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	40947559	40947559	C	T	SNP	SERTAD3	ENST00000322354	human	ensembl	74_37	-1	known	silent	c.429	p.G143	0.365	NULL	pfam_SERTA,pfscan_SERTA	-	no_errors	SERTAD3	HGNC	ENSG00000167565	tier1	-	-	64	0	0.00	28	17	37.78
SETD7	0	genome.wustl.edu	37	4	140454373	140454373	+	Silent	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	4	140454373	140454373	G	A	SNP	SETD7	ENST00000274031	human	ensembl	74_37	-1	known	silent	c.318	p.F106	1.000	pfam_MORN,pirsf_Hist-Lys_N-MeTrfase_SET	pfam_MORN,pfam_SET_dom,smart_SET_dom,pirsf_Hist-Lys_N-MeTrfase_SET,pfscan_SET_dom	-	no_errors	SETD7	HGNC	ENSG00000145391	tier1	-	-	124	0	0.00	58	47	44.76
SGIP1	0	genome.wustl.edu	37	1	67147594	67147594	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	67147594	67147594	C	A	SNP	SGIP1	ENST00000237247	human	ensembl	74_37	+1	known	missense	c.869	p.P290Q	1.000	NULL	pfam_Muniscin_C-term_mu_dom,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C	-	no_errors	SGIP1	HGNC	ENSG00000118473	tier1	-	-	50	0	0.00	25	11	30.56
SIGLEC6	0	genome.wustl.edu	37	19	52032987	52032987	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	52032987	52032987	A	G	SNP	SIGLEC6	ENST00000425629	human	ensembl	74_37	-1	known	missense	c.1003	p.F335L	0.044	pfam_Ig_I-set,smart_Ig_sub	pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC6	HGNC	ENSG00000105492	tier1	-	-	73	0	0.00	28	17	37.78
SLC12A7	0	genome.wustl.edu	37	5	1079523	1079523	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	5	1079523	1079523	C	T	SNP	SLC12A7	ENST00000264930	human	ensembl	74_37	-1	known	silent	c.1386	p.T462	0.949	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A7	HGNC	ENSG00000113504	tier1	-	-	38	0	0.00	64	8	11.11
SLC35E2B	0	genome.wustl.edu	37	1	1601102	1601102	+	Splice_Site	DEL	C	C	-			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	1601102	1601102	C	-	DEL	SLC35E2B	ENST00000234800	human	ensembl	74_37	-1	known	splice_site_del	c.834+1	e6+1	1.000	-	-	-	no_errors	SLC35E2B	HGNC	ENSG00000189339	tier1			54	0	0.00	33	9	21.43
SNX13	0	genome.wustl.edu	37	7	17931220	17931220	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	7	17931220	17931220	C	G	SNP	SNX13	ENST00000428135	human	ensembl	74_37	-1	known	missense	c.267	p.K89N	1.000	NULL	pfam_Phox_assoc,pfam_Sorting_nexin_C,pfam_Phox,pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,superfamily_Phox,superfamily_Cyt_c_oxidase_su5A/6,smart_PX_assoc_Snx13,smart_Regulat_G_prot_signal_superfam,smart_Phox,pfscan_Phox,pfscan_Phox_assoc,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	SNX13	HGNC	ENSG00000071189				12	0	0.00	13	3	18.75
SPATA31A6	0	genome.wustl.edu	37	9	43628235	43628235	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	9	43628235	43628235	G	A	SNP	SPATA31A6	ENST00000332857	human	ensembl	74_37	-1	known	missense	c.452	p.P151L	0.000	NULL	NULL	-	no_errors	SPATA31A6	HGNC	ENSG00000185775	tier1	rs199884594	-	18	0	0.00	1	2	66.67
SRRM1	0	genome.wustl.edu	37	1	24993374	24993374	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	24993374	24993374	C	A	SNP	SRRM1	ENST00000447431	human	ensembl	74_37	+1	known	missense	c.1733	p.P578H	1.000	NULL	pfam_PWI_dom,superfamily_PWI_dom,smart_PWI_dom	-	no_errors	SRRM1	HGNC	ENSG00000133226				53	0	0.00	55	3	5.17
SRRM1	0	genome.wustl.edu	37	1	24993386	24993386	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	24993386	24993386	G	T	SNP	SRRM1	ENST00000447431	human	ensembl	74_37	+1	known	missense	c.1745	p.R582L	1.000	NULL	pfam_PWI_dom,superfamily_PWI_dom,smart_PWI_dom	-	no_errors	SRRM1	HGNC	ENSG00000133226				51	0	0.00	46	3	6.12
SSPN	0	genome.wustl.edu	37	12	26383707	26383707	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	12	26383707	26383707	G	-	DEL	SSPN	ENST00000242729	human	ensembl	74_37	+1	known	frame_shift_del	c.430	p.A144fs	0.998	pfam_CD20-like	pfam_CD20-like	-	no_errors	SSPN	HGNC	ENSG00000123096	tier1			36	0	0.00	41	10	19.61
STK17B	0	genome.wustl.edu	37	2	197010768	197010768	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	197010768	197010768	C	T	SNP	STK17B	ENST00000263955	human	ensembl	74_37	-1	known	missense	c.347	p.G116E	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK17B	HGNC	ENSG00000081320	tier1	-	-	29	0	0.00	14	7	33.33
STX17	0	genome.wustl.edu	37	9	102713526	102713526	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	9	102713526	102713526	C	G	SNP	STX17	ENST00000259400	human	ensembl	74_37	+1	known	missense	c.374	p.T125S	0.052	superfamily_t-SNARE	pfam_T_SNARE_dom,superfamily_t-SNARE,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX17	HGNC	ENSG00000136874	tier1	-	-	63	0	0.00	39	13	24.53
SYNE2	0	genome.wustl.edu	37	14	64588838	64588838	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	14	64588838	64588838	G	A	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.13267	p.E4423K	0.854	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1	-	-	39	0	0.00	25	11	30.56
TAGAP	0	genome.wustl.edu	37	6	159459233	159459233	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	6	159459233	159459233	C	A	SNP	TAGAP	ENST00000367066	human	ensembl	74_37	-1	known	missense	c.811	p.D271Y	0.465	superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	TAGAP	HGNC	ENSG00000164691				31	0	0.00	21	2	8.70
TBC1D32	0	genome.wustl.edu	37	6	121481218	121481218	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	6	121481218	121481218	G	A	SNP	TBC1D32	ENST00000275159	human	ensembl	74_37	-1	putative	missense	c.2834	p.S945L	1.000	NULL	superfamily_Rab-GTPase-TBC_dom	-	no_errors	TBC1D32	HGNC	ENSG00000146350	tier1	-	-	45	0	0.00	12	13	52.00
TIGD3	0	genome.wustl.edu	37	11	65124656	65124656	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	11	65124656	65124656	C	T	SNP	TIGD3	ENST00000309880	human	ensembl	74_37	+1	known	silent	c.1377	p.Y459	0.939	NULL	pfam_HTH_CenpB_DNA-bd_dom,pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_Psq,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	TIGD3	HGNC	ENSG00000173825	tier1	-	-	57	0	0.00	32	8	20.00
TLL2	0	genome.wustl.edu	37	10	98136519	98136519	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	10	98136519	98136519	G	T	SNP	TLL2	ENST00000357947	human	ensembl	74_37	-1	known	missense	c.2378	p.P793H	1.000	pirsf_BMP_1/tolloid-like,pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pirsf_BMP_1/tolloid-like,pfam_CUB_dom,pfam_Peptidase_M12A,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,smart_Peptidase_Metallo,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,prints_Peptidase_M12A,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	TLL2	HGNC	ENSG00000095587	tier1	-	-	72	0	0.00	26	28	51.85
TMEM70	0	genome.wustl.edu	37	8	74891032	74891032	+	Silent	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	8	74891032	74891032	G	T	SNP	TMEM70	ENST00000312184	human	ensembl	74_37	+1	known	silent	c.252	p.T84	0.406	NULL	pfam_DUF1301_TMEM70	-	no_errors	TMEM70	HGNC	ENSG00000175606	tier1	-	-	74	0	0.00	51	4	7.27
TNRC6B	0	genome.wustl.edu	37	22	40661412	40661412	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	22	40661412	40661412	G	A	SNP	TNRC6B	ENST00000454349	human	ensembl	74_37	+1	known	missense	c.1178	p.G393E	1.000	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6B	HGNC	ENSG00000100354	tier1	-	-	28	0	0.00	18	4	18.18
TOM1	0	genome.wustl.edu	37	22	35734728	35734728	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	22	35734728	35734728	G	T	SNP	TOM1	ENST00000411850	human	ensembl	74_37	+1	known	missense	c.1171	p.A391S	1.000	pirsf_TOM1	pfam_VHS,pfam_GAT,superfamily_ENTH_VHS,smart_VHS_subgr,pirsf_TOM1,pfscan_GAT,pfscan_VHS	-	no_errors	TOM1	HGNC	ENSG00000100284	tier1	-	-	113	0	0.00	74	19	20.43
TP53	0	genome.wustl.edu	37	17	7578406	7578406	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	17	7578406	7578406	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.524	p.R175H	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934578	-	30	0	0.00	11	15	57.69
TP53TG3D	0	genome.wustl.edu	37	16	32264978	32264978	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	16	32264978	32264978	C	T	SNP	TP53TG3D	ENST00000354614	human	ensembl	74_37	+1	known	missense	c.304	p.P102S	0.034	NULL	NULL	-	no_errors	TP53TG3D	HGNC	ENSG00000205456	tier1	-	-	185	0	0.00	143	32	18.29
TPTE	0	genome.wustl.edu	37	21	10942941	10942941	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	21	10942941	10942941	C	T	SNP	TPTE	ENST00000361285	human	ensembl	74_37	-1	known	missense	c.646	p.E216K	1.000	pfam_Ion_trans_dom	pfam_Tensin_phosphatase_C2-dom,pfam_Dual-sp_phosphatase_cat-dom,pfam_Ion_trans_dom,superfamily_C2_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TPTE	HGNC	ENSG00000166157	tier1	-	-	176	0	0.00	121	13	9.70
TRAF3	0	genome.wustl.edu	37	14	103371584	103371584	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	14	103371584	103371584	G	C	SNP	TRAF3	ENST00000392745	human	ensembl	74_37	+1	known	missense	c.1170	p.Q390H	1.000	pirsf_TNF_rcpt--assoc_TRAF	pfam_MATH,superfamily_TRAF-like,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF3	HGNC	ENSG00000131323	tier1	-	-	65	0	0.00	37	27	42.19
TRAK1	0	genome.wustl.edu	37	3	42265157	42265157	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	3	42265157	42265157	G	A	SNP	TRAK1	ENST00000396175	human	ensembl	74_37	+1	known	missense	c.2616	p.M872I	1.000	NULL	pfam_HAP1_N,pfam_Traffickng_kinesin-bd_prot_dom	-	no_errors	TRAK1	HGNC	ENSG00000182606	tier1	-	-	43	0	0.00	12	12	50.00
TSGA10	0	genome.wustl.edu	37	2	99634813	99634813	+	Splice_Site	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	99634813	99634813	C	T	SNP	TSGA10	ENST00000355053	human	ensembl	74_37	-1	known	splice_site	c.1923-1	e15-1	1.000	-	-	-	no_errors	TSGA10	HGNC	ENSG00000135951	tier1	-	-	43	0	0.00	27	6	17.65
TTN	0	genome.wustl.edu	37	2	179486627	179486627	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	2	179486627	179486627	C	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.37318	p.E12440K	1.000	pfam_Ig_I-set,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	65	0	0.00	45	25	35.71
UBQLN2	0	genome.wustl.edu	37	X	56590987	56590987	+	Frame_Shift_Del	DEL	C	C	-			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	X	56590987	56590987	C	-	DEL	UBQLN2	ENST00000338222	human	ensembl	74_37	+1	known	frame_shift_del	c.681	p.P228fs	1.000	superfamily_ARM-type_fold,smart_STI1_HS-bd	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,pfam_UBA/Ts_N,superfamily_UBA-like,superfamily_ARM-type_fold,superfamily_XPC-bd,smart_Ubiquitin_dom,smart_STI1_HS-bd,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Ubiquitin_supergroup	-	no_errors	UBQLN2	HGNC	ENSG00000188021	tier1			12	0	0.00	10	5	33.33
UBR4	0	genome.wustl.edu	37	1	19493660	19493660	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	1	19493660	19493660	C	T	SNP	UBR4	ENST00000375267	human	ensembl	74_37	-1	known	missense	c.3965	p.S1322N	1.000	superfamily_ARM-type_fold	superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR4	HGNC	ENSG00000127481	tier1	-	-	54	0	0.00	22	14	38.89
URGCP	0	genome.wustl.edu	37	7	43917445	43917445	+	Silent	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	7	43917445	43917445	C	T	SNP	URGCP	ENST00000453200	human	ensembl	74_37	-1	known	silent	c.1617	p.Q539	1.000	NULL	superfamily_P-loop_NTPase,prints_GTP_binding_domain	-	no_errors	URGCP	HGNC	ENSG00000106608	tier1	-	-	55	0	0.00	35	33	48.53
WDR90	0	genome.wustl.edu	37	16	701947	701947	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	16	701947	701947	G	C	SNP	WDR90	ENST00000549091	human	ensembl	74_37	+1	novel	missense	c.961	p.E321Q	0.000	NULL	pfam_WD40_repeat,pfam_DUF667,pfam_Nucleoporin_Nup160,superfamily_Quinonprotein_ADH-like_supfam,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR90	HGNC	ENSG00000161996				24	0	0.00	12	2	14.29
WHSC1L1	0	genome.wustl.edu	37	8	38173482	38173482	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	8	38173482	38173482	G	T	SNP	WHSC1L1	ENST00000317025	human	ensembl	74_37	-1	known	nonsense	c.1934	p.S645*	1.000	NULL	pfam_PWWP_dom,pfam_SET_dom,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	WHSC1L1	HGNC	ENSG00000147548				18	0	0.00	19	3	13.64
ZFX	0	genome.wustl.edu	37	X	24190949	24190949	+	RNA	SNP	C	C	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	X	24190949	24190949	C	T	SNP	ZFX	ENST00000480195	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	ZFX	HGNC	ENSG00000005889	tier1	-	-	30	0	0.00	16	9	36.00
ZNF208	0	genome.wustl.edu	37	19	22157331	22157331	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	22157331	22157331	C	A	SNP	ZNF208	ENST00000397126	human	ensembl	74_37	-1	novel	nonsense	c.505	p.G169*	0.361	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF208	HGNC	ENSG00000160321	tier1	-	-	158	0	0.00	110	27	19.71
ZNF350	0	genome.wustl.edu	37	19	52468501	52468501	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	52468501	52468501	T	C	SNP	ZNF350	ENST00000243644	human	ensembl	74_37	-1	known	missense	c.1205	p.Y402C	0.046	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF350	HGNC	ENSG00000256683	tier1	rs150778438	-	74	0	0.00	31	19	38.00
ZNF428	0	genome.wustl.edu	37	19	44112223	44112223	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	44112223	44112223	G	A	SNP	ZNF428	ENST00000300811	human	ensembl	74_37	-1	known	missense	c.113	p.S38L	1.000	NULL	pfscan_Znf_C2H2	-	no_errors	ZNF428	HGNC	ENSG00000131116	tier1	-	-	36	0	0.00	13	7	35.00
ZNF429	0	genome.wustl.edu	37	19	21712490	21712490	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	21712490	21712490	G	A	SNP	ZNF429	ENST00000597078	human	ensembl	74_37	+1	putative	missense	c.34	p.E12K	0.940	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF429	HGNC	ENSG00000197013	tier1	-	-	97	0	0.00	65	34	34.34
ZNF443	0	genome.wustl.edu	37	19	12541042	12541042	+	Silent	SNP	T	T	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	12541042	12541042	T	C	SNP	ZNF443	ENST00000301547	human	ensembl	74_37	-1	known	silent	c.1944	p.P648	0.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF443	HGNC	ENSG00000180855				133	0	0.00	82	10	10.87
ZNF512B	0	genome.wustl.edu	37	20	62592679	62592679	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	20	62592679	62592679	G	T	SNP	ZNF512B	ENST00000217130	human	ensembl	74_37	-1	known	missense	c.2410	p.L804M	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF512B	HGNC	ENSG00000196700	tier1	-	-	55	0	0.00	33	12	26.67
ZNF582	0	genome.wustl.edu	37	19	56895658	56895658	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	56895658	56895658	A	T	SNP	ZNF582	ENST00000301310	human	ensembl	74_37	-1	known	missense	c.1128	p.F376L	0.004	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF582	HGNC	ENSG00000018869	tier1	-	-	35	0	0.00	19	16	45.71
ZNF737	0	genome.wustl.edu	37	19	20736632	20736632	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	20736632	20736632	G	T	SNP	ZNF737	ENST00000597940	human	ensembl	74_37	-1	known	nonsense	c.111	p.C37*	0.006	NULL	NULL	-	no_errors	ZNF737	HGNC	ENSG00000237440	tier1	-	-	70	0	0.00	52	4	7.14
ZNF772	0	genome.wustl.edu	37	19	57985077	57985077	+	Silent	SNP	A	A	T			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	57985077	57985077	A	T	SNP	ZNF772	ENST00000343280	human	ensembl	74_37	-1	known	silent	c.1035	p.T345	0.998	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF772	HGNC	ENSG00000197128	tier1	-	-	58	0	0.00	41	28	40.58
ZNF788	0	genome.wustl.edu	37	19	12203239	12203239	+	RNA	SNP	C	C	G			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	19	12203239	12203239	C	G	SNP	ZNF788	ENST00000397755	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.026	-	-	-	no_errors	ZNF788	HGNC	ENSG00000214189	tier1	-	-	74	0	0.00	43	16	27.12
ZSCAN25	0	genome.wustl.edu	37	7	99226869	99226869	+	Silent	SNP	G	G	A			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	7	99226869	99226869	G	A	SNP	ZSCAN25	ENST00000334715	human	ensembl	74_37	+1	known	silent	c.861	p.A287	0.230	NULL	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN25	HGNC	ENSG00000197037	tier1	-	-	45	0	0.00	17	9	34.62
ZZEF1	0	genome.wustl.edu	37	17	3981250	3981250	+	Silent	SNP	T	T	C			TCGA-LN-A4MR-01A-11D-A28B-09	TCGA-LN-A4MR-10A-01D-A28E-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ecf994e6-048e-4018-9722-ea4933b798d4	59ed9bfb-00bb-41ef-ad61-c64a5dacb24d	17	3981250	3981250	T	C	SNP	ZZEF1	ENST00000381638	human	ensembl	74_37	-1	known	silent	c.2916	p.L972	0.871	NULL	pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_CUB_dom,smart_EF_hand_dom,smart_Znf_ZZ,pfscan_EF_hand_dom,pfscan_Znf_ZZ	-	no_errors	ZZEF1	HGNC	ENSG00000074755	tier1	-	-	19	0	0.00	17	7	29.17
