Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AASDH	0	genome.wustl.edu	37	4	57216134	57216134	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	4	57216134	57216134	G	A	SNP	AASDH	ENST00000205214	human	ensembl	74_37	-1	known	missense	c.1783	p.L595F	0.993	pfam_Acyl_carrier_prot-like,superfamily_Acyl_carrier_prot-like,pfscan_Acyl_carrier_prot-like	pfam_AMP-dep_Synth/Lig,pfam_Acyl_carrier_prot-like,superfamily_Quinonprotein_ADH-like_supfam,superfamily_Acyl_carrier_prot-like,smart_PQQ_beta_propeller_repeat,pfscan_Acyl_carrier_prot-like	-	no_errors	AASDH	HGNC	ENSG00000157426	tier1	-	-	94	0	0.00	47	13	20.97
ABCA10	0	genome.wustl.edu	37	17	67197721	67197721	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	67197721	67197721	C	A	SNP	ABCA10	ENST00000269081	human	ensembl	74_37	-1	known	missense	c.1095	p.E365D	0.800	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA10	HGNC	ENSG00000154263	tier1	-	-	103	0	0.00	64	4	5.88
ABCA7	0	genome.wustl.edu	37	19	1044733	1044733	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	1044733	1044733	G	T	SNP	ABCA7	ENST00000263094	human	ensembl	74_37	+1	known	missense	c.1205	p.R402L	0.001	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_GroES-like,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA7	HGNC	ENSG00000064687	tier1	-	-	198	0	0.00	95	5	5.00
ABCC9	0	genome.wustl.edu	37	12	22013930	22013930	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	22013930	22013930	C	G	SNP	ABCC9	ENST00000261200	human	ensembl	74_37	-1	known	missense	c.2399	p.G800A	1.000	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_Sulphorea_rcpt,prints_Sulphonylurea_rcpt-2	-	no_errors	ABCC9	HGNC	ENSG00000069431	tier1	-	-	76	0	0.00	34	8	19.05
ABCD3	0	genome.wustl.edu	37	1	94946009	94946009	+	RNA	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	94946009	94946009	A	G	SNP	ABCD3	ENST00000493416	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ABCD3	HGNC	ENSG00000117528	tier1	-	-	110	0	0.00	37	31	45.59
ABHD6	0	genome.wustl.edu	37	3	58256768	58256768	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	58256768	58256768	G	T	SNP	ABHD6	ENST00000295962	human	ensembl	74_37	+1	known	missense	c.500	p.S167I	1.000	pfam_AB_hydrolase_1,pfam_Ndr,prints_AB_hydrolase_1,prints_Epox_hydrolase-like	pfam_AB_hydrolase_1,pfam_Ndr,prints_AB_hydrolase_1,prints_Epox_hydrolase-like	-	no_errors	ABHD6	HGNC	ENSG00000163686	tier1	-	-	84	0	0.00	24	4	14.29
AGRN	0	genome.wustl.edu	37	1	987191	987191	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	987191	987191	G	T	SNP	AGRN	ENST00000379370	human	ensembl	74_37	+1	known	nonsense	c.5647	p.E1883*	0.970	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Agrin_NtA,pfam_Kazal_dom,pfam_EGF_laminin,pfam_SEA_dom,pfam_EG-like_dom,superfamily_TIMP-like_OB-fold,superfamily_ConA-like_lec_gl_sf,smart_FacI_MAC,smart_Fol_N,smart_Kazal_dom,smart_EG-like_dom,smart_EGF_laminin,smart_SEA_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Agrin_NtA,pfscan_SEA_dom	-	no_errors	AGRN	HGNC	ENSG00000188157	tier1	-	-	102	0	0.00	26	13	33.33
AKAP12	0	genome.wustl.edu	37	6	151672917	151672917	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	6	151672917	151672917	G	T	SNP	AKAP12	ENST00000253332	human	ensembl	74_37	+1	known	nonsense	c.3391	p.E1131*	0.000	NULL	pfam_Pkinase-A_anch_WSK-motif,pfam_RII_binding_1	-	no_errors	AKAP12	HGNC	ENSG00000131016				67	0	0.00	34	2	5.56
ALS2	0	genome.wustl.edu	37	2	202625891	202625891	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	202625891	202625891	G	T	SNP	ALS2	ENST00000264276	human	ensembl	74_37	-1	known	missense	c.826	p.L276I	0.558	NULL	pfam_Reg_chr_condens,pfam_MORN,pfam_VPS9,pfam_DH-domain,superfamily_RCC1/BLIP-II,superfamily_DH-domain,smart_MORN,pfscan_VPS9,pfscan_Reg_chr_condens,pfscan_DH-domain,prints_Reg_chr_condens	-	no_errors	ALS2	HGNC	ENSG00000003393				43	0	0.00	28	3	9.68
ANHX	0	genome.wustl.edu	37	12	133795907	133795907	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	133795907	133795907	A	C	SNP	ANHX	ENST00000419717	human	ensembl	74_37	-1	known	missense	c.1015	p.S339A	0.010	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	ANHX	HGNC	ENSG00000227059	tier1	-	-	33	0	0.00	11	12	52.17
ANKRD36B	0	genome.wustl.edu	37	2	98167802	98167802	+	RNA	SNP	G	G	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	98167802	98167802	G	C	SNP	ANKRD36B	ENST00000419390	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.034	-	-	-	no_errors	ANKRD36B	HGNC	ENSG00000196912	tier1	-	-	297	0	0.00	132	20	13.07
ANXA7	0	genome.wustl.edu	37	10	75147469	75147469	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	10	75147469	75147469	G	T	SNP	ANXA7	ENST00000372919	human	ensembl	74_37	-1	known	missense	c.677	p.A226E	1.000	pfam_Annexin_repeat,smart_Annexin_repeat,prints_AnnexinIV	pfam_Annexin_repeat,smart_Annexin_repeat,prints_Annexin,prints_AnnexinVII,prints_AnnexinIV	-	no_errors	ANXA7	HGNC	ENSG00000138279				68	0	0.00	55	3	5.17
APC	0	genome.wustl.edu	37	5	112174217	112174217	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	112174217	112174217	A	G	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	missense	c.2926	p.R976G	1.000	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982				75	0	0.00	37	2	5.13
APCDD1	0	genome.wustl.edu	37	18	10487902	10487902	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	18	10487902	10487902	C	T	SNP	APCDD1	ENST00000355285	human	ensembl	74_37	+1	known	missense	c.1412	p.P471L	0.502	NULL	NULL	-	no_errors	APCDD1	HGNC	ENSG00000154856	tier1	-	-	54	0	0.00	20	11	35.48
APEH	0	genome.wustl.edu	37	3	49713493	49713493	+	Frame_Shift_Del	DEL	C	C	-			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	49713493	49713493	C	-	DEL	APEH	ENST00000296456	human	ensembl	74_37	+1	known	frame_shift_del	c.447	p.F150fs	1.000	NULL	pfam_Peptidase_S9,pfam_AB_hydrolase_1,pfam_Dienelactn_hydro	-	no_errors	APEH	HGNC	ENSG00000164062	tier1			116	0	0.00	18	2	10.00
APOBEC1	0	genome.wustl.edu	37	12	7803631	7803631	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	7803631	7803631	G	T	SNP	APOBEC1	ENST00000229304	human	ensembl	74_37	-1	known	missense	c.549	p.H183Q	1.000	NULL	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	APOBEC1	HGNC	ENSG00000111701	tier1	-	-	71	0	0.00	38	4	9.52
AQR	0	genome.wustl.edu	37	15	35210573	35210573	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	15	35210573	35210573	G	T	SNP	AQR	ENST00000156471	human	ensembl	74_37	-1	known	missense	c.1228	p.R410S	1.000	NULL	superfamily_P-loop_NTPase	-	no_errors	AQR	HGNC	ENSG00000021776				55	0	0.00	47	3	6.00
ARHGAP44	0	genome.wustl.edu	37	17	12823098	12823098	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	12823098	12823098	G	T	SNP	ARHGAP44	ENST00000379672	human	ensembl	74_37	+1	known	missense	c.414	p.Q138H	1.000	pfam_BAR_dom,smart_BAR_dom,pfscan_BAR_dom	pfam_BAR_dom,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_BAR_dom,smart_RhoGAP_dom,pfscan_BAR_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP44	HGNC	ENSG00000006740	tier1	-	-	93	0	0.00	67	4	5.63
ARHGAP44	0	genome.wustl.edu	37	17	12877410	12877410	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	12877410	12877410	G	T	SNP	ARHGAP44	ENST00000379672	human	ensembl	74_37	+1	known	missense	c.1546	p.G516C	1.000	NULL	pfam_BAR_dom,pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_BAR_dom,smart_RhoGAP_dom,pfscan_BAR_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP44	HGNC	ENSG00000006740	tier1	-	-	96	0	0.00	58	5	7.94
ARHGEF16	0	genome.wustl.edu	37	1	3380122	3380122	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	3380122	3380122	G	T	SNP	ARHGEF16	ENST00000378378	human	ensembl	74_37	+1	known	missense	c.474	p.M158I	1.000	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain	-	no_errors	ARHGEF16	HGNC	ENSG00000130762	tier1	-	-	110	0	0.00	60	4	6.15
ARHGEF2	0	genome.wustl.edu	37	1	155920753	155920753	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	155920753	155920753	C	T	SNP	ARHGEF2	ENST00000368315	human	ensembl	74_37	-1	known	missense	c.2573	p.R858Q	0.301	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF2	HGNC	ENSG00000116584				21	0	0.00	7	3	30.00
ARID2	0	genome.wustl.edu	37	12	46244203	46244203	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	46244203	46244203	C	A	SNP	ARID2	ENST00000334344	human	ensembl	74_37	+1	known	missense	c.2297	p.P766Q	1.000	NULL	pfam_ARID/BRIGHT_DNA-bd,pfam_DNA-bd_RFX,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID2	HGNC	ENSG00000189079				36	0	0.00	19	2	9.52
ARPP21	0	genome.wustl.edu	37	3	35833701	35833701	+	RNA	SNP	T	T	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	35833701	35833701	T	C	SNP	ARPP21	ENST00000476052	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ARPP21	HGNC	ENSG00000172995	tier1	-	-	43	0	0.00	4	11	73.33
ARV1	0	genome.wustl.edu	37	1	231124099	231124099	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	231124099	231124099	G	T	SNP	ARV1	ENST00000310256	human	ensembl	74_37	+1	known	nonsense	c.208	p.E70*	0.998	pfam_Arv1	pfam_Arv1	-	no_errors	ARV1	HGNC	ENSG00000173409	tier1	-	-	80	0	0.00	63	4	5.97
ASIC4	0	genome.wustl.edu	37	2	220396490	220396490	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	220396490	220396490	G	T	SNP	ASIC4	ENST00000347842	human	ensembl	74_37	+1	known	missense	c.974	p.R325L	1.000	pfam_Na+channel_ASC	pfam_Na+channel_ASC,prints_Na+channel_ASC	-	no_errors	ASIC4	HGNC	ENSG00000072182				68	0	0.00	37	2	5.13
ASIC5	0	genome.wustl.edu	37	4	156764980	156764980	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	4	156764980	156764980	C	A	SNP	ASIC5	ENST00000537611	human	ensembl	74_37	-1	known	missense	c.714	p.E238D	0.085	pfam_Na+channel_ASC,prints_Na+channel_ASC	pfam_Na+channel_ASC,prints_Na+channel_ASC	-	no_errors	ASIC5	HGNC	ENSG00000256394	tier1	-	-	107	0	0.00	51	5	8.93
ATG2A	0	genome.wustl.edu	37	11	64679849	64679849	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	64679849	64679849	G	T	SNP	ATG2A	ENST00000421419	human	ensembl	74_37	-1	known	missense	c.872	p.P291Q	0.996	NULL	pfam_Autophagy-rel_C	-	no_errors	ATG2A	HGNC	ENSG00000110046				54	0	0.00	30	2	6.25
ATG9B	0	genome.wustl.edu	37	7	150715097	150715097	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	150715097	150715097	G	T	SNP	ATG9B	ENST00000377974	human	ensembl	74_37	-1	known	missense	c.1913	p.P638Q	0.999	pfam_Autophagy-rel_prot_9	pfam_Autophagy-rel_prot_9	-	no_errors	ATG9B	HGNC	ENSG00000181652	tier1	-	-	136	0	0.00	57	4	6.56
ATP10D	0	genome.wustl.edu	37	4	47548721	47548721	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	4	47548721	47548721	A	G	SNP	ATP10D	ENST00000273859	human	ensembl	74_37	+1	known	missense	c.1477	p.M493V	0.005	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10D	HGNC	ENSG00000145246	tier1	-	-	67	0	0.00	11	10	43.48
ATP13A1	0	genome.wustl.edu	37	19	19764654	19764654	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	19764654	19764654	C	A	SNP	ATP13A1	ENST00000357324	human	ensembl	74_37	-1	known	missense	c.2039	p.R680L	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A1	HGNC	ENSG00000105726				98	0	0.00	26	2	7.14
ATP13A4-AS1	0	genome.wustl.edu	37	3	193272452	193272452	+	RNA	SNP	T	T	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	193272452	193272452	T	C	SNP	ATP13A4-AS1	ENST00000426459	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ATP13A4-AS1	HGNC	ENSG00000225473	tier1	-	-	38	0	0.00	28	4	12.50
ATXN10	0	genome.wustl.edu	37	22	46125395	46125395	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	22	46125395	46125395	G	T	SNP	ATXN10	ENST00000252934	human	ensembl	74_37	+1	known	missense	c.819	p.E273D	0.109	superfamily_ARM-type_fold	pfam_Ataxin-10_domain,superfamily_ARM-type_fold	-	no_errors	ATXN10	HGNC	ENSG00000130638				93	0	0.00	56	3	5.08
AZI2	0	genome.wustl.edu	37	3	28364174	28364174	+	RNA	SNP	T	T	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	28364174	28364174	T	C	SNP	AZI2	ENST00000295748	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	AZI2	HGNC	ENSG00000163512	tier1	-	-	50	0	0.00	36	8	18.18
BBS1	0	genome.wustl.edu	37	11	66288790	66288790	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	66288790	66288790	A	C	SNP	BBS1	ENST00000419755	human	ensembl	74_37	+1	known	missense	c.884	p.D295A	1.000	superfamily_Quinonprotein_ADH-like_supfam	superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	CTD-3074O7.11	Clone_based_vega_gene	ENSG00000256349	tier1	-	-	105	0	0.00	47	12	20.34
BCAR3	0	genome.wustl.edu	37	1	94033320	94033320	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	94033320	94033320	C	T	SNP	BCAR3	ENST00000260502	human	ensembl	74_37	-1	known	missense	c.2063	p.S688N	1.000	superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_SH2,pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_SH2,smart_RasGRF_CDC25,pfscan_SH2,pfscan_RasGRF_CDC25	-	no_errors	BCAR3	HGNC	ENSG00000137936				52	0	0.00	25	3	10.71
BCAT2	0	genome.wustl.edu	37	19	49299887	49299887	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	49299887	49299887	G	A	SNP	BCAT2	ENST00000316273	human	ensembl	74_37	-1	known	missense	c.1013	p.S338L	0.998	pfam_Aminotrans_IV,superfamily_Aminotrans_IV,pirsf_B_amino_transII,tigrfam_B_amino_transII	pfam_Aminotrans_IV,superfamily_Aminotrans_IV,pirsf_B_amino_transII,tigrfam_B_amino_transII	-	no_errors	BCAT2	HGNC	ENSG00000105552	tier1	-	-	108	0	0.00	35	12	25.00
BCL2L10	0	genome.wustl.edu	37	15	52402143	52402143	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	15	52402143	52402143	G	T	SNP	BCL2L10	ENST00000260442	human	ensembl	74_37	-1	known	missense	c.517	p.P173T	0.000	NULL	pfam_Blc2_fam,pfscan_Bcl2-like	-	no_errors	BCL2L10	HGNC	ENSG00000137875	tier1	-	-	49	0	0.00	46	4	8.00
BCL9	0	genome.wustl.edu	37	1	147091533	147091533	+	Silent	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	147091533	147091533	A	G	SNP	BCL9	ENST00000234739	human	ensembl	74_37	+1	known	silent	c.1572	p.E524	0.911	NULL	pfam_BCL9_beta-catenin-bd_dom	-	no_errors	BCL9	HGNC	ENSG00000116128	tier1	-	-	65	0	0.00	19	14	42.42
BZRAP1	0	genome.wustl.edu	37	17	56383220	56383220	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	56383220	56383220	G	T	SNP	BZRAP1	ENST00000355701	human	ensembl	74_37	-1	known	nonsense	c.5231	p.S1744*	0.000	NULL	pfam_SH3_2,superfamily_SH3_domain,superfamily_Fibronectin_type3,smart_SH3_domain,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_SH3_domain	-	no_errors	BZRAP1	HGNC	ENSG00000005379	tier1	-	-	82	0	0.00	44	4	8.33
C10orf137	0	genome.wustl.edu	37	10	127438041	127438041	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	10	127438041	127438041	G	A	SNP	C10orf137	ENST00000356792	human	ensembl	74_37	+1	known	missense	c.3184	p.A1062T	1.000	NULL	NULL	-	no_errors	C10orf137	HGNC	ENSG00000107938	tier1	-	-	62	0	0.00	50	4	7.41
C14orf39	0	genome.wustl.edu	37	14	60950412	60950412	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	14	60950412	60950412	C	A	SNP	C14orf39	ENST00000321731	human	ensembl	74_37	-1	known	missense	c.230	p.R77I	0.977	NULL	NULL	-	no_errors	C14orf39	HGNC	ENSG00000179008				58	0	0.00	37	2	5.13
C6	0	genome.wustl.edu	37	5	41199895	41199895	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	41199895	41199895	G	T	SNP	C6	ENST00000263413	human	ensembl	74_37	-1	known	nonsense	c.420	p.C140*	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_MACPF,pfam_Sushi_SCR_CCP,pfam_Thrombospondin_1_rpt,pfam_LDrepeatLR_classA_rpt,pfam_Kazal_dom,superfamily_Sushi_SCR_CCP,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,smart_Sushi_SCR_CCP,smart_FacI_MAC,prints_MAC_perforin,pfscan_LDrepeatLR_classA_rpt,pfscan_Sushi_SCR_CCP,pfscan_Thrombospondin_1_rpt	-	no_errors	C6	HGNC	ENSG00000039537	tier1	-	-	103	0	0.00	53	4	7.02
C7orf63	0	genome.wustl.edu	37	7	89894642	89894642	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	89894642	89894642	G	T	SNP	C7orf63	ENST00000389297	human	ensembl	74_37	+1	known	silent	c.384	p.S128	0.513	NULL	superfamily_ARM-type_fold	-	no_errors	C7orf63	HGNC	ENSG00000105792				103	0	0.00	58	4	6.45
C8orf34	0	genome.wustl.edu	37	8	69699681	69699681	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	8	69699681	69699681	G	T	SNP	C8orf34	ENST00000518698	human	ensembl	74_37	+1	known	nonsense	c.1459	p.E487*	1.000	NULL	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	-	no_errors	C8orf34	HGNC	ENSG00000165084				48	0	0.00	23	2	8.00
CACNA2D2	0	genome.wustl.edu	37	3	50431572	50431572	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	50431572	50431572	G	T	SNP	CACNA2D2	ENST00000435965	human	ensembl	74_37	-1	known	missense	c.433	p.Q145K	1.000	pfam_VWA_N	pfam_VWA_N,pfam_VDCC_a2/dsu,pfam_Cache_domain,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	-	no_errors	CACNA2D2	HGNC	ENSG00000007402	tier1	-	-	74	0	0.00	16	3	15.79
CAD	0	genome.wustl.edu	37	2	27447238	27447238	+	Silent	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	27447238	27447238	C	A	SNP	CAD	ENST00000264705	human	ensembl	74_37	+1	known	silent	c.1134	p.L378	0.987	NULL	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_Asp/Orn_carbamoyltranf_P-bd,pfam_GATASE,pfam_Asp_carbamoyltransf_Asp/Orn-bd,pfam_CarbamoylP_synth_lsu_oligo,pfam_CarbamoylP_synth_lsu_N,pfam_ATP-grasp_carboxylate-amine,pfam_MGS-like_dom,pfam_Dala_Dala_lig_C,pfam_Amidohydro_1,superfamily_Asp/Orn_carbamoylTrfase,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,superfamily_Metal-dep_hydrolase_composite,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,prints_Asp_carbamoyltransf,prints_Asp/Orn_carbamoylTrfase,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu,tigrfam_Asp_carbamoyltransf	-	no_errors	CAD	HGNC	ENSG00000084774				66	0	0.00	24	3	11.11
CAMSAP2	0	genome.wustl.edu	37	1	200817688	200817688	+	Silent	SNP	T	T	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	200817688	200817688	T	G	SNP	CAMSAP2	ENST00000236925	human	ensembl	74_37	+1	known	silent	c.1824	p.G608	0.992	NULL	pfam_CKK_domain,pfam_CAMSAP_CH,pfam_CH-domain,superfamily_PRC_barrel-like,superfamily_CH-domain	-	no_errors	CAMSAP2	HGNC	ENSG00000118200	tier1	-	-	64	0	0.00	21	12	35.29
CAPN1	0	genome.wustl.edu	37	11	64953781	64953781	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	64953781	64953781	G	T	SNP	CAPN1	ENST00000279247	human	ensembl	74_37	+1	known	missense	c.731	p.R244L	0.985	pfam_Peptidase_C2_calpain_cat,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN1	HGNC	ENSG00000014216	tier1	-	-	74	0	0.00	47	4	7.84
CC2D1B	0	genome.wustl.edu	37	1	52826727	52826727	+	Silent	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	52826727	52826727	G	A	SNP	CC2D1B	ENST00000371586	human	ensembl	74_37	-1	known	silent	c.396	p.G132	0.007	NULL	pfam_C2_dom,superfamily_C2_dom,smart_DM14,smart_C2_dom	-	no_errors	CC2D1B	HGNC	ENSG00000154222				51	0	0.00	34	4	10.53
CCDC110	0	genome.wustl.edu	37	4	186379789	186379789	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	4	186379789	186379789	G	T	SNP	CCDC110	ENST00000307588	human	ensembl	74_37	-1	known	missense	c.1952	p.S651Y	0.007	NULL	superfamily_4_helix_cytokine-like_core	-	no_errors	CCDC110	HGNC	ENSG00000168491				55	0	0.00	22	3	12.00
CCDC132	0	genome.wustl.edu	37	7	92882065	92882065	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	92882065	92882065	G	T	SNP	CCDC132	ENST00000305866	human	ensembl	74_37	+1	known	missense	c.202	p.D68Y	1.000	pfam_Vacuolar_sorting-assoc_54	pfam_Vacuolar_sorting-assoc_54,pfam_DUF2451_C	-	no_errors	CCDC132	HGNC	ENSG00000004766				113	0	0.00	57	4	6.56
CCDC74B	0	genome.wustl.edu	37	2	130900736	130900736	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	130900736	130900736	G	A	SNP	CCDC74B	ENST00000409234	human	ensembl	74_37	-1	putative	missense	c.401	p.P134L	0.142	NULL	NULL	-	no_errors	CCDC74B	HGNC	ENSG00000152076	tier1	-	-	113	0	0.00	36	19	34.55
CCNDBP1	0	genome.wustl.edu	37	15	43481479	43481479	+	Splice_Site	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	15	43481479	43481479	G	T	SNP	CCNDBP1	ENST00000300213	human	ensembl	74_37	+1	known	splice_site	c.331+1	e4+1	1.000	-	-	-	no_errors	CCNDBP1	HGNC	ENSG00000166946				48	0	0.00	53	4	7.02
CCNK	0	genome.wustl.edu	37	14	99969314	99969314	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	14	99969314	99969314	G	A	SNP	CCNK	ENST00000389879	human	ensembl	74_37	+1	known	missense	c.1004	p.R335Q	0.969	NULL	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNK	HGNC	ENSG00000090061	tier1	-	-	77	0	0.00	40	17	29.31
CCNL2	0	genome.wustl.edu	37	1	1330816	1330816	+	Silent	SNP	G	G	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	1330816	1330816	G	C	SNP	CCNL2	ENST00000400809	human	ensembl	74_37	-1	known	silent	c.552	p.L184	0.981	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_L	-	no_errors	CCNL2	HGNC	ENSG00000221978	tier1	-	-	71	0	0.00	39	10	20.41
CD22	0	genome.wustl.edu	37	19	35832675	35832675	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	35832675	35832675	G	T	SNP	CD22	ENST00000085219	human	ensembl	74_37	+1	known	silent	c.1842	p.L614	0.469	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Immunoglobulin,pfam_Ig_I-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CD22	HGNC	ENSG00000012124	tier1	-	-	134	0	0.00	42	4	8.70
CDIPT	0	genome.wustl.edu	37	16	29872754	29872754	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	16	29872754	29872754	C	T	SNP	CDIPT	ENST00000561555	human	ensembl	74_37	-1	putative	missense	c.77	p.G26D	0.008	pirsf_CDP_diag_ino_3_P_euk	pirsf_CDP_diag_ino_3_P_euk	-	no_errors	CDIPT	HGNC	ENSG00000103502	tier1	-	-	69	0	0.00	53	4	7.02
CDK11A	0	genome.wustl.edu	37	1	1635409	1635409	+	RNA	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	1635409	1635409	G	T	SNP	CDK11A	ENST00000495016	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	CDK11A	HGNC	ENSG00000008128	tier1	-	-	175	0	0.00	75	20	21.05
CELF6	0	genome.wustl.edu	37	15	72608242	72608242	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	15	72608242	72608242	G	T	SNP	CELF6	ENST00000569547	human	ensembl	74_37	-1	known	silent	c.289	p.R97	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CELF6	Uniprot_gn	ENSG00000273025	tier1	-	-	84	0	0.00	79	11	12.22
CHCHD6	0	genome.wustl.edu	37	3	126633522	126633522	+	Splice_Site	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	126633522	126633522	G	T	SNP	CHCHD6	ENST00000290913	human	ensembl	74_37	+1	known	splice_site	c.496-1	e6-1	1.000	-	-	-	no_errors	CHCHD6	HGNC	ENSG00000159685				60	0	0.00	44	3	6.38
CHMP3	0	genome.wustl.edu	37	2	86733063	86733063	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	86733063	86733063	C	T	SNP	CHMP3	ENST00000439940	human	ensembl	74_37	-1	known	missense	c.620	p.G207D	1.000	pfam_Snf7	pfam_Snf7	-	no_errors	CHMP3	HGNC	ENSG00000115561	tier1	-	-	26	0	0.00	20	4	16.67
CLCN1	0	genome.wustl.edu	37	7	143027934	143027934	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	143027934	143027934	C	T	SNP	CLCN1	ENST00000343257	human	ensembl	74_37	+1	known	missense	c.923	p.A308V	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated,prints_Cl_channel-1	-	no_errors	CLCN1	HGNC	ENSG00000188037	tier1	-	-	77	0	0.00	33	4	10.81
CLCN2	0	genome.wustl.edu	37	3	184075234	184075234	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	184075234	184075234	C	G	SNP	CLCN2	ENST00000265593	human	ensembl	74_37	-1	known	missense	c.814	p.V272L	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated,prints_Cl-channel-2	-	no_errors	CLCN2	HGNC	ENSG00000114859	tier1	-	-	122	0	0.00	11	95	89.62
CMAS	0	genome.wustl.edu	37	12	22218096	22218096	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	22218096	22218096	C	A	SNP	CMAS	ENST00000229329	human	ensembl	74_37	+1	known	missense	c.1156	p.L386I	1.000	superfamily_HAD-like_dom	pfam_Cytidylyl_trans,superfamily_HAD-like_dom	-	no_errors	CMAS	HGNC	ENSG00000111726	tier1	-	-	106	0	0.00	39	4	9.30
CNNM2	0	genome.wustl.edu	37	10	104835858	104835858	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	10	104835858	104835858	C	G	SNP	CNNM2	ENST00000369878	human	ensembl	74_37	+1	known	missense	c.2249	p.P750R	1.000	NULL	pfam_DUF21,superfamily_cNMP-bd-like	-	no_errors	CNNM2	HGNC	ENSG00000148842	tier1	-	-	130	0	0.00	50	10	16.67
CNOT4	0	genome.wustl.edu	37	7	135047903	135047903	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	135047903	135047903	G	T	SNP	CNOT4	ENST00000541284	human	ensembl	74_37	-1	known	missense	c.1876	p.L626I	1.000	NULL	pfam_RRM_dom,smart_RRM_dom_euk,pfscan_Znf_RING,pfscan_RRM_dom	-	no_errors	CNOT4	HGNC	ENSG00000080802	tier1	-	-	47	0	0.00	21	3	12.50
COL1A1	0	genome.wustl.edu	37	17	48276617	48276617	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	48276617	48276617	G	0	DEL	COL1A1	ENST00000225964	human	ensembl	74_37	-1	known	frame_shift_del	c.441	p.G148fs	0.198	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL1A1	HGNC	ENSG00000108821				8	0	0.00	4	2	33.33
COL27A1	0	genome.wustl.edu	37	9	116994111	116994111	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	9	116994111	116994111	G	T	SNP	COL27A1	ENST00000356083	human	ensembl	74_37	+1	known	missense	c.2530	p.G844C	1.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL27A1	HGNC	ENSG00000196739	tier1	-	-	108	0	0.00	63	4	5.97
COL2A1	0	genome.wustl.edu	37	12	48372118	48372118	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	48372118	48372118	C	A	SNP	COL2A1	ENST00000380518	human	ensembl	74_37	-1	known	missense	c.2959	p.G987W	1.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL2A1	HGNC	ENSG00000139219	tier1	-	-	59	0	0.00	19	3	13.64
COL6A5	0	genome.wustl.edu	37	3	130124990	130124990	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	130124990	130124990	G	T	SNP	COL6A5	ENST00000265379	human	ensembl	74_37	+1	known	missense	c.4396	p.D1466Y	0.000	pfam_Collagen	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A5	HGNC	ENSG00000172752	tier1	-	-	136	0	0.00	48	4	7.69
COPB1	0	genome.wustl.edu	37	11	14486508	14486508	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	14486508	14486508	C	T	SNP	COPB1	ENST00000249923	human	ensembl	74_37	-1	known	missense	c.2359	p.A787T	1.000	pfam_Coatomer_bsu_C,pirsf_COPB1	pfam_Coatomer_bsu_C,pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold,pirsf_COPB1	-	no_errors	COPB1	HGNC	ENSG00000129083	tier1	-	-	87	0	0.00	70	9	11.39
CSF1R	0	genome.wustl.edu	37	5	149436898	149436898	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	149436898	149436898	G	T	SNP	CSF1R	ENST00000286301	human	ensembl	74_37	-1	known	missense	c.2271	p.H757Q	0.988	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	CSF1R	HGNC	ENSG00000182578	tier1	-	-	111	0	0.00	54	4	6.90
CSNK2B	0	genome.wustl.edu	37	6	31637232	31637232	+	Silent	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	6	31637232	31637232	C	T	SNP	CSNK2B	ENST00000375865	human	ensembl	74_37	+1	known	silent	c.504	p.F168	1.000	pfam_Casein_kinase_II_reg-sub,superfamily_Casein_kinase_II_reg-sub,prints_Casein_kinase_II_reg-sub	pfam_Casein_kinase_II_reg-sub,superfamily_Casein_kinase_II_reg-sub,prints_Casein_kinase_II_reg-sub	-	no_errors	CSNK2B	HGNC	ENSG00000204435	tier1	-	-	35	0	0.00	16	5	23.81
CSPG4P13	0	genome.wustl.edu	37	15	78196325	78196325	+	RNA	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	15	78196325	78196325	G	A	SNP	CSPG4P13	ENST00000565545	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.885	-	-	-	no_errors	CSPG4P13	HGNC	ENSG00000260139	tier1	-	-	149	0	0.00	66	34	34.00
CTNNB1	0	genome.wustl.edu	37	3	41266472	41266472	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	41266472	41266472	G	T	SNP	CTNNB1	ENST00000349496	human	ensembl	74_37	+1	known	missense	c.269	p.R90L	1.000	prints_Beta-catenin	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,prints_Beta-catenin	-	no_errors	CTNNB1	HGNC	ENSG00000168036	tier1	-	-	51	0	0.00	18	4	18.18
CTNS	0	genome.wustl.edu	37	17	3560044	3560044	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	3560044	3560044	G	T	SNP	CTNS	ENST00000381870	human	ensembl	74_37	+1	known	silent	c.636	p.A212	0.002	tigrfam_LC_transporter	smart_CTNS,tigrfam_LC_transporter	-	no_errors	CTNS	HGNC	ENSG00000040531				64	0	0.00	28	2	6.67
DAPP1	0	genome.wustl.edu	37	4	100784193	100784193	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	4	100784193	100784193	G	T	SNP	DAPP1	ENST00000512369	human	ensembl	74_37	+1	known	silent	c.564	p.L188	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_SH2,pfam_Pleckstrin_homology,smart_SH2,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_SH2,prints_SH2	-	no_errors	DAPP1	HGNC	ENSG00000070190	tier1	-	-	178	0	0.00	49	36	42.35
DCC	0	genome.wustl.edu	37	18	50936977	50936977	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	18	50936977	50936977	G	T	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	missense	c.3091	p.G1031W	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323	tier1	-	-	78	0	0.00	34	4	10.53
DCC	0	genome.wustl.edu	37	18	50731606	50731606	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	18	50731606	50731606	G	T	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	nonsense	c.1594	p.E532*	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323				41	0	0.00	30	3	9.09
DCDC1	0	genome.wustl.edu	37	11	31112992	31112992	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	31112992	31112992	T	C	SNP	DCDC1	ENST00000597505	human	ensembl	74_37	-1	putative	missense	c.2185	p.K729E	0.250	superfamily_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Doublecortin_dom,pfscan_Doublecortin_dom,pfscan_Ricin_B_lectin	-	no_errors	DCDC1	HGNC	ENSG00000170959	tier1	-	-	84	0	0.00	23	6	20.69
DCDC1	0	genome.wustl.edu	37	11	31128366	31128366	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	31128366	31128366	C	A	SNP	DCDC1	ENST00000597505	human	ensembl	74_37	-1	putative	missense	c.1729	p.V577F	1.000	NULL	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Doublecortin_dom,pfscan_Doublecortin_dom,pfscan_Ricin_B_lectin	-	no_errors	DCDC1	HGNC	ENSG00000170959	tier1	-	-	152	0	0.00	70	9	11.39
DDX59	0	genome.wustl.edu	37	1	200635444	200635444	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	200635444	200635444	T	-	DEL	DDX59	ENST00000331314	human	ensembl	74_37	-1	known	frame_shift_del	c.425	p.K142fs	0.005	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Znf_HIT,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX59	HGNC	ENSG00000118197	tier1			55	0	0.00	31	2	6.06
DMD	0	genome.wustl.edu	37	X	32382799	32382799	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	X	32382799	32382799	T	C	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.5054	p.D1685G	1.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	26	0	0.00	25	6	19.35
DNAAF2	0	genome.wustl.edu	37	14	50094817	50094817	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	14	50094817	50094817	G	T	SNP	DNAAF2	ENST00000298292	human	ensembl	74_37	-1	known	missense	c.1920	p.S640R	0.183	NULL	pfam_PIH	-	no_errors	DNAAF2	HGNC	ENSG00000165506				106	0	0.00	67	4	5.56
DNAH2	0	genome.wustl.edu	37	17	7727989	7727989	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	7727989	7727989	G	T	SNP	DNAH2	ENST00000389173	human	ensembl	74_37	+1	known	missense	c.11797	p.D3933Y	1.000	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH2	HGNC	ENSG00000183914	tier1	-	-	45	0	0.00	34	4	10.53
DNAH3	0	genome.wustl.edu	37	16	20975118	20975118	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	16	20975118	20975118	C	T	SNP	DNAH3	ENST00000261383	human	ensembl	74_37	-1	known	missense	c.10088	p.R3363H	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486	tier1	-	-	74	0	0.00	38	15	28.30
DNAH9	0	genome.wustl.edu	37	17	11809043	11809043	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	11809043	11809043	C	A	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	nonsense	c.11666	p.S3889*	0.990	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174	tier1	-	-	64	0	0.00	37	4	9.76
DNAJC2	0	genome.wustl.edu	37	7	102957429	102957429	+	Silent	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	102957429	102957429	C	T	SNP	DNAJC2	ENST00000379263	human	ensembl	74_37	-1	known	silent	c.1275	p.E425	1.000	NULL	pfam_SANT/Myb,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_Homeodomain-like,smart_DnaJ_domain,smart_SANT/Myb,pfscan_Myb-like_dom,pfscan_DnaJ_domain	-	no_errors	DNAJC2	HGNC	ENSG00000105821	tier1	-	-	55	0	0.00	25	6	19.35
DOCK1	0	genome.wustl.edu	37	10	129216774	129216774	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	10	129216774	129216774	C	T	SNP	DOCK1	ENST00000280333	human	ensembl	74_37	+1	known	missense	c.4598	p.A1533V	1.000	pfam_DOCK_C,superfamily_Cyt_c-like_dom	pfam_DOCK_C,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,superfamily_Cyt_c-like_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK1	HGNC	ENSG00000150760	tier1	-	-	77	0	0.00	36	4	10.00
DPP10	0	genome.wustl.edu	37	2	116485404	116485404	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	116485404	116485404	G	T	SNP	DPP10	ENST00000393147	human	ensembl	74_37	+1	known	nonsense	c.601	p.E201*	1.000	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	DPP10	HGNC	ENSG00000175497				90	0	0.00	31	2	6.06
DPPA2	0	genome.wustl.edu	37	3	109027896	109027896	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	109027896	109027896	G	A	SNP	DPPA2	ENST00000478945	human	ensembl	74_37	-1	known	missense	c.373	p.H125Y	0.141	pfscan_SAP_dom	pfscan_SAP_dom	-	no_errors	DPPA2	HGNC	ENSG00000163530	tier1	-	-	74	0	0.00	23	9	28.12
DSCR3	0	genome.wustl.edu	37	21	38639762	38639763	+	RNA	INS	-	-	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	21	38639762	38639763	-	C	INS	DSCR3	ENST00000399000	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.001	-	-	-	no_errors	DSCR3	HGNC	ENSG00000157538	tier1			18	0	0.00	5	2	28.57
DZANK1	0	genome.wustl.edu	37	20	18370413	18370413	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	20	18370413	18370413	C	A	SNP	DZANK1	ENST00000262547	human	ensembl	74_37	-1	known	missense	c.1950	p.M650I	0.993	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DZANK1	HGNC	ENSG00000089091	tier1	-	-	43	0	0.00	33	4	10.53
EBPL	0	genome.wustl.edu	37	13	50235205	50235205	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	13	50235205	50235205	C	A	SNP	EBPL	ENST00000242827	human	ensembl	74_37	-1	known	missense	c.520	p.G174C	1.000	pfam_EBP	pfam_EBP	-	no_errors	EBPL	HGNC	ENSG00000123179				66	0	0.00	25	2	7.41
EIF4G3	0	genome.wustl.edu	37	1	21324111	21324111	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	21324111	21324111	G	T	SNP	EIF4G3	ENST00000356916	human	ensembl	74_37	-1	known	silent	c.46	p.R16	1.000	NULL	NULL	-	no_errors	EIF4G3	HGNC	ENSG00000075151				77	0	0.00	56	4	6.67
EMC1	0	genome.wustl.edu	37	1	19547286	19547286	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	19547286	19547286	G	T	SNP	EMC1	ENST00000477853	human	ensembl	74_37	-1	known	missense	c.2644	p.R882S	1.000	pfam_DUF1620	pfam_DUF1620,superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	EMC1	HGNC	ENSG00000127463				84	0	0.00	35	2	5.41
EML1	0	genome.wustl.edu	37	14	100361061	100361061	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	14	100361061	100361061	G	T	SNP	EML1	ENST00000334192	human	ensembl	74_37	+1	known	nonsense	c.700	p.E234*	1.000	pfam_HELP,superfamily_Quinonprotein_ADH-like_supfam	pfam_HELP,pfam_WD40_repeat,superfamily_Quinonprotein_ADH-like_supfam,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML1	HGNC	ENSG00000066629				104	0	0.00	76	4	5.00
ENSG00000167765	0	genome.wustl.edu	37	19	52096164	52096164	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	52096164	52096164	G	T	SNP	ENSG00000167765	ENST00000301439	human	ensembl	74_37	-1	known	missense	c.514	p.P172T	0.001	NULL	NULL	-	no_errors	AC018755.1	Clone_based_ensembl_gene	ENSG00000167765	tier1	-	-	97	0	0.00	28	27	49.09
ENSG00000212032	0	genome.wustl.edu	37	X	120466463	120466463	+	RNA	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	X	120466463	120466463	C	T	SNP	ENSG00000212032	ENST00000390743	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	AC007486.1	Clone_based_ensembl_gene	ENSG00000212032	tier1	-	-	37	0	0.00	22	9	29.03
ENSG00000227495	0	genome.wustl.edu	37	17	4922558	4922558	+	RNA	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	4922558	4922558	C	A	SNP	ENSG00000227495	ENST00000438266	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.020	-	-	-	no_errors	AC109333.10	Clone_based_vega_gene	ENSG00000227495	tier1	-	-	47	0	0.00	21	3	12.50
ENSG00000267270	0	genome.wustl.edu	37	18	77906059	77906059	+	Silent	SNP	G	G	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	18	77906059	77906059	G	C	SNP	ENSG00000267270	ENST00000586421	human	ensembl	74_37	+1	putative	silent	c.18	p.L6	0.005	NULL	NULL	-	no_errors	AC139100.2	Clone_based_vega_gene	ENSG00000267270	tier1	-	-	49	0	0.00	19	8	29.63
ENSG00000267724	0	genome.wustl.edu	37	18	44634276	44634276	+	RNA	SNP	T	T	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	18	44634276	44634276	T	C	SNP	ENSG00000267724	ENST00000591183	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-49K24.8	Clone_based_vega_gene	ENSG00000267724	tier1	-	-	95	0	0.00	40	6	13.04
ENSG00000271894	0	genome.wustl.edu	37	2	56612244	56612244	+	RNA	SNP	T	T	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	56612244	56612244	T	A	SNP	ENSG00000271894	ENST00000607540	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	RP11-482H16.1	Clone_based_vega_gene	ENSG00000271894	tier1	-	-	47	0	0.00	6	6	50.00
EPC1	0	genome.wustl.edu	37	10	32575675	32575675	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	10	32575675	32575675	G	T	SNP	EPC1	ENST00000263062	human	ensembl	74_37	-1	known	silent	c.1338	p.T446	0.726	NULL	pfam_Enhancer_polycomb_C,pfam_Enhancer_polycomb-like_N	-	no_errors	EPC1	HGNC	ENSG00000120616	tier1	-	-	92	0	0.00	67	4	5.63
EPHB4	0	genome.wustl.edu	37	7	100419977	100419977	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	100419977	100419977	C	A	SNP	EPHB4	ENST00000358173	human	ensembl	74_37	-1	known	missense	c.724	p.D242Y	1.000	pirsf_Tyr_kinase_ephrin_rcpt	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Kinase-like_dom,superfamily_Galactose-bd-like,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB4	HGNC	ENSG00000196411	tier1	-	-	58	0	0.00	26	10	27.78
ERVH48-1	0	genome.wustl.edu	37	21	44338539	44338539	+	RNA	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	21	44338539	44338539	G	A	SNP	ERVH48-1	ENST00000447535	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	ERVH48-1	HGNC	ENSG00000233056	tier1	-	-	20	0	0.00	6	3	33.33
ERVW-1	0	genome.wustl.edu	37	7	92098694	92098694	+	Silent	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	92098694	92098694	A	G	SNP	ERVW-1	ENST00000493463	human	ensembl	74_37	-1	known	silent	c.1002	p.G334	0.357	pfam_TLV/ENV_coat_polyprotein	pfam_TLV/ENV_coat_polyprotein	-	no_errors	ERVW-1	HGNC	ENSG00000242950	tier1	-	-	72	0	0.00	24	19	44.19
ESX1	0	genome.wustl.edu	37	X	103499092	103499092	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	X	103499092	103499092	C	A	SNP	ESX1	ENST00000372588	human	ensembl	74_37	-1	known	missense	c.249	p.E83D	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_POU	-	no_errors	ESX1	HGNC	ENSG00000123576				14	0	0.00	9	3	25.00
ESYT3	0	genome.wustl.edu	37	3	138191476	138191476	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	138191476	138191476	G	T	SNP	ESYT3	ENST00000389567	human	ensembl	74_37	+1	known	missense	c.2012	p.S671I	0.999	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,prints_C2_dom,pfscan_C2_dom	-	no_errors	ESYT3	HGNC	ENSG00000158220	tier1	-	-	61	0	0.00	35	4	10.26
FAM184A	0	genome.wustl.edu	37	6	119345270	119345270	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	6	119345270	119345270	C	A	SNP	FAM184A	ENST00000338891	human	ensembl	74_37	-1	known	nonsense	c.868	p.E290*	1.000	NULL	superfamily_Prefoldin	-	no_errors	FAM184A	HGNC	ENSG00000111879				70	0	0.00	30	2	6.25
FAM230C	0	genome.wustl.edu	37	22	21663201	21663201	+	RNA	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	22	21663201	21663201	A	G	SNP	FAM230C	ENST00000436681	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.096	-	-	-	no_errors	KB-1183D5.13	Clone_based_vega_gene	ENSG00000206142	tier1	-	-	8	0	0.00	5	4	44.44
FANCD2	0	genome.wustl.edu	37	3	10108913	10108913	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	10108913	10108913	G	T	SNP	FANCD2	ENST00000287647	human	ensembl	74_37	+1	known	missense	c.2406	p.Q802H	0.852	NULL	superfamily_ARM-type_fold	-	no_errors	FANCD2	HGNC	ENSG00000144554				56	0	0.00	26	2	7.14
FARP1	0	genome.wustl.edu	37	13	99063029	99063029	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	13	99063029	99063029	G	T	SNP	FARP1	ENST00000376586	human	ensembl	74_37	+1	known	silent	c.1644	p.V548	0.023	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_FERM_PH-like_C,pfam_FERM_N,pfam_FERM-adjacent,pfam_FERM_central,superfamily_DH-domain,superfamily_FERM_central,smart_Band_41_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_FERM_domain,pfscan_Pleckstrin_homology,pfscan_DH-domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FARP1	HGNC	ENSG00000152767	tier1	-	-	65	0	0.00	43	4	8.51
FAT4	0	genome.wustl.edu	37	4	126336313	126336313	+	Silent	SNP	T	T	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	4	126336313	126336313	T	C	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	silent	c.6195	p.I2065	0.874	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	tier1	-	-	59	0	0.00	19	7	26.92
FBXO15	0	genome.wustl.edu	37	18	71740731	71740731	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	18	71740731	71740731	C	T	SNP	FBXO15	ENST00000419743	human	ensembl	74_37	-1	known	missense	c.1498	p.A500T	0.008	NULL	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO15	HGNC	ENSG00000141665	tier1	-	-	69	0	0.00	23	5	17.86
FDFT1	0	genome.wustl.edu	37	8	11666396	11666396	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	8	11666396	11666396	A	G	SNP	FDFT1	ENST00000220584	human	ensembl	74_37	+1	known	missense	c.193	p.M65V	1.000	pfam_Squ/phyt_synthse,superfamily_Terpenoid_synth,tigrfam_Squal_synth	pfam_Squ/phyt_synthse,superfamily_Terpenoid_synth,tigrfam_Squal_synth	-	no_errors	FDFT1	HGNC	ENSG00000079459				54	0	0.00	17	5	22.73
FER1L6	0	genome.wustl.edu	37	8	125115512	125115512	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	8	125115512	125115512	C	A	SNP	FER1L6	ENST00000399018	human	ensembl	74_37	+1	known	missense	c.5251	p.R1751S	0.999	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,superfamily_C2_dom,superfamily_ABC1_TM_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	FER1L6	HGNC	ENSG00000214814				67	0	0.00	52	4	7.02
FHOD1	0	genome.wustl.edu	37	16	67265688	67265688	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	16	67265688	67265688	C	T	SNP	FHOD1	ENST00000258201	human	ensembl	74_37	-1	known	missense	c.2237	p.R746Q	0.972	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,superfamily_ARM-type_fold,smart_FH2_Formin	-	no_errors	FHOD1	HGNC	ENSG00000135723	tier1	-	-	40	0	0.00	17	9	34.62
FOXP2	0	genome.wustl.edu	37	7	114269985	114269985	+	Silent	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	114269985	114269985	A	G	SNP	FOXP2	ENST00000408937	human	ensembl	74_37	+1	known	silent	c.597	p.Q199	0.894	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXP2	HGNC	ENSG00000128573				45	0	0.00	15	2	11.76
GAB4	0	genome.wustl.edu	37	22	17443733	17443733	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	22	17443733	17443733	C	G	SNP	GAB4	ENST00000400588	human	ensembl	74_37	-1	known	missense	c.1615	p.V539L	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	GAB4	HGNC	ENSG00000215568				37	0	0.00	18	4	18.18
GABBR1	0	genome.wustl.edu	37	6	29588992	29588992	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	6	29588992	29588992	G	T	SNP	GABBR1	ENST00000377034	human	ensembl	74_37	-1	known	silent	c.1209	p.I403	0.998	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Sushi_SCR_CCP,superfamily_Peripla_BP_I,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,prints_GPCR_3_GABA_rcpt_B,prints_GPCR_3_GABA_rcpt_B1,pfscan_Sushi_SCR_CCP,pfscan_GPCR_3_C	-	no_errors	GABBR1	HGNC	ENSG00000204681	tier1	-	-	58	0	0.00	36	8	18.18
GART	0	genome.wustl.edu	37	21	34894556	34894556	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	21	34894556	34894556	G	T	SNP	GART	ENST00000381815	human	ensembl	74_37	-1	known	silent	c.1332	p.I444	0.997	superfamily_PurM_N-like,tigrfam_PurM_cligase	pfam_PRibGlycinamid_synth_ATP-grasp,pfam_Formyl_transf_N,pfam_PRibGlycinamide_synth_N,pfam_AIR_synth_C_dom,pfam_PRibGlycinamide_synth_C-dom,pfam_AIR_synth_N_dom,pfam_ATP-grasp_carboxylate-amine,pfam_CbamoylP_synth_lsu-like_ATP-bd,superfamily_Formyl_transf_N,superfamily_AIR_synth_C_dom,superfamily_PurM_N-like,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,pfscan_ATP-grasp,tigrfam_PRibGlycinamide_synth,tigrfam_PurM_cligase,tigrfam_PurN_trans	-	no_errors	GART	HGNC	ENSG00000159131				90	0	0.00	26	3	10.34
GBP1	0	genome.wustl.edu	37	1	89521730	89521730	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	89521730	89521730	T	-	DEL	GBP1	ENST00000370473	human	ensembl	74_37	-1	known	frame_shift_del	c.1337	p.K446fs	0.036	pfam_Guanylate-bd_C,superfamily_Guanylate-bd_C	pfam_Guanylate-bd_C,pfam_Guanylate-bd_N,superfamily_Guanylate-bd_C,superfamily_P-loop_NTPase	-	no_errors	GBP1	HGNC	ENSG00000117228	tier1			243	0	0.00	130	38	22.62
GIGYF2	0	genome.wustl.edu	37	2	233697612	233697612	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	233697612	233697612	C	A	SNP	GIGYF2	ENST00000373566	human	ensembl	74_37	+1	known	missense	c.2641	p.R881S	1.000	NULL	pfam_GYF,superfamily_GYF,smart_GYF,pfscan_GYF	-	no_errors	GIGYF2	HGNC	ENSG00000204120	tier1	-	-	139	0	0.00	71	4	5.33
GIPC1	0	genome.wustl.edu	37	19	14593663	14593664	+	Frame_Shift_Ins	INS	-	-	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	14593663	14593664	0	C	INS	GIPC1	ENST00000345425	human	ensembl	74_37	-1	known	frame_shift_ins	c.126_125	p.Q44fs	0.668:0.951	pirsf_UCP038083_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pirsf_UCP038083_PDZ,pfscan_PDZ	-	no_errors	GIPC1	HGNC	ENSG00000123159				15	0	0.00	4	2	33.33
GNAQ	0	genome.wustl.edu	37	9	80430560	80430560	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	9	80430560	80430560	C	T	SNP	GNAQ	ENST00000286548	human	ensembl	74_37	-1	known	missense	c.448	p.E150K	1.000	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_Q,prints_Fungi_Gprotein_alpha	-	no_errors	GNAQ	HGNC	ENSG00000156052	tier1	-	-	89	0	0.00	26	12	31.58
GOLGA3	0	genome.wustl.edu	37	12	133372506	133372506	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	133372506	133372506	C	T	SNP	GOLGA3	ENST00000204726	human	ensembl	74_37	-1	known	missense	c.2401	p.E801K	1.000	NULL	superfamily_Prefoldin	-	no_errors	GOLGA3	HGNC	ENSG00000090615	tier1	-	-	41	0	0.00	11	5	31.25
GPR21	0	genome.wustl.edu	37	9	125796992	125796992	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	9	125796992	125796992	G	T	SNP	GPR21	ENST00000373642	human	ensembl	74_37	+1	known	silent	c.147	p.V49	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR21	HGNC	ENSG00000188394	tier1	-	-	50	0	0.00	21	3	12.50
GPR52	0	genome.wustl.edu	37	1	174417375	174417375	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	174417375	174417375	C	G	SNP	GPR52	ENST00000367685	human	ensembl	74_37	+1	known	missense	c.126	p.F42L	0.990	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR52	HGNC	ENSG00000203737	tier1	-	-	60	0	0.00	37	8	17.39
GRIP2	0	genome.wustl.edu	37	3	14567437	14567437	+	RNA	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	14567437	14567437	G	A	SNP	GRIP2	ENST00000273083	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GRIP2	HGNC	ENSG00000144596	tier1	-	-	34	0	0.00	8	6	42.86
HAO1	0	genome.wustl.edu	37	20	7894903	7894903	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	20	7894903	7894903	G	T	SNP	HAO1	ENST00000378789	human	ensembl	74_37	-1	known	silent	c.453	p.G151	0.970	pfam_FMN-dep_DH,pirsf_Alpha-hydoxy_acid_DH_FMN	pfam_FMN-dep_DH,pfam_Glu_synth_centr_C,pirsf_Alpha-hydoxy_acid_DH_FMN	-	no_errors	HAO1	HGNC	ENSG00000101323	tier1	-	-	80	0	0.00	45	6	11.76
HELB	0	genome.wustl.edu	37	12	66716526	66716526	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	66716526	66716526	G	A	SNP	HELB	ENST00000247815	human	ensembl	74_37	+1	known	missense	c.2260	p.D754N	1.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	HELB	HGNC	ENSG00000127311	tier1	-	-	70	0	0.00	27	15	35.71
HELZ	0	genome.wustl.edu	37	17	65190128	65190128	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	65190128	65190128	G	T	SNP	HELZ	ENST00000358691	human	ensembl	74_37	-1	known	missense	c.512	p.P171Q	1.000	NULL	pfam_Znf_CCCH,superfamily_P-loop_NTPase,smart_Znf_CCCH	-	no_errors	HELZ	HGNC	ENSG00000198265	tier1	-	-	75	0	0.00	47	4	7.84
HEPHL1	0	genome.wustl.edu	37	11	93779036	93779036	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	93779036	93779036	C	A	SNP	HEPHL1	ENST00000315765	human	ensembl	74_37	+1	known	missense	c.368	p.P123H	0.273	pfam_Cu-oxidase_3,superfamily_Cupredoxin	pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Cupredoxin	-	no_errors	HEPHL1	HGNC	ENSG00000181333	tier1	-	-	95	0	0.00	62	4	6.06
HERC2P3	0	genome.wustl.edu	37	15	20613980	20613980	+	RNA	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	15	20613980	20613980	G	T	SNP	HERC2P3	ENST00000430598	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.978	-	-	-	no_errors	HERC2P3	HGNC	ENSG00000180229	tier1	-	-	79	0	0.00	59	5	7.81
HMCN1	0	genome.wustl.edu	37	1	185902946	185902946	+	Silent	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	185902946	185902946	C	G	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	silent	c.1818	p.L606	0.901	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	110	0	0.00	46	11	19.30
IDE	0	genome.wustl.edu	37	10	94274767	94274767	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	10	94274767	94274767	G	T	SNP	IDE	ENST00000265986	human	ensembl	74_37	-1	known	missense	c.694	p.Q232K	1.000	superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	IDE	HGNC	ENSG00000119912	tier1	-	-	102	0	0.00	53	4	7.02
IDO1	0	genome.wustl.edu	37	8	39785379	39785379	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	8	39785379	39785379	G	C	SNP	IDO1	ENST00000518237	human	ensembl	74_37	+1	known	missense	c.887	p.R296T	0.997	pfam_Indolamine_dOase	pfam_Indolamine_dOase	-	no_errors	IDO1	HGNC	ENSG00000131203	tier1	-	-	65	0	0.00	39	9	18.75
IFNA7	0	genome.wustl.edu	37	9	21201640	21201640	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	9	21201640	21201640	G	T	SNP	IFNA7	ENST00000239347	human	ensembl	74_37	-1	known	missense	c.525	p.F175L	0.001	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta	pfam_Interferon_alpha/beta/delta,superfamily_4_helix_cytokine-like_core,smart_Interferon_alpha/beta/delta,prints_Interferon_alpha/beta/delta	-	no_errors	IFNA7	HGNC	ENSG00000214042	tier1	-	-	152	0	0.00	68	4	5.56
IGFN1	0	genome.wustl.edu	37	1	201183353	201183353	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	201183353	201183353	C	A	SNP	IGFN1	ENST00000335211	human	ensembl	74_37	+1	known	missense	c.8777	p.P2926Q	0.007	pfam_Ig_I-set,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGFN1	HGNC	ENSG00000163395				43	0	0.00	33	2	5.71
IL5RA	0	genome.wustl.edu	37	3	3139822	3139822	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	3139822	3139822	T	A	SNP	IL5RA	ENST00000256452	human	ensembl	74_37	-1	known	missense	c.520	p.R174W	0.981	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	-	no_errors	IL5RA	HGNC	ENSG00000091181	tier1	-	-	116	0	0.00	16	25	60.98
INHBE	0	genome.wustl.edu	37	12	57849605	57849605	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	57849605	57849605	G	T	SNP	INHBE	ENST00000266646	human	ensembl	74_37	+1	known	missense	c.286	p.A96S	1.000	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_betaC,prints_Inhibin_asu	-	no_errors	INHBE	HGNC	ENSG00000139269	tier1	-	-	39	0	0.00	13	3	18.75
ITGA6	0	genome.wustl.edu	37	2	173338951	173338951	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	173338951	173338951	C	T	SNP	ITGA6	ENST00000264106	human	ensembl	74_37	+1	known	missense	c.1061	p.S354L	1.000	smart_Int_alpha_beta-p,prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA6	HGNC	ENSG00000091409	tier1	-	-	72	0	0.00	21	5	19.23
ITGAV	0	genome.wustl.edu	37	2	187516791	187516791	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	187516791	187516791	C	T	SNP	ITGAV	ENST00000261023	human	ensembl	74_37	+1	known	missense	c.1480	p.P494S	0.997	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGAV	HGNC	ENSG00000138448	tier1	-	-	78	0	0.00	37	4	9.76
ITPKB	0	genome.wustl.edu	37	1	226822416	226822416	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	226822416	226822416	C	T	SNP	ITPKB	ENST00000272117	human	ensembl	74_37	-1	known	missense	c.2797	p.V933I	1.000	pfam_IPK	pfam_IPK	-	no_errors	ITPKB	HGNC	ENSG00000143772	tier1	-	-	52	0	0.00	34	4	10.53
KCNH4	0	genome.wustl.edu	37	17	40321642	40321642	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	40321642	40321642	C	A	SNP	KCNH4	ENST00000264661	human	ensembl	74_37	-1	known	missense	c.1443	p.M481I	1.000	NULL	pfam_Ion_trans_dom,pfam_2pore_dom_K_chnl_dom,pfam_PAS_fold_3,pfam_PAS_fold,pfam_PAS_4,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,superfamily_PAS,smart_PAC,smart_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG,prints_K_chnl_volt-dep_ELK,prints_K_chnl_volt-dep_ERG,pfscan_cNMP-bd_dom,pfscan_PAS,pfscan_PAS-assoc_C,tigrfam_PAS	-	no_errors	KCNH4	HGNC	ENSG00000089558	tier1	-	-	61	0	0.00	35	4	10.26
KCNIP3	0	genome.wustl.edu	37	2	95963122	95963122	+	RNA	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	95963122	95963122	G	T	SNP	KCNIP3	ENST00000377181	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	KCNIP3	HGNC	ENSG00000115041	tier1	-	-	206	0	0.00	76	5	6.17
KDM4A	0	genome.wustl.edu	37	1	44134920	44134920	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	44134920	44134920	G	T	SNP	KDM4A	ENST00000372396	human	ensembl	74_37	+1	known	missense	c.1313	p.R438M	1.000	NULL	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4A	HGNC	ENSG00000066135	tier1	-	-	85	0	0.00	52	4	7.14
KDM5B	0	genome.wustl.edu	37	1	202742369	202742369	+	Silent	SNP	T	T	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	202742369	202742369	T	C	SNP	KDM5B	ENST00000367264	human	ensembl	74_37	-1	known	silent	c.453	p.K151	1.000	pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	pfam_Lys_sp_deMease_like_dom,pfam_JmjC_dom,pfam_Znf_PHD-finger,pfam_ARID/BRIGHT_DNA-bd,pfam_Znf_C5HC2,pfam_TF_JmjN,superfamily_ARID/BRIGHT_DNA-bd,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_ARID/BRIGHT_DNA-bd,smart_Znf_PHD,smart_JmjC_dom,pfscan_TF_JmjN,pfscan_JmjC_dom,pfscan_Znf_PHD-finger,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	KDM5B	HGNC	ENSG00000117139	tier1	-	-	56	0	0.00	17	12	41.38
KIAA1107	0	genome.wustl.edu	37	1	92643979	92643979	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	92643979	92643979	G	A	SNP	KIAA1107	ENST00000409154	human	ensembl	74_37	+1	known	missense	c.1403	p.S468N	0.715	NULL	NULL	-	no_errors	KIAA1107	HGNC	ENSG00000069712	tier1	-	-	98	0	0.00	46	28	37.84
KIAA1549	0	genome.wustl.edu	37	7	138522658	138522658	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	138522658	138522658	T	C	SNP	KIAA1549	ENST00000422774	human	ensembl	74_37	-1	known	missense	c.5846	p.H1949R	1.000	NULL	NULL	-	no_errors	KIAA1549	HGNC	ENSG00000122778				54	0	0.00	29	4	12.12
KIDINS220	0	genome.wustl.edu	37	2	8943200	8943200	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	8943200	8943200	C	A	SNP	KIDINS220	ENST00000256707	human	ensembl	74_37	-1	known	nonsense	c.661	p.E221*	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_KAP_NTPase,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KIDINS220	HGNC	ENSG00000134313				53	0	0.00	16	3	15.79
KIF2B	0	genome.wustl.edu	37	17	51901127	51901127	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	51901127	51901127	A	T	SNP	KIF2B	ENST00000268919	human	ensembl	74_37	+1	known	missense	c.733	p.M245L	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF2B	HGNC	ENSG00000141200	tier1	-	-	62	0	0.00	29	5	14.71
KLK1	0	genome.wustl.edu	37	19	51324991	51324991	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	51324991	51324991	G	T	SNP	KLK1	ENST00000301420	human	ensembl	74_37	-1	known	silent	c.183	p.L61	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	KLK1	HGNC	ENSG00000167748	tier1	-	-	94	0	0.00	20	4	16.67
KLRF2	0	genome.wustl.edu	37	12	10048295	10048295	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	10048295	10048295	G	T	SNP	KLRF2	ENST00000535540	human	ensembl	74_37	+1	known	missense	c.487	p.V163L	0.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin,prints_AntifreezeII	-	no_errors	KLRF2	HGNC	ENSG00000256797	tier1	-	-	74	0	0.00	49	4	7.55
KMT2D	0	genome.wustl.edu	37	12	49435318	49435318	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	49435318	49435318	G	T	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.6235	p.Q2079K	1.000	smart_HMG_box_dom	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	45	0	0.00	27	4	12.90
KNCN	0	genome.wustl.edu	37	1	47015625	47015625	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	47015625	47015625	G	T	SNP	KNCN	ENST00000481882	human	ensembl	74_37	-1	known	missense	c.201	p.D67E	0.976	NULL	NULL	-	no_errors	KNCN	HGNC	ENSG00000162456	tier1	-	-	37	0	0.00	15	7	31.82
KRT42P	0	genome.wustl.edu	37	17	39785011	39785011	+	RNA	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	39785011	39785011	G	A	SNP	KRT42P	ENST00000438131	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KRT42P	HGNC	ENSG00000214514	tier1	-	-	133	0	0.00	46	12	20.69
LATS2	0	genome.wustl.edu	37	13	21562128	21562128	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	13	21562128	21562128	G	T	SNP	LATS2	ENST00000382592	human	ensembl	74_37	-1	known	nonsense	c.1791	p.Y597*	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	LATS2	HGNC	ENSG00000150457	tier1	-	-	104	0	0.00	39	4	9.30
LDHAL6A	0	genome.wustl.edu	37	11	18500366	18500366	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	18500366	18500366	G	T	SNP	LDHAL6A	ENST00000280706	human	ensembl	74_37	+1	known	missense	c.948	p.L316F	0.575	pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C,pirsf_L-lactate/malate_DH,tigrfam_L-lactate_DH	pfam_Lactate/malate_DH_N,pfam_Lactate/malate_DH_C,superfamily_Lactate_DH/Glyco_Ohase_4_C,pirsf_L-lactate/malate_DH,prints_L-lactate/malate_DH,tigrfam_L-lactate_DH	-	no_errors	LDHAL6A	HGNC	ENSG00000166800	tier1	-	-	106	0	0.00	61	4	6.15
LGALS3	0	genome.wustl.edu	37	14	55604782	55604782	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	14	55604782	55604782	G	T	SNP	LGALS3	ENST00000254301	human	ensembl	74_37	+1	known	missense	c.38	p.G13V	1.000	NULL	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	-	no_errors	LGALS3	HGNC	ENSG00000131981	tier1	-	-	43	0	0.00	25	4	13.33
LGR5	0	genome.wustl.edu	37	12	71978061	71978061	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	71978061	71978061	G	T	SNP	LGR5	ENST00000266674	human	ensembl	74_37	+1	known	missense	c.2271	p.E757D	0.913	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_Leu-rich_rpt,pfam_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	LGR5	HGNC	ENSG00000139292	tier1	-	-	72	0	0.00	54	4	6.90
LHFPL5	0	genome.wustl.edu	37	6	35787239	35787239	+	RNA	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	6	35787239	35787239	C	T	SNP	LHFPL5	ENST00000496656	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	LHFPL5	HGNC	ENSG00000197753	tier1	-	-	90	0	0.00	44	9	16.98
LIG1	0	genome.wustl.edu	37	19	48640270	48640270	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	48640270	48640270	G	T	SNP	LIG1	ENST00000263274	human	ensembl	74_37	-1	known	silent	c.1326	p.I442	0.986	pfam_DNA_ligase_ATP-dep_N,superfamily_DNA_ligase_ATP-dep_N,tigrfam_DNA_ligase_ATP-dep	pfam_DNA_ligase_ATP-dep_cent,pfam_DNA_ligase_ATP-dep_N,pfam_DNA_ligase_ATP-dep_C,superfamily_DNA_ligase_ATP-dep_N,superfamily_NA-bd_OB-fold,pfscan_DNA_ligase_ATP-dep_cent,tigrfam_DNA_ligase_ATP-dep	-	no_errors	LIG1	HGNC	ENSG00000105486	tier1	-	-	72	0	0.00	37	4	9.76
LINC00029	0	genome.wustl.edu	37	20	61665949	61665949	+	RNA	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	20	61665949	61665949	A	G	SNP	LINC00029	ENST00000370341	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	LINC00029	HGNC	ENSG00000125514	tier1	-	-	61	0	0.00	48	4	7.69
LOC101927601	0	genome.wustl.edu	37	15	82637293	82637293	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	15	82637293	82637293	A	G	SNP	LOC101927601	ENST00000439287	human	ensembl	74_37	-1	known	missense	c.793	p.C265R	0.000	NULL	NULL	-	no_errors	GOLGA6L10	Uniprot_gn	ENSG00000205281	tier1	-	-	37	0	0.00	10	2	16.67
LOC101930578	0	genome.wustl.edu	37	13	52857389	52857389	+	RNA	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	13	52857389	52857389	G	A	SNP	LOC101930578	ENST00000451298	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-248G5.8	Clone_based_vega_gene	ENSG00000217576	tier1	-	-	116	0	0.00	99	24	19.51
LOC253044	0	genome.wustl.edu	37	15	77938714	77938714	+	RNA	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	15	77938714	77938714	G	T	SNP	LOC253044	ENST00000558887	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.025	-	-	-	no_errors	RP11-307C19.3	Clone_based_vega_gene	ENSG00000259666	tier1	-	-	65	0	0.00	51	4	7.27
LRCH2	0	genome.wustl.edu	37	X	114398259	114398259	+	Silent	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	X	114398259	114398259	C	T	SNP	LRCH2	ENST00000317135	human	ensembl	74_37	-1	known	silent	c.1443	p.L481	1.000	superfamily_NA-bd_OB-fold	pfam_Leu-rich_rpt,pfam_CH-domain,superfamily_CH-domain,superfamily_NA-bd_OB-fold,smart_Leu-rich_rpt_typical-subtyp,smart_CH-domain,pfscan_CH-domain	-	no_errors	LRCH2	HGNC	ENSG00000130224	tier1	-	-	67	0	0.00	38	18	31.58
LRRC27	0	genome.wustl.edu	37	10	134174993	134174993	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	10	134174993	134174993	G	T	SNP	LRRC27	ENST00000368613	human	ensembl	74_37	+1	known	silent	c.1203	p.L401	0.001	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC27	HGNC	ENSG00000148814	tier1	-	-	42	0	0.00	37	4	9.76
LRRC57	0	genome.wustl.edu	37	15	42840557	42840557	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	15	42840557	42840557	G	T	SNP	LRRC57	ENST00000323443	human	ensembl	74_37	-1	known	missense	c.76	p.L26M	0.997	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC57	HGNC	ENSG00000180979				93	0	0.00	54	4	6.90
LRRC7	0	genome.wustl.edu	37	1	70484450	70484450	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	70484450	70484450	C	A	SNP	LRRC7	ENST00000035383	human	ensembl	74_37	+1	known	missense	c.1255	p.Q419K	1.000	NULL	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	LRRC7	HGNC	ENSG00000033122	tier1	-	-	118	0	0.00	64	11	14.67
LRRC9	0	genome.wustl.edu	37	14	60448632	60448632	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	14	60448632	60448632	G	T	SNP	LRRC9	ENST00000254271	human	ensembl	74_37	+1	known	nonsense	c.1945	p.E649*	0.962	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC9	HGNC	ENSG00000131951	tier1	-	-	116	0	0.00	71	4	5.33
MAP1B	0	genome.wustl.edu	37	5	71482557	71482557	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	71482557	71482557	C	G	SNP	MAP1B	ENST00000296755	human	ensembl	74_37	+1	known	missense	c.486	p.F162L	1.000	NULL	pfam_MAP1B_neuraxin	-	no_errors	MAP1B	HGNC	ENSG00000131711	tier1	-	-	54	0	0.00	14	7	33.33
MAP3K14	0	genome.wustl.edu	37	17	43348439	43348439	+	RNA	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	43348439	43348439	G	A	SNP	MAP3K14	ENST00000344686	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.802	-	-	-	no_errors	MAP3K14	HGNC	ENSG00000006062				64	0	0.00	26	4	13.33
MAP7D2	0	genome.wustl.edu	37	X	20043083	20043083	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	X	20043083	20043083	C	A	SNP	MAP7D2	ENST00000379643	human	ensembl	74_37	-1	known	missense	c.1398	p.K466N	1.000	pfam_MAP7	pfam_MAP7	-	no_errors	MAP7D2	HGNC	ENSG00000184368	tier1	-	-	27	0	0.00	20	5	20.00
MAP9	0	genome.wustl.edu	37	4	156283237	156283237	+	Silent	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	4	156283237	156283237	A	G	SNP	MAP9	ENST00000311277	human	ensembl	74_37	-1	known	silent	c.765	p.S255	0.000	NULL	NULL	-	no_errors	MAP9	HGNC	ENSG00000164114	tier1	-	-	78	0	0.00	25	3	10.71
MAPK1	0	genome.wustl.edu	37	22	22127181	22127181	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	22	22127181	22127181	T	C	SNP	MAPK1	ENST00000215832	human	ensembl	74_37	-1	known	missense	c.947	p.Y316C	1.000	superfamily_Kinase-like_dom,prints_MAPK_ERK1/2	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_ERK1/2,prints_MAPK_ERK3/4	-	no_errors	MAPK1	HGNC	ENSG00000100030	tier1	-	-	80	0	0.00	58	8	12.12
MAPKBP1	0	genome.wustl.edu	37	15	42106776	42106776	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	15	42106776	42106776	A	G	SNP	MAPKBP1	ENST00000456763	human	ensembl	74_37	+1	known	missense	c.1027	p.R343G	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	MAPKBP1	HGNC	ENSG00000137802	tier1	-	-	82	0	0.00	41	6	12.77
MARCH1	0	genome.wustl.edu	37	4	164466807	164466807	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	4	164466807	164466807	C	A	SNP	MARCH1	ENST00000274056	human	ensembl	74_37	-1	known	missense	c.512	p.W171L	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	MARCH1	HGNC	ENSG00000145416	tier1	-	-	68	0	0.00	19	5	20.83
MARCH10	0	genome.wustl.edu	37	17	60865948	60865948	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	60865948	60865948	G	A	SNP	MARCH10	ENST00000311269	human	ensembl	74_37	-1	known	nonsense	c.103	p.R35*	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH	-	no_errors	MARCH10	HGNC	ENSG00000173838	tier1	rs200814272	-	77	0	0.00	36	8	17.78
MARCH2	0	genome.wustl.edu	37	19	8491528	8491528	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	8491528	8491528	C	T	SNP	MARCH2	ENST00000215555	human	ensembl	74_37	+1	known	missense	c.212	p.A71V	0.824	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	MARCH2	HGNC	ENSG00000099785				88	0	0.00	35	4	10.26
MARK1	0	genome.wustl.edu	37	1	220808825	220808825	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	220808825	220808825	G	T	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	missense	c.1230	p.Q410H	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141				84	0	0.00	59	4	6.35
MARVELD3	0	genome.wustl.edu	37	16	71674801	71674801	+	Silent	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	16	71674801	71674801	G	A	SNP	MARVELD3	ENST00000299952	human	ensembl	74_37	+1	known	silent	c.1104	p.V368	0.941	NULL	NULL	-	no_errors	MARVELD3	HGNC	ENSG00000140832	tier1	-	-	42	0	0.00	14	4	22.22
MASP1	0	genome.wustl.edu	37	3	186974517	186974517	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	186974517	186974517	G	T	SNP	MASP1	ENST00000296280	human	ensembl	74_37	-1	known	missense	c.679	p.Q227K	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Sushi_SCR_CCP,pfam_EGF-like_Ca-bd_dom,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1	-	no_errors	MASP1	HGNC	ENSG00000127241	tier1	-	-	81	0	0.00	66	4	5.71
MAT2B	0	genome.wustl.edu	37	5	162940973	162940973	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	162940973	162940973	G	A	SNP	MAT2B	ENST00000321757	human	ensembl	74_37	+1	known	missense	c.499	p.E167K	1.000	pfam_dTDP_dehydrorham_reduct,pfam_Epimerase_deHydtase,pfam_3Beta_OHSteriod_DH/Estase	pfam_dTDP_dehydrorham_reduct,pfam_Epimerase_deHydtase,pfam_Polysac_CapD-like,pfam_3Beta_OHSteriod_DH/Estase	-	no_errors	MAT2B	HGNC	ENSG00000038274	tier1	-	-	92	0	0.00	29	9	23.68
MBD5	0	genome.wustl.edu	37	2	149226327	149226327	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	149226327	149226327	C	A	SNP	MBD5	ENST00000407073	human	ensembl	74_37	+1	known	missense	c.815	p.P272H	1.000	NULL	superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd,pfscan_PWWP_dom	-	no_errors	MBD5	HGNC	ENSG00000204406	tier1	-	-	51	0	0.00	25	3	10.71
MCOLN2	0	genome.wustl.edu	37	1	85405236	85405236	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	85405236	85405236	C	A	SNP	MCOLN2	ENST00000370608	human	ensembl	74_37	-1	known	missense	c.1110	p.K370N	1.000	NULL	pfam_PKD1_2_channel	-	no_errors	MCOLN2	HGNC	ENSG00000153898				39	0	0.00	34	2	5.56
MDGA2	0	genome.wustl.edu	37	14	47770688	47770688	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	14	47770688	47770688	C	T	SNP	MDGA2	ENST00000439988	human	ensembl	74_37	-1	known	missense	c.346	p.E116K	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_MAM_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_MAM_dom,pfscan_MAM_dom,pfscan_Ig-like_dom	-	no_errors	MDGA2	Uniprot_gn	ENSG00000272781	tier1	-	-	54	0	0.00	26	11	29.73
MDM2	0	genome.wustl.edu	37	12	69233544	69233544	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	69233544	69233544	G	A	SNP	MDM2	ENST00000462284	human	ensembl	74_37	+1	known	missense	c.1409	p.C470Y	1.000	pirsf_p53_neg-reg_MDM_2/4,pfscan_Znf_RING	pfam_SWIB_MDM2_domain,pfam_Znf_RanBP2,superfamily_SWIB_MDM2_domain,pirsf_p53_neg-reg_MDM_2/4,pfscan_Znf_RanBP2,pfscan_Znf_RING	-	no_errors	MDM2	HGNC	ENSG00000135679	tier1	-	-	128	0	0.00	57	16	21.92
MFAP3	0	genome.wustl.edu	37	5	153432766	153432766	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	153432766	153432766	G	T	SNP	MFAP3	ENST00000322602	human	ensembl	74_37	+1	known	missense	c.582	p.E194D	1.000	NULL	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MFAP3	HGNC	ENSG00000037749	tier1	-	-	49	0	0.00	12	3	20.00
MGP	0	genome.wustl.edu	37	12	15035090	15035090	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	15035090	15035090	G	A	SNP	MGP	ENST00000539261	human	ensembl	74_37	-1	known	missense	c.295	p.R99C	0.977	superfamily_GLA_domain	pfam_GLA_domain,superfamily_GLA_domain,smart_GLA_domain,pfscan_GLA_domain,prints_Osteocalcin/MGP	-	no_errors	MGP	HGNC	ENSG00000111341	tier1	-	-	66	0	0.00	41	9	18.00
MIR1255A	0	genome.wustl.edu	37	4	102251465	102251465	+	RNA	SNP	G	G	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	4	102251465	102251465	G	C	SNP	MIR1255A	ENST00000408338	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR1255A	HGNC	ENSG00000221265	tier1	-	-	137	0	0.00	58	15	20.55
MIR346	0	genome.wustl.edu	37	10	88024517	88024517	+	RNA	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	10	88024517	88024517	C	A	SNP	MIR346	ENST00000362234	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	MIR346	HGNC	ENSG00000199104	tier1	-	-	47	0	0.00	14	4	22.22
MIR507	0	genome.wustl.edu	37	X	146312548	146312548	+	RNA	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	X	146312548	146312548	C	G	SNP	MIR507	ENST00000385234	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR507	HGNC	ENSG00000207969	tier1	-	-	38	0	0.00	17	7	29.17
MIR518F	0	genome.wustl.edu	37	19	54203326	54203326	+	RNA	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	54203326	54203326	C	A	SNP	MIR518F	ENST00000384973	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	MIR518F	HGNC	ENSG00000207706	tier1	-	-	155	0	0.00	84	17	16.83
MIR617	0	genome.wustl.edu	37	12	81226363	81226363	+	RNA	SNP	T	T	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	81226363	81226363	T	C	SNP	MIR617	ENST00000385030	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.166	-	-	-	no_errors	MIR617	HGNC	ENSG00000207763	tier1	-	-	23	0	0.00	11	6	35.29
MPPED2	0	genome.wustl.edu	37	11	30516943	30516943	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	30516943	30516943	G	T	SNP	MPPED2	ENST00000358117	human	ensembl	74_37	-1	known	missense	c.436	p.P146T	1.000	pfam_PEstase_dom	pfam_PEstase_dom	-	no_errors	MPPED2	HGNC	ENSG00000066382				112	0	0.00	55	3	5.17
MRPS34	0	genome.wustl.edu	37	16	1822500	1822500	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	16	1822500	1822500	C	G	SNP	MRPS34	ENST00000397375	human	ensembl	74_37	-1	known	missense	c.379	p.E127Q	0.385	NULL	NULL	-	no_errors	MRPS34	HGNC	ENSG00000074071	tier1	-	-	38	0	0.00	25	9	26.47
MTHFD1L	0	genome.wustl.edu	37	6	151293122	151293122	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	6	151293122	151293122	A	G	SNP	MTHFD1L	ENST00000367321	human	ensembl	74_37	+1	known	missense	c.2053	p.I685V	1.000	pfam_Formate_THF_ligase,superfamily_P-loop_NTPase	pfam_Formate_THF_ligase,pfam_THF_DH/CycHdrlase_NAD-bd_dom,pfam_THF_DH/CycHdrlase_cat_dom,superfamily_P-loop_NTPase,prints_THF_DH/CycHdrlase	-	no_errors	MTHFD1L	HGNC	ENSG00000120254	tier1	-	-	109	0	0.00	30	8	21.05
MYH15	0	genome.wustl.edu	37	3	108189003	108189003	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	108189003	108189003	G	T	SNP	MYH15	ENST00000273353	human	ensembl	74_37	-1	known	missense	c.1500	p.F500L	0.967	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Lambda_DNA-bd_dom,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	-	no_errors	MYH15	HGNC	ENSG00000144821	tier1	-	-	107	0	0.00	46	4	7.84
MYH8	0	genome.wustl.edu	37	17	10301805	10301805	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	10301805	10301805	G	T	SNP	MYH8	ENST00000403437	human	ensembl	74_37	-1	known	nonsense	c.4134	p.Y1378*	0.807	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH8	HGNC	ENSG00000133020				76	0	0.00	36	2	5.26
N4BP2L1	0	genome.wustl.edu	37	13	32978401	32978401	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	13	32978401	32978401	T	A	SNP	N4BP2L1	ENST00000380139	human	ensembl	74_37	-1	novel	missense	c.404	p.Q135L	0.998	NULL	pfam_Zeta_toxin_domain,superfamily_P-loop_NTPase	-	no_errors	N4BP2L1	HGNC	ENSG00000139597	tier1	-	-	101	0	0.00	18	33	64.71
NAV3	0	genome.wustl.edu	37	12	78574660	78574660	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	78574660	78574660	G	C	SNP	NAV3	ENST00000397909	human	ensembl	74_37	+1	known	missense	c.5527	p.E1843Q	1.000	NULL	pfam_CH-domain,pfam_ATPase_AAA_core,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_AAA+_ATPase,pfscan_CH-domain	-	no_errors	NAV3	HGNC	ENSG00000067798	tier1	-	-	54	0	0.00	35	6	14.63
NCOA6	0	genome.wustl.edu	37	20	33329257	33329257	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	20	33329257	33329257	G	T	SNP	NCOA6	ENST00000359003	human	ensembl	74_37	-1	known	silent	c.4803	p.V1601	0.498	NULL	NULL	-	no_errors	NCOA6	HGNC	ENSG00000198646	tier1	-	-	79	0	0.00	60	4	6.25
NDST1	0	genome.wustl.edu	37	5	149929312	149929312	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	149929312	149929312	G	T	SNP	NDST1	ENST00000261797	human	ensembl	74_37	+1	known	missense	c.2389	p.G797W	0.992	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Heparan_SO4_deacetylase,pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	NDST1	HGNC	ENSG00000070614	tier1	-	-	137	0	0.00	73	4	5.19
NEB	0	genome.wustl.edu	37	2	152348691	152348691	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	152348691	152348691	G	T	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.24978	p.D8326E	1.000	smart_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091				92	0	0.00	34	3	8.11
NES	0	genome.wustl.edu	37	1	156642109	156642109	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	156642109	156642109	G	T	SNP	NES	ENST00000368223	human	ensembl	74_37	-1	known	missense	c.1871	p.T624K	0.001	NULL	pfam_IF	-	no_errors	NES	HGNC	ENSG00000132688	tier1	-	-	75	0	0.00	40	4	9.09
NHLRC3	0	genome.wustl.edu	37	13	39621263	39621263	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	13	39621263	39621263	C	A	SNP	NHLRC3	ENST00000379600	human	ensembl	74_37	+1	known	missense	c.765	p.F255L	1.000	NULL	pfam_NHL_repeat,pfscan_NHL_repeat_subgr	-	no_errors	NHLRC3	HGNC	ENSG00000188811				122	0	0.00	36	3	7.69
NLRP14	0	genome.wustl.edu	37	11	7083694	7083694	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	7083694	7083694	G	A	SNP	NLRP14	ENST00000299481	human	ensembl	74_37	+1	known	missense	c.2935	p.D979N	0.973	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP14	HGNC	ENSG00000158077	tier1	-	-	116	0	0.00	51	7	11.86
NOC4L	0	genome.wustl.edu	37	12	132629489	132629489	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	132629489	132629489	C	T	SNP	NOC4L	ENST00000330579	human	ensembl	74_37	+1	known	nonsense	c.208	p.Q70*	0.003	superfamily_ARM-type_fold	pfam_CCAAT-binding_factor,superfamily_ARM-type_fold	-	no_errors	NOC4L	HGNC	ENSG00000184967	tier1	-	-	54	0	0.00	18	4	18.18
NOP56	0	genome.wustl.edu	37	20	2638990	2638990	+	RNA	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	20	2638990	2638990	G	A	SNP	NOP56	ENST00000462630	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NOP56	HGNC	ENSG00000101361	tier1	-	-	76	0	0.00	51	16	23.88
NPY1R	0	genome.wustl.edu	37	4	164247139	164247139	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	4	164247139	164247139	C	A	SNP	NPY1R	ENST00000296533	human	ensembl	74_37	-1	known	missense	c.568	p.D190Y	0.001	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_Glucose_rcpt_Git3_N,pfscan_GPCR_Rhodpsn_7TM,prints_NPY1_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_Glucose_rcpt_Git3_N,pfscan_GPCR_Rhodpsn_7TM,prints_NPY1_rcpt,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	NPY1R	HGNC	ENSG00000164128				84	0	0.00	39	3	7.14
NRCAM	0	genome.wustl.edu	37	7	107872819	107872819	+	Silent	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	107872819	107872819	C	T	SNP	NRCAM	ENST00000379028	human	ensembl	74_37	-1	known	silent	c.378	p.R126	0.981	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NRCAM	HGNC	ENSG00000091129	tier1	-	-	62	0	0.00	29	9	23.68
NTSR1	0	genome.wustl.edu	37	20	61389685	61389685	+	Silent	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	20	61389685	61389685	C	T	SNP	NTSR1	ENST00000370501	human	ensembl	74_37	+1	known	silent	c.984	p.Y328	0.993	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_NT_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_NT1_rcpt,prints_GPCR_Rhodpsn,prints_NT_rcpt	-	no_errors	NTSR1	HGNC	ENSG00000101188				37	0	0.00	25	2	7.41
OR10R2	0	genome.wustl.edu	37	1	158449927	158449927	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	158449927	158449927	C	A	SNP	OR10R2	ENST00000368152	human	ensembl	74_37	+1	known	nonsense	c.260	p.S87*	0.039	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10R2	HGNC	ENSG00000198965				37	0	0.00	25	3	10.71
OR2C3	0	genome.wustl.edu	37	1	247695440	247695440	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	247695440	247695440	G	T	SNP	OR2C3	ENST00000366487	human	ensembl	74_37	-1	known	missense	c.374	p.A125D	0.985	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2C3	HGNC	ENSG00000196242				43	0	0.00	34	2	5.56
OR2T5	0	genome.wustl.edu	37	1	248651977	248651977	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	248651977	248651977	C	G	SNP	OR2T5	ENST00000366473	human	ensembl	74_37	+1	known	missense	c.88	p.L30V	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T5	HGNC	ENSG00000203661				73	0	0.00	53	5	8.62
OR4A16	0	genome.wustl.edu	37	11	55111057	55111057	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	55111057	55111057	G	T	SNP	OR4A16	ENST00000314721	human	ensembl	74_37	+1	known	silent	c.381	p.P127	0.998	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A16	HGNC	ENSG00000181961				71	0	0.00	33	2	5.71
OR52D1	0	genome.wustl.edu	37	11	5510628	5510628	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	5510628	5510628	T	C	SNP	OR52D1	ENST00000322641	human	ensembl	74_37	+1	known	missense	c.692	p.L231P	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52D1	HGNC	ENSG00000181609				63	0	0.00	22	2	8.33
OR5M9	0	genome.wustl.edu	37	11	56230677	56230677	+	Silent	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	56230677	56230677	C	T	SNP	OR5M9	ENST00000279791	human	ensembl	74_37	-1	known	silent	c.201	p.A67	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M9	HGNC	ENSG00000150269	tier1	-	-	41	0	0.00	32	4	11.11
PARP4	0	genome.wustl.edu	37	13	25009294	25009294	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	13	25009294	25009294	G	T	SNP	PARP4	ENST00000381989	human	ensembl	74_37	-1	known	missense	c.3985	p.P1329T	0.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_VIT,pfam_VWF_A,pfam_BRCT_dom,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_BRCT_dom,smart_BRCT_dom,smart_VIT,smart_VWF_A,pfscan_BRCT_dom,pfscan_VWF_A,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP4	HGNC	ENSG00000102699	tier1	-	-	84	0	0.00	26	4	13.33
PBXIP1	0	genome.wustl.edu	37	1	154924318	154924318	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	154924318	154924318	G	T	SNP	PBXIP1	ENST00000490230	human	ensembl	74_37	-1	known	missense	c.131	p.P44H	0.001	NULL	NULL	-	no_errors	PBXIP1	HGNC	ENSG00000163346				41	0	0.00	10	2	16.67
PCDHA3	0	genome.wustl.edu	37	5	140183243	140183243	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	140183243	140183243	C	A	SNP	PCDHA3	ENST00000532566	human	ensembl	74_37	+1	known	missense	c.2461	p.L821M	0.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHA3	HGNC	ENSG00000255408	tier1	-	-	41	0	0.00	27	3	10.00
PCDHA9	0	genome.wustl.edu	37	5	140229864	140229864	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	140229864	140229864	G	A	SNP	PCDHA9	ENST00000532602	human	ensembl	74_37	+1	known	missense	c.1784	p.R595H	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA9	HGNC	ENSG00000204961	tier1	-	-	41	0	0.00	13	11	45.83
PCDHGA9	0	genome.wustl.edu	37	5	140782780	140782780	+	Silent	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	140782780	140782780	G	A	SNP	PCDHGA9	ENST00000573521	human	ensembl	74_37	+1	known	silent	c.261	p.A87	0.954	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA9	HGNC	ENSG00000261934	tier1	-	-	51	0	0.00	25	11	30.56
PCLO	0	genome.wustl.edu	37	7	82579102	82579102	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	82579102	82579102	G	T	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	nonsense	c.10802	p.S3601*	0.998	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	57	0	0.00	28	4	12.50
PDE1C	0	genome.wustl.edu	37	7	32249105	32249105	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	32249105	32249105	G	T	SNP	PDE1C	ENST00000396193	human	ensembl	74_37	-1	novel	missense	c.132	p.F44L	1.000	NULL	pfam_PDEase_catalytic_dom,pfam_PDEase_N,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE1C	HGNC	ENSG00000154678	tier1	-	-	39	0	0.00	19	4	17.39
PDZD2	0	genome.wustl.edu	37	5	32108223	32108223	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	32108223	32108223	G	T	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.8502	p.K2834N	1.000	superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	tier1	-	-	77	0	0.00	51	4	7.27
PEX5L	0	genome.wustl.edu	37	3	179525562	179525562	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	179525562	179525562	C	A	SNP	PEX5L	ENST00000467460	human	ensembl	74_37	-1	known	nonsense	c.1576	p.E526*	1.000	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	PEX5L	HGNC	ENSG00000114757				53	0	0.00	38	2	5.00
PHF20	0	genome.wustl.edu	37	20	34459023	34459023	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	20	34459023	34459023	G	T	SNP	PHF20	ENST00000374012	human	ensembl	74_37	+1	known	missense	c.1069	p.D357Y	0.029	NULL	pfam_DUF3776,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_C2H2	-	no_errors	PHF20	HGNC	ENSG00000025293	tier1	-	-	112	0	0.00	66	4	5.71
PHLDB2	0	genome.wustl.edu	37	3	111603841	111603841	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	111603841	111603841	C	T	SNP	PHLDB2	ENST00000393925	human	ensembl	74_37	+1	known	missense	c.917	p.S306F	0.998	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB2	HGNC	ENSG00000144824				51	0	0.00	26	2	7.14
PKHD1L1	0	genome.wustl.edu	37	8	110439330	110439330	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	8	110439330	110439330	G	T	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	missense	c.2945	p.G982V	0.938	NULL	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038	tier1	-	-	73	0	0.00	67	4	5.63
PKP1	0	genome.wustl.edu	37	1	201297936	201297936	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	201297936	201297936	G	T	SNP	PKP1	ENST00000263946	human	ensembl	74_37	+1	known	missense	c.2216	p.S739I	0.991	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP1	HGNC	ENSG00000081277				134	0	0.00	54	4	6.90
PKP4	0	genome.wustl.edu	37	2	159314668	159314668	+	RNA	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	159314668	159314668	C	T	SNP	PKP4	ENST00000479398	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.287	-	-	-	no_errors	PKP4	HGNC	ENSG00000144283	tier1	-	-	22	0	0.00	5	5	50.00
PLCD4	0	genome.wustl.edu	37	2	219492940	219492940	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	219492940	219492940	G	T	SNP	PLCD4	ENST00000417849	human	ensembl	74_37	+1	known	nonsense	c.961	p.E321*	1.000	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom,prints_Pinositol_PLipase_C	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,smart_Pleckstrin_homology,smart_EF_hand_dom,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pfscan_EF_hand_dom,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C	-	no_errors	PLCD4	HGNC	ENSG00000115556	tier1	-	-	97	0	0.00	70	4	5.41
PLCE1	0	genome.wustl.edu	37	10	96022423	96022423	+	Silent	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	10	96022423	96022423	C	G	SNP	PLCE1	ENST00000260766	human	ensembl	74_37	+1	known	silent	c.3987	p.L1329	1.000	pfam_PLipase_C_EF-hand-like	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_Ras-assoc,pfam_RasGRF_CDC25,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_Ras_GEF_dom,superfamily_C2_dom,smart_RasGRF_CDC25,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,smart_Ras-assoc,pfscan_C2_dom,pfscan_Ras-assoc,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,pfscan_RasGRF_CDC25,prints_Pinositol_PLipase_C	-	no_errors	PLCE1	HGNC	ENSG00000138193	tier1	-	-	67	0	0.00	46	12	20.34
PLEC	0	genome.wustl.edu	37	8	145004664	145004664	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	8	145004664	145004664	G	A	SNP	PLEC	ENST00000322810	human	ensembl	74_37	-1	known	missense	c.2756	p.S919L	0.017	smart_Spectrin/alpha-actinin	pfam_Plectin_repeat,pfam_CH-domain,pfam_S10_plectin_N,superfamily_CH-domain,superfamily_Chorismate_mutase_type_II,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,pfscan_CH-domain	-	no_errors	PLEC	HGNC	ENSG00000178209	tier1	-	-	61	0	0.00	38	8	17.39
PLK3	0	genome.wustl.edu	37	1	45270786	45270787	+	RNA	INS	-	-	AAT			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	45270786	45270787	-	AAT	INS	PLK3	ENST00000461769	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.003	-	-	-	no_errors	PLK3	HGNC	ENSG00000173846	tier1			27	0	0.00	11	2	15.38
POLR3B	0	genome.wustl.edu	37	12	106827518	106827518	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	106827518	106827518	G	T	SNP	POLR3B	ENST00000228347	human	ensembl	74_37	+1	known	missense	c.1649	p.R550L	1.000	pfam_RNA_pol_Rpb2_4	pfam_DNA-dir_RNA_pol_su2_6,pfam_RNA_pol_bsu_protrusion,pfam_RNA_pol_Rpb2_7,pfam_RNA_pol_Rpb2_2,pfam_RNA_pol_Rpb2_3,pfam_RNA_pol_Rpb2_4,pfam_RNA_pol_Rpb2_5	-	no_errors	POLR3B	HGNC	ENSG00000013503				91	0	0.00	46	3	6.12
POPDC2	0	genome.wustl.edu	37	3	119367470	119367470	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	119367470	119367470	G	-	DEL	POPDC2	ENST00000341124	human	ensembl	74_37	-1	known	frame_shift_del	c.646	p.R216fs	1.000	pfam_Popeye_prot,superfamily_cNMP-bd-like	pfam_Popeye_prot,superfamily_cNMP-bd-like	-	no_errors	POPDC2	HGNC	ENSG00000121577	tier1			47	0	0.00	30	2	6.25
POU2F1	0	genome.wustl.edu	37	1	167343528	167343528	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	167343528	167343528	G	C	SNP	POU2F1	ENST00000367866	human	ensembl	74_37	+1	known	missense	c.586	p.A196P	1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU,prints_TF_octamer	-	no_errors	POU2F1	HGNC	ENSG00000143190	tier1	-	-	57	0	0.00	19	6	24.00
POU3F3	0	genome.wustl.edu	37	2	105473134	105473134	+	Nonsense_Mutation	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	105473134	105473134	C	G	SNP	POU3F3	ENST00000361360	human	ensembl	74_37	+1	known	nonsense	c.1166	p.S389*	1.000	superfamily_Lambda_DNA-bd_dom,pirsf_Transcription_factor_POU	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pirsf_Transcription_factor_POU,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F3	HGNC	ENSG00000198914	tier1	-	-	86	0	0.00	26	12	31.58
PPP1R3A	0	genome.wustl.edu	37	7	113518436	113518436	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	113518436	113518436	G	T	SNP	PPP1R3A	ENST00000284601	human	ensembl	74_37	-1	known	nonsense	c.2711	p.S904*	0.961	NULL	pfam_CBM_21,pfscan_CBM_21	-	no_errors	PPP1R3A	HGNC	ENSG00000154415				34	0	0.00	17	2	10.53
PPP2R5B	0	genome.wustl.edu	37	11	64697849	64697849	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	64697849	64697849	G	A	SNP	PPP2R5B	ENST00000164133	human	ensembl	74_37	+1	known	missense	c.778	p.G260R	1.000	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5B	HGNC	ENSG00000068971	tier1	-	-	55	0	0.00	11	9	45.00
PRDM16	0	genome.wustl.edu	37	1	3348663	3348663	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	3348663	3348663	G	C	SNP	PRDM16	ENST00000270722	human	ensembl	74_37	+1	known	missense	c.3655	p.E1219Q	1.000	NULL	pfam_Znf_C2H2,pfam_Znf_BED_prd,smart_SET_dom,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM16	HGNC	ENSG00000142611	tier1	-	-	33	0	0.00	16	6	27.27
PRKAA1	0	genome.wustl.edu	37	5	40767573	40767573	+	Silent	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	40767573	40767573	A	G	SNP	PRKAA1	ENST00000354209	human	ensembl	74_37	-1	known	silent	c.861	p.D287	0.996	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	PRKAA1	HGNC	ENSG00000132356	tier1	-	-	55	0	0.00	38	18	32.14
PRLR	0	genome.wustl.edu	37	5	35049407	35049407	+	Silent	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	35049407	35049407	C	T	SNP	PRLR	ENST00000231423	human	ensembl	74_37	-1	known	silent	c.1116	p.L372	0.000	NULL	pfam_Growth/epo_recpt_lig-bind,pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	PRLR	HGNC	ENSG00000113494	tier1	-	-	83	0	0.00	56	8	12.50
PRR12	0	genome.wustl.edu	37	19	50117865	50117865	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	50117865	50117865	G	T	SNP	PRR12	ENST00000418929	human	ensembl	74_37	+1	novel	nonsense	c.4849	p.E1617*	0.998	NULL	NULL	-	no_errors	PRR12	HGNC	ENSG00000126464	tier1	-	-	100	0	0.00	45	4	8.16
PSD4	0	genome.wustl.edu	37	2	113940984	113940984	+	Silent	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	113940984	113940984	C	T	SNP	PSD4	ENST00000245796	human	ensembl	74_37	+1	known	silent	c.951	p.T317	0.001	NULL	pfam_Sec7_dom,pfam_Pleckstrin_homology,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Sec7_dom,prints_PH_dom-spectrin-type	-	no_errors	PSD4	HGNC	ENSG00000125637	tier1	-	-	68	0	0.00	25	13	33.33
PSMD2	0	genome.wustl.edu	37	3	184019770	184019770	+	Silent	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	184019770	184019770	C	T	SNP	PSMD2	ENST00000310118	human	ensembl	74_37	+1	known	silent	c.615	p.C205	0.996	superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn1	pfam_Proteasome/cyclosome_rpt,superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn1	-	no_errors	PSMD2	HGNC	ENSG00000175166				62	0	0.00	59	4	6.35
PTPN2	0	genome.wustl.edu	37	18	12825906	12825906	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	18	12825906	12825906	T	A	SNP	PTPN2	ENST00000309660	human	ensembl	74_37	-1	known	missense	c.398	p.E133V	0.976	pirsf_Ptpn1/Ptpn2,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pirsf_Ptpn1/Ptpn2,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN2	HGNC	ENSG00000175354	tier1	-	-	65	0	0.00	30	5	14.29
PTPN4	0	genome.wustl.edu	37	2	120723146	120723146	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	120723146	120723146	G	T	SNP	PTPN4	ENST00000263708	human	ensembl	74_37	+1	known	missense	c.2483	p.S828I	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-3/4,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,pfam_PDZ,pfam_FERM-adjacent,superfamily_FERM_central,superfamily_PDZ,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-3/4,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	PTPN4	HGNC	ENSG00000088179				158	0	0.00	73	4	5.19
PUF60	0	genome.wustl.edu	37	8	144898893	144898893	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	8	144898893	144898893	C	T	SNP	PUF60	ENST00000526683	human	ensembl	74_37	-1	known	missense	c.1477	p.V493M	1.000	smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PolyU-bd	-	no_errors	PUF60	HGNC	ENSG00000179950				59	0	0.00	35	2	5.41
PVRL3	0	genome.wustl.edu	37	3	110831057	110831057	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	110831057	110831057	A	G	SNP	PVRL3	ENST00000485303	human	ensembl	74_37	+1	known	missense	c.341	p.Q114R	1.000	pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	PVRL3	HGNC	ENSG00000177707	tier1	-	-	89	0	0.00	27	10	27.03
PVRL3	0	genome.wustl.edu	37	3	110852913	110852913	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	110852913	110852913	C	A	SNP	PVRL3	ENST00000485303	human	ensembl	74_37	+1	known	missense	c.1501	p.L501I	1.000	NULL	pfam_CD80_C2-set,pfam_Ig_V-set,pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	PVRL3	HGNC	ENSG00000177707	tier1	-	-	49	0	0.00	18	3	14.29
PYGB	0	genome.wustl.edu	37	20	25262690	25262690	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	20	25262690	25262690	G	T	SNP	PYGB	ENST00000216962	human	ensembl	74_37	+1	known	silent	c.1425	p.L475	0.978	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGB	HGNC	ENSG00000100994	tier1	-	-	112	0	0.00	66	4	5.71
R3HDM2	0	genome.wustl.edu	37	12	57652736	57652736	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	57652736	57652736	G	T	SNP	R3HDM2	ENST00000347140	human	ensembl	74_37	-1	known	nonsense	c.2196	p.Y732*	0.972	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	R3HDM2	HGNC	ENSG00000179912	tier1	-	-	73	0	0.00	51	4	7.27
RAD17	0	genome.wustl.edu	37	5	68689059	68689059	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	68689059	68689059	G	T	SNP	RAD17	ENST00000380774	human	ensembl	74_37	+1	known	nonsense	c.1300	p.E434*	0.674	tigrfam_Checkpoint_prot_Rad24_fun/met	superfamily_P-loop_NTPase,tigrfam_Checkpoint_prot_Rad24_fun/met	-	no_errors	RAD17	HGNC	ENSG00000152942	tier1	-	-	77	0	0.00	35	4	10.26
RAG1	0	genome.wustl.edu	37	11	36596307	36596307	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	36596307	36596307	C	A	SNP	RAG1	ENST00000299440	human	ensembl	74_37	+1	known	missense	c.1453	p.H485N	1.000	NULL	pfam_Znf_VDJ_recomb-activ_1,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RAG1	HGNC	ENSG00000166349	tier1	-	-	36	0	0.00	25	4	13.79
RAP1GAP2	0	genome.wustl.edu	37	17	2923853	2923853	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	2923853	2923853	C	T	SNP	RAP1GAP2	ENST00000254695	human	ensembl	74_37	+1	known	missense	c.1715	p.T572M	1.000	NULL	pfam_Rap_GAP_dom,pfscan_Rap_GAP_dom	-	no_errors	RAP1GAP2	HGNC	ENSG00000132359	tier1	-	-	94	0	0.00	41	4	8.89
RASSF2	0	genome.wustl.edu	37	20	4764195	4764195	+	RNA	SNP	T	T	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	20	4764195	4764195	T	A	SNP	RASSF2	ENST00000478553	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RASSF2	HGNC	ENSG00000101265	tier1	-	-	43	0	0.00	18	7	28.00
RBM15	0	genome.wustl.edu	37	1	110883406	110883406	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	110883406	110883406	G	C	SNP	RBM15	ENST00000369784	human	ensembl	74_37	+1	known	missense	c.1379	p.G460A	1.000	smart_RRM_dom,pfscan_RRM_dom	pfam_SPOC_C,pfam_RRM_dom,superfamily_SPOC_like_C_dom,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	RBM15	HGNC	ENSG00000162775				45	0	0.00	19	3	13.64
RBM26	0	genome.wustl.edu	37	13	79915342	79915342	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	13	79915342	79915342	G	T	SNP	RBM26	ENST00000438724	human	ensembl	74_37	-1	known	missense	c.2376	p.D792E	1.000	NULL	pfam_PWI_dom,superfamily_PWI_dom,smart_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM26	HGNC	ENSG00000139746				54	0	0.00	17	2	10.53
RIMS2	0	genome.wustl.edu	37	8	104780629	104780629	+	RNA	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	8	104780629	104780629	C	G	SNP	RIMS2	ENST00000395361	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RIMS2	HGNC	ENSG00000176406	tier1	-	-	40	0	0.00	20	5	20.00
RNF175	0	genome.wustl.edu	37	4	154631573	154631573	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	4	154631573	154631573	G	T	SNP	RNF175	ENST00000347063	human	ensembl	74_37	-1	known	missense	c.935	p.P312H	1.000	NULL	smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF175	HGNC	ENSG00000145428	tier1	-	-	95	0	0.00	42	4	8.70
RPL7A	0	genome.wustl.edu	37	9	136217061	136217061	+	RNA	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	9	136217061	136217061	C	A	SNP	RPL7A	ENST00000485706	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RPL7A	HGNC	ENSG00000148303	tier1	-	-	61	0	0.00	43	4	8.51
RYR2	0	genome.wustl.edu	37	1	237787161	237787161	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	237787161	237787161	A	G	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.6007	p.T2003A	0.771	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				106	0	0.00	73	4	5.19
SAMD9L	0	genome.wustl.edu	37	7	92761639	92761639	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	92761639	92761639	A	G	SNP	SAMD9L	ENST00000318238	human	ensembl	74_37	-1	known	missense	c.3646	p.F1216L	0.381	NULL	superfamily_SAM/pointed,superfamily_P-loop_NTPase,pfscan_SAM	-	no_errors	SAMD9L	HGNC	ENSG00000177409	tier1	-	-	92	0	0.00	51	5	8.93
SCAF4	0	genome.wustl.edu	37	21	33043731	33043731	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	21	33043731	33043731	G	T	SNP	SCAF4	ENST00000286835	human	ensembl	74_37	-1	known	missense	c.3425	p.A1142E	0.958	NULL	pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_CID_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SCAF4	HGNC	ENSG00000156304	tier1	-	-	74	0	0.00	19	3	13.64
SCN10A	0	genome.wustl.edu	37	3	38805007	38805007	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	38805007	38805007	G	T	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	missense	c.680	p.S227Y	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313				82	0	0.00	33	2	5.71
SCN2A	0	genome.wustl.edu	37	2	166231377	166231377	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	166231377	166231377	G	C	SNP	SCN2A	ENST00000283256	human	ensembl	74_37	+1	known	missense	c.4155	p.E1385D	0.998	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_DUF3451,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SCN2A	HGNC	ENSG00000136531	tier1	-	-	55	0	0.00	25	6	19.35
SEC16A	0	genome.wustl.edu	37	9	139369032	139369032	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	9	139369032	139369032	G	T	SNP	SEC16A	ENST00000313050	human	ensembl	74_37	-1	known	silent	c.3036	p.S1012	0.001	NULL	NULL	-	no_errors	SEC16A	HGNC	ENSG00000148396	tier1	-	-	95	0	0.00	42	4	8.70
SEMA6D	0	genome.wustl.edu	37	15	48059241	48059241	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	15	48059241	48059241	G	T	SNP	SEMA6D	ENST00000316364	human	ensembl	74_37	+1	known	missense	c.1716	p.L572F	1.000	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA6D	HGNC	ENSG00000137872	tier1	-	-	97	0	0.00	58	4	6.45
SEPT14	0	genome.wustl.edu	37	7	55902220	55902220	+	Silent	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	55902220	55902220	C	A	SNP	SEPT14	ENST00000388975	human	ensembl	74_37	-1	known	silent	c.618	p.T206	0.993	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	pfam_Cell_div_GTP-bd,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT14	HGNC	ENSG00000154997				87	0	0.00	47	3	6.00
SERPINA7	0	genome.wustl.edu	37	X	105277737	105277737	+	RNA	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	X	105277737	105277737	G	A	SNP	SERPINA7	ENST00000487487	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SERPINA7	HGNC	ENSG00000123561	tier1	-	-	32	0	0.00	27	10	27.03
SERPINB12	0	genome.wustl.edu	37	18	61231232	61231232	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	18	61231232	61231232	G	T	SNP	SERPINB12	ENST00000269491	human	ensembl	74_37	+1	known	missense	c.524	p.S175I	0.019	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINB12	HGNC	ENSG00000166634	tier1	-	-	102	0	0.00	61	4	6.15
SERPINF1	0	genome.wustl.edu	37	17	1674466	1674466	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	1674466	1674466	G	C	SNP	SERPINF1	ENST00000254722	human	ensembl	74_37	+1	known	missense	c.427	p.V143L	0.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINF1	HGNC	ENSG00000132386				67	0	0.00	33	3	8.33
SET	0	genome.wustl.edu	37	9	131446208	131446208	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	9	131446208	131446208	C	G	SNP	SET	ENST00000372692	human	ensembl	74_37	+1	known	missense	c.34	p.Q12E	0.024	NULL	pfam_NAP_family	-	no_errors	SET	HGNC	ENSG00000119335	tier1	-	-	84	0	0.00	31	11	26.19
SFTPA1	0	genome.wustl.edu	37	10	81372184	81372184	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	10	81372184	81372184	C	A	SNP	SFTPA1	ENST00000419470	human	ensembl	74_37	+1	known	missense	c.334	p.P112T	0.986	NULL	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	SFTPA1	HGNC	ENSG00000122852	tier1	-	-	77	0	0.00	27	8	22.86
SHPRH	0	genome.wustl.edu	37	6	146266723	146266723	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	6	146266723	146266723	C	A	SNP	SHPRH	ENST00000367503	human	ensembl	74_37	-1	known	nonsense	c.1372	p.G458*	1.000	pfam_Histone_H1/H5_H15,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Histone_H1/H5_H15	pfam_SNF2_N,pfam_Histone_H1/H5_H15,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,superfamily_WW_dom,smart_Helicase_ATP-bd,smart_Histone_H1/H5_H15,smart_Znf_PHD,smart_Znf_RING,smart_Helicase_C,pfscan_Znf_RING,pfscan_Helicase_C	-	no_errors	SHPRH	HGNC	ENSG00000146414				65	0	0.00	37	2	5.13
SIMC1	0	genome.wustl.edu	37	5	175763794	175763794	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	175763794	175763794	G	T	SNP	SIMC1	ENST00000443967	human	ensembl	74_37	+1	known	missense	c.2186	p.S729I	1.000	NULL	NULL	-	no_errors	SIMC1	HGNC	ENSG00000170085	tier1	-	-	52	0	0.00	22	4	15.38
SIRPG	0	genome.wustl.edu	37	20	1615975	1615975	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	20	1615975	1615975	C	T	SNP	SIRPG	ENST00000303415	human	ensembl	74_37	-1	known	missense	c.1019	p.S340N	0.005	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_C1-set,pfam_CD80_C2-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	SIRPG	HGNC	ENSG00000089012				100	0	0.00	76	4	5.00
SLC12A2	0	genome.wustl.edu	37	5	127450359	127450359	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	127450359	127450359	G	T	SNP	SLC12A2	ENST00000262461	human	ensembl	74_37	+1	known	missense	c.1034	p.G345V	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,pfam_AA_permease_N,prints_Na/K/Cl_cotranspt1,prints_Na/K/Cl_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A2	HGNC	ENSG00000064651				84	0	0.00	36	4	10.00
SLC12A8	0	genome.wustl.edu	37	3	124826791	124826791	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	124826791	124826791	G	T	SNP	SLC12A8	ENST00000423114	human	ensembl	74_37	-1	known	silent	c.1326	p.T442	0.007	NULL	pfam_AA-permease/SLC12A_dom,superfamily_ABC1_TM_dom	-	no_errors	SLC12A8	HGNC	ENSG00000221955	tier1	-	-	75	0	0.00	28	6	17.65
SLC22A24	0	genome.wustl.edu	37	11	62910850	62910850	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	62910850	62910850	C	G	SNP	SLC22A24	ENST00000326192	human	ensembl	74_37	-1	known	missense	c.402	p.E134D	1.000	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A24	HGNC	ENSG00000197658	tier1	-	-	89	0	0.00	51	9	15.00
SLC2A13	0	genome.wustl.edu	37	12	40345077	40345077	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	40345077	40345077	G	A	SNP	SLC2A13	ENST00000280871	human	ensembl	74_37	-1	known	missense	c.1016	p.S339L	1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,superfamily_Plexin-like_fold,prints_Sugar/inositol_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A13	HGNC	ENSG00000151229	tier1	-	-	175	0	0.00	83	5	5.68
SLC35A1	0	genome.wustl.edu	37	6	88221148	88221148	+	Silent	SNP	A	A	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	6	88221148	88221148	A	T	SNP	SLC35A1	ENST00000369552	human	ensembl	74_37	+1	known	silent	c.918	p.V306	0.994	pfam_Nuc_sug_transpt,pfam_UAA,pirsf_UDP/CMP-sugar_transptr,tigrfam_UDPgal_transpt	pfam_Nuc_sug_transpt,pfam_UAA,pirsf_UDP/CMP-sugar_transptr,tigrfam_UDPgal_transpt	-	no_errors	SLC35A1	HGNC	ENSG00000164414	tier1	-	-	99	0	0.00	64	4	5.88
SLC41A3	0	genome.wustl.edu	37	3	125775273	125775273	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	125775273	125775273	G	T	SNP	SLC41A3	ENST00000383598	human	ensembl	74_37	-1	known	nonsense	c.123	p.C41*	0.888	NULL	pfam_SLC41_membr_dom	-	no_errors	SLC41A3	HGNC	ENSG00000114544	tier1	-	-	63	0	0.00	29	4	12.12
SLC8A3	0	genome.wustl.edu	37	14	70512793	70512793	+	Silent	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	14	70512793	70512793	C	A	SNP	SLC8A3	ENST00000381269	human	ensembl	74_37	-1	known	silent	c.2655	p.P885	0.981	pfam_NaCa_Exmemb,tigrfam_Na_Ca_Ex	pfam_NaCa_Exmemb,pfam_Calx_beta,smart_Calx_beta,prints_Na_Ca_Ex,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A3	HGNC	ENSG00000100678				59	0	0.00	24	2	7.69
SLC9A1	0	genome.wustl.edu	37	1	27425903	27425904	+	RNA	INS	-	-	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	27425903	27425904	-	G	INS	SLC9A1	ENST00000490329	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	SLC9A1	HGNC	ENSG00000090020	tier1			107	0	0.00	43	8	15.69
SMARCA4	0	genome.wustl.edu	37	19	11100016	11100016	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	11100016	11100016	G	T	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.1142	p.R381L	1.000	NULL	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616				94	0	0.00	28	2	6.67
SNHG14	0	genome.wustl.edu	37	15	25328597	25328597	+	RNA	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	15	25328597	25328597	C	T	SNP	SNHG14	ENST00000383025	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	SNHG14	HGNC	ENSG00000224078	tier1	-	-	114	0	0.00	74	5	6.33
SNORA72	0	genome.wustl.edu	37	8	99054503	99054504	+	RNA	INS	-	-	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	8	99054503	99054504	-	T	INS	SNORA72	ENST00000501016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	KB-1208A12.3	Clone_based_vega_gene	ENSG00000245970	tier1			36	0	0.00	29	4	12.12
SNORD3B-1	0	genome.wustl.edu	37	17	18965497	18965497	+	RNA	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	18965497	18965497	C	A	SNP	SNORD3B-1	ENST00000577988	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNORD3B-1	HGNC	ENSG00000265185	tier1	-	-	51	0	0.00	24	10	29.41
SPECC1L	0	genome.wustl.edu	37	22	24718602	24718602	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	22	24718602	24718602	C	A	SNP	SPECC1L	ENST00000314328	human	ensembl	74_37	+1	known	missense	c.1654	p.Q552K	1.000	NULL	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_bHLH_dom,smart_CH-domain,pfscan_CH-domain	-	no_errors	SPECC1L	HGNC	ENSG00000100014				76	0	0.00	54	3	5.26
SPEN	0	genome.wustl.edu	37	1	16254623	16254623	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	16254623	16254623	C	A	SNP	SPEN	ENST00000375759	human	ensembl	74_37	+1	known	missense	c.1888	p.R630S	1.000	NULL	pfam_RRM_dom,pfam_SPOC_C,superfamily_SPOC_like_C_dom,smart_RRM_dom,pfscan_SPOC_met,pfscan_RRM_dom	-	no_errors	SPEN	HGNC	ENSG00000065526				54	0	0.00	25	3	10.71
SSPO	0	genome.wustl.edu	37	7	149474349	149474349	+	RNA	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	149474349	149474349	C	A	SNP	SSPO	ENST00000262089	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.462	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558				62	0	0.00	38	4	9.52
SSUH2	0	genome.wustl.edu	37	3	8677490	8677490	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	8677490	8677490	G	T	SNP	SSUH2	ENST00000544814	human	ensembl	74_37	-1	known	missense	c.82	p.L28I	0.973	NULL	superfamily_HSP_DnaJ_Cys-rich_dom	-	no_errors	SSUH2	HGNC	ENSG00000125046	tier1	-	-	99	0	0.00	54	4	6.90
SUOX	0	genome.wustl.edu	37	12	56398569	56398569	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	56398569	56398569	G	T	SNP	SUOX	ENST00000266971	human	ensembl	74_37	+1	known	missense	c.1396	p.G466W	1.000	pfam_MoCF_OxRdtse_dimer,superfamily_Ig_E-set,prints_Mopterin_OxRdtase_euk	pfam_OxRdtase_Mopterin-bd_dom,pfam_MoCF_OxRdtse_dimer,pfam_Cyt_B5-like_heme/steroid-bd,superfamily_OxRdtase_Mopterin-bd_dom,superfamily_Ig_E-set,superfamily_Cyt_B5-like_heme/steroid-bd,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Mopterin_OxRdtase_euk,prints_Cyt_B5-like_heme/steroid-bd	-	no_errors	SUOX	HGNC	ENSG00000139531	tier1	-	-	121	0	0.00	61	4	6.15
SUSD4	0	genome.wustl.edu	37	1	223465838	223465838	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	223465838	223465838	G	T	SNP	SUSD4	ENST00000343846	human	ensembl	74_37	-1	known	missense	c.304	p.H102N	0.006	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	SUSD4	HGNC	ENSG00000143502	tier1	-	-	90	0	0.00	73	4	5.19
SYCE1L	0	genome.wustl.edu	37	16	77240393	77240393	+	Silent	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	16	77240393	77240393	G	A	SNP	SYCE1L	ENST00000378644	human	ensembl	74_37	+1	known	silent	c.117	p.Q39	1.000	NULL	NULL	-	no_errors	SYCE1L	HGNC	ENSG00000205078	tier1	-	-	84	0	0.00	30	9	23.08
SYCE2	0	genome.wustl.edu	37	19	13015389	13015389	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	13015389	13015389	G	T	SNP	SYCE2	ENST00000293695	human	ensembl	74_37	-1	known	missense	c.223	p.Q75K	1.000	NULL	NULL	-	no_errors	SYCE2	HGNC	ENSG00000161860	tier1	-	-	60	0	0.00	16	3	15.79
SYT8	0	genome.wustl.edu	37	11	1857174	1857174	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	1857174	1857174	G	T	SNP	SYT8	ENST00000381968	human	ensembl	74_37	+1	known	missense	c.359	p.C120F	0.015	superfamily_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin	-	no_errors	SYT8	HGNC	ENSG00000149043				62	0	0.00	24	2	7.69
TANK	0	genome.wustl.edu	37	2	162091891	162091891	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	162091891	162091891	G	T	SNP	TANK	ENST00000405852	human	ensembl	74_37	+1	novel	missense	c.1217	p.R406L	0.998	NULL	NULL	-	no_errors	TANK	HGNC	ENSG00000136560	tier1	-	-	92	0	0.00	52	4	7.14
TBC1D31	0	genome.wustl.edu	37	8	124094947	124094947	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	8	124094947	124094947	A	G	SNP	TBC1D31	ENST00000287380	human	ensembl	74_37	+1	known	missense	c.230	p.N77S	0.980	superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_Rab-GTPase-TBC_dom,pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Rab-GTPase-TBC_dom,smart_WD40_repeat,pfscan_Rab-GTPase-TBC_dom,pfscan_WD40_repeat_dom	-	no_errors	TBC1D31	HGNC	ENSG00000156787	tier1	-	-	59	0	0.00	50	14	21.88
TCF20	0	genome.wustl.edu	37	22	42608243	42608243	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	22	42608243	42608243	G	T	SNP	TCF20	ENST00000359486	human	ensembl	74_37	-1	known	missense	c.3069	p.S1023R	1.000	NULL	smart_Znf_PHD	-	no_errors	TCF20	HGNC	ENSG00000100207				63	0	0.00	43	4	8.51
TECPR1	0	genome.wustl.edu	37	7	97867827	97867827	+	Silent	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	97867827	97867827	G	A	SNP	TECPR1	ENST00000379795	human	ensembl	74_37	-1	known	silent	c.1029	p.N343	0.371	smart_Beta-propeller_rpt_TECPR	pfam_Beta-propeller_rpt_TECPR,superfamily_RCC1/BLIP-II,smart_Beta-propeller_rpt_TECPR,smart_Peroxin/Ferlin	-	no_errors	TECPR1	HGNC	ENSG00000205356	tier1	-	-	69	0	0.00	33	4	10.81
TENM4	0	genome.wustl.edu	37	11	78387402	78387402	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	78387402	78387402	G	T	SNP	TENM4	ENST00000278550	human	ensembl	74_37	-1	known	missense	c.5291	p.A1764D	0.979	NULL	pfam_Ten_N,pfam_EGF_extracell,pfam_YD,superfamily_CarboxyPept-like_regulatory,smart_EG-like_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM4	HGNC	ENSG00000149256				79	0	0.00	76	4	5.00
TEX15	0	genome.wustl.edu	37	8	30700967	30700967	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	8	30700967	30700967	C	A	SNP	TEX15	ENST00000256246	human	ensembl	74_37	-1	known	missense	c.5567	p.W1856L	1.000	NULL	NULL	-	no_errors	TEX15	HGNC	ENSG00000133863				34	0	0.00	27	3	10.00
TEX2	0	genome.wustl.edu	37	17	62228304	62228304	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	62228304	62228304	G	T	SNP	TEX2	ENST00000258991	human	ensembl	74_37	-1	known	missense	c.3179	p.P1060Q	1.000	NULL	pfam_DUF2404	-	no_errors	TEX2	HGNC	ENSG00000136478	tier1	-	-	78	0	0.00	44	5	10.20
TFCP2	0	genome.wustl.edu	37	12	51566125	51566125	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	51566125	51566125	G	T	SNP	TFCP2	ENST00000257915	human	ensembl	74_37	-1	known	silent	c.81	p.S27	0.877	NULL	pfam_CP2,superfamily_SAM/pointed	-	no_errors	TFCP2	HGNC	ENSG00000135457	tier1	-	-	64	0	0.00	31	4	11.43
THBS4	0	genome.wustl.edu	37	5	79354543	79354543	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	5	79354543	79354543	G	A	SNP	THBS4	ENST00000350881	human	ensembl	74_37	+1	known	missense	c.662	p.R221Q	1.000	pfam_Thbs/COMP_coiled-coil	pfam_Thrombospondin_C,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	THBS4	HGNC	ENSG00000113296	tier1	-	-	81	0	0.00	21	13	38.24
TJP1	0	genome.wustl.edu	37	15	30058538	30058538	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	15	30058538	30058538	G	A	SNP	TJP1	ENST00000346128	human	ensembl	74_37	-1	known	missense	c.520	p.R174W	1.000	superfamily_PDZ	pfam_PDZ,pfam_ZU5,pfam_GK/Ca_channel_bsu,pfam_SH3_2,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_PDZ,smart_GK/Ca_channel_bsu,smart_ZU5,pfscan_PDZ,pfscan_SH3_domain,pfscan_ZU5,pfscan_Guanylate_kin-like,prints_ZonOcculS1,prints_ZonOcculdens	-	no_errors	TJP1	HGNC	ENSG00000104067	tier1	-	-	59	0	0.00	25	32	56.14
TM4SF19	0	genome.wustl.edu	37	3	196050665	196050665	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	196050665	196050665	C	A	SNP	TM4SF19	ENST00000446879	human	ensembl	74_37	-1	putative	missense	c.649	p.A217S	0.000	NULL	pfam_L6_membrane	-	no_errors	TM4SF19	HGNC	ENSG00000145107	tier1	-	-	62	0	0.00	36	20	35.71
TMEM168	0	genome.wustl.edu	37	7	112424456	112424456	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	112424456	112424456	C	A	SNP	TMEM168	ENST00000312814	human	ensembl	74_37	-1	known	missense	c.425	p.R142I	1.000	NULL	superfamily_ConA-like_lec_gl_sf	-	no_errors	TMEM168	HGNC	ENSG00000146802				75	0	0.00	31	2	6.06
TMEM200C	0	genome.wustl.edu	37	18	5890378	5890378	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	18	5890378	5890378	G	A	SNP	TMEM200C	ENST00000383490	human	ensembl	74_37	-1	known	missense	c.1685	p.A562V	0.001	NULL	pfam_DUF2371_TMEM200	-	no_errors	TMEM200C	HGNC	ENSG00000206432	tier1	-	-	57	0	0.00	22	4	15.38
TMEM235	0	genome.wustl.edu	37	17	76227867	76227868	+	Frame_Shift_Ins	INS	-	-	CTTC			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	76227867	76227868	-	CTTC	INS	TMEM235	ENST00000421688	human	ensembl	74_37	+1	known	frame_shift_ins	c.313_314	p.S107fs	0.001:0.001	NULL	NULL	-	no_errors	TMEM235	HGNC	ENSG00000204278	tier1			98	0	0.00	31	12	27.91
TMEM39A	0	genome.wustl.edu	37	3	119156840	119156840	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	119156840	119156840	G	A	SNP	TMEM39A	ENST00000319172	human	ensembl	74_37	-1	known	missense	c.686	p.S229L	0.956	pfam_Uncharacterised_TMEM39	pfam_Uncharacterised_TMEM39	-	no_errors	TMEM39A	HGNC	ENSG00000176142				29	0	0.00	24	3	11.11
TNFAIP6	0	genome.wustl.edu	37	2	152226702	152226702	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	152226702	152226702	G	A	SNP	TNFAIP6	ENST00000243347	human	ensembl	74_37	+1	known	missense	c.563	p.C188Y	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Link,superfamily_CUB_dom,superfamily_C-type_lectin_fold,smart_Link,smart_CUB_dom,pfscan_CUB_dom,pfscan_Link,prints_Link	-	no_errors	TNFAIP6	HGNC	ENSG00000123610	tier1	-	-	74	0	0.00	37	19	33.93
TNRC18	0	genome.wustl.edu	37	7	5430248	5430248	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	5430248	5430248	G	T	SNP	TNRC18	ENST00000399537	human	ensembl	74_37	-1	known	missense	c.355	p.L119M	1.000	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	TNRC18	HGNC	ENSG00000182095				152	0	0.00	73	4	5.19
TP53	0	genome.wustl.edu	37	17	7577124	7577124	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	7577124	7577124	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.814	p.V272M	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	41	0	0.00	20	10	33.33
TP53	0	genome.wustl.edu	37	17	7578410	7578410	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	7578410	7578410	T	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.520	p.R174W	0.986	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	58	0	0.00	15	9	37.50
TP63	0	genome.wustl.edu	37	3	189585728	189585728	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	189585728	189585728	G	A	SNP	TP63	ENST00000264731	human	ensembl	74_37	+1	known	missense	c.989	p.R330K	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_SAM_2,superfamily_p53-like_TF_DNA-bd,superfamily_SAM/pointed,superfamily_p53_tetrameristn,smart_SAM,prints_p53_tumour_suppressor	-	no_errors	TP63	HGNC	ENSG00000073282	tier1	-	-	96	0	0.00	56	11	16.18
TPTE	0	genome.wustl.edu	37	21	10998232	10998232	+	RNA	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	21	10998232	10998232	C	G	SNP	TPTE	ENST00000415664	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TPTE	HGNC	ENSG00000166157	tier1	-	-	215	0	0.00	121	11	8.33
TRAF5	0	genome.wustl.edu	37	1	211526731	211526731	+	Silent	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	211526731	211526731	G	A	SNP	TRAF5	ENST00000261464	human	ensembl	74_37	+1	known	silent	c.150	p.S50	0.001	smart_Znf_RING,pirsf_TNF_rcpt--assoc_TRAF,pfscan_Znf_RING	pfam_MATH,superfamily_TRAF-like,smart_Znf_RING,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	TRAF5	HGNC	ENSG00000082512				22	0	0.00	23	2	8.00
TRAPPC11	0	genome.wustl.edu	37	4	184601286	184601286	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	4	184601286	184601286	G	T	SNP	TRAPPC11	ENST00000334690	human	ensembl	74_37	+1	known	nonsense	c.979	p.G327*	1.000	pfam_Foie-gras_1	pfam_Foie-gras_1,pfam_DUF1683_C	-	no_errors	TRAPPC11	HGNC	ENSG00000168538	tier1	-	-	53	0	0.00	29	3	9.38
TRHDE	0	genome.wustl.edu	37	12	72771779	72771779	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	72771779	72771779	G	T	SNP	TRHDE	ENST00000261180	human	ensembl	74_37	+1	known	missense	c.1058	p.R353L	1.000	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657				107	0	0.00	46	3	6.12
TSHZ2	0	genome.wustl.edu	37	20	51871834	51871834	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	20	51871834	51871834	G	T	SNP	TSHZ2	ENST00000371497	human	ensembl	74_37	+1	known	nonsense	c.1837	p.E613*	1.000	NULL	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ2	HGNC	ENSG00000182463				56	0	0.00	30	2	6.25
TTC24	0	genome.wustl.edu	37	1	156551436	156551436	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	156551436	156551436	G	T	SNP	TTC24	ENST00000368236	human	ensembl	74_37	+1	known	missense	c.280	p.D94Y	0.999	pfscan_TPR-contain_dom	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC24	HGNC	ENSG00000187862	tier1	-	-	73	0	0.00	28	4	12.50
TTC38	0	genome.wustl.edu	37	22	46671246	46671246	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	22	46671246	46671246	G	T	SNP	TTC38	ENST00000381031	human	ensembl	74_37	+1	novel	missense	c.467	p.G156V	1.000	NULL	NULL	-	no_errors	TTC38	HGNC	ENSG00000075234				79	0	0.00	65	4	5.80
TUBB1	0	genome.wustl.edu	37	20	57598917	57598917	+	Silent	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	20	57598917	57598917	C	T	SNP	TUBB1	ENST00000217133	human	ensembl	74_37	+1	known	silent	c.435	p.S145	0.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Gamma_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB1	HGNC	ENSG00000101162	tier1	-	-	55	0	0.00	41	9	18.00
UBE2O	0	genome.wustl.edu	37	17	74395935	74395935	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	74395935	74395935	C	A	SNP	UBE2O	ENST00000319380	human	ensembl	74_37	-1	known	missense	c.1223	p.R408L	0.185	NULL	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2O	HGNC	ENSG00000175931	tier1	-	-	45	0	0.00	13	5	27.78
UFL1	0	genome.wustl.edu	37	6	97001214	97001214	+	Silent	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	6	97001214	97001214	C	G	SNP	UFL1	ENST00000369278	human	ensembl	74_37	+1	known	silent	c.2220	p.V740	0.107	NULL	pfam_E3_UFM1_ligase_1	-	no_errors	UFL1	HGNC	ENSG00000014123	tier1	-	-	69	0	0.00	32	4	11.11
USP10	0	genome.wustl.edu	37	16	84778244	84778244	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	16	84778244	84778244	G	T	SNP	USP10	ENST00000570191	human	ensembl	74_37	+1	known	nonsense	c.169	p.E57*	1.000	NULL	pfam_Peptidase_C19/C67,pfam_Ataxin-2_C,pfscan_Peptidase_C19/C67	-	no_errors	USP10	HGNC	ENSG00000103194	tier1	-	-	93	0	0.00	47	4	7.84
UTRN	0	genome.wustl.edu	37	6	144780469	144780469	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	6	144780469	144780469	C	A	SNP	UTRN	ENST00000367545	human	ensembl	74_37	+1	known	missense	c.2686	p.R896S	0.000	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	UTRN	HGNC	ENSG00000152818				73	0	0.00	38	2	5.00
VAMP5	0	genome.wustl.edu	37	2	85818866	85818866	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	2	85818866	85818866	C	T	SNP	VAMP5	ENST00000306384	human	ensembl	74_37	+1	known	missense	c.22	p.R8W	0.882	pfam_Synaptobrevin,pirsf_Synaptobrevin_met/fun,pfscan_Synaptobrevin	pfam_Synaptobrevin,pirsf_Synaptobrevin_met/fun,prints_Synaptobrevin,pfscan_Synaptobrevin	-	no_errors	VAMP5	HGNC	ENSG00000168899				73	0	0.00	25	2	7.41
VPS11	0	genome.wustl.edu	37	11	118947656	118947656	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	11	118947656	118947656	G	T	SNP	VPS11	ENST00000300793	human	ensembl	74_37	+1	known	missense	c.1285	p.A429S	1.000	pfam_Clathrin_H-chain/VPS_repeat,superfamily_ARM-type_fold,pirsf_VPS11	pfam_VPS11_C,pfam_Clathrin_H-chain/VPS_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_Znf_RING,pirsf_VPS11,pfscan_Znf_RING	-	no_errors	VPS11	HGNC	ENSG00000160695	tier1	-	-	46	0	0.00	13	3	18.75
VPS26A	0	genome.wustl.edu	37	10	70893327	70893327	+	Silent	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	10	70893327	70893327	A	G	SNP	VPS26A	ENST00000546041	human	ensembl	74_37	+1	known	silent	c.66	p.L22	0.000	NULL	pfam_VPS26	-	no_errors	VPS26A	HGNC	ENSG00000122958	tier1	-	-	81	0	0.00	22	26	54.17
VPS9D1	0	genome.wustl.edu	37	16	89782964	89782964	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	16	89782964	89782964	G	T	SNP	VPS9D1	ENST00000389386	human	ensembl	74_37	-1	known	missense	c.337	p.R113S	0.996	NULL	pfam_VPS9,smart_VPS9_subgr,pfscan_VPS9	-	no_errors	VPS9D1	HGNC	ENSG00000075399	tier1	-	-	97	0	0.00	54	4	6.90
VSX1	0	genome.wustl.edu	37	20	25058370	25058370	+	Silent	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	20	25058370	25058370	G	A	SNP	VSX1	ENST00000376709	human	ensembl	74_37	-1	known	silent	c.759	p.L253	0.995	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	VSX1	HGNC	ENSG00000100987	tier1	-	-	33	0	0.00	21	7	25.00
WBSCR16	0	genome.wustl.edu	37	7	74486515	74486515	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	74486515	74486515	G	T	SNP	WBSCR16	ENST00000329959	human	ensembl	74_37	-1	known	silent	c.393	p.V131	0.861	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	WBSCR16	HGNC	ENSG00000174374	tier1	-	-	96	0	0.00	83	5	5.68
WDFY3	0	genome.wustl.edu	37	4	85724488	85724488	+	Silent	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	4	85724488	85724488	G	A	SNP	WDFY3	ENST00000295888	human	ensembl	74_37	-1	known	silent	c.2562	p.A854	0.255	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl_sf,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625	tier1	-	-	68	0	0.00	53	4	7.02
WDFY3	0	genome.wustl.edu	37	4	85729487	85729487	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	4	85729487	85729487	C	G	SNP	WDFY3	ENST00000295888	human	ensembl	74_37	-1	known	missense	c.2429	p.R810T	1.000	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_Znf_FYVE,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Znf_FYVE_PHD,superfamily_ConA-like_lec_gl_sf,superfamily_Cyclin-like,superfamily_ARM-type_fold,smart_WD40_repeat,smart_Znf_FYVE,pfscan_BEACH_dom,pfscan_Znf_FYVE-rel,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY3	HGNC	ENSG00000163625	tier1	-	-	142	0	0.00	70	10	12.50
YLPM1	0	genome.wustl.edu	37	14	75265542	75265542	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	14	75265542	75265542	A	G	SNP	YLPM1	ENST00000325680	human	ensembl	74_37	+1	known	missense	c.3542	p.Y1181C	0.996	NULL	superfamily_P-loop_NTPase	-	no_errors	YLPM1	HGNC	ENSG00000119596	tier1	-	-	91	0	0.00	49	19	27.94
ZDHHC18	0	genome.wustl.edu	37	1	27159089	27159089	+	Frame_Shift_Del	DEL	A	A	-			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	1	27159089	27159089	A	-	DEL	ZDHHC18	ENST00000374142	human	ensembl	74_37	+1	known	frame_shift_del	c.487	p.K163fs	1.000	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC18	HGNC	ENSG00000204160	tier1			28	0	0.00	8	2	20.00
ZFHX4	0	genome.wustl.edu	37	8	77767813	77767813	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	8	77767813	77767813	T	G	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.8656	p.F2886V	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	26	0	0.00	12	16	57.14
ZMIZ1	0	genome.wustl.edu	37	10	81072411	81072411	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	10	81072411	81072411	C	G	SNP	ZMIZ1	ENST00000334512	human	ensembl	74_37	+1	known	missense	c.3109	p.L1037V	1.000	NULL	pfam_Znf_MIZ,pfscan_Znf_MIZ	-	no_errors	ZMIZ1	HGNC	ENSG00000108175	tier1	-	-	121	0	0.00	33	26	44.07
ZNF10	0	genome.wustl.edu	37	12	133732691	133732691	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	12	133732691	133732691	C	A	SNP	ZNF10	ENST00000248211	human	ensembl	74_37	+1	known	missense	c.859	p.H287N	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF10	HGNC	ENSG00000256223				77	0	0.00	30	2	6.06
ZNF223	0	genome.wustl.edu	37	19	44570526	44570526	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	44570526	44570526	G	T	SNP	ZNF223	ENST00000591793	human	ensembl	74_37	+1	known	missense	c.875	p.G292V	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF223	Uniprot_gn	ENSG00000267022	tier1	-	-	107	0	0.00	64	4	5.88
ZNF273	0	genome.wustl.edu	37	7	64388069	64388069	+	Silent	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	7	64388069	64388069	G	A	SNP	ZNF273	ENST00000476120	human	ensembl	74_37	+1	known	silent	c.363	p.K121	0.011	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF273	HGNC	ENSG00000198039				122	0	0.00	61	4	6.15
ZNF320	0	genome.wustl.edu	37	19	53384797	53384797	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	53384797	53384797	G	T	SNP	ZNF320	ENST00000391781	human	ensembl	74_37	-1	known	nonsense	c.582	p.C194*	0.993	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF320	HGNC	ENSG00000182986				98	0	0.00	43	3	6.52
ZNF341	0	genome.wustl.edu	37	20	32332933	32332933	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	20	32332933	32332933	G	T	SNP	ZNF341	ENST00000375200	human	ensembl	74_37	+1	known	missense	c.167	p.G56V	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF341	HGNC	ENSG00000131061	tier1	-	-	56	0	0.00	43	4	8.51
ZNF451	0	genome.wustl.edu	37	6	57012272	57012272	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	6	57012272	57012272	G	T	SNP	ZNF451	ENST00000370706	human	ensembl	74_37	+1	known	missense	c.1389	p.Q463H	0.038	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF451	HGNC	ENSG00000112200				107	0	0.00	47	3	6.00
ZNF585B	0	genome.wustl.edu	37	19	37677429	37677429	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	37677429	37677429	T	C	SNP	ZNF585B	ENST00000532828	human	ensembl	74_37	-1	known	missense	c.1010	p.N337S	0.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF585B	HGNC	ENSG00000245680	tier1	-	-	82	0	0.00	17	14	45.16
ZNF623	0	genome.wustl.edu	37	8	144733632	144733632	+	Silent	SNP	G	G	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	8	144733632	144733632	G	T	SNP	ZNF623	ENST00000501748	human	ensembl	74_37	+1	known	silent	c.1590	p.G530	0.001	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF623	HGNC	ENSG00000183309				83	0	0.00	56	4	6.67
ZNF626	0	genome.wustl.edu	37	19	20808428	20808428	+	Silent	SNP	A	A	C			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	20808428	20808428	A	C	SNP	ZNF626	ENST00000601440	human	ensembl	74_37	-1	known	silent	c.255	p.L85	0.098	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF626	HGNC	ENSG00000188171	tier1	-	-	120	0	0.00	29	15	34.09
ZNF629	0	genome.wustl.edu	37	16	30793915	30793915	+	Silent	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	16	30793915	30793915	G	A	SNP	ZNF629	ENST00000262525	human	ensembl	74_37	-1	known	silent	c.1734	p.F578	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF629	HGNC	ENSG00000102870	tier1	-	-	43	0	0.00	18	6	25.00
ZNF709	0	genome.wustl.edu	37	19	12576269	12576269	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	12576269	12576269	C	A	SNP	ZNF709	ENST00000397732	human	ensembl	74_37	-1	known	missense	c.467	p.R156L	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,pfam_Znf_C2H2_jaz,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF709	HGNC	ENSG00000242852				80	0	0.00	28	2	6.67
ZNF750	0	genome.wustl.edu	37	17	80789490	80789490	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	17	80789490	80789490	G	A	SNP	ZNF750	ENST00000269394	human	ensembl	74_37	-1	known	missense	c.841	p.P281S	1.000	NULL	NULL	-	no_errors	ZNF750	HGNC	ENSG00000141579	tier1	-	-	152	0	0.00	40	39	49.37
ZNF780B	0	genome.wustl.edu	37	19	40540576	40540576	+	Silent	SNP	G	G	A			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	19	40540576	40540576	G	A	SNP	ZNF780B	ENST00000434248	human	ensembl	74_37	-1	known	silent	c.2190	p.C730	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF780B	HGNC	ENSG00000128000				84	0	0.00	38	3	7.32
ZPLD1	0	genome.wustl.edu	37	3	102187857	102187857	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HX-01A-11D-A33E-09	TCGA-LN-A7HX-10A-01D-A33H-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	6873970b-b435-40cc-95a1-ed5d858dbef3	24122e83-d0d6-4e3c-9aaa-7d3edeae0b8e	3	102187857	102187857	C	T	SNP	ZPLD1	ENST00000306176	human	ensembl	74_37	+1	known	missense	c.859	p.R287W	1.000	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	ZPLD1	HGNC	ENSG00000170044				73	0	0.00	34	2	5.56
