Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCB5	0	genome.wustl.edu	37	7	20766663	20766663	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	7	20766663	20766663	A	G	SNP	ABCB5	ENST00000258738	human	ensembl	74_37	+1	known	missense	c.1291	p.I431V	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,pfam_ABC_ATPase_put,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB5	HGNC	ENSG00000004846	tier1	-	-	43	0	0.00	27	14	34.15
ABHD14B	0	genome.wustl.edu	37	3	52003994	52003994	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	52003994	52003994	C	G	SNP	ABHD14B	ENST00000361143	human	ensembl	74_37	-1	known	missense	c.418	p.D140H	1.000	NULL	NULL	-	no_errors	ABHD14B	HGNC	ENSG00000114779	tier1	-	-	55	0	0.00	15	23	60.53
ACPL2	0	genome.wustl.edu	37	3	141006278	141006278	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	141006278	141006278	G	A	SNP	ACPL2	ENST00000286353	human	ensembl	74_37	+1	known	missense	c.488	p.G163E	1.000	pfam_His_Pase_superF_clade-2	pfam_His_Pase_superF_clade-2	-	no_errors	ACPL2	HGNC	ENSG00000155893	tier1	-	-	36	0	0.00	37	8	17.78
ADAM12	0	genome.wustl.edu	37	10	127708373	127708373	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	10	127708373	127708373	G	C	SNP	ADAM12	ENST00000368679	human	ensembl	74_37	-1	known	missense	c.2560	p.P854A	1.000	NULL	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM12	HGNC	ENSG00000148848	tier1	-	-	102	0	0.00	79	21	21.00
ADAM23	0	genome.wustl.edu	37	2	207406859	207406859	+	Splice_Site	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	207406859	207406859	G	T	SNP	ADAM23	ENST00000264377	human	ensembl	74_37	+1	known	splice_site	c.656+1	e5+1	1.000	-	-	-	no_errors	ADAM23	HGNC	ENSG00000114948	tier1	-	-	59	0	0.00	23	63	73.26
ADAM29	0	genome.wustl.edu	37	4	175897785	175897785	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	4	175897785	175897785	G	T	SNP	ADAM29	ENST00000359240	human	ensembl	74_37	+1	known	missense	c.1109	p.S370I	0.528	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B,pfam_ADAM_Cys-rich,pfam_Peptidase_M12B_N,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM29	HGNC	ENSG00000168594	tier1	-	-	39	0	0.00	54	8	12.90
AMY2B	0	genome.wustl.edu	37	1	104114305	104114305	+	Silent	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	104114305	104114305	T	C	SNP	AMY2B	ENST00000361355	human	ensembl	74_37	+1	known	silent	c.81	p.S27	1.000	superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY2B	HGNC	ENSG00000240038	tier1	-	-	164	0	0.00	75	77	50.66
ANKK1	0	genome.wustl.edu	37	11	113270738	113270738	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	113270738	113270738	G	A	SNP	ANKK1	ENST00000303941	human	ensembl	74_37	+1	known	missense	c.2047	p.A683T	0.409	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	ANKK1	HGNC	ENSG00000170209	tier1	-	-	57	0	0.00	64	14	17.72
ANKRD30B	0	genome.wustl.edu	37	18	14850253	14850253	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	18	14850253	14850253	G	C	SNP	ANKRD30B	ENST00000358984	human	ensembl	74_37	+1	known	missense	c.3079	p.D1027H	0.900	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30B	HGNC	ENSG00000180777	tier1	-	-	36	0	0.00	22	35	60.34
ANKRD36BP2	0	genome.wustl.edu	37	2	89100923	89100924	+	RNA	INS	-	-	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	89100923	89100924	0	G	INS	ANKRD36BP2	ENST00000393525	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.049:0.030	-	-	-	no_errors	ANKRD36BP2	HGNC	ENSG00000230006				21	0	0.00	34	7	17.07
ARHGAP5	0	genome.wustl.edu	37	14	32561296	32561296	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	14	32561296	32561296	T	C	SNP	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	missense	c.1421	p.V474A	1.000	superfamily_FF_domain,smart_FF_domain	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852	tier1	rs200111638	-	93	0	0.00	149	16	9.70
ARHGEF18	0	genome.wustl.edu	37	19	7506809	7506809	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	7506809	7506809	G	A	SNP	ARHGEF18	ENST00000359920	human	ensembl	74_37	+1	known	missense	c.667	p.A223T	0.998	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF18	HGNC	ENSG00000104880	tier1	-	-	39	0	0.00	35	4	10.26
ARHGEF2	0	genome.wustl.edu	37	1	155928115	155928115	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	155928115	155928115	G	T	SNP	ARHGEF2	ENST00000368315	human	ensembl	74_37	-1	known	missense	c.1544	p.T515N	0.151	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain	-	no_errors	ARHGEF2	HGNC	ENSG00000116584	tier1	-	-	70	0	0.00	62	4	6.06
ASB2	0	genome.wustl.edu	37	14	94413850	94413850	+	Silent	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	14	94413850	94413850	C	A	SNP	ASB2	ENST00000315988	human	ensembl	74_37	-1	known	silent	c.753	p.T251	0.379	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C,prints_Ankyrin_rpt	-	no_errors	ASB2	HGNC	ENSG00000100628	tier1	-	-	71	0	0.00	68	4	5.56
ASCC3	0	genome.wustl.edu	37	6	101099510	101099510	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	101099510	101099510	G	C	SNP	ASCC3	ENST00000369162	human	ensembl	74_37	-1	known	missense	c.3001	p.L1001V	1.000	pfam_Sec63-dom,smart_Sec63-dom	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_AAA+_ATPase,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ASCC3	HGNC	ENSG00000112249	tier1	-	-	157	0	0.00	135	38	21.97
ASPG	0	genome.wustl.edu	37	14	104573571	104573571	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	14	104573571	104573571	C	T	SNP	ASPG	ENST00000455920	human	ensembl	74_37	+1	known	missense	c.1322	p.A441V	0.839	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Asparaginase/glutaminase,pfam_Ankyrin_rpt,superfamily_Asparaginase/glutaminase,superfamily_Ankyrin_rpt-contain_dom,smart_Asparaginase/glutaminase,smart_Ankyrin_rpt,prints_Asparaginase/glutaminase,prints_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_AsnASEI	-	no_errors	ASPG	HGNC	ENSG00000166183	tier1	-	-	99	0	0.00	72	4	5.26
ATAD2	0	genome.wustl.edu	37	8	124358392	124358392	+	Silent	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	8	124358392	124358392	T	C	SNP	ATAD2	ENST00000287394	human	ensembl	74_37	-1	known	silent	c.2466	p.V822	0.463	superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,pfam_Bromodomain,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_AAA+_ATPase,smart_Bromodomain,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	ATAD2	HGNC	ENSG00000156802	tier1	-	-	70	0	0.00	54	38	41.30
ATP2B2	0	genome.wustl.edu	37	3	10442741	10442741	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	10442741	10442741	C	T	SNP	ATP2B2	ENST00000352432	human	ensembl	74_37	-1	known	missense	c.677	p.G226D	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B2	HGNC	ENSG00000157087	tier1	-	-	73	0	0.00	69	20	22.47
ATP4B	0	genome.wustl.edu	37	13	114307313	114307313	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	13	114307313	114307313	C	T	SNP	ATP4B	ENST00000335288	human	ensembl	74_37	-1	known	missense	c.430	p.A144T	0.944	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	pfam_Na/K_ATPase_sub_beta,tigrfam_Na/K_ATPase_sub_beta	-	no_errors	ATP4B	HGNC	ENSG00000186009				29	0	0.00	21	2	8.70
B3GAT2	0	genome.wustl.edu	37	6	71666093	71666093	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	71666093	71666093	G	A	SNP	B3GAT2	ENST00000230053	human	ensembl	74_37	-1	known	missense	c.40	p.P14S	1.000	NULL	pfam_Glyco_trans_43	-	no_errors	B3GAT2	HGNC	ENSG00000112309	tier1	-	-	87	0	0.00	48	29	37.18
B4GALT3	0	genome.wustl.edu	37	1	161143503	161143503	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	161143503	161143503	T	C	SNP	B4GALT3	ENST00000319769	human	ensembl	74_37	-1	known	missense	c.695	p.Q232R	1.000	pfam_Galactosyl_T_C,prints_Galactosyl_T	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT3	HGNC	ENSG00000158850	tier1	-	-	118	0	0.00	79	31	28.18
BACH1	0	genome.wustl.edu	37	21	30693632	30693632	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	21	30693632	30693632	T	C	SNP	BACH1	ENST00000286800	human	ensembl	74_37	+1	known	missense	c.31	p.Y11H	1.000	superfamily_BTB/POZ_fold	pfam_BTB_POZ,pfam_bZIP,superfamily_BTB/POZ_fold,superfamily_TF_DNA-bd,smart_BTB/POZ-like,smart_bZIP,pfscan_BTB/POZ-like,pfscan_bZIP	-	no_errors	BACH1	HGNC	ENSG00000156273	tier1	-	-	38	0	0.00	24	9	27.27
BCL7A	0	genome.wustl.edu	37	12	122473259	122473259	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	122473259	122473259	G	T	SNP	BCL7A	ENST00000538010	human	ensembl	74_37	+1	known	missense	c.197	p.G66V	1.000	NULL	pfam_BCL7	-	no_errors	BCL7A	HGNC	ENSG00000110987	tier1	-	-	71	0	0.00	65	4	5.80
BMP6	0	genome.wustl.edu	37	6	7880462	7880462	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	7880462	7880462	G	A	SNP	BMP6	ENST00000283147	human	ensembl	74_37	+1	known	silent	c.1428	p.P476	0.942	pfam_TGF-b_C,smart_TGF-b_C	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	BMP6	HGNC	ENSG00000153162	tier1	-	-	72	0	0.00	54	4	6.90
BMX	0	genome.wustl.edu	37	X	15525518	15525518	+	RNA	SNP	T	T	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	X	15525518	15525518	T	A	SNP	BMX	ENST00000463891	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	BMX	HGNC	ENSG00000102010	tier1	-	-	28	0	0.00	9	21	70.00
BRAT1	0	genome.wustl.edu	37	7	2581386	2581386	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	7	2581386	2581386	C	T	SNP	BRAT1	ENST00000340611	human	ensembl	74_37	-1	known	missense	c.1100	p.R367H	0.323	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	BRAT1	HGNC	ENSG00000106009				58	0	0.00	38	4	9.52
BUB1B	0	genome.wustl.edu	37	15	40509785	40509785	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	15	40509785	40509785	G	T	SNP	BUB1B	ENST00000412359	human	ensembl	74_37	+1	known	missense	c.2809	p.D937Y	0.074	NULL	pfam_Mad3_BUB1_I,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Mad3_BUB1_I	-	no_errors	BUB1B	HGNC	ENSG00000156970	tier1	-	-	84	0	0.00	52	14	21.21
C14orf166	0	genome.wustl.edu	37	14	52466445	52466445	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	14	52466445	52466445	G	A	SNP	C14orf166	ENST00000261700	human	ensembl	74_37	+1	known	silent	c.393	p.K131	1.000	pfam_UPF0568	pfam_UPF0568	-	no_errors	C14orf166	HGNC	ENSG00000087302	tier1	-	-	49	0	0.00	32	21	39.62
C16orf62	0	genome.wustl.edu	37	16	19590313	19590313	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	16	19590313	19590313	C	T	SNP	C16orf62	ENST00000448695	human	ensembl	74_37	+1	known	missense	c.7	p.P3S	0.000	NULL	NULL	-	no_errors	C16orf62	HGNC	ENSG00000103544	tier1	-	-	36	0	0.00	27	17	38.64
C2orf68	0	genome.wustl.edu	37	2	85839075	85839075	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	85839075	85839075	G	T	SNP	C2orf68	ENST00000306336	human	ensembl	74_37	-1	known	missense	c.33	p.H11Q	0.491	pfam_UPF0561	pfam_UPF0561	-	no_errors	C2orf68	HGNC	ENSG00000168887	tier1	-	-	14	0	0.00	9	6	40.00
C9orf91	0	genome.wustl.edu	37	9	117386549	117386549	+	RNA	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	9	117386549	117386549	G	A	SNP	C9orf91	ENST00000471206	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	C9orf91	HGNC	ENSG00000157693	tier1	-	-	15	0	0.00	9	15	62.50
CBFA2T2	0	genome.wustl.edu	37	20	32212784	32212784	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	20	32212784	32212784	C	G	SNP	CBFA2T2	ENST00000346541	human	ensembl	74_37	+1	known	missense	c.934	p.L312V	0.692	prints_MTGR1	pfam_NHR2,pfam_TAFH_NHR1,pfam_Znf_MYND,smart_TAFH_NHR1,pfscan_TAFH_NHR1,pfscan_Znf_MYND,prints_ETO,prints_MTGR1	-	no_errors	CBFA2T2	HGNC	ENSG00000078699	tier1	-	-	76	0	0.00	108	6	5.26
CCDC102B	0	genome.wustl.edu	37	18	66504325	66504325	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	18	66504325	66504325	G	T	SNP	CCDC102B	ENST00000319445	human	ensembl	74_37	+1	known	missense	c.325	p.V109F	1.000	NULL	NULL	-	no_errors	CCDC102B	HGNC	ENSG00000150636	tier1	-	-	65	0	0.00	24	50	67.57
CCDC148	0	genome.wustl.edu	37	2	159028672	159028672	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	159028672	159028672	G	A	SNP	CCDC148	ENST00000283233	human	ensembl	74_37	-1	known	nonsense	c.1729	p.Q577*	0.984	NULL	NULL	-	no_errors	CCDC148	HGNC	ENSG00000153237	tier1	-	-	38	0	0.00	34	15	30.61
CCDC27	0	genome.wustl.edu	37	1	3680269	3680269	+	Splice_Site	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	3680269	3680269	G	T	SNP	CCDC27	ENST00000294600	human	ensembl	74_37	+1	known	splice_site	c.1322-1	e8-1	0.958	-	-	-	no_errors	CCDC27	HGNC	ENSG00000162592				55	0	0.00	25	2	7.41
CCDC80	0	genome.wustl.edu	37	3	112358594	112358594	+	Silent	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	112358594	112358594	C	T	SNP	CCDC80	ENST00000206423	human	ensembl	74_37	-1	known	silent	c.159	p.R53	1.000	NULL	NULL	-	no_errors	CCDC80	HGNC	ENSG00000091986	tier1	-	-	79	0	0.00	92	5	5.15
CD1B	0	genome.wustl.edu	37	1	158299306	158299306	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	158299306	158299306	C	T	SNP	CD1B	ENST00000368168	human	ensembl	74_37	-1	known	missense	c.740	p.G247D	0.029	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1B	HGNC	ENSG00000158485	tier1	-	-	93	0	0.00	83	30	26.55
CDH12	0	genome.wustl.edu	37	5	21760720	21760720	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	5	21760720	21760720	C	G	SNP	CDH12	ENST00000382254	human	ensembl	74_37	-1	known	missense	c.1580	p.R527T	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH12	HGNC	ENSG00000154162	tier1	-	-	86	0	0.00	109	7	6.03
CEP290	0	genome.wustl.edu	37	12	88478393	88478393	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	88478393	88478393	C	A	SNP	CEP290	ENST00000309041	human	ensembl	74_37	-1	known	missense	c.4680	p.K1560N	0.966	NULL	NULL	-	no_errors	CEP290	HGNC	ENSG00000198707	tier1	-	-	81	0	0.00	84	19	18.45
CES1	0	genome.wustl.edu	37	16	55866958	55866958	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	16	55866958	55866958	G	A	SNP	CES1	ENST00000360526	human	ensembl	74_37	-1	known	missense	c.10	p.R4C	0.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3	-	no_errors	CES1	HGNC	ENSG00000198848	tier1	-	-	258	0	0.00	242	47	16.26
CHAT	0	genome.wustl.edu	37	10	50835782	50835782	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	10	50835782	50835782	G	A	SNP	CHAT	ENST00000337653	human	ensembl	74_37	+1	known	silent	c.1062	p.T354	0.736	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CHAT	HGNC	ENSG00000070748				46	0	0.00	14	2	12.50
CHD9	0	genome.wustl.edu	37	16	53279712	53279712	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	16	53279712	53279712	A	G	SNP	CHD9	ENST00000398510	human	ensembl	74_37	+1	known	missense	c.3404	p.N1135S	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD9	HGNC	ENSG00000177200	tier1	-	-	114	0	0.00	69	38	35.51
CNOT1	0	genome.wustl.edu	37	16	58577401	58577401	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	16	58577401	58577401	T	C	SNP	CNOT1	ENST00000441024	human	ensembl	74_37	-1	known	missense	c.4544	p.N1515S	0.000	NULL	superfamily_ARM-type_fold	-	no_errors	CNOT1	HGNC	ENSG00000125107	tier1	-	-	90	0	0.00	57	40	41.24
CNTN1	0	genome.wustl.edu	37	12	41408076	41408076	+	Silent	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	41408076	41408076	C	T	SNP	CNTN1	ENST00000347616	human	ensembl	74_37	+1	known	silent	c.2160	p.N720	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN1	HGNC	ENSG00000018236				68	0	0.00	67	4	5.63
CNTNAP2	0	genome.wustl.edu	37	7	147092722	147092722	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	7	147092722	147092722	A	C	SNP	CNTNAP2	ENST00000361727	human	ensembl	74_37	+1	known	missense	c.1520	p.N507T	0.972	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,pfam_EG-like_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP2	HGNC	ENSG00000174469	tier1	-	-	61	0	0.00	80	26	24.53
COCH	0	genome.wustl.edu	37	14	31348140	31348140	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	14	31348140	31348140	C	A	SNP	COCH	ENST00000216361	human	ensembl	74_37	+1	known	missense	c.363	p.F121L	1.000	pfam_LCCL,superfamily_LCCL,pfscan_LCCL	pfam_VWF_A,pfam_LCCL,superfamily_LCCL,smart_LCCL,smart_VWF_A,pfscan_LCCL,pfscan_VWF_A	-	no_errors	COCH	HGNC	ENSG00000100473	tier1	-	-	48	0	0.00	33	25	43.10
COL24A1	0	genome.wustl.edu	37	1	86512550	86512550	+	Silent	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	86512550	86512550	G	T	SNP	COL24A1	ENST00000370571	human	ensembl	74_37	-1	known	silent	c.1908	p.G636	0.692	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL24A1	HGNC	ENSG00000171502				75	0	0.00	90	5	5.26
COL9A2	0	genome.wustl.edu	37	1	40782797	40782797	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	40782797	40782797	T	A	SNP	COL9A2	ENST00000372748	human	ensembl	74_37	-1	known	missense	c.73	p.I25F	1.000	NULL	pfam_Collagen	-	no_errors	COL9A2	HGNC	ENSG00000049089	tier1	-	-	71	0	0.00	51	110	68.32
CRIM1	0	genome.wustl.edu	37	2	36691738	36691738	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	36691738	36691738	A	C	SNP	CRIM1	ENST00000280527	human	ensembl	74_37	+1	known	missense	c.931	p.I311L	1.000	NULL	pfam_VWF_C,pfam_Antistasin-like,superfamily_Hirudin/antistatin,smart_IGFBP-like,smart_VWC_out,smart_VWF_C,pfscan_VWF_C	-	no_errors	CRIM1	HGNC	ENSG00000150938	tier1	-	-	101	0	0.00	112	30	21.13
CSF1R	0	genome.wustl.edu	37	5	149459676	149459676	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	5	149459676	149459676	G	A	SNP	CSF1R	ENST00000286301	human	ensembl	74_37	-1	known	silent	c.531	p.C177	0.232	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,smart_Ig_sub	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	CSF1R	HGNC	ENSG00000182578				26	0	0.00	48	4	7.69
CSMD3	0	genome.wustl.edu	37	8	113563014	113563014	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	8	113563014	113563014	C	A	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	nonsense	c.4450	p.E1484*	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	76	0	0.00	84	38	30.89
CSN2	0	genome.wustl.edu	37	4	70823225	70823225	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	4	70823225	70823225	G	T	SNP	CSN2	ENST00000353151	human	ensembl	74_37	-1	known	missense	c.442	p.P148T	0.084	pfam_Casein,pirsf_Casein_beta	pfam_Casein,pirsf_Casein_beta	-	no_errors	CSN2	HGNC	ENSG00000135222	tier1	-	-	67	0	0.00	52	19	26.76
CX3CR1	0	genome.wustl.edu	37	3	39307268	39307268	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	39307268	39307268	T	C	SNP	CX3CR1	ENST00000358309	human	ensembl	74_37	-1	known	missense	c.829	p.T277A	0.997	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_CX3CR1,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Duffy_chemokine_rcpt,prints_Chemokine_CXCR4	-	no_errors	CX3CR1	HGNC	ENSG00000168329	tier1	-	-	44	0	0.00	14	20	58.82
CYP1A1	0	genome.wustl.edu	37	15	75014841	75014841	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	15	75014841	75014841	C	G	SNP	CYP1A1	ENST00000379727	human	ensembl	74_37	-1	known	missense	c.598	p.A200P	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP1,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	-	no_errors	CYP1A1	HGNC	ENSG00000140465	tier1	-	-	78	0	0.00	34	17	32.69
CYP1B1	0	genome.wustl.edu	37	2	38297742	38297742	+	RNA	SNP	T	T	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	38297742	38297742	T	A	SNP	CYP1B1	ENST00000494864	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CYP1B1	HGNC	ENSG00000138061	tier1	-	-	8	0	0.00	2	6	75.00
CYP4F35P	0	genome.wustl.edu	37	18	14337526	14337526	+	RNA	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	18	14337526	14337526	C	A	SNP	CYP4F35P	ENST00000582957	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.090	-	-	-	no_errors	CYP4F35P	HGNC	ENSG00000265787	tier1	-	-	38	0	0.00	12	16	57.14
DHRS2	0	genome.wustl.edu	37	14	24114459	24114459	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	14	24114459	24114459	C	G	SNP	DHRS2	ENST00000344777	human	ensembl	74_37	+1	known	missense	c.851	p.S284C	0.676	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DHB_DH,prints_DH_sc/Rdtase_SDR,prints_ADH_insect	-	no_errors	DHRS2	HGNC	ENSG00000100867	tier1	rs144980250	-	35	0	0.00	32	20	38.46
DHX9	0	genome.wustl.edu	37	1	182850531	182850531	+	Silent	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	182850531	182850531	A	G	SNP	DHX9	ENST00000367549	human	ensembl	74_37	+1	known	silent	c.2757	p.L919	0.968	pfam_Helicase-assoc_dom,smart_Helicase-assoc_dom	pfam_dsRNA-bd_dom,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_dsRNA-bd_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_dsRNA-bd_dom	-	no_errors	DHX9	HGNC	ENSG00000135829	tier1	-	-	43	0	0.00	42	18	30.00
DIDO1	0	genome.wustl.edu	37	20	61513761	61513761	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	20	61513761	61513761	C	G	SNP	DIDO1	ENST00000266070	human	ensembl	74_37	-1	known	missense	c.3547	p.E1183Q	1.000	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,pfam_Znf_PHD-finger,superfamily_TFIIS_cen_dom,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_TFS2M,pfscan_Znf_PHD-finger	-	no_errors	DIDO1	HGNC	ENSG00000101191	tier1	-	-	66	0	0.00	43	33	43.42
DNAH5	0	genome.wustl.edu	37	5	13719067	13719067	+	Silent	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	5	13719067	13719067	T	C	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	silent	c.12423	p.T4141	0.555	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	32	0	0.00	67	17	20.24
DNAH5	0	genome.wustl.edu	37	5	13719141	13719141	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	5	13719141	13719141	T	A	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.12349	p.I4117L	0.003	pfam_Dynein_heavy_dom	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	24	0	0.00	39	16	29.09
DPPA3P2	0	genome.wustl.edu	37	14	36840759	36840759	+	RNA	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	14	36840759	36840759	C	T	SNP	DPPA3P2	ENST00000557188	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.066	-	-	-	no_errors	DPPA3P2	HGNC	ENSG00000188831	tier1	-	-	122	0	0.00	105	35	25.00
DYRK4	0	genome.wustl.edu	37	12	4705422	4705422	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	4705422	4705422	G	A	SNP	DYRK4	ENST00000010132	human	ensembl	74_37	+1	known	silent	c.390	p.V130	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK4	HGNC	ENSG00000010219	tier1	-	-	48	0	0.00	9	10	52.63
EDN2	0	genome.wustl.edu	37	1	41945149	41945149	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	41945149	41945149	G	0	DEL	EDN2	ENST00000372587	human	ensembl	74_37	-1	known	frame_shift_del	c.468	p.F157fs	0.001	NULL	pfam_Endothln-like_toxin,smart_Endothln-like_toxin,prints_Bibrotoxin/Sarafotoxin-D	-	no_errors	EDN2	HGNC	ENSG00000127129				81	0	0.00	129	12	8.51
EEF2	0	genome.wustl.edu	37	19	3982015	3982015	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	3982015	3982015	G	A	SNP	EEF2	ENST00000309311	human	ensembl	74_37	-1	known	missense	c.827	p.S276L	1.000	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFG/EF2_IV,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Transl_B-barrel,superfamily_EFG_III-V,smart_Transl_elong_EFG/EF2_IV,smart_EFG_V,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EEF2	HGNC	ENSG00000167658	tier1	-	-	83	0	0.00	61	18	22.78
EGR1	0	genome.wustl.edu	37	5	137803304	137803304	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	5	137803304	137803304	C	T	SNP	EGR1	ENST00000239938	human	ensembl	74_37	+1	known	missense	c.1166	p.T389I	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_DUF3432,pfam_DUF3446,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR1	HGNC	ENSG00000120738				52	0	0.00	36	2	5.26
ELMSAN1	0	genome.wustl.edu	37	14	74196531	74196531	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	14	74196531	74196531	G	C	SNP	ELMSAN1	ENST00000286523	human	ensembl	74_37	-1	known	missense	c.1907	p.S636C	1.000	NULL	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	ELMSAN1	HGNC	ENSG00000156030	tier1	-	-	51	0	0.00	45	26	36.62
EML3	0	genome.wustl.edu	37	11	62379057	62379057	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	62379057	62379057	C	T	SNP	EML3	ENST00000529309	human	ensembl	74_37	-1	known	missense	c.34	p.A12T	0.995	NULL	pfam_HELP,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML3	HGNC	ENSG00000149499	tier1	-	-	72	0	0.00	48	4	7.69
EML6	0	genome.wustl.edu	37	2	55074758	55074758	+	Silent	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	55074758	55074758	C	G	SNP	EML6	ENST00000356458	human	ensembl	74_37	+1	novel	silent	c.1185	p.V395	1.000	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_HELP,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	EML6	HGNC	ENSG00000214595	tier1	-	-	72	0	0.00	33	36	52.17
ENSG00000189275	0	genome.wustl.edu	37	10	133608085	133608085	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	10	133608085	133608085	G	C	SNP	ENSG00000189275	ENST00000341866	human	ensembl	74_37	-1	known	missense	c.291	p.I97M	0.000	NULL	NULL	-	no_errors	AL450307.1	Clone_based_ensembl_gene	ENSG00000189275	tier1	-	-	48	0	0.00	32	8	20.00
ENSG00000203849	0	genome.wustl.edu	37	1	142714797	142714797	+	RNA	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	142714797	142714797	A	G	SNP	ENSG00000203849	ENST00000610091	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-417J8.6	Clone_based_vega_gene	ENSG00000203849	tier1	-	-	20	0	0.00	20	6	23.08
ENSG00000221550	0	genome.wustl.edu	37	1	29580122	29580122	+	RNA	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	29580122	29580122	A	G	SNP	ENSG00000221550	ENST00000408623	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.096	-	-	-	no_errors	AL645859.1	Clone_based_ensembl_gene	ENSG00000221550	tier1	-	-	48	0	0.00	18	11	37.93
ENSG00000221756	0	genome.wustl.edu	37	13	27894248	27894248	+	RNA	SNP	T	T	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	13	27894248	27894248	T	A	SNP	ENSG00000221756	ENST00000408829	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.124	-	-	-	no_errors	AL159977.1	Clone_based_ensembl_gene	ENSG00000221756	tier1	-	-	84	0	0.00	33	36	52.17
ENSG00000235077	0	genome.wustl.edu	37	7	99737930	99737930	+	RNA	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	7	99737930	99737930	G	T	SNP	ENSG00000235077	ENST00000376482	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	AC073842.19	Clone_based_vega_gene	ENSG00000235077	tier1	-	-	45	0	0.00	29	17	36.96
ENSG00000235615	0	genome.wustl.edu	37	2	132724261	132724261	+	RNA	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	132724261	132724261	C	T	SNP	ENSG00000235615	ENST00000419362	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	AJ239322.1	Clone_based_vega_gene	ENSG00000235615	tier1	-	-	38	0	0.00	73	5	6.41
ENSG00000235994	0	genome.wustl.edu	37	6	168377135	168377136	+	RNA	INS	-	-	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	168377135	168377136	-	G	INS	ENSG00000235994	ENST00000538528	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.990:0.992	-	-	-	no_errors	RP3-470B24.5	Clone_based_vega_gene	ENSG00000235994	tier1			159	0	0.00	66	5	7.04
ENSG00000235994	0	genome.wustl.edu	37	6	168377136	168377137	+	RNA	INS	-	-	GTG			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	168377136	168377137	-	GTG	INS	ENSG00000235994	ENST00000538528	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.992:0.996	-	-	-	no_errors	RP3-470B24.5	Clone_based_vega_gene	ENSG00000235994	tier1			157	0	0.00	66	5	7.04
ENSG00000235994	0	genome.wustl.edu	37	6	168377161	168377161	+	RNA	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	168377161	168377161	T	C	SNP	ENSG00000235994	ENST00000538528	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.306	-	-	-	no_errors	RP3-470B24.5	Clone_based_vega_gene	ENSG00000235994	tier1	rs113533593	-	136	0	0.00	55	6	9.84
ENSG00000244306	0	genome.wustl.edu	37	14	19856372	19856372	+	RNA	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	14	19856372	19856372	A	G	SNP	ENSG00000244306	ENST00000551334	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306				21	0	0.00	29	3	9.38
ENSG00000257671	0	genome.wustl.edu	37	12	52639132	52639132	+	RNA	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	52639132	52639132	C	T	SNP	ENSG00000257671	ENST00000546686	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP3-416H24.1	Clone_based_vega_gene	ENSG00000257671	tier1	-	-	54	0	0.00	67	4	5.63
ENSG00000259326	0	genome.wustl.edu	37	15	38795603	38795603	+	RNA	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	15	38795603	38795603	C	A	SNP	ENSG00000259326	ENST00000560231	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-102L12.2	Clone_based_vega_gene	ENSG00000259326	tier1	-	-	48	0	0.00	41	8	16.33
ENSG00000259583	0	genome.wustl.edu	37	15	101454857	101454857	+	RNA	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	15	101454857	101454857	G	T	SNP	ENSG00000259583	ENST00000560068	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-66B24.4	Clone_based_vega_gene	ENSG00000259583	tier1	-	-	35	0	0.00	27	4	12.90
ENSG00000259966	0	genome.wustl.edu	37	16	32611670	32611670	+	RNA	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	16	32611670	32611670	C	A	SNP	ENSG00000259966	ENST00000562976	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	RP11-652G5.1	Clone_based_vega_gene	ENSG00000259966	tier1	-	-	82	0	0.00	88	24	21.43
EPHA2	0	genome.wustl.edu	37	1	16456798	16456798	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	16456798	16456798	G	T	SNP	EPHA2	ENST00000358432	human	ensembl	74_37	-1	known	missense	c.2592	p.F864L	0.637	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,pfam_Interferon_alpha/beta_rcpt_bsu,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA2	HGNC	ENSG00000142627	tier1	-	-	87	0	0.00	48	7	12.73
EPS8	0	genome.wustl.edu	37	12	15777165	15777165	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	15777165	15777165	G	C	SNP	EPS8	ENST00000281172	human	ensembl	74_37	-1	known	missense	c.2221	p.P741A	1.000	superfamily_SAM/pointed	pfam_PTB,pfam_SH3_domain,pfam_PTB/PI_dom,pfam_SH3_2,superfamily_SH3_domain,superfamily_SAM/pointed,smart_PTB/PI_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	EPS8	HGNC	ENSG00000151491	tier1	-	-	69	0	0.00	33	24	42.11
ERCC5	0	genome.wustl.edu	37	13	103524642	103524642	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	13	103524642	103524642	C	T	SNP	ERCC5	ENST00000355739	human	ensembl	74_37	+1	known	missense	c.2773	p.P925S	0.940	superfamily_5-3_exonuclease_C,tigrfam_XPG/Rad2_eukaryotes	pfam_XPG_DNA_repair_N,pfam_XPG-I_dom,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG-I_dom,smart_HhH2,prints_XPG/Rad2_eukaryotes,prints_XPG/Rad2,tigrfam_XPG/Rad2_eukaryotes	-	no_errors	ERCC5	HGNC	ENSG00000134899	tier1	-	-	65	0	0.00	36	41	53.25
ESPN	0	genome.wustl.edu	37	1	6521428	6521428	+	RNA	SNP	T	T	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	6521428	6521428	T	G	SNP	ESPN	ENST00000468561	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ESPN	HGNC	ENSG00000187017	tier1	-	-	24	0	0.00	12	4	25.00
FAIM	0	genome.wustl.edu	37	3	138341108	138341108	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	138341108	138341108	A	G	SNP	FAIM	ENST00000338446	human	ensembl	74_37	+1	known	missense	c.292	p.T98A	1.000	pfam_FAIM	pfam_FAIM	-	no_errors	FAIM	HGNC	ENSG00000158234	tier1	-	-	134	0	0.00	132	88	39.82
FAM102A	0	genome.wustl.edu	37	9	130742450	130742450	+	RNA	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	9	130742450	130742450	G	A	SNP	FAM102A	ENST00000494606	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.950	-	-	-	no_errors	FAM102A	HGNC	ENSG00000167106	tier1	-	-	54	0	0.00	14	29	67.44
FAM105A	0	genome.wustl.edu	37	5	14610525	14610525	+	RNA	SNP	T	T	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	5	14610525	14610525	T	A	SNP	FAM105A	ENST00000506258	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM105A	HGNC	ENSG00000145569	tier1	-	-	25	0	0.00	32	11	25.58
FAM129B	0	genome.wustl.edu	37	9	130286098	130286098	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	9	130286098	130286098	G	A	SNP	FAM129B	ENST00000373312	human	ensembl	74_37	-1	known	missense	c.449	p.P150L	1.000	pfscan_Pleckstrin_homology	pfscan_Pleckstrin_homology	-	no_errors	FAM129B	HGNC	ENSG00000136830	tier1	-	-	39	0	0.00	9	11	55.00
FAM179B	0	genome.wustl.edu	37	14	45542728	45542728	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	14	45542728	45542728	G	C	SNP	FAM179B	ENST00000361577	human	ensembl	74_37	+1	known	missense	c.5127	p.E1709D	0.992	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FAM179B	HGNC	ENSG00000198718	tier1	-	-	37	0	0.00	43	24	35.82
FAM19A5	0	genome.wustl.edu	37	22	49103579	49103579	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	22	49103579	49103579	G	T	SNP	FAM19A5	ENST00000358295	human	ensembl	74_37	+1	known	missense	c.292	p.G98W	1.000	pfam_Chemokine-like_FAM19A2	pfam_Chemokine-like_FAM19A2	-	no_errors	FAM19A5	HGNC	ENSG00000219438				67	0	0.00	47	4	7.84
FAM43B	0	genome.wustl.edu	37	1	20879570	20879570	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	20879570	20879570	G	C	SNP	FAM43B	ENST00000332947	human	ensembl	74_37	+1	known	missense	c.104	p.S35T	1.000	NULL	smart_PTB/PI_dom	-	no_errors	FAM43B	HGNC	ENSG00000183114	tier1	-	-	44	0	0.00	15	10	40.00
FAM83G	0	genome.wustl.edu	37	17	18874831	18874831	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	17	18874831	18874831	G	A	SNP	FAM83G	ENST00000345041	human	ensembl	74_37	-1	known	silent	c.2313	p.T771	0.135	NULL	pfam_DUF1669	-	no_errors	FAM83G	HGNC	ENSG00000188522	tier1	-	-	119	0	0.00	48	80	62.50
FBLN2	0	genome.wustl.edu	37	3	13670421	13670421	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	13670421	13670421	G	A	SNP	FBLN2	ENST00000404922	human	ensembl	74_37	+1	known	silent	c.2586	p.T862	0.002	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_Anaphylatoxin/fibulin,superfamily_Anaphylatoxin_comp_syst,smart_EG-like_dom,smart_Anaphylatoxin/fibulin,smart_EGF-like_Ca-bd_dom,pfscan_Anaphylatoxin/fibulin,pfscan_EG-like_dom	-	no_errors	FBLN2	HGNC	ENSG00000163520	tier1	-	-	73	0	0.00	51	29	36.25
FCAMR	0	genome.wustl.edu	37	1	207139152	207139152	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	207139152	207139152	T	C	SNP	FCAMR	ENST00000400962	human	ensembl	74_37	-1	known	missense	c.221	p.E74G	0.000	NULL	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	FCAMR	HGNC	ENSG00000162897	tier1	-	-	108	0	0.00	32	66	67.35
FIG4	0	genome.wustl.edu	37	6	110112640	110112640	+	Frame_Shift_Del	DEL	C	C	-			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	110112640	110112640	C	-	DEL	FIG4	ENST00000230124	human	ensembl	74_37	+1	known	frame_shift_del	c.2242	p.S750fs	0.999	NULL	pfam_Syja_N,pfscan_Syja_N	-	no_errors	FIG4	HGNC	ENSG00000112367	tier1			53	0	0.00	37	2	5.13
FN1	0	genome.wustl.edu	37	2	216269251	216269251	+	Silent	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	216269251	216269251	C	T	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	silent	c.3114	p.Q1038	0.988	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				88	0	0.00	75	4	5.06
FOXE1	0	genome.wustl.edu	37	9	100616701	100616706	+	In_Frame_Del	DEL	GCCGCC	GCCGCC	-			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	GCCGCC	GCCGCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	9	100616701	100616706	GCCGCC	0	DEL	FOXE1	ENST00000375123	human	ensembl	74_37	+1	known	in_frame_del	c.505_510	p.AA172in_frame_del	0.602:0.620:0.614:0.750:0.779:0.753	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXE1	HGNC	ENSG00000178919				9	0	0.00	7	3	30.00
FOXG1	0	genome.wustl.edu	37	14	29237879	29237879	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	14	29237879	29237879	C	T	SNP	FOXG1	ENST00000313071	human	ensembl	74_37	+1	known	missense	c.1394	p.T465M	1.000	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXG1	HGNC	ENSG00000176165	tier1	-	-	83	0	0.00	100	10	9.01
FRAT1	0	genome.wustl.edu	37	10	99079857	99079857	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	10	99079857	99079857	C	T	SNP	FRAT1	ENST00000371021	human	ensembl	74_37	+1	known	missense	c.647	p.A216V	0.989	pfam_GSK3-bd	pfam_GSK3-bd	-	no_errors	FRAT1	HGNC	ENSG00000165879	tier1	-	-	58	0	0.00	54	12	17.91
FRMD1	0	genome.wustl.edu	37	6	168461507	168461507	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	168461507	168461507	C	T	SNP	FRMD1	ENST00000283309	human	ensembl	74_37	-1	known	missense	c.1276	p.E426K	0.001	NULL	pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain	-	no_errors	FRMD1	HGNC	ENSG00000153303	tier1	-	-	63	0	0.00	49	29	37.18
FXR1	0	genome.wustl.edu	37	3	180666281	180666281	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	180666281	180666281	G	T	SNP	FXR1	ENST00000357559	human	ensembl	74_37	+1	known	missense	c.417	p.E139D	1.000	NULL	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet-like_dom,superfamily_NA-bd_OB-fold,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FXR1	HGNC	ENSG00000114416				23	0	0.00	37	2	5.13
GAS6	0	genome.wustl.edu	37	13	114541138	114541138	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	13	114541138	114541138	C	A	SNP	GAS6	ENST00000357389	human	ensembl	74_37	-1	known	missense	c.493	p.G165W	0.999	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,pfam_GLA_domain,superfamily_ConA-like_lec_gl_sf,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Laminin_G,prints_GLA_domain	-	no_errors	GAS6	HGNC	ENSG00000183087	tier1	-	-	115	0	0.00	46	54	54.00
GAS7	0	genome.wustl.edu	37	17	9846480	9846480	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	17	9846480	9846480	C	T	SNP	GAS7	ENST00000432992	human	ensembl	74_37	-1	known	missense	c.689	p.G230D	1.000	pfam_FCH_dom,smart_FCH_dom,pfscan_FCH_dom	pfam_FCH_dom,pfam_WW_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_WW_dom,smart_SH3_domain,smart_WW_dom,smart_FCH_dom,pfscan_FCH_dom,pfscan_SH3_domain,pfscan_WW_dom	-	no_errors	GAS7	HGNC	ENSG00000007237	tier1	-	-	58	0	0.00	48	4	7.69
GBP1P1	0	genome.wustl.edu	37	1	89886764	89886764	+	RNA	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	89886764	89886764	C	T	SNP	GBP1P1	ENST00000513638	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GBP1P1	HGNC	ENSG00000225492	tier1	-	-	129	0	0.00	112	26	18.71
GCN1L1	0	genome.wustl.edu	37	12	120586115	120586115	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	120586115	120586115	C	T	SNP	GCN1L1	ENST00000300648	human	ensembl	74_37	-1	known	missense	c.4582	p.A1528T	1.000	superfamily_ARM-type_fold	pfam_DUF3554,pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	GCN1L1	HGNC	ENSG00000089154	tier1	-	-	62	0	0.00	59	4	6.35
GHRHR	0	genome.wustl.edu	37	7	31003737	31003737	+	Silent	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	7	31003737	31003737	G	C	SNP	GHRHR	ENST00000326139	human	ensembl	74_37	+1	known	silent	c.54	p.P18	0.000	prints_GPCR_2_GHRH_rcpt	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_GHRH_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_VIP_rcpt_1	-	no_errors	GHRHR	HGNC	ENSG00000106128	tier1	-	-	145	0	0.00	105	45	30.00
GPS1	0	genome.wustl.edu	37	17	80013949	80013949	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	17	80013949	80013949	C	T	SNP	GPS1	ENST00000355130	human	ensembl	74_37	+1	known	nonsense	c.1027	p.Q343*	1.000	pfam_26S_proteasome_reg_su-Rpn7	pfam_26S_proteasome_reg_su-Rpn7,pfam_PCI_dom,smart_PCI_dom	-	no_errors	GPS1	HGNC	ENSG00000169727	tier1	-	-	51	0	0.00	45	4	8.16
GRIA2	0	genome.wustl.edu	37	4	158256846	158256846	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	4	158256846	158256846	G	C	SNP	GRIA2	ENST00000264426	human	ensembl	74_37	+1	known	missense	c.1290	p.K430N	1.000	pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA2	HGNC	ENSG00000120251	tier1	-	-	63	0	0.00	59	39	39.80
GRIN2B	0	genome.wustl.edu	37	12	13761566	13761566	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	13761566	13761566	C	G	SNP	GRIN2B	ENST00000609686	human	ensembl	74_37	-1	known	missense	c.1981	p.D661H	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_NMDAR2_C,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN2B	HGNC	ENSG00000273079	tier1	-	-	91	0	0.00	41	47	53.41
HBG2	0	genome.wustl.edu	37	11	5275727	5275727	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	5275727	5275727	G	T	SNP	HBG2	ENST00000336906	human	ensembl	74_37	-1	known	missense	c.110	p.P37Q	1.000	pfam_Globin,superfamily_Globin-like,pfscan_Globin,prints_Haemoglobin_b	pfam_Globin,superfamily_Globin-like,pfscan_Globin,prints_Haemoglobin_b,prints_Myoglobin	-	no_errors	HBG2	HGNC	ENSG00000196565				92	0	0.00	68	4	5.56
HERC2P3	0	genome.wustl.edu	37	15	20657659	20657659	+	RNA	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	15	20657659	20657659	C	A	SNP	HERC2P3	ENST00000426501	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HERC2P3	HGNC	ENSG00000180229	tier1	-	-	116	0	0.00	87	24	21.62
HERC4	0	genome.wustl.edu	37	10	69751986	69751986	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	10	69751986	69751986	G	C	SNP	HERC4	ENST00000395198	human	ensembl	74_37	-1	known	missense	c.1241	p.P414R	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,superfamily_HECT,superfamily_RCC1/BLIP-II,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC4	HGNC	ENSG00000148634	tier1	-	-	40	0	0.00	23	5	17.86
HIST1H2AH	0	genome.wustl.edu	37	6	27115271	27115271	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	27115271	27115271	G	C	SNP	HIST1H2AH	ENST00000377459	human	ensembl	74_37	+1	known	missense	c.364	p.E122Q	1.000	superfamily_Histone-fold,smart_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AH	HGNC	ENSG00000184825	tier1	-	-	103	0	0.00	62	39	38.61
HIST1H3C	0	genome.wustl.edu	37	6	26045940	26045940	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	26045940	26045940	T	A	SNP	HIST1H3C	ENST00000540144	human	ensembl	74_37	+1	known	missense	c.302	p.L101Q	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST1H3C	HGNC	ENSG00000196532	tier1	-	-	129	0	0.00	56	34	37.78
HMGN2	0	genome.wustl.edu	37	1	26800609	26800609	+	Frame_Shift_Del	DEL	A	A	-			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	26800609	26800609	A	-	DEL	HMGN2	ENST00000361427	human	ensembl	74_37	+1	known	frame_shift_del	c.124	p.K43fs	1.000	pfam_HMGN_fam,smart_HMGN_fam,prints_HMGN_fam	pfam_HMGN_fam,smart_HMGN_fam,prints_HMGN_fam	-	no_errors	HMGN2	HGNC	ENSG00000198830	tier1			45	0	0.00	45	4	8.16
HRCT1	0	genome.wustl.edu	37	9	35906584	35906586	+	In_Frame_Del	DEL	CCA	CCA	-			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	CCA	CCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	9	35906584	35906586	CCA	-	DEL	HRCT1	ENST00000354323	human	ensembl	74_37	+1	known	in_frame_del	c.300_302	p.H104in_frame_del	0.016:0.009:0.003	NULL	NULL	-	no_errors	HRCT1	HGNC	ENSG00000196196	tier1			22	0	0.00	17	6	26.09
HS6ST1	0	genome.wustl.edu	37	2	129025972	129025972	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	129025972	129025972	T	C	SNP	HS6ST1	ENST00000259241	human	ensembl	74_37	-1	known	missense	c.1000	p.I334V	1.000	pfam_Sulfotransferase	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	HS6ST1	HGNC	ENSG00000136720	tier1	-	-	77	0	0.00	73	41	35.96
HSP90AB2P	0	genome.wustl.edu	37	4	13335101	13335108	+	RNA	DEL	AAACAACA	AAACAACA	-			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	AAACAACA	AAACAACA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	4	13335101	13335108	AAACAACA	0	DEL	HSP90AB2P	ENST00000602906	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003:0.002:0.007:0.003:0.000:0.000:0.000:0.000	-	-	-	no_errors	HSP90AB2P	HGNC	ENSG00000205940				57	0	0.00	47	7	12.96
HSPA1A	0	genome.wustl.edu	37	6	31783686	31783686	+	Silent	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	31783686	31783686	C	T	SNP	HSPA1A	ENST00000375651	human	ensembl	74_37	+1	known	silent	c.153	p.I51	1.000	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA1A	HGNC	ENSG00000204389	tier1	-	-	34	0	0.00	9	17	65.38
ICAM4	0	genome.wustl.edu	37	19	10397718	10397719	+	Frame_Shift_Ins	INS	-	-	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	10397718	10397719	-	T	INS	ICAM4	ENST00000340992	human	ensembl	74_37	+1	known	frame_shift_ins	c.30_31	p.L12fs	0.002:0.004	NULL	pfam_ICAM_N	-	no_errors	ICAM4	HGNC	ENSG00000105371	tier1			18	0	0.00	11	3	21.43
IGDCC4	0	genome.wustl.edu	37	15	65703488	65703488	+	Silent	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	15	65703488	65703488	C	T	SNP	IGDCC4	ENST00000352385	human	ensembl	74_37	-1	novel	silent	c.291	p.Q97	0.326	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	IGDCC4	HGNC	ENSG00000103742	tier1	-	-	78	0	0.00	60	4	6.25
IL1F10	0	genome.wustl.edu	37	2	113831923	113831923	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	113831923	113831923	A	G	SNP	IL1F10	ENST00000341010	human	ensembl	74_37	+1	known	missense	c.50	p.Q17R	0.997	superfamily_Cytokine_IL1-like,smart_IL-1,prints_IL-1RA/IL-36	pfam_IL-1,superfamily_Cytokine_IL1-like,smart_IL-1,prints_IL-1RA/IL-36,prints_IL-1,prints_IL-1_beta	-	no_errors	IL1F10	HGNC	ENSG00000136697	tier1	-	-	48	0	0.00	31	18	36.73
ISOC2	0	genome.wustl.edu	37	19	55966407	55966407	+	Silent	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	55966407	55966407	T	C	SNP	ISOC2	ENST00000085068	human	ensembl	74_37	-1	known	silent	c.534	p.E178	0.995	pfam_Isochorismatase-like,superfamily_Isochorismatase-like	pfam_Isochorismatase-like,superfamily_Isochorismatase-like	-	no_errors	ISOC2	HGNC	ENSG00000063241	tier1	-	-	152	0	0.00	85	57	40.14
KBTBD7	0	genome.wustl.edu	37	13	41767432	41767434	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	13	41767432	41767434	CTG	-	DEL	KBTBD7	ENST00000379483	human	ensembl	74_37	-1	known	in_frame_del	c.962_960	p.S324in_frame_del	0.559:0.829:0.997	pirsf_Kelch-like_gigaxonin	pfam_BTB_POZ,pfam_BACK,pfam_Kelch_1,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KBTBD7	HGNC	ENSG00000120696	tier1			32	0	0.00	19	3	13.64
KIAA1033	0	genome.wustl.edu	37	12	105551051	105551051	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	105551051	105551051	G	T	SNP	KIAA1033	ENST00000332180	human	ensembl	74_37	+1	known	nonsense	c.2863	p.E955*	1.000	NULL	NULL	-	no_errors	KIAA1033	HGNC	ENSG00000136051	tier1	-	-	61	0	0.00	44	18	29.03
KIAA1468	0	genome.wustl.edu	37	18	59925833	59925833	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	18	59925833	59925833	C	T	SNP	KIAA1468	ENST00000256858	human	ensembl	74_37	+1	known	missense	c.2126	p.A709V	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_HEAT_type_2,pfscan_LisH_dimerisation	-	no_errors	KIAA1468	HGNC	ENSG00000134444	tier1	-	-	61	0	0.00	21	43	67.19
KIAA1737	0	genome.wustl.edu	37	14	77572068	77572068	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	14	77572068	77572068	C	G	SNP	KIAA1737	ENST00000361786	human	ensembl	74_37	+1	known	missense	c.17	p.P6R	0.073	NULL	NULL	-	no_errors	KIAA1737	HGNC	ENSG00000198894	tier1	-	-	58	0	0.00	37	15	28.85
KIF26B	0	genome.wustl.edu	37	1	245849500	245849500	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	245849500	245849500	G	T	SNP	KIF26B	ENST00000407071	human	ensembl	74_37	+1	known	missense	c.3215	p.S1072I	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF26B	HGNC	ENSG00000162849	tier1	-	-	14	0	0.00	9	13	59.09
KIR3DL1	0	genome.wustl.edu	37	19	55329985	55329985	+	Silent	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	55329985	55329985	C	A	SNP	KIR3DL1	ENST00000402254	human	ensembl	74_37	+1	known	silent	c.286	p.R96	0.000	pfam_Immunoglobulin,smart_Ig_sub	pfam_Immunoglobulin,smart_Ig_sub	-	no_errors	KIR3DL1	HGNC	ENSG00000167633	tier1	-	-	61	0	0.00	56	15	21.13
KLC2	0	genome.wustl.edu	37	11	66032654	66032654	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	66032654	66032654	A	G	SNP	KLC2	ENST00000316924	human	ensembl	74_37	+1	known	missense	c.1282	p.S428G	0.998	NULL	pfam_Rabaptin_Rab5-bd_dom,pfam_TPR_1,smart_TPR_repeat,prints_Kinesin_light,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	KLC2	HGNC	ENSG00000174996				64	0	0.00	72	4	5.26
KRT79	0	genome.wustl.edu	37	12	53223862	53223862	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	53223862	53223862	C	T	SNP	KRT79	ENST00000330553	human	ensembl	74_37	-1	known	missense	c.800	p.G267D	0.978	pfam_IF	pfam_IF,superfamily_STAT_TF_coiled-coil,prints_Keratin_II	-	no_errors	KRT79	HGNC	ENSG00000185640	tier1	-	-	64	0	0.00	76	4	5.00
KRTAP10-6	0	genome.wustl.edu	37	21	46011332	46011332	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	21	46011332	46011332	C	A	SNP	KRTAP10-6	ENST00000400368	human	ensembl	74_37	-1	known	missense	c.1034	p.C345F	1.000	NULL	NULL	-	no_errors	KRTAP10-6	HGNC	ENSG00000188155	tier1	-	-	75	0	0.00	56	44	43.56
KSR2	0	genome.wustl.edu	37	12	117977636	117977636	+	Silent	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	117977636	117977636	C	T	SNP	KSR2	ENST00000339824	human	ensembl	74_37	-1	known	silent	c.1575	p.T525	0.850	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	KSR2	HGNC	ENSG00000171435	tier1	-	-	38	0	0.00	14	23	62.16
LINC00969	0	genome.wustl.edu	37	3	195456375	195456375	+	RNA	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	195456375	195456375	C	T	SNP	LINC00969	ENST00000594446	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	LINC00969	HGNC	ENSG00000242086	tier1	rs3762740	-	9	0	0.00	3	4	57.14
LIPH	0	genome.wustl.edu	37	3	185245348	185245348	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	185245348	185245348	G	C	SNP	LIPH	ENST00000296252	human	ensembl	74_37	-1	known	missense	c.552	p.F184L	1.000	pfam_Lipase_N,pirsf_Lipoprotein_lipase_LIPH	pfam_Lipase_N,superfamily_Lipase_LipOase,pirsf_Lipoprotein_lipase_LIPH,prints_Lipase	-	no_errors	LIPH	HGNC	ENSG00000163898	tier1	-	-	85	0	0.00	33	80	70.80
LMX1A	0	genome.wustl.edu	37	1	165322387	165322387	+	Silent	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	165322387	165322387	G	T	SNP	LMX1A	ENST00000294816	human	ensembl	74_37	-1	known	silent	c.189	p.A63	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LMX1A	HGNC	ENSG00000162761	tier1	-	-	67	0	0.00	65	5	7.14
LOC100128239	0	genome.wustl.edu	37	11	133902537	133902537	+	RNA	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	133902537	133902537	G	A	SNP	LOC100128239	ENST00000532706	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.735	-	-	-	no_errors	RP11-713P17.3	Clone_based_vega_gene	ENSG00000204241	tier1	-	-	39	0	0.00	43	19	30.65
LOC100128239	0	genome.wustl.edu	37	11	133902538	133902538	+	RNA	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	133902538	133902538	C	A	SNP	LOC100128239	ENST00000532706	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	RP11-713P17.3	Clone_based_vega_gene	ENSG00000204241	tier1	-	-	39	0	0.00	43	19	30.65
LOC100506606	0	genome.wustl.edu	37	12	29460831	29460831	+	RNA	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	29460831	29460831	C	T	SNP	LOC100506606	ENST00000553105	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-996F15.2	Clone_based_vega_gene	ENSG00000257176	tier1	-	-	58	0	0.00	46	4	8.00
LOC100506606	0	genome.wustl.edu	37	12	29460854	29460854	+	RNA	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	29460854	29460854	C	T	SNP	LOC100506606	ENST00000553105	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-996F15.2	Clone_based_vega_gene	ENSG00000257176	tier1	-	-	43	0	0.00	33	4	10.81
LRBA	0	genome.wustl.edu	37	4	151357951	151357951	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	4	151357951	151357951	A	T	SNP	LRBA	ENST00000357115	human	ensembl	74_37	-1	known	missense	c.6879	p.D2293E	0.940	pfam_BEACH_dom,superfamily_BEACH_dom,pfscan_BEACH_dom	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom	-	no_errors	LRBA	HGNC	ENSG00000198589	tier1	rs138518902	-	52	0	0.00	55	14	20.29
LRP6	0	genome.wustl.edu	37	12	12397568	12397568	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	12397568	12397568	G	A	SNP	LRP6	ENST00000261349	human	ensembl	74_37	-1	known	missense	c.77	p.A26V	1.000	pirsf_Low_density_Lipo_rcpt-rel_p5/6	pirsf_Low_density_Lipo_rcpt-rel_p5/6,pfam_LDLR_classB_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDLR_classB_rpt,smart_EG-like_dom,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt	-	no_errors	LRP6	HGNC	ENSG00000070018	tier1	-	-	56	0	0.00	39	4	9.30
LRRC69	0	genome.wustl.edu	37	8	92145500	92145500	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	8	92145500	92145500	G	T	SNP	LRRC69	ENST00000448384	human	ensembl	74_37	+1	novel	missense	c.546	p.L182F	0.045	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC69	HGNC	ENSG00000214954	tier1	-	-	89	0	0.00	76	4	5.00
MAL	0	genome.wustl.edu	37	2	95691529	95691529	+	RNA	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	95691529	95691529	C	A	SNP	MAL	ENST00000489399	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.386	-	-	-	no_errors	MAL	HGNC	ENSG00000172005	tier1	-	-	16	0	0.00	6	10	62.50
MAP3K8	0	genome.wustl.edu	37	10	30739243	30739243	+	Silent	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	10	30739243	30739243	C	T	SNP	MAP3K8	ENST00000263056	human	ensembl	74_37	+1	known	silent	c.561	p.H187	0.972	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K8	HGNC	ENSG00000107968	tier1	-	-	58	0	0.00	37	10	21.28
MDM2	0	genome.wustl.edu	37	12	69229656	69229656	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	69229656	69229656	G	A	SNP	MDM2	ENST00000462284	human	ensembl	74_37	+1	known	silent	c.732	p.Q244	1.000	superfamily_SWIB_MDM2_domain,pirsf_p53_neg-reg_MDM_2/4	pfam_SWIB_MDM2_domain,pfam_Znf_RanBP2,superfamily_SWIB_MDM2_domain,pirsf_p53_neg-reg_MDM_2/4,pfscan_Znf_RanBP2,pfscan_Znf_RING	-	no_errors	MDM2	HGNC	ENSG00000135679	tier1	-	-	63	0	0.00	54	10	15.62
MED13	0	genome.wustl.edu	37	17	60033165	60033165	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	17	60033165	60033165	C	A	SNP	MED13	ENST00000397786	human	ensembl	74_37	-1	known	missense	c.5658	p.Q1886H	1.000	pfam_Mediator_Med13	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13	HGNC	ENSG00000108510	tier1	-	-	24	0	0.00	22	13	37.14
MIOS	0	genome.wustl.edu	37	7	7628156	7628156	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	7	7628156	7628156	A	G	SNP	MIOS	ENST00000340080	human	ensembl	74_37	+1	known	missense	c.1846	p.R616G	1.000	NULL	smart_WD40_repeat	-	no_errors	MIOS	HGNC	ENSG00000164654	tier1	-	-	64	0	0.00	55	8	12.70
MIR744	0	genome.wustl.edu	37	17	11985275	11985275	+	RNA	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	17	11985275	11985275	C	T	SNP	MIR744	ENST00000578242	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.960	-	-	-	no_errors	MIR744	HGNC	ENSG00000266297	tier1	-	-	51	0	0.00	31	29	48.33
MT-ND5	0	genome.wustl.edu	37	MT	13586	13586	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	MT	13586	13586	C	T	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.1250	p.S417F	NULL	tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1	-	-	10	0	0.00	4	5	55.56
MT-ND6	0	genome.wustl.edu	37	MT	14162	14162	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	MT	14162	14162	G	A	SNP	MT-ND6	ENST00000361681	human	ensembl	74_37	-1	known	missense	c.512	p.A171V	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase_su6	pfam_NADH_UbQ/plastoQ_OxRdtase_su6	-	no_errors	MT-ND6	HGNC	ENSG00000198695	tier1	-	-	33	0	0.00	19	11	36.67
MTMR14	0	genome.wustl.edu	37	3	9739484	9739484	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	9739484	9739484	G	A	SNP	MTMR14	ENST00000296003	human	ensembl	74_37	+1	known	missense	c.1703	p.R568Q	1.000	NULL	NULL	-	no_errors	MTMR14	HGNC	ENSG00000163719	tier1	-	-	50	0	0.00	28	14	33.33
MUC12	0	genome.wustl.edu	37	7	100616293	100616293	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	7	100616293	100616293	G	A	SNP	MUC12	ENST00000379442	human	ensembl	74_37	+1	novel	missense	c.256	p.V86M	0.001	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	rs202012524	-	28	0	0.00	43	8	15.69
MUC16	0	genome.wustl.edu	37	19	9045688	9045688	+	Silent	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	9045688	9045688	T	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.35943	p.T11981	0.080	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	138	0	0.00	116	13	10.08
MUC16	0	genome.wustl.edu	37	19	9090317	9090317	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	9090317	9090317	G	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.1498	p.H500N	0.001	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	52	0	0.00	49	4	7.55
MUC6	0	genome.wustl.edu	37	11	1027330	1027330	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	1027330	1027330	G	A	SNP	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	silent	c.2169	p.C723	0.991	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956				79	0	0.00	75	4	5.06
MYLK	0	genome.wustl.edu	37	3	123452795	123452795	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	123452795	123452795	C	T	SNP	MYLK	ENST00000360304	human	ensembl	74_37	-1	known	missense	c.1048	p.A350T	0.000	NULL	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	MYLK	HGNC	ENSG00000065534	tier1	-	-	44	0	0.00	41	33	44.59
MYO1F	0	genome.wustl.edu	37	19	8587613	8587613	+	Silent	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	8587613	8587613	C	G	SNP	MYO1F	ENST00000338257	human	ensembl	74_37	-1	known	silent	c.2955	p.P985	0.001	NULL	pfam_Myosin_head_motor_dom,pfam_Myosin_tail_2,pfam_SH3_domain,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_SH3_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_SH3_domain,prints_Myosin_head_motor_dom,prints_SH3_domain	-	no_errors	MYO1F	HGNC	ENSG00000142347	tier1	-	-	52	0	0.00	50	21	29.58
MYO7A	0	genome.wustl.edu	37	11	76883843	76883843	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	76883843	76883843	G	A	SNP	MYO7A	ENST00000409709	human	ensembl	74_37	+1	known	missense	c.1847	p.R616Q	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_FERM_N,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7A	HGNC	ENSG00000137474	tier1	-	-	46	0	0.00	55	14	20.29
MYO7B	0	genome.wustl.edu	37	2	128391782	128391782	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	128391782	128391782	G	A	SNP	MYO7B	ENST00000389524	human	ensembl	74_37	+1	known	missense	c.5468	p.R1823Q	0.993	smart_Band_41_domain,pfscan_FERM_domain	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,pfam_SH3_2,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_Band_41_domain,smart_SH3_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,pfscan_SH3_domain,prints_Myosin_head_motor_dom	-	no_errors	MYO7B	HGNC	ENSG00000169994	tier1	-	-	61	0	0.00	57	41	41.84
NAA15	0	genome.wustl.edu	37	4	140282928	140282928	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	4	140282928	140282928	G	C	SNP	NAA15	ENST00000296543	human	ensembl	74_37	+1	known	missense	c.1590	p.M530I	1.000	pirsf_NatA_aux_su	pfam_NatA_aux_su,smart_TPR_repeat,pirsf_NatA_aux_su,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NAA15	HGNC	ENSG00000164134	tier1	-	-	69	0	0.00	59	34	36.56
NBEAL2	0	genome.wustl.edu	37	3	47044496	47044496	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	47044496	47044496	C	T	SNP	NBEAL2	ENST00000450053	human	ensembl	74_37	+1	known	missense	c.5509	p.R1837C	0.990	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL2	HGNC	ENSG00000160796	tier1	-	-	26	0	0.00	12	3	20.00
NCOA7	0	genome.wustl.edu	37	6	126210540	126210540	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	126210540	126210540	G	A	SNP	NCOA7	ENST00000368357	human	ensembl	74_37	+1	known	missense	c.1340	p.R447Q	0.000	NULL	pfam_TLDc,pfam_LysM_dom,pfam_GRAM,smart_LysM_dom,smart_TLDc	-	no_errors	NCOA7	HGNC	ENSG00000111912				56	0	0.00	58	4	6.45
NCOR1	0	genome.wustl.edu	37	17	16024424	16024424	+	Silent	SNP	A	A	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	17	16024424	16024424	A	T	SNP	NCOR1	ENST00000268712	human	ensembl	74_37	-1	known	silent	c.1794	p.A598	0.999	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR1	HGNC	ENSG00000141027	tier1	-	-	45	0	0.00	16	7	30.43
NFYB	0	genome.wustl.edu	37	12	104519955	104519955	+	Silent	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	104519955	104519955	A	G	SNP	NFYB	ENST00000240055	human	ensembl	74_37	-1	known	silent	c.168	p.D56	0.999	superfamily_Histone-fold	pfam_CBFA_NFYB_domain,pfam_Histone_core_D,superfamily_Histone-fold,prints_Transcrpt_fac_NFYB/HAP3	-	no_errors	NFYB	HGNC	ENSG00000120837	tier1	-	-	61	0	0.00	43	26	37.68
NOC2L	0	genome.wustl.edu	37	1	880079	880079	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	880079	880079	C	T	SNP	NOC2L	ENST00000327044	human	ensembl	74_37	-1	known	missense	c.2245	p.D749N	0.996	NULL	pfam_Noc2,superfamily_ARM-type_fold	-	no_errors	NOC2L	HGNC	ENSG00000188976	tier1	-	-	30	0	0.00	18	4	18.18
NOD1	0	genome.wustl.edu	37	7	30491759	30491759	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	7	30491759	30491759	A	C	SNP	NOD1	ENST00000222823	human	ensembl	74_37	-1	known	missense	c.1274	p.F425C	1.000	pfscan_NACHT_NTPase	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NOD1	HGNC	ENSG00000106100	tier1	-	-	47	0	0.00	8	15	65.22
NOS2	0	genome.wustl.edu	37	17	26091136	26091136	+	Silent	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	17	26091136	26091136	G	T	SNP	NOS2	ENST00000313735	human	ensembl	74_37	-1	known	silent	c.2463	p.P821	1.000	pfam_FAD-binding_1,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_euk	pfam_NO_synthase_oxygenase_dom,pfam_FAD-binding_1,pfam_Flavodoxin/NO_synth,pfam_OxRdtase_FAD/NAD-bd,superfamily_NO_synthase_oxygenase_dom,superfamily_Riboflavin_synthase-like_b-brl,pirsf_NOS_euk,pfscan_Flavodoxin/NO_synth,prints_Flavoprot_Pyr_Nucl_cyt_Rdtase,prints_Flavdoxin	-	no_errors	NOS2	HGNC	ENSG00000007171	tier1	-	-	69	0	0.00	23	40	63.49
NRD1	0	genome.wustl.edu	37	1	52303157	52303157	+	Splice_Site	SNP	A	A	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	52303157	52303157	A	T	SNP	NRD1	ENST00000354831	human	ensembl	74_37	-1	known	splice_site	c.764+2	e3+2	1.000	-	-	-	no_errors	NRD1	HGNC	ENSG00000078618	tier1	-	-	58	0	0.00	53	22	29.33
NRG2	0	genome.wustl.edu	37	5	139422532	139422534	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	5	139422532	139422534	GCT	-	DEL	NRG2	ENST00000545385	human	ensembl	74_37	-1	known	in_frame_del	c.123_121	p.S41in_frame_del	0.905:0.938:0.962	NULL	pfam_Neuregulin_1_C,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_EG-like_dom,pfscan_Ig-like_dom	-	no_errors	NRG2	HGNC	ENSG00000158458	tier1			23	0	0.00	9	3	25.00
NXPH2	0	genome.wustl.edu	37	2	139429033	139429033	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	139429033	139429033	G	T	SNP	NXPH2	ENST00000272641	human	ensembl	74_37	-1	known	missense	c.254	p.A85D	1.000	pfam_NXPH/NXPE,pirsf_Neurexophilin	pfam_NXPH/NXPE,pirsf_Neurexophilin	-	no_errors	NXPH2	HGNC	ENSG00000144227	tier1	-	-	47	0	0.00	56	12	17.65
OAT	0	genome.wustl.edu	37	10	126097428	126097428	+	Silent	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	10	126097428	126097428	C	T	SNP	OAT	ENST00000368845	human	ensembl	74_37	-1	known	silent	c.306	p.K102	0.021	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase,tigrfam_Orn_aminotrans	pfam_Aminotrans_3,superfamily_PyrdxlP-dep_Trfase,tigrfam_Orn_aminotrans	-	no_errors	OAT	HGNC	ENSG00000065154	tier1	-	-	98	0	0.00	52	36	40.45
OR10G8	0	genome.wustl.edu	37	11	123900843	123900843	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	123900843	123900843	T	C	SNP	OR10G8	ENST00000431524	human	ensembl	74_37	+1	known	missense	c.514	p.W172R	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G8	HGNC	ENSG00000234560	tier1	-	-	97	0	0.00	184	14	7.07
OR10G8	0	genome.wustl.edu	37	11	123900856	123900856	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	123900856	123900856	A	G	SNP	OR10G8	ENST00000431524	human	ensembl	74_37	+1	known	missense	c.527	p.Y176C	0.950	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G8	HGNC	ENSG00000234560	tier1	-	-	98	0	0.00	189	13	6.44
OR2W1	0	genome.wustl.edu	37	6	29012660	29012660	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	29012660	29012660	A	T	SNP	OR2W1	ENST00000377175	human	ensembl	74_37	-1	known	missense	c.293	p.I98N	0.022	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2W1	HGNC	ENSG00000204704	tier1	-	-	32	0	0.00	11	14	56.00
OR5B3	0	genome.wustl.edu	37	11	58170145	58170145	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	58170145	58170145	G	A	SNP	OR5B3	ENST00000309403	human	ensembl	74_37	-1	known	silent	c.738	p.V246	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5B3	HGNC	ENSG00000172769				59	0	0.00	57	3	5.00
OR5K4	0	genome.wustl.edu	37	3	98073474	98073474	+	Silent	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	98073474	98073474	T	C	SNP	OR5K4	ENST00000354924	human	ensembl	74_37	+1	known	silent	c.777	p.I259	0.859	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5K4	HGNC	ENSG00000196098	tier1	-	-	88	0	0.00	25	18	41.86
OR8B4	0	genome.wustl.edu	37	11	124294378	124294378	+	Silent	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	124294378	124294378	G	T	SNP	OR8B4	ENST00000356130	human	ensembl	74_37	-1	known	silent	c.390	p.L130	0.843	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR8B4	HGNC	ENSG00000198657	tier1	-	-	33	0	0.00	47	31	39.74
OR8U1	0	genome.wustl.edu	37	11	56143125	56143125	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	56143125	56143125	C	T	SNP	OR8U1	ENST00000302270	human	ensembl	74_37	+1	known	missense	c.26	p.A9V	0.033	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8U1	HGNC	ENSG00000172199				44	0	0.00	35	2	5.41
OTOGL	0	genome.wustl.edu	37	12	80714314	80714314	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	80714314	80714314	G	A	SNP	OTOGL	ENST00000458043	human	ensembl	74_37	+1	known	silent	c.3888	p.R1296	0.109	pfam_AbfB,superfamily_AbfB	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_AbfB,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	OTOGL	HGNC	ENSG00000165899	tier1	-	-	40	0	0.00	44	6	12.00
P2RY10	0	genome.wustl.edu	37	X	78216849	78216849	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	X	78216849	78216849	C	T	SNP	P2RY10	ENST00000171757	human	ensembl	74_37	+1	known	missense	c.832	p.P278S	0.009	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	P2RY10	HGNC	ENSG00000078589	tier1	-	-	9	0	0.00	6	16	72.73
PAPPA2	0	genome.wustl.edu	37	1	176734935	176734935	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	176734935	176734935	C	T	SNP	PAPPA2	ENST00000367662	human	ensembl	74_37	+1	known	missense	c.4285	p.L1429F	0.989	superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP	pfam_Notch_dom,pfam_Sushi_SCR_CCP,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA2	HGNC	ENSG00000116183	tier1	-	-	63	0	0.00	45	4	8.16
PCDHB12	0	genome.wustl.edu	37	5	140588791	140588791	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	5	140588791	140588791	G	A	SNP	PCDHB12	ENST00000239450	human	ensembl	74_37	+1	known	silent	c.312	p.L104	0.002	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB12	HGNC	ENSG00000120328				67	0	0.00	70	4	5.41
PCDHB2	0	genome.wustl.edu	37	5	140475258	140475258	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	5	140475258	140475258	G	T	SNP	PCDHB2	ENST00000194155	human	ensembl	74_37	+1	known	missense	c.884	p.R295L	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB2	HGNC	ENSG00000112852				61	0	0.00	45	3	6.25
PDCD6IP	0	genome.wustl.edu	37	3	33906852	33906852	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	33906852	33906852	C	G	SNP	PDCD6IP	ENST00000457054	human	ensembl	74_37	+1	known	missense	c.2377	p.Q793E	0.007	NULL	pfam_BRO1_dom,pfscan_BRO1_dom	-	no_errors	PDCD6IP	HGNC	ENSG00000170248	tier1	-	-	70	0	0.00	23	31	57.41
PDE4D	0	genome.wustl.edu	37	5	58289273	58289273	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	5	58289273	58289273	C	T	SNP	PDE4D	ENST00000340635	human	ensembl	74_37	-1	known	missense	c.941	p.R314Q	1.000	NULL	pfam_PDEase_catalytic_dom,prints_PDEase	-	no_errors	PDE4D	HGNC	ENSG00000113448	tier1	-	-	65	0	0.00	33	9	21.43
PDE4D	0	genome.wustl.edu	37	5	58511631	58511631	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	5	58511631	58511631	A	G	SNP	PDE4D	ENST00000340635	human	ensembl	74_37	-1	known	missense	c.619	p.S207P	1.000	NULL	pfam_PDEase_catalytic_dom,prints_PDEase	-	no_errors	PDE4D	HGNC	ENSG00000113448	tier1	-	-	57	0	0.00	27	15	35.71
PDE6H	0	genome.wustl.edu	37	12	15134380	15134380	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	15134380	15134380	G	T	SNP	PDE6H	ENST00000266395	human	ensembl	74_37	+1	known	missense	c.222	p.L74F	1.000	pfam_PDE6_gamma,pirsf_PDE6_gamma	pfam_PDE6_gamma,pirsf_PDE6_gamma	-	no_errors	PDE6H	HGNC	ENSG00000139053	tier1	-	-	43	0	0.00	45	4	8.16
PDPR	0	genome.wustl.edu	37	16	70187417	70187417	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	16	70187417	70187417	A	G	SNP	PDPR	ENST00000288050	human	ensembl	74_37	+1	known	missense	c.2176	p.I726V	0.993	pfam_GCV_T_N	pfam_FAD-dep_OxRdtase,pfam_GCV_T_N,pfam_GCV_T_C,pfam_FAD_bind_dom	-	no_errors	PDPR	HGNC	ENSG00000090857	tier1	-	-	111	0	0.00	98	21	17.65
PDZD3	0	genome.wustl.edu	37	11	119056655	119056655	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	119056655	119056655	T	C	SNP	PDZD3	ENST00000355547	human	ensembl	74_37	+1	known	missense	c.38	p.L13S	0.029	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD3	HGNC	ENSG00000172367	tier1	-	-	60	0	0.00	41	53	56.38
PDZRN3	0	genome.wustl.edu	37	3	73433779	73433779	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	73433779	73433779	G	A	SNP	PDZRN3	ENST00000263666	human	ensembl	74_37	-1	known	silent	c.1938	p.F646	1.000	NULL	pfam_PDZ,pfam_Znf_C3HC4_RING-type,superfamily_PDZ,superfamily_TRAF-like,smart_Znf_RING,smart_PDZ,pfscan_PDZ,pfscan_Znf_RING,pfscan_Znf_TRAF	-	no_errors	PDZRN3	HGNC	ENSG00000121440	tier1	-	-	32	0	0.00	10	13	56.52
PEAK1	0	genome.wustl.edu	37	15	77473641	77473641	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	15	77473641	77473641	T	A	SNP	PEAK1	ENST00000312493	human	ensembl	74_37	-1	known	missense	c.628	p.I210F	0.142	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	PEAK1	HGNC	ENSG00000173517	tier1	-	-	43	0	0.00	31	8	20.00
PHF14	0	genome.wustl.edu	37	7	11068417	11068417	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	7	11068417	11068417	G	T	SNP	PHF14	ENST00000403050	human	ensembl	74_37	+1	known	missense	c.1427	p.G476V	1.000	smart_Znf_PHD	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF14	HGNC	ENSG00000106443	tier1	-	-	62	0	0.00	30	16	34.78
PKN1	0	genome.wustl.edu	37	19	14581013	14581013	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	14581013	14581013	A	G	SNP	PKN1	ENST00000342216	human	ensembl	74_37	+1	known	missense	c.2350	p.T784A	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_HR1_rho-bd,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,superfamily_C2_dom,smart_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	PKN1	HGNC	ENSG00000123143	tier1	-	-	59	0	0.00	32	21	39.62
PLEKHA5	0	genome.wustl.edu	37	12	19496362	19496362	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	19496362	19496362	G	T	SNP	PLEKHA5	ENST00000317589	human	ensembl	74_37	+1	known	nonsense	c.2347	p.E783*	0.989	NULL	pfam_Pleckstrin_homology,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_WW_dom	-	no_errors	PLEKHA5	HGNC	ENSG00000052126				64	0	0.00	51	4	7.27
PLEKHM2	0	genome.wustl.edu	37	1	16059221	16059221	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	16059221	16059221	C	G	SNP	PLEKHM2	ENST00000375799	human	ensembl	74_37	+1	known	missense	c.2920	p.Q974E	1.000	NULL	pfam_Run,pfam_Pleckstrin_homology,smart_Run,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Run	-	no_errors	PLEKHM2	HGNC	ENSG00000116786	tier1	-	-	57	0	0.00	36	14	28.00
PLXNA2	0	genome.wustl.edu	37	1	208315682	208315682	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	208315682	208315682	C	T	SNP	PLXNA2	ENST00000367033	human	ensembl	74_37	-1	known	missense	c.1498	p.E500K	1.000	superfamily_Semap_dom,pfscan_Semap_dom	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA2	HGNC	ENSG00000076356	tier1	-	-	86	0	0.00	34	29	46.03
PLXNA3	0	genome.wustl.edu	37	X	153697205	153697205	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	X	153697205	153697205	A	T	SNP	PLXNA3	ENST00000369682	human	ensembl	74_37	+1	known	missense	c.4327	p.I1443F	1.000	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA3	HGNC	ENSG00000130827	tier1	-	-	33	0	0.00	14	32	69.57
PLXND1	0	genome.wustl.edu	37	3	129304794	129304794	+	Splice_Site	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	129304794	129304794	C	G	SNP	PLXND1	ENST00000324093	human	ensembl	74_37	-1	known	splice_site	c.1851+1	e5+1	0.994	-	-	-	no_errors	PLXND1	HGNC	ENSG00000004399	tier1	-	-	116	0	0.00	148	28	15.91
PODN	0	genome.wustl.edu	37	1	53542922	53542922	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	53542922	53542922	C	G	SNP	PODN	ENST00000312553	human	ensembl	74_37	+1	known	missense	c.786	p.N262K	0.850	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	PODN	HGNC	ENSG00000174348	tier1	-	-	39	0	0.00	30	24	44.44
POGK	0	genome.wustl.edu	37	1	166818285	166818285	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	166818285	166818285	G	T	SNP	POGK	ENST00000367875	human	ensembl	74_37	+1	known	missense	c.469	p.D157Y	0.406	NULL	pfam_DDE_SF_endonuclease_CENPB-like,pfam_Brinker_DNA-bd,pfam_HTH_CenpB_DNA-bd_dom,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,superfamily_Homeodomain-like,smart_Krueppel-associated_box,smart_HTH_CenpB_DNA-bd_dom,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	POGK	HGNC	ENSG00000143157				62	0	0.00	51	3	5.56
POM121L12	0	genome.wustl.edu	37	7	53103931	53103931	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	7	53103931	53103931	C	A	SNP	POM121L12	ENST00000408890	human	ensembl	74_37	+1	known	missense	c.567	p.S189R	0.000	NULL	NULL	-	no_errors	POM121L12	HGNC	ENSG00000221900	tier1	-	-	68	0	0.00	65	13	16.67
POTEC	0	genome.wustl.edu	37	18	14542998	14542998	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	18	14542998	14542998	C	A	SNP	POTEC	ENST00000358970	human	ensembl	74_37	-1	known	missense	c.148	p.D50Y	0.003	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	POTEC	HGNC	ENSG00000183206	tier1	-	-	243	0	0.00	217	16	6.87
POU4F3	0	genome.wustl.edu	37	5	145719130	145719130	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	5	145719130	145719130	G	A	SNP	POU4F3	ENST00000230732	human	ensembl	74_37	+1	known	missense	c.140	p.G47E	1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F3	HGNC	ENSG00000091010	tier1	-	-	89	0	0.00	31	44	58.67
PRAMEF1	0	genome.wustl.edu	37	1	12854479	12854479	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	12854479	12854479	C	T	SNP	PRAMEF1	ENST00000332296	human	ensembl	74_37	+1	known	missense	c.703	p.R235C	0.002	NULL	NULL	-	no_errors	PRAMEF1	HGNC	ENSG00000116721	tier1	rs1063775	-	175	0	0.00	110	41	26.97
PRDM9	0	genome.wustl.edu	37	5	23527472	23527472	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	5	23527472	23527472	G	A	SNP	PRDM9	ENST00000296682	human	ensembl	74_37	+1	known	missense	c.2275	p.D759N	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_SSXRD_motif,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	PRDM9	HGNC	ENSG00000164256	tier1	rs112666693	-	142	0	0.00	115	18	13.43
PRTFDC1	0	genome.wustl.edu	37	10	25138797	25138797	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	10	25138797	25138797	G	C	SNP	PRTFDC1	ENST00000320152	human	ensembl	74_37	-1	known	missense	c.654	p.H218Q	0.922	NULL	pfam_PRibTrfase_dom,tigrfam_Hxn_phspho_trans	-	no_errors	PRTFDC1	HGNC	ENSG00000099256	tier1	-	-	35	0	0.00	31	10	24.39
PTPLB	0	genome.wustl.edu	37	3	123301134	123301134	+	Silent	SNP	A	A	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	123301134	123301134	A	T	SNP	PTPLB	ENST00000383657	human	ensembl	74_37	-1	known	silent	c.198	p.A66	0.998	NULL	pfam_Tyr_Pase-like_PTPLA	-	no_errors	PTPLB	HGNC	ENSG00000206527	tier1	-	-	68	0	0.00	105	19	15.32
PTPRQ	0	genome.wustl.edu	37	12	80982205	80982205	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	80982205	80982205	G	T	SNP	PTPRQ	ENST00000266688	human	ensembl	74_37	+1	known	missense	c.4571	p.W1524L	1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRQ	HGNC	ENSG00000139304	tier1	-	-	27	0	0.00	28	7	19.44
PURB	0	genome.wustl.edu	37	7	44924094	44924094	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	7	44924094	44924094	C	A	SNP	PURB	ENST00000395699	human	ensembl	74_37	-1	known	missense	c.854	p.R285L	1.000	NULL	pfam_PUR_DNA_RNA-bd,smart_PUR_DNA_RNA-bd	-	no_errors	PURB	HGNC	ENSG00000146676	tier1	-	-	78	0	0.00	64	23	26.44
REST	0	genome.wustl.edu	37	4	57796960	57796960	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	4	57796960	57796960	C	T	SNP	REST	ENST00000309042	human	ensembl	74_37	+1	known	missense	c.1936	p.P646S	0.015	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	REST	HGNC	ENSG00000084093				48	0	0.00	46	4	8.00
RFK	0	genome.wustl.edu	37	9	79002561	79002561	+	RNA	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	9	79002561	79002561	A	G	SNP	RFK	ENST00000479197	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	RFK	HGNC	ENSG00000135002	tier1	-	-	23	0	0.00	20	4	16.67
RINT1	0	genome.wustl.edu	37	7	105189044	105189044	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	7	105189044	105189044	T	C	SNP	RINT1	ENST00000257700	human	ensembl	74_37	+1	known	missense	c.883	p.S295P	0.998	NULL	pfam_RINT1_TIP1	-	no_errors	RINT1	HGNC	ENSG00000135249	tier1	-	-	52	0	0.00	40	14	25.93
RPS27L	0	genome.wustl.edu	37	15	63448736	63448736	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	15	63448736	63448736	T	C	SNP	RPS27L	ENST00000462430	human	ensembl	74_37	-1	putative	missense	c.39	p.I13M	0.000	NULL	pfam_Ribosomal_S27e,superfamily_Ribosomal_zn-bd	-	no_errors	RPS27L	HGNC	ENSG00000185088	tier1	-	-	65	0	0.00	45	11	19.64
RPUSD4	0	genome.wustl.edu	37	11	126080863	126080863	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	126080863	126080863	T	C	SNP	RPUSD4	ENST00000298317	human	ensembl	74_37	-1	known	missense	c.277	p.K93E	1.000	superfamily_PsdUridine_synth_cat_dom	pfam_PsdUridine_synth_RsuA/RluD,superfamily_PsdUridine_synth_cat_dom	-	no_errors	RPUSD4	HGNC	ENSG00000165526	tier1	-	-	69	0	0.00	89	36	28.80
RRP7A	0	genome.wustl.edu	37	22	42910199	42910199	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	22	42910199	42910199	G	A	SNP	RRP7A	ENST00000323013	human	ensembl	74_37	-1	known	missense	c.670	p.R224W	1.000	NULL	NULL	-	no_errors	RRP7A	HGNC	ENSG00000189306	tier1	rs146958654	-	56	0	0.00	43	9	17.31
RXFP1	0	genome.wustl.edu	37	4	159493861	159493861	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	4	159493861	159493861	G	A	SNP	RXFP1	ENST00000307765	human	ensembl	74_37	+1	known	missense	c.61	p.G21S	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_Leu-rich_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Leu-rich_rpt_typical-subtyp,pfscan_LDrepeatLR_classA_rpt,pfscan_GPCR_Rhodpsn_7TM,prints_Relaxin_rcpt,prints_GPCR_Rhodpsn,prints_Gphrmn_rcpt_fam	-	no_errors	RXFP1	HGNC	ENSG00000171509	tier1	-	-	70	0	0.00	76	28	26.92
RXFP1	0	genome.wustl.edu	37	4	159569710	159569710	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	4	159569710	159569710	G	T	SNP	RXFP1	ENST00000307765	human	ensembl	74_37	+1	known	missense	c.1816	p.V606F	0.951	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_Leu-rich_rpt,pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Leu-rich_rpt_typical-subtyp,pfscan_LDrepeatLR_classA_rpt,pfscan_GPCR_Rhodpsn_7TM,prints_Relaxin_rcpt,prints_GPCR_Rhodpsn,prints_Gphrmn_rcpt_fam	-	no_errors	RXFP1	HGNC	ENSG00000171509	tier1	-	-	43	0	0.00	75	4	5.06
RYK	0	genome.wustl.edu	37	3	133913932	133913932	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	133913932	133913932	T	C	SNP	RYK	ENST00000427044	human	ensembl	74_37	-1	known	missense	c.307	p.I103V	0.970	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	RYK	HGNC	ENSG00000163785	tier1	-	-	43	0	0.00	61	16	20.78
SACS	0	genome.wustl.edu	37	13	23911518	23911518	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	13	23911518	23911518	C	T	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.6497	p.R2166H	1.000	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835	tier1	rs200888451	-	28	0	0.00	13	19	59.38
SATB2-AS1	0	genome.wustl.edu	37	2	200322723	200322723	+	RNA	SNP	A	A	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	200322723	200322723	A	T	SNP	SATB2-AS1	ENST00000441234	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SATB2-AS1	HGNC	ENSG00000225953	tier1	-	-	67	0	0.00	66	7	9.59
SERINC2	0	genome.wustl.edu	37	1	31901872	31901872	+	Silent	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	31901872	31901872	C	G	SNP	SERINC2	ENST00000373710	human	ensembl	74_37	+1	known	silent	c.855	p.L285	0.550	pfam_TMS_TDE	pfam_TMS_TDE	-	no_errors	SERINC2	HGNC	ENSG00000168528	tier1	-	-	72	0	0.00	48	18	27.27
SFXN5	0	genome.wustl.edu	37	2	73215478	73215478	+	Splice_Site	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	73215478	73215478	C	G	SNP	SFXN5	ENST00000272433	human	ensembl	74_37	-1	known	splice_site	c.535-1	e10-1	1.000	-	-	-	no_errors	SFXN5	HGNC	ENSG00000144040	tier1	-	-	31	0	0.00	36	9	20.00
SH3BP1	0	genome.wustl.edu	37	22	38061677	38061677	+	Silent	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	22	38061677	38061677	C	T	SNP	SH3BP1	ENST00000599616	human	ensembl	74_37	+1	known	silent	c.1617	p.P539	0.018	superfamily_HAD-like_dom	pfam_RhoGAP_dom,pfam_BAR_dom,superfamily_Rho_GTPase_activation_prot,superfamily_HAD-like_dom,smart_RhoGAP_dom,pfscan_BAR_dom,pfscan_RhoGAP_dom	-	no_errors	SH3BP1	HGNC	ENSG00000100092	tier1	-	-	74	0	0.00	34	27	44.26
SHPRH	0	genome.wustl.edu	37	6	146243864	146243864	+	Silent	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	146243864	146243864	T	C	SNP	SHPRH	ENST00000367503	human	ensembl	74_37	-1	known	silent	c.3666	p.P1222	0.807	superfamily_P-loop_NTPase	pfam_SNF2_N,pfam_Histone_H1/H5_H15,superfamily_P-loop_NTPase,superfamily_Znf_FYVE_PHD,superfamily_WW_dom,smart_Helicase_ATP-bd,smart_Histone_H1/H5_H15,smart_Znf_PHD,smart_Znf_RING,smart_Helicase_C,pfscan_Znf_RING,pfscan_Helicase_C	-	no_errors	SHPRH	HGNC	ENSG00000146414	tier1	-	-	66	0	0.00	70	16	18.60
SHROOM3	0	genome.wustl.edu	37	4	77661903	77661903	+	Silent	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	4	77661903	77661903	C	G	SNP	SHROOM3	ENST00000296043	human	ensembl	74_37	+1	known	silent	c.2577	p.S859	0.000	NULL	pfam_ASD2,pfam_ASD1,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM3	HGNC	ENSG00000138771	tier1	-	-	48	0	0.00	36	19	34.55
SLC16A1	0	genome.wustl.edu	37	1	113460201	113460201	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	113460201	113460201	C	T	SNP	SLC16A1	ENST00000369626	human	ensembl	74_37	-1	known	missense	c.827	p.G276E	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Monocarb_transpt	-	no_errors	SLC16A1	HGNC	ENSG00000155380	tier1	-	-	56	0	0.00	33	26	44.07
SLC17A9	0	genome.wustl.edu	37	20	61594982	61594982	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	20	61594982	61594982	C	T	SNP	SLC17A9	ENST00000370351	human	ensembl	74_37	+1	known	missense	c.772	p.L258F	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A9	HGNC	ENSG00000101194	tier1	-	-	39	0	0.00	20	16	44.44
SLC22A12	0	genome.wustl.edu	37	11	64368307	64368307	+	Silent	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	64368307	64368307	C	T	SNP	SLC22A12	ENST00000377574	human	ensembl	74_37	+1	known	silent	c.1495	p.L499	0.013	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A12	HGNC	ENSG00000197891	tier1	-	-	47	0	0.00	47	4	7.84
SLC22A25	0	genome.wustl.edu	37	11	62931426	62931426	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	11	62931426	62931426	G	A	SNP	SLC22A25	ENST00000306494	human	ensembl	74_37	-1	known	missense	c.1514	p.A505V	0.021	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A25	HGNC	ENSG00000196600	tier1	-	-	81	0	0.00	37	38	50.67
SLC38A1	0	genome.wustl.edu	37	12	46591568	46591568	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	46591568	46591568	G	C	SNP	SLC38A1	ENST00000398637	human	ensembl	74_37	-1	known	missense	c.1297	p.L433V	1.000	pfam_AA_transpt_TM	pfam_AA_transpt_TM	-	no_errors	SLC38A1	HGNC	ENSG00000111371	tier1	-	-	90	0	0.00	63	19	23.17
SLC7A4	0	genome.wustl.edu	37	22	21384088	21384088	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	22	21384088	21384088	A	G	SNP	SLC7A4	ENST00000382932	human	ensembl	74_37	-1	known	missense	c.1535	p.L512P	0.998	pirsf_AA/rel_permease1	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A4	HGNC	ENSG00000099960	tier1	-	-	78	0	0.00	49	13	20.97
SLC9A9	0	genome.wustl.edu	37	3	143551002	143551002	+	Silent	SNP	A	A	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	143551002	143551002	A	C	SNP	SLC9A9	ENST00000316549	human	ensembl	74_37	-1	known	silent	c.237	p.T79	0.999	pfam_Cation/H_exchanger	pfam_Cation/H_exchanger,prints_Na/H_exchanger_6,prints_NaH_exchanger,tigrfam_NaH_exchanger	-	no_errors	SLC9A9	HGNC	ENSG00000181804	tier1	-	-	47	0	0.00	82	10	10.87
SMC2	0	genome.wustl.edu	37	9	106860801	106860801	+	Silent	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	9	106860801	106860801	C	T	SNP	SMC2	ENST00000286398	human	ensembl	74_37	+1	known	silent	c.393	p.F131	1.000	pfam_RecF/RecN/SMC_N,superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,smart_SMC_hinge	-	no_errors	SMC2	HGNC	ENSG00000136824	tier1	-	-	48	0	0.00	21	36	63.16
SMURF1	0	genome.wustl.edu	37	7	98649881	98649881	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	7	98649881	98649881	G	A	SNP	SMURF1	ENST00000361125	human	ensembl	74_37	-1	known	missense	c.668	p.T223M	0.999	NULL	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	SMURF1	HGNC	ENSG00000198742	tier1	-	-	39	0	0.00	58	16	21.62
SOGA3	0	genome.wustl.edu	37	6	127834136	127834136	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	127834136	127834136	C	A	SNP	SOGA3	ENST00000368268	human	ensembl	74_37	-1	known	missense	c.1385	p.R462I	1.000	NULL	pfam_SOGA	-	no_errors	SOGA3	HGNC	ENSG00000214338	tier1	-	-	57	0	0.00	43	24	35.82
SPATA17	0	genome.wustl.edu	37	1	217842377	217842377	+	Silent	SNP	A	A	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	217842377	217842377	A	T	SNP	SPATA17	ENST00000366933	human	ensembl	74_37	+1	known	silent	c.243	p.V81	1.000	superfamily_P-loop_NTPase	pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS	-	no_errors	SPATA17	HGNC	ENSG00000162814	tier1	-	-	40	0	0.00	62	10	13.89
SPTA1	0	genome.wustl.edu	37	1	158622411	158622411	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	158622411	158622411	C	T	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.3221	p.R1074H	1.000	smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554				23	0	0.00	27	2	6.90
ST18	0	genome.wustl.edu	37	8	53025816	53025816	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	8	53025816	53025816	G	A	SNP	ST18	ENST00000276480	human	ensembl	74_37	-1	known	missense	c.3086	p.P1029L	1.000	NULL	pfam_Myelin_TF,pfam_Znf_C2HC	-	no_errors	ST18	HGNC	ENSG00000147488	tier1	-	-	54	0	0.00	35	31	46.97
TCF20	0	genome.wustl.edu	37	22	42607581	42607581	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	22	42607581	42607581	T	A	SNP	TCF20	ENST00000359486	human	ensembl	74_37	-1	known	missense	c.3731	p.D1244V	1.000	NULL	smart_Znf_PHD	-	no_errors	TCF20	HGNC	ENSG00000100207	tier1	-	-	52	0	0.00	24	23	48.94
TDRD6	0	genome.wustl.edu	37	6	46658264	46658264	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	6	46658264	46658264	C	G	SNP	TDRD6	ENST00000316081	human	ensembl	74_37	+1	known	missense	c.2399	p.T800S	0.000	pfam_Tudor	pfam_Tudor,smart_Tudor,pfscan_Tudor	-	no_errors	TDRD6	HGNC	ENSG00000180113	tier1	-	-	42	0	0.00	30	14	31.82
TECPR2	0	genome.wustl.edu	37	14	102880972	102880972	+	Splice_Site	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	14	102880972	102880972	G	T	SNP	TECPR2	ENST00000359520	human	ensembl	74_37	+1	known	splice_site	c.481-1	e4-1	1.000	-	-	-	no_errors	TECPR2	HGNC	ENSG00000196663				62	0	0.00	41	3	6.82
TESK1	0	genome.wustl.edu	37	9	35609251	35609251	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	9	35609251	35609251	G	A	SNP	TESK1	ENST00000336395	human	ensembl	74_37	+1	known	missense	c.1393	p.E465K	0.275	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	TESK1	HGNC	ENSG00000107140	tier1	-	-	43	0	0.00	44	14	24.14
TLE1	0	genome.wustl.edu	37	9	84249102	84249102	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	9	84249102	84249102	C	T	SNP	TLE1	ENST00000376499	human	ensembl	74_37	-1	known	missense	c.487	p.G163S	1.000	NULL	pfam_Groucho/TLE_N,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Groucho_enhance	-	no_errors	TLE1	HGNC	ENSG00000196781	tier1	rs143365960	-	65	0	0.00	57	4	6.56
TMPO	0	genome.wustl.edu	37	12	98927030	98927030	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	98927030	98927030	G	C	SNP	TMPO	ENST00000266732	human	ensembl	74_37	+1	known	missense	c.995	p.R332T	0.998	NULL	pfam_LAP2alpha,pfam_LEM-like_dom,pfam_LEM_dom,superfamily_LEM/LEM-like_dom,smart_LEM_dom,pfscan_LEM_dom,pfscan_LEM-like_dom	-	no_errors	TMPO	HGNC	ENSG00000120802	tier1	-	-	50	0	0.00	50	14	21.88
TNKS2	0	genome.wustl.edu	37	10	93609336	93609336	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	10	93609336	93609336	A	G	SNP	TNKS2	ENST00000371627	human	ensembl	74_37	+1	known	missense	c.2679	p.I893M	1.000	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_Ankyrin_rpt,pfam_Poly(ADP-ribose)pol_cat_dom,pfam_SAM_2,pfam_SAM_type1,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,pfscan_Poly(ADP-ribose)pol_cat_dom,prints_Ankyrin_rpt	-	no_errors	TNKS2	HGNC	ENSG00000107854	tier1	-	-	36	0	0.00	36	17	32.08
TNNT2	0	genome.wustl.edu	37	1	201336929	201336929	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	201336929	201336929	C	T	SNP	TNNT2	ENST00000458432	human	ensembl	74_37	-1	known	missense	c.175	p.E59K	0.808	NULL	pfam_Troponin	-	no_errors	TNNT2	HGNC	ENSG00000118194	tier1	-	-	72	0	0.00	97	15	13.39
TNS3	0	genome.wustl.edu	37	7	47408054	47408054	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	7	47408054	47408054	G	T	SNP	TNS3	ENST00000311160	human	ensembl	74_37	-1	known	missense	c.2189	p.S730Y	0.026	NULL	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Tyr/Dual-sp_Pase,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS3	HGNC	ENSG00000136205	tier1	-	-	68	0	0.00	70	4	5.41
TP53	0	genome.wustl.edu	37	17	7578179	7578179	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	17	7578179	7578179	C	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	nonsense	c.670	p.E224*	0.990	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	77	0	0.00	26	40	60.61
TPP2	0	genome.wustl.edu	37	13	103266526	103266526	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	13	103266526	103266526	G	A	SNP	TPP2	ENST00000376065	human	ensembl	74_37	+1	known	missense	c.370	p.A124T	1.000	pfam_Peptidase_S8/S53_dom,superfamily_Peptidase_S8/S53_dom	pfam_Peptidase_S8/S53_dom,pfam_Peptidase_S8A_TPPII,superfamily_Peptidase_S8/S53_dom,prints_Peptidase_S8_subtilisin-rel	-	no_errors	TPP2	HGNC	ENSG00000134900	tier1	-	-	49	0	0.00	58	4	6.45
TRIML1	0	genome.wustl.edu	37	4	189063453	189063453	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	4	189063453	189063453	A	T	SNP	TRIML1	ENST00000332517	human	ensembl	74_37	+1	known	missense	c.552	p.K184N	0.997	NULL	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIML1	HGNC	ENSG00000184108				22	0	0.00	46	7	13.21
TRPC4	0	genome.wustl.edu	37	13	38266166	38266166	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	13	38266166	38266166	C	A	SNP	TRPC4	ENST00000379681	human	ensembl	74_37	-1	known	missense	c.1204	p.V402F	1.000	tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC4_channel,prints_TRPC_channel,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	-	no_errors	TRPC4	HGNC	ENSG00000133107	tier1	-	-	48	0	0.00	13	19	59.38
TRPC5	0	genome.wustl.edu	37	X	111155531	111155531	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	X	111155531	111155531	G	A	SNP	TRPC5	ENST00000262839	human	ensembl	74_37	-1	known	silent	c.888	p.Y296	1.000	tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC5_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC5	HGNC	ENSG00000072315	tier1	-	-	22	0	0.00	3	19	86.36
TRPM1	0	genome.wustl.edu	37	15	31352747	31352747	+	Silent	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	15	31352747	31352747	C	A	SNP	TRPM1	ENST00000542188	human	ensembl	74_37	-1	known	silent	c.1314	p.P438	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM1	HGNC	ENSG00000134160	tier1	-	-	63	0	0.00	54	4	6.67
TSPAN15	0	genome.wustl.edu	37	10	71266819	71266819	+	RNA	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	10	71266819	71266819	G	A	SNP	TSPAN15	ENST00000486093	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	TSPAN15	HGNC	ENSG00000099282	tier1	-	-	63	0	0.00	46	13	22.03
TTN	0	genome.wustl.edu	37	2	179463508	179463508	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	179463508	179463508	G	A	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.49225	p.P16409S	1.000	superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				24	0	0.00	38	2	5.00
TXN2	0	genome.wustl.edu	37	22	36877656	36877656	+	RNA	SNP	C	C	G			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	22	36877656	36877656	C	G	SNP	TXN2	ENST00000487725	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	TXN2	HGNC	ENSG00000100348	tier1	-	-	187	0	0.00	120	88	42.31
UGT2B4	0	genome.wustl.edu	37	4	70351133	70351133	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	4	70351133	70351133	G	T	SNP	UGT2B4	ENST00000305107	human	ensembl	74_37	-1	known	missense	c.1103	p.T368N	1.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT2B4	HGNC	ENSG00000156096	tier1	-	-	155	0	0.00	152	11	6.75
UTP14A	0	genome.wustl.edu	37	X	129055622	129055622	+	RNA	DEL	A	A	-			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	X	129055622	129055622	A	-	DEL	UTP14A	ENST00000498179	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	UTP14A	HGNC	ENSG00000156697	tier1			21	0	0.00	13	5	27.78
VN1R2	0	genome.wustl.edu	37	19	53761868	53761868	+	Silent	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	53761868	53761868	C	T	SNP	VN1R2	ENST00000341702	human	ensembl	74_37	+1	known	silent	c.240	p.H80	0.038	NULL	pfam_Vmron_rcpt_1,pfam_GPCR_Rhodpsn,pfam_TAS2_rcpt,pfscan_GPCR_Rhodpsn_7TM,prints_Vmron_rcpt_1	-	no_errors	VN1R2	HGNC	ENSG00000196131				46	0	0.00	73	4	5.19
VRK2	0	genome.wustl.edu	37	2	58276079	58276079	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	2	58276079	58276079	G	A	SNP	VRK2	ENST00000340157	human	ensembl	74_37	+1	known	missense	c.113	p.G38E	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	VRK2	HGNC	ENSG00000028116	tier1	-	-	71	0	0.00	72	55	43.31
VWA2	0	genome.wustl.edu	37	10	116048824	116048824	+	Silent	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	10	116048824	116048824	C	T	SNP	VWA2	ENST00000392982	human	ensembl	74_37	+1	known	silent	c.1698	p.D566	0.363	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_EG-like_dom,pfam_EGF_extracell,smart_VWF_A,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_VWF_A	-	no_errors	VWA2	HGNC	ENSG00000165816	tier1	rs199884277	-	45	0	0.00	44	5	10.00
WDR45B	0	genome.wustl.edu	37	17	80579621	80579621	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	17	80579621	80579621	G	T	SNP	WDR45B	ENST00000392325	human	ensembl	74_37	-1	known	missense	c.482	p.T161K	0.997	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	-	no_errors	WDR45B	HGNC	ENSG00000141580				57	0	0.00	38	2	5.00
WHAMMP3	0	genome.wustl.edu	37	15	23201597	23201597	+	RNA	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	15	23201597	23201597	C	A	SNP	WHAMMP3	ENST00000400153	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	WHAMMP3	HGNC	ENSG00000187667	tier1	-	-	44	0	0.00	29	18	38.30
YIPF2	0	genome.wustl.edu	37	19	11034281	11034281	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	11034281	11034281	C	T	SNP	YIPF2	ENST00000253031	human	ensembl	74_37	-1	known	missense	c.724	p.G242R	0.849	pfam_Yip1	pfam_Yip1	-	no_errors	YIPF2	HGNC	ENSG00000130733	tier1	-	-	79	0	0.00	64	8	11.11
ZBTB39	0	genome.wustl.edu	37	12	57397269	57397269	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	12	57397269	57397269	T	C	SNP	ZBTB39	ENST00000300101	human	ensembl	74_37	-1	known	missense	c.1433	p.K478R	1.000	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB39	HGNC	ENSG00000166860	tier1	-	-	52	0	0.00	28	16	36.36
ZIC4	0	genome.wustl.edu	37	3	147120593	147120593	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	3	147120593	147120593	T	C	SNP	ZIC4	ENST00000525172	human	ensembl	74_37	-1	known	missense	c.142	p.S48G	0.997	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC4	HGNC	ENSG00000174963	tier1	-	-	79	0	0.00	159	10	5.92
ZNF100	0	genome.wustl.edu	37	19	21909627	21909627	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	21909627	21909627	C	T	SNP	ZNF100	ENST00000358296	human	ensembl	74_37	-1	known	missense	c.1487	p.R496Q	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF100	HGNC	ENSG00000197020	tier1	-	-	63	0	0.00	82	6	6.82
ZNF37A	0	genome.wustl.edu	37	10	38406851	38406851	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	10	38406851	38406851	C	A	SNP	ZNF37A	ENST00000351773	human	ensembl	74_37	+1	known	missense	c.772	p.L258I	0.002	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF37A	HGNC	ENSG00000075407	tier1	-	-	66	0	0.00	63	4	5.97
ZNF433	0	genome.wustl.edu	37	19	12127157	12127157	+	Silent	SNP	G	G	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	12127157	12127157	G	A	SNP	ZNF433	ENST00000344980	human	ensembl	74_37	-1	known	silent	c.525	p.C175	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF433	HGNC	ENSG00000197647	tier1	-	-	67	0	0.00	46	18	28.12
ZNF496	0	genome.wustl.edu	37	1	247464330	247464330	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	247464330	247464330	C	T	SNP	ZNF496	ENST00000366498	human	ensembl	74_37	-1	known	missense	c.1363	p.V455I	0.907	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF496	HGNC	ENSG00000162714	tier1	-	-	61	0	0.00	56	4	6.67
ZNF563	0	genome.wustl.edu	37	19	12430312	12430312	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	12430312	12430312	T	A	SNP	ZNF563	ENST00000293725	human	ensembl	74_37	-1	known	missense	c.527	p.K176I	0.987	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF563	HGNC	ENSG00000188868	tier1	-	-	110	0	0.00	73	38	34.23
ZNF665	0	genome.wustl.edu	37	19	53669199	53669199	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	53669199	53669199	C	T	SNP	ZNF665	ENST00000396424	human	ensembl	74_37	-1	known	missense	c.544	p.E182K	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF665	HGNC	ENSG00000197497	tier1	-	-	53	0	0.00	52	18	25.71
ZNF678	0	genome.wustl.edu	37	1	227843492	227843492	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	1	227843492	227843492	A	C	SNP	ZNF678	ENST00000397097	human	ensembl	74_37	+1	known	missense	c.1706	p.E569A	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF678	HGNC	ENSG00000181450	tier1	-	-	97	0	0.00	91	24	20.87
ZNF837	0	genome.wustl.edu	37	19	58879599	58879599	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	58879599	58879599	G	C	SNP	ZNF837	ENST00000427624	human	ensembl	74_37	-1	known	missense	c.1101	p.D367E	0.275	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF837	HGNC	ENSG00000152475				12	0	0.00	12	10	45.45
ZNF850	0	genome.wustl.edu	37	19	37239777	37239777	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A7HY-01A-12D-A351-09	TCGA-LN-A7HY-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	ee35a606-caef-43b3-b7cd-bec8956caa5b	b0fc6d5a-b49d-4fd3-991c-0f18e31c3420	19	37239777	37239777	T	A	SNP	ZNF850	ENST00000591344	human	ensembl	74_37	-1	known	missense	c.2165	p.N722I	0.020	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF850	HGNC	ENSG00000267041	tier1	-	-	147	0	0.00	212	13	5.78
