Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ACACB	0	genome.wustl.edu	37	12	109670566	109670566	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	12	109670566	109670566	G	A	SNP	ACACB	ENST00000338432	human	ensembl	74_37	+1	known	missense	c.4094	p.R1365H	1.000	pfam_AcCoA_COase_cen	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACB	HGNC	ENSG00000076555	tier1	-	-	41	0	0.00	53	11	16.92
ADAMTS20	0	genome.wustl.edu	37	12	43833503	43833503	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	12	43833503	43833503	T	C	SNP	ADAMTS20	ENST00000389420	human	ensembl	74_37	-1	known	missense	c.2515	p.I839V	1.000	pfam_ADAM_spacer1	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS20	HGNC	ENSG00000173157	tier1	-	-	28	0	0.00	26	17	39.53
ANKDD1A	0	genome.wustl.edu	37	15	65218355	65218355	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	15	65218355	65218355	G	C	SNP	ANKDD1A	ENST00000380230	human	ensembl	74_37	+1	known	missense	c.457	p.D153H	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,prints_Ankyrin_rpt	-	no_errors	ANKDD1A	HGNC	ENSG00000166839	tier1	-	-	69	0	0.00	52	19	26.76
ARHGEF1	0	genome.wustl.edu	37	19	42411345	42411345	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	19	42411345	42411345	G	T	SNP	ARHGEF1	ENST00000378152	human	ensembl	74_37	+1	putative	missense	c.2627	p.G876V	0.812	NULL	pfam_RGS-like_dom,pfam_DH-domain,superfamily_DH-domain,superfamily_Regulat_G_prot_signal_superfam,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF1	HGNC	ENSG00000076928	tier1	-	-	91	0	0.00	39	33	45.83
ARL6IP4	0	genome.wustl.edu	37	12	123466293	123466295	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	12	123466293	123466295	GAA	-	DEL	ARL6IP4	ENST00000315580	human	ensembl	74_37	+1	known	in_frame_del	c.705_707	p.K239in_frame_del	0.997:1.000:0.999	pfam_Nucl_RNA-splicing_assoc_SR-25	pfam_Nucl_RNA-splicing_assoc_SR-25	-	no_errors	ARL6IP4	HGNC	ENSG00000182196	tier1			21	0	0.00	21	3	12.50
ASAP3	0	genome.wustl.edu	37	1	23769086	23769086	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	1	23769086	23769086	G	A	SNP	ASAP3	ENST00000336689	human	ensembl	74_37	-1	known	missense	c.493	p.R165C	0.999	NULL	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	ASAP3	HGNC	ENSG00000088280				39	0	0.00	49	3	5.77
ATP10D	0	genome.wustl.edu	37	4	47560156	47560156	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	4	47560156	47560156	T	G	SNP	ATP10D	ENST00000273859	human	ensembl	74_37	+1	known	missense	c.2300	p.L767R	0.996	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10D	HGNC	ENSG00000145246	tier1	-	-	37	0	0.00	37	29	43.94
ATRNL1	0	genome.wustl.edu	37	10	116931078	116931078	+	RNA	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	10	116931078	116931078	T	C	SNP	ATRNL1	ENST00000485327	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ATRNL1	HGNC	ENSG00000107518	tier1	-	-	27	0	0.00	38	7	15.56
BHLHE40	0	genome.wustl.edu	37	3	5025110	5025110	+	Silent	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	3	5025110	5025110	C	T	SNP	BHLHE40	ENST00000256495	human	ensembl	74_37	+1	known	silent	c.972	p.P324	1.000	NULL	pfam_bHLH_dom,pfam_Orange,superfamily_bHLH_dom,smart_bHLH_dom,smart_Orange_subgr,pfscan_Orange,pfscan_bHLH_dom	-	no_errors	BHLHE40	HGNC	ENSG00000134107				57	0	0.00	53	3	5.36
BPTF	0	genome.wustl.edu	37	17	65955782	65955783	+	In_Frame_Ins	INS	-	-	GCC			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	17	65955782	65955783	-	GCC	INS	BPTF	ENST00000321892	human	ensembl	74_37	+1	known	in_frame_ins	c.8430_8431	p.2810in_frame_insA	0.069:0.577	superfamily_Bromodomain	pfam_Bromodomain,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BPTF	HGNC	ENSG00000171634	tier1			30	0	0.00	37	5	11.90
CAMKK1	0	genome.wustl.edu	37	17	3786462	3786462	+	Silent	SNP	A	A	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	17	3786462	3786462	A	G	SNP	CAMKK1	ENST00000381771	human	ensembl	74_37	-1	known	silent	c.522	p.P174	1.000	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CAMKK1	HGNC	ENSG00000004660	tier1	-	-	39	0	0.00	45	4	8.16
CC2D1A	0	genome.wustl.edu	37	19	14034533	14034533	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	19	14034533	14034533	A	C	SNP	CC2D1A	ENST00000318003	human	ensembl	74_37	+1	known	missense	c.1849	p.K617Q	1.000	NULL	pfam_C2_dom,superfamily_C2_dom,smart_DM14,smart_C2_dom	-	no_errors	CC2D1A	HGNC	ENSG00000132024	tier1	-	-	40	0	0.00	27	31	53.45
CCDC18	0	genome.wustl.edu	37	1	93722013	93722013	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	1	93722013	93722013	G	A	SNP	CCDC18	ENST00000557479	human	ensembl	74_37	+1	known	missense	c.3818	p.R1273H	0.962	NULL	superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	CCDC18	HGNC	ENSG00000122483	tier1	-	-	50	0	0.00	51	4	7.27
CDK5RAP2	0	genome.wustl.edu	37	9	123199725	123199725	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	9	123199725	123199725	A	G	SNP	CDK5RAP2	ENST00000349780	human	ensembl	74_37	-1	known	missense	c.3803	p.V1268A	1.000	NULL	pfam_Spindle_assoc	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861	tier1	-	-	81	0	0.00	133	21	13.64
CHADL	0	genome.wustl.edu	37	22	41631181	41631181	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	22	41631181	41631181	G	T	SNP	CHADL	ENST00000216241	human	ensembl	74_37	-1	known	missense	c.2230	p.P744T	0.000	NULL	pfam_Leu-rich_rpt,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	CHADL	HGNC	ENSG00000100399	tier1	-	-	46	0	0.00	68	7	9.33
CNDP2	0	genome.wustl.edu	37	18	72183588	72183588	+	Silent	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	18	72183588	72183588	G	A	SNP	CNDP2	ENST00000324262	human	ensembl	74_37	+1	known	silent	c.1029	p.R343	0.017	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	pfam_Peptidase_M20,pfam_Peptidase_M20_dimer,superfamily_Peptidase_M20_dimer,pirsf_GSH_degradosome_DUG1	-	no_errors	CNDP2	HGNC	ENSG00000133313	tier1	-	-	58	0	0.00	36	4	10.00
COL20A1	0	genome.wustl.edu	37	20	61947988	61947988	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	20	61947988	61947988	G	T	SNP	COL20A1	ENST00000326996	human	ensembl	74_37	+1	known	missense	c.2608	p.G870C	0.015	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL20A1	HGNC	ENSG00000101203	tier1	-	-	85	0	0.00	52	26	33.33
CTAGE9	0	genome.wustl.edu	37	6	132031717	132031717	+	Silent	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	6	132031717	132031717	G	T	SNP	CTAGE9	ENST00000314099	human	ensembl	74_37	-1	known	silent	c.441	p.L147	0.007	NULL	NULL	-	no_errors	CTAGE9	HGNC	ENSG00000236761	tier1	-	-	127	0	0.00	85	29	25.44
CTGF	0	genome.wustl.edu	37	6	132271549	132271549	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	6	132271549	132271549	G	T	SNP	CTGF	ENST00000367976	human	ensembl	74_37	-1	known	missense	c.424	p.R142S	0.945	pfam_VWF_C,smart_VWF_C,pirsf_IGFBP_CNN,pfscan_VWF_C	pfam_Cys_knot,pfam_IGFBP-like,pfam_VWF_C,pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_IGFBP-like,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_Cys_knot_C,pirsf_IGFBP_CNN,pfscan_Cys_knot_C,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	CTGF	HGNC	ENSG00000118523	tier1	-	-	40	0	0.00	13	17	56.67
CYP11A1	0	genome.wustl.edu	37	15	74653949	74653949	+	RNA	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	15	74653949	74653949	G	A	SNP	CYP11A1	ENST00000467407	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.938	-	-	-	no_errors	CYP11A1	HGNC	ENSG00000140459	tier1	-	-	40	0	0.00	63	4	5.97
DAZAP2	0	genome.wustl.edu	37	12	51634874	51634874	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	12	51634874	51634874	G	A	SNP	DAZAP2	ENST00000412716	human	ensembl	74_37	+1	known	missense	c.352	p.A118T	1.000	pfam_DAZ_assoc-2	pfam_DAZ_assoc-2	-	no_errors	DAZAP2	HGNC	ENSG00000183283	tier1	-	-	76	0	0.00	94	17	15.32
DCAF4L1	0	genome.wustl.edu	37	4	41984513	41984513	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	4	41984513	41984513	C	T	SNP	DCAF4L1	ENST00000333141	human	ensembl	74_37	+1	known	missense	c.704	p.T235M	0.151	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF4L1	HGNC	ENSG00000182308				35	0	0.00	30	2	6.25
DDHD1	0	genome.wustl.edu	37	14	53570521	53570521	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	14	53570521	53570521	G	A	SNP	DDHD1	ENST00000323669	human	ensembl	74_37	-1	known	nonsense	c.892	p.Q298*	1.000	NULL	pfam_DDHD,pfscan_DDHD	-	no_errors	DDHD1	HGNC	ENSG00000100523				72	0	0.00	102	6	5.56
DNAH6	0	genome.wustl.edu	37	2	84775508	84775508	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	2	84775508	84775508	C	T	SNP	DNAH6	ENST00000237449	human	ensembl	74_37	+1	known	missense	c.1283	p.A428V	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH6	HGNC	ENSG00000115423	tier1	-	-	37	0	0.00	48	4	7.69
DOT1L	0	genome.wustl.edu	37	19	2213592	2213592	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	19	2213592	2213592	G	A	SNP	DOT1L	ENST00000398665	human	ensembl	74_37	+1	known	missense	c.1612	p.A538T	1.000	pirsf_Histone_H3-K79_MeTrfase_met	pfam_DOT1,pirsf_Histone_H3-K79_MeTrfase_met	-	no_errors	DOT1L	HGNC	ENSG00000104885	tier1	-	-	47	0	0.00	26	32	55.17
DRD2	0	genome.wustl.edu	37	11	113295289	113295289	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	11	113295289	113295289	C	T	SNP	DRD2	ENST00000355319	human	ensembl	74_37	-1	known	missense	c.85	p.A29T	0.000	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Dopamine_D2_rcpt,prints_GPCR_Rhodpsn,prints_Dopamine_rcpt	-	no_errors	DRD2	HGNC	ENSG00000149295	tier1	-	-	57	0	0.00	50	4	7.41
DSCAM	0	genome.wustl.edu	37	21	41414321	41414321	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	21	41414321	41414321	G	A	SNP	DSCAM	ENST00000400454	human	ensembl	74_37	-1	known	missense	c.5663	p.A1888V	1.000	NULL	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub2,smart_Ig_sub,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAM	HGNC	ENSG00000171587	tier1	-	-	37	0	0.00	13	24	64.86
EDDM3B	0	genome.wustl.edu	37	14	21238744	21238744	+	Silent	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	14	21238744	21238744	C	T	SNP	EDDM3B	ENST00000326783	human	ensembl	74_37	+1	known	silent	c.435	p.I145	0.001	NULL	pfam_RNaseA_domain,superfamily_RNaseA_domain,smart_RNaseA_domain	-	no_errors	EDDM3B	HGNC	ENSG00000181552				25	0	0.00	53	5	8.62
ENSG00000201885	0	genome.wustl.edu	37	7	76642996	76642996	+	RNA	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	7	76642996	76642996	T	C	SNP	ENSG00000201885	ENST00000365015	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.004	-	-	-	no_errors	Y_RNA	RFAM	ENSG00000201885	tier1	-	-	22	0	0.00	24	6	20.00
ENSG00000201885	0	genome.wustl.edu	37	7	76642997	76642997	+	RNA	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	7	76642997	76642997	G	A	SNP	ENSG00000201885	ENST00000365015	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.003	-	-	-	no_errors	Y_RNA	RFAM	ENSG00000201885	tier1	-	-	23	0	0.00	23	6	20.00
ENSG00000228302	0	genome.wustl.edu	37	10	12288997	12288997	+	RNA	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	10	12288997	12288997	C	T	SNP	ENSG00000228302	ENST00000421657	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP11-186N15.3	Clone_based_vega_gene	ENSG00000228302	tier1	rs111957661	-	25	0	0.00	24	4	14.29
ENSG00000228302	0	genome.wustl.edu	37	10	12289002	12289002	+	RNA	SNP	T	T	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	10	12289002	12289002	T	G	SNP	ENSG00000228302	ENST00000421657	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	RP11-186N15.3	Clone_based_vega_gene	ENSG00000228302	tier1	rs113024795	-	28	0	0.00	24	4	14.29
ENSG00000232274	0	genome.wustl.edu	37	1	143207775	143207775	+	RNA	SNP	C	C	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	1	143207775	143207775	C	G	SNP	ENSG00000232274	ENST00000412204	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.613	-	-	-	no_errors	RP11-782C8.2	Clone_based_vega_gene	ENSG00000232274	tier1	-	-	141	0	0.00	155	11	6.63
ENSG00000254840	0	genome.wustl.edu	37	11	50274618	50274618	+	RNA	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	11	50274618	50274618	G	T	SNP	ENSG00000254840	ENST00000528459	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.990	-	-	-	no_errors	RP11-574M7.1	Clone_based_vega_gene	ENSG00000254840	tier1	-	-	44	0	0.00	19	5	20.83
EXO1	0	genome.wustl.edu	37	1	242015637	242015637	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	1	242015637	242015637	C	A	SNP	EXO1	ENST00000348581	human	ensembl	74_37	+1	known	missense	c.205	p.H69N	1.000	pfam_XPG_DNA_repair_N,smart_XPG_DNA_repair_N	pfam_XPG-I_dom,pfam_XPG_DNA_repair_N,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG-I_dom,smart_HhH2,prints_XPG/Rad2	-	no_errors	EXO1	HGNC	ENSG00000174371	tier1	-	-	32	0	0.00	54	19	26.03
F5	0	genome.wustl.edu	37	1	169513654	169513654	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	1	169513654	169513654	T	G	SNP	F5	ENST00000367797	human	ensembl	74_37	-1	known	missense	c.1855	p.N619H	1.000	superfamily_Cupredoxin	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F5	HGNC	ENSG00000198734	tier1	-	-	43	0	0.00	44	9	16.67
FAM230B	0	genome.wustl.edu	37	22	21538275	21538275	+	RNA	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	22	21538275	21538275	C	T	SNP	FAM230B	ENST00000451257	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM230B	HGNC	ENSG00000215498				39	0	0.00	37	4	9.76
FBXL4	0	genome.wustl.edu	37	6	99322298	99322298	+	Silent	SNP	C	C	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	6	99322298	99322298	C	G	SNP	FBXL4	ENST00000229971	human	ensembl	74_37	-1	known	silent	c.1722	p.P574	0.002	smart_Leu-rich_rpt_Cys-con_subtyp	pfam_F-box_dom,superfamily_F-box_dom,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom	-	no_errors	FBXL4	HGNC	ENSG00000112234	tier1	-	-	12	0	0.00	16	7	30.43
FBXO34	0	genome.wustl.edu	37	14	55819192	55819192	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	14	55819192	55819192	A	T	SNP	FBXO34	ENST00000313833	human	ensembl	74_37	+1	known	missense	c.2084	p.N695I	0.944	NULL	superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO34	HGNC	ENSG00000178974	tier1	-	-	45	0	0.00	44	21	32.31
FLG	0	genome.wustl.edu	37	1	152276849	152276849	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	1	152276849	152276849	G	A	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.10513	p.H3505Y	0.000	pfam_Filaggrin	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	104	0	0.00	93	58	38.41
FNDC1	0	genome.wustl.edu	37	6	159653096	159653096	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	6	159653096	159653096	G	-	DEL	FNDC1	ENST00000297267	human	ensembl	74_37	+1	known	frame_shift_del	c.1552	p.A519fs	0.005	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC1	HGNC	ENSG00000164694	tier1			56	0	0.00	22	31	58.49
FOXF1	0	genome.wustl.edu	37	16	86544572	86544572	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	16	86544572	86544572	G	A	SNP	FOXF1	ENST00000262426	human	ensembl	74_37	+1	known	missense	c.397	p.E133K	1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXF1	HGNC	ENSG00000103241	tier1	-	-	85	0	0.00	21	60	74.07
FSCB	0	genome.wustl.edu	37	14	44974261	44974261	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	14	44974261	44974261	C	A	SNP	FSCB	ENST00000340446	human	ensembl	74_37	-1	known	missense	c.1930	p.A644S	0.000	NULL	NULL	-	no_errors	FSCB	HGNC	ENSG00000189139				26	0	0.00	60	4	6.25
GOLGA6L2	0	genome.wustl.edu	37	15	23685343	23685343	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	15	23685343	23685343	T	C	SNP	GOLGA6L2	ENST00000567107	human	ensembl	74_37	-1	putative	missense	c.2279	p.E760G	0.000	NULL	NULL	-	no_errors	GOLGA6L2	HGNC	ENSG00000174450	tier1	rs74203443	-	46	0	0.00	37	9	19.57
GOLGA8DP	0	genome.wustl.edu	37	15	22709152	22709152	+	RNA	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	15	22709152	22709152	G	T	SNP	GOLGA8DP	ENST00000314246	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.154	-	-	-	no_errors	GOLGA8DP	HGNC	ENSG00000185182				141	0	0.00	146	8	5.06
GPR63	0	genome.wustl.edu	37	6	97247193	97247193	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	6	97247193	97247193	G	T	SNP	GPR63	ENST00000229955	human	ensembl	74_37	-1	known	missense	c.415	p.L139M	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR63	HGNC	ENSG00000112218				44	0	0.00	59	4	6.35
GPS2	0	genome.wustl.edu	37	17	7216753	7216753	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	17	7216753	7216753	G	T	SNP	GPS2	ENST00000380728	human	ensembl	74_37	-1	known	missense	c.670	p.Q224K	0.999	NULL	NULL	-	no_errors	GPS2	HGNC	ENSG00000132522				47	0	0.00	54	3	5.26
GRM6	0	genome.wustl.edu	37	5	178413399	178413399	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	5	178413399	178413399	G	T	SNP	GRM6	ENST00000231188	human	ensembl	74_37	-1	known	nonsense	c.1856	p.S619*	0.997	pfam_GPCR_3_C,pfscan_GPCR_3_C,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_6,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM6	HGNC	ENSG00000113262				39	0	0.00	34	2	5.56
GTF2IRD2P1	0	genome.wustl.edu	37	7	72664015	72664016	+	RNA	INS	-	-	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	7	72664015	72664016	-	G	INS	GTF2IRD2P1	ENST00000425256	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.912:0.964	-	-	-	no_errors	GTF2IRD2P1	HGNC	ENSG00000214544	tier1			11	0	0.00	18	4	18.18
HIF1A	0	genome.wustl.edu	37	14	62188256	62188256	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	14	62188256	62188256	G	A	SNP	HIF1A	ENST00000539097	human	ensembl	74_37	+1	known	missense	c.328	p.A110T	0.520	NULL	pfam_PAS_fold_3,pfam_HIF-1_TAD_C,pfam_HIF_alpha_subunit,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_HIF-1_alpha,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	HIF1A	HGNC	ENSG00000100644	tier1	-	-	48	0	0.00	96	7	6.80
HM13	0	genome.wustl.edu	37	20	30142485	30142485	+	RNA	DEL	A	A	-			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	20	30142485	30142485	A	-	DEL	HM13	ENST00000474466	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.172	-	-	-	no_errors	HM13	HGNC	ENSG00000101294	tier1			35	0	0.00	25	5	16.67
HMGB1P5	0	genome.wustl.edu	37	3	22424366	22424366	+	RNA	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	3	22424366	22424366	G	T	SNP	HMGB1P5	ENST00000451497	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HMGB1P5	HGNC	ENSG00000132967				29	0	0.00	28	3	9.68
IL9R	0	genome.wustl.edu	37	X	155239804	155239804	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	X	155239804	155239804	C	G	SNP	IL9R	ENST00000244174	human	ensembl	74_37	+1	known	missense	c.1296	p.S432R	0.005	NULL	superfamily_Fibronectin_type3	-	no_errors	IL9R	HGNC	ENSG00000124334	tier1	-	-	100	0	0.00	74	5	6.33
INTS6	0	genome.wustl.edu	37	13	51948408	51948408	+	Silent	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	13	51948408	51948408	T	C	SNP	INTS6	ENST00000311234	human	ensembl	74_37	-1	known	silent	c.2040	p.K680	1.000	NULL	pfam_VWF_A,pfscan_VWF_A	-	no_errors	INTS6	HGNC	ENSG00000102786				52	0	0.00	34	3	7.69
IQSEC1	0	genome.wustl.edu	37	3	12966156	12966156	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	3	12966156	12966156	C	T	SNP	IQSEC1	ENST00000273221	human	ensembl	74_37	-1	known	missense	c.1697	p.R566H	1.000	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,pfscan_Sec7_dom	pfam_Sec7_dom,superfamily_Sec7_dom,smart_Sec7_dom,smart_Pleckstrin_homology,pfscan_IQ_motif_EF-hand-BS,pfscan_Sec7_dom	-	no_errors	IQSEC1	HGNC	ENSG00000144711	tier1	-	-	75	0	0.00	21	52	71.23
ITGB4	0	genome.wustl.edu	37	17	73723864	73723864	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	17	73723864	73723864	T	C	SNP	ITGB4	ENST00000200181	human	ensembl	74_37	+1	known	missense	c.397	p.Y133H	1.000	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,smart_Integrin_bsu_N,prints_Integrin_bsu	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,pfam_Fibronectin_type3,pfam_Calx_beta,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Fibronectin_type3,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,smart_Calx_beta,smart_Fibronectin_type3,prints_Integrin_bsu,pfscan_Fibronectin_type3	-	no_errors	ITGB4	HGNC	ENSG00000132470	tier1	-	-	75	0	0.00	61	5	7.58
KCTD19	0	genome.wustl.edu	37	16	67324844	67324844	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	16	67324844	67324844	T	C	SNP	KCTD19	ENST00000304372	human	ensembl	74_37	-1	known	missense	c.2611	p.I871V	0.997	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold	-	no_errors	KCTD19	HGNC	ENSG00000168676	tier1	-	-	27	0	0.00	41	7	14.29
KIAA1239	0	genome.wustl.edu	37	4	37447948	37447948	+	Silent	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	4	37447948	37447948	C	T	SNP	KIAA1239	ENST00000309447	human	ensembl	74_37	+1	known	silent	c.4338	p.S1446	0.210	superfamily_WD40_repeat_dom	superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	KIAA1239	HGNC	ENSG00000174145	tier1	-	-	41	0	0.00	34	6	15.00
KIAA1731	0	genome.wustl.edu	37	11	93463064	93463064	+	Silent	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	11	93463064	93463064	G	A	SNP	KIAA1731	ENST00000411936	human	ensembl	74_37	+1	known	silent	c.7599	p.V2533	0.000	NULL	NULL	-	no_errors	KIAA1731	HGNC	ENSG00000166004	tier1	-	-	50	0	0.00	68	19	21.84
KMT2C	0	genome.wustl.edu	37	7	151947037	151947037	+	Silent	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	7	151947037	151947037	C	T	SNP	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	silent	c.1737	p.A579	0.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609	tier1	-	-	66	0	0.00	59	21	26.25
KMT2D	0	genome.wustl.edu	37	12	49435700	49435700	+	Silent	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	12	49435700	49435700	C	T	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	silent	c.6183	p.L2061	1.000	superfamily_HMG_box_dom,smart_HMG_box_dom	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1	-	-	56	0	0.00	28	23	44.23
LHFPL5	0	genome.wustl.edu	37	6	35773672	35773672	+	Silent	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	6	35773672	35773672	C	T	SNP	LHFPL5	ENST00000360215	human	ensembl	74_37	+1	known	silent	c.225	p.S75	0.005	pfam_Lipome_HGMIC_fus_partner-like	pfam_Lipome_HGMIC_fus_partner-like	-	no_errors	LHFPL5	HGNC	ENSG00000197753	tier1	-	-	39	0	0.00	19	6	24.00
LINC00152	0	genome.wustl.edu	37	2	87755162	87755162	+	RNA	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	2	87755162	87755162	T	C	SNP	LINC00152	ENST00000331944	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LINC00152	HGNC	ENSG00000222041				44	0	0.00	25	3	10.71
LINC00969	0	genome.wustl.edu	37	3	195400728	195400728	+	RNA	SNP	A	A	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	3	195400728	195400728	A	G	SNP	LINC00969	ENST00000414625	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	LINC00969	HGNC	ENSG00000242086				98	0	0.00	219	22	9.13
LOC100294362	0	genome.wustl.edu	37	17	78354811	78354811	+	RNA	SNP	A	A	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	17	78354811	78354811	A	G	SNP	LOC100294362	ENST00000573394	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2047H16.4	Clone_based_vega_gene	ENSG00000263069	tier1	-	-	72	0	0.00	22	60	73.17
LOC101927188	0	genome.wustl.edu	37	18	6956262	6956263	+	RNA	INS	-	-	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	18	6956262	6956263	-	T	INS	LOC101927188	ENST00000584722	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002:0.001	-	-	-	no_errors	RP11-781P6.1	Clone_based_vega_gene	ENSG00000265069	tier1			17	0	0.00	20	5	20.00
LOC101927267	0	genome.wustl.edu	37	12	49690649	49690649	+	RNA	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	12	49690649	49690649	C	T	SNP	LOC101927267	ENST00000553259	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-161H23.9	Clone_based_vega_gene	ENSG00000258334	tier1	-	-	42	0	0.00	21	20	48.78
LOC101929469	0	genome.wustl.edu	37	12	2964422	2964422	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	12	2964422	2964422	C	T	SNP	LOC101929469	ENST00000382678	human	ensembl	74_37	-1	known	missense	c.284	p.G95D	0.000	NULL	NULL	-	no_errors	AC005841.1	Clone_based_ensembl_gene	ENSG00000206044	tier1	-	-	88	0	0.00	83	30	26.55
LOC654342	0	genome.wustl.edu	37	2	91825016	91825016	+	RNA	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	2	91825016	91825016	G	A	SNP	LOC654342	ENST00000608018	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC027612.6	Clone_based_vega_gene	ENSG00000143429	tier1	-	-	78	0	0.00	94	15	13.76
MAGI2	0	genome.wustl.edu	37	7	77762345	77762345	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	7	77762345	77762345	C	G	SNP	MAGI2	ENST00000354212	human	ensembl	74_37	-1	known	missense	c.3064	p.E1022Q	1.000	NULL	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI2	HGNC	ENSG00000187391	tier1	-	-	45	0	0.00	36	25	40.98
MAN1A2	0	genome.wustl.edu	37	1	117963270	117963270	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	1	117963270	117963270	A	G	SNP	MAN1A2	ENST00000356554	human	ensembl	74_37	+1	known	missense	c.854	p.E285G	1.000	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	MAN1A2	HGNC	ENSG00000198162	tier1	-	-	76	0	0.00	58	4	6.45
MAPK3	0	genome.wustl.edu	37	16	30129434	30129434	+	Silent	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	16	30129434	30129434	G	A	SNP	MAPK3	ENST00000263025	human	ensembl	74_37	-1	known	silent	c.594	p.T198	0.038	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_ERK1/2,prints_MAPK_ERK3/4	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_ERK1/2,prints_MAPK_ERK3/4	-	no_errors	MAPK3	HGNC	ENSG00000102882	tier1	-	-	34	0	0.00	38	13	25.49
MARCH2	0	genome.wustl.edu	37	19	8503364	8503364	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	19	8503364	8503364	G	T	SNP	MARCH2	ENST00000215555	human	ensembl	74_37	+1	known	missense	c.675	p.E225D	0.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING-CH,pfscan_Znf_RING	-	no_errors	MARCH2	HGNC	ENSG00000099785	tier1	-	-	79	0	0.00	111	6	5.13
MBL2	0	genome.wustl.edu	37	10	54531301	54531301	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	10	54531301	54531301	C	A	SNP	MBL2	ENST00000373968	human	ensembl	74_37	-1	known	missense	c.95	p.C32F	0.908	NULL	pfam_C-type_lectin,pfam_Collagen,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	MBL2	HGNC	ENSG00000165471	tier1	rs199957742	-	34	0	0.00	30	17	36.17
MDM1	0	genome.wustl.edu	37	12	68720467	68720467	+	Silent	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	12	68720467	68720467	G	T	SNP	MDM1	ENST00000303145	human	ensembl	74_37	-1	known	silent	c.468	p.T156	0.003	NULL	NULL	-	no_errors	MDM1	HGNC	ENSG00000111554	tier1	-	-	38	0	0.00	35	17	32.69
MED1	0	genome.wustl.edu	37	17	37566857	37566857	+	Silent	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	17	37566857	37566857	G	A	SNP	MED1	ENST00000300651	human	ensembl	74_37	-1	known	silent	c.1617	p.N539	1.000	NULL	pfam_Mediator_Med1_met/fun	-	no_errors	MED1	HGNC	ENSG00000125686	tier1	-	-	28	0	0.00	23	22	48.89
MGAM	0	genome.wustl.edu	37	7	141705417	141705417	+	Silent	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	7	141705417	141705417	T	C	SNP	MGAM	ENST00000549489	human	ensembl	74_37	+1	known	silent	c.87	p.V29	0.002	NULL	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335	tier1	-	-	47	0	0.00	40	5	10.87
MUC16	0	genome.wustl.edu	37	19	9085944	9085944	+	Silent	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	19	9085944	9085944	G	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	silent	c.5871	p.I1957	0.081	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	44	0	0.00	62	4	6.06
MYCT1	0	genome.wustl.edu	37	6	153019103	153019103	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	6	153019103	153019103	T	G	SNP	MYCT1	ENST00000367245	human	ensembl	74_37	+1	known	missense	c.66	p.D22E	0.956	NULL	NULL	-	no_errors	MYCT1	HGNC	ENSG00000120279				38	0	0.00	44	4	8.00
MYH13	0	genome.wustl.edu	37	17	10267795	10267795	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	17	10267795	10267795	C	T	SNP	MYH13	ENST00000252172	human	ensembl	74_37	-1	known	missense	c.53	p.R18Q	1.000	NULL	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH13	HGNC	ENSG00000006788	tier1	-	-	41	0	0.00	16	34	68.00
MYLK	0	genome.wustl.edu	37	3	123356985	123356985	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	3	123356985	123356985	C	A	SNP	MYLK	ENST00000360304	human	ensembl	74_37	-1	known	missense	c.4894	p.V1632L	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	MYLK	HGNC	ENSG00000065534	tier1	-	-	72	0	0.00	37	28	43.08
NBAS	0	genome.wustl.edu	37	2	15608590	15608590	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	2	15608590	15608590	G	A	SNP	NBAS	ENST00000281513	human	ensembl	74_37	-1	known	missense	c.1793	p.A598V	1.000	NULL	pfam_Sec39,superfamily_Quino_amine_DH_bsu	-	no_errors	NBAS	HGNC	ENSG00000151779	tier1	-	-	60	0	0.00	70	4	5.33
NBAS	0	genome.wustl.edu	37	2	15307195	15307195	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	2	15307195	15307195	G	T	SNP	NBAS	ENST00000281513	human	ensembl	74_37	-1	known	missense	c.7093	p.R2365S	0.000	NULL	pfam_Sec39,superfamily_Quino_amine_DH_bsu	-	no_errors	NBAS	HGNC	ENSG00000151779				19	0	0.00	32	4	11.11
NEB	0	genome.wustl.edu	37	2	152435902	152435902	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	2	152435902	152435902	C	T	SNP	NEB	ENST00000397345	human	ensembl	74_37	-1	known	missense	c.16654	p.D5552N	1.000	smart_Nebulin_35r-motif,pfscan_Nebulin_35r-motif	pfam_Nebulin_35r-motif,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Adhesion_dom,superfamily_6-PGluconate_DH_C-like,smart_Nebulin_35r-motif,smart_SH3_domain,pfscan_Nebulin_35r-motif,pfscan_SH3_domain,prints_Nebulin	-	no_errors	NEB	HGNC	ENSG00000183091	tier1	-	-	84	0	0.00	84	19	18.27
NFE2L2	0	genome.wustl.edu	37	2	178098810	178098810	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	2	178098810	178098810	C	G	SNP	NFE2L2	ENST00000397062	human	ensembl	74_37	-1	known	missense	c.235	p.E79Q	1.000	NULL	pfam_bZIP,superfamily_TF_DNA-bd,superfamily_Serpin_dom,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2L2	HGNC	ENSG00000116044	tier1	-	-	66	0	0.00	55	57	50.89
NLRP14	0	genome.wustl.edu	37	11	7060994	7060994	+	Silent	SNP	A	A	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	11	7060994	7060994	A	G	SNP	NLRP14	ENST00000299481	human	ensembl	74_37	+1	known	silent	c.339	p.Q113	0.000	NULL	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP14	HGNC	ENSG00000158077	tier1	-	-	47	0	0.00	21	18	46.15
NNMT	0	genome.wustl.edu	37	11	114168879	114168879	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	11	114168879	114168879	A	G	SNP	NNMT	ENST00000299964	human	ensembl	74_37	+1	known	missense	c.361	p.R121G	1.000	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	pfam_NNMT_TEMT_trans,pirsf_NNMT_TEMT_trans	-	no_errors	NNMT	HGNC	ENSG00000166741				65	0	0.00	69	4	5.48
NOC3L	0	genome.wustl.edu	37	10	96117718	96117718	+	RNA	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	10	96117718	96117718	T	C	SNP	NOC3L	ENST00000463649	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NOC3L	HGNC	ENSG00000173145	tier1	-	-	30	0	0.00	20	17	45.95
OPN4	0	genome.wustl.edu	37	10	88415912	88415912	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	10	88415912	88415912	G	A	SNP	OPN4	ENST00000372071	human	ensembl	74_37	+1	known	missense	c.145	p.A49T	0.779	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Opsin	-	no_errors	OPN4	HGNC	ENSG00000122375	tier1	-	-	77	0	0.00	53	37	41.11
OR10G2	0	genome.wustl.edu	37	14	22102245	22102245	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	14	22102245	22102245	C	T	SNP	OR10G2	ENST00000542433	human	ensembl	74_37	-1	known	missense	c.754	p.V252M	0.880	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G2	HGNC	ENSG00000255582	tier1	-	-	54	0	0.00	104	7	6.31
OR8I2	0	genome.wustl.edu	37	11	55861518	55861518	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	11	55861518	55861518	G	T	SNP	OR8I2	ENST00000302124	human	ensembl	74_37	+1	known	missense	c.735	p.M245I	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8I2	HGNC	ENSG00000172154				36	0	0.00	52	3	5.45
OTUD7A	0	genome.wustl.edu	37	15	31822940	31822940	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	15	31822940	31822940	C	T	SNP	OTUD7A	ENST00000382902	human	ensembl	74_37	-1	known	missense	c.622	p.G208R	1.000	pfam_OTU,pfscan_OTU	pfam_OTU,superfamily_UBA-like,smart_Znf_A20,pfscan_OTU,pfscan_Znf_A20	-	no_errors	OTUD7A	HGNC	ENSG00000169918	tier1	-	-	82	0	0.00	67	4	5.63
PANX1	0	genome.wustl.edu	37	11	93911580	93911580	+	Frame_Shift_Del	DEL	C	C	-			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	11	93911580	93911580	C	-	DEL	PANX1	ENST00000227638	human	ensembl	74_37	+1	known	frame_shift_del	c.367	p.P124fs	1.000	pfam_Innexin,pfscan_Innexin	pfam_Innexin,pfscan_Innexin	-	no_errors	PANX1	HGNC	ENSG00000110218	tier1			26	0	0.00	33	2	5.71
PCDH10	0	genome.wustl.edu	37	4	134072084	134072084	+	Silent	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	4	134072084	134072084	T	C	SNP	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	silent	c.789	p.S263	0.686	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650	tier1	-	-	32	0	0.00	31	4	11.43
PLD4	0	genome.wustl.edu	37	14	105398216	105398216	+	Frame_Shift_Del	DEL	C	C	-			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	14	105398216	105398216	C	0	DEL	PLD4	ENST00000392593	human	ensembl	74_37	+1	known	frame_shift_del	c.1050	p.P352fs	0.962	NULL	pfam_PLipase_D/transphosphatidylase,smart_PLipase_D/transphosphatidylase,pfscan_PLipase_D/transphosphatidylase	-	no_errors	PLD4	HGNC	ENSG00000166428				49	0	0.00	72	7	8.86
PROL1	0	genome.wustl.edu	37	4	71275204	71275204	+	Nonsense_Mutation	SNP	T	T	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	4	71275204	71275204	T	A	SNP	PROL1	ENST00000399575	human	ensembl	74_37	+1	putative	nonsense	c.159	p.Y53*	0.000	NULL	NULL	-	no_errors	PROL1	HGNC	ENSG00000171199	tier1	-	-	35	0	0.00	11	22	66.67
PROL1	0	genome.wustl.edu	37	4	71275205	71275205	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	4	71275205	71275205	G	A	SNP	PROL1	ENST00000399575	human	ensembl	74_37	+1	putative	missense	c.160	p.D54N	0.000	NULL	NULL	-	no_errors	PROL1	HGNC	ENSG00000171199	tier1	-	-	35	0	0.00	11	25	69.44
PRSS16	0	genome.wustl.edu	37	6	27215748	27215748	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	6	27215748	27215748	C	T	SNP	PRSS16	ENST00000230582	human	ensembl	74_37	+1	known	missense	c.158	p.A53V	0.001	NULL	pfam_Peptidase_S28	-	no_errors	PRSS16	HGNC	ENSG00000112812				40	0	0.00	41	3	6.82
PRSS3	0	genome.wustl.edu	37	9	33794809	33794809	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	9	33794809	33794809	G	A	SNP	PRSS3	ENST00000342836	human	ensembl	74_37	+1	known	missense	c.20	p.S7N	0.000	NULL	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS3	HGNC	ENSG00000010438				38	0	0.00	64	4	5.88
PRSS3	0	genome.wustl.edu	37	9	33794812	33794812	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	9	33794812	33794812	G	T	SNP	PRSS3	ENST00000342836	human	ensembl	74_37	+1	known	missense	c.23	p.G8V	0.000	NULL	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRSS3	HGNC	ENSG00000010438				37	0	0.00	66	4	5.71
PTPRD	0	genome.wustl.edu	37	9	8518250	8518250	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	9	8518250	8518250	C	A	SNP	PTPRD	ENST00000356435	human	ensembl	74_37	-1	known	missense	c.1141	p.A381S	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRD	HGNC	ENSG00000153707				22	0	0.00	31	2	6.06
RAPGEF2	0	genome.wustl.edu	37	4	160259537	160259537	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	4	160259537	160259537	T	G	SNP	RAPGEF2	ENST00000264431	human	ensembl	74_37	+1	known	missense	c.1727	p.L576W	0.975	superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,pfam_Ras-assoc,pfam_Ras-like_Gua-exchang_fac_N,pfam_PDZ,pfam_cNMP-bd_dom,superfamily_Ras_GEF_dom,superfamily_PDZ,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_Ras-like_Gua-exchang_fac_N,smart_PDZ,smart_Ras-assoc,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_PDZ,pfscan_Ras-assoc,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	RAPGEF2	HGNC	ENSG00000109756	tier1	-	-	87	0	0.00	16	50	75.76
RCCD1	0	genome.wustl.edu	37	15	91500556	91500556	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	15	91500556	91500556	G	C	SNP	RCCD1	ENST00000394258	human	ensembl	74_37	+1	known	missense	c.380	p.G127A	0.001	superfamily_RCC1/BLIP-II	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RCCD1	HGNC	ENSG00000166965	tier1	-	-	13	0	0.00	5	6	54.55
RSPH10B2	0	genome.wustl.edu	37	7	6803577	6803577	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	7	6803577	6803577	G	C	SNP	RSPH10B2	ENST00000297186	human	ensembl	74_37	+1	known	missense	c.418	p.V140L	0.133	pfam_MORN,smart_MORN	pfam_MORN,smart_MORN	-	no_errors	RSPH10B2	HGNC	ENSG00000169402	tier1	-	-	109	0	0.00	107	9	7.76
RYR2	0	genome.wustl.edu	37	1	237617836	237617836	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	1	237617836	237617836	C	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	nonsense	c.1432	p.R478*	0.011	pfam_Ca-rel_channel	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	51	0	0.00	18	77	81.05
SAMD3	0	genome.wustl.edu	37	6	130536494	130536495	+	RNA	INS	-	-	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	6	130536494	130536495	-	T	INS	SAMD3	ENST00000533296	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	SAMD3	HGNC	ENSG00000164483	tier1			15	0	0.00	16	3	15.79
SCP2	0	genome.wustl.edu	37	1	53516286	53516286	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	1	53516286	53516286	C	A	SNP	SCP2	ENST00000371514	human	ensembl	74_37	+1	known	missense	c.1554	p.F518L	1.000	pfam_SCP2_sterol-bd_dom,superfamily_SCP2_sterol-bd_dom	pfam_SCP2_sterol-bd_dom,pfam_Thiolase_C,pfam_Thiolase_N,superfamily_Thiolase-like,superfamily_SCP2_sterol-bd_dom	-	no_errors	SCP2	HGNC	ENSG00000116171				42	0	0.00	35	2	5.41
SGIP1	0	genome.wustl.edu	37	1	67109265	67109267	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	1	67109265	67109267	GAA	-	DEL	SGIP1	ENST00000237247	human	ensembl	74_37	+1	known	in_frame_del	c.334_336	p.E115in_frame_del	1.000:1.000:1.000	NULL	pfam_Muniscin_C-term_mu_dom,pfam_Clathrin_mu_C,superfamily_Clathrin_mu_C	-	no_errors	SGIP1	HGNC	ENSG00000118473	tier1			21	0	0.00	11	18	62.07
SIRPB2	0	genome.wustl.edu	37	20	1471971	1471971	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	20	1471971	1471971	G	A	SNP	SIRPB2	ENST00000359801	human	ensembl	74_37	-1	known	missense	c.35	p.A12V	0.000	NULL	pfam_Ig_V-set,pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIRPB2	HGNC	ENSG00000196209				41	0	0.00	76	4	5.00
SLC25A41	0	genome.wustl.edu	37	19	6433618	6433618	+	Silent	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	19	6433618	6433618	G	A	SNP	SLC25A41	ENST00000321510	human	ensembl	74_37	-1	known	silent	c.87	p.A29	0.000	NULL	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A41	HGNC	ENSG00000181240	tier1	-	-	74	0	0.00	41	40	49.38
SNORA55	0	genome.wustl.edu	37	1	40033068	40033068	+	RNA	SNP	C	C	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	1	40033068	40033068	C	A	SNP	SNORA55	ENST00000364587	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNORA55	HGNC	ENSG00000201457	tier1	-	-	49	0	0.00	10	25	71.43
SOX6	0	genome.wustl.edu	37	11	16071402	16071402	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	11	16071402	16071402	T	C	SNP	SOX6	ENST00000352083	human	ensembl	74_37	-1	known	missense	c.1334	p.Q445R	1.000	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX6	HGNC	ENSG00000110693	tier1	-	-	58	0	0.00	40	40	50.00
STK31	0	genome.wustl.edu	37	7	23872028	23872028	+	RNA	DEL	G	G	-			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	7	23872028	23872028	G	-	DEL	STK31	ENST00000405627	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.097	-	-	-	no_errors	STK31	HGNC	ENSG00000196335	tier1			10	0	0.00	5	3	37.50
TBCCD1	0	genome.wustl.edu	37	3	186287935	186287935	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	3	186287935	186287935	G	C	SNP	TBCCD1	ENST00000446782	human	ensembl	74_37	-1	putative	missense	c.9	p.D3E	0.855	NULL	pfam_Tubulin-bd_cofactor_C_dom,superfamily_Adenylate_cyclase-assoc_CAP_C,smart_CARP_motif	-	no_errors	TBCCD1	HGNC	ENSG00000113838	tier1	-	-	46	0	0.00	74	28	27.45
TBX15	0	genome.wustl.edu	37	1	119427370	119427370	+	Silent	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	1	119427370	119427370	G	A	SNP	TBX15	ENST00000207157	human	ensembl	74_37	-1	known	silent	c.1476	p.S492	0.002	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX15	HGNC	ENSG00000092607	tier1	-	-	68	0	0.00	42	5	10.64
TELO2	0	genome.wustl.edu	37	16	1557008	1557008	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	16	1557008	1557008	G	A	SNP	TELO2	ENST00000262319	human	ensembl	74_37	+1	known	missense	c.2182	p.A728T	0.925	superfamily_ARM-type_fold	pfam_Telomere_length_regulation_dom,superfamily_ARM-type_fold	-	no_errors	TELO2	HGNC	ENSG00000100726				60	0	0.00	74	4	5.13
TGFBR2	0	genome.wustl.edu	37	3	30713885	30713885	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	3	30713885	30713885	C	G	SNP	TGFBR2	ENST00000359013	human	ensembl	74_37	+1	known	missense	c.1285	p.L429V	0.976	pirsf_Transform_growth_fac-b_typ-2,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_TGFB_receptor,pfscan_Prot_kinase_dom	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_TGFB_receptor,pfscan_Prot_kinase_dom	-	no_errors	TGFBR2	HGNC	ENSG00000163513	tier1	-	-	21	0	0.00	4	17	80.95
TGM6	0	genome.wustl.edu	37	20	2378611	2378611	+	Silent	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	20	2378611	2378611	C	T	SNP	TGM6	ENST00000202625	human	ensembl	74_37	+1	known	silent	c.591	p.S197	0.994	NULL	pfam_Transglutaminase_C,pfam_Transglutaminase_N,pfam_Transglutaminase-like,superfamily_Ig_E-set,superfamily_Transglutaminase_C,smart_Transglutaminase-like	-	no_errors	TGM6	HGNC	ENSG00000166948	tier1	-	-	44	0	0.00	45	40	47.06
THBD	0	genome.wustl.edu	37	20	23029775	23029775	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	20	23029775	23029775	C	T	SNP	THBD	ENST00000377103	human	ensembl	74_37	-1	known	missense	c.367	p.A123T	0.730	pirsf_CD93/CD141,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pirsf_CD93/CD141,pfam_Tme5_EGF-like,pfam_EGF-like_Ca-bd_dom,superfamily_C-type_lectin_fold,smart_C-type_lectin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,prints_Thrombomodulin,pfscan_C-type_lectin	-	no_errors	THBD	HGNC	ENSG00000178726				34	0	0.00	54	4	6.90
TLDC2	0	genome.wustl.edu	37	20	35517755	35517755	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	20	35517755	35517755	G	A	SNP	TLDC2	ENST00000217320	human	ensembl	74_37	+1	known	missense	c.614	p.C205Y	0.956	pfam_TLDc,smart_TLDc	pfam_TLDc,smart_TLDc	-	no_errors	TLDC2	HGNC	ENSG00000101342	tier1	-	-	72	0	0.00	90	5	5.26
TMC8	0	genome.wustl.edu	37	17	76130023	76130023	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	17	76130023	76130023	G	T	SNP	TMC8	ENST00000318430	human	ensembl	74_37	+1	known	missense	c.758	p.C253F	1.000	NULL	pfam_TMC	-	no_errors	TMC8	HGNC	ENSG00000167895	tier1	-	-	40	0	0.00	43	4	8.51
TMEM59L	0	genome.wustl.edu	37	19	18729257	18729257	+	Silent	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	19	18729257	18729257	C	T	SNP	TMEM59L	ENST00000262817	human	ensembl	74_37	+1	known	silent	c.855	p.S285	1.000	NULL	pfam_Uncharacterised_TMEM59	-	no_errors	TMEM59L	HGNC	ENSG00000105696	tier1	-	-	59	0	0.00	70	4	5.41
TMEM60	0	genome.wustl.edu	37	7	77423460	77423460	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	7	77423460	77423460	T	-	DEL	TMEM60	ENST00000257663	human	ensembl	74_37	-1	known	frame_shift_del	c.231	p.A78fs	0.998	NULL	pfam_TM_Fragile-X-F-assoc	-	no_errors	TMEM60	HGNC	ENSG00000135211	tier1			41	0	0.00	69	5	6.76
TNFRSF21	0	genome.wustl.edu	37	6	47202574	47202574	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	6	47202574	47202574	G	T	SNP	TNFRSF21	ENST00000296861	human	ensembl	74_37	-1	known	missense	c.1570	p.P524T	0.957	NULL	pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,pfscan_Death_domain,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_21	-	no_errors	TNFRSF21	HGNC	ENSG00000146072				69	0	0.00	68	4	5.56
TP53	0	genome.wustl.edu	37	17	7578191	7578191	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	17	7578191	7578191	A	C	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.658	p.Y220D	0.998	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	68	0	0.00	19	58	75.32
TP53TG5	0	genome.wustl.edu	37	20	44004158	44004158	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	20	44004158	44004158	T	C	SNP	TP53TG5	ENST00000372726	human	ensembl	74_37	-1	known	missense	c.289	p.N97D	0.000	NULL	NULL	-	no_errors	TP53TG5	HGNC	ENSG00000124251				25	0	0.00	35	2	5.41
TPCN1	0	genome.wustl.edu	37	12	113717958	113717958	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	12	113717958	113717958	A	G	SNP	TPCN1	ENST00000541517	human	ensembl	74_37	+1	known	missense	c.1516	p.I506V	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	TPCN1	HGNC	ENSG00000186815	tier1	-	-	46	0	0.00	27	18	40.00
TRIM37	0	genome.wustl.edu	37	17	57109426	57109426	+	Silent	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	17	57109426	57109426	G	A	SNP	TRIM37	ENST00000262294	human	ensembl	74_37	-1	known	silent	c.1779	p.S593	0.999	NULL	pfam_Znf_B-box,pfam_MATH,superfamily_TRAF-like,smart_Znf_B-box,smart_Bbox_C,smart_MATH,pfscan_MATH,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM37	HGNC	ENSG00000108395	tier1	-	-	46	0	0.00	72	5	6.49
TRIM71	0	genome.wustl.edu	37	3	32932232	32932232	+	Silent	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	3	32932232	32932232	C	T	SNP	TRIM71	ENST00000383763	human	ensembl	74_37	+1	known	silent	c.1536	p.H512	0.990	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM71	HGNC	ENSG00000206557	tier1	-	-	13	0	0.00	13	5	27.78
TRPC7	0	genome.wustl.edu	37	5	135692820	135692820	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	5	135692820	135692820	C	T	SNP	TRPC7	ENST00000513104	human	ensembl	74_37	-1	known	missense	c.256	p.V86M	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,pfam_PKD1_2_channel,superfamily_Ankyrin_rpt-contain_dom,superfamily_ARM-type_fold,smart_Ankyrin_rpt,prints_TRPC7_channel,prints_TRPC_channel,tigrfam_TRP_channel	-	no_errors	TRPC7	HGNC	ENSG00000069018	tier1	-	-	23	0	0.00	7	14	66.67
TTN	0	genome.wustl.edu	37	2	179597727	179597727	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	2	179597727	179597727	C	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.12444	p.K4148N	1.000	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	52	0	0.00	34	8	19.05
TXLNG2P	0	genome.wustl.edu	37	Y	21753779	21753779	+	RNA	DEL	A	A	-			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	Y	21753779	21753779	A	-	DEL	TXLNG2P	ENST00000488280	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	TXLNG2P	HGNC	ENSG00000131002	tier1			49	0	0.00	13	2	13.33
UBAC2	0	genome.wustl.edu	37	13	99890703	99890703	+	Frame_Shift_Del	DEL	C	C	-			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	13	99890703	99890703	C	-	DEL	UBAC2	ENST00000376440	human	ensembl	74_37	+1	known	frame_shift_del	c.179	p.F61fs	1.000	NULL	pfam_UBA/Ts_N,superfamily_UBA-like,smart_UBA/transl_elong_EF1B_N_euk,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAC2	HGNC	ENSG00000134882	tier1			53	0	0.00	40	13	24.53
UNC93A	0	genome.wustl.edu	37	6	167728900	167728900	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	6	167728900	167728900	T	C	SNP	UNC93A	ENST00000230256	human	ensembl	74_37	+1	known	missense	c.1334	p.V445A	0.000	superfamily_MFS_dom_general_subst_transpt	pfam_Ion_channel_UNC-93,superfamily_MFS_dom_general_subst_transpt	-	no_errors	UNC93A	HGNC	ENSG00000112494				91	0	0.00	78	13	14.29
UNC93A	0	genome.wustl.edu	37	6	167728901	167728901	+	Silent	SNP	C	C	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	6	167728901	167728901	C	G	SNP	UNC93A	ENST00000230256	human	ensembl	74_37	+1	known	silent	c.1335	p.V445	0.000	superfamily_MFS_dom_general_subst_transpt	pfam_Ion_channel_UNC-93,superfamily_MFS_dom_general_subst_transpt	-	no_errors	UNC93A	HGNC	ENSG00000112494				89	0	0.00	78	12	13.33
USH2A	0	genome.wustl.edu	37	1	215901650	215901650	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	1	215901650	215901650	C	G	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.11788	p.D3930H	0.001	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	58	0	0.00	98	6	5.77
USP14	0	genome.wustl.edu	37	18	203180	203180	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	18	203180	203180	A	G	SNP	USP14	ENST00000261601	human	ensembl	74_37	+1	known	missense	c.1025	p.K342R	1.000	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,smart_Ubiquitin_dom,pfscan_Peptidase_C19/C67,pfscan_Ubiquitin_supergroup	-	no_errors	USP14	HGNC	ENSG00000101557	tier1	-	-	59	0	0.00	25	25	50.00
VCL	0	genome.wustl.edu	37	10	75873970	75873970	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	10	75873970	75873970	G	A	SNP	VCL	ENST00000211998	human	ensembl	74_37	+1	known	missense	c.2978	p.R993H	1.000	pfam_Vinculin/catenin,superfamily_Vinculin/catenin	pfam_Vinculin/catenin,superfamily_Vinculin/catenin,prints_Vinculin	-	no_errors	VCL	HGNC	ENSG00000035403				21	0	0.00	27	3	10.00
VTI1A	0	genome.wustl.edu	37	10	114220329	114220329	+	Silent	SNP	A	A	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	10	114220329	114220329	A	G	SNP	VTI1A	ENST00000393077	human	ensembl	74_37	+1	known	silent	c.141	p.E47	1.000	pfam_Vesicle_trsprt_v-SNARE_N,superfamily_t-SNARE	pfam_Vesicle_trsprt_v-SNARE_N,superfamily_t-SNARE,smart_T_SNARE_dom	-	no_errors	VTI1A	HGNC	ENSG00000151532	tier1	-	-	66	0	0.00	74	15	16.85
VWF	0	genome.wustl.edu	37	12	6103140	6103140	+	Silent	SNP	G	G	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	12	6103140	6103140	G	T	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	silent	c.6486	p.I2162	0.915	pirsf_VWF,pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799				28	0	0.00	32	2	5.88
XAB2	0	genome.wustl.edu	37	19	7684915	7684915	+	Silent	SNP	C	C	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	19	7684915	7684915	C	A	SNP	XAB2	ENST00000358368	human	ensembl	74_37	-1	known	silent	c.2313	p.L771	1.000	NULL	smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	XAB2	HGNC	ENSG00000076924	tier1	-	-	45	0	0.00	36	9	20.00
ZFYVE1	0	genome.wustl.edu	37	14	73442338	73442338	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	14	73442338	73442338	A	G	SNP	ZFYVE1	ENST00000553891	human	ensembl	74_37	-1	known	missense	c.1727	p.L576P	0.998	superfamily_Znf_FYVE_PHD,superfamily_Growth_fac_rcpt_N_dom	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,superfamily_P-loop_NTPase,superfamily_Growth_fac_rcpt_N_dom,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE1	HGNC	ENSG00000165861	tier1	-	-	50	0	0.00	58	4	6.45
ZNF257	0	genome.wustl.edu	37	19	22271020	22271020	+	Silent	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	19	22271020	22271020	G	A	SNP	ZNF257	ENST00000594947	human	ensembl	74_37	+1	known	silent	c.468	p.K156	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF257	HGNC	ENSG00000197134	tier1	-	-	62	0	0.00	76	4	5.00
ZNF423	0	genome.wustl.edu	37	16	49557603	49557603	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	16	49557603	49557603	C	T	SNP	ZNF423	ENST00000262383	human	ensembl	74_37	-1	known	missense	c.3757	p.G1253R	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF423	HGNC	ENSG00000102935	tier1	-	-	39	0	0.00	13	14	51.85
ZNF440	0	genome.wustl.edu	37	19	11942659	11942659	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	19	11942659	11942659	C	G	SNP	ZNF440	ENST00000304060	human	ensembl	74_37	+1	known	missense	c.668	p.T223S	0.989	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF440	HGNC	ENSG00000171295	tier1	-	-	114	0	0.00	113	31	21.53
ZNF496	0	genome.wustl.edu	37	1	247463850	247463850	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	1	247463850	247463850	G	A	SNP	ZNF496	ENST00000366498	human	ensembl	74_37	-1	known	missense	c.1843	p.R615C	1.000	pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF496	HGNC	ENSG00000162714	tier1	-	-	37	0	0.00	35	7	16.67
ZNF646	0	genome.wustl.edu	37	16	31088787	31088787	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	16	31088787	31088787	G	A	SNP	ZNF646	ENST00000300850	human	ensembl	74_37	+1	known	missense	c.1142	p.R381H	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF646	HGNC	ENSG00000167395	tier1	-	-	50	0	0.00	23	42	64.62
ZNF767	0	genome.wustl.edu	37	7	149250069	149250069	+	RNA	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	7	149250069	149250069	G	A	SNP	ZNF767	ENST00000463567	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.092	-	-	-	no_errors	ZNF767	HGNC	ENSG00000133624	tier1	-	-	41	0	0.00	30	16	34.78
ZNF783	0	genome.wustl.edu	37	7	148990944	148990944	+	Silent	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	7	148990944	148990944	G	A	SNP	ZNF783	ENST00000481519	human	ensembl	74_37	+1	known	silent	c.645	p.G215	0.000	NULL	NULL	-	no_errors	ZNF783	HGNC	ENSG00000204946	tier1	-	-	34	0	0.00	23	4	14.81
ZNF792	0	genome.wustl.edu	37	19	35449655	35449655	+	Silent	SNP	G	G	A			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	19	35449655	35449655	G	A	SNP	ZNF792	ENST00000404801	human	ensembl	74_37	-1	known	silent	c.1104	p.C368	0.984	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF792	HGNC	ENSG00000180884	tier1	-	-	56	0	0.00	62	4	5.97
ZNF93	0	genome.wustl.edu	37	19	20045338	20045338	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	19	20045338	20045338	T	C	SNP	ZNF93	ENST00000343769	human	ensembl	74_37	+1	known	missense	c.1574	p.I525T	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF93	HGNC	ENSG00000184635	tier1	-	-	53	0	0.00	53	10	15.62
ZWINT	0	genome.wustl.edu	37	10	58118341	58118341	+	Silent	SNP	C	C	T			TCGA-LN-A7HZ-01A-31D-A351-09	TCGA-LN-A7HZ-10A-01D-A351-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	9a12a7c6-72e4-4d26-9c62-36662e8d831e	59e232d0-2d74-4784-ad67-5d92de200106	10	58118341	58118341	C	T	SNP	ZWINT	ENST00000373944	human	ensembl	74_37	-1	known	silent	c.768	p.G256	0.000	NULL	NULL	-	no_errors	ZWINT	HGNC	ENSG00000122952	tier1	-	-	44	0	0.00	33	26	44.07
