Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA4	0	genome.wustl.edu	37	1	94497396	94497396	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	94497396	94497396	G	A	SNP	ABCA4	ENST00000370225	human	ensembl	74_37	-1	known	nonsense	c.4066	p.Q1356*	0.923	tigrfam_Rim_ABC_transpt	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,tigrfam_Rim_ABC_transpt	-	no_errors	ABCA4	HGNC	ENSG00000198691				110	0	0.00	45	3	6.25
ABHD17A	0	genome.wustl.edu	37	19	1881527	1881527	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	1881527	1881527	G	-	DEL	ABHD17A	ENST00000250974	human	ensembl	74_37	-1	known	frame_shift_del	c.39	p.C14fs	1.000	NULL	pfam_Dienelactn_hydro	-	no_errors	ABHD17A	HGNC	ENSG00000129968	tier1			34	0	0.00	20	4	16.67
ABHD17A	0	genome.wustl.edu	37	19	1881529	1881530	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	1881529	1881530	AG	-	DEL	ABHD17A	ENST00000250974	human	ensembl	74_37	-1	known	frame_shift_del	c.37_36	p.F13fs	1.000:0.997	NULL	pfam_Dienelactn_hydro	-	no_errors	ABHD17A	HGNC	ENSG00000129968	tier1			32	0	0.00	20	4	16.67
ACO1	0	genome.wustl.edu	37	9	32433728	32433729	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	9	32433728	32433729	TG	-	DEL	ACO1	ENST00000309951	human	ensembl	74_37	+1	known	frame_shift_del	c.1854_1855	p.V619fs	0.998:1.000	superfamily_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	pfam_Acoase/IPM_deHydtase_lsu_aba,pfam_AconitaseA/IPMdHydase_ssu_swvl,superfamily_Acoase/IPM_deHydtase_lsu_aba,superfamily_Aconitase/3IPM_dehydase_swvl,prints_Acoase/IPM_deHydtase_lsu_aba,tigrfam_Aconitase/Fe_reg_prot_2	-	no_errors	ACO1	HGNC	ENSG00000122729	tier1			54	0	0.00	30	22	42.31
ACSM5	0	genome.wustl.edu	37	16	20432632	20432632	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	20432632	20432632	G	T	SNP	ACSM5	ENST00000331849	human	ensembl	74_37	+1	known	missense	c.676	p.A226S	0.195	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM5	HGNC	ENSG00000183549				72	0	0.00	31	6	16.22
ADAM30	0	genome.wustl.edu	37	1	120438560	120438560	+	Silent	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	120438560	120438560	G	T	SNP	ADAM30	ENST00000369400	human	ensembl	74_37	-1	known	silent	c.400	p.R134	0.882	pfam_Peptidase_M12B_N	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM30	HGNC	ENSG00000134249	tier1	-	-	62	0	0.00	41	12	22.64
ADHFE1	0	genome.wustl.edu	37	8	67356721	67356721	+	RNA	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	8	67356721	67356721	A	G	SNP	ADHFE1	ENST00000518781	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ADHFE1	HGNC	ENSG00000147576	tier1	-	-	34	0	0.00	19	5	20.83
ADORA2A	0	genome.wustl.edu	37	22	24836564	24836564	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	22	24836564	24836564	G	T	SNP	ADORA2A	ENST00000337539	human	ensembl	74_37	+1	known	missense	c.346	p.V116L	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Adeno_A2A_rcpt,prints_GPCR_Rhodpsn,prints_Adenosn_rcpt	-	no_errors	ADORA2A	HGNC	ENSG00000128271				120	0	0.00	61	4	6.15
AFF3	0	genome.wustl.edu	37	2	100218011	100218013	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	100218011	100218013	GCT	-	DEL	AFF3	ENST00000356421	human	ensembl	74_37	-1	known	in_frame_del	c.1332_1330	p.S444in_frame_del	1.000:1.000:1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF3	HGNC	ENSG00000144218	tier1			44	0	0.00	28	5	15.15
ANKH	0	genome.wustl.edu	37	5	14769157	14769157	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	14769157	14769157	C	G	SNP	ANKH	ENST00000284268	human	ensembl	74_37	-1	known	missense	c.240	p.K80N	1.000	pfam_ANKH	pfam_ANKH	-	no_errors	ANKH	HGNC	ENSG00000154122	tier1	-	-	70	0	0.00	53	12	18.46
ANKRD18DP	0	genome.wustl.edu	37	3	197807315	197807315	+	RNA	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	3	197807315	197807315	G	T	SNP	ANKRD18DP	ENST00000335478	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ANKRD18DP	HGNC	ENSG00000226435	tier1	-	-	40	0	0.00	38	5	11.63
ANKS3	0	genome.wustl.edu	37	16	4749098	4749098	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	4749098	4749098	A	T	SNP	ANKS3	ENST00000304283	human	ensembl	74_37	-1	known	missense	c.1364	p.I455N	1.000	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS3	HGNC	ENSG00000168096	tier1	-	-	59	0	0.00	27	4	12.90
AP3S1	0	genome.wustl.edu	37	5	115177406	115177406	+	RNA	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	115177406	115177406	C	T	SNP	AP3S1	ENST00000514118	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AP3S1	HGNC	ENSG00000177879	tier1	-	-	53	0	0.00	6	11	64.71
ARHGEF6	0	genome.wustl.edu	37	X	135772773	135772773	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	X	135772773	135772773	A	T	SNP	ARHGEF6	ENST00000250617	human	ensembl	74_37	-1	known	missense	c.1181	p.M394K	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_SH3_2,pfam_SH3_domain,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_DH-domain,prints_SH3_domain,prints_SM22_calponin	-	no_errors	ARHGEF6	HGNC	ENSG00000129675	tier1	-	-	65	0	0.00	47	4	7.84
ASB8	0	genome.wustl.edu	37	12	48543223	48543223	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	48543223	48543223	G	T	SNP	ASB8	ENST00000317697	human	ensembl	74_37	-1	known	missense	c.793	p.Q265K	1.000	pfam_SOCS_C,smart_SOCS_C,pfscan_SOCS_C	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB8	HGNC	ENSG00000177981				56	0	0.00	36	3	7.69
ATP6V1H	0	genome.wustl.edu	37	8	54730058	54730058	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	8	54730058	54730058	G	C	SNP	ATP6V1H	ENST00000359530	human	ensembl	74_37	-1	known	missense	c.339	p.D113E	0.993	pfam_ATPase_V1-cplx_hsu,superfamily_ARM-type_fold,pirsf_ATPase_V1-cplx_hsu	pfam_ATPase_V1-cplx_hsu,pfam_ATPase_V1-cplx_hsu_C,superfamily_ARM-type_fold,pirsf_ATPase_V1-cplx_hsu	-	no_errors	ATP6V1H	HGNC	ENSG00000047249	tier1	-	-	67	0	0.00	42	20	32.26
ATR	0	genome.wustl.edu	37	3	142266582	142266583	+	Frame_Shift_Ins	INS	-	-	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	3	142266582	142266583	-	A	INS	ATR	ENST00000350721	human	ensembl	74_37	-1	known	frame_shift_ins	c.3342_3341	p.S1115fs	0.965:0.999	superfamily_ARM-type_fold	pfam_PI3/4_kinase_cat_dom,pfam_PIK-rel_kinase_FAT,pfam_UME,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_UME,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_HEAT_type_2,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATR	HGNC	ENSG00000175054	tier1			104	0	0.00	73	28	27.72
ATXN7	0	genome.wustl.edu	37	3	63898361	63898363	+	In_Frame_Del	DEL	GCA	GCA	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	GCA	GCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	3	63898361	63898363	GCA	-	DEL	ATXN7	ENST00000398590	human	ensembl	74_37	+1	known	in_frame_del	c.87_89	p.Q33in_frame_del	1.000:1.000:1.000	NULL	pfam_SCA7_dom	-	no_errors	ATXN7	HGNC	ENSG00000163635	tier1			20	0	0.00	3	2	40.00
BIRC6	0	genome.wustl.edu	37	2	32819095	32819095	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	32819095	32819095	C	T	SNP	BIRC6	ENST00000421745	human	ensembl	74_37	+1	known	missense	c.13469	p.A4490V	0.937	NULL	pfam_DUF3643,pfam_UBQ-conjugat_E2,pfam_BIR,pfam_UEV_N,superfamily_UBQ-conjugating_enzyme/RWD,superfamily_Galactose-bd-like,superfamily_WD40_repeat_dom,smart_BIR,pfscan_BIR,pfscan_UBQ-conjugat_E2	-	no_errors	BIRC6	HGNC	ENSG00000115760				59	0	0.00	38	4	9.52
BPIFA2	0	genome.wustl.edu	37	20	31756970	31756970	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	20	31756970	31756970	C	T	SNP	BPIFA2	ENST00000253362	human	ensembl	74_37	+1	known	missense	c.19	p.L7F	0.986	NULL	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom	-	no_errors	BPIFA2	HGNC	ENSG00000131050	tier1	-	-	49	0	0.00	38	10	20.83
BRD2	0	genome.wustl.edu	37	6	32939543	32939543	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	32939543	32939543	G	T	SNP	BRD2	ENST00000496118	human	ensembl	74_37	+1	putative	missense	c.279	p.Q93H	0.000	NULL	NULL	-	no_errors	BRD2	HGNC	ENSG00000204256	tier1	-	-	113	0	0.00	41	4	8.89
C12orf36	0	genome.wustl.edu	37	12	13529163	13529163	+	Silent	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	13529163	13529163	C	A	SNP	C12orf36	ENST00000318426	human	ensembl	74_37	-1	known	silent	c.177	p.L59	0.000	NULL	NULL	-	no_errors	C12orf36	HGNC	ENSG00000180861	tier1	-	-	107	0	0.00	52	26	33.33
C15orf27	0	genome.wustl.edu	37	15	76449047	76449047	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	15	76449047	76449047	G	T	SNP	C15orf27	ENST00000388942	human	ensembl	74_37	+1	known	missense	c.330	p.L110F	1.000	NULL	NULL	-	no_errors	C15orf27	HGNC	ENSG00000169758	tier1	-	-	127	0	0.00	72	4	5.26
C20orf112	0	genome.wustl.edu	37	20	31172603	31172603	+	RNA	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	20	31172603	31172603	C	T	SNP	C20orf112	ENST00000485364	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	C20orf112	HGNC	ENSG00000197183	tier1	-	-	41	0	0.00	21	4	16.00
C7	0	genome.wustl.edu	37	5	40934566	40934566	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	40934566	40934566	C	T	SNP	C7	ENST00000313164	human	ensembl	74_37	+1	known	missense	c.278	p.S93L	1.000	pfam_LDrepeatLR_classA_rpt,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt,prints_MAC_perforin	pfam_MACPF,pfam_Sushi_SCR_CCP,pfam_LDrepeatLR_classA_rpt,pfam_Thrombospondin_1_rpt,superfamily_Sushi_SCR_CCP,superfamily_Thrombospondin_1_rpt,superfamily_LDrepeatLR_classA_rpt,smart_Thrombospondin_1_rpt,smart_LDrepeatLR_classA_rpt,smart_MACPF,smart_Sushi_SCR_CCP,smart_FacI_MAC,pfscan_LDrepeatLR_classA_rpt,pfscan_Sushi_SCR_CCP,pfscan_Thrombospondin_1_rpt,prints_MAC_perforin	-	no_errors	C7	HGNC	ENSG00000112936	tier1	-	-	124	0	0.00	82	14	14.58
CACNA1A	0	genome.wustl.edu	37	19	13470592	13470592	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	13470592	13470592	G	T	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	missense	c.806	p.P269Q	0.971	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837				81	0	0.00	53	3	5.36
CACNA1C	0	genome.wustl.edu	37	12	2659819	2659819	+	RNA	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	2659819	2659819	A	G	SNP	CACNA1C	ENST00000491104	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CACNA1C	HGNC	ENSG00000151067	tier1	-	-	101	0	0.00	66	4	5.71
CACNA1E	0	genome.wustl.edu	37	1	181765953	181765953	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	181765953	181765953	A	G	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	missense	c.6358	p.R2120G	0.999	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216	tier1	-	-	42	0	0.00	48	4	7.69
CAMKMT	0	genome.wustl.edu	37	2	44993623	44993623	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	44993623	44993623	A	G	SNP	CAMKMT	ENST00000378494	human	ensembl	74_37	+1	known	missense	c.817	p.N273D	1.000	pfam_Nicotinamide_N-MeTfrase-like	pfam_Nicotinamide_N-MeTfrase-like	-	no_errors	CAMKMT	HGNC	ENSG00000143919	tier1	-	-	89	0	0.00	39	5	11.36
CAMTA1	0	genome.wustl.edu	37	1	7798315	7798315	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	7798315	7798315	G	T	SNP	CAMTA1	ENST00000303635	human	ensembl	74_37	+1	known	nonsense	c.3955	p.G1319*	1.000	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA1	HGNC	ENSG00000171735	tier1	-	-	22	0	0.00	9	3	25.00
CAMTA2	0	genome.wustl.edu	37	17	4885088	4885088	+	Silent	SNP	T	T	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	4885088	4885088	T	A	SNP	CAMTA2	ENST00000414043	human	ensembl	74_37	-1	known	silent	c.519	p.P173	0.990	NULL	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA2	HGNC	ENSG00000108509	tier1	-	-	40	0	0.00	33	4	10.81
CBX5	0	genome.wustl.edu	37	12	54645841	54645841	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	54645841	54645841	G	A	SNP	CBX5	ENST00000209875	human	ensembl	74_37	-1	known	missense	c.308	p.S103F	0.997	NULL	pfam_Chromo_shadow_dom,pfam_Chromo_domain,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Chromo_shadow_dom,pfscan_Chromo_domain/shadow,prints_Chromo_dom_subgr	-	no_errors	CBX5	HGNC	ENSG00000094916				31	0	0.00	31	2	6.06
CCDC141	0	genome.wustl.edu	37	2	179702195	179702195	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	179702195	179702195	C	T	SNP	CCDC141	ENST00000420890	human	ensembl	74_37	-1	known	missense	c.3751	p.V1251M	0.003	NULL	pfam_Ig_I-set,pfam_Spectrin_repeat,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CCDC141	HGNC	ENSG00000163492	tier1	-	-	38	0	0.00	17	4	19.05
CD1A	0	genome.wustl.edu	37	1	158225961	158225961	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	158225961	158225961	C	A	SNP	CD1A	ENST00000289429	human	ensembl	74_37	+1	known	missense	c.493	p.L165I	0.000	pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,pfam_MHC_I_a_a1/a2,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1A	HGNC	ENSG00000158477	tier1	-	-	56	0	0.00	28	16	36.36
CDC14B	0	genome.wustl.edu	37	9	99296415	99296415	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	9	99296415	99296415	G	T	SNP	CDC14B	ENST00000375241	human	ensembl	74_37	-1	known	missense	c.740	p.T247N	1.000	smart_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,smart_Tyr_Pase_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	CDC14B	HGNC	ENSG00000081377	tier1	-	-	57	0	0.00	13	30	69.77
CDCA8	0	genome.wustl.edu	37	1	38164611	38164611	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	38164611	38164611	C	T	SNP	CDCA8	ENST00000327331	human	ensembl	74_37	+1	known	missense	c.299	p.T100I	1.000	NULL	pfam_Cell_div_borealin,pfam_Borealin-like_N	-	no_errors	CDCA8	HGNC	ENSG00000134690	tier1	-	-	63	0	0.00	49	4	7.55
CDH11	0	genome.wustl.edu	37	16	65038654	65038654	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	65038654	65038654	T	C	SNP	CDH11	ENST00000268603	human	ensembl	74_37	-1	known	missense	c.119	p.E40G	1.000	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH11	HGNC	ENSG00000140937	tier1	-	-	71	0	0.00	27	5	15.62
CDH26	0	genome.wustl.edu	37	20	58564206	58564206	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	20	58564206	58564206	A	G	SNP	CDH26	ENST00000244047	human	ensembl	74_37	+1	known	missense	c.1271	p.D424G	0.837	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH26	HGNC	ENSG00000124215	tier1	-	-	110	0	0.00	69	4	5.48
CELF4	0	genome.wustl.edu	37	18	34850767	34850767	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	18	34850767	34850767	C	T	SNP	CELF4	ENST00000420428	human	ensembl	74_37	-1	known	missense	c.1063	p.E355K	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CELF4	HGNC	ENSG00000101489	tier1	-	-	84	0	0.00	27	12	30.77
CHD1	0	genome.wustl.edu	37	5	98204234	98204234	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	98204234	98204234	C	T	SNP	CHD1	ENST00000284049	human	ensembl	74_37	-1	known	missense	c.4213	p.E1405K	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Homeodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD1	HGNC	ENSG00000153922	tier1	-	-	87	0	0.00	28	9	23.68
CHKB-CPT1B	0	genome.wustl.edu	37	22	51016363	51016363	+	RNA	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	22	51016363	51016363	C	T	SNP	CHKB-CPT1B	ENST00000452668	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CHKB-CPT1B	HGNC	ENSG00000254413	tier1	-	-	43	0	0.00	24	5	17.24
CHUK	0	genome.wustl.edu	37	10	101953779	101953779	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	101953779	101953779	T	0	DEL	CHUK	ENST00000370397	human	ensembl	74_37	-1	known	frame_shift_del	c.1936	p.R646fs	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IKKbetaNEMObind,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	CHUK	HGNC	ENSG00000213341				109	0	0.00	67	7	9.46
CLDN8	0	genome.wustl.edu	37	21	31587980	31587980	+	Silent	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	21	31587980	31587980	G	T	SNP	CLDN8	ENST00000286809	human	ensembl	74_37	-1	known	silent	c.264	p.S88	0.000	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin,prints_Claudin8,prints_Claudin14	-	no_errors	CLDN8	HGNC	ENSG00000156284	tier1	-	-	103	0	0.00	50	4	7.41
CLPX	0	genome.wustl.edu	37	15	65471357	65471357	+	Silent	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	15	65471357	65471357	T	C	SNP	CLPX	ENST00000300107	human	ensembl	74_37	-1	known	silent	c.273	p.S91	0.994	NULL	pfam_ATPase_AAA-2,pfam_Clp_ATPase_C,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_Sigma_54_int,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_Clp_protease_ATP-bd_su_ClpX	-	no_errors	CLPX	HGNC	ENSG00000166855	tier1	-	-	97	0	0.00	62	4	6.06
CNR1	0	genome.wustl.edu	37	6	88854404	88854404	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	88854404	88854404	G	A	SNP	CNR1	ENST00000369499	human	ensembl	74_37	-1	known	missense	c.590	p.T197M	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pirsf_Canbinoid_rcpt_1,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pirsf_Canbinoid_rcpt_1,pfscan_GPCR_Rhodpsn_7TM,prints_Canbinoid_rcpt_1,prints_Cnbnoid_rcpt,prints_GPCR_Rhodpsn	-	no_errors	CNR1	HGNC	ENSG00000118432	tier1	-	-	37	0	0.00	15	5	25.00
COL27A1	0	genome.wustl.edu	37	9	116931688	116931688	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	9	116931688	116931688	C	T	SNP	COL27A1	ENST00000356083	human	ensembl	74_37	+1	known	missense	c.1853	p.T618M	0.991	NULL	pfam_Collagen,pfam_Fib_collagen_C,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL27A1	HGNC	ENSG00000196739	tier1	rs141872540	-	80	0	0.00	29	8	21.62
CPNE1	0	genome.wustl.edu	37	20	34215317	34215317	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	20	34215317	34215317	T	C	SNP	CPNE1	ENST00000317677	human	ensembl	74_37	-1	known	missense	c.1136	p.D379G	1.000	pfam_Copine,smart_VWF_A	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom	-	no_errors	CPNE1	HGNC	ENSG00000214078	tier1	-	-	53	0	0.00	57	4	6.56
CPSF2	0	genome.wustl.edu	37	14	92600367	92600367	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	14	92600367	92600367	G	T	SNP	CPSF2	ENST00000298875	human	ensembl	74_37	+1	known	missense	c.162	p.Q54H	1.000	pfam_Beta-lactamas-like,smart_Beta-lactamas-like	pfam_Beta_Casp,pfam_RMMBL,pfam_Beta-lactamas-like,smart_Beta-lactamas-like	-	no_errors	CPSF2	HGNC	ENSG00000165934				50	0	0.00	22	2	8.33
CPT1B	0	genome.wustl.edu	37	22	51009414	51009414	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	22	51009414	51009414	C	T	SNP	CPT1B	ENST00000312108	human	ensembl	74_37	-1	known	missense	c.1934	p.R645H	1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CPT1B	HGNC	ENSG00000205560	tier1	-	-	100	0	0.00	47	20	29.41
CSF1R	0	genome.wustl.edu	37	5	149433732	149433734	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	149433732	149433734	CTG	-	DEL	CSF1R	ENST00000286301	human	ensembl	74_37	-1	known	in_frame_del	c.2819_2817	p.S940in_frame_del	0.996:1.000:1.000	pirsf_Tyr_kinase_CSF1/PDGF_rcpt	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	CSF1R	HGNC	ENSG00000182578	tier1			38	0	0.00	10	2	16.67
CSMD2	0	genome.wustl.edu	37	1	34024948	34024948	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	34024948	34024948	G	T	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	missense	c.8506	p.Q2836K	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	tier1	-	-	107	0	0.00	39	12	23.08
CYB5D1	0	genome.wustl.edu	37	17	7762030	7762031	+	Frame_Shift_Ins	INS	-	-	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	7762030	7762031	-	T	INS	CYB5D1	ENST00000332439	human	ensembl	74_37	+1	known	frame_shift_ins	c.344_345	p.G117fs	1.000:1.000	NULL	pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pfscan_Cyt_B5-like_heme/steroid-bd	-	no_errors	CYB5D1	HGNC	ENSG00000182224	tier1			93	0	0.00	26	3	10.34
CYP2D6	0	genome.wustl.edu	37	22	42522969	42522969	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	22	42522969	42522969	G	A	SNP	CYP2D6	ENST00000360608	human	ensembl	74_37	-1	known	missense	c.1199	p.S400L	0.999	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2D-like,prints_Cyt_P450_B	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2D-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2D6	HGNC	ENSG00000100197	tier1	-	-	78	0	0.00	29	9	23.68
DAP3	0	genome.wustl.edu	37	1	155707999	155708000	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	155707999	155708000	-	CT	INS	DAP3	ENST00000343043	human	ensembl	74_37	+1	known	frame_shift_ins	c.1163_1164	p.L390fs	0.997:0.107	pfam_Ribosomal_S23/S29_mit,superfamily_P-loop_NTPase	pfam_Ribosomal_S23/S29_mit,superfamily_P-loop_NTPase,prints_Ribosomal_S29_mit	-	no_errors	DAP3	HGNC	ENSG00000132676	tier1			74	0	0.00	34	16	32.00
DDI1	0	genome.wustl.edu	37	11	103908556	103908556	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	11	103908556	103908556	C	T	SNP	DDI1	ENST00000302259	human	ensembl	74_37	+1	known	missense	c.1006	p.R336W	1.000	pfam_Peptidase_aspartic_DDI1-type,pfam_RVP_2,pfam_Pept_A2A_retrovirus_sg,superfamily_Peptidase_aspartic_dom	pfam_Peptidase_aspartic_DDI1-type,pfam_Ubiquitin_dom,pfam_RVP_2,pfam_Pept_A2A_retrovirus_sg,superfamily_Peptidase_aspartic_dom,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	DDI1	HGNC	ENSG00000170967				53	0	0.00	31	2	6.06
DDX11	0	genome.wustl.edu	37	12	31256769	31256769	+	Silent	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	31256769	31256769	G	A	SNP	DDX11	ENST00000407793	human	ensembl	74_37	+1	known	silent	c.2715	p.L905	0.259	NULL	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	DDX11	HGNC	ENSG00000013573	tier1	-	-	84	0	0.00	67	4	5.63
DEK	0	genome.wustl.edu	37	6	18264079	18264081	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	18264079	18264081	TCC	-	DEL	DEK	ENST00000397239	human	ensembl	74_37	-1	known	in_frame_del	c.140_138	p.E47in_frame_del	0.991:0.975:0.803	NULL	pfam_DEK_C,pfam_SAP_dom,smart_SAP_dom	-	no_errors	DEK	HGNC	ENSG00000124795	tier1			56	0	0.00	17	3	15.00
DGKI	0	genome.wustl.edu	37	7	137269972	137269972	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	7	137269972	137269972	C	A	SNP	DGKI	ENST00000288490	human	ensembl	74_37	-1	known	nonsense	c.1546	p.E516*	1.000	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	DGKI	HGNC	ENSG00000157680				134	0	0.00	76	4	5.00
DHX15	0	genome.wustl.edu	37	4	24543614	24543614	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	4	24543614	24543614	A	G	SNP	DHX15	ENST00000336812	human	ensembl	74_37	-1	known	missense	c.1367	p.L456P	0.999	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX15	HGNC	ENSG00000109606				98	0	0.00	43	3	6.52
DKK1	0	genome.wustl.edu	37	10	54074703	54074703	+	Silent	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	54074703	54074703	C	T	SNP	DKK1	ENST00000373970	human	ensembl	74_37	+1	known	silent	c.264	p.D88	0.966	pfam_Dickkopf_N	pfam_Dickkopf_N	-	no_errors	DKK1	HGNC	ENSG00000107984	tier1	-	-	110	0	0.00	58	4	6.45
DLX4	0	genome.wustl.edu	37	17	48050491	48050491	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	48050491	48050491	C	A	SNP	DLX4	ENST00000240306	human	ensembl	74_37	+1	known	missense	c.338	p.P113H	0.000	superfamily_Homeodomain-like	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,prints_HTH_motif,prints_Homeobox_metazoa,pfscan_Homeobox_dom	-	no_errors	DLX4	HGNC	ENSG00000108813	tier1	-	-	136	0	0.00	50	29	36.71
DNAI2	0	genome.wustl.edu	37	17	72278122	72278122	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	72278122	72278122	A	G	SNP	DNAI2	ENST00000311014	human	ensembl	74_37	+1	known	missense	c.166	p.S56G	0.902	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DNAI2	HGNC	ENSG00000171595	tier1	-	-	69	0	0.00	47	4	7.84
DNAJC11	0	genome.wustl.edu	37	1	6727803	6727804	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	6727803	6727804	TC	-	DEL	DNAJC11	ENST00000377577	human	ensembl	74_37	-1	known	frame_shift_del	c.344_343	p.E115fs	1.000:1.000	NULL	pfam_DnaJ-like_C11_C,pfam_DnaJ_domain,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC11	HGNC	ENSG00000007923	tier1			45	0	0.00	23	2	8.00
DNAJC17	0	genome.wustl.edu	37	15	41071496	41071496	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	15	41071496	41071496	T	G	SNP	DNAJC17	ENST00000220496	human	ensembl	74_37	-1	known	missense	c.220	p.K74Q	1.000	superfamily_DnaJ_domain,pfscan_DnaJ_domain	pfam_DnaJ_domain,pfam_RRM_dom,superfamily_DnaJ_domain,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJC17	HGNC	ENSG00000104129	tier1	-	-	64	0	0.00	23	11	32.35
DNM1P46	0	genome.wustl.edu	37	15	100340242	100340242	+	RNA	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	15	100340242	100340242	T	C	SNP	DNM1P46	ENST00000341853	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.950	-	-	-	no_errors	DNM1P46	HGNC	ENSG00000182397				109	0	0.00	50	5	9.09
DSCAML1	0	genome.wustl.edu	37	11	117329510	117329510	+	Silent	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	11	117329510	117329510	G	A	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	silent	c.3708	p.G1236	0.256	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103				55	0	0.00	23	2	8.00
DSCR4	0	genome.wustl.edu	37	21	39325305	39325305	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	21	39325305	39325305	C	A	SNP	DSCR4	ENST00000398948	human	ensembl	74_37	-1	putative	missense	c.234	p.R78S	0.000	NULL	NULL	-	no_errors	DSCR4	HGNC	ENSG00000184029	tier1	-	-	60	0	0.00	11	19	63.33
EEF2K	0	genome.wustl.edu	37	16	22262558	22262558	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	22262558	22262558	G	T	SNP	EEF2K	ENST00000263026	human	ensembl	74_37	+1	known	missense	c.533	p.R178L	1.000	pfam_MHCK_EF2_kinase,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pirsf_Elongation_factor_2_kinase,pfscan_MHCK_EF2_kinase	pfam_MHCK_EF2_kinase,pfam_Sel1-like,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pirsf_Elongation_factor_2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	EEF2K	HGNC	ENSG00000103319				77	0	0.00	39	3	7.14
EIF2AK1	0	genome.wustl.edu	37	7	6066405	6066406	+	Frame_Shift_Ins	INS	-	-	AT			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	7	6066405	6066406	-	AT	INS	EIF2AK1	ENST00000199389	human	ensembl	74_37	-1	known	frame_shift_ins	c.1718_1717	p.S573fs	1.000:0.998	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	EIF2AK1	HGNC	ENSG00000086232	tier1			63	0	0.00	35	23	39.66
ELMO2	0	genome.wustl.edu	37	20	45014797	45014797	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	20	45014797	45014797	T	C	SNP	ELMO2	ENST00000439931	human	ensembl	74_37	-1	known	missense	c.643	p.I215V	1.000	pfam_DUF3361,superfamily_ARM-type_fold	pfam_DUF3361,pfam_Engulfment_cell_motility_ELMO,superfamily_ARM-type_fold	-	no_errors	ELMO2	HGNC	ENSG00000062598	tier1	rs113022678	-	48	0	0.00	18	11	37.93
ENPP5	0	genome.wustl.edu	37	6	46135853	46135853	+	Silent	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	46135853	46135853	G	T	SNP	ENPP5	ENST00000230565	human	ensembl	74_37	-1	known	silent	c.147	p.P49	0.994	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	ENPP5	HGNC	ENSG00000112796	tier1	-	-	142	0	0.00	62	4	5.97
ENSG00000224631	0	genome.wustl.edu	37	16	61089511	61089511	+	RNA	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	61089511	61089511	C	T	SNP	ENSG00000224631	ENST00000591758	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.995	-	-	-	no_errors	RP11-51O6.1	Clone_based_vega_gene	ENSG00000224631	tier1	-	-	41	0	0.00	20	13	39.39
ENSG00000231412	0	genome.wustl.edu	37	19	43835579	43835579	+	RNA	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	43835579	43835579	T	C	SNP	ENSG00000231412	ENST00000595748	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTC-490G23.2	Clone_based_vega_gene	ENSG00000231412	tier1	-	-	31	0	0.00	19	4	17.39
ENSG00000234277	0	genome.wustl.edu	37	1	227618722	227618722	+	RNA	DEL	A	A	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	227618722	227618722	A	-	DEL	ENSG00000234277	ENST00000445817	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.163	-	-	-	no_errors	CTD-2090I13.1	Clone_based_vega_gene	ENSG00000234277	tier1			18	0	0.00	19	4	17.39
ENSG00000243008	0	genome.wustl.edu	37	13	25155856	25155856	+	RNA	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	13	25155856	25155856	C	A	SNP	ENSG00000243008	ENST00000453498	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.596	-	-	-	no_errors	RP11-556N21.1	Clone_based_vega_gene	ENSG00000243008	tier1	-	-	195	0	0.00	82	11	11.70
ENSG00000255487	0	genome.wustl.edu	37	8	38134040	38134040	+	RNA	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	8	38134040	38134040	T	C	SNP	ENSG00000255487	ENST00000529325	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-513D5.5	Clone_based_vega_gene	ENSG00000255487	tier1	-	-	34	0	0.00	30	14	31.82
ERCC6	0	genome.wustl.edu	37	10	50678883	50678883	+	Silent	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	50678883	50678883	T	C	SNP	ERCC6	ENST00000355832	human	ensembl	74_37	-1	known	silent	c.3123	p.Q1041	0.000	NULL	pfam_SNF2_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	ERCC6	HGNC	ENSG00000225830	tier1	-	-	105	0	0.00	70	4	5.41
ESPNP	0	genome.wustl.edu	37	1	17026043	17026044	+	RNA	INS	-	-	GCA			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	17026043	17026044	0	GCA	INS	ESPNP	ENST00000492551	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.970:0.965	-	-	-	no_errors	ESPNP	HGNC	ENSG00000268869				17	0	0.00	7	2	22.22
EXOC6B	0	genome.wustl.edu	37	2	72945384	72945384	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	72945384	72945384	G	T	SNP	EXOC6B	ENST00000272427	human	ensembl	74_37	-1	known	missense	c.517	p.Q173K	1.000	pirsf_Sec15	pfam_Sec15,pirsf_Sec15	-	no_errors	EXOC6B	HGNC	ENSG00000144036	tier1	-	-	69	0	0.00	57	4	6.56
FAM135A	0	genome.wustl.edu	37	6	71186910	71186910	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	71186910	71186910	G	C	SNP	FAM135A	ENST00000418814	human	ensembl	74_37	+1	known	missense	c.417	p.K139N	1.000	pfam_DUF3657	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like,pfam_LACT/PDAT_acylTrfase	-	no_errors	FAM135A	HGNC	ENSG00000082269	tier1	-	-	81	0	0.00	33	13	28.26
FBXW5	0	genome.wustl.edu	37	9	139835770	139835770	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	9	139835770	139835770	G	A	SNP	FBXW5	ENST00000325285	human	ensembl	74_37	-1	known	missense	c.1390	p.R464C	1.000	superfamily_Quinoprot_gluc/sorb_DH,smart_WD40_repeat	pfam_WD40_repeat,pfam_F-box_dom,superfamily_Quinoprot_gluc/sorb_DH,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	FBXW5	HGNC	ENSG00000159069	tier1	-	-	82	0	0.00	20	15	42.86
FBXW7	0	genome.wustl.edu	37	4	153253853	153253853	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	4	153253853	153253853	A	G	SNP	FBXW7	ENST00000281708	human	ensembl	74_37	-1	known	missense	c.880	p.S294P	1.000	pfam_F-box_dom,superfamily_F-box_dom,smart_F-box_dom,pfscan_F-box_dom	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW7	HGNC	ENSG00000109670				75	0	0.00	37	2	5.13
FGFR2	0	genome.wustl.edu	37	10	123245035	123245035	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	123245035	123245035	C	T	SNP	FGFR2	ENST00000457416	human	ensembl	74_37	-1	known	missense	c.2072	p.G691E	1.000	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_FGF_rcpt_fam,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	FGFR2	HGNC	ENSG00000066468				94	0	0.00	56	3	5.08
FLG	0	genome.wustl.edu	37	1	152281918	152281918	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	152281918	152281918	C	T	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.5444	p.G1815E	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	212	0	0.00	133	10	6.94
FLYWCH2	0	genome.wustl.edu	37	16	2949264	2949264	+	RNA	DEL	C	C	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	2949264	2949264	C	-	DEL	FLYWCH2	ENST00000572786	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	FLYWCH2	HGNC	ENSG00000162076	tier1			46	0	0.00	19	3	13.64
FPR1	0	genome.wustl.edu	37	19	52249357	52249357	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	52249357	52249357	G	C	SNP	FPR1	ENST00000304748	human	ensembl	74_37	-1	known	missense	c.891	p.N297K	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Formyl_pep_rcpt,prints_GPCR_Rhodpsn,prints_Anphylx_rcpt	-	no_errors	FPR1	HGNC	ENSG00000171051	tier1	-	-	65	0	0.00	36	5	12.20
FRAS1	0	genome.wustl.edu	37	4	79343066	79343066	+	Silent	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	4	79343066	79343066	G	T	SNP	FRAS1	ENST00000264895	human	ensembl	74_37	+1	known	silent	c.4590	p.T1530	0.010	NULL	pfam_Calx_beta,pfam_VWF_C,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_VWC_out,smart_VWF_C,smart_Furin_repeat,smart_EG-like_dom,smart_Calx_beta,pfscan_VWF_C	-	no_errors	FRAS1	HGNC	ENSG00000138759				60	0	0.00	28	2	6.67
GABPA	0	genome.wustl.edu	37	21	27117646	27117646	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	21	27117646	27117646	T	A	SNP	GABPA	ENST00000354828	human	ensembl	74_37	+1	known	missense	c.203	p.I68N	1.000	pfam_GABP_asu_N,pirsf_TF_GA-bd_asu	pfam_GABP_asu_N,pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pirsf_TF_GA-bd_asu,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	GABPA	HGNC	ENSG00000154727				81	0	0.00	32	4	11.11
GALNT15	0	genome.wustl.edu	37	3	16237381	16237381	+	Silent	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	3	16237381	16237381	G	T	SNP	GALNT15	ENST00000339732	human	ensembl	74_37	+1	known	silent	c.654	p.V218	0.180	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT15	HGNC	ENSG00000131386	tier1	-	-	62	0	0.00	22	3	12.00
GAS1	0	genome.wustl.edu	37	9	89561648	89561648	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	9	89561648	89561648	G	T	SNP	GAS1	ENST00000298743	human	ensembl	74_37	-1	known	missense	c.47	p.T16K	0.140	NULL	pfam_GDNF/GAS1,smart_GDNF/GAS1	-	no_errors	GAS1	HGNC	ENSG00000180447	tier1	-	-	54	0	0.00	36	6	14.29
GLRB	0	genome.wustl.edu	37	4	158065089	158065089	+	Silent	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	4	158065089	158065089	G	A	SNP	GLRB	ENST00000264428	human	ensembl	74_37	+1	known	silent	c.882	p.A294	0.101	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Glycine_rcpt_B,prints_GABAA_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GLRB	HGNC	ENSG00000109738				81	0	0.00	35	2	5.41
GNPAT	0	genome.wustl.edu	37	1	231403505	231403505	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	231403505	231403505	G	C	SNP	GNPAT	ENST00000366647	human	ensembl	74_37	+1	known	missense	c.1135	p.E379Q	1.000	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	GNPAT	HGNC	ENSG00000116906	tier1	-	-	82	0	0.00	39	33	45.83
GNPTAB	0	genome.wustl.edu	37	12	102183823	102183823	+	Silent	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	102183823	102183823	G	A	SNP	GNPTAB	ENST00000299314	human	ensembl	74_37	-1	known	silent	c.216	p.P72	1.000	NULL	pfam_DMAP1-bd,pfam_Notch_dom,pfam_DUF3184,superfamily_Notch_dom,smart_Notch_dom,pfscan_EF_hand_dom,pfscan_Notch_dom	-	no_errors	GNPTAB	HGNC	ENSG00000111670				90	0	0.00	44	4	8.33
GOLGA6D	0	genome.wustl.edu	37	15	75586142	75586142	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	15	75586142	75586142	G	A	SNP	GOLGA6D	ENST00000434739	human	ensembl	74_37	+1	known	missense	c.1666	p.V556I	1.000	NULL	NULL	-	no_errors	GOLGA6D	HGNC	ENSG00000140478	tier1	-	-	233	0	0.00	128	21	14.09
GP2	0	genome.wustl.edu	37	16	20326021	20326021	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	20326021	20326021	C	T	SNP	GP2	ENST00000381362	human	ensembl	74_37	-1	known	missense	c.1513	p.A505T	0.002	NULL	pfam_ZP_dom,smart_ZP_dom,pfscan_ZP_dom,prints_ZP_dom	-	no_errors	GP2	HGNC	ENSG00000169347				117	0	0.00	65	4	5.80
GPR182	0	genome.wustl.edu	37	12	57390113	57390113	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	57390113	57390113	G	A	SNP	GPR182	ENST00000300098	human	ensembl	74_37	+1	known	missense	c.1120	p.A374T	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_G10D_rcpt,prints_GPCR_Rhodpsn,prints_ATII_rcpt	-	no_errors	GPR182	HGNC	ENSG00000166856	tier1	-	-	68	0	0.00	26	21	44.68
GPR75-ASB3	0	genome.wustl.edu	37	2	53897541	53897541	+	RNA	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	53897541	53897541	C	T	SNP	GPR75-ASB3	ENST00000482829	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GPR75-ASB3	HGNC	ENSG00000115239	tier1	-	-	170	0	0.00	119	24	16.78
GPR98	0	genome.wustl.edu	37	5	89975401	89975401	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	89975401	89975401	G	T	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.5479	p.G1827C	1.000	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199				134	0	0.00	71	4	5.33
GRIA1	0	genome.wustl.edu	37	5	152870474	152870474	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	152870474	152870474	G	A	SNP	GRIA1	ENST00000285900	human	ensembl	74_37	+1	known	missense	c.26	p.C9Y	1.000	NULL	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA1	HGNC	ENSG00000155511	tier1	-	-	91	0	0.00	50	5	9.09
GRM2	0	genome.wustl.edu	37	3	51746593	51746593	+	Silent	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	3	51746593	51746593	G	T	SNP	GRM2	ENST00000395052	human	ensembl	74_37	+1	known	silent	c.555	p.V185	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM2	HGNC	ENSG00000164082	tier1	-	-	104	0	0.00	42	4	8.70
GTF3C5	0	genome.wustl.edu	37	9	135917627	135917627	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	9	135917627	135917627	G	A	SNP	GTF3C5	ENST00000372108	human	ensembl	74_37	+1	known	missense	c.307	p.A103T	0.002	pfam_TF_IIIC_su-5	pfam_TF_IIIC_su-5	-	no_errors	GTF3C5	HGNC	ENSG00000148308				49	0	0.00	31	2	6.06
HABP2	0	genome.wustl.edu	37	10	115334094	115334094	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	115334094	115334094	G	T	SNP	HABP2	ENST00000351270	human	ensembl	74_37	+1	known	missense	c.153	p.Q51H	0.001	NULL	pfam_Peptidase_S1,pfam_Kringle,pfam_EG-like_dom,superfamily_Trypsin-like_Pept_dom,superfamily_Kringle-like,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Kringle,smart_Peptidase_S1,pfscan_EG-like_dom,pfscan_Kringle,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HABP2	HGNC	ENSG00000148702	tier1	-	-	121	0	0.00	61	4	6.15
HCAR3	0	genome.wustl.edu	37	12	123200854	123200854	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	123200854	123200854	G	A	SNP	HCAR3	ENST00000528880	human	ensembl	74_37	-1	known	missense	c.431	p.A144V	0.071	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	HCAR3	HGNC	ENSG00000255398	tier1	-	-	76	0	0.00	62	5	7.46
HDHD3	0	genome.wustl.edu	37	9	116136524	116136524	+	Silent	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	9	116136524	116136524	C	T	SNP	HDHD3	ENST00000238379	human	ensembl	74_37	-1	known	silent	c.111	p.G37	0.944	pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_HAD-SF_hydro_IA_REG-2-like	pfam_HAD-like_dom,superfamily_HAD-like_dom,prints_HAD-SF_hydro_IA,tigrfam_HAD-SF_hydro_IA_REG-2-like,tigrfam_HAD-SF_hydro_IA	-	no_errors	HDHD3	HGNC	ENSG00000119431	tier1	-	-	74	0	0.00	39	4	9.30
HERC1	0	genome.wustl.edu	37	15	63966633	63966633	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	15	63966633	63966633	C	T	SNP	HERC1	ENST00000443617	human	ensembl	74_37	-1	known	missense	c.7754	p.G2585E	0.999	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC	ENSG00000103657	tier1	-	-	69	0	0.00	41	20	32.79
HGSNAT	0	genome.wustl.edu	37	8	43052113	43052113	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	8	43052113	43052113	A	T	SNP	HGSNAT	ENST00000458501	human	ensembl	74_37	+1	known	missense	c.1571	p.Y524F	1.000	NULL	pfam_DUF1624	-	no_errors	HGSNAT	HGNC	ENSG00000165102	tier1	-	-	130	0	0.00	69	4	5.48
HIST1H2BC	0	genome.wustl.edu	37	6	26124066	26124066	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	26124066	26124066	G	A	SNP	HIST1H2BC	ENST00000314332	human	ensembl	74_37	-1	known	nonsense	c.67	p.Q23*	0.999	superfamily_Histone-fold	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2B,prints_Histone_H2B	-	no_errors	HIST1H2BC	HGNC	ENSG00000180596				113	0	0.00	46	3	6.12
HIST1H4B	0	genome.wustl.edu	37	6	26027418	26027418	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	26027418	26027418	T	-	DEL	HIST1H4B	ENST00000377364	human	ensembl	74_37	-1	known	frame_shift_del	c.63	p.V22fs	1.000	superfamily_Histone-fold,smart_Histone_H4,prints_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4B	HGNC	ENSG00000124529	tier1			95	0	0.00	35	2	5.41
HM13	0	genome.wustl.edu	37	20	30154016	30154016	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	20	30154016	30154016	G	A	SNP	HM13	ENST00000398174	human	ensembl	74_37	+1	known	missense	c.952	p.A318T	1.000	pfam_Peptidase_A22B_SPP,smart_Preselin/SPP	pfam_Peptidase_A22B_SPP,smart_Preselin/SPP	-	no_errors	HM13	HGNC	ENSG00000101294	tier1	-	-	89	0	0.00	38	22	36.07
HMCN1	0	genome.wustl.edu	37	1	186113436	186113436	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	186113436	186113436	G	T	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	nonsense	c.14056	p.E4686*	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	99	0	0.00	73	10	12.05
HRNR	0	genome.wustl.edu	37	1	152185648	152185648	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	152185648	152185648	A	C	SNP	HRNR	ENST00000368801	human	ensembl	74_37	-1	known	missense	c.8457	p.H2819Q	0.003	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	HRNR	HGNC	ENSG00000197915				117	0	0.00	77	5	6.10
HSPA9	0	genome.wustl.edu	37	5	137892472	137892472	+	Silent	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	137892472	137892472	A	G	SNP	HSPA9	ENST00000297185	human	ensembl	74_37	-1	known	silent	c.1812	p.P604	1.000	pfam_Hsp_70_fam,tigrfam_Chaperone_DnaK	pfam_Hsp_70_fam,pfam_MreB_Mrl,pfam_Carb_kinase_FGGY_C,prints_Hsp_70_fam,tigrfam_Chaperone_DnaK	-	no_errors	HSPA9	HGNC	ENSG00000113013	tier1	-	-	87	0	0.00	32	4	11.11
HTR3C	0	genome.wustl.edu	37	3	183776319	183776319	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	3	183776319	183776319	A	C	SNP	HTR3C	ENST00000318351	human	ensembl	74_37	+1	known	missense	c.664	p.K222Q	0.876	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Neur_channel	-	no_errors	HTR3C	HGNC	ENSG00000178084	tier1	-	-	104	0	0.00	89	28	23.93
HTRA1	0	genome.wustl.edu	37	10	124249128	124249128	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	124249128	124249128	A	G	SNP	HTRA1	ENST00000368984	human	ensembl	74_37	+1	known	missense	c.763	p.K255E	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom	pfam_Peptidase_S1,pfam_PDZ,pfam_Kazal_dom,pfam_IGFBP-like,superfamily_Trypsin-like_Pept_dom,superfamily_PDZ,smart_IGFBP-like,smart_Kazal_dom,smart_PDZ,pfscan_PDZ,prints_Peptidase_S1C	-	no_errors	HTRA1	HGNC	ENSG00000166033	tier1	-	-	97	0	0.00	27	16	37.21
IFFO1	0	genome.wustl.edu	37	12	6660125	6660125	+	Silent	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	6660125	6660125	A	G	SNP	IFFO1	ENST00000356896	human	ensembl	74_37	-1	known	silent	c.816	p.R272	0.989	NULL	NULL	-	no_errors	IFFO1	HGNC	ENSG00000010295				49	0	0.00	37	3	7.50
INF2	0	genome.wustl.edu	37	14	105172386	105172386	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	14	105172386	105172386	C	T	SNP	INF2	ENST00000392634	human	ensembl	74_37	+1	known	missense	c.716	p.A239V	0.037	pfam_FH3_dom,superfamily_ARM-type_fold	pfam_FH2_Formin,pfam_FH3_dom,pfam_GTPase-bd,pfam_WH2_dom,superfamily_ARM-type_fold,smart_FH2_Formin,pfscan_WH2_dom	-	no_errors	INF2	HGNC	ENSG00000203485				119	0	0.00	56	5	8.20
INHBB	0	genome.wustl.edu	37	2	121106886	121106886	+	Silent	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	121106886	121106886	C	T	SNP	INHBB	ENST00000295228	human	ensembl	74_37	+1	known	silent	c.660	p.D220	1.000	pfam_TGF-b_N	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,prints_Inhibin_betaB,prints_Inhibin_asu	-	no_errors	INHBB	HGNC	ENSG00000163083	tier1	-	-	69	0	0.00	39	16	29.09
IPO5	0	genome.wustl.edu	37	13	98670884	98670884	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	13	98670884	98670884	T	A	SNP	IPO5	ENST00000261574	human	ensembl	74_37	+1	known	missense	c.2816	p.V939D	1.000	pfam_HEAT,superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,pfscan_Importin-beta_N	-	no_errors	IPO5	HGNC	ENSG00000065150	tier1	-	-	126	0	0.00	65	4	5.80
IQCA1	0	genome.wustl.edu	37	2	237272501	237272501	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	237272501	237272501	G	T	SNP	IQCA1	ENST00000409907	human	ensembl	74_37	-1	known	missense	c.1791	p.F597L	1.000	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,pfscan_IQ_motif_EF-hand-BS	-	no_errors	IQCA1	HGNC	ENSG00000132321	tier1	-	-	115	0	0.00	56	4	6.67
ITGAV	0	genome.wustl.edu	37	2	187529332	187529332	+	Silent	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	187529332	187529332	G	T	SNP	ITGAV	ENST00000261023	human	ensembl	74_37	+1	known	silent	c.2037	p.L679	0.001	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGAV	HGNC	ENSG00000138448				112	0	0.00	56	3	5.08
JPH3	0	genome.wustl.edu	37	16	87717865	87717865	+	Silent	SNP	G	G	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	87717865	87717865	G	C	SNP	JPH3	ENST00000284262	human	ensembl	74_37	+1	known	silent	c.1278	p.R426	0.998	pirsf_Junctophilin	pirsf_Junctophilin,pfam_MORN,smart_MORN	-	no_errors	JPH3	HGNC	ENSG00000154118				98	0	0.00	28	2	6.67
KARS	0	genome.wustl.edu	37	16	75665431	75665431	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	75665431	75665431	C	T	SNP	KARS	ENST00000319410	human	ensembl	74_37	-1	known	missense	c.1219	p.E407K	1.000	pfam_aa-tRNA-synt_II,pfscan_aa-tRNA-synth_II,tigrfam_Lys-tRNA-ligase_II	pfam_aa-tRNA-synt_II,pfam_NA-bd_OB_tRNA,superfamily_NA-bd_OB-fold,pfscan_aa-tRNA-synth_II,prints_Lys-tRNA-synth_II_C,prints_Asp/Asn-tRNA-synth_IIb,tigrfam_Lys-tRNA-ligase_II	-	no_errors	KARS	HGNC	ENSG00000065427				39	0	0.00	25	3	10.71
KCTD7	0	genome.wustl.edu	37	7	66236988	66236988	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	7	66236988	66236988	C	G	SNP	KCTD7	ENST00000380828	human	ensembl	74_37	+1	known	missense	c.102	p.F34L	1.000	pfam_Znf_A20,smart_Znf_A20,pfscan_Znf_A20	pfam_VPS9,pfam_Znf_A20,smart_Znf_A20,smart_VPS9_subgr,pfscan_VPS9,pfscan_Znf_A20	-	no_errors	KCTD7	HGNC	ENSG00000243335	tier1	-	-	125	0	0.00	86	8	8.51
KDM1B	0	genome.wustl.edu	37	6	18188156	18188156	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	18188156	18188156	G	A	SNP	KDM1B	ENST00000388870	human	ensembl	74_37	+1	known	missense	c.707	p.S236N	1.000	NULL	pfam_Amino_oxidase,pfam_Znf_CW,pfam_FAD-dep_OxRdtase,pfam_Pyr_nucl-diS_OxRdtase_FAD/NAD,pfam_SWIRM,pfam_Pyr_OxRdtase_NAD-bd_dom,pfam_mOase_FAD-bd,pfam_CHP00275_HI0933-like,pfam_FAD_bind_dom,superfamily_Homeodomain-like,pfscan_SWIRM,pfscan_Znf_CW	-	no_errors	KDM1B	HGNC	ENSG00000165097	tier1	-	-	69	0	0.00	42	5	10.64
KIAA1598	0	genome.wustl.edu	37	10	118708448	118708448	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	118708448	118708448	C	T	SNP	KIAA1598	ENST00000392903	human	ensembl	74_37	-1	known	missense	c.595	p.V199I	1.000	NULL	superfamily_Adenylate_cyclase-assoc_CAP_N	-	no_errors	KIAA1598	HGNC	ENSG00000187164	tier1	-	-	87	0	0.00	48	6	11.11
KLHL18	0	genome.wustl.edu	37	3	47384290	47384290	+	Silent	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	3	47384290	47384290	C	T	SNP	KLHL18	ENST00000232766	human	ensembl	74_37	+1	known	silent	c.1308	p.G436	0.966	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_Kelch_2,pfam_BACK,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL18	HGNC	ENSG00000114648	tier1	rs147202777	-	101	0	0.00	39	4	9.30
KLHL3	0	genome.wustl.edu	37	5	137013137	137013137	+	RNA	DEL	A	A	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	137013137	137013137	A	-	DEL	KLHL3	ENST00000510529	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	KLHL3	HGNC	ENSG00000146021	tier1			34	0	0.00	22	3	12.00
KLRD1	0	genome.wustl.edu	37	12	10464159	10464159	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	10464159	10464159	A	T	SNP	KLRD1	ENST00000381908	human	ensembl	74_37	+1	known	missense	c.260	p.H87L	0.000	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	KLRD1	HGNC	ENSG00000134539	tier1	-	-	93	0	0.00	35	18	33.96
KMT2D	0	genome.wustl.edu	37	12	49432030	49432030	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	49432030	49432030	G	-	DEL	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	frame_shift_del	c.9109	p.H3037fs	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1			32	0	0.00	14	8	36.36
KRTAP4-9	0	genome.wustl.edu	37	17	39261661	39261661	+	Silent	SNP	C	C	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	39261661	39261661	C	G	SNP	KRTAP4-9	ENST00000391415	human	ensembl	74_37	+1	known	silent	c.21	p.G7	0.972	pfam_Keratin-assoc	pfam_Keratin-assoc	-	no_errors	KRTAP4-9	HGNC	ENSG00000212722	tier1	-	-	366	0	0.00	132	107	44.77
KRTAP5-9	0	genome.wustl.edu	37	11	71260187	71260187	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	11	71260187	71260187	C	G	SNP	KRTAP5-9	ENST00000528743	human	ensembl	74_37	+1	known	missense	c.484	p.P162A	0.349	NULL	NULL	-	no_errors	KRTAP5-9	HGNC	ENSG00000254997	tier1	-	-	144	0	0.00	100	13	11.50
LAMTOR1	0	genome.wustl.edu	37	11	71810295	71810295	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	11	71810295	71810295	T	C	SNP	LAMTOR1	ENST00000278671	human	ensembl	74_37	-1	known	missense	c.50	p.E17G	1.000	NULL	NULL	-	no_errors	LAMTOR1	HGNC	ENSG00000149357	tier1	-	-	56	0	0.00	28	19	40.43
LDB3	0	genome.wustl.edu	37	10	88469744	88469744	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	88469744	88469744	G	A	SNP	LDB3	ENST00000429277	human	ensembl	74_37	+1	known	missense	c.1183	p.A395T	0.668	NULL	pfam_Znf_LIM,pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_ZASP,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	LDB3	HGNC	ENSG00000122367	tier1	-	-	104	0	0.00	27	24	46.15
LMO4	0	genome.wustl.edu	37	1	87810542	87810542	+	RNA	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	87810542	87810542	A	G	SNP	LMO4	ENST00000489303	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.972	-	-	-	no_errors	LMO4	HGNC	ENSG00000143013	tier1	-	-	71	0	0.00	16	14	46.67
LOC100134259	0	genome.wustl.edu	37	2	47083042	47083042	+	RNA	DEL	A	A	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	47083042	47083042	A	-	DEL	LOC100134259	ENST00000495449	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	AC016722.2	Clone_based_vega_gene	ENSG00000239332	tier1			56	0	0.00	31	12	27.91
LOC101927345	0	genome.wustl.edu	37	1	143378099	143378099	+	RNA	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	143378099	143378099	T	C	SNP	LOC101927345	ENST00000428624	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.159	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261	tier1	-	-	176	0	0.00	81	5	5.81
LOC284023	0	genome.wustl.edu	37	17	7818793	7818793	+	RNA	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	7818793	7818793	G	T	SNP	LOC284023	ENST00000324348	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.027	-	-	-	no_errors	AC025335.1	Clone_based_vega_gene	ENSG00000179859	tier1	-	-	56	0	0.00	6	9	60.00
LRRC9	0	genome.wustl.edu	37	14	60494606	60494606	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	14	60494606	60494606	T	A	SNP	LRRC9	ENST00000445360	human	ensembl	74_37	+1	novel	missense	c.3708	p.N1236K	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC9	HGNC	ENSG00000131951	tier1	-	-	90	0	0.00	45	15	25.00
LRRFIP2	0	genome.wustl.edu	37	3	37154454	37154454	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	3	37154454	37154454	G	T	SNP	LRRFIP2	ENST00000336686	human	ensembl	74_37	-1	known	missense	c.390	p.H130Q	0.965	NULL	pfam_Leu-rich_rep_flightless-int_pr,superfamily_bHLH_dom,superfamily_Prefoldin	-	no_errors	LRRFIP2	HGNC	ENSG00000093167				52	0	0.00	22	3	12.00
LRRTM1	0	genome.wustl.edu	37	2	80530054	80530054	+	Silent	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	80530054	80530054	G	T	SNP	LRRTM1	ENST00000295057	human	ensembl	74_37	-1	known	silent	c.891	p.P297	0.926	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM1	HGNC	ENSG00000162951				40	0	0.00	29	2	6.45
LY75	0	genome.wustl.edu	37	2	160661610	160661610	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	160661610	160661610	C	T	SNP	LY75	ENST00000263636	human	ensembl	74_37	-1	known	missense	c.5114	p.R1705Q	1.000	NULL	pfam_C-type_lectin,pfam_FN_type2_col-bd,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin	-	no_errors	LY75	HGNC	ENSG00000054219				70	0	0.00	30	2	6.25
MAP2	0	genome.wustl.edu	37	2	210560091	210560091	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	210560091	210560091	G	T	SNP	MAP2	ENST00000360351	human	ensembl	74_37	+1	known	missense	c.3197	p.R1066M	0.002	pfam_MAP2_projctn	pfam_MAP2_projctn,pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC	ENSG00000078018				18	0	0.00	12	2	14.29
MAP2K4	0	genome.wustl.edu	37	17	11935587	11935587	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	11935587	11935587	T	A	SNP	MAP2K4	ENST00000415385	human	ensembl	74_37	+1	known	missense	c.120	p.F40L	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP2K4	HGNC	ENSG00000065559	tier1	-	-	63	0	0.00	29	3	9.38
MAP3K12	0	genome.wustl.edu	37	12	53878119	53878119	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	53878119	53878119	G	C	SNP	MAP3K12	ENST00000267079	human	ensembl	74_37	-1	known	missense	c.1071	p.F357L	1.000	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_MAP3K12_MAP3K13,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	MAP3K12	HGNC	ENSG00000139625	tier1	-	-	79	0	0.00	49	7	12.50
MAP4	0	genome.wustl.edu	37	3	47969785	47969785	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	3	47969785	47969785	G	T	SNP	MAP4	ENST00000360240	human	ensembl	74_37	-1	known	missense	c.348	p.S116R	0.991	NULL	pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP4	HGNC	ENSG00000047849	tier1	-	-	181	0	0.00	73	4	5.19
MAP7D2	0	genome.wustl.edu	37	X	20030525	20030525	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	X	20030525	20030525	C	G	SNP	MAP7D2	ENST00000379643	human	ensembl	74_37	-1	known	missense	c.2014	p.D672H	0.991	NULL	pfam_MAP7	-	no_errors	MAP7D2	HGNC	ENSG00000184368	tier1	-	-	58	0	0.00	39	5	11.36
MAST3	0	genome.wustl.edu	37	19	18255452	18255452	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	18255452	18255452	C	T	SNP	MAST3	ENST00000262811	human	ensembl	74_37	+1	known	missense	c.2674	p.R892C	0.996	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST3	HGNC	ENSG00000099308				69	0	0.00	45	3	6.25
MCIDAS	0	genome.wustl.edu	37	5	54516532	54516532	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	54516532	54516532	C	A	SNP	MCIDAS	ENST00000513312	human	ensembl	74_37	-1	novel	missense	c.820	p.G274W	0.145	NULL	pfam_Geminin_fam	-	no_errors	MCIDAS	HGNC	ENSG00000234602	tier1	-	-	84	0	0.00	32	4	11.11
MED13L	0	genome.wustl.edu	37	12	116446894	116446894	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	116446894	116446894	G	T	SNP	MED13L	ENST00000281928	human	ensembl	74_37	-1	known	missense	c.1324	p.P442T	1.000	NULL	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13L	HGNC	ENSG00000123066	tier1	-	-	92	0	0.00	67	4	5.63
MRPL22	0	genome.wustl.edu	37	5	154330416	154330416	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	154330416	154330416	C	A	SNP	MRPL22	ENST00000523037	human	ensembl	74_37	+1	known	missense	c.113	p.S38Y	0.916	NULL	pfam_Ribosomal_L22,superfamily_Ribosomal_L22	-	no_errors	MRPL22	HGNC	ENSG00000082515	tier1	-	-	102	0	0.00	17	24	57.14
MS4A10	0	genome.wustl.edu	37	11	60559758	60559758	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	11	60559758	60559758	G	T	SNP	MS4A10	ENST00000308287	human	ensembl	74_37	+1	known	missense	c.324	p.L108F	0.004	pfam_CD20-like	pfam_CD20-like	-	no_errors	MS4A10	HGNC	ENSG00000172689				82	0	0.00	34	2	5.56
MT-RNR1	0	genome.wustl.edu	37	MT	1574	1574	+	RNA	SNP	G	G	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	MT	1574	1574	G	C	SNP	MT-RNR1	ENST00000389680	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR1	HGNC	ENSG00000211459	tier1	-	-	19	0	0.00	1	17	94.44
MT-TM	0	genome.wustl.edu	37	MT	4403	4403	+	RNA	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	MT	4403	4403	G	A	SNP	MT-TM	ENST00000387377	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-TM	HGNC	ENSG00000210112				10	0	0.00	9	8	47.06
MTMR12	0	genome.wustl.edu	37	5	32230000	32230000	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	32230000	32230000	G	T	SNP	MTMR12	ENST00000382142	human	ensembl	74_37	-1	known	missense	c.2128	p.L710M	0.114	NULL	pfam_Myotubularin_assoc	-	no_errors	MTMR12	HGNC	ENSG00000150712				54	0	0.00	59	4	6.35
MTUS2	0	genome.wustl.edu	37	13	29600336	29600336	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	13	29600336	29600336	G	T	SNP	MTUS2	ENST00000431530	human	ensembl	74_37	+1	known	nonsense	c.1531	p.E511*	0.000	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938				103	0	0.00	33	2	5.71
MUC16	0	genome.wustl.edu	37	19	9067553	9067553	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	9067553	9067553	G	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.19893	p.D6631E	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	47	0	0.00	13	21	61.76
MUC16	0	genome.wustl.edu	37	19	9082704	9082704	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	9082704	9082704	C	G	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.9111	p.E3037D	0.024	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143				93	0	0.00	37	2	5.13
MYB	0	genome.wustl.edu	37	6	135511466	135511466	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	135511466	135511466	G	A	SNP	MYB	ENST00000341911	human	ensembl	74_37	+1	known	missense	c.508	p.A170T	1.000	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	pfam_C-myb_C,pfam_SANT/Myb,pfam_Tscrpt_reg_Wos2-domain,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	MYB	HGNC	ENSG00000118513				83	0	0.00	33	3	8.33
MYCN	0	genome.wustl.edu	37	2	16085955	16085955	+	Silent	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	16085955	16085955	G	A	SNP	MYCN	ENST00000281043	human	ensembl	74_37	+1	known	silent	c.1131	p.S377	0.988	superfamily_bHLH_dom,prints_Tscrpt_reg_Myc	pfam_Tscrpt_reg_Myc_N,pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom,prints_Tscrpt_reg_Myc	-	no_errors	MYCN	HGNC	ENSG00000134323				33	0	0.00	32	3	8.57
MYO15A	0	genome.wustl.edu	37	17	18058015	18058015	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	18058015	18058015	G	A	SNP	MYO15A	ENST00000205890	human	ensembl	74_37	+1	known	missense	c.8170	p.E2724K	1.000	NULL	pfam_Myosin_head_motor_dom,pfam_MyTH4_dom,pfam_SH3_2,pfam_FERM_central,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,superfamily_FERM_central,superfamily_SH3_domain,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,smart_MyTH4_dom,smart_SH3_domain,smart_Band_41_domain,pfscan_FERM_domain,pfscan_IQ_motif_EF-hand-BS,pfscan_MyTH4_dom,prints_Myosin_head_motor_dom	-	no_errors	MYO15A	HGNC	ENSG00000091536				27	0	0.00	16	2	11.11
NAV1	0	genome.wustl.edu	37	1	201617946	201617948	+	In_Frame_Del	DEL	CGG	CGG	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	CGG	CGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	201617946	201617948	CGG	-	DEL	NAV1	ENST00000367296	human	ensembl	74_37	+1	known	in_frame_del	c.150_152	p.G54in_frame_del	0.545:0.955:0.994	NULL	superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	NAV1	HGNC	ENSG00000134369	tier1			22	0	0.00	5	2	28.57
NCOR1	0	genome.wustl.edu	37	17	15950318	15950318	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	15950318	15950318	T	A	SNP	NCOR1	ENST00000268712	human	ensembl	74_37	-1	known	missense	c.6626	p.K2209M	1.000	NULL	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	NCOR1	HGNC	ENSG00000141027	tier1	-	-	112	0	0.00	21	42	66.67
NFATC2IP	0	genome.wustl.edu	37	16	28975131	28975131	+	Silent	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	28975131	28975131	C	T	SNP	NFATC2IP	ENST00000320805	human	ensembl	74_37	+1	known	silent	c.1207	p.L403	1.000	pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	-	no_errors	NFATC2IP	HGNC	ENSG00000176953	tier1	-	-	77	0	0.00	23	4	14.81
NFE2L2	0	genome.wustl.edu	37	2	178098800	178098800	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	178098800	178098800	T	C	SNP	NFE2L2	ENST00000397062	human	ensembl	74_37	-1	known	missense	c.245	p.E82G	1.000	NULL	pfam_bZIP,superfamily_TF_DNA-bd,superfamily_Serpin_dom,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2L2	HGNC	ENSG00000116044	tier1	-	-	112	0	0.00	32	34	51.52
NLRP4	0	genome.wustl.edu	37	19	56388459	56388459	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	56388459	56388459	G	T	SNP	NLRP4	ENST00000301295	human	ensembl	74_37	+1	known	nonsense	c.2623	p.E875*	0.000	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP4	HGNC	ENSG00000160505	tier1	-	-	129	0	0.00	59	4	6.35
NOMO2	0	genome.wustl.edu	37	16	18549919	18549919	+	Silent	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	18549919	18549919	G	A	SNP	NOMO2	ENST00000381474	human	ensembl	74_37	-1	known	silent	c.1149	p.H383	1.000	pfam_DUF2012,superfamily_Carb-bd-like_fold	pfam_DUF2012,superfamily_Carb-bd-like_fold,superfamily_CarboxyPept-like_regulatory,superfamily_Collagen-bd_Cna_B-typ_dom	-	no_errors	NOMO2	HGNC	ENSG00000185164	tier1	-	-	156	0	0.00	73	6	7.59
NRDE2	0	genome.wustl.edu	37	14	90764706	90764706	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	14	90764706	90764706	A	G	SNP	NRDE2	ENST00000354366	human	ensembl	74_37	-1	known	missense	c.1564	p.F522L	1.000	pfam_NRDE-2	pfam_NRDE-2	-	no_errors	NRDE2	HGNC	ENSG00000119720	tier1	-	-	39	0	0.00	45	4	8.16
NSUN6	0	genome.wustl.edu	37	10	18840738	18840738	+	RNA	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	18840738	18840738	A	G	SNP	NSUN6	ENST00000493816	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	NSUN6	HGNC	ENSG00000241058	tier1	-	-	98	0	0.00	32	4	11.11
NTM	0	genome.wustl.edu	37	11	131530880	131530880	+	RNA	DEL	A	A	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	11	131530880	131530880	A	-	DEL	NTM	ENST00000477098	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.999	-	-	-	no_errors	NTM	HGNC	ENSG00000182667	tier1			45	0	0.00	27	2	6.90
NUTM2B	0	genome.wustl.edu	37	10	81466077	81466077	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	81466077	81466077	C	A	SNP	NUTM2B	ENST00000429828	human	ensembl	74_37	+1	known	missense	c.662	p.T221N	0.006	NULL	NULL	-	no_errors	NUTM2B	HGNC	ENSG00000188199	tier1	-	-	80	0	0.00	33	6	15.38
NYNRIN	0	genome.wustl.edu	37	14	24884194	24884194	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	14	24884194	24884194	C	T	SNP	NYNRIN	ENST00000382554	human	ensembl	74_37	+1	known	missense	c.3239	p.A1080V	0.778	NULL	pfam_RNase_Zc3h12,superfamily_RNaseH-like_dom,pfscan_Integrase_cat-core	-	no_errors	NYNRIN	HGNC	ENSG00000205978				35	0	0.00	27	2	6.90
OR52N1	0	genome.wustl.edu	37	11	5809136	5809136	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	11	5809136	5809136	T	C	SNP	OR52N1	ENST00000317078	human	ensembl	74_37	-1	known	missense	c.911	p.E304G	0.228	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	-	no_errors	OR52N1	HGNC	ENSG00000181001	tier1	-	-	139	0	0.00	79	38	32.48
OR6K6	0	genome.wustl.edu	37	1	158724854	158724854	+	Silent	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	158724854	158724854	G	A	SNP	OR6K6	ENST00000368144	human	ensembl	74_37	+1	known	silent	c.249	p.L83	0.209	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6K6	HGNC	ENSG00000180433	tier1	-	-	78	0	0.00	48	4	7.69
OVCA2	0	genome.wustl.edu	37	17	1946158	1946158	+	Silent	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	1946158	1946158	G	T	SNP	OVCA2	ENST00000572195	human	ensembl	74_37	+1	known	silent	c.444	p.V148	0.005	pfam_Serine_hydrolase_FSH,pfam_PLipase/COase/thioEstase	pfam_Serine_hydrolase_FSH,pfam_PLipase/COase/thioEstase	-	no_errors	OVCA2	HGNC	ENSG00000262664	tier1	-	-	123	0	0.00	53	4	7.02
PABPC4L	0	genome.wustl.edu	37	4	135121430	135121430	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	4	135121430	135121430	C	T	SNP	PABPC4L	ENST00000529122	human	ensembl	74_37	-1	known	missense	c.919	p.E307K	0.834	pfam_RRM_dom,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,smart_RRM_dom,smart_RRM_dom_euk,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC4L	HGNC	ENSG00000254535				77	0	0.00	30	2	6.25
PCDHA9	0	genome.wustl.edu	37	5	140229519	140229519	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	140229519	140229519	G	A	SNP	PCDHA9	ENST00000532602	human	ensembl	74_37	+1	known	missense	c.1439	p.R480Q	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA9	HGNC	ENSG00000204961				198	0	0.00	77	6	7.23
PCDHB4	0	genome.wustl.edu	37	5	140503073	140503073	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	140503073	140503073	C	T	SNP	PCDHB4	ENST00000194152	human	ensembl	74_37	+1	known	missense	c.1493	p.P498L	0.001	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB4	HGNC	ENSG00000081818	tier1	-	-	209	0	0.00	116	31	21.09
PDE4DIP	0	genome.wustl.edu	37	1	144917554	144917554	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	144917554	144917554	T	A	SNP	PDE4DIP	ENST00000369356	human	ensembl	74_37	-1	known	missense	c.1550	p.D517V	1.000	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	tier1	-	-	79	0	0.00	42	8	16.00
PGAM5	0	genome.wustl.edu	37	12	133295362	133295362	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	133295362	133295362	T	C	SNP	PGAM5	ENST00000317555	human	ensembl	74_37	+1	known	missense	c.734	p.L245S	0.003	NULL	pfam_His_Pase_superF_clade-1,smart_His_Pase_superF_clade-1	-	no_errors	PGAM5	HGNC	ENSG00000247077	tier1	-	-	72	0	0.00	25	13	34.21
PHF21A	0	genome.wustl.edu	37	11	45992882	45992882	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	11	45992882	45992882	T	C	SNP	PHF21A	ENST00000257821	human	ensembl	74_37	-1	known	missense	c.397	p.T133A	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PHF21A	HGNC	ENSG00000135365	tier1	-	-	66	0	0.00	55	4	6.78
PHOX2B	0	genome.wustl.edu	37	4	41749533	41749533	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	4	41749533	41749533	C	A	SNP	PHOX2B	ENST00000226382	human	ensembl	74_37	-1	known	missense	c.262	p.D88Y	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Antifreeze_1	-	no_errors	PHOX2B	HGNC	ENSG00000109132				77	0	0.00	25	3	10.71
PIEZO2	0	genome.wustl.edu	37	18	10741063	10741064	+	Frame_Shift_Ins	INS	-	-	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	18	10741063	10741064	-	T	INS	PIEZO2	ENST00000580640	human	ensembl	74_37	-1	novel	frame_shift_ins	c.4674_4673	p.Q1559fs	1.000:1.000	NULL	pfam_Piezo	-	no_errors	PIEZO2	HGNC	ENSG00000154864	tier1			74	0	0.00	35	3	7.89
PIK3R5	0	genome.wustl.edu	37	17	8793372	8793372	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	8793372	8793372	G	A	SNP	PIK3R5	ENST00000269300	human	ensembl	74_37	-1	known	missense	c.554	p.S185L	0.107	NULL	pfam_PI3K_1B_gamma_p101_su	-	no_errors	PIK3R5	HGNC	ENSG00000141506	tier1	-	-	95	0	0.00	16	24	60.00
PITPNA-AS1	0	genome.wustl.edu	37	17	1421325	1421325	+	RNA	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	1421325	1421325	C	T	SNP	PITPNA-AS1	ENST00000425081	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	PITPNA-AS1	HGNC	ENSG00000236618	tier1	-	-	127	0	0.00	73	4	5.19
PNLIPRP3	0	genome.wustl.edu	37	10	118220679	118220679	+	Splice_Site	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	118220679	118220679	G	T	SNP	PNLIPRP3	ENST00000369230	human	ensembl	74_37	+1	known	splice_site	c.686-1	e7-1	1.000	-	-	-	no_errors	PNLIPRP3	HGNC	ENSG00000203837	tier1	-	-	141	0	0.00	91	5	5.21
POT1	0	genome.wustl.edu	37	7	124532386	124532386	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	7	124532386	124532386	C	A	SNP	POT1	ENST00000357628	human	ensembl	74_37	-1	known	missense	c.58	p.G20C	0.965	pfam_Telomer_end-bd_POT1/Cdc13,superfamily_NA-bd_OB-fold,smart_Telomer_end-bd_POT1/Cdc13	pfam_Telomer_end-bd_POT1/Cdc13,superfamily_NA-bd_OB-fold,smart_Telomer_end-bd_POT1/Cdc13	-	no_errors	POT1	HGNC	ENSG00000128513	tier1	-	-	130	0	0.00	96	7	6.80
PPP2R3C	0	genome.wustl.edu	37	14	35564324	35564324	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	14	35564324	35564324	C	T	SNP	PPP2R3C	ENST00000261475	human	ensembl	74_37	-1	known	missense	c.905	p.G302E	1.000	NULL	NULL	-	no_errors	PPP2R3C	HGNC	ENSG00000092020				84	0	0.00	73	4	5.19
PPWD1	0	genome.wustl.edu	37	5	64878949	64878949	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	64878949	64878949	A	G	SNP	PPWD1	ENST00000261308	human	ensembl	74_37	+1	known	missense	c.1435	p.M479V	1.000	superfamily_Cyclophilin-like_PPIase_dom	pfam_Cyclophilin-like_PPIase_dom,pfam_WD40_repeat,superfamily_Cyclophilin-like_PPIase_dom,superfamily_WD40_repeat_dom,smart_WD40_repeat,prints_Cyclophilin-like_PPIase_dom,pfscan_Cyclophilin-like_PPIase_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	PPWD1	HGNC	ENSG00000113593	tier1	-	-	123	0	0.00	25	37	59.68
PRAMEF2	0	genome.wustl.edu	37	1	12919952	12919952	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	12919952	12919952	T	A	SNP	PRAMEF2	ENST00000240189	human	ensembl	74_37	+1	known	missense	c.692	p.M231K	0.041	NULL	NULL	-	no_errors	PRAMEF2	HGNC	ENSG00000120952	tier1	-	-	359	0	0.00	168	10	5.62
PREPL	0	genome.wustl.edu	37	2	44559740	44559740	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	44559740	44559740	C	A	SNP	PREPL	ENST00000260648	human	ensembl	74_37	-1	known	missense	c.1211	p.C404F	1.000	pfam_Pept_S9A_N	pfam_Peptidase_S9,pfam_Pept_S9A_N,prints_Peptidase_S9A	-	no_errors	PREPL	HGNC	ENSG00000138078	tier1	-	-	94	0	0.00	34	24	40.68
PRSS36	0	genome.wustl.edu	37	16	31151942	31151942	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	31151942	31151942	G	-	DEL	PRSS36	ENST00000268281	human	ensembl	74_37	-1	known	frame_shift_del	c.2038	p.L680fs	0.448	pirsf_Pept_S1A_polyserase-2,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pirsf_Pept_S1A_polyserase-2,pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	PRSS36	HGNC	ENSG00000178226	tier1			52	0	0.00	33	3	8.33
PTCH2	0	genome.wustl.edu	37	1	45293815	45293815	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	45293815	45293815	G	T	SNP	PTCH2	ENST00000372192	human	ensembl	74_37	-1	known	missense	c.1758	p.D586E	0.000	pfam_Patched,tigrfam_TM_rcpt_patched	pfam_Patched,pfscan_SSD,tigrfam_TM_rcpt_patched	-	no_errors	PTCH2	HGNC	ENSG00000117425				49	0	0.00	23	2	8.00
PTGS2	0	genome.wustl.edu	37	1	186643414	186643414	+	RNA	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	186643414	186643414	T	C	SNP	PTGS2	ENST00000490885	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.327	-	-	-	no_errors	PTGS2	HGNC	ENSG00000073756	tier1	-	-	58	0	0.00	22	15	40.54
PTPRT	0	genome.wustl.edu	37	20	41306627	41306627	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	20	41306627	41306627	G	T	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	missense	c.1032	p.N344K	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090	tier1	rs202093079	-	90	0	0.00	27	26	49.06
PTPRT	0	genome.wustl.edu	37	20	41400075	41400075	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	20	41400075	41400075	C	A	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	missense	c.684	p.Q228H	1.000	pfscan_Ig-like_dom	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090				58	0	0.00	36	2	5.26
PTX4	0	genome.wustl.edu	37	16	1536208	1536208	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	1536208	1536208	C	T	SNP	PTX4	ENST00000447419	human	ensembl	74_37	-1	known	missense	c.1169	p.R390K	0.996	pfam_Pentaxin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	pfam_Pentaxin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	PTX4	HGNC	ENSG00000251692	tier1	-	-	105	0	0.00	34	18	34.62
RANBP6	0	genome.wustl.edu	37	9	6012690	6012690	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	9	6012690	6012690	T	-	DEL	RANBP6	ENST00000259569	human	ensembl	74_37	-1	known	frame_shift_del	c.2918	p.N973fs	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	RANBP6	HGNC	ENSG00000137040	tier1			54	0	0.00	26	2	7.14
RASL11B	0	genome.wustl.edu	37	4	53730489	53730490	+	RNA	INS	-	-	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	4	53730489	53730490	-	A	INS	RASL11B	ENST00000505041	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	RASL11B	HGNC	ENSG00000128045	tier1			27	0	0.00	12	2	14.29
RGPD4	0	genome.wustl.edu	37	2	108488905	108488905	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	108488905	108488905	G	A	SNP	RGPD4	ENST00000354986	human	ensembl	74_37	+1	known	missense	c.4445	p.S1482N	0.001	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_1,pfam_TPR_2,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD4	HGNC	ENSG00000196862	tier1	-	-	57	0	0.00	23	12	34.29
RHOF	0	genome.wustl.edu	37	12	122219079	122219079	+	Silent	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	122219079	122219079	C	T	SNP	RHOF	ENST00000267205	human	ensembl	74_37	-1	known	silent	c.246	p.R82	0.965	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RHOF	HGNC	ENSG00000139725	tier1	-	-	71	0	0.00	51	5	8.93
RICTOR	0	genome.wustl.edu	37	5	38949966	38949966	+	Frame_Shift_Del	DEL	A	A	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	38949966	38949966	A	-	DEL	RICTOR	ENST00000296782	human	ensembl	74_37	-1	known	frame_shift_del	c.3984	p.F1328fs	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	RICTOR	HGNC	ENSG00000164327	tier1			42	0	0.00	34	2	5.56
RNF149	0	genome.wustl.edu	37	2	101911541	101911541	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	101911541	101911541	C	T	SNP	RNF149	ENST00000295317	human	ensembl	74_37	-1	known	missense	c.563	p.G188D	1.000	NULL	pfam_Protease-assoc_domain,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF149	HGNC	ENSG00000163162	tier1	-	-	88	0	0.00	41	4	8.89
ROCK1P1	0	genome.wustl.edu	37	18	121622	121623	+	RNA	INS	-	-	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	18	121622	121623	-	T	INS	ROCK1P1	ENST00000608049	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999:1.000	-	-	-	no_errors	ROCK1P1	HGNC	ENSG00000263006	tier1			75	0	0.00	33	20	37.74
ROGDI	0	genome.wustl.edu	37	16	4848675	4848675	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	4848675	4848675	G	T	SNP	ROGDI	ENST00000587377	human	ensembl	74_37	-1	known	missense	c.439	p.P147T	0.078	NULL	pfam_RAVE2/Rogdi	-	no_errors	ROGDI	HGNC	ENSG00000067836	tier1	-	-	144	0	0.00	58	4	6.45
RTN1	0	genome.wustl.edu	37	14	60194151	60194151	+	Silent	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	14	60194151	60194151	G	A	SNP	RTN1	ENST00000267484	human	ensembl	74_37	-1	known	silent	c.1251	p.S417	0.097	NULL	pfam_Reticulon,pfscan_Reticulon	-	no_errors	RTN1	HGNC	ENSG00000139970				30	0	0.00	22	3	12.00
SERPINE2	0	genome.wustl.edu	37	2	224862917	224862917	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	224862917	224862917	G	T	SNP	SERPINE2	ENST00000258405	human	ensembl	74_37	-1	known	missense	c.402	p.F134L	0.967	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINE2	HGNC	ENSG00000135919	tier1	-	-	107	0	0.00	54	4	6.90
SGK223	0	genome.wustl.edu	37	8	8185637	8185637	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	8	8185637	8185637	T	A	SNP	SGK223	ENST00000330777	human	ensembl	74_37	-1	known	missense	c.2655	p.K885N	0.995	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	SGK223	Uniprot_gn	ENSG00000182319	tier1	-	-	103	0	0.00	55	4	6.78
SH3D19	0	genome.wustl.edu	37	4	152147325	152147325	+	RNA	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	4	152147325	152147325	G	T	SNP	SH3D19	ENST00000474743	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SH3D19	HGNC	ENSG00000109686	tier1	-	-	49	0	0.00	12	9	42.86
SIDT2	0	genome.wustl.edu	37	11	117060948	117060948	+	Silent	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	11	117060948	117060948	C	A	SNP	SIDT2	ENST00000278951	human	ensembl	74_37	+1	known	silent	c.1623	p.I541	1.000	NULL	NULL	-	no_errors	SIDT2	HGNC	ENSG00000149577				30	0	0.00	19	2	9.52
SIGLEC10	0	genome.wustl.edu	37	19	51919988	51919988	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	51919988	51919988	A	T	SNP	SIGLEC10	ENST00000339313	human	ensembl	74_37	-1	known	missense	c.638	p.L213H	0.999	pfam_CD80_C2-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_CD80_C2-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	SIGLEC10	HGNC	ENSG00000142512	tier1	-	-	238	0	0.00	131	9	6.38
SLC12A6	0	genome.wustl.edu	37	15	34567565	34567565	+	Silent	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	15	34567565	34567565	C	T	SNP	SLC12A6	ENST00000558589	human	ensembl	74_37	-1	known	silent	c.270	p.G90	1.000	NULL	pfam_AA-permease/SLC12A_dom,pfam_K/Cl_cotranspt_1/3,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A6	HGNC	ENSG00000140199	tier1	-	-	70	0	0.00	48	4	7.69
SLC18A2	0	genome.wustl.edu	37	10	119013563	119013563	+	Silent	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	119013563	119013563	T	C	SNP	SLC18A2	ENST00000298472	human	ensembl	74_37	+1	known	silent	c.528	p.F176	0.988	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC18A2	HGNC	ENSG00000165646				56	0	0.00	34	3	8.11
SLC24A1	0	genome.wustl.edu	37	15	65916671	65916671	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	15	65916671	65916671	G	A	SNP	SLC24A1	ENST00000261892	human	ensembl	74_37	+1	known	missense	c.253	p.E85K	0.001	tigrfam_K-dep_Na/Ca-exchanger	pfam_NaCa_Exmemb,tigrfam_K-dep_Na/Ca-exchanger,tigrfam_K/Na/Ca-exchanger	-	no_errors	SLC24A1	HGNC	ENSG00000074621	tier1	-	-	94	0	0.00	67	10	12.99
SLC34A1	0	genome.wustl.edu	37	5	176812815	176812815	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	5	176812815	176812815	C	T	SNP	SLC34A1	ENST00000324417	human	ensembl	74_37	+1	known	nonsense	c.73	p.R25*	0.014	NULL	pfam_Na/Pi_transpt,tigrfam_Na/Pi_transpt	-	no_errors	SLC34A1	HGNC	ENSG00000131183				103	0	0.00	36	2	5.26
SLC4A2	0	genome.wustl.edu	37	7	150769142	150769142	+	Silent	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	7	150769142	150769142	C	T	SNP	SLC4A2	ENST00000413384	human	ensembl	74_37	+1	known	silent	c.2454	p.F818	0.970	pfam_HCO3_transpt_C,prints_HCO3_transpt_euk,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange,prints_Anion_exchange_2,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A2	HGNC	ENSG00000164889	tier1	-	-	67	0	0.00	30	4	11.76
SLC4A3	0	genome.wustl.edu	37	2	220493143	220493143	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	220493143	220493143	A	G	SNP	SLC4A3	ENST00000273063	human	ensembl	74_37	+1	known	missense	c.68	p.E23G	1.000	NULL	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange_3,prints_Anion_exchange,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A3	HGNC	ENSG00000114923				87	0	0.00	32	3	8.57
SLK	0	genome.wustl.edu	37	10	105762241	105762241	+	Silent	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	105762241	105762241	C	T	SNP	SLK	ENST00000369755	human	ensembl	74_37	+1	known	silent	c.1305	p.D435	0.002	superfamily_Kinase-like_dom	pfam_PKK,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_UVR_dom,pfscan_Prot_kinase_dom	-	no_errors	SLK	HGNC	ENSG00000065613	tier1	-	-	66	0	0.00	26	15	36.59
SMARCA4	0	genome.wustl.edu	37	19	11100104	11100104	+	Silent	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	11100104	11100104	G	A	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	silent	c.1230	p.L410	0.996	NULL	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	tier1	-	-	167	0	0.00	110	7	5.98
SMC2	0	genome.wustl.edu	37	9	106887320	106887321	+	Frame_Shift_Ins	INS	-	-	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	9	106887320	106887321	-	A	INS	SMC2	ENST00000286398	human	ensembl	74_37	+1	known	frame_shift_ins	c.2385_2386	p.L797fs	1.000:1.000	superfamily_P-loop_NTPase	pfam_RecF/RecN/SMC_N,pfam_SMC_hinge,superfamily_P-loop_NTPase,superfamily_SMC_hinge,smart_SMC_hinge	-	no_errors	SMC2	HGNC	ENSG00000136824	tier1			56	0	0.00	36	11	23.40
SMG8	0	genome.wustl.edu	37	17	57289730	57289730	+	Silent	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	57289730	57289730	G	A	SNP	SMG8	ENST00000300917	human	ensembl	74_37	+1	known	silent	c.1788	p.P596	0.718	pfam_Smg8/Smg9	pfam_Smg8/Smg9	-	no_errors	SMG8	HGNC	ENSG00000167447	tier1	-	-	125	0	0.00	103	19	15.32
SMURF2	0	genome.wustl.edu	37	17	62543830	62543830	+	Silent	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	62543830	62543830	G	A	SNP	SMURF2	ENST00000262435	human	ensembl	74_37	-1	known	silent	c.1959	p.V653	1.000	pfam_HECT,superfamily_HECT,smart_HECT,pfscan_HECT	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	SMURF2	HGNC	ENSG00000108854	tier1	-	-	119	0	0.00	53	43	44.33
SNED1	0	genome.wustl.edu	37	2	241991851	241991851	+	Silent	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	241991851	241991851	C	T	SNP	SNED1	ENST00000310397	human	ensembl	74_37	+1	known	silent	c.2049	p.C683	0.898	smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Fibronectin_type3,pfam_Nidogen_extracell_dom,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_Fibronectin_type3,superfamily_Sushi_SCR_CCP,smart_Nidogen_extracell_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Fibronectin_type3,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Sushi_SCR_CCP	-	no_errors	SNED1	HGNC	ENSG00000162804				106	0	0.00	54	3	5.26
SORBS2	0	genome.wustl.edu	37	4	186544620	186544622	+	In_Frame_Del	DEL	GGT	GGT	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	GGT	GGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	4	186544620	186544622	GGT	-	DEL	SORBS2	ENST00000284776	human	ensembl	74_37	-1	known	in_frame_del	c.1951_1949	p.H650in_frame_del	1.000:1.000:1.000	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_Sorb,superfamily_SH3_domain,smart_Sorb,smart_SH3_domain,pfscan_Sorb,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	SORBS2	HGNC	ENSG00000154556	tier1			20	0	0.00	5	2	28.57
SP100	0	genome.wustl.edu	37	2	231371134	231371134	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	231371134	231371134	G	T	SNP	SP100	ENST00000340126	human	ensembl	74_37	+1	known	nonsense	c.1987	p.G663*	0.063	pfam_SAND_dom,superfamily_SAND_dom-like,smart_SAND_dom,pfscan_SAND_dom	pfam_Sp100,pfam_SAND_dom,pfam_Bromodomain,superfamily_SAND_dom-like,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_SAND_dom,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_SAND_dom	-	no_errors	SP100	HGNC	ENSG00000067066	tier1	-	-	67	0	0.00	46	4	8.00
SPATA2	0	genome.wustl.edu	37	20	48523309	48523309	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	20	48523309	48523309	C	T	SNP	SPATA2	ENST00000289431	human	ensembl	74_37	-1	known	missense	c.410	p.C137Y	0.809	NULL	NULL	-	no_errors	SPATA2	HGNC	ENSG00000158480				73	0	0.00	26	2	7.14
SPATC1	0	genome.wustl.edu	37	8	145095486	145095486	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	8	145095486	145095486	C	T	SNP	SPATC1	ENST00000377470	human	ensembl	74_37	+1	known	missense	c.784	p.P262S	0.003	NULL	NULL	-	no_errors	SPATC1	HGNC	ENSG00000186583				48	0	0.00	37	2	5.13
STOX1	0	genome.wustl.edu	37	10	70644114	70644114	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	70644114	70644114	A	G	SNP	STOX1	ENST00000298596	human	ensembl	74_37	+1	known	missense	c.562	p.T188A	1.000	pfam_Storkhead-box_winged-helix	pfam_Storkhead-box_winged-helix	-	no_errors	STOX1	HGNC	ENSG00000165730				70	0	0.00	43	4	8.51
SYNE2	0	genome.wustl.edu	37	14	64691245	64691245	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	14	64691245	64691245	G	T	SNP	SYNE2	ENST00000358025	human	ensembl	74_37	+1	known	missense	c.20449	p.V6817L	0.000	NULL	pfam_CH-domain,pfam_KASH,pfam_Spectrin_repeat,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE2	HGNC	ENSG00000054654	tier1	-	-	70	0	0.00	22	26	54.17
SYTL2	0	genome.wustl.edu	37	11	85435274	85435274	+	Silent	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	11	85435274	85435274	T	C	SNP	SYTL2	ENST00000359152	human	ensembl	74_37	-1	known	silent	c.3798	p.A1266	0.006	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	SYTL2	HGNC	ENSG00000137501				62	0	0.00	29	3	9.38
TAF2	0	genome.wustl.edu	37	8	120793408	120793408	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	8	120793408	120793408	C	G	SNP	TAF2	ENST00000378164	human	ensembl	74_37	-1	known	missense	c.2138	p.W713S	1.000	superfamily_ARM-type_fold	pfam_Peptidase_M1_N,superfamily_ARM-type_fold	-	no_errors	TAF2	HGNC	ENSG00000064313	tier1	-	-	92	0	0.00	53	4	7.02
TET2	0	genome.wustl.edu	37	4	106156651	106156652	+	Frame_Shift_Ins	INS	-	-	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	4	106156651	106156652	-	T	INS	TET2	ENST00000380013	human	ensembl	74_37	+1	known	frame_shift_ins	c.1552_1553	p.G520fs	0.000:0.000	NULL	NULL	-	no_errors	TET2	HGNC	ENSG00000168769	tier1			37	0	0.00	23	2	8.00
TET3	0	genome.wustl.edu	37	2	74274965	74274965	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	74274965	74274965	C	T	SNP	TET3	ENST00000409262	human	ensembl	74_37	+1	known	nonsense	c.1516	p.Q506*	0.972	NULL	NULL	-	no_errors	TET3	HGNC	ENSG00000187605	tier1	-	-	58	0	0.00	30	4	11.76
TEX41	0	genome.wustl.edu	37	2	145909903	145909903	+	RNA	DEL	A	A	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	145909903	145909903	A	-	DEL	TEX41	ENST00000597173	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.072	-	-	-	no_errors	TEX41	HGNC	ENSG00000226674	tier1			13	0	0.00	7	2	22.22
TFAP2D	0	genome.wustl.edu	37	6	50696619	50696619	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	50696619	50696619	C	T	SNP	TFAP2D	ENST00000008391	human	ensembl	74_37	+1	known	missense	c.649	p.R217C	1.000	pfam_TF_AP2_C	pfam_TF_AP2_C,prints_TF_AP2_C	-	no_errors	TFAP2D	HGNC	ENSG00000008197				85	0	0.00	30	3	9.09
TG	0	genome.wustl.edu	37	8	133925360	133925360	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	8	133925360	133925360	C	A	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	missense	c.4228	p.L1410I	1.000	pirsf_Thyroglobulin	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832	tier1	-	-	95	0	0.00	63	4	5.97
THBS2	0	genome.wustl.edu	37	6	169648886	169648886	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	169648886	169648886	G	A	SNP	THBS2	ENST00000366787	human	ensembl	74_37	-1	known	missense	c.235	p.R79W	0.939	superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	pfam_Thrombospondin_C,pfam_Thrombospondin_1_rpt,pfam_VWF_C,pfam_Thrombospondin_3-like_rpt,pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Thrombospondin_1_rpt,smart_Laminin_G,smart_VWF_C,smart_Thrombospondin_1_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Thrombospondin_1_rpt,pfscan_VWF_C	-	no_errors	THBS2	HGNC	ENSG00000186340				65	0	0.00	36	2	5.26
THNSL1	0	genome.wustl.edu	37	10	25313365	25313365	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	25313365	25313365	G	T	SNP	THNSL1	ENST00000376356	human	ensembl	74_37	+1	known	missense	c.1213	p.A405S	1.000	pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF,tigrfam_Thr_synthase_like	pfam_Shikimate_kinase/TSH1,pfam_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_Trp_syn_b_sub_like_PLP_eny_SF,superfamily_P-loop_NTPase,prints_Shikimate_kinase/TSH1,tigrfam_Thr_synthase_like	-	no_errors	THNSL1	HGNC	ENSG00000185875				81	0	0.00	36	2	5.26
THSD7B	0	genome.wustl.edu	37	2	137814518	137814518	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	137814518	137814518	C	A	SNP	THSD7B	ENST00000272643	human	ensembl	74_37	+1	known	nonsense	c.668	p.S223*	0.325	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD7B	HGNC	ENSG00000144229	tier1	-	-	67	0	0.00	21	24	53.33
TMEM88B	0	genome.wustl.edu	37	1	1361531	1361533	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	1361531	1361533	GGA	-	DEL	TMEM88B	ENST00000378821	human	ensembl	74_37	+1	novel	in_frame_del	c.24_26	p.E12in_frame_del	0.001:0.809:0.920	NULL	NULL	-	no_errors	TMEM88B	HGNC	ENSG00000205116	tier1			30	0	0.00	11	2	15.38
TNFSF9	0	genome.wustl.edu	37	19	6534855	6534855	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	6534855	6534855	G	C	SNP	TNFSF9	ENST00000245817	human	ensembl	74_37	+1	known	missense	c.543	p.L181F	0.017	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom	pfam_TNF_dom,superfamily_Tumour_necrosis_fac-like_dom,smart_TNF_dom,pfscan_TNF_dom	-	no_errors	TNFSF9	HGNC	ENSG00000125657	tier1	-	-	34	0	0.00	19	7	26.92
TP53	0	genome.wustl.edu	37	17	7574035	7574035	+	Splice_Site	SNP	T	T	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	7574035	7574035	T	G	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	splice_site	c.994-2	e9-2	1.000	-	-	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	36	0	0.00	3	8	72.73
TP53TG3D	0	genome.wustl.edu	37	16	32266327	32266327	+	RNA	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	32266327	32266327	A	G	SNP	TP53TG3D	ENST00000564810	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.282	-	-	-	no_errors	TP53TG3D	HGNC	ENSG00000205456	tier1	-	-	65	0	0.00	34	15	30.61
TPR	0	genome.wustl.edu	37	1	186324664	186324664	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	186324664	186324664	T	A	SNP	TPR	ENST00000367478	human	ensembl	74_37	-1	known	missense	c.2049	p.K683N	1.000	NULL	pfam_TPR_MLP1_2,superfamily_Prefoldin,superfamily_tRNA-bd_arm	-	no_errors	TPR	HGNC	ENSG00000047410	tier1	-	-	88	0	0.00	34	36	51.43
TPRXL	0	genome.wustl.edu	37	3	14105969	14105970	+	In_Frame_Ins	INS	-	-	CAA			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	3	14105969	14105970	-	CAA	INS	TPRXL	ENST00000326972	human	ensembl	74_37	+1	known	in_frame_ins	c.293_294	p.99in_frame_insN	0.643:0.292	NULL	NULL	-	no_errors	TPRXL	HGNC	ENSG00000180438	tier1			39	0	0.00	12	2	14.29
TRIM6-TRIM34	0	genome.wustl.edu	37	11	5655862	5655862	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	11	5655862	5655862	A	T	SNP	TRIM6-TRIM34	ENST00000354852	human	ensembl	74_37	+1	known	missense	c.1583	p.Y528F	0.001	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM6-TRIM34	HGNC	ENSG00000258588	tier1	-	-	43	0	0.00	17	5	22.73
TRPM3	0	genome.wustl.edu	37	9	73213386	73213386	+	Silent	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	9	73213386	73213386	G	T	SNP	TRPM3	ENST00000423814	human	ensembl	74_37	-1	known	silent	c.3042	p.I1014	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom	-	no_errors	TRPM3	HGNC	ENSG00000083067	tier1	-	-	58	0	0.00	28	4	12.50
TSG101	0	genome.wustl.edu	37	11	18502163	18502163	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	11	18502163	18502163	C	T	SNP	TSG101	ENST00000251968	human	ensembl	74_37	-1	known	missense	c.1103	p.R368H	1.000	pfam_Steadiness_box	pfam_UEV_N,pfam_Steadiness_box,superfamily_UBQ-conjugating_enzyme/RWD	-	no_errors	TSG101	HGNC	ENSG00000074319	tier1	-	-	84	0	0.00	71	4	5.33
TSGA10	0	genome.wustl.edu	37	2	99720450	99720450	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	99720450	99720450	T	A	SNP	TSGA10	ENST00000355053	human	ensembl	74_37	-1	known	missense	c.591	p.K197N	1.000	NULL	NULL	-	no_errors	TSGA10	HGNC	ENSG00000135951	tier1	-	-	117	0	0.00	74	5	6.33
TTC28	0	genome.wustl.edu	37	22	28503113	28503113	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	22	28503113	28503113	G	A	SNP	TTC28	ENST00000397906	human	ensembl	74_37	-1	novel	missense	c.2720	p.A907V	1.000	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC28	HGNC	ENSG00000100154				70	0	0.00	54	3	5.26
TTLL13	0	genome.wustl.edu	37	15	90805255	90805255	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	15	90805255	90805255	C	T	SNP	TTLL13	ENST00000438251	human	ensembl	74_37	+1	known	missense	c.1370	p.S457L	0.027	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL13	HGNC	ENSG00000213471	tier1	-	-	74	0	0.00	40	22	35.48
TTN	0	genome.wustl.edu	37	2	179451855	179451855	+	Silent	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	179451855	179451855	T	C	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	silent	c.56379	p.S18793	0.993	superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	69	0	0.00	40	4	9.09
TTN	0	genome.wustl.edu	37	2	179659182	179659182	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	179659182	179659182	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.1342	p.Q448K	1.000	pfam_Titin_Z,superfamily_RNaseH-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				52	0	0.00	46	3	6.12
UACA	0	genome.wustl.edu	37	15	70960127	70960127	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	15	70960127	70960127	C	T	SNP	UACA	ENST00000322954	human	ensembl	74_37	-1	known	missense	c.2896	p.E966K	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,superfamily_Prefoldin,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_T_SNARE_dom,prints_Ankyrin_rpt	-	no_errors	UACA	HGNC	ENSG00000137831				49	0	0.00	38	2	5.00
UBR2	0	genome.wustl.edu	37	6	42652546	42652546	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	42652546	42652546	C	A	SNP	UBR2	ENST00000372899	human	ensembl	74_37	+1	known	missense	c.4790	p.S1597Y	0.997	NULL	pfam_ClpS_core,pfam_Znf_N-recognin,superfamily_Ribosomal_L7/12_C/ClpS-like,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR2	HGNC	ENSG00000024048	tier1	-	-	166	0	0.00	83	6	6.74
UNC13C	0	genome.wustl.edu	37	15	54916018	54916018	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	15	54916018	54916018	G	T	SNP	UNC13C	ENST00000260323	human	ensembl	74_37	+1	known	missense	c.6225	p.W2075C	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13C	HGNC	ENSG00000137766	tier1	-	-	106	0	0.00	63	4	5.97
UPP1	0	genome.wustl.edu	37	7	48147845	48147845	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	7	48147845	48147845	G	T	SNP	UPP1	ENST00000331803	human	ensembl	74_37	+1	known	missense	c.824	p.R275L	1.000	pfam_Nucleoside_phosphorylase_d,tigrfam_Uridine_phosphorylase_euk	pfam_Nucleoside_phosphorylase_d,tigrfam_Uridine_phosphorylase_euk	-	no_errors	UPP1	HGNC	ENSG00000183696	tier1	-	-	86	0	0.00	52	31	36.90
USH2A	0	genome.wustl.edu	37	1	216052369	216052369	+	Silent	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	1	216052369	216052369	G	A	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	silent	c.8295	p.H2765	0.001	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	73	0	0.00	43	8	15.69
USP34	0	genome.wustl.edu	37	2	61493302	61493302	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	2	61493302	61493302	C	T	SNP	USP34	ENST00000398571	human	ensembl	74_37	-1	known	missense	c.5434	p.E1812K	1.000	superfamily_ARM-type_fold	pfam_Peptidase_C19/C67,superfamily_ARM-type_fold,pfscan_Peptidase_C19/C67	-	no_errors	USP34	HGNC	ENSG00000115464	tier1	-	-	54	0	0.00	43	5	10.42
USP5	0	genome.wustl.edu	37	12	6975191	6975191	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	12	6975191	6975191	C	T	SNP	USP5	ENST00000229268	human	ensembl	74_37	+1	known	missense	c.2527	p.P843S	1.000	pfam_Peptidase_C19/C67,pirsf_Ubiquitinyl_hydrolase,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_UBA/Ts_N,pfam_Znf_UBP,superfamily_UBA-like,smart_Znf_UBP,smart_UBA/transl_elong_EF1B_N_euk,pirsf_Ubiquitinyl_hydrolase,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP5	HGNC	ENSG00000111667				85	0	0.00	67	4	5.63
VAV1	0	genome.wustl.edu	37	19	6833223	6833223	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	6833223	6833223	G	T	SNP	VAV1	ENST00000602142	human	ensembl	74_37	+1	known	missense	c.1537	p.A513S	0.991	NULL	pfam_DH-domain,pfam_SH3_domain,pfam_SH3_2,pfam_CAMSAP_CH,pfam_SH2,pfam_CH-domain,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_Pleckstrin_homology,superfamily_DH-domain,superfamily_CH-domain,superfamily_SH3_domain,smart_CH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_SH3_domain,smart_SH2,pfscan_CH-domain,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_DH-domain,prints_SH3_domain,prints_SH2,prints_SM22_calponin	-	no_errors	VAV1	HGNC	ENSG00000141968				104	0	0.00	64	4	5.88
VNN1	0	genome.wustl.edu	37	6	133014172	133014172	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	133014172	133014172	T	C	SNP	VNN1	ENST00000367928	human	ensembl	74_37	-1	known	missense	c.817	p.K273E	0.000	superfamily_C-N_Hydrolase,pirsf_Biotinidase_euk,pfscan_C-N_Hydrolase	pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pirsf_Biotinidase_euk,pfscan_C-N_Hydrolase	-	no_errors	VNN1	HGNC	ENSG00000112299	tier1	-	-	67	0	0.00	30	6	16.67
VPS53	0	genome.wustl.edu	37	17	526849	526849	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	526849	526849	G	A	SNP	VPS53	ENST00000437048	human	ensembl	74_37	-1	known	missense	c.1040	p.A347V	1.000	pfam_Vps53_N	pfam_Vps53_N,pfam_Vacuolar_sorting-assoc_54	-	no_errors	VPS53	HGNC	ENSG00000141252	tier1	-	-	121	0	0.00	54	4	6.90
WDR59	0	genome.wustl.edu	37	16	74990506	74990506	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	74990506	74990506	C	T	SNP	WDR59	ENST00000262144	human	ensembl	74_37	-1	known	missense	c.107	p.R36H	1.000	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_UBQ-conjugating_enzyme/RWD,smart_WD40_repeat,smart_RWD-domain,pfscan_RWD-domain,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR59	HGNC	ENSG00000103091				61	0	0.00	32	2	5.88
WDR81	0	genome.wustl.edu	37	17	1640737	1640737	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	17	1640737	1640737	A	G	SNP	WDR81	ENST00000409644	human	ensembl	74_37	+1	known	missense	c.5584	p.T1862A	0.746	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_Kinase-like_dom,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR81	HGNC	ENSG00000167716	tier1	-	-	47	0	0.00	15	4	21.05
WT1	0	genome.wustl.edu	37	11	32456397	32456397	+	Silent	SNP	G	G	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	11	32456397	32456397	G	T	SNP	WT1	ENST00000332351	human	ensembl	74_37	-1	known	silent	c.495	p.S165	0.128	pfam_Wilms_tumour_N	pfam_Wilms_tumour_N,pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2,prints_Wilms_tumour	-	no_errors	WT1	HGNC	ENSG00000184937				100	0	0.00	76	4	5.00
XCR1	0	genome.wustl.edu	37	3	46062533	46062533	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	3	46062533	46062533	G	A	SNP	XCR1	ENST00000309285	human	ensembl	74_37	-1	known	missense	c.907	p.R303W	0.000	prints_Chemokine_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Chemokine_XCR1,prints_GPCR_Rhodpsn,prints_Chemokine_rcpt,prints_Brdyknn_rcpt	-	no_errors	XCR1	HGNC	ENSG00000173578	tier1	-	-	70	0	0.00	43	4	8.51
XPO5	0	genome.wustl.edu	37	6	43528718	43528718	+	Silent	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	43528718	43528718	T	C	SNP	XPO5	ENST00000265351	human	ensembl	74_37	-1	known	silent	c.1038	p.P346	0.058	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPO5	HGNC	ENSG00000124571	tier1	-	-	138	0	0.00	41	22	34.92
XPO5	0	genome.wustl.edu	37	6	43501711	43501711	+	Silent	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	6	43501711	43501711	T	C	SNP	XPO5	ENST00000265351	human	ensembl	74_37	-1	known	silent	c.2376	p.L792	1.000	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPO5	HGNC	ENSG00000124571				57	0	0.00	26	2	7.14
ZBTB38	0	genome.wustl.edu	37	3	141161329	141161329	+	Silent	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	3	141161329	141161329	C	T	SNP	ZBTB38	ENST00000321464	human	ensembl	74_37	+1	known	silent	c.102	p.C34	0.999	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_BTB_POZ,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB38	HGNC	ENSG00000177311				63	0	0.00	55	4	6.78
ZCCHC18	0	genome.wustl.edu	37	X	103359001	103359001	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	X	103359001	103359001	C	A	SNP	ZCCHC18	ENST00000537356	human	ensembl	74_37	+1	putative	missense	c.199	p.Q67K	0.999	NULL	superfamily_Znf_CCHC	-	no_errors	ZCCHC18	HGNC	ENSG00000166707	tier1	-	-	26	0	0.00	13	8	38.10
ZCCHC24	0	genome.wustl.edu	37	10	81154164	81154164	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	81154164	81154164	G	A	SNP	ZCCHC24	ENST00000372333	human	ensembl	74_37	-1	known	missense	c.301	p.P101S	1.000	NULL	NULL	-	no_errors	ZCCHC24	HGNC	ENSG00000165424	tier1	-	-	59	0	0.00	36	4	10.00
ZEB1	0	genome.wustl.edu	37	10	31810432	31810432	+	Silent	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	10	31810432	31810432	T	C	SNP	ZEB1	ENST00000361642	human	ensembl	74_37	+1	known	silent	c.2172	p.A724	0.155	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZEB1	HGNC	ENSG00000148516	tier1	-	-	88	0	0.00	43	5	10.42
ZFAS1	0	genome.wustl.edu	37	20	47897085	47897086	+	RNA	DEL	AT	AT	-			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	20	47897085	47897086	AT	-	DEL	ZFAS1	ENST00000326677	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	ZFAS1	HGNC	ENSG00000177410	tier1			46	0	0.00	44	8	15.38
ZFHX3	0	genome.wustl.edu	37	16	72831852	72831852	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	72831852	72831852	G	A	SNP	ZFHX3	ENST00000268489	human	ensembl	74_37	-1	known	missense	c.4729	p.L1577F	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836	tier1	-	-	95	0	0.00	31	18	36.73
ZIC4	0	genome.wustl.edu	37	3	147123195	147123195	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	3	147123195	147123195	C	T	SNP	ZIC4	ENST00000425731	human	ensembl	74_37	-1	known	missense	c.64	p.V22I	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC4	HGNC	ENSG00000174963	tier1	-	-	169	0	0.00	128	7	5.19
ZNF462	0	genome.wustl.edu	37	9	109691399	109691399	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	9	109691399	109691399	A	T	SNP	ZNF462	ENST00000457913	human	ensembl	74_37	+1	known	missense	c.5206	p.I1736F	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143	tier1	-	-	58	0	0.00	41	4	8.89
ZNF525	0	genome.wustl.edu	37	19	53887184	53887184	+	RNA	SNP	C	C	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	53887184	53887184	C	A	SNP	ZNF525	ENST00000601790	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ZNF525	HGNC	ENSG00000203326	tier1	-	-	38	0	0.00	16	10	38.46
ZNF611	0	genome.wustl.edu	37	19	53219110	53219110	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	19	53219110	53219110	T	C	SNP	ZNF611	ENST00000319783	human	ensembl	74_37	-1	known	missense	c.38	p.K13R	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF611	HGNC	ENSG00000213020				121	0	0.00	58	4	6.45
ZNF720	0	genome.wustl.edu	37	16	31766690	31766690	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8HZ-01A-11D-A36J-09	TCGA-LN-A8HZ-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	e77f4886-c395-4825-91fc-934a09f70561	1cb03d3d-a826-4a48-bd82-a13d05c9c705	16	31766690	31766690	G	A	SNP	ZNF720	ENST00000399681	human	ensembl	74_37	+1	known	missense	c.1078	p.G360R	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF720	HGNC	ENSG00000197302	tier1	-	-	88	0	0.00	37	18	32.73
