Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA1	0	genome.wustl.edu	37	9	107555517	107555517	+	Silent	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	9	107555517	107555517	G	A	SNP	ABCA1	ENST00000374736	human	ensembl	74_37	-1	known	silent	c.5571	p.A1857	0.016	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA1	HGNC	ENSG00000165029	tier1	-	-	91	0	0.00	8	38	82.61
ACSBG1	0	genome.wustl.edu	37	15	78475123	78475123	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	15	78475123	78475123	C	A	SNP	ACSBG1	ENST00000560124	human	ensembl	74_37	-1	known	nonsense	c.136	p.G46*	1.000	NULL	NULL	-	no_errors	ACSBG1	HGNC	ENSG00000103740				30	0	0.00	46	3	6.00
ACSS3	0	genome.wustl.edu	37	12	81537017	81537017	+	Silent	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	81537017	81537017	G	A	SNP	ACSS3	ENST00000548058	human	ensembl	74_37	+1	known	silent	c.912	p.G304	0.001	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSS3	HGNC	ENSG00000111058	tier1	-	-	44	0	0.00	36	34	48.57
ADAMTS2	0	genome.wustl.edu	37	5	178555035	178555035	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	178555035	178555035	C	T	SNP	ADAMTS2	ENST00000251582	human	ensembl	74_37	-1	known	missense	c.2542	p.V848I	0.987	superfamily_Thrombospondin_1_rpt	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS2,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS2	HGNC	ENSG00000087116	tier1	-	-	46	0	0.00	22	25	53.19
ADAMTS9	0	genome.wustl.edu	37	3	64524929	64524929	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	64524929	64524929	C	T	SNP	ADAMTS9	ENST00000498707	human	ensembl	74_37	-1	known	missense	c.5563	p.V1855I	1.000	pfam_Pept_M12B_GON-ADAMTSs,pfscan_Pept_M12B_GON-ADAMTSs	pfam_Pept_M12B_GON-ADAMTSs,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Pept_M12B_GON-ADAMTSs,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS9	HGNC	ENSG00000163638	tier1	-	-	67	0	0.00	59	4	6.35
ADCY3	0	genome.wustl.edu	37	2	25141367	25141367	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	2	25141367	25141367	C	T	SNP	ADCY3	ENST00000260600	human	ensembl	74_37	-1	known	missense	c.490	p.A164T	0.998	NULL	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY3	HGNC	ENSG00000138031	tier1	-	-	46	0	0.00	65	7	9.59
ADNP	0	genome.wustl.edu	37	20	49509654	49509654	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	20	49509654	49509654	T	A	SNP	ADNP	ENST00000349014	human	ensembl	74_37	-1	known	missense	c.1597	p.M533L	0.995	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ADNP	HGNC	ENSG00000101126	tier1	-	-	27	0	0.00	43	22	32.84
AHNAK2	0	genome.wustl.edu	37	14	105406677	105406677	+	Silent	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	14	105406677	105406677	C	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	silent	c.15111	p.G5037	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567				71	0	0.00	71	4	5.26
AIG1	0	genome.wustl.edu	37	6	143382095	143382095	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	6	143382095	143382095	G	T	SNP	AIG1	ENST00000275235	human	ensembl	74_37	+1	known	missense	c.33	p.M11I	0.944	NULL	pfam_Far-17a_AIG1	-	no_errors	AIG1	HGNC	ENSG00000146416	tier1	-	-	23	0	0.00	26	22	45.83
ALDH4A1	0	genome.wustl.edu	37	1	19199390	19199390	+	Silent	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	1	19199390	19199390	G	T	SNP	ALDH4A1	ENST00000290597	human	ensembl	74_37	-1	known	silent	c.1641	p.I547	1.000	superfamily_Ald_DH/histidinol_DH,tigrfam_1-pyrroline-5-COlate_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,tigrfam_1-pyrroline-5-COlate_DH	-	no_errors	ALDH4A1	HGNC	ENSG00000159423	tier1	-	-	44	0	0.00	42	4	8.70
ALKBH3	0	genome.wustl.edu	37	11	43911359	43911359	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	43911359	43911359	G	T	SNP	ALKBH3	ENST00000302708	human	ensembl	74_37	+1	known	missense	c.351	p.Q117H	1.000	NULL	pfam_Oxoglu/Fe-dep_dioxygenase	-	no_errors	ALKBH3	HGNC	ENSG00000166199	tier1	-	-	41	0	0.00	47	4	7.84
AMFR	0	genome.wustl.edu	37	16	56397878	56397878	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	16	56397878	56397878	C	T	SNP	AMFR	ENST00000290649	human	ensembl	74_37	-1	known	missense	c.1739	p.R580H	1.000	NULL	pfam_CUE,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_CUE,pfscan_CUE,pfscan_Znf_RING	-	no_errors	AMFR	HGNC	ENSG00000159461				31	0	0.00	52	3	5.45
AMZ2P1	0	genome.wustl.edu	37	17	62971127	62971127	+	RNA	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	17	62971127	62971127	G	T	SNP	AMZ2P1	ENST00000397713	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.019	-	-	-	no_errors	AMZ2P1	HGNC	ENSG00000214174	tier1	-	-	47	0	0.00	68	4	5.56
ARC	0	genome.wustl.edu	37	8	143694754	143694754	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	8	143694754	143694754	C	A	SNP	ARC	ENST00000356613	human	ensembl	74_37	-1	known	missense	c.879	p.K293N	1.000	NULL	prints_Activity-reg_cytoskelet-assoc	-	no_errors	ARC	HGNC	ENSG00000198576	tier1	-	-	60	0	0.00	50	22	30.56
ARHGAP5	0	genome.wustl.edu	37	14	32561313	32561313	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	14	32561313	32561313	C	T	SNP	ARHGAP5	ENST00000345122	human	ensembl	74_37	+1	known	nonsense	c.1438	p.R480*	1.000	superfamily_FF_domain,smart_FF_domain	pfam_RhoGAP_dom,pfam_FF_domain,pfam_Small_GTPase,superfamily_Rho_GTPase_activation_prot,superfamily_P-loop_NTPase,superfamily_FF_domain,smart_FF_domain,smart_RhoGAP_dom,pfscan_RhoGAP_dom,prints_Small_GTPase	-	no_errors	ARHGAP5	HGNC	ENSG00000100852	tier1	rs201986816	-	93	0	0.00	64	11	14.67
ARL8B	0	genome.wustl.edu	37	3	5164159	5164159	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	5164159	5164159	G	T	SNP	ARL8B	ENST00000455168	human	ensembl	74_37	+1	known	missense	c.181	p.A61S	1.000	NULL	NULL	-	no_errors	ARL8B	HGNC	ENSG00000134108	tier1	-	-	35	0	0.00	61	5	7.58
ARPP19	0	genome.wustl.edu	37	15	52844185	52844185	+	Silent	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	15	52844185	52844185	C	A	SNP	ARPP19	ENST00000249822	human	ensembl	74_37	-1	known	silent	c.285	p.P95	0.994	NULL	pfam_Endosulphine	-	no_errors	ARPP19	HGNC	ENSG00000128989	tier1	-	-	54	0	0.00	65	4	5.80
ASCC1	0	genome.wustl.edu	37	10	73862091	73862091	+	Splice_Site	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	73862091	73862091	C	A	SNP	ASCC1	ENST00000342444	human	ensembl	74_37	-1	known	splice_site	c.1203+1	e11+1	0.000	-	-	-	no_errors	ASCC1	HGNC	ENSG00000138303	tier1	-	-	74	0	0.00	65	24	26.97
ATP8B1	0	genome.wustl.edu	37	18	55371829	55371829	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	18	55371829	55371829	C	A	SNP	ATP8B1	ENST00000283684	human	ensembl	74_37	-1	known	missense	c.351	p.K117N	1.000	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8B1	HGNC	ENSG00000081923	tier1	-	-	60	0	0.00	43	4	8.51
BCHE	0	genome.wustl.edu	37	3	165503943	165503943	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	165503943	165503943	C	T	SNP	BCHE	ENST00000264381	human	ensembl	74_37	-1	known	silent	c.1674	p.L558	1.000	NULL	pfam_CarbesteraseB,pfam_AChE_tetra,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	BCHE	HGNC	ENSG00000114200	tier1	-	-	56	0	0.00	103	32	23.70
BRINP1	0	genome.wustl.edu	37	9	121930291	121930291	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	9	121930291	121930291	C	A	SNP	BRINP1	ENST00000265922	human	ensembl	74_37	-1	known	missense	c.1357	p.G453C	1.000	NULL	pfam_MACPF,smart_MACPF	-	no_errors	BRINP1	HGNC	ENSG00000078725	tier1	-	-	18	0	0.00	11	15	57.69
BRSK2	0	genome.wustl.edu	37	11	1459589	1459589	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	1459589	1459589	G	T	SNP	BRSK2	ENST00000382179	human	ensembl	74_37	+1	known	missense	c.378	p.K126N	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BRSK2	HGNC	ENSG00000174672	tier1	-	-	39	0	0.00	51	4	7.27
C10orf68	0	genome.wustl.edu	37	10	32912718	32912718	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	32912718	32912718	G	T	SNP	C10orf68	ENST00000375028	human	ensembl	74_37	+1	putative	missense	c.58	p.G20C	0.330	NULL	NULL	-	no_errors	C10orf68	HGNC	ENSG00000150076	tier1	-	-	30	0	0.00	44	4	8.33
C10orf68	0	genome.wustl.edu	37	10	33134220	33134220	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	33134220	33134220	G	T	SNP	C10orf68	ENST00000375025	human	ensembl	74_37	+1	known	missense	c.1323	p.K441N	0.002	NULL	NULL	-	no_errors	C10orf68	HGNC	ENSG00000150076	tier1	-	-	89	0	0.00	23	3	11.54
C10orf76	0	genome.wustl.edu	37	10	103716479	103716479	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	103716479	103716479	A	G	SNP	C10orf76	ENST00000370033	human	ensembl	74_37	-1	known	missense	c.1580	p.I527T	1.000	pfam_DUF1741,superfamily_ARM-type_fold	pfam_DUF1741,superfamily_ARM-type_fold	-	no_errors	C10orf76	HGNC	ENSG00000120029	tier1	-	-	26	0	0.00	14	5	26.32
C11orf34	0	genome.wustl.edu	37	11	112123114	112123114	+	Silent	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	112123114	112123114	G	A	SNP	C11orf34	ENST00000338832	human	ensembl	74_37	-1	known	silent	c.405	p.I135	0.000	NULL	NULL	-	no_errors	C11orf34	HGNC	ENSG00000188771	tier1	-	-	39	0	0.00	10	20	66.67
C16orf70	0	genome.wustl.edu	37	16	67174430	67174430	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	16	67174430	67174430	C	A	SNP	C16orf70	ENST00000219139	human	ensembl	74_37	+1	known	missense	c.812	p.P271H	1.000	pfam_UPF0183	pfam_UPF0183	-	no_errors	C16orf70	HGNC	ENSG00000125149				48	0	0.00	56	4	6.67
C1QB	0	genome.wustl.edu	37	1	22987445	22987445	+	Frame_Shift_Del	DEL	A	A	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	1	22987445	22987445	A	-	DEL	C1QB	ENST00000314933	human	ensembl	74_37	+1	known	frame_shift_del	c.328	p.G111fs	0.954	pfam_Collagen	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QB	HGNC	ENSG00000173369	tier1			35	0	0.00	36	2	5.26
C1QTNF1	0	genome.wustl.edu	37	17	77043896	77043896	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	17	77043896	77043896	G	A	SNP	C1QTNF1	ENST00000354124	human	ensembl	74_37	+1	known	missense	c.602	p.G201D	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QTNF1	HGNC	ENSG00000173918	tier1	-	-	43	0	0.00	101	6	5.61
C3orf38	0	genome.wustl.edu	37	3	88199286	88199286	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	88199286	88199286	C	T	SNP	C3orf38	ENST00000318887	human	ensembl	74_37	+1	known	silent	c.84	p.A28	1.000	NULL	NULL	-	no_errors	C3orf38	HGNC	ENSG00000179021	tier1	-	-	72	0	0.00	11	29	72.50
C7orf43	0	genome.wustl.edu	37	7	99754275	99754275	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	7	99754275	99754275	C	T	SNP	C7orf43	ENST00000316937	human	ensembl	74_37	-1	known	missense	c.1058	p.S353N	1.000	NULL	NULL	-	no_errors	C7orf43	HGNC	ENSG00000146826	tier1	-	-	33	0	0.00	42	17	28.81
C8orf48	0	genome.wustl.edu	37	8	13425019	13425019	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	8	13425019	13425019	G	T	SNP	C8orf48	ENST00000297324	human	ensembl	74_37	+1	known	missense	c.519	p.L173F	0.018	NULL	NULL	-	no_errors	C8orf48	HGNC	ENSG00000164743				60	0	0.00	37	3	7.50
CAND2	0	genome.wustl.edu	37	3	12849824	12849824	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	12849824	12849824	G	T	SNP	CAND2	ENST00000456430	human	ensembl	74_37	+1	known	missense	c.483	p.M161I	1.000	superfamily_ARM-type_fold	pfam_TATA-bd_TIP120,pfam_HEAT,superfamily_ARM-type_fold	-	no_errors	CAND2	HGNC	ENSG00000144712	tier1	-	-	35	0	0.00	25	5	16.67
CAPNS1	0	genome.wustl.edu	37	19	36632054	36632054	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	36632054	36632054	C	T	SNP	CAPNS1	ENST00000588780	human	ensembl	74_37	+1	known	silent	c.141	p.G47	0.020	NULL	pfscan_EF_hand_dom	-	no_errors	CAPNS1	HGNC	ENSG00000126247				45	0	0.00	102	8	7.21
CARD10	0	genome.wustl.edu	37	22	37892551	37892551	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	22	37892551	37892551	G	T	SNP	CARD10	ENST00000251973	human	ensembl	74_37	-1	known	missense	c.1964	p.A655D	0.154	NULL	pfam_CARD,superfamily_DEATH-like_dom,pfscan_CARD	-	no_errors	CARD10	HGNC	ENSG00000100065	tier1	-	-	52	0	0.00	40	4	9.09
CASC10	0	genome.wustl.edu	37	10	21784563	21784563	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	21784563	21784563	C	T	SNP	CASC10	ENST00000377113	human	ensembl	74_37	-1	known	missense	c.377	p.G126E	0.057	NULL	NULL	-	no_errors	CASC10	HGNC	ENSG00000204682	tier1	-	-	54	0	0.00	45	11	19.64
CATSPER2P1	0	genome.wustl.edu	37	15	44036467	44036467	+	RNA	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	15	44036467	44036467	C	T	SNP	CATSPER2P1	ENST00000429276	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CATSPER2P1	HGNC	ENSG00000205771	tier1	-	-	63	0	0.00	46	4	8.00
CCDC22	0	genome.wustl.edu	37	X	49106138	49106138	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	X	49106138	49106138	C	T	SNP	CCDC22	ENST00000376227	human	ensembl	74_37	+1	known	silent	c.1722	p.I574	0.600	pfam_DUF812	pfam_DUF812	-	no_errors	CCDC22	HGNC	ENSG00000101997	tier1	-	-	110	0	0.00	80	6	6.98
CCDC36	0	genome.wustl.edu	37	3	49278678	49278678	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	49278678	49278678	C	A	SNP	CCDC36	ENST00000296449	human	ensembl	74_37	+1	known	missense	c.251	p.T84K	0.963	NULL	NULL	-	no_errors	CCDC36	HGNC	ENSG00000173421				85	0	0.00	53	4	7.02
CCNK	0	genome.wustl.edu	37	14	99969323	99969323	+	Splice_Site	SNP	T	T	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	14	99969323	99969323	T	A	SNP	CCNK	ENST00000389879	human	ensembl	74_37	+1	known	splice_site	c.1011+2	e7+2	1.000	-	-	-	no_errors	CCNK	HGNC	ENSG00000090061	tier1	-	-	60	0	0.00	53	14	20.90
CD72	0	genome.wustl.edu	37	9	35610262	35610262	+	RNA	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	9	35610262	35610262	G	T	SNP	CD72	ENST00000490239	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CD72	HGNC	ENSG00000137101	tier1	-	-	97	0	0.00	76	4	5.00
CDH2	0	genome.wustl.edu	37	18	25572711	25572711	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	18	25572711	25572711	C	A	SNP	CDH2	ENST00000269141	human	ensembl	74_37	-1	known	missense	c.1252	p.A418S	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH2	HGNC	ENSG00000170558	tier1	-	-	44	0	0.00	21	25	54.35
CDKN2A	0	genome.wustl.edu	37	9	21971208	21971208	+	Splice_Site	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	9	21971208	21971208	C	T	SNP	CDKN2A	ENST00000361570	human	ensembl	74_37	-1	known	splice_site	c.317-1	e2-1	1.000	-	-	-	no_errors	CDKN2A	HGNC	ENSG00000147889	tier1	-	-	8	0	0.00	4	11	73.33
CENPN	0	genome.wustl.edu	37	16	81047747	81047747	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	16	81047747	81047747	C	T	SNP	CENPN	ENST00000299572	human	ensembl	74_37	+1	known	missense	c.178	p.R60C	0.000	pfam_Chl4/mis15/CENP-N	pfam_Chl4/mis15/CENP-N	-	no_errors	CENPN	HGNC	ENSG00000166451	tier1	rs199499043	-	47	0	0.00	55	8	12.70
CEP164	0	genome.wustl.edu	37	11	117244544	117244544	+	Silent	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	117244544	117244544	C	A	SNP	CEP164	ENST00000278935	human	ensembl	74_37	+1	known	silent	c.1230	p.G410	0.999	NULL	superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	CEP164	HGNC	ENSG00000110274	tier1	-	-	76	0	0.00	33	26	44.07
CEP250	0	genome.wustl.edu	37	20	34089770	34089770	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	20	34089770	34089770	G	A	SNP	CEP250	ENST00000397527	human	ensembl	74_37	+1	known	missense	c.3997	p.E1333K	1.000	NULL	superfamily_Prefoldin	-	no_errors	CEP250	HGNC	ENSG00000126001	tier1	-	-	60	0	0.00	82	55	40.15
CEP290	0	genome.wustl.edu	37	12	88508214	88508214	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	88508214	88508214	G	T	SNP	CEP290	ENST00000309041	human	ensembl	74_37	-1	known	missense	c.2041	p.L681I	1.000	NULL	NULL	-	no_errors	CEP290	HGNC	ENSG00000198707	tier1	-	-	76	0	0.00	48	4	7.69
CEP290	0	genome.wustl.edu	37	12	88522769	88522769	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	88522769	88522769	T	C	SNP	CEP290	ENST00000309041	human	ensembl	74_37	-1	known	missense	c.896	p.D299G	1.000	NULL	NULL	-	no_errors	CEP290	HGNC	ENSG00000198707	tier1	-	-	173	0	0.00	136	85	38.29
CERCAM	0	genome.wustl.edu	37	9	131186799	131186800	+	Frame_Shift_Ins	INS	-	-	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	9	131186799	131186800	-	G	INS	CERCAM	ENST00000372838	human	ensembl	74_37	+1	known	frame_shift_ins	c.672_673	p.A225fs	0.996:0.989	NULL	pfam_Glyco_trans_25	-	no_errors	CERCAM	HGNC	ENSG00000167123	tier1			31	0	0.00	31	5	13.89
CHEK2P2	0	genome.wustl.edu	37	15	20488873	20488873	+	RNA	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	15	20488873	20488873	C	T	SNP	CHEK2P2	ENST00000555186	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CHEK2P2	HGNC	ENSG00000259156	tier1	-	-	249	0	0.00	191	38	16.59
CHL1	0	genome.wustl.edu	37	3	405013	405013	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	405013	405013	G	T	SNP	CHL1	ENST00000256509	human	ensembl	74_37	+1	known	missense	c.1532	p.W511L	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CHL1	HGNC	ENSG00000134121	tier1	-	-	45	0	0.00	45	4	8.16
CLCN6	0	genome.wustl.edu	37	1	11894293	11894293	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	1	11894293	11894293	C	T	SNP	CLCN6	ENST00000346436	human	ensembl	74_37	+1	known	silent	c.1527	p.S509	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-6	-	no_errors	CLCN6	HGNC	ENSG00000011021	tier1	-	-	30	0	0.00	24	17	41.46
CLSTN3	0	genome.wustl.edu	37	12	7310144	7310144	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	7310144	7310144	G	A	SNP	CLSTN3	ENST00000266546	human	ensembl	74_37	+1	known	missense	c.2587	p.V863I	1.000	NULL	pfam_Cadherin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CLSTN3	HGNC	ENSG00000139182				28	0	0.00	59	4	6.35
CLVS2	0	genome.wustl.edu	37	6	123377007	123377007	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	6	123377007	123377007	C	T	SNP	CLVS2	ENST00000275162	human	ensembl	74_37	+1	known	silent	c.732	p.I244	0.948	pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,prints_CRAL-bd_toc_tran	pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,prints_CRAL-bd_toc_tran	-	no_errors	CLVS2	HGNC	ENSG00000146352	tier1	-	-	33	0	0.00	48	16	25.00
CMYA5	0	genome.wustl.edu	37	5	79029332	79029332	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	79029332	79029332	C	T	SNP	CMYA5	ENST00000446378	human	ensembl	74_37	+1	known	missense	c.4744	p.P1582S	0.000	NULL	pfam_Fibronectin_type3,pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3	-	no_errors	CMYA5	HGNC	ENSG00000164309				38	0	0.00	29	2	6.45
CNOT4	0	genome.wustl.edu	37	7	135079021	135079021	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	7	135079021	135079021	G	C	SNP	CNOT4	ENST00000541284	human	ensembl	74_37	-1	known	missense	c.1276	p.Q426E	1.000	NULL	pfam_RRM_dom,smart_RRM_dom_euk,pfscan_Znf_RING,pfscan_RRM_dom	-	no_errors	CNOT4	HGNC	ENSG00000080802	tier1	-	-	91	0	0.00	56	20	26.32
CNTNAP3	0	genome.wustl.edu	37	9	39174372	39174372	+	RNA	SNP	T	T	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	9	39174372	39174372	T	A	SNP	CNTNAP3	ENST00000377653	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.776	-	-	-	no_errors	CNTNAP3	HGNC	ENSG00000106714	tier1	rs200822754	-	39	0	0.00	48	5	9.43
COL6A3	0	genome.wustl.edu	37	2	238253432	238253432	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	2	238253432	238253432	G	T	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	missense	c.7229	p.S2410Y	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359				49	0	0.00	37	2	5.13
CPOX	0	genome.wustl.edu	37	3	98311880	98311880	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	98311880	98311880	G	C	SNP	CPOX	ENST00000264193	human	ensembl	74_37	-1	known	missense	c.469	p.L157V	0.999	pfam_Coprogen_oxidase_aer,superfamily_Coprogen_oxidase_aer	pfam_Coprogen_oxidase_aer,superfamily_Coprogen_oxidase_aer,prints_Coprogen_oxidase_aer	-	no_errors	CPOX	HGNC	ENSG00000080819	tier1	-	-	67	0	0.00	153	27	15.00
CTNND2	0	genome.wustl.edu	37	5	10981940	10981940	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	10981940	10981940	G	T	SNP	CTNND2	ENST00000304623	human	ensembl	74_37	-1	known	nonsense	c.3362	p.S1121*	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	CTNND2	HGNC	ENSG00000169862	tier1	-	-	56	0	0.00	46	4	8.00
CTTN	0	genome.wustl.edu	37	11	70281137	70281137	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	70281137	70281137	G	A	SNP	CTTN	ENST00000301843	human	ensembl	74_37	+1	known	missense	c.1522	p.D508N	1.000	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_p67phox	pfam_Hs1_Cortactin,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_Hs1_Cortactin,pfscan_SH3_domain,prints_SH3_domain,prints_p67phox	-	no_errors	CTTN	HGNC	ENSG00000085733	tier1	-	-	48	0	0.00	469	58	10.98
CYP2W1	0	genome.wustl.edu	37	7	1024635	1024635	+	Silent	SNP	G	G	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	7	1024635	1024635	G	C	SNP	CYP2W1	ENST00000308919	human	ensembl	74_37	+1	known	silent	c.387	p.T129	0.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP2W1	HGNC	ENSG00000073067	tier1	-	-	67	0	0.00	47	38	44.71
DCLRE1C	0	genome.wustl.edu	37	10	14951315	14951315	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	14951315	14951315	A	G	SNP	DCLRE1C	ENST00000378278	human	ensembl	74_37	-1	known	missense	c.1171	p.Y391H	0.313	NULL	pfam_DRMBL	-	no_errors	DCLRE1C	HGNC	ENSG00000152457	tier1	-	-	36	0	0.00	57	4	6.56
DENND1C	0	genome.wustl.edu	37	19	6475721	6475721	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	6475721	6475721	G	T	SNP	DENND1C	ENST00000381480	human	ensembl	74_37	-1	known	missense	c.821	p.A274D	0.059	pfam_DENN_dom,smart_DENN_dom,pfscan_DENN_dom	pfam_DENN_dom,pfam_uDENN_dom,pfam_dDENN_dom,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom	-	no_errors	DENND1C	HGNC	ENSG00000205744				31	0	0.00	75	4	5.06
DHX30	0	genome.wustl.edu	37	3	47889696	47889696	+	Silent	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	47889696	47889696	A	G	SNP	DHX30	ENST00000445061	human	ensembl	74_37	+1	known	silent	c.2313	p.V771	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_DUF1605,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX30	HGNC	ENSG00000132153				53	0	0.00	41	6	12.77
DISC1	0	genome.wustl.edu	37	1	231906770	231906770	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	1	231906770	231906770	G	T	SNP	DISC1	ENST00000439617	human	ensembl	74_37	+1	known	missense	c.1588	p.A530S	0.166	superfamily_Prefoldin	superfamily_Prefoldin	-	no_errors	DISC1	HGNC	ENSG00000162946				49	0	0.00	68	4	5.56
DNAAF1	0	genome.wustl.edu	37	16	84209698	84209698	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	16	84209698	84209698	C	T	SNP	DNAAF1	ENST00000378553	human	ensembl	74_37	+1	known	missense	c.1858	p.P620S	0.044	NULL	NULL	-	no_errors	DNAAF1	HGNC	ENSG00000154099				45	0	0.00	66	5	7.04
DOCK1	0	genome.wustl.edu	37	10	129216786	129216786	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	129216786	129216786	G	T	SNP	DOCK1	ENST00000280333	human	ensembl	74_37	+1	known	missense	c.4610	p.G1537V	1.000	pfam_DOCK_C,superfamily_Cyt_c-like_dom	pfam_DOCK_C,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,superfamily_Cyt_c-like_dom,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK1	HGNC	ENSG00000150760	tier1	-	-	37	0	0.00	29	4	12.12
DOCK2	0	genome.wustl.edu	37	5	169507216	169507216	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	169507216	169507216	C	T	SNP	DOCK2	ENST00000256935	human	ensembl	74_37	+1	known	missense	c.5216	p.A1739V	0.000	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Cyt_c-like_dom,superfamily_ARM-type_fold,superfamily_Ferritin-like_SF,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK2	HGNC	ENSG00000134516				53	0	0.00	56	4	6.67
DOT1L	0	genome.wustl.edu	37	19	2217008	2217008	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	2217008	2217008	C	T	SNP	DOT1L	ENST00000398665	human	ensembl	74_37	+1	known	silent	c.2463	p.G821	0.114	pirsf_Histone_H3-K79_MeTrfase_met	pfam_DOT1,pirsf_Histone_H3-K79_MeTrfase_met	-	no_errors	DOT1L	HGNC	ENSG00000104885				49	0	0.00	68	4	5.48
DPP6	0	genome.wustl.edu	37	7	153750014	153750014	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	7	153750014	153750014	G	A	SNP	DPP6	ENST00000377770	human	ensembl	74_37	+1	known	missense	c.109	p.G37S	0.299	NULL	pfam_Peptidase_S9B,pfam_Peptidase_S9,pfam_PD40	-	no_errors	DPP6	HGNC	ENSG00000130226				57	0	0.00	69	6	8.00
DRG1	0	genome.wustl.edu	37	22	31795658	31795658	+	RNA	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	22	31795658	31795658	G	T	SNP	DRG1	ENST00000433341	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	DRG1	HGNC	ENSG00000185721	tier1	-	-	41	0	0.00	76	18	19.15
DSG2	0	genome.wustl.edu	37	18	29099820	29099820	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	18	29099820	29099820	C	T	SNP	DSG2	ENST00000261590	human	ensembl	74_37	+1	known	missense	c.136	p.R46W	0.195	NULL	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Desmoglein,prints_Desmosomal_cadherin	-	no_errors	DSG2	HGNC	ENSG00000046604				67	0	0.00	56	3	5.08
DYX1C1	0	genome.wustl.edu	37	15	55759242	55759242	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	15	55759242	55759242	T	-	DEL	DYX1C1	ENST00000321149	human	ensembl	74_37	-1	known	frame_shift_del	c.523	p.I175fs	0.001	superfamily_HSP20-like_chaperone	pfam_TPR_1,pfam_CS_dom,superfamily_HSP20-like_chaperone,smart_TPR_repeat,pfscan_CS_dom,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	DYX1C1	HGNC	ENSG00000256061	tier1			36	0	0.00	35	5	12.50
ELF1	0	genome.wustl.edu	37	13	41517266	41517266	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	13	41517266	41517266	G	T	SNP	ELF1	ENST00000239882	human	ensembl	74_37	-1	known	missense	c.628	p.L210I	1.000	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	pfam_TF_Elf_N,pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	ELF1	HGNC	ENSG00000120690				86	0	0.00	72	4	5.26
ENSG00000188002	0	genome.wustl.edu	37	5	1602846	1602846	+	RNA	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	1602846	1602846	C	T	SNP	ENSG00000188002	ENST00000507290	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.974	-	-	-	no_errors	RP11-43F13.1	Clone_based_vega_gene	ENSG00000188002	tier1	-	-	36	0	0.00	33	17	34.00
ENSG00000244306	0	genome.wustl.edu	37	14	19856850	19856850	+	RNA	SNP	T	T	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	14	19856850	19856850	T	G	SNP	ENSG00000244306	ENST00000551334	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306	tier1	-	-	87	0	0.00	43	23	34.85
ENSG00000259407	0	genome.wustl.edu	37	15	86287707	86287707	+	RNA	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	15	86287707	86287707	A	G	SNP	ENSG00000259407	ENST00000558375	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-158M2.3	Clone_based_vega_gene	ENSG00000259407	tier1	-	-	25	0	0.00	5	12	70.59
EPN3	0	genome.wustl.edu	37	17	48618874	48618874	+	Silent	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	17	48618874	48618874	G	T	SNP	EPN3	ENST00000537145	human	ensembl	74_37	+1	known	silent	c.1488	p.T496	0.000	NULL	pfam_Epsin_dom_N,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN3	HGNC	ENSG00000049283				40	0	0.00	50	3	5.66
ERP27	0	genome.wustl.edu	37	12	15068681	15068681	+	RNA	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	15068681	15068681	G	T	SNP	ERP27	ENST00000544881	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	ERP27	HGNC	ENSG00000139055	tier1	-	-	32	0	0.00	38	37	49.33
EXT1	0	genome.wustl.edu	37	8	118812031	118812031	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	8	118812031	118812031	G	T	SNP	EXT1	ENST00000378204	human	ensembl	74_37	-1	known	missense	c.2161	p.Q721K	1.000	pfam_HexNAc_Trfase_a	pfam_HexNAc_Trfase_a,pfam_Exostosin	-	no_errors	EXT1	HGNC	ENSG00000182197				23	0	0.00	44	4	8.33
EYS	0	genome.wustl.edu	37	6	65301788	65301788	+	Silent	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	6	65301788	65301788	G	T	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	silent	c.3972	p.L1324	0.000	NULL	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	tier1	-	-	39	0	0.00	48	4	7.69
F8	0	genome.wustl.edu	37	X	154157686	154157686	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	X	154157686	154157686	T	-	DEL	F8	ENST00000360256	human	ensembl	74_37	-1	known	frame_shift_del	c.4379	p.N1460fs	0.012	NULL	pfam_Coagulation_fac_5/8-C_type_dom,pfam_Cu-oxidase_3,pfam_Cu-oxidase_2,superfamily_Galactose-bd-like,superfamily_Cupredoxin,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	F8	HGNC	ENSG00000185010	tier1			41	0	0.00	38	5	11.63
FAIM2	0	genome.wustl.edu	37	12	50282986	50282986	+	Splice_Site	SNP	C	C	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	50282986	50282986	C	G	SNP	FAIM2	ENST00000320634	human	ensembl	74_37	-1	known	splice_site	c.652-1	e10-1	1.000	-	-	-	no_errors	FAIM2	HGNC	ENSG00000135472				26	0	0.00	23	3	11.54
FAM227A	0	genome.wustl.edu	37	22	38995862	38995862	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	22	38995862	38995862	G	T	SNP	FAM227A	ENST00000406767	human	ensembl	74_37	-1	known	missense	c.1271	p.P424H	0.998	NULL	superfamily_Staphylcoagulase_N	-	no_errors	FAM227A	HGNC	ENSG00000184949	tier1	-	-	31	0	0.00	45	4	8.16
FAM230A	0	genome.wustl.edu	37	22	20710075	20710075	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	22	20710075	20710075	A	G	SNP	FAM230A	ENST00000434783	human	ensembl	74_37	+1	known	missense	c.1807	p.R603G	0.000	superfamily_Kinase-like_dom	pfam_Ret-finger_pr-like_3_antisense,superfamily_Kinase-like_dom	-	no_errors	FAM230A	HGNC	ENSG00000188280	tier1	-	-	54	0	0.00	86	27	23.89
FAM230A	0	genome.wustl.edu	37	22	20710105	20710105	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	22	20710105	20710105	A	T	SNP	FAM230A	ENST00000434783	human	ensembl	74_37	+1	known	missense	c.1837	p.T613S	0.237	superfamily_Kinase-like_dom	pfam_Ret-finger_pr-like_3_antisense,superfamily_Kinase-like_dom	-	no_errors	FAM230A	HGNC	ENSG00000188280	tier1	-	-	60	0	0.00	85	16	15.84
FANCM	0	genome.wustl.edu	37	14	45667962	45667962	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	14	45667962	45667962	G	C	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	missense	c.5832	p.L1944F	1.000	superfamily_Restrct_endonuc-II-like	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790	tier1	-	-	67	0	0.00	52	17	24.29
FAT1	0	genome.wustl.edu	37	4	187628047	187628047	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	4	187628047	187628047	G	T	SNP	FAT1	ENST00000441802	human	ensembl	74_37	-1	known	missense	c.2935	p.L979I	0.998	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,prints_Cadherin,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin	-	no_errors	FAT1	HGNC	ENSG00000083857				42	0	0.00	44	4	8.33
FAT2	0	genome.wustl.edu	37	5	150924003	150924003	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	150924003	150924003	C	A	SNP	FAT2	ENST00000261800	human	ensembl	74_37	-1	known	missense	c.6685	p.G2229W	0.912	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT2	HGNC	ENSG00000086570	tier1	-	-	67	0	0.00	51	4	7.27
FBXW2	0	genome.wustl.edu	37	9	123538400	123538400	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	9	123538400	123538400	G	T	SNP	FBXW2	ENST00000608872	human	ensembl	74_37	-1	known	missense	c.790	p.L264I	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_F-box_dom,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_F-box_dom,smart_WD40_repeat,pfscan_F-box_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	FBXW2	HGNC	ENSG00000119402	tier1	-	-	50	0	0.00	51	4	7.27
FGF9	0	genome.wustl.edu	37	13	22275604	22275604	+	RNA	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	13	22275604	22275604	A	G	SNP	FGF9	ENST00000478546	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FGF9	HGNC	ENSG00000102678	tier1	-	-	40	0	0.00	26	21	44.68
FNBP1	0	genome.wustl.edu	37	9	132687355	132687355	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	9	132687355	132687355	T	C	SNP	FNBP1	ENST00000446176	human	ensembl	74_37	-1	known	missense	c.871	p.M291V	0.998	NULL	pfam_FCH_dom,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,superfamily_Ribosomal_S20,superfamily_HR1_rho-bd,smart_FCH_dom,smart_SH3_domain,pfscan_FCH_dom,pfscan_SH3_domain	-	no_errors	FNBP1	HGNC	ENSG00000187239	tier1	-	-	62	0	0.00	28	43	60.56
FOXK1	0	genome.wustl.edu	37	7	4798961	4798961	+	Silent	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	7	4798961	4798961	G	A	SNP	FOXK1	ENST00000328914	human	ensembl	74_37	+1	known	silent	c.1431	p.Q477	1.000	NULL	pfam_TF_fork_head,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,smart_TF_fork_head,pfscan_FHA_dom,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXK1	HGNC	ENSG00000164916	tier1	-	-	21	0	0.00	39	22	36.07
FSTL5	0	genome.wustl.edu	37	4	162307332	162307332	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	4	162307332	162307332	T	A	SNP	FSTL5	ENST00000306100	human	ensembl	74_37	-1	known	missense	c.2111	p.H704L	1.000	NULL	pfam_Ig_I-set,pfam_Kazal_dom,pfam_Ig_V-set,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL5	HGNC	ENSG00000168843	tier1	-	-	31	0	0.00	21	20	48.78
GABRA2	0	genome.wustl.edu	37	4	46252353	46252353	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	4	46252353	46252353	C	T	SNP	GABRA2	ENST00000540012	human	ensembl	74_37	-1	known	missense	c.1343	p.R448K	1.000	superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa2_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	GABRA2	HGNC	ENSG00000151834	tier1	rs200987678	-	72	0	0.00	42	8	16.00
GALNT15	0	genome.wustl.edu	37	3	16250103	16250103	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	16250103	16250103	G	A	SNP	GALNT15	ENST00000339732	human	ensembl	74_37	+1	known	nonsense	c.1005	p.W335*	1.000	pfam_Glyco_trans_2	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT15	HGNC	ENSG00000131386	tier1	-	-	124	0	0.00	78	31	28.44
GOLGA8R	0	genome.wustl.edu	37	15	30699678	30699678	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	15	30699678	30699678	G	C	SNP	GOLGA8R	ENST00000544495	human	ensembl	74_37	-1	known	missense	c.451	p.L151V	0.988	NULL	NULL	-	no_errors	GOLGA8R	HGNC	ENSG00000186399	tier1	-	-	8	0	0.00	5	8	61.54
GRIK4	0	genome.wustl.edu	37	11	120831696	120831696	+	Silent	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	120831696	120831696	G	T	SNP	GRIK4	ENST00000527524	human	ensembl	74_37	+1	known	silent	c.1953	p.V651	1.000	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,smart_Iontro_glu_rcpt	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK4	HGNC	ENSG00000149403	tier1	-	-	52	0	0.00	45	4	8.16
GRIN3B	0	genome.wustl.edu	37	19	1004830	1004830	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	1004830	1004830	C	T	SNP	GRIN3B	ENST00000234389	human	ensembl	74_37	+1	known	silent	c.1330	p.L444	1.000	NULL	pfam_Iontro_glu_rcpt,pfam_SBP_bac_3,pfam_Glu_rcpt_Glu/Gly-bd,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIN3B	HGNC	ENSG00000116032	tier1	-	-	36	0	0.00	36	4	10.00
HAUS4	0	genome.wustl.edu	37	14	23417087	23417087	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	14	23417087	23417087	G	A	SNP	HAUS4	ENST00000206474	human	ensembl	74_37	-1	known	missense	c.698	p.A233V	0.999	NULL	NULL	-	no_errors	HAUS4	HGNC	ENSG00000092036	tier1	-	-	28	0	0.00	32	20	38.46
HBP1	0	genome.wustl.edu	37	7	106836591	106836591	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	7	106836591	106836591	T	A	SNP	HBP1	ENST00000222574	human	ensembl	74_37	+1	known	missense	c.1380	p.D460E	1.000	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_Ataxin-1_HBP1,pfam_HMG_box_dom,superfamily_Ataxin-1_HBP1,superfamily_HMG_box_dom,smart_Ataxin_AXH_dom,smart_HMG_box_dom,pfscan_Ataxin-1_HBP1,pfscan_HMG_box_dom	-	no_errors	HBP1	HGNC	ENSG00000105856	tier1	-	-	47	0	0.00	49	16	24.62
HBP1	0	genome.wustl.edu	37	7	106836593	106836593	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	7	106836593	106836593	A	G	SNP	HBP1	ENST00000222574	human	ensembl	74_37	+1	known	missense	c.1382	p.N461S	1.000	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_Ataxin-1_HBP1,pfam_HMG_box_dom,superfamily_Ataxin-1_HBP1,superfamily_HMG_box_dom,smart_Ataxin_AXH_dom,smart_HMG_box_dom,pfscan_Ataxin-1_HBP1,pfscan_HMG_box_dom	-	no_errors	HBP1	HGNC	ENSG00000105856	tier1	-	-	47	0	0.00	47	16	25.40
HECTD2	0	genome.wustl.edu	37	10	93250956	93250956	+	Splice_Site	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	93250956	93250956	G	A	SNP	HECTD2	ENST00000446394	human	ensembl	74_37	+1	known	splice_site	c.1204-1	e13-1	1.000	-	-	-	no_errors	HECTD2	HGNC	ENSG00000165338				135	0	0.00	60	4	6.25
HECTD4	0	genome.wustl.edu	37	12	112688861	112688861	+	Silent	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	112688861	112688861	G	T	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	silent	c.3114	p.S1038	1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064				66	0	0.00	75	4	5.06
HIF1A	0	genome.wustl.edu	37	14	62200949	62200949	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	14	62200949	62200949	A	T	SNP	HIF1A	ENST00000539097	human	ensembl	74_37	+1	known	missense	c.1046	p.Y349F	1.000	pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,smart_PAC,tigrfam_PAS	pfam_PAS_fold_3,pfam_HIF-1_TAD_C,pfam_HIF_alpha_subunit,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,prints_HIF-1_alpha,pfscan_PAS,pfscan_bHLH_dom,tigrfam_PAS	-	no_errors	HIF1A	HGNC	ENSG00000100644	tier1	-	-	98	0	0.00	45	42	48.28
HIF1AN	0	genome.wustl.edu	37	10	102304740	102304740	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	102304740	102304740	C	A	SNP	HIF1AN	ENST00000299163	human	ensembl	74_37	+1	known	missense	c.610	p.Q204K	1.000	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	HIF1AN	HGNC	ENSG00000166135	tier1	-	-	44	0	0.00	40	4	9.09
HMBOX1	0	genome.wustl.edu	37	8	28906830	28906832	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	8	28906830	28906832	GGA	-	DEL	HMBOX1	ENST00000444075	human	ensembl	74_37	+1	known	in_frame_del	c.1146_1148	p.E386in_frame_del	1.000:1.000:1.000	NULL	pfam_HNF-1_N,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	HMBOX1	HGNC	ENSG00000147421	tier1			36	0	0.00	42	5	10.64
HRCT1	0	genome.wustl.edu	37	9	35906348	35906350	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	9	35906348	35906350	CTG	-	DEL	HRCT1	ENST00000354323	human	ensembl	74_37	+1	known	in_frame_del	c.64_66	p.L25in_frame_del	0.168:0.493:0.516	NULL	NULL	-	no_errors	HRCT1	HGNC	ENSG00000196196	tier1			47	0	0.00	53	6	10.17
HTRA1	0	genome.wustl.edu	37	10	124248966	124248966	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	124248966	124248966	G	T	SNP	HTRA1	ENST00000368984	human	ensembl	74_37	+1	known	missense	c.601	p.V201L	1.000	superfamily_Trypsin-like_Pept_dom	pfam_Peptidase_S1,pfam_PDZ,pfam_Kazal_dom,pfam_IGFBP-like,superfamily_Trypsin-like_Pept_dom,superfamily_PDZ,smart_IGFBP-like,smart_Kazal_dom,smart_PDZ,pfscan_PDZ,prints_Peptidase_S1C	-	no_errors	HTRA1	HGNC	ENSG00000166033				75	0	0.00	58	4	6.45
HYDIN	0	genome.wustl.edu	37	16	71061539	71061539	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	16	71061539	71061539	T	C	SNP	HYDIN	ENST00000448089	human	ensembl	74_37	-1	known	missense	c.3008	p.D1003G	0.998	NULL	superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	26	0	0.00	20	5	20.00
IHH	0	genome.wustl.edu	37	2	219920344	219920344	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	2	219920344	219920344	G	T	SNP	IHH	ENST00000295731	human	ensembl	74_37	-1	known	missense	c.821	p.A274D	1.000	pirsf_Hedgehog,pfam_Hint_dom,smart_Hint_dom_N,prints_Hedgehog,pfscan_Intein_splice_site	pirsf_Hedgehog,pfam_Hedgehog_signaling_dom,pfam_Hint_dom,superfamily_Hedgehog_sig/DD-Pept_Zn-bd_dom,smart_Hint_dom_N,smart_Hint_dom_C,prints_Hedgehog,pfscan_Intein_splice_site	-	no_errors	IHH	HGNC	ENSG00000163501	tier1	-	-	63	0	0.00	91	5	5.21
IL15	0	genome.wustl.edu	37	4	142651093	142651093	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	4	142651093	142651093	G	C	SNP	IL15	ENST00000296545	human	ensembl	74_37	+1	known	missense	c.334	p.E112Q	0.033	pfam_IL-15/IL-21_fam	pfam_IL-15/IL-21_fam,prints_IL-15_mml,prints_IL-15	-	no_errors	IL15	HGNC	ENSG00000164136	tier1	-	-	68	0	0.00	71	13	15.48
ING4	0	genome.wustl.edu	37	12	6772257	6772257	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	6772257	6772257	C	T	SNP	ING4	ENST00000396807	human	ensembl	74_37	-1	known	missense	c.11	p.G4E	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	ING4	HGNC	ENSG00000111653	tier1	-	-	52	0	0.00	43	20	31.75
IQCF3	0	genome.wustl.edu	37	3	51863474	51863474	+	RNA	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	51863474	51863474	G	T	SNP	IQCF3	ENST00000472485	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.264	-	-	-	no_errors	IQCF3	HGNC	ENSG00000229972	tier1	-	-	35	0	0.00	32	4	11.11
IRS1	0	genome.wustl.edu	37	2	227661396	227661398	+	In_Frame_Del	DEL	TGC	TGC	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	TGC	TGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	2	227661396	227661398	TGC	-	DEL	IRS1	ENST00000305123	human	ensembl	74_37	-1	known	in_frame_del	c.2059_2057	p.S686in_frame_del	0.115:0.543:0.508	NULL	pfam_Insln_rcpt_S1,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,prints_Insln_rcpt_S1,pfscan_Pleckstrin_homology,pfscan_Insln_rcpt_S1	-	no_errors	IRS1	HGNC	ENSG00000169047	tier1			61	0	0.00	42	6	12.50
JMY	0	genome.wustl.edu	37	5	78620819	78620819	+	RNA	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	78620819	78620819	G	T	SNP	JMY	ENST00000412001	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	JMY	HGNC	ENSG00000152409	tier1	-	-	89	0	0.00	54	4	6.90
KANK1	0	genome.wustl.edu	37	9	712709	712709	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	9	712709	712709	G	A	SNP	KANK1	ENST00000382297	human	ensembl	74_37	+1	known	missense	c.1943	p.R648Q	0.898	NULL	pfam_Ankyrin_rpt,pfam_KN_motif,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	KANK1	HGNC	ENSG00000107104	tier1	-	-	24	0	0.00	6	17	73.91
KCNJ5	0	genome.wustl.edu	37	11	128786561	128786561	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	128786561	128786561	G	T	SNP	KCNJ5	ENST00000529694	human	ensembl	74_37	+1	known	nonsense	c.1195	p.E399*	0.998	pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.4	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir3.4	-	no_errors	KCNJ5	HGNC	ENSG00000120457	tier1	-	-	52	0	0.00	52	4	7.14
KCNU1	0	genome.wustl.edu	37	8	36721957	36721957	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	8	36721957	36721957	G	T	SNP	KCNU1	ENST00000399881	human	ensembl	74_37	+1	known	nonsense	c.1927	p.G643*	0.000	NULL	pfam_K_chnl_Ca-activ_BK_asu,pfam_2pore_dom_K_chnl_dom,prints_K_chnl_Ca-activ_BK_asu	-	no_errors	KCNU1	HGNC	ENSG00000215262	tier1	-	-	52	0	0.00	71	4	5.33
KIF26B	0	genome.wustl.edu	37	1	245850736	245850736	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	1	245850736	245850736	C	T	SNP	KIF26B	ENST00000407071	human	ensembl	74_37	+1	known	missense	c.4451	p.P1484L	0.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF26B	HGNC	ENSG00000162849	tier1	-	-	18	0	0.00	9	25	73.53
KIF5A	0	genome.wustl.edu	37	12	57972061	57972061	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	57972061	57972061	C	A	SNP	KIF5A	ENST00000455537	human	ensembl	74_37	+1	known	missense	c.2474	p.S825Y	1.000	superfamily_Prefoldin	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF5A	HGNC	ENSG00000155980	tier1	-	-	69	0	0.00	52	4	7.14
KLHL30	0	genome.wustl.edu	37	2	239049954	239049954	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	2	239049954	239049954	C	T	SNP	KLHL30	ENST00000409223	human	ensembl	74_37	+1	known	silent	c.559	p.L187	1.000	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL30	HGNC	ENSG00000168427				52	0	0.00	44	4	8.33
KMT2D	0	genome.wustl.edu	37	12	49428677	49428678	+	Frame_Shift_Ins	INS	-	-	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	49428677	49428678	-	A	INS	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	frame_shift_ins	c.10273_10272	p.A3424fs	1.000:1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548	tier1			40	0	0.00	35	14	28.57
KRTAP13-3	0	genome.wustl.edu	37	21	31797973	31797973	+	Silent	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	21	31797973	31797973	G	A	SNP	KRTAP13-3	ENST00000390690	human	ensembl	74_37	-1	known	silent	c.258	p.H86	0.000	pfam_KRTAP_PMG	pfam_KRTAP_PMG	-	no_errors	KRTAP13-3	HGNC	ENSG00000240432	tier1	-	-	56	0	0.00	41	20	32.79
L3HYPDH	0	genome.wustl.edu	37	14	59945904	59945904	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	14	59945904	59945904	G	T	SNP	L3HYPDH	ENST00000247194	human	ensembl	74_37	-1	known	missense	c.674	p.A225D	1.000	pfam_Pro_racemase_fam,pirsf_Pro_racemase_fam	pfam_Pro_racemase_fam,pirsf_Pro_racemase_fam	-	no_errors	L3HYPDH	HGNC	ENSG00000126790				48	0	0.00	64	4	5.88
LAMA5	0	genome.wustl.edu	37	20	60894802	60894802	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	20	60894802	60894802	G	T	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.6809	p.A2270D	0.792	pfam_Laminin_I	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702				14	0	0.00	36	4	10.00
LDLR	0	genome.wustl.edu	37	19	11222249	11222249	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	11222249	11222249	G	T	SNP	LDLR	ENST00000558518	human	ensembl	74_37	+1	known	missense	c.1120	p.G374C	0.949	pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LDLR	HGNC	ENSG00000130164				37	0	0.00	68	4	5.56
LGALS3BP	0	genome.wustl.edu	37	17	76968463	76968480	+	In_Frame_Del	DEL	TCGCTGGGCACCGCCAGG	TCGCTGGGCACCGCCAGG	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	TCGCTGGGCACCGCCAGG	TCGCTGGGCACCGCCAGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	17	76968463	76968480	TCGCTGGGCACCGCCAGG	0	DEL	LGALS3BP	ENST00000262776	human	ensembl	74_37	-1	known	in_frame_del	c.953_936	p.DLAVPS312in_frame_del	0.996:1.000:1.000:1.000:1.000:0.993:0.989:0.952:0.941:0.902:0.724:0.021:0.122:0.961:0.997:0.997:0.986:0.944	pfam_BACK,smart_BACK	pfam_SRCR,pfam_BACK,superfamily_Srcr_rcpt-rel,superfamily_BTB/POZ_fold,smart_Srcr_rcpt-rel,smart_BACK,pfscan_BTB/POZ-like,pfscan_SRCR,prints_SRCR	-	no_errors	LGALS3BP	HGNC	ENSG00000108679				27	0	0.00	66	5	7.04
LHCGR	0	genome.wustl.edu	37	2	48915637	48915637	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	2	48915637	48915637	C	T	SNP	LHCGR	ENST00000294954	human	ensembl	74_37	-1	known	nonsense	c.1299	p.W433*	1.000	pfam_GPCR_Rhodpsn,prints_Gphrmn_rcpt_fam,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,prints_LSH_rcpt,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn,prints_TSH_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	LHCGR	HGNC	ENSG00000138039	tier1	-	-	64	0	0.00	71	4	5.33
LINC00687	0	genome.wustl.edu	37	20	11830171	11830174	+	RNA	DEL	TCTC	TCTC	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	TCTC	TCTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	20	11830171	11830174	TCTC	-	DEL	LINC00687	ENST00000427835	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000:0.000	-	-	-	no_errors	LINC00687	HGNC	ENSG00000228422	tier1			37	0	0.00	32	14	30.43
LOC101930193	0	genome.wustl.edu	37	7	63361328	63361328	+	RNA	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	7	63361328	63361328	G	T	SNP	LOC101930193	ENST00000450544	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-340I6.8	Clone_based_vega_gene	ENSG00000226581	tier1	-	-	8	0	0.00	10	7	41.18
LOC284837	0	genome.wustl.edu	37	21	45232041	45232041	+	RNA	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	21	45232041	45232041	C	T	SNP	LOC284837	ENST00000400385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AP001053.11	Clone_based_vega_gene	ENSG00000215458	tier1	-	-	38	0	0.00	45	17	27.42
LRBA	0	genome.wustl.edu	37	4	151771892	151771892	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	4	151771892	151771892	T	C	SNP	LRBA	ENST00000357115	human	ensembl	74_37	-1	known	missense	c.3988	p.I1330V	1.000	NULL	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom	-	no_errors	LRBA	HGNC	ENSG00000198589	tier1	-	-	38	0	0.00	30	8	21.05
MAGEC1	0	genome.wustl.edu	37	X	140994968	140994968	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	X	140994968	140994968	A	T	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	missense	c.1778	p.H593L	0.015	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	tier1	-	-	74	0	0.00	61	22	26.51
MAGEC1	0	genome.wustl.edu	37	X	140994984	140994984	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	X	140994984	140994984	C	T	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	silent	c.1794	p.S598	0.967	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	tier1	-	-	82	0	0.00	68	14	17.07
MAGEC1	0	genome.wustl.edu	37	X	140994985	140994987	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	X	140994985	140994987	CCT	-	DEL	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	in_frame_del	c.1795_1797	p.P600in_frame_del	0.972:0.982:0.991	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	tier1			81	0	0.00	49	32	39.51
MAGEC1	0	genome.wustl.edu	37	X	140995006	140995006	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	X	140995006	140995006	A	C	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	missense	c.1816	p.M606L	0.064	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	tier1	-	-	79	0	0.00	32	40	55.56
MANBA	0	genome.wustl.edu	37	4	103571709	103571709	+	Silent	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	4	103571709	103571709	G	T	SNP	MANBA	ENST00000226578	human	ensembl	74_37	-1	known	silent	c.1854	p.T618	0.312	superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_2_N,pfam_Glyco_hydro_2_TIM,superfamily_Glycoside_hydrolase_SF,superfamily_Galactose-bd-like,superfamily_Glyco_hydro_2_Ig-like	-	no_errors	MANBA	HGNC	ENSG00000109323	tier1	-	-	76	0	0.00	60	4	6.25
MAP1B	0	genome.wustl.edu	37	5	71479594	71479594	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	71479594	71479594	G	T	SNP	MAP1B	ENST00000296755	human	ensembl	74_37	+1	known	missense	c.311	p.S104I	1.000	NULL	pfam_MAP1B_neuraxin	-	no_errors	MAP1B	HGNC	ENSG00000131711	tier1	-	-	57	0	0.00	57	4	6.56
MAPK1	0	genome.wustl.edu	37	22	22123604	22123604	+	Silent	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	22	22123604	22123604	G	T	SNP	MAPK1	ENST00000215832	human	ensembl	74_37	-1	known	silent	c.972	p.I324	0.015	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_MAPK_ERK1/2,prints_MAPK_ERK3/4	-	no_errors	MAPK1	HGNC	ENSG00000100030	tier1	-	-	89	0	0.00	74	4	5.13
MAPK1IP1L	0	genome.wustl.edu	37	14	55529950	55529950	+	Silent	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	14	55529950	55529950	G	A	SNP	MAPK1IP1L	ENST00000395468	human	ensembl	74_37	+1	known	silent	c.633	p.S211	0.989	NULL	NULL	-	no_errors	MAPK1IP1L	HGNC	ENSG00000168175				31	0	0.00	29	2	6.45
MB21D2	0	genome.wustl.edu	37	3	192635476	192635476	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	192635476	192635476	C	T	SNP	MB21D2	ENST00000392452	human	ensembl	74_37	-1	known	missense	c.154	p.D52N	1.000	NULL	pfam_Mab-21_dom	-	no_errors	MB21D2	HGNC	ENSG00000180611				15	0	0.00	34	4	10.53
MCC	0	genome.wustl.edu	37	5	112824048	112824049	+	In_Frame_Ins	INS	-	-	GCC			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	112824048	112824049	-	GCC	INS	MCC	ENST00000408903	human	ensembl	74_37	-1	putative	in_frame_ins	c.64_63	p.21in_frame_insG	0.854:0.894	NULL	pfam_USH1C-bd_PDZ_domain,superfamily_tRNA-bd_arm,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MCC	HGNC	ENSG00000171444	tier1			14	0	0.00	16	8	33.33
MCM3AP	0	genome.wustl.edu	37	21	47666671	47666671	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	21	47666671	47666671	C	T	SNP	MCM3AP	ENST00000291688	human	ensembl	74_37	-1	known	missense	c.4420	p.V1474M	0.002	NULL	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	-	no_errors	MCM3AP	HGNC	ENSG00000160294	tier1	-	-	34	0	0.00	54	4	6.90
MED12L	0	genome.wustl.edu	37	3	151112592	151112592	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	151112592	151112592	G	T	SNP	MED12L	ENST00000474524	human	ensembl	74_37	+1	known	missense	c.5652	p.K1884N	0.998	pfam_Mediator_Med12_catenin-bd	pfam_Mediator_Med12_LCEWAV,pfam_Mediator_Med12,pfam_Mediator_Med12_catenin-bd	-	no_errors	MED12L	HGNC	ENSG00000144893				29	0	0.00	66	4	5.71
MED15	0	genome.wustl.edu	37	22	20929472	20929472	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	22	20929472	20929472	G	A	SNP	MED15	ENST00000263205	human	ensembl	74_37	+1	known	missense	c.1225	p.A409T	0.352	pfam_Mediator_Med15_met	pfam_Mediator_Med15_met	-	no_errors	MED15	HGNC	ENSG00000099917				40	0	0.00	54	4	6.90
MEGF10	0	genome.wustl.edu	37	5	126780962	126780962	+	RNA	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	126780962	126780962	G	A	SNP	MEGF10	ENST00000510828	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MEGF10	HGNC	ENSG00000145794	tier1	-	-	17	0	0.00	4	14	77.78
MICAL2	0	genome.wustl.edu	37	11	12247737	12247737	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	12247737	12247737	G	T	SNP	MICAL2	ENST00000256194	human	ensembl	74_37	+1	known	nonsense	c.1708	p.E570*	1.000	pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,pfam_FAD_bind_dom,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,prints_Rng_hydrolase-like	-	no_errors	MICAL2	HGNC	ENSG00000133816				33	0	0.00	54	4	6.90
MRPL37	0	genome.wustl.edu	37	1	54670731	54670731	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	1	54670731	54670731	A	G	SNP	MRPL37	ENST00000360840	human	ensembl	74_37	+1	known	missense	c.387	p.I129M	0.979	pfam_Ribosomal_L37/S30	pfam_Ribosomal_L37/S30	-	no_errors	MRPL37	HGNC	ENSG00000116221	tier1	-	-	63	0	0.00	71	4	5.33
MS4A6A	0	genome.wustl.edu	37	11	59939661	59939661	+	Silent	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	59939661	59939661	G	A	SNP	MS4A6A	ENST00000323961	human	ensembl	74_37	-1	known	silent	c.717	p.D239	0.000	NULL	pfam_CD20-like,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MS4A6A	HGNC	ENSG00000110077	tier1	-	-	43	0	0.00	29	21	42.00
MUTYH	0	genome.wustl.edu	37	1	45800071	45800071	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	1	45800071	45800071	G	T	SNP	MUTYH	ENST00000450313	human	ensembl	74_37	-1	known	missense	c.149	p.A50D	0.000	NULL	pfam_HhH-GPD_domain,superfamily_DNA_glycosylase,superfamily_NUDIX_hydrolase_dom-like,smart_HhH-GPD_domain,smart_Endouclease3_FeS-loop_motif	-	no_errors	MUTYH	HGNC	ENSG00000132781				53	0	0.00	44	4	8.33
MVK	0	genome.wustl.edu	37	12	110019329	110019329	+	Silent	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	110019329	110019329	G	T	SNP	MVK	ENST00000228510	human	ensembl	74_37	+1	known	silent	c.501	p.P167	0.018	pfam_GHMP_kinase_N_dom,superfamily_Ribosomal_S5_D2-typ_fold,tigrfam_Mev_gal_kin	pfam_GHMP_kinase_N_dom,pfam_GHMP_kinase_C_dom,superfamily_Ribosomal_S5_D2-typ_fold,prints_Mevalonate/galactokinase,prints_Galkinase,tigrfam_Mev_gal_kin	-	no_errors	MVK	HGNC	ENSG00000110921	tier1	-	-	73	0	0.00	38	28	42.42
NAV1	0	genome.wustl.edu	37	1	201763801	201763801	+	RNA	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	1	201763801	201763801	A	G	SNP	NAV1	ENST00000469130	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	NAV1	HGNC	ENSG00000134369	tier1	-	-	35	0	0.00	29	19	39.58
NCF2	0	genome.wustl.edu	37	1	183543652	183543652	+	Silent	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	1	183543652	183543652	G	T	SNP	NCF2	ENST00000367535	human	ensembl	74_37	-1	known	silent	c.471	p.S157	0.937	NULL	pfam_SH3_domain,pfam_SH3_2,pfam_TPR_1,pfam_OPR_PB1,superfamily_SH3_domain,smart_TPR_repeat,smart_SH3_domain,smart_OPR_PB1,pfscan_SH3_domain,pfscan_TPR_repeat,pfscan_TPR-contain_dom,prints_p67phox,prints_SH3_domain	-	no_errors	NCF2	HGNC	ENSG00000116701	tier1	-	-	44	0	0.00	68	4	5.56
NDUFV3	0	genome.wustl.edu	37	21	44329103	44329103	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	21	44329103	44329103	C	A	SNP	NDUFV3	ENST00000354250	human	ensembl	74_37	+1	known	missense	c.1394	p.S465Y	0.998	NULL	NULL	-	no_errors	NDUFV3	HGNC	ENSG00000160194	tier1	-	-	29	0	0.00	20	16	44.44
NEDD4L	0	genome.wustl.edu	37	18	55983218	55983218	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	18	55983218	55983218	G	C	SNP	NEDD4L	ENST00000400345	human	ensembl	74_37	+1	known	missense	c.302	p.R101P	1.000	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_C2_dom,superfamily_WW_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom,prints_C2_dom	-	no_errors	NEDD4L	HGNC	ENSG00000049759	tier1	-	-	90	0	0.00	49	25	33.78
NEK8	0	genome.wustl.edu	37	17	27062333	27062333	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	17	27062333	27062333	G	T	SNP	NEK8	ENST00000268766	human	ensembl	74_37	+1	known	missense	c.562	p.A188S	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Prot_kinase_dom,pfam_Reg_chr_condens,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_RCC1/BLIP-II,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Reg_chr_condens,pfscan_Prot_kinase_dom,prints_Reg_chr_condens,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NEK8	HGNC	ENSG00000160602	tier1	-	-	53	0	0.00	65	4	5.80
NFE2L2	0	genome.wustl.edu	37	2	178098800	178098800	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	2	178098800	178098800	T	G	SNP	NFE2L2	ENST00000397062	human	ensembl	74_37	-1	known	missense	c.245	p.E82A	1.000	NULL	pfam_bZIP,superfamily_TF_DNA-bd,superfamily_Serpin_dom,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2L2	HGNC	ENSG00000116044	tier1	-	-	76	0	0.00	45	103	69.59
NFKBID	0	genome.wustl.edu	37	19	36387648	36387648	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	36387648	36387648	T	C	SNP	NFKBID	ENST00000352614	human	ensembl	74_37	-1	known	missense	c.694	p.I232V	0.998	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	NFKBID	HGNC	ENSG00000167604	tier1	-	-	51	0	0.00	37	18	32.73
NPNT	0	genome.wustl.edu	37	4	106861271	106861271	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	4	106861271	106861271	G	T	SNP	NPNT	ENST00000379987	human	ensembl	74_37	+1	known	missense	c.545	p.R182I	0.238	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_MAM_dom,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_MAM_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	NPNT	HGNC	ENSG00000168743	tier1	-	-	51	0	0.00	51	4	7.27
NR1H2	0	genome.wustl.edu	37	19	50881825	50881825	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	50881825	50881825	G	A	SNP	NR1H2	ENST00000593532	human	ensembl	74_37	+1	known	missense	c.392	p.S131N	1.000	NULL	pfam_Znf_hrmn_rcpt,smart_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR1H2	HGNC	ENSG00000131408				21	0	0.00	62	13	17.11
NSD1	0	genome.wustl.edu	37	5	176722172	176722172	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	176722172	176722172	G	T	SNP	NSD1	ENST00000439151	human	ensembl	74_37	+1	known	missense	c.7803	p.R2601S	1.000	NULL	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	NSD1	HGNC	ENSG00000165671				53	0	0.00	64	4	5.80
OAT	0	genome.wustl.edu	37	10	126094158	126094158	+	RNA	SNP	T	T	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	126094158	126094158	T	G	SNP	OAT	ENST00000483711	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.074	-	-	-	no_errors	OAT	HGNC	ENSG00000065154	tier1	-	-	52	0	0.00	33	15	31.25
OBSCN	0	genome.wustl.edu	37	1	228553240	228553240	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	1	228553240	228553240	G	A	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.19042	p.A6348T	0.835	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1	-	-	51	0	0.00	50	4	7.41
OR52N2	0	genome.wustl.edu	37	11	5841692	5841692	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	5841692	5841692	G	T	SNP	OR52N2	ENST00000317037	human	ensembl	74_37	+1	known	missense	c.127	p.G43W	0.799	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR52N2	HGNC	ENSG00000180988				29	0	0.00	44	4	8.33
OR5AS1	0	genome.wustl.edu	37	11	55798389	55798389	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	55798389	55798389	G	T	SNP	OR5AS1	ENST00000313555	human	ensembl	74_37	+1	known	missense	c.495	p.R165S	0.059	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5AS1	HGNC	ENSG00000181785				16	0	0.00	47	4	7.84
OR8H2	0	genome.wustl.edu	37	11	55872693	55872693	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	55872693	55872693	C	G	SNP	OR8H2	ENST00000313503	human	ensembl	74_37	+1	known	missense	c.175	p.P59A	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8H2	HGNC	ENSG00000181767	tier1	-	-	88	0	0.00	92	57	38.26
PAPOLA	0	genome.wustl.edu	37	14	96998989	96998989	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	14	96998989	96998989	A	T	SNP	PAPOLA	ENST00000557320	human	ensembl	74_37	+1	known	missense	c.839	p.Y280F	1.000	NULL	pfam_PolA_pol_cen_dom,pfam_Nucleotidyltransferase	-	no_errors	PAPOLA	HGNC	ENSG00000090060	tier1	-	-	37	0	0.00	41	31	43.06
PCDH1	0	genome.wustl.edu	37	5	141248589	141248589	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	141248589	141248589	G	-	DEL	PCDH1	ENST00000287008	human	ensembl	74_37	-1	known	frame_shift_del	c.448	p.R150fs	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH1	HGNC	ENSG00000156453	tier1			20	0	0.00	22	2	8.33
PCDHA13	0	genome.wustl.edu	37	5	140262071	140262071	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	140262071	140262071	A	G	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	missense	c.218	p.D73G	0.438	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389	tier1	-	-	89	0	0.00	121	44	26.51
PCDHA13	0	genome.wustl.edu	37	5	140263363	140263363	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	140263363	140263363	C	G	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	missense	c.1510	p.L504V	0.982	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389	tier1	-	-	88	0	0.00	120	34	21.94
PCDHA13	0	genome.wustl.edu	37	5	140263450	140263450	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	140263450	140263450	T	G	SNP	PCDHA13	ENST00000289272	human	ensembl	74_37	+1	known	missense	c.1597	p.F533V	0.997	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA13	HGNC	ENSG00000239389	tier1	-	-	108	0	0.00	176	48	21.43
PDGFB	0	genome.wustl.edu	37	22	39621804	39621806	+	In_Frame_Del	DEL	CGG	CGG	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	CGG	CGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	22	39621804	39621806	CGG	-	DEL	PDGFB	ENST00000331163	human	ensembl	74_37	-1	known	in_frame_del	c.650_648	p.R217in_frame_del	1.000:1.000:1.000	NULL	pfam_PDGF/VEGF_dom,pfam_PDGF_N,smart_PDGF/VEGF_dom,pfscan_PDGF/VEGF_dom	-	no_errors	PDGFB	HGNC	ENSG00000100311	tier1			51	0	0.00	37	7	15.91
PDLIM2	0	genome.wustl.edu	37	8	22439044	22439044	+	Splice_Site	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	8	22439044	22439044	G	T	SNP	PDLIM2	ENST00000308354	human	ensembl	74_37	+1	known	splice_site	c.995+1	e3+1	1.000	-	-	-	no_errors	PDLIM2	HGNC	ENSG00000120913	tier1	-	-	45	0	0.00	33	4	10.81
PDZD9	0	genome.wustl.edu	37	16	22007662	22007662	+	Silent	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	16	22007662	22007662	G	A	SNP	PDZD9	ENST00000424898	human	ensembl	74_37	-1	known	silent	c.192	p.N64	0.569	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD9	HGNC	ENSG00000155714	tier1	-	-	62	0	0.00	104	21	16.80
PLS1	0	genome.wustl.edu	37	3	142388241	142388241	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	142388241	142388241	A	G	SNP	PLS1	ENST00000337777	human	ensembl	74_37	+1	known	missense	c.80	p.N27S	1.000	smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_CH-domain,pfam_EF_hand_dom,superfamily_CH-domain,smart_EF_hand_dom,smart_CH-domain,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	PLS1	HGNC	ENSG00000120756	tier1	-	-	41	0	0.00	67	13	16.25
PNPLA8	0	genome.wustl.edu	37	7	108119807	108119807	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	7	108119807	108119807	A	C	SNP	PNPLA8	ENST00000257694	human	ensembl	74_37	-1	known	missense	c.1895	p.L632R	1.000	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase	pfam_Patatin/PLipase_A2-rel,superfamily_Acyl_Trfase/lysoPLipase,superfamily_ARM-type_fold	-	no_errors	PNPLA8	HGNC	ENSG00000135241	tier1	rs144990439	-	37	0	0.00	29	43	58.90
PPME1	0	genome.wustl.edu	37	11	73957080	73957080	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	73957080	73957080	G	A	SNP	PPME1	ENST00000398427	human	ensembl	74_37	+1	novel	missense	c.836	p.G279E	0.016	pirsf_PPase_methylesterase_euk	pirsf_PPase_methylesterase_euk	-	no_errors	PPME1	HGNC	ENSG00000214517	tier1	-	-	64	0	0.00	59	4	6.35
PPP1R16B	0	genome.wustl.edu	37	20	37518295	37518295	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	20	37518295	37518295	C	A	SNP	PPP1R16B	ENST00000299824	human	ensembl	74_37	+1	known	missense	c.308	p.T103K	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R16B	HGNC	ENSG00000101445	tier1	-	-	53	0	0.00	70	4	5.41
PPRC1	0	genome.wustl.edu	37	10	103901420	103901420	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	103901420	103901420	C	T	SNP	PPRC1	ENST00000278070	human	ensembl	74_37	+1	known	missense	c.3155	p.P1052L	0.002	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	PPRC1	HGNC	ENSG00000148840	tier1	-	-	57	0	0.00	36	8	18.18
PRKCSH	0	genome.wustl.edu	37	19	11547294	11547294	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	11547294	11547294	A	G	SNP	PRKCSH	ENST00000252455	human	ensembl	74_37	+1	known	missense	c.164	p.Y55C	1.000	superfamily_LDrepeatLR_classA_rpt	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom,superfamily_LDrepeatLR_classA_rpt,pfscan_EF_hand_dom	-	no_errors	PRKCSH	HGNC	ENSG00000130175	tier1	-	-	32	0	0.00	43	18	29.51
PSIP1	0	genome.wustl.edu	37	9	15472612	15472612	+	RNA	DEL	A	A	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	9	15472612	15472612	A	-	DEL	PSIP1	ENST00000495873	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	PSIP1	HGNC	ENSG00000164985	tier1			36	0	0.00	42	5	10.64
PTPRM	0	genome.wustl.edu	37	18	7955118	7955118	+	Splice_Site	SNP	G	G	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	18	7955118	7955118	G	C	SNP	PTPRM	ENST00000400060	human	ensembl	74_37	+1	known	splice_site	c.839-1	e7-1	1.000	-	-	-	no_errors	PTPRM	HGNC	ENSG00000173482	tier1	-	-	15	0	0.00	8	9	52.94
PTPRO	0	genome.wustl.edu	37	12	15654736	15654736	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	15654736	15654736	G	A	SNP	PTPRO	ENST00000281171	human	ensembl	74_37	+1	known	missense	c.844	p.G282S	0.981	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRO	HGNC	ENSG00000151490	tier1	-	-	93	0	0.00	102	63	38.18
PVRL1	0	genome.wustl.edu	37	11	119549353	119549353	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	119549353	119549353	G	A	SNP	PVRL1	ENST00000264025	human	ensembl	74_37	-1	known	nonsense	c.202	p.Q68*	1.000	pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_CD80_C2-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PVRL1	HGNC	ENSG00000110400	tier1	-	-	30	0	0.00	5	18	78.26
RANBP3L	0	genome.wustl.edu	37	5	36253802	36253802	+	Nonsense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	36253802	36253802	G	A	SNP	RANBP3L	ENST00000296604	human	ensembl	74_37	-1	known	nonsense	c.1114	p.R372*	0.990	pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	-	no_errors	RANBP3L	HGNC	ENSG00000164188	tier1	-	-	91	0	0.00	103	80	43.72
RASAL3	0	genome.wustl.edu	37	19	15571872	15571872	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	15571872	15571872	C	T	SNP	RASAL3	ENST00000343625	human	ensembl	74_37	-1	known	missense	c.605	p.R202Q	1.000	NULL	pfam_RasGAP,superfamily_Rho_GTPase_activation_prot,superfamily_C2_dom,smart_RasGAP,pfscan_RasGAP	-	no_errors	RASAL3	HGNC	ENSG00000105122	tier1	-	-	59	0	0.00	55	44	44.44
RGS12	0	genome.wustl.edu	37	4	3419238	3419238	+	Frame_Shift_Del	DEL	A	A	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	4	3419238	3419238	A	-	DEL	RGS12	ENST00000344733	human	ensembl	74_37	+1	known	frame_shift_del	c.2731	p.K912fs	1.000	NULL	pfam_Raf-like_ras-bd,pfam_RGS_dom,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTB/PI_dom,smart_Regulat_G_prot_signal_superfam,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTB/PI_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS12	HGNC	ENSG00000159788	tier1			67	0	0.00	37	4	9.76
RIC3	0	genome.wustl.edu	37	11	8160038	8160039	+	RNA	INS	-	-	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	8160038	8160039	-	A	INS	RIC3	ENST00000524799	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RIC3	HGNC	ENSG00000166405	tier1			12	0	0.00	9	3	25.00
RNF103	0	genome.wustl.edu	37	2	86831974	86831975	+	Frame_Shift_Ins	INS	-	-	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	2	86831974	86831975	-	A	INS	RNF103	ENST00000237455	human	ensembl	74_37	-1	known	frame_shift_ins	c.1050_1049	p.R352fs	0.588:1.000	NULL	pfam_Znf_C3HC4_RING-type,superfamily_Thioredoxin-like_fold,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF103	HGNC	ENSG00000239305	tier1			62	0	0.00	45	11	19.64
ROCK2	0	genome.wustl.edu	37	2	11332707	11332707	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	2	11332707	11332707	G	T	SNP	ROCK2	ENST00000315872	human	ensembl	74_37	-1	known	missense	c.3819	p.N1273K	1.000	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pirsf_Rho-assoc_coiled-coil_kin,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd	pfam_Prot_kinase_dom,pfam_Rho-bd_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_tRNA-bd_arm,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pirsf_Rho-assoc_coiled-coil_kin,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	ROCK2	HGNC	ENSG00000134318	tier1	-	-	53	0	0.00	73	4	5.13
ROS1	0	genome.wustl.edu	37	6	117715336	117715336	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	6	117715336	117715336	T	G	SNP	ROS1	ENST00000368508	human	ensembl	74_37	-1	known	missense	c.1153	p.M385L	1.000	smart_LDLR_classB_rpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_LDLR_classB_rpt,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	ROS1	HGNC	ENSG00000047936	tier1	-	-	47	0	0.00	48	27	36.00
RP1L1	0	genome.wustl.edu	37	8	10470478	10470478	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	8	10470478	10470478	G	T	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	nonsense	c.1130	p.S377*	0.000	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638				30	0	0.00	21	2	8.70
RPL13P5	0	genome.wustl.edu	37	12	6993766	6993767	+	RNA	INS	-	-	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	6993766	6993767	-	A	INS	RPL13P5	ENST00000412023	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.999:1.000	-	-	-	no_errors	RPL13P5	HGNC	ENSG00000240370	tier1			8	0	0.00	13	4	23.53
RYR3	0	genome.wustl.edu	37	15	34042408	34042408	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	15	34042408	34042408	G	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.8320	p.A2774S	1.000	pfam_Ryanodine_rcpt,superfamily_ARM-type_fold	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	75	0	0.00	66	4	5.71
SCAF1	0	genome.wustl.edu	37	19	50158059	50158059	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	50158059	50158059	G	T	SNP	SCAF1	ENST00000360565	human	ensembl	74_37	+1	known	missense	c.3550	p.G1184W	0.999	NULL	NULL	-	no_errors	SCAF1	HGNC	ENSG00000126461				19	0	0.00	27	3	10.00
SETD2	0	genome.wustl.edu	37	3	47165837	47165837	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	47165837	47165837	G	T	SNP	SETD2	ENST00000409792	human	ensembl	74_37	-1	known	missense	c.289	p.Q97K	1.000	NULL	pfam_SRI,pfam_SET_dom,pfam_WW_dom,superfamily_WW_dom,superfamily_Ferritin-like_SF,smart_AWS,smart_SET_dom,smart_Post-SET_dom,smart_WW_dom,pfscan_AWS,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_WW_dom	-	no_errors	SETD2	HGNC	ENSG00000181555	tier1	-	-	66	0	0.00	61	4	6.15
SH3PXD2A	0	genome.wustl.edu	37	10	105386873	105386873	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	105386873	105386873	C	T	SNP	SH3PXD2A	ENST00000369774	human	ensembl	74_37	-1	known	missense	c.691	p.D231N	0.989	superfamily_SH3_domain	pfam_SH3_domain,pfam_SH3_2,pfam_Phox,superfamily_Phox,superfamily_SH3_domain,smart_Phox,smart_SH3_domain,pfscan_Phox,pfscan_SH3_domain	-	no_errors	SH3PXD2A	HGNC	ENSG00000107957				41	0	0.00	41	3	6.82
SH3TC2	0	genome.wustl.edu	37	5	148407158	148407158	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	148407158	148407158	G	T	SNP	SH3TC2	ENST00000515425	human	ensembl	74_37	-1	known	missense	c.2137	p.L713I	0.988	NULL	pfam_SH3_domain,pfam_TPR_1,superfamily_SH3_domain,smart_SH3_domain,smart_TPR_repeat,pfscan_SH3_domain	-	no_errors	SH3TC2	HGNC	ENSG00000169247				83	0	0.00	55	3	5.17
SIK2	0	genome.wustl.edu	37	11	111558830	111558830	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	111558830	111558830	G	T	SNP	SIK2	ENST00000304987	human	ensembl	74_37	+1	known	missense	c.422	p.R141L	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_SIK1/2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Ser/Thr_kinase_SIK1/2,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	SIK2	HGNC	ENSG00000170145				42	0	0.00	39	4	9.30
SLC1A1	0	genome.wustl.edu	37	9	4585394	4585394	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	9	4585394	4585394	G	T	SNP	SLC1A1	ENST00000262352	human	ensembl	74_37	+1	known	nonsense	c.1411	p.E471*	1.000	NULL	pfam_Na-dicarboxylate_symporter,prints_Na-dicarboxylate_symporter	-	no_errors	SLC1A1	HGNC	ENSG00000106688	tier1	-	-	54	0	0.00	72	4	5.26
SLC25A13	0	genome.wustl.edu	37	7	95799431	95799431	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	7	95799431	95799431	C	A	SNP	SLC25A13	ENST00000416240	human	ensembl	74_37	-1	known	missense	c.1240	p.D414Y	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_EF_hand_dom,pfscan_Mitochondrial_sb/sol_carrier,prints_Mit_carrier	-	no_errors	SLC25A13	HGNC	ENSG00000004864	tier1	-	-	62	0	0.00	81	6	6.90
SLC35E3	0	genome.wustl.edu	37	12	69145879	69145879	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	69145879	69145879	T	C	SNP	SLC35E3	ENST00000398004	human	ensembl	74_37	+1	known	missense	c.581	p.M194T	1.000	pfam_Tpt_PEP_trans_dom,pfam_DMT	pfam_Tpt_PEP_trans_dom,pfam_DMT	-	no_errors	SLC35E3	HGNC	ENSG00000175782	tier1	-	-	74	0	0.00	100	76	43.18
SLC44A4	0	genome.wustl.edu	37	6	31832357	31832357	+	RNA	DEL	A	A	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	6	31832357	31832357	A	-	DEL	SLC44A4	ENST00000487680	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.055	-	-	-	no_errors	SLC44A4	HGNC	ENSG00000204385	tier1			24	0	0.00	26	5	16.13
SLC4A1	0	genome.wustl.edu	37	17	42335486	42335486	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	17	42335486	42335486	G	A	SNP	SLC4A1	ENST00000262418	human	ensembl	74_37	-1	known	missense	c.1150	p.R384C	0.117	pfam_HCO3_transpt_C,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Anion_exchange,prints_Anion_exchange_1,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A1	HGNC	ENSG00000004939	tier1	-	-	32	0	0.00	27	18	40.00
SLC6A3	0	genome.wustl.edu	37	5	1422077	1422077	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	5	1422077	1422077	G	A	SNP	SLC6A3	ENST00000270349	human	ensembl	74_37	-1	known	missense	c.706	p.P236S	0.966	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_dopamine	-	no_errors	SLC6A3	HGNC	ENSG00000142319	tier1	-	-	38	0	0.00	85	27	24.11
SMEK2	0	genome.wustl.edu	37	2	55842612	55842612	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	2	55842612	55842612	G	T	SNP	SMEK2	ENST00000272313	human	ensembl	74_37	-1	known	missense	c.173	p.P58Q	1.000	NULL	pfam_DUF625,superfamily_ARM-type_fold	-	no_errors	SMEK2	HGNC	ENSG00000138041	tier1	-	-	65	0	0.00	50	4	7.41
SMG6	0	genome.wustl.edu	37	17	2196214	2196214	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	17	2196214	2196214	T	C	SNP	SMG6	ENST00000263073	human	ensembl	74_37	-1	known	missense	c.2209	p.R737G	1.000	pfam_EST1	pfam_EST1,smart_PIN_dom	-	no_errors	SMG6	HGNC	ENSG00000070366				32	0	0.00	75	4	5.06
SMOC1	0	genome.wustl.edu	37	14	70477638	70477638	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	14	70477638	70477638	C	T	SNP	SMOC1	ENST00000361956	human	ensembl	74_37	+1	known	missense	c.832	p.R278C	1.000	pfam_Thyroglobulin_1,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	pfam_Thyroglobulin_1,pfam_SPARC/Testican_Ca-bd-dom,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SMOC1	HGNC	ENSG00000198732	tier1	-	-	60	0	0.00	30	25	45.45
SMYD1	0	genome.wustl.edu	37	2	88367423	88367423	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	2	88367423	88367423	G	A	SNP	SMYD1	ENST00000419482	human	ensembl	74_37	+1	known	missense	c.40	p.A14T	0.187	smart_SET_dom	pfam_SET_dom,pfam_Znf_MYND,smart_SET_dom,pfscan_SET_dom,pfscan_Znf_MYND	-	no_errors	SMYD1	HGNC	ENSG00000115593	tier1	-	-	103	0	0.00	139	24	14.72
SND1	0	genome.wustl.edu	37	7	127724828	127724828	+	Frame_Shift_Del	DEL	C	C	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	7	127724828	127724828	C	-	DEL	SND1	ENST00000354725	human	ensembl	74_37	+1	known	frame_shift_del	c.2163	p.P723fs	1.000	pfam_Tudor,pirsf_Silence_cplx_Nase-comp_TudorSN	pfam_Staphylococal_nuclease_OB-fold,pfam_Tudor,superfamily_Staphylococal_nuclease_OB-fold,smart_Staphylococal_nuclease_OB-fold,smart_Tudor,pirsf_Silence_cplx_Nase-comp_TudorSN,pfscan_Tudor,pfscan_Staphylococal_nuclease_OB-fold	-	no_errors	SND1	HGNC	ENSG00000197157	tier1			44	0	0.00	44	3	6.38
SOS2	0	genome.wustl.edu	37	14	50597263	50597263	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	14	50597263	50597263	G	A	SNP	SOS2	ENST00000216373	human	ensembl	74_37	-1	known	missense	c.3293	p.S1098L	1.000	NULL	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Histone_core_D,superfamily_Ras_GEF_dom,superfamily_Histone-fold,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	-	no_errors	SOS2	HGNC	ENSG00000100485	tier1	-	-	76	0	0.00	49	53	51.96
SPATA18	0	genome.wustl.edu	37	4	52943092	52943092	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	4	52943092	52943092	C	T	SNP	SPATA18	ENST00000295213	human	ensembl	74_37	+1	known	silent	c.906	p.L302	0.990	NULL	NULL	-	no_errors	SPATA18	HGNC	ENSG00000163071	tier1	-	-	49	0	0.00	68	24	26.09
SPOCK2	0	genome.wustl.edu	37	10	73827480	73827480	+	Silent	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	73827480	73827480	G	A	SNP	SPOCK2	ENST00000317376	human	ensembl	74_37	-1	known	silent	c.600	p.T200	0.000	pfam_SPARC/Testican_Ca-bd-dom	pfam_SPARC/Testican_Ca-bd-dom,pfam_Thyroglobulin_1,pfam_Kazal_dom,superfamily_Thyroglobulin_1,smart_Kazal_dom,smart_Thyroglobulin_1,pfscan_Thyroglobulin_1	-	no_errors	SPOCK2	HGNC	ENSG00000107742				27	0	0.00	23	2	8.00
SREBF2	0	genome.wustl.edu	37	22	42274003	42274004	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	22	42274003	42274004	GT	-	DEL	SREBF2	ENST00000361204	human	ensembl	74_37	+1	known	frame_shift_del	c.1637_1638	p.V547fs	1.000:0.017	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	SREBF2	HGNC	ENSG00000198911	tier1			51	0	0.00	54	11	16.92
SSPO	0	genome.wustl.edu	37	7	149511902	149511902	+	RNA	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	7	149511902	149511902	C	A	SNP	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.841	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1	-	-	43	0	0.00	26	17	39.53
STAB2	0	genome.wustl.edu	37	12	104136291	104136291	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	104136291	104136291	G	T	SNP	STAB2	ENST00000388887	human	ensembl	74_37	+1	known	missense	c.5990	p.C1997F	1.000	smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom	pfam_FAS1_domain,pfam_Link,superfamily_C-type_lectin_fold,superfamily_FAS1_domain,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_FAS1_domain,smart_Link,pfscan_EG-like_dom,pfscan_FAS1_domain,pfscan_Link	-	no_errors	STAB2	HGNC	ENSG00000136011	tier1	-	-	34	0	0.00	77	5	6.10
SYTL2	0	genome.wustl.edu	37	11	85445485	85445485	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	11	85445485	85445485	G	T	SNP	SYTL2	ENST00000316356	human	ensembl	74_37	-1	known	missense	c.887	p.P296H	0.747	NULL	pfam_C2_dom,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ	-	no_errors	SYTL2	HGNC	ENSG00000137501	tier1	-	-	38	0	0.00	45	4	8.16
TAB2	0	genome.wustl.edu	37	6	149699917	149699917	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	6	149699917	149699917	C	T	SNP	TAB2	ENST00000286332	human	ensembl	74_37	+1	known	missense	c.866	p.S289L	1.000	NULL	pfam_CUE,pfam_Znf_RanBP2,smart_CUE,smart_Znf_RanBP2,pfscan_CUE,pfscan_Znf_RanBP2	-	no_errors	TAB2	HGNC	ENSG00000055208				38	0	0.00	95	5	5.00
TADA2A	0	genome.wustl.edu	37	17	35830506	35830506	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	17	35830506	35830506	G	T	SNP	TADA2A	ENST00000225396	human	ensembl	74_37	+1	known	missense	c.898	p.A300S	1.000	pirsf_Transcriptional_adaptor_2	pfam_SWIRM,pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pirsf_Transcriptional_adaptor_2,pfscan_SWIRM,pfscan_Myb-like_dom	-	no_errors	TADA2A	HGNC	ENSG00000108264	tier1	-	-	42	0	0.00	59	4	6.35
TAF1L	0	genome.wustl.edu	37	9	32631847	32631847	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	9	32631847	32631847	C	T	SNP	TAF1L	ENST00000242310	human	ensembl	74_37	-1	known	missense	c.3731	p.R1244Q	1.000	pirsf_TAF1_animal	pirsf_TAF1_animal,pfam_TFIID_sub1_DUF3591,pfam_Bromodomain,pfam_TAF_II_230-bd,superfamily_Bromodomain,superfamily_TAF_II_230-bd,smart_Bromodomain,prints_Bromodomain,pfscan_Bromodomain	-	no_errors	TAF1L	HGNC	ENSG00000122728	tier1	-	-	45	0	0.00	26	54	67.50
TAMM41	0	genome.wustl.edu	37	3	11888004	11888004	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	11888004	11888004	C	T	SNP	TAMM41	ENST00000273037	human	ensembl	74_37	-1	known	missense	c.107	p.R36H	1.000	pfam_Mmp37,pirsf_Mmp37	pfam_Mmp37,pirsf_Mmp37	-	no_errors	TAMM41	HGNC	ENSG00000144559				90	0	0.00	71	4	5.33
TANK	0	genome.wustl.edu	37	2	162087649	162087649	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	2	162087649	162087649	T	A	SNP	TANK	ENST00000259075	human	ensembl	74_37	+1	known	missense	c.688	p.S230T	1.000	NULL	NULL	-	no_errors	TANK	HGNC	ENSG00000136560				31	0	0.00	25	4	13.79
TBX19	0	genome.wustl.edu	37	1	168283550	168283550	+	RNA	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	1	168283550	168283550	A	G	SNP	TBX19	ENST00000465440	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TBX19	HGNC	ENSG00000143178	tier1	-	-	45	0	0.00	17	95	84.82
TCHH	0	genome.wustl.edu	37	1	152084702	152084702	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	1	152084702	152084702	G	C	SNP	TCHH	ENST00000368804	human	ensembl	74_37	-1	known	missense	c.991	p.Q331E	0.077	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	TCHH	HGNC	ENSG00000159450				43	0	0.00	183	13	6.60
TGIF2LX	0	genome.wustl.edu	37	X	89177504	89177504	+	Silent	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	X	89177504	89177504	G	A	SNP	TGIF2LX	ENST00000283891	human	ensembl	74_37	+1	known	silent	c.420	p.A140	0.000	NULL	pfam_Homeobox_dom,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	TGIF2LX	HGNC	ENSG00000153779	tier1	-	-	45	0	0.00	11	13	54.17
TLE6	0	genome.wustl.edu	37	19	2987131	2987131	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	2987131	2987131	C	T	SNP	TLE6	ENST00000246112	human	ensembl	74_37	+1	known	silent	c.436	p.L146	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom,prints_Groucho_enhance	-	no_errors	TLE6	HGNC	ENSG00000104953				43	0	0.00	70	5	6.67
TMEM117	0	genome.wustl.edu	37	12	44605125	44605125	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	44605125	44605125	C	T	SNP	TMEM117	ENST00000266534	human	ensembl	74_37	+1	known	missense	c.563	p.A188V	1.000	NULL	NULL	-	no_errors	TMEM117	HGNC	ENSG00000139173	tier1	-	-	58	0	0.00	46	26	36.11
TMEM132C	0	genome.wustl.edu	37	12	129028603	129028603	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	129028603	129028603	C	T	SNP	TMEM132C	ENST00000435159	human	ensembl	74_37	+1	known	missense	c.1076	p.T359M	0.977	NULL	NULL	-	no_errors	TMEM132C	HGNC	ENSG00000181234	tier1	-	-	29	0	0.00	93	54	36.73
TMEM155	0	genome.wustl.edu	37	4	122682832	122682832	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	4	122682832	122682832	C	A	SNP	TMEM155	ENST00000337677	human	ensembl	74_37	-1	known	nonsense	c.73	p.E25*	0.593	NULL	NULL	-	no_errors	TMEM155	HGNC	ENSG00000164112				31	0	0.00	31	2	6.06
TNRC6A	0	genome.wustl.edu	37	16	24818001	24818001	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	16	24818001	24818001	A	G	SNP	TNRC6A	ENST00000395799	human	ensembl	74_37	+1	known	missense	c.4436	p.H1479R	1.000	NULL	pfam_Argonaute_hook_dom,superfamily_UBA-like	-	no_errors	TNRC6A	HGNC	ENSG00000090905	tier1	-	-	64	0	0.00	60	54	47.37
TOP2A	0	genome.wustl.edu	37	17	38569797	38569797	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	17	38569797	38569797	G	T	SNP	TOP2A	ENST00000423485	human	ensembl	74_37	-1	known	missense	c.413	p.P138Q	1.000	pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,smart_Topo_IIA	pfam_Topo_IIA_A/C,pfam_Topo_IIA_bsu_dom2,pfam_DTHCT,pfam_HATPase_ATP-bd,superfamily_Topo_IIA_like_dom,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_Topo_IIA,smart_Topo_IIA_A/C,prints_TopoII_euk,prints_Topo_IIA,prints_Transcrpt_fac_NFYB/HAP3	-	no_errors	TOP2A	HGNC	ENSG00000131747	tier1	-	-	98	0	0.00	76	4	5.00
TP53	0	genome.wustl.edu	37	17	7577538	7577538	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	17	7577538	7577538	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.743	p.R248Q	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs11540652	-	40	0	0.00	24	94	79.66
TRIM43	0	genome.wustl.edu	37	2	96265165	96265165	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	2	96265165	96265165	C	T	SNP	TRIM43	ENST00000272395	human	ensembl	74_37	+1	known	silent	c.1185	p.Y395	0.000	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM43	HGNC	ENSG00000144015	tier1	rs200456827	-	13	0	0.00	34	11	24.44
TSFM	0	genome.wustl.edu	37	12	58176601	58176601	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	12	58176601	58176601	C	T	SNP	TSFM	ENST00000323833	human	ensembl	74_37	+1	known	missense	c.17	p.S6L	0.175	NULL	pfam_Transl_elong_EFTs/EF1B_dimer,pfam_UBA/Ts_N,superfamily_Transl_elong_EFTs/EF1B_dimer,superfamily_UBA-like	-	no_errors	TSFM	HGNC	ENSG00000123297	tier1	-	-	49	0	0.00	54	50	48.08
TUBA8	0	genome.wustl.edu	37	22	18613614	18613614	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	22	18613614	18613614	G	A	SNP	TUBA8	ENST00000330423	human	ensembl	74_37	+1	known	missense	c.1061	p.G354D	1.000	pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tub_FtsZ_C,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA8	HGNC	ENSG00000183785	tier1	-	-	55	0	0.00	84	5	5.62
UBAP1	0	genome.wustl.edu	37	9	34241623	34241623	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	9	34241623	34241623	G	T	SNP	UBAP1	ENST00000545103	human	ensembl	74_37	+1	known	missense	c.792	p.L264F	1.000	NULL	superfamily_UBA-like,pfscan_UBA/transl_elong_EF1B_N_euk	-	no_errors	UBAP1	HGNC	ENSG00000165006				46	0	0.00	43	3	6.52
UBOX5	0	genome.wustl.edu	37	20	3102655	3102655	+	Silent	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	20	3102655	3102655	C	A	SNP	UBOX5	ENST00000217173	human	ensembl	74_37	-1	known	silent	c.630	p.L210	0.581	NULL	pfam_Ubox_domain,smart_Ubox_domain,pfscan_Znf_RING	-	no_errors	UBOX5	HGNC	ENSG00000185019				33	0	0.00	75	4	5.06
UBTF	0	genome.wustl.edu	37	17	42286802	42286802	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	17	42286802	42286802	G	T	SNP	UBTF	ENST00000302904	human	ensembl	74_37	-1	known	missense	c.1823	p.S608Y	1.000	superfamily_HMG_box_dom,superfamily_ARM-type_fold,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_HMG_box_dom,superfamily_HMG_box_dom,superfamily_ARM-type_fold,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	UBTF	HGNC	ENSG00000108312	tier1	-	-	38	0	0.00	20	28	58.33
UHRF1	0	genome.wustl.edu	37	19	4954401	4954401	+	RNA	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	4954401	4954401	C	T	SNP	UHRF1	ENST00000262952	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	UHRF1	HGNC	ENSG00000034063	tier1	-	-	50	0	0.00	47	29	37.66
WASH3P	0	genome.wustl.edu	37	15	102512102	102512102	+	RNA	SNP	G	G	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	15	102512102	102512102	G	C	SNP	WASH3P	ENST00000354296	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	WASH3P	HGNC	ENSG00000185596	tier1	-	-	21	0	0.00	19	18	48.65
XAB2	0	genome.wustl.edu	37	19	7685495	7685495	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	7685495	7685495	G	T	SNP	XAB2	ENST00000358368	human	ensembl	74_37	-1	known	missense	c.2032	p.L678I	1.000	NULL	smart_HAT,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	XAB2	HGNC	ENSG00000076924	tier1	-	-	39	0	0.00	60	4	6.06
XPO5	0	genome.wustl.edu	37	6	43538251	43538251	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	6	43538251	43538251	C	A	SNP	XPO5	ENST00000265351	human	ensembl	74_37	-1	known	missense	c.609	p.K203N	0.997	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	XPO5	HGNC	ENSG00000124571	tier1	-	-	65	0	0.00	61	18	22.78
ZBTB33	0	genome.wustl.edu	37	X	119388906	119388906	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	X	119388906	119388906	G	T	SNP	ZBTB33	ENST00000326624	human	ensembl	74_37	+1	known	missense	c.1636	p.G546W	1.000	pfscan_Znf_C2H2	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB33	HGNC	ENSG00000177485	tier1	-	-	59	0	0.00	58	4	6.45
ZC3H15	0	genome.wustl.edu	37	2	187364362	187364362	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	2	187364362	187364362	G	T	SNP	ZC3H15	ENST00000437396	human	ensembl	74_37	+1	known	missense	c.194	p.C65F	0.997	NULL	NULL	-	no_errors	ZC3H15	HGNC	ENSG00000065548	tier1	-	-	72	0	0.00	67	4	5.63
ZFHX3	0	genome.wustl.edu	37	16	72831382	72831382	+	Silent	SNP	T	T	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	16	72831382	72831382	T	C	SNP	ZFHX3	ENST00000268489	human	ensembl	74_37	-1	known	silent	c.5199	p.Q1733	0.934	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX3	HGNC	ENSG00000140836				9	0	0.00	25	6	19.35
ZNF271	0	genome.wustl.edu	37	18	32889613	32889613	+	RNA	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	18	32889613	32889613	A	G	SNP	ZNF271	ENST00000399070	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.124	-	-	-	no_errors	ZNF271	HGNC	ENSG00000257267	tier1	-	-	24	0	0.00	10	16	61.54
ZNF292	0	genome.wustl.edu	37	6	87965931	87965931	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	6	87965931	87965931	G	T	SNP	ZNF292	ENST00000369577	human	ensembl	74_37	+1	known	missense	c.2584	p.A862S	0.955	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF292	HGNC	ENSG00000188994				44	0	0.00	21	2	8.70
ZNF33A	0	genome.wustl.edu	37	10	38343702	38343702	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	38343702	38343702	A	G	SNP	ZNF33A	ENST00000432900	human	ensembl	74_37	+1	known	missense	c.668	p.H223R	0.869	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF33A	HGNC	ENSG00000189180	tier1	-	-	61	0	0.00	27	19	41.30
ZNF37BP	0	genome.wustl.edu	37	10	43015629	43015629	+	RNA	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	43015629	43015629	G	A	SNP	ZNF37BP	ENST00000452075	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.040	-	-	-	no_errors	ZNF37BP	HGNC	ENSG00000234420	tier1	-	-	38	0	0.00	29	6	16.67
ZNF382	0	genome.wustl.edu	37	19	37117694	37117694	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	37117694	37117694	C	G	SNP	ZNF382	ENST00000292928	human	ensembl	74_37	+1	known	missense	c.895	p.P299A	0.149	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF382	HGNC	ENSG00000161298	tier1	-	-	52	0	0.00	53	29	35.37
ZNF420	0	genome.wustl.edu	37	19	37619827	37619827	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	37619827	37619827	G	A	SNP	ZNF420	ENST00000337995	human	ensembl	74_37	+1	known	missense	c.1934	p.C645Y	0.993	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF420	HGNC	ENSG00000197050	tier1	-	-	91	0	0.00	71	27	27.55
ZNF532	0	genome.wustl.edu	37	18	56615330	56615330	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	18	56615330	56615330	G	T	SNP	ZNF532	ENST00000336078	human	ensembl	74_37	+1	known	missense	c.2737	p.V913L	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF532	HGNC	ENSG00000074657	tier1	-	-	32	0	0.00	37	4	9.76
ZNF569	0	genome.wustl.edu	37	19	37903687	37903687	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	37903687	37903687	T	C	SNP	ZNF569	ENST00000316950	human	ensembl	74_37	-1	known	missense	c.1873	p.I625V	0.060	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF569	HGNC	ENSG00000196437	tier1	-	-	60	0	0.00	66	31	31.96
ZNF573	0	genome.wustl.edu	37	19	38283470	38283470	+	RNA	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	38283470	38283470	G	T	SNP	ZNF573	ENST00000480587	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZNF573	HGNC	ENSG00000189144	tier1	-	-	45	0	0.00	66	12	15.38
ZNF654	0	genome.wustl.edu	37	3	88188630	88188630	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	3	88188630	88188630	C	T	SNP	ZNF654	ENST00000309495	human	ensembl	74_37	+1	known	missense	c.170	p.A57V	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF654	HGNC	ENSG00000175105				20	0	0.00	30	2	6.25
ZNF700	0	genome.wustl.edu	37	19	12060151	12060151	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	12060151	12060151	G	A	SNP	ZNF700	ENST00000254321	human	ensembl	74_37	+1	known	missense	c.1312	p.G438R	0.174	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF700	HGNC	ENSG00000196757	tier1	-	-	66	0	0.00	104	20	16.13
ZNF700	0	genome.wustl.edu	37	19	12060159	12060159	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	12060159	12060159	C	T	SNP	ZNF700	ENST00000254321	human	ensembl	74_37	+1	known	silent	c.1320	p.H440	0.994	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF700	HGNC	ENSG00000196757	tier1	-	-	61	0	0.00	102	21	16.80
ZNF700	0	genome.wustl.edu	37	19	12060127	12060127	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	12060127	12060127	G	A	SNP	ZNF700	ENST00000254321	human	ensembl	74_37	+1	known	missense	c.1288	p.A430T	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF700	HGNC	ENSG00000196757				69	0	0.00	106	8	7.02
ZNF700	0	genome.wustl.edu	37	19	12060135	12060135	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	12060135	12060135	G	C	SNP	ZNF700	ENST00000254321	human	ensembl	74_37	+1	known	missense	c.1296	p.Q432H	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF700	HGNC	ENSG00000196757				69	0	0.00	107	7	6.09
ZNF700	0	genome.wustl.edu	37	19	12060147	12060147	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	12060147	12060147	C	T	SNP	ZNF700	ENST00000254321	human	ensembl	74_37	+1	known	silent	c.1308	p.H436	0.090	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF700	HGNC	ENSG00000196757				69	0	0.00	103	17	14.17
ZNF711	0	genome.wustl.edu	37	X	84526289	84526289	+	Silent	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	X	84526289	84526289	C	T	SNP	ZNF711	ENST00000395402	human	ensembl	74_37	+1	known	silent	c.1765	p.L589	0.953	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Transcrp_activ_Zfx/Zfy-dom,pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF711	HGNC	ENSG00000147180	tier1	-	-	64	0	0.00	38	4	9.52
ZNF829	0	genome.wustl.edu	37	19	37406748	37406748	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	19	37406748	37406748	C	T	SNP	ZNF829	ENST00000520965	human	ensembl	74_37	-1	known	missense	c.109	p.E37K	0.002	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF829	HGNC	ENSG00000185869	tier1	-	-	27	0	0.00	55	10	15.38
ZSWIM8	0	genome.wustl.edu	37	10	75556109	75556109	+	RNA	DEL	A	A	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	75556109	75556109	A	-	DEL	ZSWIM8	ENST00000425051	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.341	-	-	-	no_errors	ZSWIM8	HGNC	ENSG00000214655	tier1			14	0	0.00	17	2	10.53
ZSWIM8	0	genome.wustl.edu	37	10	75560670	75560670	+	RNA	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	10	75560670	75560670	G	T	SNP	ZSWIM8	ENST00000466568	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	ZSWIM8	HGNC	ENSG00000214655				52	0	0.00	73	4	5.19
ZWILCH	0	genome.wustl.edu	37	15	66811367	66811370	+	Frame_Shift_Del	DEL	AACA	AACA	-			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	AACA	AACA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	15	66811367	66811370	AACA	0	DEL	ZWILCH	ENST00000307897	human	ensembl	74_37	+1	known	frame_shift_del	c.471_474	p.N159fs	0.000:0.000:0.007:0.000	pfam_RZZ-complex_zwilch	pfam_RZZ-complex_zwilch	-	no_errors	ZWILCH	HGNC	ENSG00000174442				67	0	0.00	60	6	9.09
ZZEF1	0	genome.wustl.edu	37	17	3969750	3969750	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	17	3969750	3969750	C	G	SNP	ZZEF1	ENST00000381638	human	ensembl	74_37	-1	known	missense	c.4240	p.E1414Q	0.996	NULL	pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_CUB_dom,smart_EF_hand_dom,smart_Znf_ZZ,pfscan_EF_hand_dom,pfscan_Znf_ZZ	-	no_errors	ZZEF1	HGNC	ENSG00000074755	tier1	-	-	59	0	0.00	71	39	35.45
ZZEF1	0	genome.wustl.edu	37	17	3992103	3992103	+	Silent	SNP	G	G	T			TCGA-LN-A8I1-01A-11D-A36J-09	TCGA-LN-A8I1-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	62b389fa-2db2-4b3a-9168-021bfea8d00f	5b49dfb2-1197-4a77-afeb-3d827509d4c6	17	3992103	3992103	G	T	SNP	ZZEF1	ENST00000381638	human	ensembl	74_37	-1	known	silent	c.2110	p.R704	0.998	NULL	pfam_Znf_ZZ,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_CUB_dom,smart_EF_hand_dom,smart_Znf_ZZ,pfscan_EF_hand_dom,pfscan_Znf_ZZ	-	no_errors	ZZEF1	HGNC	ENSG00000074755	tier1	-	-	49	0	0.00	59	4	6.35
