Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA1	0	genome.wustl.edu	37	9	107581886	107581886	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	107581886	107581886	C	A	SNP	ABCA1	ENST00000374736	human	ensembl	74_37	-1	known	silent	c.3222	p.L1074	1.000	superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA1	HGNC	ENSG00000165029	tier1	-	-	87	0	0.00	61	10	14.08
ACE	0	genome.wustl.edu	37	17	61557763	61557763	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	61557763	61557763	G	T	SNP	ACE	ENST00000290866	human	ensembl	74_37	+1	known	nonsense	c.721	p.E241*	1.000	pfam_Peptidase_M2	pfam_Peptidase_M2,prints_Peptidase_M2	-	no_errors	ACE	HGNC	ENSG00000159640	tier1	-	-	87	0	0.00	122	21	14.69
ACTL9	0	genome.wustl.edu	37	19	8808653	8808653	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	8808653	8808653	C	A	SNP	ACTL9	ENST00000324436	human	ensembl	74_37	-1	known	silent	c.399	p.L133	1.000	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,smart_Actin-related,prints_Actin-related	-	no_errors	ACTL9	HGNC	ENSG00000181786	tier1	-	-	34	0	0.00	23	6	20.69
ACTR2	0	genome.wustl.edu	37	2	65454994	65454994	+	RNA	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	65454994	65454994	G	C	SNP	ACTR2	ENST00000471552	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.993	-	-	-	no_errors	ACTR2	HGNC	ENSG00000138071	tier1	-	-	126	0	0.00	181	15	7.65
ACVRL1	0	genome.wustl.edu	37	12	52306268	52306268	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	52306268	52306268	G	T	SNP	ACVRL1	ENST00000550683	human	ensembl	74_37	+1	known	missense	c.52	p.G18C	0.620	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_TGF_beta_rcpt_GS,superfamily_Kinase-like_dom,smart_TGF_beta_rcpt_GS,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_TGFB_receptor	-	no_errors	ACVRL1	HGNC	ENSG00000139567	tier1	-	-	61	0	0.00	61	7	10.29
ADAD1	0	genome.wustl.edu	37	4	123302179	123302179	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	123302179	123302179	C	A	SNP	ADAD1	ENST00000296513	human	ensembl	74_37	+1	known	missense	c.205	p.L69I	0.728	NULL	pfam_A_deamin,pfam_dsRNA-bd_dom,smart_dsRNA-bd_dom,smart_A_deamin,pfscan_dsRNA-bd_dom,pfscan_A_deamin	-	no_errors	ADAD1	HGNC	ENSG00000164113	tier1	-	-	100	0	0.00	103	16	13.45
ADAM15	0	genome.wustl.edu	37	1	155023056	155023056	+	RNA	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	155023056	155023056	C	T	SNP	ADAM15	ENST00000473905	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	ADAM15	HGNC	ENSG00000143537	tier1	-	-	58	0	0.00	60	5	7.58
ADAMTSL3	0	genome.wustl.edu	37	15	84539610	84539610	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	15	84539610	84539610	G	A	SNP	ADAMTSL3	ENST00000286744	human	ensembl	74_37	+1	known	missense	c.859	p.G287S	0.866	NULL	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTSL3	HGNC	ENSG00000156218	tier1	-	-	112	0	0.00	136	9	6.21
ADCY10	0	genome.wustl.edu	37	1	167792265	167792265	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	167792265	167792265	C	A	SNP	ADCY10	ENST00000367851	human	ensembl	74_37	-1	known	missense	c.4149	p.L1383F	1.000	pirsf_Adenylate_cylcase_typ10	pfam_A/G_cyclase,superfamily_A/G_cyclase,superfamily_P-loop_NTPase,pirsf_Adenylate_cylcase_typ10,pfscan_A/G_cyclase	-	no_errors	ADCY10	HGNC	ENSG00000143199	tier1	-	-	96	0	0.00	123	14	10.22
ADCY4	0	genome.wustl.edu	37	14	24798662	24798662	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	24798662	24798662	C	A	SNP	ADCY4	ENST00000310677	human	ensembl	74_37	-1	known	missense	c.1295	p.R432L	0.993	pfam_A/G_cyclase,superfamily_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY4	HGNC	ENSG00000129467				51	0	0.00	57	4	6.56
ADH7	0	genome.wustl.edu	37	4	100350696	100350696	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	100350696	100350696	C	A	SNP	ADH7	ENST00000209665	human	ensembl	74_37	-1	known	missense	c.149	p.R50L	0.648	pfam_ADH_GroES-like,superfamily_GroES-like	pfam_ADH_GroES-like,pfam_ADH_C,superfamily_GroES-like	-	no_errors	ADH7	HGNC	ENSG00000196344	tier1	-	-	130	0	0.00	115	12	9.45
AHNAK2	0	genome.wustl.edu	37	14	105418587	105418587	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	105418587	105418587	C	A	SNP	AHNAK2	ENST00000333244	human	ensembl	74_37	-1	known	silent	c.3201	p.P1067	0.000	NULL	superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	AHNAK2	HGNC	ENSG00000185567	tier1	-	-	139	0	0.00	146	18	10.98
AIMP1	0	genome.wustl.edu	37	4	107248633	107248633	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	107248633	107248633	G	C	SNP	AIMP1	ENST00000394701	human	ensembl	74_37	+1	known	missense	c.207	p.E69D	1.000	superfamily_t-SNARE	pfam_tRNA-bd_dom,superfamily_NA-bd_OB-fold,superfamily_t-SNARE,pfscan_tRNA-bd_dom	-	no_errors	AIMP1	HGNC	ENSG00000164022	tier1	-	-	126	0	0.00	141	21	12.96
AKAP3	0	genome.wustl.edu	37	12	4737521	4737521	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	4737521	4737521	C	T	SNP	AKAP3	ENST00000228850	human	ensembl	74_37	-1	known	missense	c.547	p.V183I	0.203	pfam_AKAP_110_C,smart_AKAP_110	pfam_AKAP_110_C,pfam_RII_binding_1,smart_AKAP_110	-	no_errors	AKAP3	HGNC	ENSG00000111254	tier1	rs140759485	-	70	0	0.00	64	8	11.11
AKR1A1	0	genome.wustl.edu	37	1	46033797	46033797	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	46033797	46033797	G	T	SNP	AKR1A1	ENST00000351829	human	ensembl	74_37	+1	known	missense	c.500	p.R167L	1.000	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1A1	HGNC	ENSG00000117448	tier1	-	-	48	0	0.00	59	9	13.24
AKR1C4	0	genome.wustl.edu	37	10	5260694	5260694	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	5260694	5260694	C	A	SNP	AKR1C4	ENST00000263126	human	ensembl	74_37	+1	known	missense	c.943	p.P315T	0.007	superfamily_NADP_OxRdtase_dom	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_Aldo/keto_reductase_subgr	-	no_errors	AKR1C4	HGNC	ENSG00000198610	tier1	-	-	53	0	0.00	56	8	12.50
ALDOB	0	genome.wustl.edu	37	9	104187755	104187755	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	104187755	104187755	G	T	SNP	ALDOB	ENST00000374855	human	ensembl	74_37	-1	known	missense	c.779	p.T260N	0.999	pfam_Aldolase_I	pfam_Aldolase_I	-	no_errors	ALDOB	HGNC	ENSG00000136872	tier1	-	-	89	0	0.00	89	14	13.59
ALKBH1	0	genome.wustl.edu	37	14	78142116	78142116	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	78142116	78142116	C	A	SNP	ALKBH1	ENST00000216489	human	ensembl	74_37	-1	known	missense	c.623	p.G208V	1.000	tigrfam_Alkb	tigrfam_Alkb	-	no_errors	ALKBH1	HGNC	ENSG00000100601	tier1	-	-	78	0	0.00	118	12	9.23
ALOX12	0	genome.wustl.edu	37	17	6901872	6901872	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	6901872	6901872	C	A	SNP	ALOX12	ENST00000251535	human	ensembl	74_37	+1	known	silent	c.382	p.R128	0.996	superfamily_LipOase_C	pfam_LipOase_C,pfam_PLAT/LH2_dom,superfamily_LipOase_C,superfamily_Lipase_LipOase,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,prints_LipOase_mml,prints_LipOase_C	-	no_errors	ALOX12	HGNC	ENSG00000108839	tier1	-	-	46	0	0.00	36	6	14.29
AMFR	0	genome.wustl.edu	37	16	56396854	56396854	+	Silent	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	56396854	56396854	C	G	SNP	AMFR	ENST00000290649	human	ensembl	74_37	-1	known	silent	c.1899	p.A633	0.014	NULL	pfam_CUE,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_CUE,pfscan_CUE,pfscan_Znf_RING	-	no_errors	AMFR	HGNC	ENSG00000159461	tier1	-	-	87	0	0.00	106	6	5.36
AMOT	0	genome.wustl.edu	37	X	112059028	112059028	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	112059028	112059028	C	A	SNP	AMOT	ENST00000371959	human	ensembl	74_37	-1	known	missense	c.950	p.G317V	1.000	NULL	pfam_Angiomotin_C,superfamily_Prefoldin,prints_Angiomotin	-	no_errors	AMOT	HGNC	ENSG00000126016	tier1	-	-	88	0	0.00	88	9	9.28
ANGEL2	0	genome.wustl.edu	37	1	213180441	213180442	+	RNA	INS	-	-	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	213180441	213180442	-	A	INS	ANGEL2	ENST00000460337	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003:0.007	-	-	-	no_errors	ANGEL2	HGNC	ENSG00000174606	tier1			13	0	0.00	29	5	14.71
ANKEF1	0	genome.wustl.edu	37	20	10030541	10030541	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	10030541	10030541	G	T	SNP	ANKEF1	ENST00000378380	human	ensembl	74_37	+1	known	missense	c.1324	p.A442S	0.000	pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EF_hand_dom,prints_Ankyrin_rpt	-	no_errors	ANKEF1	HGNC	ENSG00000132623				42	0	0.00	61	4	6.15
ANKRA2	0	genome.wustl.edu	37	5	72849262	72849262	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	5	72849262	72849262	C	A	SNP	ANKRA2	ENST00000296785	human	ensembl	74_37	-1	known	missense	c.855	p.M285I	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRA2	HGNC	ENSG00000164331				21	0	0.00	32	5	13.51
ANKRD12	0	genome.wustl.edu	37	18	9255003	9255003	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	18	9255003	9255003	C	A	SNP	ANKRD12	ENST00000262126	human	ensembl	74_37	+1	known	missense	c.1738	p.L580I	0.945	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD12	HGNC	ENSG00000101745				23	0	0.00	36	2	5.26
ANKRD2	0	genome.wustl.edu	37	10	99338020	99338020	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	99338020	99338020	G	T	SNP	ANKRD2	ENST00000307518	human	ensembl	74_37	+1	known	silent	c.294	p.T98	0.796	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD2	HGNC	ENSG00000165887	tier1	-	-	51	0	0.00	59	5	7.81
ANKRD27	0	genome.wustl.edu	37	19	33090932	33090932	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	33090932	33090932	G	T	SNP	ANKRD27	ENST00000306065	human	ensembl	74_37	-1	known	missense	c.2792	p.P931Q	0.889	NULL	pfam_Ankyrin_rpt,pfam_VPS9,superfamily_Ankyrin_rpt-contain_dom,smart_VPS9_subgr,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_VPS9,prints_Ankyrin_rpt	-	no_errors	ANKRD27	HGNC	ENSG00000105186	tier1	-	-	43	0	0.00	51	4	7.27
ANKRD27	0	genome.wustl.edu	37	19	33119650	33119650	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	33119650	33119650	C	T	SNP	ANKRD27	ENST00000306065	human	ensembl	74_37	-1	known	missense	c.1315	p.D439N	0.890	superfamily_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,pfam_VPS9,superfamily_Ankyrin_rpt-contain_dom,smart_VPS9_subgr,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_VPS9,prints_Ankyrin_rpt	-	no_errors	ANKRD27	HGNC	ENSG00000105186	tier1	-	-	82	0	0.00	80	12	13.04
ANKRD49	0	genome.wustl.edu	37	11	94231384	94231384	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	94231384	94231384	G	A	SNP	ANKRD49	ENST00000302755	human	ensembl	74_37	+1	known	missense	c.406	p.A136T	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD49	HGNC	ENSG00000168876	tier1	-	-	75	0	0.00	95	9	8.65
ANPEP	0	genome.wustl.edu	37	15	90347795	90347795	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	15	90347795	90347795	G	T	SNP	ANPEP	ENST00000300060	human	ensembl	74_37	-1	known	silent	c.951	p.A317	0.997	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ANPEP	HGNC	ENSG00000166825	tier1	-	-	45	0	0.00	49	5	9.26
AP4B1	0	genome.wustl.edu	37	1	114442519	114442519	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	114442519	114442519	C	A	SNP	AP4B1	ENST00000369566	human	ensembl	74_37	-1	known	missense	c.842	p.C281F	0.000	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold	pfam_Clathrin/coatomer_adapt-like_N,superfamily_ARM-type_fold	-	no_errors	AP4B1	HGNC	ENSG00000134262	tier1	-	-	44	0	0.00	47	8	14.55
API5	0	genome.wustl.edu	37	11	43342370	43342370	+	Splice_Site	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	43342370	43342370	G	C	SNP	API5	ENST00000531273	human	ensembl	74_37	+1	known	splice_site	c.232-1	e3-1	1.000	-	-	-	no_errors	API5	HGNC	ENSG00000166181	tier1	-	-	160	0	0.00	149	10	6.29
APOB	0	genome.wustl.edu	37	2	21230801	21230801	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	21230801	21230801	G	C	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.8939	p.S2980C	0.746	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674	tier1	-	-	82	0	0.00	65	9	12.16
AR	0	genome.wustl.edu	37	X	66931399	66931399	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	66931399	66931399	A	G	SNP	AR	ENST00000374690	human	ensembl	74_37	+1	known	missense	c.2041	p.I681V	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Andrgn_rcpt,pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Andrgn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	AR	HGNC	ENSG00000169083				70	0	0.00	57	4	6.56
ARHGAP33	0	genome.wustl.edu	37	19	36269201	36269201	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	36269201	36269201	G	T	SNP	ARHGAP33	ENST00000007510	human	ensembl	74_37	+1	known	missense	c.209	p.R70L	0.899	NULL	pfam_RhoGAP_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,superfamily_Phox,smart_SH3_domain,smart_RhoGAP_dom,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP33	HGNC	ENSG00000004777	tier1	-	-	57	0	0.00	58	4	6.25
ARHGAP6	0	genome.wustl.edu	37	X	11204402	11204402	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	11204402	11204402	C	A	SNP	ARHGAP6	ENST00000337414	human	ensembl	74_37	-1	known	missense	c.1227	p.Q409H	1.000	superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	ARHGAP6	HGNC	ENSG00000047648	tier1	-	-	91	0	0.00	87	5	5.43
ARHGEF15	0	genome.wustl.edu	37	17	8215691	8215691	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	8215691	8215691	C	A	SNP	ARHGEF15	ENST00000361926	human	ensembl	74_37	+1	known	missense	c.334	p.P112T	0.205	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	-	no_errors	ARHGEF15	HGNC	ENSG00000198844	tier1	-	-	123	0	0.00	122	16	11.59
ARRB2	0	genome.wustl.edu	37	17	4619267	4619267	+	Splice_Site	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	4619267	4619267	G	C	SNP	ARRB2	ENST00000269260	human	ensembl	74_37	+1	known	splice_site	c.55-1	e3-1	1.000	-	-	-	no_errors	ARRB2	HGNC	ENSG00000141480	tier1	-	-	62	0	0.00	65	6	8.22
ASB2	0	genome.wustl.edu	37	14	94405565	94405565	+	Silent	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	94405565	94405565	G	C	SNP	ASB2	ENST00000315988	human	ensembl	74_37	-1	known	silent	c.1362	p.G454	0.993	NULL	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C,prints_Ankyrin_rpt	-	no_errors	ASB2	HGNC	ENSG00000100628	tier1	-	-	59	0	0.00	61	12	16.44
ASIC1	0	genome.wustl.edu	37	12	50453616	50453616	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	50453616	50453616	G	T	SNP	ASIC1	ENST00000228468	human	ensembl	74_37	+1	known	missense	c.437	p.S146I	1.000	pfam_Na+channel_ASC	pfam_Na+channel_ASC,prints_Na+channel_ASC	-	no_errors	ASIC1	HGNC	ENSG00000110881	tier1	-	-	58	0	0.00	69	8	10.39
ASXL2	0	genome.wustl.edu	37	2	25994388	25994388	+	Nonsense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	25994388	25994388	G	C	SNP	ASXL2	ENST00000435504	human	ensembl	74_37	-1	known	nonsense	c.425	p.S142*	1.000	NULL	superfamily_Znf_FYVE_PHD	-	no_errors	ASXL2	HGNC	ENSG00000143970	tier1	-	-	91	0	0.00	110	15	12.00
ATAD1	0	genome.wustl.edu	37	10	89514503	89514503	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	89514503	89514503	T	C	SNP	ATAD1	ENST00000308448	human	ensembl	74_37	-1	known	missense	c.1027	p.M343V	1.000	superfamily_P-loop_NTPase	pfam_ATPase_AAA_core,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	ATAD1	HGNC	ENSG00000138138	tier1	-	-	73	0	0.00	78	6	7.14
ATF7IP	0	genome.wustl.edu	37	12	14577456	14577456	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	14577456	14577456	G	T	SNP	ATF7IP	ENST00000261168	human	ensembl	74_37	+1	known	missense	c.607	p.D203Y	0.178	NULL	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	ATF7IP	HGNC	ENSG00000171681	tier1	-	-	100	0	0.00	115	12	9.45
ATM	0	genome.wustl.edu	37	11	108122714	108122714	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	108122714	108122714	G	T	SNP	ATM	ENST00000278616	human	ensembl	74_37	+1	known	missense	c.1758	p.E586D	0.982	superfamily_ARM-type_fold	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_TAN,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATM	HGNC	ENSG00000149311				44	0	0.00	28	2	6.67
ATP10D	0	genome.wustl.edu	37	4	47562981	47562981	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	47562981	47562981	G	T	SNP	ATP10D	ENST00000273859	human	ensembl	74_37	+1	known	nonsense	c.2557	p.E853*	0.996	pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP10D	HGNC	ENSG00000145246	tier1	-	-	75	0	0.00	98	9	8.41
ATP13A5	0	genome.wustl.edu	37	3	193052744	193052744	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	193052744	193052744	G	T	SNP	ATP13A5	ENST00000342358	human	ensembl	74_37	-1	known	missense	c.1088	p.P363H	0.985	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Cation_typ_V	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_Cation_typ_V,pfam_ATPase_P-typ_cation-transptr_N,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A5	HGNC	ENSG00000187527	tier1	-	-	59	0	0.00	51	37	42.05
ATP1A3	0	genome.wustl.edu	37	19	42492163	42492163	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	42492163	42492163	C	A	SNP	ATP1A3	ENST00000302102	human	ensembl	74_37	-1	known	silent	c.282	p.L94	1.000	pfam_ATPase_P-typ_cation-transptr_N,smart_ATPase_P-typ_cation-transptr_N,tigrfam_ATPase_P-typ_Na/K_IIC	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Na/K_IIC,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP1A3	HGNC	ENSG00000105409	tier1	-	-	85	0	0.00	102	13	11.30
ATP2A3	0	genome.wustl.edu	37	17	3850765	3850765	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	3850765	3850765	C	A	SNP	ATP2A3	ENST00000359983	human	ensembl	74_37	-1	known	missense	c.1015	p.V339L	1.000	pfam_ATPase_P-typ_transduc_dom_A,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_IIA,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2A3	HGNC	ENSG00000074370	tier1	-	-	67	0	0.00	64	7	9.86
ATP2B1	0	genome.wustl.edu	37	12	89998032	89998032	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	89998032	89998032	C	T	SNP	ATP2B1	ENST00000261173	human	ensembl	74_37	-1	known	missense	c.2534	p.G845E	1.000	superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B1	HGNC	ENSG00000070961	tier1	-	-	68	0	0.00	83	10	10.75
ATP2B4	0	genome.wustl.edu	37	1	203669405	203669405	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	203669405	203669405	G	C	SNP	ATP2B4	ENST00000357681	human	ensembl	74_37	+1	known	missense	c.721	p.G241R	1.000	pfam_ATPase_P-typ_transduc_dom_A,prints_Cation_transp_P_typ_ATPase,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B4	HGNC	ENSG00000058668	tier1	-	-	60	0	0.00	61	15	19.74
ATXN2	0	genome.wustl.edu	37	12	111990213	111990213	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	111990213	111990213	C	G	SNP	ATXN2	ENST00000377617	human	ensembl	74_37	-1	known	missense	c.922	p.A308P	1.000	superfamily_LSM_dom	pfam_LsmAD_domain,pfam_Ataxin-2_C,superfamily_LSM_dom	-	no_errors	ATXN2	HGNC	ENSG00000204842	tier1	-	-	82	0	0.00	104	6	5.45
BABAM1	0	genome.wustl.edu	37	19	17379661	17379661	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	17379661	17379661	G	T	SNP	BABAM1	ENST00000359435	human	ensembl	74_37	+1	known	nonsense	c.46	p.E16*	1.000	NULL	NULL	-	no_errors	BABAM1	HGNC	ENSG00000105393	tier1	-	-	90	0	0.00	95	11	10.38
BAI1	0	genome.wustl.edu	37	8	143618431	143618431	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	8	143618431	143618431	C	T	SNP	BAI1	ENST00000323289	human	ensembl	74_37	+1	known	silent	c.3654	p.H1218	0.704	NULL	pfam_GPCR_2_secretin-like,pfam_Thrombospondin_1_rpt,pfam_DUF3497,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like	-	no_errors	BAI1	HGNC	ENSG00000181790	tier1	-	-	142	0	0.00	197	11	5.29
BAIAP2	0	genome.wustl.edu	37	17	79079945	79079945	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	79079945	79079945	A	T	SNP	BAIAP2	ENST00000321300	human	ensembl	74_37	+1	known	missense	c.1336	p.S446C	1.000	NULL	pfam_IRSp53/MIM_homology_IMD,pfam_SH3_2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	BAIAP2	HGNC	ENSG00000175866	tier1	-	-	45	0	0.00	58	5	7.94
BANP	0	genome.wustl.edu	37	16	88052217	88052217	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	88052217	88052217	G	T	SNP	BANP	ENST00000286122	human	ensembl	74_37	+1	known	missense	c.815	p.G272V	1.000	pfam_BEN_domain	pfam_BEN_domain	-	no_errors	BANP	HGNC	ENSG00000172530	tier1	-	-	73	0	0.00	60	5	7.69
BBS7	0	genome.wustl.edu	37	4	122774232	122774232	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	122774232	122774232	C	A	SNP	BBS7	ENST00000264499	human	ensembl	74_37	-1	known	missense	c.728	p.C243F	1.000	superfamily_WD40_repeat_dom,pirsf_Bardet-Biedl_syndrome_7_prot	superfamily_WD40_repeat_dom,pirsf_Bardet-Biedl_syndrome_7_prot	-	no_errors	BBS7	HGNC	ENSG00000138686	tier1	-	-	77	0	0.00	68	9	11.69
BCL3	0	genome.wustl.edu	37	19	45262823	45262823	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	45262823	45262823	G	A	SNP	BCL3	ENST00000164227	human	ensembl	74_37	+1	known	missense	c.1316	p.R439Q	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	BCL3	HGNC	ENSG00000069399	tier1	-	-	85	0	0.00	117	9	7.14
BEGAIN	0	genome.wustl.edu	37	14	101005081	101005081	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	101005081	101005081	C	A	SNP	BEGAIN	ENST00000355173	human	ensembl	74_37	-1	known	missense	c.1007	p.R336L	0.824	NULL	superfamily_Prefoldin	-	no_errors	BEGAIN	HGNC	ENSG00000183092	tier1	-	-	22	0	0.00	17	5	21.74
BIRC8	0	genome.wustl.edu	37	19	53792962	53792962	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	53792962	53792962	C	A	SNP	BIRC8	ENST00000426466	human	ensembl	74_37	-1	known	missense	c.666	p.M222I	1.000	smart_Znf_RING,pfscan_Znf_RING	pfam_BIR,smart_BIR,smart_Znf_RING,pfscan_BIR,pfscan_Znf_RING	-	no_errors	BIRC8	HGNC	ENSG00000163098	tier1	-	-	44	0	0.00	45	4	8.16
BPIFA2	0	genome.wustl.edu	37	20	31767424	31767424	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	31767424	31767424	C	A	SNP	BPIFA2	ENST00000253362	human	ensembl	74_37	+1	known	silent	c.660	p.I220	0.001	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom	pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom	-	no_errors	BPIFA2	HGNC	ENSG00000131050	tier1	-	-	59	0	0.00	59	10	14.29
BPIFB2	0	genome.wustl.edu	37	20	31606541	31606541	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	31606541	31606541	C	A	SNP	BPIFB2	ENST00000170150	human	ensembl	74_37	+1	known	silent	c.768	p.T256	0.017	pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFB2	HGNC	ENSG00000078898	tier1	-	-	27	0	0.00	32	8	20.00
BRCA1	0	genome.wustl.edu	37	17	41247865	41247865	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	41247865	41247865	T	G	SNP	BRCA1	ENST00000471181	human	ensembl	74_37	-1	known	missense	c.668	p.K223T	0.941	pirsf_BRCA1	pirsf_BRCA1,pfam_BRCT_dom,pfam_Znf_C3HC4_RING-type,superfamily_BRCT_dom,smart_Znf_RING,smart_BRCT_dom,prints_BRCA1,pfscan_BRCT_dom,pfscan_Znf_RING	-	no_errors	BRCA1	HGNC	ENSG00000012048	tier1	-	-	64	0	0.00	99	9	8.33
C10orf112	0	genome.wustl.edu	37	10	19856477	19856477	+	Missense_Mutation	SNP	T	T	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	19856477	19856477	T	G	SNP	C10orf112	ENST00000454679	human	ensembl	74_37	+1	known	missense	c.3623	p.V1208G	0.796	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_MAM_dom,pfam_LDrepeatLR_classA_rpt,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_MAM_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,prints_LDrepeatLR_classA_rpt,prints_MAM_dom	-	no_errors	C10orf112	HGNC	ENSG00000204740	tier1	-	-	113	0	0.00	89	15	14.42
C10orf68	0	genome.wustl.edu	37	10	32912689	32912689	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	32912689	32912689	G	T	SNP	C10orf68	ENST00000375028	human	ensembl	74_37	+1	putative	missense	c.29	p.G10V	0.378	NULL	NULL	-	no_errors	C10orf68	HGNC	ENSG00000150076	tier1	-	-	31	0	0.00	33	4	10.81
C12orf42	0	genome.wustl.edu	37	12	103872154	103872154	+	Silent	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	103872154	103872154	G	C	SNP	C12orf42	ENST00000378113	human	ensembl	74_37	-1	known	silent	c.51	p.T17	0.049	NULL	NULL	-	no_errors	C12orf42	HGNC	ENSG00000179088				24	0	0.00	34	4	10.53
C12orf66	0	genome.wustl.edu	37	12	64609507	64609507	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	64609507	64609507	C	T	SNP	C12orf66	ENST00000398055	human	ensembl	74_37	-1	known	missense	c.472	p.E158K	1.000	pfam_DUF2003	pfam_DUF2003	-	no_errors	C12orf66	HGNC	ENSG00000174206	tier1	-	-	70	0	0.00	81	5	5.81
C12orf74	0	genome.wustl.edu	37	12	93100603	93100603	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	93100603	93100603	T	A	SNP	C12orf74	ENST00000397833	human	ensembl	74_37	+1	known	missense	c.196	p.W66R	0.020	NULL	NULL	-	no_errors	C12orf74	HGNC	ENSG00000214215	tier1	-	-	42	0	0.00	75	10	11.76
C12orf74	0	genome.wustl.edu	37	12	93100604	93100604	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	93100604	93100604	G	T	SNP	C12orf74	ENST00000397833	human	ensembl	74_37	+1	known	missense	c.197	p.W66L	0.008	NULL	NULL	-	no_errors	C12orf74	HGNC	ENSG00000214215	tier1	-	-	41	0	0.00	74	10	11.90
C12orf74	0	genome.wustl.edu	37	12	93100605	93100605	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	93100605	93100605	G	T	SNP	C12orf74	ENST00000397833	human	ensembl	74_37	+1	known	missense	c.198	p.W66C	0.002	NULL	NULL	-	no_errors	C12orf74	HGNC	ENSG00000214215	tier1	-	-	41	0	0.00	73	10	12.05
C14orf23	0	genome.wustl.edu	37	14	29261363	29261363	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	29261363	29261363	G	T	SNP	C14orf23	ENST00000399387	human	ensembl	74_37	+1	known	missense	c.400	p.G134W	0.000	NULL	NULL	-	no_errors	C14orf23	HGNC	ENSG00000186960	tier1	-	-	53	0	0.00	73	8	9.88
C14orf28	0	genome.wustl.edu	37	14	45370114	45370114	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	45370114	45370114	G	A	SNP	C14orf28	ENST00000325192	human	ensembl	74_37	+1	known	missense	c.476	p.R159Q	1.000	NULL	NULL	-	no_errors	C14orf28	HGNC	ENSG00000179476	tier1	-	-	70	0	0.00	81	10	10.99
C16orf58	0	genome.wustl.edu	37	16	31512031	31512031	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	31512031	31512031	C	A	SNP	C16orf58	ENST00000327237	human	ensembl	74_37	-1	known	missense	c.437	p.R146L	1.000	pfam_RUS2/WXR1	pfam_RUS2/WXR1	-	no_errors	C16orf58	HGNC	ENSG00000140688	tier1	-	-	60	0	0.00	70	5	6.67
C17orf99	0	genome.wustl.edu	37	17	76160282	76160282	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	76160282	76160282	C	T	SNP	C17orf99	ENST00000340363	human	ensembl	74_37	+1	known	silent	c.477	p.N159	0.500	NULL	NULL	-	no_errors	C17orf99	HGNC	ENSG00000187997				58	0	0.00	63	4	5.97
C19orf55	0	genome.wustl.edu	37	19	36257856	36257856	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	36257856	36257856	G	C	SNP	C19orf55	ENST00000396908	human	ensembl	74_37	+1	known	missense	c.957	p.L319F	0.399	NULL	NULL	-	no_errors	C19orf55	HGNC	ENSG00000167595	tier1	-	-	70	0	0.00	68	5	6.85
C1orf168	0	genome.wustl.edu	37	1	57185023	57185023	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	57185023	57185023	C	A	SNP	C1orf168	ENST00000493000	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.923	-	-	-	no_errors	C1orf168	HGNC	ENSG00000187889	tier1	-	-	53	0	0.00	54	4	6.90
C1orf195	0	genome.wustl.edu	37	1	15497754	15497754	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	15497754	15497754	G	T	SNP	C1orf195	ENST00000376005	human	ensembl	74_37	-1	known	silent	c.21	p.T7	0.006	NULL	NULL	-	no_errors	C1orf195	HGNC	ENSG00000204464	tier1	-	-	88	0	0.00	86	5	5.49
C20orf166	0	genome.wustl.edu	37	20	61167653	61167653	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	61167653	61167653	C	A	SNP	C20orf166	ENST00000370527	human	ensembl	74_37	+1	known	silent	c.123	p.V41	0.000	NULL	NULL	-	no_errors	C20orf166	HGNC	ENSG00000174407	tier1	-	-	61	0	0.00	72	7	8.86
C21orf88	0	genome.wustl.edu	37	21	40971376	40971376	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	21	40971376	40971376	C	A	SNP	C21orf88	ENST00000489821	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	C21orf88	HGNC	ENSG00000184809	tier1	-	-	86	0	0.00	84	5	5.56
C22orf34	0	genome.wustl.edu	37	22	50016932	50016932	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	22	50016932	50016932	G	T	SNP	C22orf34	ENST00000444628	human	ensembl	74_37	-1	known	missense	c.962	p.P321H	0.000	NULL	NULL	-	no_errors	C22orf34	HGNC	ENSG00000188511	tier1	-	-	119	0	0.00	141	16	10.19
C2orf80	0	genome.wustl.edu	37	2	209049741	209049741	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	209049741	209049741	G	T	SNP	C2orf80	ENST00000341287	human	ensembl	74_37	-1	known	silent	c.57	p.G19	1.000	NULL	NULL	-	no_errors	C2orf80	HGNC	ENSG00000188674	tier1	-	-	56	0	0.00	59	4	6.35
C4BPA	0	genome.wustl.edu	37	1	207307755	207307755	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	207307755	207307755	G	T	SNP	C4BPA	ENST00000367070	human	ensembl	74_37	+1	known	missense	c.1091	p.C364F	0.939	superfamily_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	C4BPA	HGNC	ENSG00000123838	tier1	-	-	64	0	0.00	92	5	5.15
C4orf47	0	genome.wustl.edu	37	4	186361817	186361817	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	186361817	186361817	G	C	SNP	C4orf47	ENST00000378850	human	ensembl	74_37	+1	known	missense	c.658	p.E220Q	0.017	NULL	NULL	-	no_errors	C4orf47	HGNC	ENSG00000205129	tier1	-	-	58	0	0.00	64	4	5.88
C6orf136	0	genome.wustl.edu	37	6	30615067	30615067	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	30615067	30615067	A	T	SNP	C6orf136	ENST00000293604	human	ensembl	74_37	+1	known	missense	c.59	p.Q20L	1.000	NULL	pfam_DUF2358	-	no_errors	C6orf136	HGNC	ENSG00000204564	tier1	-	-	60	0	0.00	89	10	10.10
C7orf63	0	genome.wustl.edu	37	7	89900935	89900935	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	89900935	89900935	C	T	SNP	C7orf63	ENST00000389297	human	ensembl	74_37	+1	known	nonsense	c.628	p.Q210*	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	C7orf63	HGNC	ENSG00000105792	tier1	-	-	58	0	0.00	82	5	5.75
CA5A	0	genome.wustl.edu	37	16	87970095	87970095	+	RNA	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	87970095	87970095	G	C	SNP	CA5A	ENST00000568801	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CA5A	HGNC	ENSG00000174990	tier1	-	-	66	0	0.00	86	7	7.37
CABP5	0	genome.wustl.edu	37	19	48537601	48537601	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	48537601	48537601	C	G	SNP	CABP5	ENST00000293255	human	ensembl	74_37	-1	known	missense	c.367	p.G123R	1.000	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CABP5	HGNC	ENSG00000105507	tier1	-	-	70	0	0.00	72	4	5.26
CACNA1A	0	genome.wustl.edu	37	19	13410024	13410024	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	13410024	13410024	G	T	SNP	CACNA1A	ENST00000360228	human	ensembl	74_37	-1	known	missense	c.2423	p.T808K	0.252	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_P/Q_a1su	-	no_errors	CACNA1A	HGNC	ENSG00000141837	tier1	-	-	127	0	0.00	157	14	8.19
CACNA1C	0	genome.wustl.edu	37	12	2760889	2760889	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	2760889	2760889	G	T	SNP	CACNA1C	ENST00000399634	human	ensembl	74_37	+1	known	silent	c.4029	p.G1343	1.000	pfam_Ion_trans_dom,pfam_PKD1_2_channel	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCC_L_a1csu,prints_VDCCAlpha1,prints_VDCC_L_a1su	-	no_errors	CACNA1C	HGNC	ENSG00000151067	tier1	-	-	54	0	0.00	56	10	15.15
CACNA1D	0	genome.wustl.edu	37	3	53766862	53766862	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	53766862	53766862	G	T	SNP	CACNA1D	ENST00000288139	human	ensembl	74_37	+1	known	nonsense	c.2554	p.E852*	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,prints_VDCCAlpha1,prints_VDCC_L_a1su,prints_LVDCC_a1dsu	-	no_errors	CACNA1D	HGNC	ENSG00000157388	tier1	-	-	65	0	0.00	67	5	6.94
CACNA1E	0	genome.wustl.edu	37	1	181767767	181767767	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	181767767	181767767	G	T	SNP	CACNA1E	ENST00000367573	human	ensembl	74_37	+1	known	nonsense	c.6739	p.E2247*	1.000	NULL	pfam_Ion_trans_dom,pfam_VDCC_a1su_IQ,pfam_PKD1_2_channel,pfscan_EF_hand_dom,prints_VDCCAlpha1,prints_VDCC_R_a1su	-	no_errors	CACNA1E	HGNC	ENSG00000198216				51	0	0.00	55	4	6.78
CACNA1I	0	genome.wustl.edu	37	22	39996623	39996623	+	Silent	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	22	39996623	39996623	A	T	SNP	CACNA1I	ENST00000336649	human	ensembl	74_37	+1	known	silent	c.447	p.T149	0.058	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_VDCCAlpha1	-	no_errors	CACNA1I	HGNC	ENSG00000100346				62	0	0.00	72	4	5.26
CAGE1	0	genome.wustl.edu	37	6	7373495	7373496	+	Frame_Shift_Ins	INS	-	-	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	7373495	7373496	-	A	INS	CAGE1	ENST00000338150	human	ensembl	74_37	-1	known	frame_shift_ins	c.1557_1556	p.L519fs	0.978:0.976	NULL	NULL	-	no_errors	CAGE1	HGNC	ENSG00000164304	tier1			51	0	0.00	48	10	17.24
CALML5	0	genome.wustl.edu	37	10	5541125	5541125	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	5541125	5541125	C	A	SNP	CALML5	ENST00000380332	human	ensembl	74_37	-1	known	missense	c.277	p.D93Y	0.009	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	pfam_EF_hand_dom,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	CALML5	HGNC	ENSG00000178372				11	0	0.00	12	4	25.00
CAPN8	0	genome.wustl.edu	37	1	223718144	223718144	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	223718144	223718144	G	T	SNP	CAPN8	ENST00000366872	human	ensembl	74_37	-1	known	silent	c.1836	p.L612	0.995	NULL	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,smart_Calpain_III,pfscan_EF_hand_dom,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN8	HGNC	ENSG00000203697	tier1	-	-	51	0	0.00	60	10	14.29
CAPRIN1	0	genome.wustl.edu	37	11	34074014	34074014	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	34074014	34074014	G	T	SNP	CAPRIN1	ENST00000341394	human	ensembl	74_37	+1	known	missense	c.47	p.G16V	0.995	NULL	pfam_Caprin-1_C	-	no_errors	CAPRIN1	HGNC	ENSG00000135387				62	0	0.00	50	4	7.41
CCDC104	0	genome.wustl.edu	37	2	55762900	55762900	+	Splice_Site	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	55762900	55762900	G	A	SNP	CCDC104	ENST00000339012	human	ensembl	74_37	+1	known	splice_site	c.612+1	e7+1	1.000	-	-	-	no_errors	CCDC104	HGNC	ENSG00000163001	tier1	-	-	46	0	0.00	63	4	5.97
CCDC144A	0	genome.wustl.edu	37	17	16612402	16612402	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	16612402	16612402	G	T	SNP	CCDC144A	ENST00000360524	human	ensembl	74_37	+1	known	missense	c.1031	p.C344F	0.001	NULL	pfam_DUF3496	-	no_errors	CCDC144A	HGNC	ENSG00000170160	tier1	-	-	242	0	0.00	297	22	6.90
CCDC15	0	genome.wustl.edu	37	11	124845083	124845083	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	124845083	124845083	G	A	SNP	CCDC15	ENST00000344762	human	ensembl	74_37	+1	known	missense	c.608	p.R203K	0.000	NULL	NULL	-	no_errors	CCDC15	HGNC	ENSG00000149548				41	0	0.00	60	4	6.25
CCDC7	0	genome.wustl.edu	37	10	32856778	32856778	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	32856778	32856778	G	A	SNP	CCDC7	ENST00000277657	human	ensembl	74_37	+1	known	missense	c.1378	p.G460S	0.001	NULL	NULL	-	no_errors	CCDC7	HGNC	ENSG00000216937	tier1	-	-	16	0	0.00	14	5	26.32
CCER1	0	genome.wustl.edu	37	12	91348442	91348442	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	91348442	91348442	C	G	SNP	CCER1	ENST00000358859	human	ensembl	74_37	-1	known	missense	c.78	p.W26C	0.889	NULL	NULL	-	no_errors	CCER1	HGNC	ENSG00000197651	tier1	-	-	38	0	0.00	42	6	12.50
CCL18	0	genome.wustl.edu	37	17	34398331	34398331	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	34398331	34398331	G	T	SNP	CCL18	ENST00000004921	human	ensembl	74_37	+1	known	missense	c.200	p.R67L	0.029	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	pfam_Chemokine_IL8-like_dom,superfamily_Chemokine_IL8-like_dom,smart_Chemokine_IL8-like_dom	-	no_errors	CCL18	HGNC	ENSG00000006074	tier1	-	-	276	0	0.00	256	29	10.14
CCNB1IP1	0	genome.wustl.edu	37	14	20779823	20779823	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	20779823	20779823	C	A	SNP	CCNB1IP1	ENST00000353689	human	ensembl	74_37	-1	known	silent	c.720	p.A240	1.000	NULL	NULL	-	no_errors	CCNB1IP1	HGNC	ENSG00000100814	tier1	-	-	60	0	0.00	72	7	8.86
CCNT2	0	genome.wustl.edu	37	2	135705377	135705377	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	135705377	135705377	G	T	SNP	CCNT2	ENST00000264157	human	ensembl	74_37	+1	known	missense	c.611	p.C204F	1.000	superfamily_Cyclin-like,smart_Cyclin-like	pfam_Cyclin_N,superfamily_Cyclin-like,smart_Cyclin-like	-	no_errors	CCNT2	HGNC	ENSG00000082258	tier1	-	-	67	0	0.00	84	10	10.64
CCNY	0	genome.wustl.edu	37	10	35819102	35819102	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	35819102	35819102	G	T	SNP	CCNY	ENST00000374704	human	ensembl	74_37	+1	known	missense	c.510	p.Q170H	1.000	pfam_Cyclin_N,pfam_Cyclin_PHO80-like,superfamily_Cyclin-like,pirsf_Cyclin_Y	pfam_Cyclin_N,pfam_Cyclin_PHO80-like,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_Y	-	no_errors	CCNY	HGNC	ENSG00000108100	tier1	-	-	45	0	0.00	51	14	21.21
CCT3	0	genome.wustl.edu	37	1	156279014	156279014	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	156279014	156279014	C	A	SNP	CCT3	ENST00000295688	human	ensembl	74_37	-1	known	silent	c.1614	p.G538	0.993	NULL	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_gamma	-	no_errors	CCT3	HGNC	ENSG00000163468	tier1	-	-	68	0	0.00	74	7	8.64
CD200R1L	0	genome.wustl.edu	37	3	112545840	112545840	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	112545840	112545840	C	G	SNP	CD200R1L	ENST00000398214	human	ensembl	74_37	-1	known	missense	c.679	p.G227R	0.014	NULL	pfam_CD80_C2-set,pfscan_Ig-like_dom	-	no_errors	CD200R1L	HGNC	ENSG00000206531	tier1	-	-	56	0	0.00	63	4	5.97
CDCA8	0	genome.wustl.edu	37	1	38166128	38166128	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	38166128	38166128	G	T	SNP	CDCA8	ENST00000327331	human	ensembl	74_37	+1	known	missense	c.358	p.D120Y	0.998	NULL	pfam_Cell_div_borealin,pfam_Borealin-like_N	-	no_errors	CDCA8	HGNC	ENSG00000134690	tier1	-	-	66	0	0.00	66	14	17.07
CDH22	0	genome.wustl.edu	37	20	44856180	44856180	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	44856180	44856180	C	A	SNP	CDH22	ENST00000372262	human	ensembl	74_37	-1	known	missense	c.637	p.G213C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,superfamily_MFS_dom_general_subst_transpt,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH22	HGNC	ENSG00000149654	tier1	-	-	88	0	0.00	109	12	9.92
CDH23	0	genome.wustl.edu	37	10	73571509	73571509	+	Silent	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	73571509	73571509	T	A	SNP	CDH23	ENST00000398788	human	ensembl	74_37	+1	known	silent	c.2598	p.A866	0.953	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH23	HGNC	ENSG00000107736	tier1	-	-	59	0	0.00	49	6	10.53
CDH4	0	genome.wustl.edu	37	20	60499458	60499458	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	60499458	60499458	G	T	SNP	CDH4	ENST00000360469	human	ensembl	74_37	+1	known	silent	c.1695	p.T565	0.047	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,pfam_Cadherin_pro_dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin,prints_Cadherin/Desmocollin	-	no_errors	CDH4	HGNC	ENSG00000179242	tier1	-	-	53	0	0.00	80	6	6.98
CDH7	0	genome.wustl.edu	37	18	63489458	63489458	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	18	63489458	63489458	A	T	SNP	CDH7	ENST00000323011	human	ensembl	74_37	+1	known	missense	c.767	p.N256I	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH7	HGNC	ENSG00000081138	tier1	-	-	47	0	0.00	52	4	7.14
CEACAM18	0	genome.wustl.edu	37	19	51986279	51986279	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	51986279	51986279	G	C	SNP	CEACAM18	ENST00000451626	human	ensembl	74_37	+1	known	missense	c.865	p.D289H	0.001	pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CEACAM18	HGNC	ENSG00000213822				52	0	0.00	52	3	5.45
CELF3	0	genome.wustl.edu	37	1	151679697	151679697	+	Nonsense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	151679697	151679697	G	C	SNP	CELF3	ENST00000290583	human	ensembl	74_37	-1	known	nonsense	c.846	p.Y282*	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CELF3	HGNC	ENSG00000159409	tier1	-	-	36	0	0.00	53	9	14.52
CENPA	0	genome.wustl.edu	37	2	27015647	27015647	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	27015647	27015647	C	T	SNP	CENPA	ENST00000335756	human	ensembl	74_37	+1	known	silent	c.234	p.F78	0.998	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	CENPA	HGNC	ENSG00000115163	tier1	-	-	43	0	0.00	58	7	10.77
CENPB	0	genome.wustl.edu	37	20	3767129	3767129	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	3767129	3767129	A	G	SNP	CENPB	ENST00000379751	human	ensembl	74_37	-1	known	missense	c.2	p.M1T	1.000	superfamily_Homeodomain-like,pfscan_HTH_Psq	pfam_Centromere_CenpB_dimerisation,pfam_DDE_SF_endonuclease_CENPB-like,pfam_HTH_Psq,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Homeodomain-like,smart_HTH_CenpB_DNA-bd_dom,pfscan_HTH_Psq	-	no_errors	CENPB	HGNC	ENSG00000125817				35	0	0.00	45	4	8.16
CENPF	0	genome.wustl.edu	37	1	214814241	214814241	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	214814241	214814241	G	T	SNP	CENPF	ENST00000366955	human	ensembl	74_37	+1	known	nonsense	c.2560	p.E854*	1.000	NULL	pfam_Centromere_CenpF_N,pfam_Centromere_CenpF_leu-rich_rpt,pfam_CenpF/LEK1_Rb-prot-bd	-	no_errors	CENPF	HGNC	ENSG00000117724				22	0	0.00	38	3	7.32
CEP250	0	genome.wustl.edu	37	20	34055253	34055253	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	34055253	34055253	G	T	SNP	CEP250	ENST00000397527	human	ensembl	74_37	+1	known	nonsense	c.724	p.E242*	0.863	NULL	superfamily_Prefoldin	-	no_errors	CEP250	HGNC	ENSG00000126001	tier1	-	-	42	0	0.00	43	7	14.00
CFTR	0	genome.wustl.edu	37	7	117235030	117235030	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	117235030	117235030	G	T	SNP	CFTR	ENST00000003084	human	ensembl	74_37	+1	known	missense	c.2537	p.W846L	1.000	superfamily_ABC1_TM_dom,tigrfam_cAMP_cl_channel	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,prints_CysFib_conduc_TM,tigrfam_cAMP_cl_channel	-	no_errors	CFTR	HGNC	ENSG00000001626	tier1	-	-	60	0	0.00	70	9	11.39
CHKA	0	genome.wustl.edu	37	11	67837676	67837676	+	Silent	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	67837676	67837676	G	C	SNP	CHKA	ENST00000265689	human	ensembl	74_37	-1	known	silent	c.849	p.P283	0.854	pfam_Aminoglycoside_PTrfase,pfam_DUF227,superfamily_Kinase-like_dom	pfam_Aminoglycoside_PTrfase,pfam_DUF227,superfamily_Kinase-like_dom	-	no_errors	CHKA	HGNC	ENSG00000110721	tier1	-	-	91	0	0.00	108	11	9.24
CHST2	0	genome.wustl.edu	37	3	142840873	142840873	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	142840873	142840873	G	T	SNP	CHST2	ENST00000309575	human	ensembl	74_37	+1	known	silent	c.1215	p.T405	0.991	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase,pirsf_Carbohydrate_sulfotransferase	-	no_errors	CHST2	HGNC	ENSG00000175040	tier1	-	-	43	0	0.00	44	8	15.38
CHUK	0	genome.wustl.edu	37	10	101954272	101954272	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	101954272	101954272	G	T	SNP	CHUK	ENST00000370397	human	ensembl	74_37	-1	known	missense	c.1736	p.S579Y	0.987	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_IKKbetaNEMObind,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	CHUK	HGNC	ENSG00000213341				20	0	0.00	22	2	8.33
CINP	0	genome.wustl.edu	37	14	102815064	102815064	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	102815064	102815064	T	A	SNP	CINP	ENST00000536961	human	ensembl	74_37	-1	known	missense	c.514	p.R172W	0.000	prints_Cyclin-dep_Kinase_2_interact	prints_Cyclin-dep_Kinase_2_interact	-	no_errors	CINP	HGNC	ENSG00000100865	tier1	-	-	30	0	0.00	24	5	17.24
CLCN4	0	genome.wustl.edu	37	X	10180566	10180566	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	10180566	10180566	G	T	SNP	CLCN4	ENST00000380833	human	ensembl	74_37	+1	known	silent	c.1449	p.V483	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-4	-	no_errors	CLCN4	HGNC	ENSG00000073464				69	0	0.00	64	5	7.25
CLCNKA	0	genome.wustl.edu	37	1	16357020	16357020	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	16357020	16357020	G	T	SNP	CLCNKA	ENST00000331433	human	ensembl	74_37	+1	known	silent	c.1473	p.L491	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-K	-	no_errors	CLCNKA	HGNC	ENSG00000186510	tier1	-	-	99	0	0.00	83	5	5.68
CLIP2	0	genome.wustl.edu	37	7	73731997	73731997	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	73731997	73731997	G	T	SNP	CLIP2	ENST00000223398	human	ensembl	74_37	+1	known	missense	c.121	p.G41C	1.000	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_t-SNARE,pfscan_CAP-Gly_domain	-	no_errors	CLIP2	HGNC	ENSG00000106665	tier1	-	-	152	0	0.00	151	13	7.88
CLPSL2	0	genome.wustl.edu	37	6	35747261	35747261	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	35747261	35747261	G	T	SNP	CLPSL2	ENST00000360454	human	ensembl	74_37	+1	known	missense	c.416	p.G139V	0.001	NULL	NULL	-	no_errors	CLPSL2	HGNC	ENSG00000196748				47	0	0.00	44	4	8.33
CNGA2	0	genome.wustl.edu	37	X	150909341	150909341	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	150909341	150909341	C	A	SNP	CNGA2	ENST00000329903	human	ensembl	74_37	+1	known	silent	c.450	p.P150	0.942	NULL	pfam_Ion_trans_dom,pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	-	no_errors	CNGA2	HGNC	ENSG00000183862				42	0	0.00	41	3	6.82
COL10A1	0	genome.wustl.edu	37	6	116441947	116441947	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	116441947	116441947	G	T	SNP	COL10A1	ENST00000243222	human	ensembl	74_37	-1	known	silent	c.1332	p.A444	0.000	NULL	pfam_Collagen,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	COL10A1	HGNC	ENSG00000123500	tier1	-	-	65	0	0.00	74	5	6.33
COL12A1	0	genome.wustl.edu	37	6	75843646	75843646	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	75843646	75843646	C	T	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	nonsense	c.5592	p.W1864*	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1	-	-	57	0	0.00	81	7	7.95
COL19A1	0	genome.wustl.edu	37	6	70646735	70646735	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	70646735	70646735	G	T	SNP	COL19A1	ENST00000322773	human	ensembl	74_37	+1	known	missense	c.806	p.S269I	0.057	NULL	pfam_Collagen,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL19A1	HGNC	ENSG00000082293	tier1	-	-	66	0	0.00	66	4	5.71
COL22A1	0	genome.wustl.edu	37	8	139815144	139815144	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	8	139815144	139815144	G	C	SNP	COL22A1	ENST00000303045	human	ensembl	74_37	-1	known	missense	c.1528	p.P510A	0.952	NULL	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC	ENSG00000169436	tier1	-	-	59	0	0.00	74	13	14.94
COL3A1	0	genome.wustl.edu	37	2	189867045	189867045	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	189867045	189867045	C	A	SNP	COL3A1	ENST00000304636	human	ensembl	74_37	+1	known	missense	c.2413	p.P805T	0.997	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_VWF_C,superfamily_Fibrinogen_a/b/g_C_dom,smart_VWF_C,smart_Fib_collagen_C,pfscan_VWF_C	-	no_errors	COL3A1	HGNC	ENSG00000168542				105	0	0.00	82	5	5.75
CPAMD8	0	genome.wustl.edu	37	19	17088273	17088273	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	17088273	17088273	G	T	SNP	CPAMD8	ENST00000443236	human	ensembl	74_37	-1	known	missense	c.1804	p.P602T	1.000	pfam_A2M_N_2	pfam_A2M_comp,pfam_A2M_N_2,pfam_Methyltransf_FA,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,pfam_Kazal_dom,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd,smart_Kazal_dom	-	no_errors	CPAMD8	HGNC	ENSG00000160111	tier1	-	-	52	0	0.00	46	7	13.21
CPED1	0	genome.wustl.edu	37	7	120907296	120907296	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	120907296	120907296	C	A	SNP	CPED1	ENST00000310396	human	ensembl	74_37	+1	known	silent	c.2661	p.I887	1.000	NULL	NULL	-	no_errors	CPED1	HGNC	ENSG00000106034				54	0	0.00	48	3	5.88
CRB1	0	genome.wustl.edu	37	1	197316469	197316469	+	Splice_Site	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	197316469	197316469	G	T	SNP	CRB1	ENST00000367400	human	ensembl	74_37	+1	known	splice_site	c.849-1	e4-1	0.998	-	-	-	no_errors	CRB1	HGNC	ENSG00000134376	tier1	-	-	47	0	0.00	66	9	12.00
CREBBP	0	genome.wustl.edu	37	16	3778029	3778029	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	3778029	3778029	C	T	SNP	CREBBP	ENST00000262367	human	ensembl	74_37	-1	known	missense	c.7019	p.S2340N	1.000	NULL	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339	tier1	-	-	111	0	0.00	120	8	6.25
CRTC3	0	genome.wustl.edu	37	15	91136924	91136924	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	15	91136924	91136924	G	C	SNP	CRTC3	ENST00000268184	human	ensembl	74_37	+1	known	missense	c.288	p.E96D	1.000	NULL	NULL	-	no_errors	CRTC3	HGNC	ENSG00000140577	tier1	-	-	86	0	0.00	91	5	5.21
CSMD3	0	genome.wustl.edu	37	8	114326869	114326869	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	8	114326869	114326869	G	C	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.332	p.A111G	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	52	0	0.00	64	10	13.51
CTAGE1	0	genome.wustl.edu	37	18	19997426	19997426	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	18	19997426	19997426	A	T	SNP	CTAGE1	ENST00000391403	human	ensembl	74_37	-1	known	missense	c.349	p.C117S	0.163	NULL	NULL	-	no_errors	CTAGE1	HGNC	ENSG00000212710	tier1	-	-	149	0	0.00	163	12	6.86
CTSG	0	genome.wustl.edu	37	14	25043995	25043995	+	Silent	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	25043995	25043995	G	C	SNP	CTSG	ENST00000216336	human	ensembl	74_37	-1	known	silent	c.225	p.G75	0.992	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	CTSG	HGNC	ENSG00000100448	tier1	-	-	64	0	0.00	67	10	12.99
CTSL	0	genome.wustl.edu	37	9	90343008	90343008	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	90343008	90343008	G	C	SNP	CTSL	ENST00000340342	human	ensembl	74_37	+1	known	missense	c.193	p.E65Q	1.000	pfam_Prot_inhib_I29,smart_Prot_inhib_I29	pfam_Peptidase_C1A_C,pfam_Prot_inhib_I29,smart_Prot_inhib_I29,smart_Peptidase_C1A_C,prints_Peptidase_C1A_C	-	no_errors	CTSL	HGNC	ENSG00000135047	tier1	-	-	257	0	0.00	235	31	11.65
CUBN	0	genome.wustl.edu	37	10	16992031	16992031	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	16992031	16992031	C	A	SNP	CUBN	ENST00000377833	human	ensembl	74_37	-1	known	missense	c.5049	p.L1683F	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	CUBN	HGNC	ENSG00000107611	tier1	-	-	51	0	0.00	70	5	6.67
DACH2	0	genome.wustl.edu	37	X	85994826	85994826	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	85994826	85994826	A	T	SNP	DACH2	ENST00000373125	human	ensembl	74_37	+1	known	missense	c.1181	p.H394L	0.998	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	DACH2	HGNC	ENSG00000126733	tier1	-	-	64	0	0.00	77	9	10.47
DACH2	0	genome.wustl.edu	37	X	86071037	86071037	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	86071037	86071037	A	G	SNP	DACH2	ENST00000373125	human	ensembl	74_37	+1	known	missense	c.1685	p.D562G	1.000	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	DACH2	HGNC	ENSG00000126733	tier1	-	-	134	0	0.00	130	9	6.47
DCAF8L1	0	genome.wustl.edu	37	X	27998866	27998866	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	27998866	27998866	C	A	SNP	DCAF8L1	ENST00000441525	human	ensembl	74_37	-1	known	missense	c.586	p.A196S	0.813	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF8L1	HGNC	ENSG00000226372	tier1	-	-	117	0	0.00	111	6	5.13
DCHS2	0	genome.wustl.edu	37	4	155287589	155287589	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	155287589	155287589	C	A	SNP	DCHS2	ENST00000357232	human	ensembl	74_37	-1	known	missense	c.467	p.G156V	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_HTH_CenpB_DNA-bd_dom,superfamily_Cadherin-like,superfamily_Homeodomain-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410				51	0	0.00	58	5	7.94
DEPDC5	0	genome.wustl.edu	37	22	32293528	32293528	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	22	32293528	32293528	G	T	SNP	DEPDC5	ENST00000266091	human	ensembl	74_37	+1	known	missense	c.4198	p.G1400W	1.000	NULL	pfam_IML1,pfam_DEP_dom,smart_DEP_dom,pfscan_DEP_dom	-	no_errors	DEPDC5	HGNC	ENSG00000100150	tier1	-	-	53	0	0.00	65	4	5.80
DGAT2L6	0	genome.wustl.edu	37	X	69421794	69421794	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	69421794	69421794	C	A	SNP	DGAT2L6	ENST00000333026	human	ensembl	74_37	+1	known	nonsense	c.527	p.S176*	1.000	pfam_DAGAT	pfam_DAGAT	-	no_errors	DGAT2L6	HGNC	ENSG00000184210	tier1	-	-	69	0	0.00	69	8	10.39
DHRS4L1	0	genome.wustl.edu	37	14	24520164	24520164	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	24520164	24520164	C	A	SNP	DHRS4L1	ENST00000558293	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-468E2.9	Clone_based_vega_gene	ENSG00000225766	tier1	-	-	98	0	0.00	131	10	7.09
DHX8	0	genome.wustl.edu	37	17	41561514	41561514	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	41561514	41561514	G	A	SNP	DHX8	ENST00000262415	human	ensembl	74_37	+1	known	missense	c.109	p.E37K	1.000	NULL	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX8	HGNC	ENSG00000067596	tier1	-	-	112	0	0.00	100	7	6.54
DHX8	0	genome.wustl.edu	37	17	41571102	41571102	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	41571102	41571102	C	T	SNP	DHX8	ENST00000262415	human	ensembl	74_37	+1	known	missense	c.1060	p.L354F	0.759	superfamily_NA-bd_OB-fold	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX8	HGNC	ENSG00000067596	tier1	-	-	124	0	0.00	105	27	20.45
DLC1	0	genome.wustl.edu	37	8	13072192	13072192	+	Silent	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	8	13072192	13072192	A	T	SNP	DLC1	ENST00000316609	human	ensembl	74_37	-1	known	silent	c.1440	p.P480	1.000	NULL	NULL	-	no_errors	DLC1	HGNC	ENSG00000164741	tier1	-	-	113	0	0.00	83	12	12.63
DLG4	0	genome.wustl.edu	37	17	7096810	7096810	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	7096810	7096810	C	A	SNP	DLG4	ENST00000399510	human	ensembl	74_37	-1	known	missense	c.1814	p.C605F	1.000	pirsf_M-assoc_guanylate_kinase,pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pirsf_M-assoc_guanylate_kinase,pfam_GK/Ca_channel_bsu,pfam_PDZ,pfam_PDZ_assoc,pfam_MAGUK_PEST_N,pfam_SH3_domain,pfam_SH3_2,pfam_L27_1,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	DLG4	HGNC	ENSG00000132535				83	0	0.00	80	6	6.98
DMBX1	0	genome.wustl.edu	37	1	46978148	46978148	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	46978148	46978148	C	A	SNP	DMBX1	ENST00000371956	human	ensembl	74_37	+1	known	silent	c.1131	p.L377	0.610	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	DMBX1	HGNC	ENSG00000197587	tier1	-	-	54	0	0.00	67	9	11.84
DMD	0	genome.wustl.edu	37	X	32481653	32481653	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	32481653	32481653	C	A	SNP	DMD	ENST00000357033	human	ensembl	74_37	-1	known	missense	c.3335	p.G1112V	0.998	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin,pirsf_Dystrophin/utrophin	pfam_Spectrin_repeat,pfam_EF-hand_dom_typ1,pfam_EF-hand_dom_typ2,pfam_CH-domain,pfam_Znf_ZZ,pfam_WW_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_WW_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_WW_dom,smart_Znf_ZZ,pirsf_Dystrophin/utrophin,pfscan_CH-domain,pfscan_WW_dom,pfscan_Znf_ZZ	-	no_errors	DMD	HGNC	ENSG00000198947	tier1	-	-	71	0	0.00	83	5	5.68
DNAH14	0	genome.wustl.edu	37	1	225519255	225519255	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	225519255	225519255	A	T	SNP	DNAH14	ENST00000430092	human	ensembl	74_37	+1	known	missense	c.9561	p.L3187F	0.141	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,superfamily_P-loop_NTPase,superfamily_Tautomerase/MIF_sf,smart_AAA+_ATPase	-	no_errors	DNAH14	HGNC	ENSG00000185842	tier1	-	-	39	0	0.00	57	6	9.52
DNAJA3	0	genome.wustl.edu	37	16	4492341	4492341	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	4492341	4492341	A	T	SNP	DNAJA3	ENST00000262375	human	ensembl	74_37	+1	known	missense	c.703	p.T235S	0.015	pfam_HSP_DnaJ_Cys-rich_dom,superfamily_HSP_DnaJ_Cys-rich_dom,superfamily_HSP40/DnaJ_pept-bd,pfscan_HSP_DnaJ_Cys-rich_dom	pfam_DnaJ_domain,pfam_DnaJ_C,pfam_HSP_DnaJ_Cys-rich_dom,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,superfamily_HSP_DnaJ_Cys-rich_dom,smart_DnaJ_domain,pfscan_DnaJ_domain,pfscan_HSP_DnaJ_Cys-rich_dom,prints_DnaJ_domain	-	no_errors	DNAJA3	HGNC	ENSG00000103423				62	0	0.00	55	3	5.08
DNAJA3	0	genome.wustl.edu	37	16	4496970	4496970	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	4496970	4496970	G	T	SNP	DNAJA3	ENST00000262375	human	ensembl	74_37	+1	known	silent	c.1080	p.G360	0.709	pfam_DnaJ_C,superfamily_HSP40/DnaJ_pept-bd	pfam_DnaJ_domain,pfam_DnaJ_C,pfam_HSP_DnaJ_Cys-rich_dom,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,superfamily_HSP_DnaJ_Cys-rich_dom,smart_DnaJ_domain,pfscan_DnaJ_domain,pfscan_HSP_DnaJ_Cys-rich_dom,prints_DnaJ_domain	-	no_errors	DNAJA3	HGNC	ENSG00000103423				48	0	0.00	58	4	6.45
DPF3	0	genome.wustl.edu	37	14	73190435	73190435	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	73190435	73190435	C	G	SNP	DPF3	ENST00000366353	human	ensembl	74_37	-1	known	missense	c.596	p.R199T	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	DPF3	HGNC	ENSG00000205683	tier1	-	-	118	0	0.00	144	14	8.86
DRAM2	0	genome.wustl.edu	37	1	111674115	111674115	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	111674115	111674115	G	A	SNP	DRAM2	ENST00000286692	human	ensembl	74_37	-1	known	missense	c.62	p.A21V	1.000	pfam_Frag1/DRAM/Sfk1	pfam_Frag1/DRAM/Sfk1	-	no_errors	DRAM2	HGNC	ENSG00000156171	tier1	-	-	60	0	0.00	76	4	5.00
DRAXIN	0	genome.wustl.edu	37	1	11766385	11766385	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	11766385	11766385	C	A	SNP	DRAXIN	ENST00000294485	human	ensembl	74_37	+1	known	missense	c.70	p.L24M	0.003	NULL	NULL	-	no_errors	DRAXIN	HGNC	ENSG00000162490	tier1	-	-	72	0	0.00	90	9	9.09
DRAXIN	0	genome.wustl.edu	37	1	11766386	11766386	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	11766386	11766386	T	A	SNP	DRAXIN	ENST00000294485	human	ensembl	74_37	+1	known	missense	c.71	p.L24Q	0.000	NULL	NULL	-	no_errors	DRAXIN	HGNC	ENSG00000162490	tier1	-	-	71	0	0.00	90	9	9.09
DSCAML1	0	genome.wustl.edu	37	11	117395568	117395568	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	117395568	117395568	T	A	SNP	DSCAML1	ENST00000321322	human	ensembl	74_37	-1	known	missense	c.1069	p.T357S	1.000	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DSCAML1	HGNC	ENSG00000177103	tier1	-	-	82	0	0.00	75	11	12.79
DUXA	0	genome.wustl.edu	37	19	57670600	57670600	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	57670600	57670600	G	T	SNP	DUXA	ENST00000554048	human	ensembl	74_37	-1	known	missense	c.227	p.P76Q	0.008	superfamily_Homeodomain-like,smart_Homeobox_dom	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	DUXA	HGNC	ENSG00000258873	tier1	-	-	67	0	0.00	59	9	13.24
DYRK1A	0	genome.wustl.edu	37	21	38878463	38878463	+	Silent	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	21	38878463	38878463	G	A	SNP	DYRK1A	ENST00000398960	human	ensembl	74_37	+1	known	silent	c.1608	p.R536	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	DYRK1A	HGNC	ENSG00000157540	tier1	-	-	31	0	0.00	35	4	10.26
E2F6	0	genome.wustl.edu	37	2	11591836	11591836	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	11591836	11591836	C	A	SNP	E2F6	ENST00000381525	human	ensembl	74_37	-1	known	missense	c.477	p.E159D	0.996	NULL	pfam_E2F_TDP	-	no_errors	E2F6	HGNC	ENSG00000169016	tier1	-	-	51	0	0.00	70	10	12.50
EIF4A3	0	genome.wustl.edu	37	17	78117984	78117984	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	78117984	78117984	C	G	SNP	EIF4A3	ENST00000269349	human	ensembl	74_37	-1	known	missense	c.229	p.D77H	0.999	pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	EIF4A3	HGNC	ENSG00000141543	tier1	-	-	86	0	0.00	86	24	21.82
ELAVL4	0	genome.wustl.edu	37	1	50661318	50661318	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	50661318	50661318	C	T	SNP	ELAVL4	ENST00000371821	human	ensembl	74_37	+1	known	silent	c.609	p.P203	0.993	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL4	HGNC	ENSG00000162374	tier1	-	-	88	0	0.00	111	11	9.02
ELN	0	genome.wustl.edu	37	7	73474214	73474214	+	Splice_Site	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	73474214	73474214	A	T	SNP	ELN	ENST00000320399	human	ensembl	74_37	+1	known	splice_site	c.1415-2	e23-2	0.703	-	-	-	no_errors	ELN	HGNC	ENSG00000049540	tier1	-	-	105	0	0.00	117	9	7.14
ELOVL5	0	genome.wustl.edu	37	6	53140028	53140028	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	53140028	53140028	G	C	SNP	ELOVL5	ENST00000541407	human	ensembl	74_37	-1	known	missense	c.437	p.S146C	1.000	pfam_GNS1_SUR4	pfam_GNS1_SUR4	-	no_errors	ELOVL5	HGNC	ENSG00000012660	tier1	-	-	72	0	0.00	103	10	8.85
EMC1	0	genome.wustl.edu	37	1	19565849	19565849	+	RNA	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	19565849	19565849	G	A	SNP	EMC1	ENST00000467423	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.062	-	-	-	no_errors	EMC1	HGNC	ENSG00000127463	tier1	-	-	33	0	0.00	48	4	7.69
EMR4P	0	genome.wustl.edu	37	19	6971215	6971215	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	6971215	6971215	G	T	SNP	EMR4P	ENST00000600751	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.981	-	-	-	no_errors	EMR4P	HGNC	ENSG00000268758	tier1	-	-	67	0	0.00	65	9	12.16
EMR4P	0	genome.wustl.edu	37	19	6972268	6972268	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	6972268	6972268	C	A	SNP	EMR4P	ENST00000600751	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.023	-	-	-	no_errors	EMR4P	HGNC	ENSG00000268758	tier1	-	-	83	0	0.00	76	8	9.52
ENAM	0	genome.wustl.edu	37	4	71508513	71508513	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	71508513	71508513	C	T	SNP	ENAM	ENST00000396073	human	ensembl	74_37	+1	known	missense	c.1370	p.P457L	0.867	NULL	NULL	-	no_errors	ENAM	HGNC	ENSG00000132464	tier1	-	-	57	0	0.00	69	13	15.85
ENGASE	0	genome.wustl.edu	37	17	77082110	77082110	+	Silent	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	77082110	77082110	G	A	SNP	ENGASE	ENST00000579016	human	ensembl	74_37	+1	known	silent	c.1911	p.E637	0.006	NULL	pfam_Glyco_hydro_85,pfscan_BRCT_dom	-	no_errors	ENGASE	HGNC	ENSG00000167280	tier1	-	-	80	0	0.00	100	6	5.66
ENPEP	0	genome.wustl.edu	37	4	111436598	111436598	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	111436598	111436598	G	T	SNP	ENPEP	ENST00000265162	human	ensembl	74_37	+1	known	missense	c.1509	p.Q503H	1.000	NULL	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	ENPEP	HGNC	ENSG00000138792	tier1	-	-	47	0	0.00	51	4	7.27
ENSG00000188971	0	genome.wustl.edu	37	2	69691701	69691701	+	RNA	SNP	A	A	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	69691701	69691701	A	C	SNP	ENSG00000188971	ENST00000606389	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	RP11-427H3.3	Clone_based_vega_gene	ENSG00000188971	tier1	-	-	49	0	0.00	48	6	11.11
ENSG00000203849	0	genome.wustl.edu	37	1	142711340	142711340	+	RNA	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	142711340	142711340	T	A	SNP	ENSG00000203849	ENST00000369381	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.695	-	-	-	no_errors	RP11-417J8.6	Clone_based_vega_gene	ENSG00000203849	tier1	-	-	188	0	0.00	212	34	13.82
ENSG00000203971	0	genome.wustl.edu	37	20	56534062	56534062	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	56534062	56534062	G	T	SNP	ENSG00000203971	ENST00000371169	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	RP13-379L11.2	Clone_based_vega_gene	ENSG00000203971	tier1	-	-	58	0	0.00	51	4	7.27
ENSG00000216089	0	genome.wustl.edu	37	4	160216908	160216908	+	RNA	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	160216908	160216908	C	T	SNP	ENSG00000216089	ENST00000401270	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AC105316.1	Clone_based_ensembl_gene	ENSG00000216089	tier1	rs4690935	-	37	0	0.00	23	7	23.33
ENSG00000232633	0	genome.wustl.edu	37	5	112769133	112769133	+	RNA	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	5	112769133	112769133	C	T	SNP	ENSG00000232633	ENST00000416046	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.974	-	-	-	no_errors	CTD-2201G3.1	Clone_based_vega_gene	ENSG00000232633	tier1	-	-	61	0	0.00	54	6	10.00
ENSG00000233539	0	genome.wustl.edu	37	7	46728896	46728896	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	46728896	46728896	G	T	SNP	ENSG00000233539	ENST00000469937	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	AC011294.3	Clone_based_vega_gene	ENSG00000233539	tier1	-	-	45	0	0.00	53	5	8.62
ENSG00000234978	0	genome.wustl.edu	37	1	142803954	142803954	+	RNA	SNP	A	A	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	142803954	142803954	A	G	SNP	ENSG00000234978	ENST00000423385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-423O2.5	Clone_based_vega_gene	ENSG00000234978	tier1	-	-	32	0	0.00	31	5	13.89
ENSG00000238737	0	genome.wustl.edu	37	15	23609607	23609607	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	15	23609607	23609607	G	T	SNP	ENSG00000238737	ENST00000459602	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.001	-	-	-	no_errors	AC100756.1	Clone_based_ensembl_gene	ENSG00000238737	tier1	-	-	298	0	0.00	259	67	20.55
ENSG00000242569	0	genome.wustl.edu	37	1	143361994	143361994	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	143361994	143361994	G	T	SNP	ENSG00000242569	ENST00000411775	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	RP11-435B5.3	Clone_based_vega_gene	ENSG00000242569	tier1	-	-	245	0	0.00	267	23	7.93
ENSG00000244306	0	genome.wustl.edu	37	14	19855465	19855465	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	19855465	19855465	G	T	SNP	ENSG00000244306	ENST00000551334	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306	tier1	-	-	29	0	0.00	19	6	24.00
ENSG00000255622	0	genome.wustl.edu	37	5	140537208	140537208	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	5	140537208	140537208	C	G	SNP	ENSG00000255622	ENST00000539533	human	ensembl	74_37	+1	known	missense	c.1632	p.S544R	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB17	Uniprot_gn	ENSG00000255622	tier1	-	-	275	0	0.00	297	16	5.11
ENSG00000257743	0	genome.wustl.edu	37	7	141833840	141833840	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	141833840	141833840	G	T	SNP	ENSG00000257743	ENST00000477922	human	ensembl	74_37	+1	putative	missense	c.635	p.R212L	0.893	superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,superfamily_P_trefoil,smart_P_trefoil	-	no_errors	RP11-1220K2.2	Clone_based_vega_gene	ENSG00000257743	tier1	-	-	89	0	0.00	76	6	7.32
ENSG00000258325	0	genome.wustl.edu	37	12	2921868	2921868	+	RNA	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	2921868	2921868	G	A	SNP	ENSG00000258325	ENST00000547794	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP4-816N1.6	Clone_based_vega_gene	ENSG00000258325	tier1	-	-	21	0	0.00	22	6	21.43
ENSG00000264542	0	genome.wustl.edu	37	11	106672169	106672169	+	RNA	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	106672169	106672169	C	G	SNP	ENSG00000264542	ENST00000578526	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AP001282.1	Clone_based_ensembl_gene	ENSG00000264542	tier1	-	-	35	0	0.00	51	4	7.27
ENSG00000271776	0	genome.wustl.edu	37	13	79173478	79173478	+	RNA	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	13	79173478	79173478	G	A	SNP	ENSG00000271776	ENST00000607269	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.991	-	-	-	no_errors	RP11-52L5.6	Clone_based_vega_gene	ENSG00000271776	tier1	-	-	59	0	0.00	65	6	8.45
ENSG00000272491	0	genome.wustl.edu	37	1	48694895	48694895	+	RNA	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	48694895	48694895	C	T	SNP	ENSG00000272491	ENST00000606809	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP5-1024N4.4	Clone_based_vega_gene	ENSG00000272491	tier1	-	-	46	0	0.00	48	6	11.11
ENTHD2	0	genome.wustl.edu	37	17	79205458	79205458	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	79205458	79205458	C	G	SNP	ENTHD2	ENST00000300714	human	ensembl	74_37	-1	known	missense	c.735	p.Q245H	1.000	NULL	pfam_Epsin_dom_N,superfamily_ENTH_VHS	-	no_errors	ENTHD2	HGNC	ENSG00000167302	tier1	-	-	47	0	0.00	39	11	22.00
EPHB1	0	genome.wustl.edu	37	3	134696814	134696814	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	134696814	134696814	G	C	SNP	EPHB1	ENST00000482618	human	ensembl	74_37	+1	known	missense	c.812	p.R271T	0.002	NULL	pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	-	no_errors	EPHB1	HGNC	ENSG00000154928	tier1	-	-	75	0	0.00	88	13	12.87
ERICH1	0	genome.wustl.edu	37	8	665954	665954	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	8	665954	665954	C	G	SNP	ERICH1	ENST00000262109	human	ensembl	74_37	-1	known	missense	c.76	p.G26R	0.700	NULL	NULL	-	no_errors	ERICH1	HGNC	ENSG00000104714	tier1	-	-	133	0	0.00	114	15	11.63
ERN1	0	genome.wustl.edu	37	17	62133221	62133223	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	62133221	62133223	GCT	-	DEL	ERN1	ENST00000433197	human	ensembl	74_37	-1	known	in_frame_del	c.1486_1484	p.Q495in_frame_del	0.999:0.998:0.998	NULL	pfam_Prot_kinase_dom,pfam_KEN_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Quinonprotein_ADH-like_supfam,smart_PQQ_beta_propeller_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PUG-dom,pfscan_Prot_kinase_dom	-	no_errors	ERN1	HGNC	ENSG00000178607	tier1			39	0	0.00	39	4	9.30
EYS	0	genome.wustl.edu	37	6	66205078	66205078	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	66205078	66205078	G	T	SNP	EYS	ENST00000370616	human	ensembl	74_37	-1	known	missense	c.226	p.Q76K	1.000	NULL	pfam_Laminin_G,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	EYS	HGNC	ENSG00000188107	tier1	-	-	38	0	0.00	58	8	12.12
FADS1	0	genome.wustl.edu	37	11	61570536	61570536	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	61570536	61570536	G	T	SNP	FADS1	ENST00000350997	human	ensembl	74_37	-1	known	missense	c.1296	p.F432L	1.000	pfam_Fatty_acid_desaturase-1,pirsf_Fatty_acid/sphinglp_desaturase	pfam_Fatty_acid_desaturase-1,pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pirsf_Fatty_acid/sphinglp_desaturase,pfscan_Cyt_B5-like_heme/steroid-bd,prints_Cyt_B5-like_heme/steroid-bd	-	no_errors	FADS1	HGNC	ENSG00000149485	tier1	-	-	33	0	0.00	40	5	11.11
FADS3	0	genome.wustl.edu	37	11	61645986	61645986	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	61645986	61645986	C	G	SNP	FADS3	ENST00000278829	human	ensembl	74_37	-1	known	missense	c.745	p.E249Q	0.999	pfam_Fatty_acid_desaturase-1,pirsf_Fatty_acid/sphinglp_desaturase	pfam_Fatty_acid_desaturase-1,pfam_Cyt_B5-like_heme/steroid-bd,superfamily_Cyt_B5-like_heme/steroid-bd,pirsf_Fatty_acid/sphinglp_desaturase,pfscan_Cyt_B5-like_heme/steroid-bd	-	no_errors	FADS3	HGNC	ENSG00000221968	tier1	-	-	71	0	0.00	79	7	8.14
FAM186A	0	genome.wustl.edu	37	12	50744904	50744904	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	50744904	50744904	G	C	SNP	FAM186A	ENST00000327337	human	ensembl	74_37	-1	known	missense	c.5711	p.S1904C	0.000	NULL	NULL	-	no_errors	FAM186A	HGNC	ENSG00000185958	tier1	-	-	67	0	0.00	80	9	10.11
FAM86C2P	0	genome.wustl.edu	37	11	67572775	67572775	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	67572775	67572775	C	A	SNP	FAM86C2P	ENST00000525180	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.292	-	-	-	no_errors	FAM86C2P	HGNC	ENSG00000160172	tier1	-	-	185	0	0.00	222	14	5.93
FAM90A27P	0	genome.wustl.edu	37	19	53786080	53786080	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	53786080	53786080	C	A	SNP	FAM90A27P	ENST00000599085	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FAM90A27P	HGNC	ENSG00000189348	tier1	-	-	77	0	0.00	118	15	11.19
FASN	0	genome.wustl.edu	37	17	80043514	80043514	+	Silent	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	80043514	80043514	G	A	SNP	FASN	ENST00000306749	human	ensembl	74_37	-1	known	silent	c.3966	p.L1322	0.001	pfam_Methyltransf_12,pfam_Methyltransf_11	pfam_Acyl_transferase,pfam_Ketoacyl_synth_N,pfam_Thioesterase,pfam_PKS_KR,pfam_DH_sc/Rdtase_SDR,pfam_Ketoacyl_synth_C,pfam_ADH_C,pfam_Acyl_carrier_prot-like,pfam_Methyltransf_12,pfam_Methyltransf_11,superfamily_Thiolase-like,superfamily_Acyl_Trfase/lysoPLipase,superfamily_GroES-like,superfamily_Acyl_carrier_prot-like,superfamily_Malonyl_transacylase_ACP-bd,smart_PKS_Beta-ketoAc_synthase_dom,smart_PKS_acyl_transferase,smart_PKS_dehydratase,smart_PKS_ER,smart_PKS/FAS_KR,smart_PKS_PP-bd,pfscan_Acyl_carrier_prot-like	-	no_errors	FASN	HGNC	ENSG00000169710	tier1	-	-	112	0	0.00	95	9	8.57
FASTKD3	0	genome.wustl.edu	37	5	7867439	7867439	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	5	7867439	7867439	G	T	SNP	FASTKD3	ENST00000264669	human	ensembl	74_37	-1	known	missense	c.758	p.P253Q	0.050	NULL	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTKD3	HGNC	ENSG00000124279				40	0	0.00	62	4	5.97
FBN3	0	genome.wustl.edu	37	19	8174147	8174147	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	8174147	8174147	C	G	SNP	FBN3	ENST00000270509	human	ensembl	74_37	-1	known	missense	c.4582	p.G1528R	1.000	pfam_TB_dom,superfamily_TB_dom,pirsf_FBN	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN3	HGNC	ENSG00000142449	tier1	-	-	72	0	0.00	60	12	16.67
FCGBP	0	genome.wustl.edu	37	19	40357626	40357626	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	40357626	40357626	C	A	SNP	FCGBP	ENST00000221347	human	ensembl	74_37	-1	known	missense	c.15687	p.W5229C	0.254	smart_VWC_out,smart_Fol_N,smart_VWF_type-D	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_Fol_N,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_VWF_C,smart_VWC_out	-	no_errors	FCGBP	HGNC	ENSG00000090920	tier1	-	-	41	0	0.00	47	4	7.84
FIP1L1	0	genome.wustl.edu	37	4	54319248	54319249	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	54319248	54319249	AG	0	DEL	FIP1L1	ENST00000337488	human	ensembl	74_37	+1	known	frame_shift_del	c.1447_1448	p.E486fs	0.975:0.991	NULL	pfam_Fip1	-	no_errors	FIP1L1	HGNC	ENSG00000145216				26	0	0.00	61	7	10.29
FLJ22184	0	genome.wustl.edu	37	19	7934933	7934933	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	7934933	7934933	G	T	SNP	FLJ22184	ENST00000539422	human	ensembl	74_37	-1	known	missense	c.3197	p.P1066H	0.992	NULL	NULL	-	no_errors	CTD-3193O13.9	Clone_based_vega_gene	ENSG00000183248				49	0	0.00	26	6	18.75
FN1	0	genome.wustl.edu	37	2	216249641	216249641	+	Silent	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	216249641	216249641	G	A	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	silent	c.4671	p.I1557	0.998	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				71	0	0.00	72	4	5.26
FN1	0	genome.wustl.edu	37	2	216289984	216289984	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	216289984	216289984	C	T	SNP	FN1	ENST00000354785	human	ensembl	74_37	-1	known	missense	c.869	p.R290H	0.159	NULL	pfam_Fibronectin_type3,pfam_Fibronectin_type1,pfam_FN_type2_col-bd,superfamily_Kringle-like,superfamily_Fibronectin_type3,smart_Fibronectin_type1,smart_FN_type2_col-bd,smart_Fibronectin_type3,pfscan_Fibronectin_type1,pfscan_FN_type2_col-bd,pfscan_Fibronectin_type3	-	no_errors	FN1	HGNC	ENSG00000115414				60	0	0.00	49	3	5.66
FOXN3	0	genome.wustl.edu	37	14	89629022	89629022	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	89629022	89629022	C	T	SNP	FOXN3	ENST00000261302	human	ensembl	74_37	-1	known	silent	c.1209	p.K403	0.998	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXN3	HGNC	ENSG00000053254	tier1	-	-	59	0	0.00	78	6	7.14
FREM2	0	genome.wustl.edu	37	13	39424336	39424336	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	13	39424336	39424336	C	A	SNP	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	missense	c.6541	p.P2181T	1.000	pfam_Calx_beta,smart_Calx_beta	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	tier1	-	-	35	0	0.00	44	4	8.33
FRG1	0	genome.wustl.edu	37	4	190883076	190883076	+	Silent	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	190883076	190883076	G	C	SNP	FRG1	ENST00000226798	human	ensembl	74_37	+1	known	silent	c.729	p.T243	0.258	pfam_FRG1	pfam_FRG1,pfam_Fascin-domain,superfamily_Actin_cross-linking	-	no_errors	FRG1	HGNC	ENSG00000109536				40	0	0.00	45	3	6.25
FRMD3	0	genome.wustl.edu	37	9	85958132	85958132	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	85958132	85958132	C	A	SNP	FRMD3	ENST00000304195	human	ensembl	74_37	-1	known	missense	c.445	p.A149S	1.000	pfam_FERM_central,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,pfscan_FERM_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like	-	no_errors	FRMD3	HGNC	ENSG00000172159	tier1	-	-	72	0	0.00	77	5	6.10
FRY	0	genome.wustl.edu	37	13	32812001	32812001	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	13	32812001	32812001	G	T	SNP	FRY	ENST00000380250	human	ensembl	74_37	+1	known	missense	c.6296	p.G2099V	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	FRY	HGNC	ENSG00000073910	tier1	-	-	29	0	0.00	34	4	10.53
FRYL	0	genome.wustl.edu	37	4	48622744	48622744	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	48622744	48622744	G	A	SNP	FRYL	ENST00000358350	human	ensembl	74_37	-1	known	missense	c.226	p.R76C	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	FRYL	HGNC	ENSG00000075539	tier1	-	-	77	0	0.00	90	9	9.09
FSIP2	0	genome.wustl.edu	37	2	186656428	186656428	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	186656428	186656428	C	A	SNP	FSIP2	ENST00000343098	human	ensembl	74_37	+1	known	nonsense	c.4832	p.S1611*	0.448	NULL	NULL	-	no_errors	FSIP2	HGNC	ENSG00000188738	tier1	-	-	63	0	0.00	89	5	5.32
FYB	0	genome.wustl.edu	37	5	39202128	39202128	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	5	39202128	39202128	C	A	SNP	FYB	ENST00000540520	human	ensembl	74_37	-1	known	missense	c.965	p.R322M	0.993	NULL	pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain	-	no_errors	FYB	HGNC	ENSG00000082074	tier1	-	-	102	0	0.00	115	9	7.26
GAGE10	0	genome.wustl.edu	37	X	49161383	49161383	+	Silent	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	49161383	49161383	C	G	SNP	GAGE10	ENST00000407599	human	ensembl	74_37	+1	known	silent	c.45	p.L15	0.000	pfam_GAGE	pfam_GAGE	-	no_errors	GAGE10	HGNC	ENSG00000215274	tier1	-	-	571	0	0.00	626	58	8.45
GAS2L2	0	genome.wustl.edu	37	17	34071950	34071950	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	34071950	34071950	G	T	SNP	GAS2L2	ENST00000254466	human	ensembl	74_37	-1	known	missense	c.2566	p.P856T	0.002	NULL	pfam_GAS2_dom,pfam_CH-domain,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_GAS2_dom,pfscan_CH-domain	-	no_errors	GAS2L2	HGNC	ENSG00000132139	tier1	-	-	73	0	0.00	95	7	6.86
GLP1R	0	genome.wustl.edu	37	6	39047379	39047379	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	39047379	39047379	G	T	SNP	GLP1R	ENST00000373256	human	ensembl	74_37	+1	known	silent	c.1083	p.G361	0.990	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_GLP1_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_GLP1/glucagon_rcpt,prints_GPCR_2_GIP_rcpt	-	no_errors	GLP1R	HGNC	ENSG00000112164	tier1	-	-	60	0	0.00	86	6	6.52
GNA15	0	genome.wustl.edu	37	19	3157847	3157847	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	3157847	3157847	C	T	SNP	GNA15	ENST00000262958	human	ensembl	74_37	+1	known	missense	c.866	p.S289F	0.997	pfam_Gprotein_alpha_su,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su,prints_Gprotein_alpha_Q	-	no_errors	GNA15	HGNC	ENSG00000060558	tier1	-	-	127	0	0.00	175	10	5.41
GNLY	0	genome.wustl.edu	37	2	85922542	85922542	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	85922542	85922542	C	A	SNP	GNLY	ENST00000263863	human	ensembl	74_37	+1	known	missense	c.152	p.P51H	0.000	NULL	pfam_SapB_2,superfamily_Saposin-like,smart_SaposinB,pfscan_SaposinB	-	no_errors	GNLY	HGNC	ENSG00000115523	tier1	-	-	62	0	0.00	74	7	8.64
GP6	0	genome.wustl.edu	37	19	55526303	55526303	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	55526303	55526303	C	A	SNP	GP6	ENST00000310373	human	ensembl	74_37	-1	known	missense	c.1010	p.R337L	0.000	NULL	smart_Ig_sub,smart_Ig_sub2	-	no_errors	GP6	HGNC	ENSG00000088053	tier1	-	-	62	0	0.00	74	7	8.64
GPR78	0	genome.wustl.edu	37	4	8583004	8583004	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	8583004	8583004	G	T	SNP	GPR78	ENST00000382487	human	ensembl	74_37	+1	known	missense	c.295	p.A99S	0.998	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR78	HGNC	ENSG00000155269				14	0	0.00	25	3	10.71
GPR97	0	genome.wustl.edu	37	16	57717928	57717928	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	57717928	57717928	C	A	SNP	GPR97	ENST00000333493	human	ensembl	74_37	+1	known	silent	c.966	p.A322	0.006	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPS_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2-like,prints_GPCR_2_secretin-like,prints_GPCR_2_orphan_rcpt_GPR56	-	no_errors	GPR97	HGNC	ENSG00000182885	tier1	-	-	81	0	0.00	86	6	6.38
GPRC5B	0	genome.wustl.edu	37	16	19873269	19873269	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	19873269	19873269	C	A	SNP	GPRC5B	ENST00000537135	human	ensembl	74_37	-1	known	missense	c.1135	p.G379C	1.000	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C	-	no_errors	GPRC5B	HGNC	ENSG00000167191	tier1	-	-	55	0	0.00	29	5	14.71
GRAMD1C	0	genome.wustl.edu	37	3	113627935	113627935	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	113627935	113627935	A	G	SNP	GRAMD1C	ENST00000358160	human	ensembl	74_37	+1	known	missense	c.920	p.D307G	0.987	NULL	pfam_GRAM,smart_GRAM	-	no_errors	GRAMD1C	HGNC	ENSG00000178075	tier1	-	-	58	0	0.00	102	6	5.56
GRIFIN	0	genome.wustl.edu	37	7	2515604	2515604	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	2515604	2515604	G	T	SNP	GRIFIN	ENST00000417742	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GRIFIN	HGNC	ENSG00000236734	tier1	-	-	49	0	0.00	68	7	9.33
GRINA	0	genome.wustl.edu	37	8	145066491	145066491	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	8	145066491	145066491	G	T	SNP	GRINA	ENST00000313269	human	ensembl	74_37	+1	known	missense	c.772	p.V258L	0.996	pfam_Bax_inhibitor_1-related	pfam_Bax_inhibitor_1-related	-	no_errors	GRINA	HGNC	ENSG00000178719	tier1	-	-	40	0	0.00	45	8	15.09
GRM4	0	genome.wustl.edu	37	6	34122888	34122888	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	34122888	34122888	G	T	SNP	GRM4	ENST00000374177	human	ensembl	74_37	-1	known	missense	c.280	p.R94S	0.121	NULL	pfam_GPCR_3_C,pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_4,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM4	HGNC	ENSG00000124493	tier1	-	-	121	0	0.00	149	11	6.88
GTF2IRD1	0	genome.wustl.edu	37	7	73932624	73932624	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	73932624	73932624	A	T	SNP	GTF2IRD1	ENST00000265755	human	ensembl	74_37	+1	known	missense	c.577	p.S193C	1.000	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	-	no_errors	GTF2IRD1	HGNC	ENSG00000006704				21	0	0.00	28	4	12.50
GUCA1A	0	genome.wustl.edu	37	6	42141452	42141452	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	42141452	42141452	T	C	SNP	GUCA1A	ENST00000053469	human	ensembl	74_37	+1	known	missense	c.101	p.L34P	1.000	NULL	pfam_EF_hand_dom,pfam_SPARC/Testican_Ca-bd-dom,smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	GUCA1A	HGNC	ENSG00000048545				62	0	0.00	65	4	5.80
H2AFV	0	genome.wustl.edu	37	7	44882898	44882898	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	44882898	44882898	C	A	SNP	H2AFV	ENST00000308153	human	ensembl	74_37	-1	known	missense	c.59	p.R20L	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	H2AFV	HGNC	ENSG00000105968	tier1	-	-	73	0	0.00	80	8	9.09
HAP1	0	genome.wustl.edu	37	17	39883692	39883692	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	39883692	39883692	C	A	SNP	HAP1	ENST00000310778	human	ensembl	74_37	-1	known	missense	c.1289	p.G430V	0.566	pfam_HAP1_N	pfam_HAP1_N	-	no_errors	HAP1	HGNC	ENSG00000173805	tier1	-	-	105	0	0.00	115	9	7.26
HDAC4	0	genome.wustl.edu	37	2	240002840	240002840	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	240002840	240002840	C	A	SNP	HDAC4	ENST00000345617	human	ensembl	74_37	-1	known	missense	c.2686	p.G896C	1.000	pfam_His_deacetylse_dom,pirsf_Histone_deAcase_II_euk	pfam_His_deacetylse_dom,pfam_Hist_deacetylase_Gln_rich_N,pfam_Arb2_domain,pirsf_Histone_deAcase_II_euk,prints_His_deacetylse	-	no_errors	HDAC4	HGNC	ENSG00000068024	tier1	-	-	100	0	0.00	113	13	10.32
HDLBP	0	genome.wustl.edu	37	2	242195807	242195807	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	242195807	242195807	C	T	SNP	HDLBP	ENST00000310931	human	ensembl	74_37	-1	known	missense	c.665	p.R222H	1.000	smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	HDLBP	HGNC	ENSG00000115677	tier1	-	-	48	0	0.00	60	8	11.76
HECTD4	0	genome.wustl.edu	37	12	112673449	112673449	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	112673449	112673449	C	T	SNP	HECTD4	ENST00000377560	human	ensembl	74_37	-1	known	missense	c.5068	p.V1690I	1.000	NULL	pfam_HECT,superfamily_HECT,superfamily_ConA-like_lec_gl_sf,smart_HECT,pfscan_HECT	-	no_errors	HECTD4	HGNC	ENSG00000173064	tier1	-	-	61	0	0.00	61	4	6.06
HERC2P3	0	genome.wustl.edu	37	15	20644851	20644851	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	15	20644851	20644851	C	A	SNP	HERC2P3	ENST00000426501	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HERC2P3	HGNC	ENSG00000180229	tier1	-	-	326	0	0.00	343	43	11.14
HIP1R	0	genome.wustl.edu	37	12	123344997	123344997	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	123344997	123344997	G	A	SNP	HIP1R	ENST00000253083	human	ensembl	74_37	+1	known	missense	c.2587	p.A863T	1.000	pfam_ILWEQ_dom,smart_ILWEQ_dom,pfscan_ILWEQ_dom	pfam_ANTH_dom,pfam_ILWEQ_dom,pfam_Epsin_dom_N,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_ILWEQ_dom,pfscan_Epsin-like_N,pfscan_ILWEQ_dom	-	no_errors	HIP1R	HGNC	ENSG00000130787	tier1	-	-	53	0	0.00	46	4	8.00
HIST2H2AC	0	genome.wustl.edu	37	1	149858798	149858798	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	149858798	149858798	G	A	SNP	HIST2H2AC	ENST00000331380	human	ensembl	74_37	+1	known	missense	c.274	p.E92K	1.000	superfamily_Histone-fold,smart_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST2H2AC	HGNC	ENSG00000184260	tier1	-	-	159	0	0.00	181	16	8.04
HKDC1	0	genome.wustl.edu	37	10	71008284	71008284	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	71008284	71008284	C	A	SNP	HKDC1	ENST00000354624	human	ensembl	74_37	+1	known	missense	c.1370	p.T457N	1.000	pfam_Hexokinase_C	pfam_Hexokinase_C,pfam_Hexokinase_N,prints_Hexokinase	-	no_errors	HKDC1	HGNC	ENSG00000156510	tier1	-	-	57	0	0.00	62	8	11.43
HLA-DMA	0	genome.wustl.edu	37	6	32917464	32917464	+	Silent	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	32917464	32917464	G	A	SNP	HLA-DMA	ENST00000374843	human	ensembl	74_37	-1	known	silent	c.576	p.F192	1.000	pfam_Ig_C1-set,smart_Ig_C1-set,pfscan_Ig-like_dom	pfam_MHC_II_a_N,pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_MHC_II_a_N,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	HLA-DMA	HGNC	ENSG00000204257	tier1	-	-	39	0	0.00	79	9	10.23
HSD3B2	0	genome.wustl.edu	37	1	119964835	119964835	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	119964835	119964835	G	T	SNP	HSD3B2	ENST00000369416	human	ensembl	74_37	+1	known	missense	c.711	p.R237S	0.894	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_dTDP_dehydrorham_reduct	pfam_3Beta_OHSteriod_DH/Estase,pfam_Epimerase_deHydtase,pfam_Male_sterile_NAD-bd,pfam_Polysac_CapD-like,pfam_DH_sc/Rdtase_SDR,pfam_dTDP_dehydrorham_reduct,pfam_NmrA,pfam_PKS_KR	-	no_errors	HSD3B2	HGNC	ENSG00000203859	tier1	-	-	85	0	0.00	91	14	13.21
HSPB7	0	genome.wustl.edu	37	1	16344400	16344400	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	16344400	16344400	G	A	SNP	HSPB7	ENST00000487046	human	ensembl	74_37	-1	known	missense	c.59	p.S20F	0.317	NULL	pfam_a-crystallin/Hsp20_dom,superfamily_HSP20-like_chaperone,pfscan_a-crystallin/Hsp20_dom,prints_Alpha-crystallin/HSP	-	no_errors	HSPB7	HGNC	ENSG00000173641	tier1	-	-	52	0	0.00	55	5	8.33
HTR3C	0	genome.wustl.edu	37	3	183777335	183777335	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	183777335	183777335	C	A	SNP	HTR3C	ENST00000318351	human	ensembl	74_37	+1	known	missense	c.832	p.R278S	0.002	pfam_Neurotrans-gated_channel_TM,superfamily_Neurotrans-gated_channel_TM	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_Neur_channel	-	no_errors	HTR3C	HGNC	ENSG00000178084	tier1	-	-	80	0	0.00	109	7	6.03
HYDIN	0	genome.wustl.edu	37	16	71101239	71101239	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	71101239	71101239	C	A	SNP	HYDIN	ENST00000448089	human	ensembl	74_37	-1	known	missense	c.2029	p.V677L	0.998	NULL	superfamily_PapD-like	-	no_errors	HYDIN	HGNC	ENSG00000157423	tier1	-	-	91	0	0.00	109	10	8.26
HYKK	0	genome.wustl.edu	37	15	78805449	78805449	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	15	78805449	78805449	C	T	SNP	HYKK	ENST00000388988	human	ensembl	74_37	+1	known	nonsense	c.19	p.Q7*	0.000	NULL	pfam_Aminoglycoside_PTrfase,superfamily_Kinase-like_dom	-	no_errors	HYKK	HGNC	ENSG00000188266				40	0	0.00	44	4	8.33
IBTK	0	genome.wustl.edu	37	6	82924380	82924380	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	82924380	82924380	G	C	SNP	IBTK	ENST00000306270	human	ensembl	74_37	-1	known	missense	c.1768	p.Q590E	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_Reg_chr_condens,pfam_BTB_POZ,pfam_Ankyrin_rpt,superfamily_RCC1/BLIP-II,superfamily_BTB/POZ_fold,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_BTB/POZ-like,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like,pfscan_Reg_chr_condens	-	no_errors	IBTK	HGNC	ENSG00000005700				37	0	0.00	51	3	5.56
IFT52	0	genome.wustl.edu	37	20	42242550	42242550	+	Silent	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	42242550	42242550	G	C	SNP	IFT52	ENST00000373030	human	ensembl	74_37	+1	known	silent	c.546	p.A182	0.998	NULL	pfam_ABC_transp_unknown	-	no_errors	IFT52	HGNC	ENSG00000101052	tier1	-	-	124	0	0.00	160	10	5.88
IFT81	0	genome.wustl.edu	37	12	110628806	110628806	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	110628806	110628806	G	A	SNP	IFT81	ENST00000242591	human	ensembl	74_37	+1	known	missense	c.1420	p.E474K	1.000	NULL	NULL	-	no_errors	IFT81	HGNC	ENSG00000122970	tier1	-	-	67	0	0.00	97	10	9.35
IL10	0	genome.wustl.edu	37	1	206945647	206945647	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	206945647	206945647	C	A	SNP	IL10	ENST00000423557	human	ensembl	74_37	-1	known	missense	c.134	p.R45L	0.980	pfam_IL-10/19/20/24/26_fam,superfamily_4_helix_cytokine-like_core,smart_IL-10/19/20/24/26_fam,prints_IL-10	pfam_IL-10/19/20/24/26_fam,superfamily_4_helix_cytokine-like_core,smart_IL-10/19/20/24/26_fam,prints_IL-10	-	no_errors	IL10	HGNC	ENSG00000136634	tier1	-	-	51	0	0.00	58	9	13.43
INPP4B	0	genome.wustl.edu	37	4	143003189	143003189	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	143003189	143003189	C	A	SNP	INPP4B	ENST00000509777	human	ensembl	74_37	-1	known	missense	c.2637	p.M879I	1.000	NULL	superfamily_C2_dom	-	no_errors	INPP4B	HGNC	ENSG00000109452				35	0	0.00	32	2	5.88
INSRR	0	genome.wustl.edu	37	1	156815775	156815775	+	Silent	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	156815775	156815775	G	C	SNP	INSRR	ENST00000368195	human	ensembl	74_37	-1	known	silent	c.1947	p.G649	0.985	pirsf_Tyr_kinase_insulin-like_rcpt,superfamily_Fibronectin_type3,smart_Fibronectin_type3	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	INSRR	HGNC	ENSG00000027644	tier1	-	-	60	0	0.00	73	11	13.10
IQCJ-SCHIP1	0	genome.wustl.edu	37	3	159606731	159606731	+	Silent	SNP	A	A	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	159606731	159606731	A	G	SNP	IQCJ-SCHIP1	ENST00000485419	human	ensembl	74_37	+1	known	silent	c.1545	p.E515	1.000	pfam_SCHIP_1	pfam_SCHIP_1	-	no_errors	IQCJ-SCHIP1	HGNC	ENSG00000250588	tier1	-	-	82	0	0.00	69	4	5.48
ITGA10	0	genome.wustl.edu	37	1	145533913	145533913	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	145533913	145533913	G	T	SNP	ITGA10	ENST00000369304	human	ensembl	74_37	+1	known	missense	c.1559	p.G520V	0.999	smart_Int_alpha_beta-p	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA10	HGNC	ENSG00000143127	tier1	-	-	84	0	0.00	82	9	9.89
ITGA2B	0	genome.wustl.edu	37	17	42461461	42461461	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	42461461	42461461	C	T	SNP	ITGA2B	ENST00000262407	human	ensembl	74_37	-1	known	missense	c.937	p.G313R	0.992	prints_Integrin_alpha	pfam_Integrin_alpha-2,pfam_FG-GAP,pfam_Integrin_alpha_C_CS,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA2B	HGNC	ENSG00000005961	tier1	-	-	63	0	0.00	68	8	10.39
ITGA3	0	genome.wustl.edu	37	17	48151811	48151811	+	Splice_Site	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	48151811	48151811	G	T	SNP	ITGA3	ENST00000320031	human	ensembl	74_37	+1	known	splice_site	c.1383-1	e10-1	1.000	-	-	-	no_errors	ITGA3	HGNC	ENSG00000005884	tier1	-	-	32	0	0.00	22	7	24.14
ITGB4	0	genome.wustl.edu	37	17	73747158	73747158	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	73747158	73747158	C	T	SNP	ITGB4	ENST00000200181	human	ensembl	74_37	+1	known	silent	c.3759	p.Y1253	0.109	pirsf_Integrin_bsu-4,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pirsf_Integrin_bsu-4,pfam_Integrin_bsu_N,pfam_Fibronectin_type3,pfam_Calx_beta,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Fibronectin_type3,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,smart_Calx_beta,smart_Fibronectin_type3,prints_Integrin_bsu,pfscan_Fibronectin_type3	-	no_errors	ITGB4	HGNC	ENSG00000132470	tier1	-	-	38	0	0.00	31	4	11.43
ITPR2	0	genome.wustl.edu	37	12	26572079	26572079	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	26572079	26572079	C	G	SNP	ITPR2	ENST00000381340	human	ensembl	74_37	-1	known	missense	c.7013	p.R2338P	1.000	pfam_Ion_trans_dom	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR2	HGNC	ENSG00000123104	tier1	-	-	55	0	0.00	63	5	7.35
JAKMIP2	0	genome.wustl.edu	37	5	147040585	147040585	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	5	147040585	147040585	G	T	SNP	JAKMIP2	ENST00000265272	human	ensembl	74_37	-1	known	silent	c.553	p.R185	0.687	NULL	NULL	-	no_errors	JAKMIP2	HGNC	ENSG00000176049	tier1	-	-	44	0	0.00	56	4	6.67
KANSL1	0	genome.wustl.edu	37	17	44144914	44144914	+	Splice_Site	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	44144914	44144914	C	A	SNP	KANSL1	ENST00000262419	human	ensembl	74_37	-1	known	splice_site	c.1652+1	e4+1	1.000	-	-	-	no_errors	KANSL1	HGNC	ENSG00000120071	tier1	-	-	49	0	0.00	73	14	16.09
KATNBL1	0	genome.wustl.edu	37	15	34439631	34439631	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	15	34439631	34439631	C	A	SNP	KATNBL1	ENST00000256544	human	ensembl	74_37	-1	known	missense	c.558	p.R186S	1.000	NULL	NULL	-	no_errors	KATNBL1	HGNC	ENSG00000134152	tier1	-	-	44	0	0.00	65	5	7.14
KBTBD6	0	genome.wustl.edu	37	13	41706476	41706476	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	13	41706476	41706476	C	T	SNP	KBTBD6	ENST00000379485	human	ensembl	74_37	-1	known	missense	c.172	p.D58N	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold	pfam_BTB_POZ,pfam_BACK,pfam_Kelch_1,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KBTBD6	HGNC	ENSG00000165572	tier1	-	-	60	0	0.00	87	12	12.12
KDELR2	0	genome.wustl.edu	37	7	6505755	6505755	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	6505755	6505755	C	G	SNP	KDELR2	ENST00000258739	human	ensembl	74_37	-1	known	missense	c.551	p.G184A	1.000	prints_ER_ret_rcpt	pfam_ER_ret_rcpt,prints_ER_ret_rcpt	-	no_errors	KDELR2	HGNC	ENSG00000136240				86	0	0.00	71	4	5.33
KDM4C	0	genome.wustl.edu	37	9	6793022	6793022	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	6793022	6793022	C	T	SNP	KDM4C	ENST00000381309	human	ensembl	74_37	+1	known	missense	c.34	p.P12S	1.000	NULL	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,superfamily_Chorismate_mutase_type_II,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4C	HGNC	ENSG00000107077	tier1	-	-	86	0	0.00	87	5	5.43
KHDRBS2	0	genome.wustl.edu	37	6	62390931	62390931	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	62390931	62390931	C	A	SNP	KHDRBS2	ENST00000281156	human	ensembl	74_37	-1	known	missense	c.987	p.L329F	1.000	NULL	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	KHDRBS2	HGNC	ENSG00000112232	tier1	-	-	53	0	0.00	72	5	6.49
KIAA1211L	0	genome.wustl.edu	37	2	99454683	99454683	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	99454683	99454683	C	A	SNP	KIAA1211L	ENST00000397899	human	ensembl	74_37	-1	known	silent	c.138	p.P46	0.000	NULL	NULL	-	no_errors	KIAA1211L	HGNC	ENSG00000196872	tier1	-	-	83	0	0.00	97	18	15.65
KIAA1467	0	genome.wustl.edu	37	12	13232915	13232915	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	13232915	13232915	G	C	SNP	KIAA1467	ENST00000197268	human	ensembl	74_37	+1	known	missense	c.1835	p.R612T	1.000	NULL	superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	KIAA1467	HGNC	ENSG00000084444	tier1	-	-	82	0	0.00	99	7	6.60
KIF1B	0	genome.wustl.edu	37	1	10292396	10292396	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	10292396	10292396	G	T	SNP	KIF1B	ENST00000263934	human	ensembl	74_37	+1	known	missense	c.10	p.A4S	1.000	superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523	tier1	-	-	35	0	0.00	51	4	7.27
KIT	0	genome.wustl.edu	37	4	55604640	55604640	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	55604640	55604640	G	T	SNP	KIT	ENST00000288135	human	ensembl	74_37	+1	known	missense	c.2848	p.V950L	0.001	pirsf_Tyr_kinase_CSF1/PDGF_rcpt	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	KIT	HGNC	ENSG00000157404	tier1	-	-	67	0	0.00	81	9	10.00
KLHL2	0	genome.wustl.edu	37	4	166149971	166149971	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	166149971	166149971	G	T	SNP	KLHL2	ENST00000226725	human	ensembl	74_37	+1	known	silent	c.165	p.L55	0.999	pfam_BTB_POZ,superfamily_BTB/POZ_fold,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL2	HGNC	ENSG00000109466	tier1	-	-	225	0	0.00	246	21	7.84
KMT2C	0	genome.wustl.edu	37	7	151878492	151878492	+	Silent	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	151878492	151878492	T	A	SNP	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	silent	c.6453	p.T2151	0.517	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609				35	0	0.00	29	4	12.12
KMT2D	0	genome.wustl.edu	37	12	49443837	49443837	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	49443837	49443837	C	A	SNP	KMT2D	ENST00000301067	human	ensembl	74_37	-1	known	missense	c.3534	p.Q1178H	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2D	HGNC	ENSG00000167548				50	0	0.00	67	4	5.63
KPNA2	0	genome.wustl.edu	37	17	66040117	66040117	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	66040117	66040117	G	T	SNP	KPNA2	ENST00000330459	human	ensembl	74_37	+1	known	missense	c.1094	p.G365V	1.000	superfamily_ARM-type_fold,pfscan_Armadillo	pfam_Armadillo,pfam_Importin-a_IBB,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,pfscan_Importin-a_IBB	-	no_errors	KPNA2	HGNC	ENSG00000182481	tier1	-	-	112	0	0.00	131	23	14.84
KRBA1	0	genome.wustl.edu	37	7	149425722	149425722	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	149425722	149425722	G	C	SNP	KRBA1	ENST00000255992	human	ensembl	74_37	+1	known	missense	c.1583	p.G528A	0.001	NULL	NULL	-	no_errors	KRBA1	HGNC	ENSG00000133619	tier1	-	-	50	0	0.00	59	5	7.81
KRT33B	0	genome.wustl.edu	37	17	39521128	39521128	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	39521128	39521128	G	C	SNP	KRT33B	ENST00000251646	human	ensembl	74_37	-1	known	missense	c.1000	p.R334G	1.000	pfam_IF	pfam_IF,prints_Keratin_I	-	no_errors	KRT33B	HGNC	ENSG00000131738	tier1	-	-	104	0	0.00	117	29	19.86
KRT6C	0	genome.wustl.edu	37	12	52867433	52867433	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	52867433	52867433	C	G	SNP	KRT6C	ENST00000252250	human	ensembl	74_37	-1	known	missense	c.89	p.R30P	0.999	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6C	HGNC	ENSG00000170465	tier1	-	-	128	0	0.00	139	10	6.67
KRT76	0	genome.wustl.edu	37	12	53165004	53165004	+	Splice_Site	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	53165004	53165004	C	A	SNP	KRT76	ENST00000332411	human	ensembl	74_37	-1	known	splice_site	c.1264-1	e7-1	1.000	-	-	-	no_errors	KRT76	HGNC	ENSG00000185069	tier1	-	-	59	0	0.00	68	8	10.53
LAIR1	0	genome.wustl.edu	37	19	54872553	54872553	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	54872553	54872553	G	T	SNP	LAIR1	ENST00000391742	human	ensembl	74_37	-1	known	missense	c.334	p.Q112K	0.001	smart_Ig_sub	smart_Ig_sub	-	no_errors	LAIR1	HGNC	ENSG00000167613	tier1	-	-	59	0	0.00	56	7	11.11
LAMB2	0	genome.wustl.edu	37	3	49161855	49161855	+	Silent	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	49161855	49161855	G	A	SNP	LAMB2	ENST00000305544	human	ensembl	74_37	-1	known	silent	c.3300	p.S1100	0.997	pfam_EGF_laminin,smart_EG-like_dom,smart_EGF_laminin,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_N,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB2	HGNC	ENSG00000172037	tier1	-	-	50	0	0.00	48	4	7.69
LAMB4	0	genome.wustl.edu	37	7	107688467	107688467	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	107688467	107688467	C	G	SNP	LAMB4	ENST00000205386	human	ensembl	74_37	-1	known	missense	c.4212	p.R1404S	0.892	NULL	pfam_EGF_laminin,pfam_Laminin_N,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,pfscan_Laminin_IV,pfscan_EGF_laminin,pfscan_Laminin_N	-	no_errors	LAMB4	HGNC	ENSG00000091128	tier1	-	-	107	0	0.00	118	8	6.35
LARP7	0	genome.wustl.edu	37	4	113568845	113568845	+	Splice_Site	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	113568845	113568845	G	C	SNP	LARP7	ENST00000324052	human	ensembl	74_37	+1	known	splice_site	c.998-1	e7-1	0.550	-	-	-	no_errors	LARP7	HGNC	ENSG00000174720	tier1	-	-	75	0	0.00	110	20	15.38
LARS	0	genome.wustl.edu	37	5	145543902	145543902	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	5	145543902	145543902	T	C	SNP	LARS	ENST00000394434	human	ensembl	74_37	-1	known	missense	c.565	p.I189V	0.987	pfam_aa-tRNA-synth_Ia,tigrfam_Leu-tRNA-synth_Ia_arc/euk	pfam_aa-tRNA-synth_Ia,pfam_Methionyl/Leucyl_tRNA_Synth,pfam_V/L/I-tRNA-synth_anticodon-bd,pfam_Cys-tRNA/MSH_ligase,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Val/Leu/Ile-tRNA-synth_edit,tigrfam_Leu-tRNA-synth_Ia_arc/euk	-	no_errors	LARS	HGNC	ENSG00000133706	tier1	rs199808937	-	100	0	0.00	119	7	5.56
LAX1	0	genome.wustl.edu	37	1	203743063	203743063	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	203743063	203743063	G	C	SNP	LAX1	ENST00000442561	human	ensembl	74_37	+1	known	missense	c.451	p.A151P	0.000	NULL	NULL	-	no_errors	LAX1	HGNC	ENSG00000122188	tier1	-	-	28	0	0.00	35	11	23.91
LCA5L	0	genome.wustl.edu	37	21	40777894	40777894	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	21	40777894	40777894	G	T	SNP	LCA5L	ENST00000288350	human	ensembl	74_37	-1	known	missense	c.1927	p.H643N	0.517	NULL	NULL	-	no_errors	LCA5L	HGNC	ENSG00000157578	tier1	-	-	128	0	0.00	127	9	6.62
LCE2C	0	genome.wustl.edu	37	1	152648660	152648660	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	152648660	152648660	G	A	SNP	LCE2C	ENST00000368783	human	ensembl	74_37	+1	known	missense	c.169	p.G57S	0.062	NULL	NULL	-	no_errors	LCE2C	HGNC	ENSG00000187180	tier1	-	-	158	0	0.00	177	30	14.35
LDB3	0	genome.wustl.edu	37	10	88466294	88466294	+	Silent	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	88466294	88466294	T	A	SNP	LDB3	ENST00000361373	human	ensembl	74_37	+1	known	silent	c.903	p.P301	0.989	NULL	pfam_Znf_LIM,pfam_PDZ,superfamily_PDZ,smart_PDZ,smart_ZASP,smart_Znf_LIM,pfscan_Znf_LIM,pfscan_PDZ	-	no_errors	LDB3	HGNC	ENSG00000122367	tier1	-	-	98	0	0.00	148	8	5.13
LEMD2	0	genome.wustl.edu	37	6	33752154	33752154	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	33752154	33752154	G	T	SNP	LEMD2	ENST00000293760	human	ensembl	74_37	-1	known	silent	c.828	p.L276	0.007	pfam_Inner-Nucl-membr_MAN1	pfam_Inner-Nucl-membr_MAN1,pfam_LEM_dom,superfamily_LEM/LEM-like_dom,smart_LEM_dom,pfscan_LEM_dom	-	no_errors	LEMD2	HGNC	ENSG00000161904	tier1	-	-	77	0	0.00	70	4	5.41
LENG8	0	genome.wustl.edu	37	19	54965711	54965711	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	54965711	54965711	C	T	SNP	LENG8	ENST00000326764	human	ensembl	74_37	+1	known	missense	c.529	p.H177Y	0.011	NULL	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	-	no_errors	LENG8	HGNC	ENSG00000167615	tier1	-	-	142	0	0.00	131	13	9.03
LILRA6	0	genome.wustl.edu	37	19	54744789	54744789	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	54744789	54744789	C	A	SNP	LILRA6	ENST00000419410	human	ensembl	74_37	-1	known	silent	c.873	p.G291	0.068	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LILRA6	HGNC	ENSG00000244482	tier1	-	-	264	0	0.00	261	14	5.09
LIN37	0	genome.wustl.edu	37	19	36243135	36243135	+	Silent	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	36243135	36243135	G	A	SNP	LIN37	ENST00000301159	human	ensembl	74_37	+1	known	silent	c.93	p.E31	1.000	NULL	NULL	-	no_errors	LIN37	HGNC	ENSG00000267796	tier1	-	-	42	0	0.00	45	4	8.16
LINC00674	0	genome.wustl.edu	37	17	66110635	66110635	+	RNA	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	66110635	66110635	G	A	SNP	LINC00674	ENST00000435469	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LINC00674	HGNC	ENSG00000237854	tier1	-	-	103	0	0.00	106	15	12.40
LMBRD1	0	genome.wustl.edu	37	6	70447905	70447905	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	70447905	70447905	C	A	SNP	LMBRD1	ENST00000370577	human	ensembl	74_37	-1	known	missense	c.565	p.G189C	1.000	pfam_LMBR1-like_membr_prot	pfam_LMBR1-like_membr_prot	-	no_errors	LMBRD1	HGNC	ENSG00000168216				53	0	0.00	49	3	5.77
LMO4	0	genome.wustl.edu	37	1	87805312	87805312	+	Silent	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	87805312	87805312	T	A	SNP	LMO4	ENST00000370542	human	ensembl	74_37	+1	known	silent	c.330	p.L110	0.990	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	LMO4	HGNC	ENSG00000143013	tier1	-	-	60	0	0.00	62	5	7.46
LOC100128164	0	genome.wustl.edu	37	3	169663272	169663272	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	169663272	169663272	C	A	SNP	LOC100128164	ENST00000483289	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	RP11-379K17.4	Clone_based_vega_gene	ENSG00000239219	tier1	-	-	10	0	0.00	4	4	50.00
LOC100506060	0	genome.wustl.edu	37	16	70267411	70267411	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	70267411	70267411	C	A	SNP	LOC100506060	ENST00000568855	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-296I10.6	Clone_based_vega_gene	ENSG00000261556	tier1	-	-	242	0	0.00	234	23	8.91
LOC101927188	0	genome.wustl.edu	37	18	6955526	6955526	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	18	6955526	6955526	C	A	SNP	LOC101927188	ENST00000584722	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-781P6.1	Clone_based_vega_gene	ENSG00000265069	tier1	-	-	29	0	0.00	39	6	13.33
LOC101929124	0	genome.wustl.edu	37	19	22706396	22706396	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	22706396	22706396	G	T	SNP	LOC101929124	ENST00000562262	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CTC-457E21.1	Clone_based_vega_gene	ENSG00000260599	tier1	-	-	114	0	0.00	112	11	8.94
LONP2	0	genome.wustl.edu	37	16	48385645	48385645	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	48385645	48385645	C	T	SNP	LONP2	ENST00000285737	human	ensembl	74_37	+1	known	missense	c.2491	p.L831F	1.000	pfam_Pept_S16_C,superfamily_Ribosomal_S5_D2-typ_fold,tigrfam_Lon_bac/euk-typ	pfam_Pept_S16_C,pfam_Pept_S16_N,pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_P-loop_NTPase,superfamily_PUA-like_domain,smart_Pept_S16_N,smart_AAA+_ATPase,tigrfam_Lon_bac/euk-typ	-	no_errors	LONP2	HGNC	ENSG00000102910	tier1	-	-	54	0	0.00	67	6	8.22
LPPR3	0	genome.wustl.edu	37	19	815235	815235	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	815235	815235	G	T	SNP	LPPR3	ENST00000359894	human	ensembl	74_37	-1	known	silent	c.354	p.A118	0.079	superfamily_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	LPPR3	Uniprot_gn	ENSG00000129951	tier1	-	-	22	0	0.00	15	4	21.05
LRP1	0	genome.wustl.edu	37	12	57592327	57592327	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	57592327	57592327	G	T	SNP	LRP1	ENST00000243077	human	ensembl	74_37	+1	known	missense	c.9550	p.V3184L	0.977	pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,smart_LDLR_classB_rpt,pfscan_LDLR_classB_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1	HGNC	ENSG00000123384				45	0	0.00	34	2	5.56
LRP1B	0	genome.wustl.edu	37	2	141128402	141128402	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	141128402	141128402	C	A	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.10885	p.V3629L	1.000	superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	60	0	0.00	94	9	8.74
LRRC63	0	genome.wustl.edu	37	13	46844599	46844599	+	Splice_Site	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	13	46844599	46844599	G	T	SNP	LRRC63	ENST00000446175	human	ensembl	74_37	+1	known	splice_site	c.1589-1	e10-1	0.871	-	-	-	no_errors	LRRC63	HGNC	ENSG00000173988				12	0	0.00	27	4	12.50
LRRC9	0	genome.wustl.edu	37	14	60411431	60411431	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	60411431	60411431	G	A	SNP	LRRC9	ENST00000254271	human	ensembl	74_37	+1	known	missense	c.851	p.R284Q	0.959	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRC9	HGNC	ENSG00000131951	tier1	-	-	65	0	0.00	75	6	7.41
LRRFIP1	0	genome.wustl.edu	37	2	238688092	238688092	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	238688092	238688092	G	C	SNP	LRRFIP1	ENST00000308482	human	ensembl	74_37	+1	putative	missense	c.1840	p.E614Q	1.000	NULL	pfam_Leu-rich_rep_flightless-int_pr,superfamily_Prefoldin	-	no_errors	LRRFIP1	HGNC	ENSG00000124831	tier1	-	-	71	0	0.00	77	8	9.41
LRRTM1	0	genome.wustl.edu	37	2	80529474	80529474	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	80529474	80529474	C	T	SNP	LRRTM1	ENST00000295057	human	ensembl	74_37	-1	known	missense	c.1471	p.D491N	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	-	no_errors	LRRTM1	HGNC	ENSG00000162951	tier1	-	-	79	0	0.00	80	6	6.90
LTBP1	0	genome.wustl.edu	37	2	33585729	33585729	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	33585729	33585729	G	C	SNP	LTBP1	ENST00000354476	human	ensembl	74_37	+1	known	missense	c.4069	p.A1357P	1.000	superfamily_TB_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP1	HGNC	ENSG00000049323	tier1	-	-	54	0	0.00	63	10	13.70
MACF1	0	genome.wustl.edu	37	1	39823254	39823254	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	39823254	39823254	G	A	SNP	MACF1	ENST00000317713	human	ensembl	74_37	+1	known	missense	c.5446	p.E1816K	1.000	pfam_Spectrin_repeat	pfam_Spectrin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	MACF1	HGNC	ENSG00000127603	tier1	-	-	61	0	0.00	97	7	6.73
MAGI2	0	genome.wustl.edu	37	7	77764503	77764503	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	77764503	77764503	G	T	SNP	MAGI2	ENST00000354212	human	ensembl	74_37	-1	known	missense	c.2866	p.R956S	1.000	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_PDZ,pfam_WW_dom,pfam_GK/Ca_channel_bsu,superfamily_PDZ,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_PDZ,smart_GK/Ca_channel_bsu,smart_WW_dom,pfscan_PDZ,pfscan_WW_dom,pfscan_Guanylate_kin-like	-	no_errors	MAGI2	HGNC	ENSG00000187391	tier1	-	-	61	0	0.00	67	12	15.19
MALAT1	0	genome.wustl.edu	37	11	65266504	65266504	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	65266504	65266504	G	T	SNP	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562	tier1	-	-	74	0	0.00	70	5	6.67
MAML3	0	genome.wustl.edu	37	4	140811081	140811081	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	140811081	140811081	C	T	SNP	MAML3	ENST00000509479	human	ensembl	74_37	-1	known	silent	c.1509	p.Q503	1.000	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML3	HGNC	ENSG00000196782				51	0	0.00	39	3	7.14
MAP6	0	genome.wustl.edu	37	11	75319308	75319308	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	75319308	75319308	T	C	SNP	MAP6	ENST00000304771	human	ensembl	74_37	-1	known	missense	c.965	p.Q322R	1.000	pfam_MAP6/FAM154	pfam_MAP6/FAM154	-	no_errors	MAP6	HGNC	ENSG00000171533	tier1	-	-	100	0	0.00	126	12	8.70
MEGF6	0	genome.wustl.edu	37	1	3421858	3421858	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	3421858	3421858	C	A	SNP	MEGF6	ENST00000356575	human	ensembl	74_37	-1	known	missense	c.2102	p.C701F	1.000	smart_EG-like_dom,smart_EGF_laminin	pfam_EGF_laminin,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF_laminin,pfscan_EG-like_dom,pfscan_EMI_domain	-	no_errors	MEGF6	HGNC	ENSG00000162591	tier1	-	-	82	0	0.00	89	7	7.29
METTL13	0	genome.wustl.edu	37	1	171759717	171759717	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	171759717	171759717	G	C	SNP	METTL13	ENST00000361735	human	ensembl	74_37	+1	known	missense	c.1435	p.A479P	0.583	NULL	pfam_Methyltransf_11,pfam_Spermidine/spermine_synthase	-	no_errors	METTL13	HGNC	ENSG00000010165	tier1	-	-	60	0	0.00	41	4	8.89
METTL18	0	genome.wustl.edu	37	1	169762250	169762250	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	169762250	169762250	C	A	SNP	METTL18	ENST00000303469	human	ensembl	74_37	-1	known	missense	c.587	p.C196F	1.000	pfam_Nicotinamide_N-MeTfrase-like,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Small_mtfrase_dom	pfam_Nicotinamide_N-MeTfrase-like,pfam_Ribosomal-L11_MeTrfase_PrmA,pfam_Small_mtfrase_dom	-	no_errors	METTL18	HGNC	ENSG00000171806				40	0	0.00	60	4	6.25
MFN2	0	genome.wustl.edu	37	1	12056304	12056304	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	12056304	12056304	C	T	SNP	MFN2	ENST00000235329	human	ensembl	74_37	+1	known	missense	c.403	p.R135W	1.000	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase	pfam_Fzo/mitofusin_HR2,pfam_Dynamin_GTPase,superfamily_P-loop_NTPase	-	no_errors	MFN2	HGNC	ENSG00000116688	tier1	-	-	46	0	0.00	72	4	5.26
MGAM	0	genome.wustl.edu	37	7	141720844	141720844	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	141720844	141720844	C	A	SNP	MGAM	ENST00000549489	human	ensembl	74_37	+1	known	silent	c.519	p.L173	0.998	superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	MGAM	HGNC	ENSG00000257335	tier1	-	-	115	0	0.00	170	13	7.10
MIR409	0	genome.wustl.edu	37	14	101531639	101531639	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	101531639	101531639	G	T	SNP	MIR409	ENST00000362237	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	MIR409	HGNC	ENSG00000199107	tier1	-	-	74	0	0.00	99	7	6.60
MLF1IP	0	genome.wustl.edu	37	4	185637644	185637644	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	185637644	185637644	C	T	SNP	MLF1IP	ENST00000281453	human	ensembl	74_37	-1	known	silent	c.525	p.E175	0.009	NULL	NULL	-	no_errors	MLF1IP	HGNC	ENSG00000151725	tier1	-	-	100	0	0.00	77	6	7.23
MPP5	0	genome.wustl.edu	37	14	67799567	67799567	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	67799567	67799567	C	A	SNP	MPP5	ENST00000261681	human	ensembl	74_37	+1	known	missense	c.1922	p.T641K	0.999	pfam_GK/Ca_channel_bsu,superfamily_P-loop_NTPase,smart_GK/Ca_channel_bsu,pfscan_Guanylate_kin-like	pfam_GK/Ca_channel_bsu,pfam_L27_N,pfam_SH3_2,pfam_PDZ,pfam_SH3_domain,pfam_L27_C,superfamily_P-loop_NTPase,superfamily_SH3_domain,superfamily_PDZ,smart_L27,smart_PDZ,smart_SH3_domain,smart_GK/Ca_channel_bsu,pfscan_L27,pfscan_PDZ,pfscan_SH3_domain,pfscan_Guanylate_kin-like	-	no_errors	MPP5	HGNC	ENSG00000072415	tier1	-	-	50	0	0.00	86	8	8.51
MROH6	0	genome.wustl.edu	37	8	144650733	144650733	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	8	144650733	144650733	C	T	SNP	MROH6	ENST00000398882	human	ensembl	74_37	-1	known	missense	c.1633	p.D545N	0.125	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH6	HGNC	ENSG00000204839	tier1	-	-	53	0	0.00	48	8	14.29
MROH7-TTC4	0	genome.wustl.edu	37	1	55145629	55145629	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	55145629	55145629	G	T	SNP	MROH7-TTC4	ENST00000414150	human	ensembl	74_37	+1	known	missense	c.2292	p.Q764H	0.783	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH7-TTC4	HGNC	ENSG00000271723	tier1	-	-	69	0	0.00	67	6	8.22
MROH8	0	genome.wustl.edu	37	20	35749434	35749434	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	35749434	35749434	G	A	SNP	MROH8	ENST00000400441	human	ensembl	74_37	-1	known	missense	c.1982	p.A661V	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH8	HGNC	ENSG00000101353	tier1	-	-	88	0	0.00	80	15	15.79
MROH9	0	genome.wustl.edu	37	1	170983336	170983336	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	170983336	170983336	C	T	SNP	MROH9	ENST00000367759	human	ensembl	74_37	+1	known	missense	c.1675	p.P559S	0.083	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	MROH9	HGNC	ENSG00000117501	tier1	-	-	31	0	0.00	56	4	6.67
MRPL18	0	genome.wustl.edu	37	6	160212043	160212043	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	160212043	160212043	G	A	SNP	MRPL18	ENST00000367034	human	ensembl	74_37	+1	known	missense	c.124	p.E42K	1.000	NULL	pfam_Ribosomal_L18/L5	-	no_errors	MRPL18	HGNC	ENSG00000112110	tier1	-	-	88	0	0.00	113	10	8.13
MTMR14	0	genome.wustl.edu	37	3	9726928	9726928	+	Silent	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	9726928	9726928	G	A	SNP	MTMR14	ENST00000296003	human	ensembl	74_37	+1	known	silent	c.1161	p.E387	1.000	NULL	NULL	-	no_errors	MTMR14	HGNC	ENSG00000163719	tier1	-	-	58	0	0.00	71	10	12.35
MTUS2	0	genome.wustl.edu	37	13	29599324	29599324	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	13	29599324	29599324	G	T	SNP	MTUS2	ENST00000431530	human	ensembl	74_37	+1	known	silent	c.519	p.L173	0.146	NULL	NULL	-	no_errors	MTUS2	HGNC	ENSG00000132938	tier1	-	-	50	0	0.00	41	6	12.77
MUC12	0	genome.wustl.edu	37	7	100648403	100648403	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	100648403	100648403	C	G	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.14559	p.F4853L	0.012	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	113	0	0.00	139	9	6.08
MUC12	0	genome.wustl.edu	37	7	100648615	100648615	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	100648615	100648615	C	T	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	missense	c.14771	p.S4924F	0.001	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	138	0	0.00	141	19	11.88
MUC15	0	genome.wustl.edu	37	11	26587248	26587248	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	26587248	26587248	G	C	SNP	MUC15	ENST00000436318	human	ensembl	74_37	-1	known	missense	c.239	p.A80G	0.000	NULL	NULL	-	no_errors	MUC15	HGNC	ENSG00000169550	tier1	-	-	107	0	0.00	120	7	5.51
MUC19	0	genome.wustl.edu	37	12	40858259	40858259	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	40858259	40858259	G	T	SNP	MUC19	ENST00000454784	human	ensembl	74_37	+1	novel	missense	c.3632	p.S1211I	0.001	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich	-	no_errors	MUC19	HGNC	ENSG00000205592	tier1	-	-	40	0	0.00	54	4	6.90
MUC4	0	genome.wustl.edu	37	3	195517903	195517903	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	195517903	195517903	G	T	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	missense	c.548	p.S183Y	0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	-	-	83	0	0.00	80	20	20.00
MUC5B	0	genome.wustl.edu	37	11	1272626	1272626	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	1272626	1272626	C	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.14525	p.S4842Y	0.002	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983	tier1	-	-	106	0	0.00	147	14	8.70
MUC5B	0	genome.wustl.edu	37	11	1263506	1263506	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	1263506	1263506	C	A	SNP	MUC5B	ENST00000447027	human	ensembl	74_37	+1	known	missense	c.5405	p.P1802Q	0.932	NULL	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_C	-	no_errors	MUC5B	HGNC	ENSG00000117983				54	0	0.00	28	3	9.68
MUC7	0	genome.wustl.edu	37	4	71347113	71347113	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	71347113	71347113	C	A	SNP	MUC7	ENST00000304887	human	ensembl	74_37	+1	known	missense	c.652	p.P218T	0.001	NULL	NULL	-	no_errors	MUC7	HGNC	ENSG00000171195	tier1	-	-	165	0	0.00	205	36	14.94
MYADML	0	genome.wustl.edu	37	2	33951234	33951234	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	33951234	33951234	C	A	SNP	MYADML	ENST00000474610	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	MYADML	HGNC	ENSG00000239649				24	0	0.00	22	3	11.54
MYCBPAP	0	genome.wustl.edu	37	17	48599356	48599356	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	48599356	48599356	G	C	SNP	MYCBPAP	ENST00000323776	human	ensembl	74_37	+1	known	missense	c.1300	p.D434H	0.365	NULL	NULL	-	no_errors	MYCBPAP	HGNC	ENSG00000136449	tier1	-	-	85	0	0.00	88	12	12.00
MYH13	0	genome.wustl.edu	37	17	10204930	10204930	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	10204930	10204930	G	T	SNP	MYH13	ENST00000252172	human	ensembl	74_37	-1	known	missense	c.5758	p.Q1920K	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH13	HGNC	ENSG00000006788	tier1	-	-	80	0	0.00	105	11	9.48
MYH13	0	genome.wustl.edu	37	17	10216024	10216024	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	10216024	10216024	G	T	SNP	MYH13	ENST00000252172	human	ensembl	74_37	-1	known	missense	c.4232	p.A1411E	0.911	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH13	HGNC	ENSG00000006788	tier1	-	-	58	0	0.00	85	6	6.59
MYH2	0	genome.wustl.edu	37	17	10432019	10432019	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	10432019	10432019	G	T	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	silent	c.3732	p.V1244	0.861	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414	tier1	-	-	135	0	0.00	167	15	8.24
MYH8	0	genome.wustl.edu	37	17	10296408	10296408	+	Silent	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	10296408	10296408	G	A	SNP	MYH8	ENST00000403437	human	ensembl	74_37	-1	known	silent	c.5286	p.I1762	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH8	HGNC	ENSG00000133020	tier1	-	-	142	0	0.00	181	13	6.70
MYL6	0	genome.wustl.edu	37	12	56552187	56552187	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	56552187	56552187	T	C	SNP	MYL6	ENST00000547649	human	ensembl	74_37	+1	known	missense	c.2	p.M1T	1.000	NULL	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	MYL6	HGNC	ENSG00000092841	tier1	-	-	56	0	0.00	55	4	6.78
NBPF22P	0	genome.wustl.edu	37	5	85583508	85583508	+	RNA	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	5	85583508	85583508	G	C	SNP	NBPF22P	ENST00000590707	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	NBPF22P	HGNC	ENSG00000205449	tier1	-	-	155	0	0.00	125	10	7.41
NDUFB10	0	genome.wustl.edu	37	16	2011893	2011893	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	2011893	2011893	G	A	SNP	NDUFB10	ENST00000268668	human	ensembl	74_37	+1	known	missense	c.505	p.A169T	0.374	NULL	pfam_NADH_UbQ_OxRdtase_su10	-	no_errors	NDUFB10	HGNC	ENSG00000140990				61	0	0.00	63	4	5.97
NEDD8-MDP1	0	genome.wustl.edu	37	14	24686403	24686403	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	24686403	24686403	T	A	SNP	NEDD8-MDP1	ENST00000605847	human	ensembl	74_37	-1	known	missense	c.176	p.Y59F	1.000	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	NEDD8-MDP1	HGNC	ENSG00000255526				43	0	0.00	74	5	6.33
NEK10	0	genome.wustl.edu	37	3	27385845	27385845	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	27385845	27385845	C	A	SNP	NEK10	ENST00000341435	human	ensembl	74_37	-1	known	nonsense	c.280	p.E94*	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Aminoglycoside_PTrfase,pfam_RIO-like_kinase,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	NEK10	HGNC	ENSG00000163491	tier1	-	-	71	0	0.00	64	5	7.25
NFKB1	0	genome.wustl.edu	37	4	103518697	103518697	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	103518697	103518697	G	A	SNP	NFKB1	ENST00000226574	human	ensembl	74_37	+1	known	missense	c.1516	p.A506T	1.000	NULL	pfam_RHD,pfam_Ankyrin_rpt,pfam_Death_domain,superfamily_p53-like_TF_DNA-bd,superfamily_Ankyrin_rpt-contain_dom,superfamily_Ig_E-set,superfamily_DEATH-like_dom,smart_IPT,smart_Ankyrin_rpt,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_RHD,prints_NF_Rel_Dor,prints_Ankyrin_rpt	-	no_errors	NFKB1	HGNC	ENSG00000109320	tier1	-	-	61	0	0.00	50	12	19.35
NKAIN4	0	genome.wustl.edu	37	20	61879034	61879034	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	61879034	61879034	C	G	SNP	NKAIN4	ENST00000370316	human	ensembl	74_37	-1	known	missense	c.367	p.G123R	0.121	pfam_Na/K-Atpase_Interacting	pfam_Na/K-Atpase_Interacting	-	no_errors	NKAIN4	HGNC	ENSG00000101198	tier1	-	-	57	0	0.00	52	5	8.77
NMUR1	0	genome.wustl.edu	37	2	232393634	232393634	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	232393634	232393634	C	T	SNP	NMUR1	ENST00000305141	human	ensembl	74_37	-1	known	missense	c.98	p.G33E	0.006	prints_NeuromedU_rcpt_1	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_NeuromedU_rcpt_1,prints_NeuromedU_rcpt,prints_GPCR_Rhodpsn	-	no_errors	NMUR1	HGNC	ENSG00000171596				36	0	0.00	44	3	6.38
NOB1	0	genome.wustl.edu	37	16	69788599	69788599	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	69788599	69788599	C	A	SNP	NOB1	ENST00000268802	human	ensembl	74_37	-1	known	nonsense	c.94	p.E32*	1.000	smart_PIN_dom,pirsf_D-site_20S_pre-rRNA_nuclease	pfam_NOB1_Zn-bd,smart_PIN_dom,pirsf_D-site_20S_pre-rRNA_nuclease	-	no_errors	NOB1	HGNC	ENSG00000141101	tier1	-	-	40	0	0.00	52	6	10.34
NOL8	0	genome.wustl.edu	37	9	95076562	95076562	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	95076562	95076562	G	C	SNP	NOL8	ENST00000442668	human	ensembl	74_37	-1	known	missense	c.2345	p.A782G	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	NOL8	HGNC	ENSG00000198000				38	0	0.00	48	4	7.69
NOMO2	0	genome.wustl.edu	37	16	18540863	18540863	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	18540863	18540863	C	A	SNP	NOMO2	ENST00000381474	human	ensembl	74_37	-1	known	missense	c.1766	p.G589V	1.000	NULL	pfam_DUF2012,superfamily_Carb-bd-like_fold,superfamily_CarboxyPept-like_regulatory,superfamily_Collagen-bd_Cna_B-typ_dom	-	no_errors	NOMO2	HGNC	ENSG00000185164				137	0	0.00	123	9	6.82
NPAS3	0	genome.wustl.edu	37	14	34269169	34269169	+	Silent	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	34269169	34269169	G	A	SNP	NPAS3	ENST00000356141	human	ensembl	74_37	+1	known	silent	c.1656	p.A552	0.849	NULL	pfam_PAS_fold_3,pfam_PAS_fold,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NPAS3	HGNC	ENSG00000151322	tier1	-	-	72	0	0.00	64	11	14.47
NPBWR2	0	genome.wustl.edu	37	20	62737512	62737512	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	62737512	62737512	C	G	SNP	NPBWR2	ENST00000369768	human	ensembl	74_37	-1	known	missense	c.673	p.V225L	0.983	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Neuropept_B/W_rcpt,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Opioid_rcpt,prints_NPY_rcpt	-	no_errors	NPBWR2	HGNC	ENSG00000125522	tier1	-	-	50	0	0.00	48	9	15.79
NPHP3	0	genome.wustl.edu	37	3	132441160	132441160	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	132441160	132441160	C	A	SNP	NPHP3	ENST00000337331	human	ensembl	74_37	-1	known	nonsense	c.40	p.E14*	1.000	NULL	pfam_TPR_1,pfam_TPR-3,superfamily_P-loop_NTPase,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NPHP3	HGNC	ENSG00000113971	tier1	-	-	21	0	0.00	17	4	19.05
NPIPA7	0	genome.wustl.edu	37	16	16481333	16481333	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	16481333	16481333	G	T	SNP	NPIPA7	ENST00000530217	human	ensembl	74_37	+1	novel	missense	c.270	p.R90S	0.187	NULL	NULL	-	no_errors	NPIPA7	HGNC	ENSG00000214967	tier1	-	-	25	0	0.00	17	5	22.73
NPTX2	0	genome.wustl.edu	37	7	98256637	98256637	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	98256637	98256637	T	C	SNP	NPTX2	ENST00000265634	human	ensembl	74_37	+1	known	missense	c.1049	p.L350P	1.000	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	NPTX2	HGNC	ENSG00000106236	tier1	-	-	44	0	0.00	61	4	6.15
NPTXR	0	genome.wustl.edu	37	22	39222664	39222664	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	22	39222664	39222664	C	A	SNP	NPTXR	ENST00000333039	human	ensembl	74_37	-1	known	silent	c.939	p.L313	1.000	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin	pfam_Pentaxin,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	NPTXR	HGNC	ENSG00000221890	tier1	-	-	32	0	0.00	45	6	11.54
NRXN1	0	genome.wustl.edu	37	2	50148877	50148877	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	50148877	50148877	C	A	SNP	NRXN1	ENST00000484192	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	65	0	0.00	108	7	6.09
NUP107	0	genome.wustl.edu	37	12	69083376	69083376	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	69083376	69083376	C	T	SNP	NUP107	ENST00000229179	human	ensembl	74_37	+1	known	missense	c.164	p.T55I	1.000	NULL	pfam_Nup84_Nup100	-	no_errors	NUP107	HGNC	ENSG00000111581				45	0	0.00	71	4	5.33
NWD1	0	genome.wustl.edu	37	19	16883997	16883997	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	16883997	16883997	C	A	SNP	NWD1	ENST00000379808	human	ensembl	74_37	+1	known	missense	c.2471	p.P824Q	0.071	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NWD1	HGNC	ENSG00000188039	tier1	-	-	61	0	0.00	50	5	9.09
OBSCN	0	genome.wustl.edu	37	1	228495817	228495817	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	228495817	228495817	G	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	nonsense	c.12472	p.E4158*	0.955	pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358				64	0	0.00	59	4	6.35
OCA2	0	genome.wustl.edu	37	15	28326850	28326850	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	15	28326850	28326850	C	A	SNP	OCA2	ENST00000354638	human	ensembl	74_37	-1	known	silent	c.171	p.G57	0.001	NULL	pfam_Cit_transptr-like_dom,pfam_Na/sul_symport,pfam_Arsenical_pump_ArsB,tigrfam_Arsenical_pump_ArsB	-	no_errors	OCA2	HGNC	ENSG00000104044	tier1	-	-	22	0	0.00	17	6	26.09
OGDHL	0	genome.wustl.edu	37	10	50953480	50953480	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	50953480	50953480	C	A	SNP	OGDHL	ENST00000374103	human	ensembl	74_37	-1	known	missense	c.1539	p.M513I	1.000	pfam_DH_E1,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	pfam_DH_E1,pfam_Transketolase-like_Pyr-bd,smart_Transketolase-like_Pyr-bd,pirsf_2oxoglutarate_DH_E1,tigrfam_2oxoglutarate_DH_E1	-	no_errors	OGDHL	HGNC	ENSG00000197444	tier1	-	-	54	0	0.00	49	12	19.67
OPCML	0	genome.wustl.edu	37	11	132289974	132289974	+	RNA	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	132289974	132289974	T	A	SNP	OPCML	ENST00000529038	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	OPCML	HGNC	ENSG00000183715	tier1	-	-	51	0	0.00	52	8	13.33
OR10G4	0	genome.wustl.edu	37	11	123887127	123887127	+	Silent	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	123887127	123887127	C	G	SNP	OR10G4	ENST00000320891	human	ensembl	74_37	+1	known	silent	c.846	p.L282	0.179	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G4	HGNC	ENSG00000254737	tier1	-	-	145	0	0.00	152	8	5.00
OR10G6	0	genome.wustl.edu	37	11	123865350	123865350	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	123865350	123865350	C	A	SNP	OR10G6	ENST00000307002	human	ensembl	74_37	-1	known	silent	c.519	p.G173	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR10G6	HGNC	ENSG00000198674	tier1	-	-	58	0	0.00	65	5	7.14
OR2D3	0	genome.wustl.edu	37	11	6942744	6942744	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	6942744	6942744	T	A	SNP	OR2D3	ENST00000317834	human	ensembl	74_37	+1	known	missense	c.512	p.V171E	0.785	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2D3	HGNC	ENSG00000178358	tier1	-	-	55	0	0.00	45	7	13.46
OR2K2	0	genome.wustl.edu	37	9	114089878	114089878	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	114089878	114089878	A	T	SNP	OR2K2	ENST00000374428	human	ensembl	74_37	-1	known	missense	c.923	p.V308E	0.054	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2K2	HGNC	ENSG00000171133	tier1	-	-	84	0	0.00	87	13	13.00
OR2L2	0	genome.wustl.edu	37	1	248201852	248201852	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	248201852	248201852	G	T	SNP	OR2L2	ENST00000366479	human	ensembl	74_37	+1	known	nonsense	c.283	p.G95*	0.042	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2L2	HGNC	ENSG00000203663	tier1	-	-	121	0	0.00	183	26	12.44
OR2L3	0	genome.wustl.edu	37	1	248224700	248224700	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	248224700	248224700	C	A	SNP	OR2L3	ENST00000359959	human	ensembl	74_37	+1	known	silent	c.717	p.T239	0.842	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2L3	HGNC	ENSG00000198128	tier1	-	-	198	0	0.00	196	32	14.04
OR2T33	0	genome.wustl.edu	37	1	248436323	248436323	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	248436323	248436323	G	T	SNP	OR2T33	ENST00000318021	human	ensembl	74_37	-1	known	missense	c.794	p.S265Y	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T33	HGNC	ENSG00000177212	tier1	-	-	143	0	0.00	159	10	5.88
OR2T4	0	genome.wustl.edu	37	1	248525025	248525025	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	248525025	248525025	G	A	SNP	OR2T4	ENST00000366475	human	ensembl	74_37	+1	known	missense	c.143	p.G48E	0.430	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T4	HGNC	ENSG00000196944	tier1	-	-	112	0	0.00	103	12	10.43
OR4A15	0	genome.wustl.edu	37	11	55135605	55135605	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	55135605	55135605	C	A	SNP	OR4A15	ENST00000314706	human	ensembl	74_37	+1	known	silent	c.246	p.S82	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4A15	HGNC	ENSG00000181958	tier1	-	-	78	0	0.00	108	7	6.09
OR4C15	0	genome.wustl.edu	37	11	55322145	55322145	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	55322145	55322145	C	T	SNP	OR4C15	ENST00000314644	human	ensembl	74_37	+1	known	silent	c.363	p.F121	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C15	HGNC	ENSG00000181939	tier1	-	-	82	0	0.00	103	14	11.97
OR4C6	0	genome.wustl.edu	37	11	55432966	55432966	+	Silent	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	55432966	55432966	G	C	SNP	OR4C6	ENST00000314259	human	ensembl	74_37	+1	known	silent	c.324	p.V108	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C6	HGNC	ENSG00000181903	tier1	-	-	50	0	0.00	52	7	11.86
OR51I1	0	genome.wustl.edu	37	11	5462136	5462136	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	5462136	5462136	C	G	SNP	OR51I1	ENST00000380211	human	ensembl	74_37	-1	known	missense	c.609	p.L203F	0.043	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51I1	HGNC	ENSG00000167359	tier1	-	-	30	0	0.00	25	4	13.79
OR5D13	0	genome.wustl.edu	37	11	55541210	55541210	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	55541210	55541210	C	A	SNP	OR5D13	ENST00000361760	human	ensembl	74_37	+1	known	nonsense	c.297	p.C99*	0.968	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5D13	HGNC	ENSG00000198877	tier1	-	-	77	0	0.00	109	6	5.22
OR5H1	0	genome.wustl.edu	37	3	97851625	97851625	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	97851625	97851625	C	G	SNP	OR5H1	ENST00000354565	human	ensembl	74_37	+1	known	missense	c.84	p.F28L	0.794	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5H1	HGNC	ENSG00000231192	tier1	-	-	112	0	0.00	129	10	7.19
OR6J1	0	genome.wustl.edu	37	14	23103617	23103617	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	23103617	23103617	A	G	SNP	OR6J1	ENST00000540461	human	ensembl	74_37	-1	known	missense	c.100	p.F34L	0.975	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR6J1	HGNC	ENSG00000255804	tier1	-	-	65	0	0.00	76	8	9.52
OR8D2	0	genome.wustl.edu	37	11	124190034	124190034	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	124190034	124190034	G	T	SNP	OR8D2	ENST00000357438	human	ensembl	74_37	-1	known	silent	c.60	p.R20	0.003	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8D2	HGNC	ENSG00000197263				62	0	0.00	69	4	5.48
OR8S1	0	genome.wustl.edu	37	12	48919789	48919789	+	Silent	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	48919789	48919789	C	G	SNP	OR8S1	ENST00000310194	human	ensembl	74_37	+1	known	silent	c.375	p.A125	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8S1	HGNC	ENSG00000197376	tier1	-	-	32	0	0.00	59	11	15.71
OSBPL10	0	genome.wustl.edu	37	3	31774813	31774813	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	31774813	31774813	T	A	SNP	OSBPL10	ENST00000396556	human	ensembl	74_37	-1	known	missense	c.1031	p.N344I	1.000	NULL	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL10	HGNC	ENSG00000144645	tier1	-	-	86	0	0.00	91	5	5.21
OTOG	0	genome.wustl.edu	37	11	17582284	17582284	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	17582284	17582284	G	T	SNP	OTOG	ENST00000399391	human	ensembl	74_37	+1	known	silent	c.1407	p.V469	1.000	superfamily_TIL_dom	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_AbfB,pfam_TIL_dom,superfamily_AbfB,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_EG-like_dom	-	no_errors	OTOG	HGNC	ENSG00000188162	tier1	-	-	49	0	0.00	49	4	7.55
OTOL1	0	genome.wustl.edu	37	3	161216961	161216961	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	161216961	161216961	C	G	SNP	OTOL1	ENST00000327928	human	ensembl	74_37	+1	known	missense	c.367	p.P123A	0.066	pfam_Collagen	pfam_Collagen,pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	OTOL1	HGNC	ENSG00000182447	tier1	-	-	107	0	0.00	117	8	6.40
OTOP2	0	genome.wustl.edu	37	17	72927175	72927175	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	72927175	72927175	C	T	SNP	OTOP2	ENST00000331427	human	ensembl	74_37	+1	known	missense	c.1445	p.S482L	0.000	NULL	pfam_Otopetrin	-	no_errors	OTOP2	HGNC	ENSG00000183034	tier1	-	-	58	0	0.00	76	11	12.64
OXCT2	0	genome.wustl.edu	37	1	40236196	40236196	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	40236196	40236196	C	T	SNP	OXCT2	ENST00000327582	human	ensembl	74_37	-1	known	silent	c.732	p.E244	1.000	pfam_CoA_trans_fam_I,smart_CoA_trans_fam_I,pirsf_3-oxoacid_CoA-transferase	pfam_CoA_trans_fam_I,smart_CoA_trans_fam_I,pirsf_3-oxoacid_CoA-transferase,tigrfam_3-oxoacid_CoA-transf_B,tigrfam_3-oxoacid_CoA-transf_A	-	no_errors	OXCT2	HGNC	ENSG00000198754	tier1	-	-	38	0	0.00	55	8	12.70
P2RY13	0	genome.wustl.edu	37	3	151046747	151046747	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	151046747	151046747	A	T	SNP	P2RY13	ENST00000325602	human	ensembl	74_37	-1	known	missense	c.97	p.S33T	0.989	prints_P2Y13_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,prints_P2Y13_rcpt,prints_GPCR_Rhodpsn,prints_P2Y14_rcpt,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	P2RY13	HGNC	ENSG00000181631				57	0	0.00	51	4	7.27
PABPC3	0	genome.wustl.edu	37	13	25670529	25670529	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	13	25670529	25670529	G	A	SNP	PABPC3	ENST00000281589	human	ensembl	74_37	+1	known	missense	c.193	p.A65T	1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_PABP_1234	pfam_RRM_dom,pfam_PABP_HYD,superfamily_PABP_HYD,smart_RRM_dom,smart_RRM_dom_euk,smart_PABP_HYD,pfscan_RRM_dom,tigrfam_PABP_1234	-	no_errors	PABPC3	HGNC	ENSG00000151846	tier1	-	-	90	0	0.00	95	5	5.00
PACRG	0	genome.wustl.edu	37	6	163483273	163483273	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	163483273	163483273	G	T	SNP	PACRG	ENST00000337019	human	ensembl	74_37	+1	known	missense	c.383	p.R128L	0.971	pfam_Parkin_co-regulated_protein,superfamily_ARM-type_fold	pfam_Parkin_co-regulated_protein,superfamily_ARM-type_fold	-	no_errors	PACRG	HGNC	ENSG00000112530	tier1	-	-	61	0	0.00	75	5	6.25
PARD3	0	genome.wustl.edu	37	10	34408625	34408625	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	34408625	34408625	G	A	SNP	PARD3	ENST00000374789	human	ensembl	74_37	-1	known	missense	c.3593	p.S1198F	1.000	NULL	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3	HGNC	ENSG00000148498	tier1	-	-	63	0	0.00	69	13	15.85
PARD3B	0	genome.wustl.edu	37	2	205986337	205986337	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	205986337	205986337	G	T	SNP	PARD3B	ENST00000406610	human	ensembl	74_37	+1	known	missense	c.829	p.A277S	1.000	superfamily_PDZ,smart_PDZ,pfscan_PDZ	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3B	HGNC	ENSG00000116117	tier1	-	-	59	0	0.00	70	4	5.41
PAX9	0	genome.wustl.edu	37	14	37131038	37131038	+	RNA	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	37131038	37131038	G	A	SNP	PAX9	ENST00000553267	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	PAX9	HGNC	ENSG00000198807	tier1	-	-	26	0	0.00	52	6	10.34
PCDH12	0	genome.wustl.edu	37	5	141331136	141331136	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	5	141331136	141331136	G	T	SNP	PCDH12	ENST00000231484	human	ensembl	74_37	-1	known	missense	c.2900	p.S967Y	1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH12	HGNC	ENSG00000113555	tier1	-	-	74	0	0.00	79	6	7.06
PCDH18	0	genome.wustl.edu	37	4	138452880	138452880	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	138452880	138452880	G	C	SNP	PCDH18	ENST00000344876	human	ensembl	74_37	-1	known	missense	c.363	p.F121L	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH18	HGNC	ENSG00000189184	tier1	-	-	83	0	0.00	85	6	6.59
PCDHB14	0	genome.wustl.edu	37	5	140603152	140603152	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	5	140603152	140603152	G	T	SNP	PCDHB14	ENST00000239449	human	ensembl	74_37	+1	known	silent	c.75	p.R25	0.030	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB14	HGNC	ENSG00000120327	tier1	-	-	98	0	0.00	90	7	7.22
PCNXL3	0	genome.wustl.edu	37	11	65403111	65403111	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	65403111	65403111	C	T	SNP	PCNXL3	ENST00000355703	human	ensembl	74_37	+1	known	missense	c.5296	p.R1766C	1.000	pfam_Pecanex	pfam_Pecanex	-	no_errors	PCNXL3	HGNC	ENSG00000197136	tier1	-	-	57	0	0.00	81	11	11.96
PDE1B	0	genome.wustl.edu	37	12	54962952	54962952	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	54962952	54962952	C	A	SNP	PDE1B	ENST00000550285	human	ensembl	74_37	+1	known	missense	c.274	p.P92T	0.000	NULL	NULL	-	no_errors	PDE1B	HGNC	ENSG00000123360	tier1	-	-	114	0	0.00	165	10	5.71
PDE6C	0	genome.wustl.edu	37	10	95399842	95399842	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	95399842	95399842	G	A	SNP	PDE6C	ENST00000371447	human	ensembl	74_37	+1	known	missense	c.1498	p.D500N	0.997	NULL	pfam_PDEase_catalytic_dom,pfam_GAF,smart_GAF,smart_HD/PDEase_dom,prints_PDEase	-	no_errors	PDE6C	HGNC	ENSG00000095464	tier1	-	-	76	0	0.00	90	6	6.25
PDIA2	0	genome.wustl.edu	37	16	336368	336368	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	336368	336368	C	A	SNP	PDIA2	ENST00000219406	human	ensembl	74_37	+1	known	missense	c.1135	p.Q379K	0.998	superfamily_Thioredoxin-like_fold,tigrfam_Prot_disulphide_isomerase	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,tigrfam_Prot_disulphide_isomerase	-	no_errors	PDIA2	HGNC	ENSG00000185615	tier1	-	-	80	0	0.00	91	8	8.08
PDZD2	0	genome.wustl.edu	37	5	31983407	31983407	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	5	31983407	31983407	G	A	SNP	PDZD2	ENST00000282493	human	ensembl	74_37	+1	known	missense	c.623	p.R208Q	0.002	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PDZD2	HGNC	ENSG00000133401	tier1	rs149201593	-	80	0	0.00	89	5	5.32
PGA3	0	genome.wustl.edu	37	11	60971723	60971723	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	60971723	60971723	C	A	SNP	PGA3	ENST00000325558	human	ensembl	74_37	+1	known	silent	c.201	p.P67	0.076	superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,pfam_Aspartic_peptidase_N,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	-	no_errors	PGA3	HGNC	ENSG00000229859				132	0	0.00	146	9	5.81
PGK2	0	genome.wustl.edu	37	6	49754035	49754035	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	49754035	49754035	C	T	SNP	PGK2	ENST00000304801	human	ensembl	74_37	-1	known	missense	c.866	p.G289E	0.951	pfam_Phosphoglycerate_kinase,superfamily_Phosphoglycerate_kinase	pfam_Phosphoglycerate_kinase,superfamily_Phosphoglycerate_kinase,prints_Phosphoglycerate_kinase	-	no_errors	PGK2	HGNC	ENSG00000170950	tier1	-	-	56	0	0.00	64	7	9.86
PGLYRP2	0	genome.wustl.edu	37	19	15582811	15582811	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	15582811	15582811	G	T	SNP	PGLYRP2	ENST00000292609	human	ensembl	74_37	-1	known	missense	c.1233	p.H411Q	1.000	pfam_Amidase_domain,superfamily_Amidase_domain,smart_PGRP_domain_met/bac,smart_Amidase_domain	pfam_Amidase_domain,superfamily_Amidase_domain,smart_PGRP_domain_met/bac,smart_Amidase_domain	-	no_errors	PGLYRP2	HGNC	ENSG00000161031	tier1	-	-	109	0	0.00	115	12	9.45
PHACTR1	0	genome.wustl.edu	37	6	13228205	13228205	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	13228205	13228205	G	T	SNP	PHACTR1	ENST00000379350	human	ensembl	74_37	+1	known	nonsense	c.1144	p.E382*	1.000	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR1	HGNC	ENSG00000112137	tier1	-	-	61	0	0.00	69	8	10.39
PHACTR3	0	genome.wustl.edu	37	20	58330273	58330273	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	58330273	58330273	C	T	SNP	PHACTR3	ENST00000371015	human	ensembl	74_37	+1	known	missense	c.395	p.P132L	0.016	NULL	pfam_RPEL_repeat,smart_RPEL_repeat,pfscan_RPEL_repeat	-	no_errors	PHACTR3	HGNC	ENSG00000087495	tier1	-	-	63	0	0.00	60	4	6.25
PHB	0	genome.wustl.edu	37	17	47486521	47486521	+	Splice_Site	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	47486521	47486521	C	A	SNP	PHB	ENST00000300408	human	ensembl	74_37	-1	known	splice_site	c.394-1	e4-1	1.000	-	-	-	no_errors	PHB	HGNC	ENSG00000167085	tier1	-	-	54	0	0.00	89	6	6.32
PHLDB1	0	genome.wustl.edu	37	11	118499143	118499143	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	118499143	118499143	G	A	SNP	PHLDB1	ENST00000361417	human	ensembl	74_37	+1	known	missense	c.1604	p.S535N	1.000	NULL	pfam_Pleckstrin_homology,superfamily_SMAD_FHA_domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB1	HGNC	ENSG00000019144	tier1	-	-	81	0	0.00	83	7	7.78
PIGR	0	genome.wustl.edu	37	1	207110474	207110474	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	207110474	207110474	C	T	SNP	PIGR	ENST00000356495	human	ensembl	74_37	-1	known	silent	c.1011	p.S337	0.002	smart_Ig_sub	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PIGR	HGNC	ENSG00000162896	tier1	rs148222338	-	41	0	0.00	53	7	11.67
PIK3R5	0	genome.wustl.edu	37	17	8791623	8791623	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	8791623	8791623	G	A	SNP	PIK3R5	ENST00000447110	human	ensembl	74_37	-1	known	missense	c.1481	p.A494V	0.179	pfam_PI3K_1B_gamma_p101_su	pfam_PI3K_1B_gamma_p101_su	-	no_errors	PIK3R5	HGNC	ENSG00000141506				50	0	0.00	61	4	6.15
PITPNC1	0	genome.wustl.edu	37	17	65688960	65688960	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	65688960	65688960	G	T	SNP	PITPNC1	ENST00000335257	human	ensembl	74_37	+1	known	missense	c.955	p.G319C	1.000	NULL	pfam_PI_transfer,prints_PI_transfer	-	no_errors	PITPNC1	HGNC	ENSG00000154217	tier1	-	-	47	0	0.00	41	8	16.33
PKN1	0	genome.wustl.edu	37	19	14578588	14578588	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	14578588	14578588	C	A	SNP	PKN1	ENST00000342216	human	ensembl	74_37	+1	known	silent	c.1885	p.R629	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_HR1_rho-bd,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,superfamily_C2_dom,smart_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	PKN1	HGNC	ENSG00000123143	tier1	-	-	100	0	0.00	87	11	11.22
PLB1	0	genome.wustl.edu	37	2	28820876	28820876	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	28820876	28820876	G	T	SNP	PLB1	ENST00000422425	human	ensembl	74_37	+1	known	nonsense	c.2293	p.G765*	0.997	pfam_Lipase_GDSL	pfam_Lipase_GDSL	-	no_errors	PLB1	HGNC	ENSG00000163803	tier1	-	-	64	0	0.00	91	11	10.78
PLK5	0	genome.wustl.edu	37	19	1531846	1531846	+	Silent	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	1531846	1531846	G	C	SNP	PLK5	ENST00000334770	human	ensembl	74_37	+1	known	silent	c.678	p.T226	1.000	NULL	superfamily_Kinase-like_dom,pfscan_Prot_kinase_dom	-	no_errors	PLK5	HGNC	ENSG00000185988	tier1	-	-	66	0	0.00	77	8	9.41
PLXNA4	0	genome.wustl.edu	37	7	132169579	132169579	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	132169579	132169579	G	T	SNP	PLXNA4	ENST00000378539	human	ensembl	74_37	-1	known	missense	c.1565	p.S522Y	0.000	NULL	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	-	no_errors	PLXNA4	HGNC	ENSG00000221866	tier1	-	-	83	0	0.00	91	8	8.08
PMS2	0	genome.wustl.edu	37	7	6045569	6045569	+	Silent	SNP	T	T	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	6045569	6045569	T	C	SNP	PMS2	ENST00000265849	human	ensembl	74_37	-1	known	silent	c.117	p.V39	0.993	pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,tigrfam_DNA_mismatch_repair_N	pfam_MutL_C,pfam_DNA_mismatch_repair_C,pfam_HATPase_ATP-bd,superfamily_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,smart_MutL_C,tigrfam_DNA_mismatch_repair_N	-	no_errors	PMS2	HGNC	ENSG00000122512	tier1	rs34839707	-	424	0	0.00	459	37	7.46
PNMA3	0	genome.wustl.edu	37	X	152226335	152226335	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	152226335	152226335	G	C	SNP	PNMA3	ENST00000370264	human	ensembl	74_37	+1	known	missense	c.923	p.R308P	0.000	NULL	superfamily_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	PNMA3	HGNC	ENSG00000183837	tier1	-	-	64	0	0.00	66	5	7.04
POFUT1	0	genome.wustl.edu	37	20	30818726	30818726	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	30818726	30818726	G	T	SNP	POFUT1	ENST00000375749	human	ensembl	74_37	+1	known	missense	c.840	p.M280I	1.000	pfam_GDP-Fuc_O-FucTrfase	pfam_GDP-Fuc_O-FucTrfase	-	no_errors	POFUT1	HGNC	ENSG00000101346	tier1	-	-	44	0	0.00	67	8	10.67
POLM	0	genome.wustl.edu	37	7	44113285	44113285	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	44113285	44113285	C	T	SNP	POLM	ENST00000242248	human	ensembl	74_37	-1	known	missense	c.1337	p.R446H	0.898	smart_DNA-dir_DNA_pol_X,pirsf_TdT/Mu,prints_TdT/Mu	pfam_DNA_pol_lambd_fingers_domain,superfamily_DNA_pol_b-like_N,superfamily_DNA_pol_lambd_fingers_domain,superfamily_BRCT_dom,smart_DNA-dir_DNA_pol_X,pirsf_TdT/Mu,pfscan_BRCT_dom,prints_TdT/Mu,prints_DNA_pol_X,prints_DNA_pol_X_beta-like	-	no_errors	POLM	HGNC	ENSG00000122678				38	0	0.00	67	4	5.56
POU5F2	0	genome.wustl.edu	37	5	93076834	93076834	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	5	93076834	93076834	C	A	SNP	POU5F2	ENST00000510627	human	ensembl	74_37	-1	known	missense	c.436	p.D146Y	0.997	pfam_POU_specific,superfamily_Lambda_DNA-bd_dom,smart_POU_specific,pfscan_POU_specific,prints_POU	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU5F2	HGNC	ENSG00000248483	tier1	-	-	54	0	0.00	62	4	6.06
PPAP2B	0	genome.wustl.edu	37	1	56977762	56977762	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	56977762	56977762	G	T	SNP	PPAP2B	ENST00000371250	human	ensembl	74_37	-1	known	missense	c.696	p.F232L	1.000	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	pfam_P_Acid_Pase_2/haloperoxidase,superfamily_P_Acid_Pase_2/haloperoxidase,smart_P_Acid_Pase_2/haloperoxidase	-	no_errors	PPAP2B	HGNC	ENSG00000162407	tier1	-	-	58	0	0.00	63	4	5.97
PPFIA2	0	genome.wustl.edu	37	12	81762631	81762631	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	81762631	81762631	C	A	SNP	PPFIA2	ENST00000549396	human	ensembl	74_37	-1	known	missense	c.1355	p.R452M	1.000	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	PPFIA2	HGNC	ENSG00000139220	tier1	-	-	74	0	0.00	88	9	9.28
PPP1R12B	0	genome.wustl.edu	37	1	202532001	202532001	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	202532001	202532001	C	A	SNP	PPP1R12B	ENST00000336894	human	ensembl	74_37	+1	known	missense	c.2603	p.A868D	1.000	pirsf_Pase-1_reg_su_12A/B/C_euk	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_12A/B/C_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R12B	HGNC	ENSG00000077157	tier1	-	-	82	0	0.00	110	7	5.98
PPP1R16B	0	genome.wustl.edu	37	20	37531341	37531341	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	37531341	37531341	G	T	SNP	PPP1R16B	ENST00000299824	human	ensembl	74_37	+1	known	missense	c.602	p.R201L	1.000	superfamily_Ankyrin_rpt-contain_dom,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pirsf_Pase-1_reg_su_16AB_euk,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	PPP1R16B	HGNC	ENSG00000101445	tier1	-	-	41	0	0.00	39	6	13.33
PPP2R5C	0	genome.wustl.edu	37	14	102349849	102349849	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	102349849	102349849	C	A	SNP	PPP2R5C	ENST00000422945	human	ensembl	74_37	+1	known	missense	c.672	p.F224L	1.000	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5C	HGNC	ENSG00000078304	tier1	-	-	93	0	0.00	103	20	16.26
PRAC2	0	genome.wustl.edu	37	17	46801787	46801787	+	RNA	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	46801787	46801787	G	C	SNP	PRAC2	ENST00000422730	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PRAC2	HGNC	ENSG00000229637	tier1	-	-	91	0	0.00	89	12	11.88
PRAMEF12	0	genome.wustl.edu	37	1	12835017	12835017	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	12835017	12835017	C	A	SNP	PRAMEF12	ENST00000357726	human	ensembl	74_37	+1	known	missense	c.7	p.L3I	0.001	NULL	NULL	-	no_errors	PRAMEF12	HGNC	ENSG00000116726	tier1	-	-	102	0	0.00	105	13	11.02
PRIM1	0	genome.wustl.edu	37	12	57132266	57132266	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	57132266	57132266	C	A	SNP	PRIM1	ENST00000338193	human	ensembl	74_37	-1	known	nonsense	c.1096	p.E366*	0.977	NULL	pfam_DNA_primase_S,tigrfam_DNA_primase_ssu_euk/arc	-	no_errors	PRIM1	HGNC	ENSG00000198056	tier1	-	-	51	0	0.00	51	9	15.00
PRKAR1B	0	genome.wustl.edu	37	7	716865	716865	+	Splice_Site	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	716865	716865	C	A	SNP	PRKAR1B	ENST00000360274	human	ensembl	74_37	-1	known	splice_site	c.440+1	e3+1	1.000	-	-	-	no_errors	PRKAR1B	HGNC	ENSG00000188191	tier1	-	-	45	0	0.00	60	8	11.59
PRKCB	0	genome.wustl.edu	37	16	24135200	24135200	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	24135200	24135200	G	T	SNP	PRKCB	ENST00000303531	human	ensembl	74_37	+1	known	silent	c.963	p.T321	0.000	superfamily_Kinase-like_dom,pirsf_Protein_kinase_C_a/b/g	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,pfam_C2_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pirsf_Protein_kinase_C_a/b/g,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_DAG/PE-bd,prints_C2_dom	-	no_errors	PRKCB	HGNC	ENSG00000166501	tier1	-	-	80	0	0.00	67	8	10.67
PRMT8	0	genome.wustl.edu	37	12	3661874	3661874	+	RNA	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	3661874	3661874	C	T	SNP	PRMT8	ENST00000261252	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	PRMT8	HGNC	ENSG00000111218	tier1	-	-	58	0	0.00	69	5	6.76
PRPH	0	genome.wustl.edu	37	12	49689244	49689244	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	49689244	49689244	C	G	SNP	PRPH	ENST00000257860	human	ensembl	74_37	+1	known	missense	c.261	p.N87K	1.000	pfam_Intermed_filament_DNA-bd	pfam_IF,pfam_Intermed_filament_DNA-bd,prints_Keratin_I	-	no_errors	PRPH	HGNC	ENSG00000135406				26	0	0.00	43	4	8.51
PRR16	0	genome.wustl.edu	37	5	120022148	120022148	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	5	120022148	120022148	G	T	SNP	PRR16	ENST00000407149	human	ensembl	74_37	+1	known	missense	c.659	p.C220F	1.000	NULL	NULL	-	no_errors	PRR16	HGNC	ENSG00000184838	tier1	-	-	59	0	0.00	43	4	8.51
PSMA1	0	genome.wustl.edu	37	11	14632583	14632583	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	14632583	14632583	G	T	SNP	PSMA1	ENST00000528018	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.245	-	-	-	no_errors	PSMA1	HGNC	ENSG00000129084	tier1	-	-	62	0	0.00	65	6	8.45
PSMA4	0	genome.wustl.edu	37	15	78834886	78834886	+	Silent	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	15	78834886	78834886	A	T	SNP	PSMA4	ENST00000044462	human	ensembl	74_37	+1	known	silent	c.108	p.G36	0.981	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,pfam_Proteasome_asu_N,smart_Proteasome_asu_N	-	no_errors	PSMA4	HGNC	ENSG00000041357				86	0	0.00	108	7	6.09
PTCHD2	0	genome.wustl.edu	37	1	11576105	11576105	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	11576105	11576105	C	A	SNP	PTCHD2	ENST00000294484	human	ensembl	74_37	+1	known	missense	c.1636	p.H546N	1.000	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	-	no_errors	PTCHD2	HGNC	ENSG00000204624	tier1	-	-	73	0	0.00	65	7	9.72
PTGIR	0	genome.wustl.edu	37	19	47124858	47124858	+	Silent	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	47124858	47124858	G	A	SNP	PTGIR	ENST00000291294	human	ensembl	74_37	-1	known	silent	c.840	p.F280	0.954	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Prostglndn_IP_rcpt,prints_Prostanoid_rcpt,prints_Thbox_rcpt	-	no_errors	PTGIR	HGNC	ENSG00000160013	tier1	-	-	59	0	0.00	83	5	5.68
PTPRB	0	genome.wustl.edu	37	12	70986244	70986244	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	70986244	70986244	C	T	SNP	PTPRB	ENST00000334414	human	ensembl	74_37	-1	known	missense	c.1598	p.G533E	0.997	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Ricin_B_lectin,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRB	HGNC	ENSG00000127329	tier1	-	-	30	0	0.00	55	5	8.33
PVRL1	0	genome.wustl.edu	37	11	119535678	119535680	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	119535678	119535680	CCT	-	DEL	PVRL1	ENST00000264025	human	ensembl	74_37	-1	known	in_frame_del	c.1333_1331	p.E444in_frame_del	0.989:0.994:0.997	NULL	pfam_CD80_C2-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	PVRL1	HGNC	ENSG00000110400	tier1			40	0	0.00	41	4	8.89
PXDNL	0	genome.wustl.edu	37	8	52321611	52321611	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	8	52321611	52321611	G	T	SNP	PXDNL	ENST00000356297	human	ensembl	74_37	-1	known	missense	c.2573	p.P858H	0.607	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDNL	HGNC	ENSG00000147485	tier1	-	-	27	0	0.00	44	8	15.38
R3HDM2	0	genome.wustl.edu	37	12	57686359	57686359	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	57686359	57686359	C	G	SNP	R3HDM2	ENST00000402412	human	ensembl	74_37	-1	novel	missense	c.902	p.R301P	1.000	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	R3HDM2	HGNC	ENSG00000179912	tier1	-	-	102	0	0.00	107	8	6.96
RABGAP1L	0	genome.wustl.edu	37	1	174517040	174517040	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	174517040	174517040	G	T	SNP	RABGAP1L	ENST00000357444	human	ensembl	74_37	+1	known	missense	c.1665	p.M555I	0.048	superfamily_Rab-GTPase-TBC_dom	pfam_Kinesin-like,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	-	no_errors	RABGAP1L	HGNC	ENSG00000152061	tier1	-	-	90	0	0.00	87	7	7.45
RAD18	0	genome.wustl.edu	37	3	8983397	8983397	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	8983397	8983397	C	A	SNP	RAD18	ENST00000264926	human	ensembl	74_37	-1	known	missense	c.358	p.V120L	0.000	NULL	pfam_SAP_dom,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_Rad18_put,smart_SAP_dom,pfscan_Znf_RING,pfscan_SAP_dom	-	no_errors	RAD18	HGNC	ENSG00000070950				54	0	0.00	60	4	6.25
RAD54B	0	genome.wustl.edu	37	8	95412652	95412652	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	8	95412652	95412652	C	T	SNP	RAD54B	ENST00000336148	human	ensembl	74_37	-1	known	missense	c.984	p.M328I	1.000	pfam_SNF2_N,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_HDA_complex_subunit-2/3,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	RAD54B	HGNC	ENSG00000197275	tier1	-	-	76	0	0.00	77	8	9.41
RANBP3	0	genome.wustl.edu	37	19	5941834	5941834	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	5941834	5941834	C	A	SNP	RANBP3	ENST00000340578	human	ensembl	74_37	-1	known	missense	c.295	p.G99C	0.993	NULL	pfam_Ran_bind_dom,smart_Ran_bind_dom,pfscan_Ran_bind_dom	-	no_errors	RANBP3	HGNC	ENSG00000031823	tier1	-	-	36	0	0.00	39	6	13.33
RAPH1	0	genome.wustl.edu	37	2	204304271	204304271	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	204304271	204304271	C	T	SNP	RAPH1	ENST00000374493	human	ensembl	74_37	-1	known	silent	c.3798	p.Q1266	1.000	NULL	pfam_Ras-assoc,pfam_Pleckstrin_homology,superfamily_Kinase-like_dom,smart_Ras-assoc,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,prints_Paxillin	-	no_errors	RAPH1	HGNC	ENSG00000173166				51	0	0.00	75	4	5.06
RASGRP4	0	genome.wustl.edu	37	19	38905515	38905515	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	38905515	38905515	G	T	SNP	RASGRP4	ENST00000587738	human	ensembl	74_37	-1	known	silent	c.1203	p.A401	1.000	superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_RasGRF_CDC25,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Ras_GEF_dom,smart_RasGRF_CDC25,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_DAG/PE-bd	-	no_errors	RASGRP4	HGNC	ENSG00000171777	tier1	-	-	90	0	0.00	81	9	10.00
RBMX2	0	genome.wustl.edu	37	X	129545421	129545421	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	129545421	129545421	G	T	SNP	RBMX2	ENST00000305536	human	ensembl	74_37	+1	known	missense	c.403	p.G135C	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBMX2	HGNC	ENSG00000134597	tier1	-	-	96	0	0.00	90	7	7.22
RBPJL	0	genome.wustl.edu	37	20	43942722	43942722	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	43942722	43942722	G	T	SNP	RBPJL	ENST00000343694	human	ensembl	74_37	+1	known	missense	c.805	p.V269F	1.000	pfam_Beta-trefoil_DNA-bd_dom,superfamily_Beta-trefoil_DNA-bd_dom	pfam_Beta-trefoil_DNA-bd_dom,pfam_LAG1_DNA-bd,superfamily_Beta-trefoil_DNA-bd_dom,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set	-	no_errors	RBPJL	HGNC	ENSG00000124232				57	0	0.00	64	6	8.57
REL	0	genome.wustl.edu	37	2	61118917	61118917	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	61118917	61118917	G	T	SNP	REL	ENST00000295025	human	ensembl	74_37	+1	known	missense	c.110	p.G37V	1.000	pfam_RHD,superfamily_p53-like_TF_DNA-bd,pfscan_RHD	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	REL	HGNC	ENSG00000162924	tier1	-	-	80	0	0.00	112	8	6.67
RELN	0	genome.wustl.edu	37	7	103292142	103292142	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	103292142	103292142	G	T	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	missense	c.1858	p.H620N	1.000	superfamily_Sialidases	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056	tier1	-	-	62	0	0.00	76	11	12.64
RFC3	0	genome.wustl.edu	37	13	34410426	34410426	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	13	34410426	34410426	G	T	SNP	RFC3	ENST00000380071	human	ensembl	74_37	+1	known	missense	c.1065	p.M355I	1.000	NULL	pfam_ATPase_AAA_core,superfamily_P-loop_NTPase,superfamily_DNA_pol3_clamp-load_cplx_C,smart_AAA+_ATPase	-	no_errors	RFC3	HGNC	ENSG00000133119	tier1	-	-	54	0	0.00	75	6	7.41
RNF111	0	genome.wustl.edu	37	15	59373269	59373269	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	15	59373269	59373269	C	T	SNP	RNF111	ENST00000434298	human	ensembl	74_37	+1	known	nonsense	c.2083	p.Q695*	0.239	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF111	HGNC	ENSG00000157450	tier1	-	-	127	0	0.00	121	10	7.63
RNPC3	0	genome.wustl.edu	37	1	104076467	104076467	+	Frame_Shift_Del	DEL	A	A	-			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	104076467	104076467	A	-	DEL	RNPC3	ENST00000423855	human	ensembl	74_37	+1	known	frame_shift_del	c.347	p.K119fs	0.784	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RNPC3	HGNC	ENSG00000185946	tier1			40	0	0.00	46	6	11.54
ROR2	0	genome.wustl.edu	37	9	94486219	94486219	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	94486219	94486219	G	T	SNP	ROR2	ENST00000375708	human	ensembl	74_37	-1	known	missense	c.2557	p.P853T	0.014	pirsf_Tyr_kinase_rcpt_ROR	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	ROR2	HGNC	ENSG00000169071	tier1	-	-	48	0	0.00	64	12	15.79
RPGR	0	genome.wustl.edu	37	X	38178137	38178137	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	38178137	38178137	G	T	SNP	RPGR	ENST00000378505	human	ensembl	74_37	-1	known	silent	c.414	p.S138	0.000	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	RPGR	HGNC	ENSG00000156313	tier1	-	-	84	0	0.00	89	5	5.32
RPH3A	0	genome.wustl.edu	37	12	113312942	113312942	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	113312942	113312942	C	T	SNP	RPH3A	ENST00000389385	human	ensembl	74_37	+1	known	nonsense	c.850	p.Q284*	0.999	NULL	pfam_C2_dom,pfam_Znf_FYVE-typ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel,prints_Synaptotagmin,prints_C2_dom	-	no_errors	RPH3A	HGNC	ENSG00000089169	tier1	-	-	58	0	0.00	59	4	6.35
RPL10	0	genome.wustl.edu	37	X	153626899	153626899	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	153626899	153626899	G	T	SNP	RPL10	ENST00000479366	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RPL10	HGNC	ENSG00000147403	tier1	-	-	56	0	0.00	35	5	12.50
RPL12P38	0	genome.wustl.edu	37	17	58512743	58512743	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	58512743	58512743	G	T	SNP	RPL12P38	ENST00000588627	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.775	-	-	-	no_errors	RPL12P38	HGNC	ENSG00000213228	tier1	-	-	65	0	0.00	74	8	9.76
RPSAP52	0	genome.wustl.edu	37	12	66152024	66152024	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	66152024	66152024	C	A	SNP	RPSAP52	ENST00000489520	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RPSAP52	HGNC	ENSG00000241749				71	0	0.00	67	4	5.63
RRP9	0	genome.wustl.edu	37	3	51969420	51969420	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	51969420	51969420	C	A	SNP	RRP9	ENST00000232888	human	ensembl	74_37	-1	known	silent	c.909	p.R303	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	RRP9	HGNC	ENSG00000114767	tier1	-	-	43	0	0.00	48	5	9.43
RTEL1	0	genome.wustl.edu	37	20	62309668	62309668	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	62309668	62309668	G	C	SNP	RTEL1	ENST00000318100	human	ensembl	74_37	+1	known	missense	c.1006	p.G336R	0.801	superfamily_P-loop_NTPase	pfam_DEAD_2,superfamily_P-loop_NTPase,smart_Helicase-like_DEXD_c2,smart_ATP-dep_Helicase_C,pfscan_Helic_SF1/SF2_ATP-bd_DinG/Rad3,tigrfam_DNA_helicase_DNA-repair_Rad3	-	no_errors	RTEL1	HGNC	ENSG00000258366	tier1	-	-	52	0	0.00	65	9	12.16
RUNX1T1	0	genome.wustl.edu	37	8	92972711	92972711	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	8	92972711	92972711	G	A	SNP	RUNX1T1	ENST00000436581	human	ensembl	74_37	-1	known	missense	c.1607	p.T536I	1.000	pfam_Znf_MYND,pfscan_Znf_MYND	pfam_NHR2,pfam_TAFH_NHR1,pfam_Znf_MYND,smart_TAFH_NHR1,pfscan_TAFH_NHR1,pfscan_Znf_MYND,prints_ETO,prints_MTG8	-	no_errors	RUNX1T1	HGNC	ENSG00000079102	tier1	-	-	53	0	0.00	60	17	22.08
RYR2	0	genome.wustl.edu	37	1	237666780	237666780	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	237666780	237666780	C	A	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	missense	c.2582	p.T861K	0.997	pfam_Ryanodine_rcpt	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	46	0	0.00	73	5	6.41
S100A3	0	genome.wustl.edu	37	1	153520323	153520323	+	Splice_Site	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	153520323	153520323	C	T	SNP	S100A3	ENST00000368712	human	ensembl	74_37	-1	known	splice_site	c.142-1	e2-1	0.759	-	-	-	no_errors	S100A3	HGNC	ENSG00000188015				57	0	0.00	41	7	14.58
S100A4	0	genome.wustl.edu	37	1	153516390	153516390	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	153516390	153516390	C	G	SNP	S100A4	ENST00000354332	human	ensembl	74_37	-1	known	missense	c.151	p.D51H	0.995	pfscan_EF_hand_dom	pfam_S100_Ca-bd_sub,smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	S100A4	HGNC	ENSG00000196154	tier1	-	-	78	0	0.00	77	16	17.02
SALL2	0	genome.wustl.edu	37	14	21993201	21993201	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	21993201	21993201	C	T	SNP	SALL2	ENST00000327430	human	ensembl	74_37	-1	known	missense	c.661	p.A221T	0.999	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SALL2	HGNC	ENSG00000165821	tier1	-	-	55	0	0.00	65	5	7.04
SAMD7	0	genome.wustl.edu	37	3	169639075	169639075	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	169639075	169639075	G	T	SNP	SAMD7	ENST00000335556	human	ensembl	74_37	+1	known	missense	c.160	p.V54F	0.358	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	-	no_errors	SAMD7	HGNC	ENSG00000187033	tier1	-	-	77	0	0.00	94	22	18.97
SAMD9	0	genome.wustl.edu	37	7	92733886	92733886	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	92733886	92733886	C	A	SNP	SAMD9	ENST00000379958	human	ensembl	74_37	-1	known	missense	c.1525	p.D509Y	0.998	NULL	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,superfamily_P-loop_NTPase,smart_SAM,pfscan_SAM	-	no_errors	SAMD9	HGNC	ENSG00000205413	tier1	-	-	56	0	0.00	78	7	8.24
SCAF4	0	genome.wustl.edu	37	21	33060625	33060625	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	21	33060625	33060625	G	C	SNP	SCAF4	ENST00000286835	human	ensembl	74_37	-1	known	missense	c.2038	p.P680A	1.000	NULL	pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_CID_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SCAF4	HGNC	ENSG00000156304	tier1	-	-	132	0	0.00	122	9	6.87
SCAF8	0	genome.wustl.edu	37	6	155141311	155141311	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	155141311	155141311	A	T	SNP	SCAF8	ENST00000367186	human	ensembl	74_37	+1	known	missense	c.1834	p.I612F	1.000	smart_RRM_dom,pfscan_RRM_dom	pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_CID_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SCAF8	HGNC	ENSG00000213079	tier1	-	-	83	0	0.00	121	8	6.20
SCN1A	0	genome.wustl.edu	37	2	166847874	166847874	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	166847874	166847874	C	A	SNP	SCN1A	ENST00000303395	human	ensembl	74_37	-1	known	nonsense	c.5911	p.E1971*	1.000	prints_Na_channel_a1su	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a1su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN1A	HGNC	ENSG00000144285	tier1	-	-	81	0	0.00	75	8	9.64
SCN1A	0	genome.wustl.edu	37	2	166848261	166848261	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	166848261	166848261	G	C	SNP	SCN1A	ENST00000303395	human	ensembl	74_37	-1	known	missense	c.5524	p.P1842A	1.000	NULL	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a1su,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN1A	HGNC	ENSG00000144285				61	0	0.00	68	4	5.56
SCN3A	0	genome.wustl.edu	37	2	165984514	165984514	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	165984514	165984514	G	A	SNP	SCN3A	ENST00000283254	human	ensembl	74_37	-1	known	missense	c.3020	p.A1007V	1.000	pfam_Na_trans_assoc	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN3A	HGNC	ENSG00000153253				47	0	0.00	64	4	5.88
SCP2D1	0	genome.wustl.edu	37	20	18794792	18794792	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	18794792	18794792	G	T	SNP	SCP2D1	ENST00000377428	human	ensembl	74_37	+1	known	silent	c.333	p.P111	0.065	pfam_SCP2_sterol-bd_dom,superfamily_SCP2_sterol-bd_dom	pfam_SCP2_sterol-bd_dom,superfamily_SCP2_sterol-bd_dom	-	no_errors	SCP2D1	HGNC	ENSG00000132631	tier1	-	-	56	0	0.00	79	7	8.05
SDHB	0	genome.wustl.edu	37	1	17349305	17349305	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	17349305	17349305	G	T	SNP	SDHB	ENST00000485092	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	SDHB	HGNC	ENSG00000117118	tier1	-	-	31	0	0.00	17	4	19.05
SDK2	0	genome.wustl.edu	37	17	71437045	71437045	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	71437045	71437045	C	A	SNP	SDK2	ENST00000392650	human	ensembl	74_37	-1	known	missense	c.631	p.D211Y	1.000	NULL	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	SDK2	HGNC	ENSG00000069188	tier1	-	-	52	0	0.00	53	6	10.00
SEC24B	0	genome.wustl.edu	37	4	110446037	110446037	+	Nonsense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	110446037	110446037	C	T	SNP	SEC24B	ENST00000265175	human	ensembl	74_37	+1	known	nonsense	c.2572	p.Q858*	1.000	pfam_Sec23/24_trunk_dom	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24B	HGNC	ENSG00000138802				50	0	0.00	63	4	5.97
SEC24D	0	genome.wustl.edu	37	4	119754883	119754883	+	RNA	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	119754883	119754883	C	G	SNP	SEC24D	ENST00000505280	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	SEC24D	HGNC	ENSG00000150961	tier1	-	-	58	0	0.00	69	12	14.81
SEMA6B	0	genome.wustl.edu	37	19	4552571	4552571	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	4552571	4552571	G	0	DEL	SEMA6B	ENST00000301293	human	ensembl	74_37	-1	known	frame_shift_del	c.852	p.F285fs	0.968	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,pfscan_Semap_dom	-	no_errors	SEMA6B	HGNC	ENSG00000167680				122	0	0.00	126	7	5.26
SERPINA13P	0	genome.wustl.edu	37	14	95107765	95107765	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	95107765	95107765	C	A	SNP	SERPINA13P	ENST00000469935	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SERPINA13P	HGNC	ENSG00000187483				24	0	0.00	45	6	11.76
SERPINA5	0	genome.wustl.edu	37	14	95058482	95058482	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	95058482	95058482	G	T	SNP	SERPINA5	ENST00000329597	human	ensembl	74_37	+1	known	missense	c.1127	p.R376L	0.000	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA5	HGNC	ENSG00000188488	tier1	-	-	48	0	0.00	58	4	6.45
SERPINE2	0	genome.wustl.edu	37	2	224866556	224866556	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	224866556	224866556	T	A	SNP	SERPINE2	ENST00000258405	human	ensembl	74_37	-1	known	missense	c.62	p.H21L	0.144	superfamily_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINE2	HGNC	ENSG00000135919	tier1	-	-	66	0	0.00	58	8	12.12
SFXN3	0	genome.wustl.edu	37	10	102799314	102799314	+	Missense_Mutation	SNP	A	A	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	102799314	102799314	A	C	SNP	SFXN3	ENST00000224807	human	ensembl	74_37	+1	known	missense	c.950	p.E317A	0.006	pfam_Mtc,tigrfam_Mtc	pfam_Mtc,tigrfam_Mtc	-	no_errors	SFXN3	HGNC	ENSG00000107819	tier1	-	-	71	0	0.00	68	6	8.11
SH3BP5L	0	genome.wustl.edu	37	1	249110698	249110698	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	249110698	249110698	C	A	SNP	SH3BP5L	ENST00000494837	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SH3BP5L	HGNC	ENSG00000175137	tier1	-	-	39	0	0.00	43	4	8.51
SHCBP1L	0	genome.wustl.edu	37	1	182872292	182872292	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	182872292	182872292	G	T	SNP	SHCBP1L	ENST00000367547	human	ensembl	74_37	-1	known	missense	c.1592	p.A531D	1.000	superfamily_Pectin_lyase_fold/virulence,smart_Carb-bd_sugar_hydrolysis-dom,smart_PbH1	superfamily_Pectin_lyase_fold/virulence,smart_Carb-bd_sugar_hydrolysis-dom,smart_PbH1	-	no_errors	SHCBP1L	HGNC	ENSG00000157060	tier1	-	-	49	0	0.00	70	4	5.26
SHPRH	0	genome.wustl.edu	37	6	146269407	146269407	+	Splice_Site	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	146269407	146269407	C	T	SNP	SHPRH	ENST00000367503	human	ensembl	74_37	-1	known	splice_site	c.1061+1	e4+1	1.000	-	-	-	no_errors	SHPRH	HGNC	ENSG00000146414	tier1	-	-	103	0	0.00	108	7	6.09
SIAH2	0	genome.wustl.edu	37	3	150460351	150460351	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	150460351	150460351	C	T	SNP	SIAH2	ENST00000312960	human	ensembl	74_37	-1	known	silent	c.552	p.V184	1.000	pfam_7-in-absentia-prot_TRAF-dom,superfamily_TRAF-like,pfscan_Znf_SIAH	pfam_7-in-absentia-prot_TRAF-dom,superfamily_TRAF-like,pfscan_Znf_RING,pfscan_Znf_SIAH	-	no_errors	SIAH2	HGNC	ENSG00000181788	tier1	-	-	76	0	0.00	101	9	8.18
SIN3B	0	genome.wustl.edu	37	19	16989100	16989100	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	16989100	16989100	G	A	SNP	SIN3B	ENST00000379803	human	ensembl	74_37	+1	known	missense	c.3157	p.D1053N	0.997	NULL	pfam_PAH,pfam_HDAC_interact,superfamily_PAH,smart_HDAC_interact	-	no_errors	SIN3B	HGNC	ENSG00000127511				48	0	0.00	43	4	8.51
SKIDA1	0	genome.wustl.edu	37	10	21805376	21805376	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	21805376	21805376	A	G	SNP	SKIDA1	ENST00000449193	human	ensembl	74_37	-1	known	missense	c.1376	p.V459A	1.000	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	SKIDA1	HGNC	ENSG00000180592	tier1	-	-	65	0	0.00	82	16	16.33
SLC13A2	0	genome.wustl.edu	37	17	26820661	26820661	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	26820661	26820661	C	A	SNP	SLC13A2	ENST00000444914	human	ensembl	74_37	+1	known	silent	c.1098	p.T366	0.000	pfam_Na/sul_symport	pfam_Na/sul_symport,pfam_Cit_transptr-like_dom	-	no_errors	SLC13A2	HGNC	ENSG00000007216	tier1	-	-	45	0	0.00	73	14	16.09
SLC17A3	0	genome.wustl.edu	37	6	25862543	25862543	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	25862543	25862543	G	T	SNP	SLC17A3	ENST00000397060	human	ensembl	74_37	-1	known	missense	c.221	p.S74Y	0.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A3	HGNC	ENSG00000124564				62	0	0.00	71	4	5.33
SLC22A18AS	0	genome.wustl.edu	37	11	2909808	2909808	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	2909808	2909808	C	T	SNP	SLC22A18AS	ENST00000533594	human	ensembl	74_37	-1	known	missense	c.364	p.A122T	0.004	NULL	NULL	-	no_errors	SLC22A18AS	HGNC	ENSG00000254827	tier1	-	-	38	0	0.00	44	6	12.00
SLC22A2	0	genome.wustl.edu	37	6	160664752	160664752	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	160664752	160664752	G	T	SNP	SLC22A2	ENST00000366953	human	ensembl	74_37	-1	known	nonsense	c.1131	p.Y377*	1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A2	HGNC	ENSG00000112499	tier1	-	-	52	0	0.00	69	17	19.77
SLC2A3	0	genome.wustl.edu	37	12	8077066	8077066	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	8077066	8077066	C	G	SNP	SLC2A3	ENST00000075120	human	ensembl	74_37	-1	known	missense	c.1008	p.M336I	0.024	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,prints_Glc_transpt_3,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A3	HGNC	ENSG00000059804				68	0	0.00	81	5	5.81
SLC2A3	0	genome.wustl.edu	37	12	8077078	8077078	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	8077078	8077078	C	T	SNP	SLC2A3	ENST00000075120	human	ensembl	74_37	-1	known	silent	c.996	p.R332	0.998	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,pfam_Folate_carrier,superfamily_MFS_dom_general_subst_transpt,prints_Sugar/inositol_transpt,prints_Glc_transpt_3,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A3	HGNC	ENSG00000059804				61	0	0.00	71	4	5.33
SLC2A6	0	genome.wustl.edu	37	9	136339163	136339163	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	136339163	136339163	G	T	SNP	SLC2A6	ENST00000371899	human	ensembl	74_37	-1	known	silent	c.975	p.S325	0.267	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Sugar/inositol_transpt	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,prints_Sugar/inositol_transpt,tigrfam_Sugar/inositol_transpt	-	no_errors	SLC2A6	HGNC	ENSG00000160326	tier1	-	-	91	0	0.00	79	11	12.22
SLC35C2	0	genome.wustl.edu	37	20	44979257	44979257	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	44979257	44979257	C	A	SNP	SLC35C2	ENST00000480329	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.019	-	-	-	no_errors	SLC35C2	HGNC	ENSG00000080189	tier1	-	-	35	0	0.00	33	4	10.81
SLC44A5	0	genome.wustl.edu	37	1	75708676	75708676	+	Silent	SNP	T	T	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	75708676	75708676	T	C	SNP	SLC44A5	ENST00000370855	human	ensembl	74_37	-1	known	silent	c.366	p.P122	1.000	NULL	pfam_Choline_transptr-like	-	no_errors	SLC44A5	HGNC	ENSG00000137968				43	0	0.00	49	3	5.77
SLC44A5	0	genome.wustl.edu	37	1	75708677	75708677	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	75708677	75708677	G	T	SNP	SLC44A5	ENST00000370855	human	ensembl	74_37	-1	known	missense	c.365	p.P122Q	1.000	NULL	pfam_Choline_transptr-like	-	no_errors	SLC44A5	HGNC	ENSG00000137968				43	0	0.00	47	3	6.00
SLC4A10	0	genome.wustl.edu	37	2	162480885	162480885	+	RNA	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	162480885	162480885	G	A	SNP	SLC4A10	ENST00000605990	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SLC4A10	HGNC	ENSG00000144290	tier1	-	-	85	0	0.00	93	8	7.92
SLC4A8	0	genome.wustl.edu	37	12	51865176	51865176	+	Nonsense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	51865176	51865176	C	G	SNP	SLC4A8	ENST00000453097	human	ensembl	74_37	+1	known	nonsense	c.1764	p.Y588*	1.000	pfam_HCO3_transpt_C,prints_HCO3_transpt_euk,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A8	HGNC	ENSG00000050438	tier1	-	-	98	0	0.00	114	11	8.80
SLC8A2	0	genome.wustl.edu	37	19	47969259	47969259	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	47969259	47969259	C	A	SNP	SLC8A2	ENST00000236877	human	ensembl	74_37	-1	known	missense	c.402	p.M134I	1.000	pfam_NaCa_Exmemb,tigrfam_Na_Ca_Ex	pfam_Calx_beta,pfam_NaCa_Exmemb,smart_Calx_beta,prints_Na_Ca_Ex,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A2	HGNC	ENSG00000118160				34	0	0.00	34	2	5.41
SLFN11	0	genome.wustl.edu	37	17	33690498	33690498	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	33690498	33690498	C	A	SNP	SLFN11	ENST00000308377	human	ensembl	74_37	-1	known	missense	c.329	p.W110L	0.995	NULL	pfam_ATPase_AAA-4,pfam_DUF2075,superfamily_P-loop_NTPase	-	no_errors	SLFN11	HGNC	ENSG00000172716	tier1	-	-	50	0	0.00	48	8	14.29
SLITRK4	0	genome.wustl.edu	37	X	142718475	142718475	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	142718475	142718475	G	T	SNP	SLITRK4	ENST00000338017	human	ensembl	74_37	-1	known	silent	c.450	p.A150	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK4	HGNC	ENSG00000179542	tier1	-	-	65	0	0.00	54	7	11.48
SLX4	0	genome.wustl.edu	37	16	3640930	3640930	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	3640930	3640930	C	A	SNP	SLX4	ENST00000294008	human	ensembl	74_37	-1	known	silent	c.2709	p.V903	0.001	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	-	no_errors	SLX4	HGNC	ENSG00000188827	tier1	-	-	89	0	0.00	97	13	11.82
SOWAHB	0	genome.wustl.edu	37	4	77816952	77816952	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	77816952	77816952	C	A	SNP	SOWAHB	ENST00000334306	human	ensembl	74_37	-1	known	missense	c.2051	p.G684V	0.012	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	SOWAHB	HGNC	ENSG00000186212				43	0	0.00	47	6	11.32
SPAG5-AS1	0	genome.wustl.edu	37	17	26925829	26925829	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	26925829	26925829	C	A	SNP	SPAG5-AS1	ENST00000414744	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	SPAG5-AS1	HGNC	ENSG00000227543	tier1	-	-	146	0	0.00	160	12	6.98
SPATA31D1	0	genome.wustl.edu	37	9	84609130	84609130	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	84609130	84609130	A	T	SNP	SPATA31D1	ENST00000344803	human	ensembl	74_37	+1	known	missense	c.3745	p.M1249L	0.000	NULL	NULL	-	no_errors	SPATA31D1	HGNC	ENSG00000214929	tier1	-	-	97	0	0.00	112	6	5.08
SPATA31D1	0	genome.wustl.edu	37	9	84610013	84610013	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	84610013	84610013	C	A	SNP	SPATA31D1	ENST00000344803	human	ensembl	74_37	+1	known	missense	c.4628	p.P1543Q	0.000	NULL	NULL	-	no_errors	SPATA31D1	HGNC	ENSG00000214929	tier1	-	-	75	0	0.00	67	10	12.99
SPESP1	0	genome.wustl.edu	37	15	69238242	69238242	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	15	69238242	69238242	G	T	SNP	SPESP1	ENST00000310673	human	ensembl	74_37	+1	known	silent	c.369	p.S123	0.007	NULL	NULL	-	no_errors	SPESP1	HGNC	ENSG00000258484				24	0	0.00	29	4	12.12
SPHKAP	0	genome.wustl.edu	37	2	228883671	228883671	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	228883671	228883671	G	T	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	nonsense	c.1899	p.Y633*	0.928	NULL	pfam_AKAP_110_C	-	no_errors	SPHKAP	HGNC	ENSG00000153820	tier1	-	-	53	0	0.00	50	5	9.09
SPTBN1	0	genome.wustl.edu	37	2	54880793	54880793	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	54880793	54880793	G	T	SNP	SPTBN1	ENST00000356805	human	ensembl	74_37	+1	known	silent	c.5625	p.A1875	0.001	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN1	HGNC	ENSG00000115306				64	0	0.00	74	4	5.13
SSH2	0	genome.wustl.edu	37	17	28003885	28003885	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	28003885	28003885	C	T	SNP	SSH2	ENST00000269033	human	ensembl	74_37	-1	known	silent	c.486	p.T162	0.918	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH2	HGNC	ENSG00000141298	tier1	-	-	26	0	0.00	58	9	13.43
SSPO	0	genome.wustl.edu	37	7	149500089	149500089	+	RNA	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	149500089	149500089	G	C	SNP	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1	-	-	27	0	0.00	29	5	14.71
SSPO	0	genome.wustl.edu	37	7	149500813	149500813	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	149500813	149500813	G	T	SNP	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.295	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1	-	-	106	0	0.00	119	8	6.30
SSPO	0	genome.wustl.edu	37	7	149511966	149511966	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	149511966	149511966	G	T	SNP	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1	-	-	34	0	0.00	48	6	11.11
ST3GAL2	0	genome.wustl.edu	37	16	70428966	70428966	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	70428966	70428966	C	G	SNP	ST3GAL2	ENST00000342907	human	ensembl	74_37	-1	known	missense	c.452	p.R151P	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST3GAL2	HGNC	ENSG00000157350	tier1	-	-	56	0	0.00	73	6	7.59
STAG3	0	genome.wustl.edu	37	7	99811735	99811735	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	99811735	99811735	C	A	SNP	STAG3	ENST00000440830	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	STAG3	HGNC	ENSG00000066923	tier1	-	-	36	0	0.00	43	7	14.00
STK32B	0	genome.wustl.edu	37	4	5448434	5448434	+	Silent	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	5448434	5448434	C	G	SNP	STK32B	ENST00000282908	human	ensembl	74_37	+1	known	silent	c.597	p.G199	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	STK32B	HGNC	ENSG00000152953	tier1	-	-	80	0	0.00	61	9	12.86
STOML3	0	genome.wustl.edu	37	13	39550710	39550710	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	13	39550710	39550710	C	A	SNP	STOML3	ENST00000379631	human	ensembl	74_37	-1	known	nonsense	c.196	p.G66*	1.000	pfam_Band_7,smart_Band_7,prints_Stomatin	pfam_Band_7,smart_Band_7,prints_Stomatin	-	no_errors	STOML3	HGNC	ENSG00000133115	tier1	-	-	107	0	0.00	105	24	18.60
SULF2	0	genome.wustl.edu	37	20	46313304	46313304	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	46313304	46313304	C	A	SNP	SULF2	ENST00000359930	human	ensembl	74_37	-1	known	silent	c.759	p.A253	0.961	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	pfam_Sulfatase,pfam_Extracellular_sulfatase_C,superfamily_Alkaline_phosphatase_core,pirsf_Extracellular_sulfatase	-	no_errors	SULF2	HGNC	ENSG00000196562	tier1	-	-	60	0	0.00	87	5	5.43
SVEP1	0	genome.wustl.edu	37	9	113308490	113308490	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	113308490	113308490	C	T	SNP	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	missense	c.869	p.R290Q	0.993	superfamily_Growth_fac_rcpt_N_dom	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124	tier1	-	-	80	0	0.00	68	19	21.84
SYNE1	0	genome.wustl.edu	37	6	152675824	152675824	+	Silent	SNP	T	T	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	152675824	152675824	T	C	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	silent	c.10896	p.A3632	0.097	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	-	no_errors	SYNE1	HGNC	ENSG00000131018	tier1	-	-	65	0	0.00	85	6	6.59
SYNJ1	0	genome.wustl.edu	37	21	34003657	34003657	+	Nonsense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	21	34003657	34003657	G	C	SNP	SYNJ1	ENST00000433931	human	ensembl	74_37	-1	known	nonsense	c.4487	p.S1496*	0.021	NULL	pfam_Syja_N,pfam_Endo/exonuclease/phosphatase,pfam_DUF1866,superfamily_Endo/exonuclease/phosphatase,smart_IPPc,pfscan_RRM_dom,pfscan_Syja_N	-	no_errors	SYNJ1	HGNC	ENSG00000159082	tier1	-	-	95	0	0.00	90	5	5.26
SYT9	0	genome.wustl.edu	37	11	7324558	7324558	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	7324558	7324558	A	T	SNP	SYT9	ENST00000318881	human	ensembl	74_37	+1	known	missense	c.434	p.Q145L	0.908	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom,prints_Synaptotagmin,prints_C2_dom	-	no_errors	SYT9	HGNC	ENSG00000170743	tier1	-	-	58	0	0.00	52	4	7.14
TAB1	0	genome.wustl.edu	37	22	39815583	39815583	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	22	39815583	39815583	C	T	SNP	TAB1	ENST00000216160	human	ensembl	74_37	+1	known	missense	c.724	p.R242W	1.000	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	pfam_PP2C-like_dom,superfamily_PP2C-like_dom,smart_PP2C-like_dom	-	no_errors	TAB1	HGNC	ENSG00000100324	tier1	-	-	82	0	0.00	69	8	10.39
TAPBPL	0	genome.wustl.edu	37	12	6571229	6571229	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	6571229	6571229	G	A	SNP	TAPBPL	ENST00000266556	human	ensembl	74_37	+1	known	missense	c.1321	p.E441K	0.000	NULL	pfam_Ig_C1-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	TAPBPL	HGNC	ENSG00000139192	tier1	-	-	60	0	0.00	57	7	10.94
TARBP1	0	genome.wustl.edu	37	1	234534271	234534271	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	234534271	234534271	G	A	SNP	TARBP1	ENST00000040877	human	ensembl	74_37	-1	novel	missense	c.4100	p.S1367L	0.757	NULL	pfam_SpoU_MeTrfase,superfamily_ARM-type_fold	-	no_errors	TARBP1	HGNC	ENSG00000059588	tier1	-	-	43	0	0.00	62	7	10.14
TARM1	0	genome.wustl.edu	37	19	54577262	54577262	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	54577262	54577262	C	T	SNP	TARM1	ENST00000432826	human	ensembl	74_37	-1	known	missense	c.568	p.D190N	0.007	smart_Ig_sub	smart_Ig_sub	-	no_errors	TARM1	HGNC	ENSG00000248385	tier1	-	-	77	0	0.00	62	8	11.43
TARSL2	0	genome.wustl.edu	37	15	102215856	102215856	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	15	102215856	102215856	T	C	SNP	TARSL2	ENST00000335968	human	ensembl	74_37	-1	known	missense	c.1735	p.T579A	1.000	pfam_aa-tRNA-synt_IIb_cons-dom,pfscan_aa-tRNA-synth_II,tigrfam_Thr-tRNA-ligase_IIa	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_TGS,pfam_tRNA_SAD,superfamily_Thr/Ala-tRNA-synth_IIc_edit,superfamily_Anticodon-bd,superfamily_TGS-like,smart_tRNA_SAD,pfscan_aa-tRNA-synth_II,prints_Thr-tRNA-ligase_IIa,tigrfam_Thr-tRNA-ligase_IIa	-	no_errors	TARSL2	HGNC	ENSG00000185418	tier1	-	-	86	0	0.00	105	8	7.08
TBC1D2	0	genome.wustl.edu	37	9	100975482	100975482	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	100975482	100975482	G	T	SNP	TBC1D2	ENST00000375066	human	ensembl	74_37	-1	known	silent	c.1393	p.R465	1.000	NULL	pfam_Rab-GTPase-TBC_dom,superfamily_Rab-GTPase-TBC_dom,smart_Pleckstrin_homology,smart_Rab-GTPase-TBC_dom,pfscan_Pleckstrin_homology,pfscan_Rab-GTPase-TBC_dom	-	no_errors	TBC1D2	HGNC	ENSG00000095383	tier1	-	-	81	0	0.00	68	4	5.56
TCL6	0	genome.wustl.edu	37	14	96134723	96134723	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	96134723	96134723	C	A	SNP	TCL6	ENST00000352367	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.018	-	-	-	no_errors	TCL6	HGNC	ENSG00000187621	tier1	-	-	27	0	0.00	36	5	12.20
TCP1	0	genome.wustl.edu	37	6	160206497	160206497	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	160206497	160206497	T	A	SNP	TCP1	ENST00000321394	human	ensembl	74_37	-1	known	missense	c.409	p.I137F	0.002	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,tigrfam_Chap_CCT_alpha	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_alpha	-	no_errors	TCP1	HGNC	ENSG00000120438	tier1	-	-	59	0	0.00	53	8	13.11
TDP1	0	genome.wustl.edu	37	14	90509479	90509479	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	90509479	90509479	C	T	SNP	TDP1	ENST00000335725	human	ensembl	74_37	+1	known	missense	c.1819	p.P607S	1.000	NULL	pfam_Tyr-DNA_phospho	-	no_errors	TDP1	HGNC	ENSG00000042088	tier1	-	-	51	0	0.00	67	14	17.28
TDP2	0	genome.wustl.edu	37	6	24666976	24666976	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	24666976	24666976	C	T	SNP	TDP2	ENST00000545995	human	ensembl	74_37	-1	known	missense	c.205	p.D69N	0.071	superfamily_UBA-like	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,superfamily_UBA-like	-	no_errors	TDP2	HGNC	ENSG00000111802	tier1	-	-	16	0	0.00	27	5	15.62
TET3	0	genome.wustl.edu	37	2	74275075	74275075	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	74275075	74275075	G	T	SNP	TET3	ENST00000409262	human	ensembl	74_37	+1	known	silent	c.1626	p.L542	1.000	NULL	NULL	-	no_errors	TET3	HGNC	ENSG00000187605	tier1	-	-	38	0	0.00	43	4	8.51
TG	0	genome.wustl.edu	37	8	134034380	134034380	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	8	134034380	134034380	G	C	SNP	TG	ENST00000220616	human	ensembl	74_37	+1	known	missense	c.7021	p.G2341R	1.000	pfam_CarbesteraseB,pirsf_Thyroglobulin	pfam_Thyroglobulin_1,pfam_CarbesteraseB,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Thyroglobulin_1,smart_Thyroglobulin_1,pirsf_Thyroglobulin,pfscan_Thyroglobulin_1	-	no_errors	TG	HGNC	ENSG00000042832	tier1	-	-	64	0	0.00	61	11	15.28
THSD1	0	genome.wustl.edu	37	13	52951643	52951643	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	13	52951643	52951643	T	A	SNP	THSD1	ENST00000258613	human	ensembl	74_37	-1	known	missense	c.2462	p.E821V	0.997	NULL	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD1	HGNC	ENSG00000136114				76	0	0.00	99	7	6.60
TIPRL	0	genome.wustl.edu	37	1	168154083	168154083	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	168154083	168154083	G	T	SNP	TIPRL	ENST00000367833	human	ensembl	74_37	+1	known	missense	c.351	p.K117N	1.000	pfam_TIP41-like	pfam_TIP41-like	-	no_errors	TIPRL	HGNC	ENSG00000143155	tier1	-	-	61	0	0.00	72	9	11.11
TM7SF3	0	genome.wustl.edu	37	12	27152716	27152717	+	RNA	INS	-	-	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	27152716	27152717	-	A	INS	TM7SF3	ENST00000539399	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	TM7SF3	HGNC	ENSG00000064115	tier1			18	0	0.00	24	4	14.29
TMC2	0	genome.wustl.edu	37	20	2605001	2605001	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	2605001	2605001	C	A	SNP	TMC2	ENST00000358864	human	ensembl	74_37	+1	known	silent	c.2265	p.L755	0.063	NULL	pfam_TMC	-	no_errors	TMC2	HGNC	ENSG00000149488	tier1	-	-	71	0	0.00	100	7	6.54
TMEM131	0	genome.wustl.edu	37	2	98435160	98435160	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	98435160	98435160	C	A	SNP	TMEM131	ENST00000186436	human	ensembl	74_37	-1	known	missense	c.1099	p.D367Y	1.000	NULL	pfam_DUF3651_TMEM131	-	no_errors	TMEM131	HGNC	ENSG00000075568	tier1	-	-	56	0	0.00	67	4	5.63
TMEM132C	0	genome.wustl.edu	37	12	129180377	129180377	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	129180377	129180377	C	A	SNP	TMEM132C	ENST00000435159	human	ensembl	74_37	+1	known	missense	c.1658	p.P553H	1.000	NULL	NULL	-	no_errors	TMEM132C	HGNC	ENSG00000181234	tier1	-	-	56	0	0.00	54	8	12.90
TMEM135	0	genome.wustl.edu	37	11	87030375	87030375	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	87030375	87030375	G	T	SNP	TMEM135	ENST00000305494	human	ensembl	74_37	+1	known	missense	c.1200	p.L400F	1.000	NULL	NULL	-	no_errors	TMEM135	HGNC	ENSG00000166575	tier1	-	-	91	0	0.00	122	10	7.58
TMEM176B	0	genome.wustl.edu	37	7	150490363	150490363	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	150490363	150490363	G	C	SNP	TMEM176B	ENST00000326442	human	ensembl	74_37	-1	known	missense	c.413	p.T138R	0.025	pfam_CD20-like,superfamily_MFS_dom_general_subst_transpt	pfam_CD20-like,superfamily_MFS_dom_general_subst_transpt	-	no_errors	TMEM176B	HGNC	ENSG00000106565	tier1	-	-	37	0	0.00	39	4	9.09
TMEM182	0	genome.wustl.edu	37	2	103431207	103431207	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	103431207	103431207	G	T	SNP	TMEM182	ENST00000412401	human	ensembl	74_37	+1	known	missense	c.470	p.G157V	1.000	NULL	NULL	-	no_errors	TMEM182	HGNC	ENSG00000170417	tier1	-	-	50	0	0.00	65	8	10.96
TMEM182	0	genome.wustl.edu	37	2	103378716	103378716	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	103378716	103378716	G	T	SNP	TMEM182	ENST00000412401	human	ensembl	74_37	+1	known	missense	c.40	p.G14C	1.000	NULL	NULL	-	no_errors	TMEM182	HGNC	ENSG00000170417				65	0	0.00	93	5	5.10
TMEM215	0	genome.wustl.edu	37	9	32784186	32784186	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	32784186	32784186	G	T	SNP	TMEM215	ENST00000342743	human	ensembl	74_37	+1	known	missense	c.5	p.R2L	1.000	NULL	NULL	-	no_errors	TMEM215	HGNC	ENSG00000188133	tier1	-	-	56	0	0.00	66	6	8.33
TMEM234	0	genome.wustl.edu	37	1	32682383	32682383	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	32682383	32682383	C	A	SNP	TMEM234	ENST00000485689	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	TMEM234	HGNC	ENSG00000160055	tier1	-	-	22	0	0.00	27	4	12.90
TNNT3	0	genome.wustl.edu	37	11	1955826	1955826	+	Silent	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	1955826	1955826	G	A	SNP	TNNT3	ENST00000397301	human	ensembl	74_37	+1	known	silent	c.564	p.K188	1.000	pfam_Troponin	pfam_Troponin	-	no_errors	TNNT3	HGNC	ENSG00000130595				41	0	0.00	37	3	7.32
TP53	0	genome.wustl.edu	37	17	7579312	7579312	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	7579312	7579312	C	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	silent	c.375	p.T125	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs55863639	-	118	0	0.00	90	5	5.26
TP53	0	genome.wustl.edu	37	17	7577058	7577058	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	7577058	7577058	C	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	nonsense	c.880	p.E294*	0.015	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				64	0	0.00	69	6	8.00
TP53BP2	0	genome.wustl.edu	37	1	224001971	224001971	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	224001971	224001971	C	A	SNP	TP53BP2	ENST00000343537	human	ensembl	74_37	-1	known	missense	c.260	p.R87L	1.000	NULL	pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	TP53BP2	HGNC	ENSG00000143514	tier1	-	-	79	0	0.00	66	7	9.59
TP53TG3D	0	genome.wustl.edu	37	16	32266406	32266406	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	32266406	32266406	G	T	SNP	TP53TG3D	ENST00000564810	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.279	-	-	-	no_errors	TP53TG3D	HGNC	ENSG00000205456	tier1	-	-	141	0	0.00	158	9	5.39
TP73	0	genome.wustl.edu	37	1	3644716	3644716	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	3644716	3644716	G	T	SNP	TP73	ENST00000378295	human	ensembl	74_37	+1	known	missense	c.1009	p.V337F	0.006	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_SAM_2,superfamily_p53-like_TF_DNA-bd,superfamily_SAM/pointed,superfamily_p53_tetrameristn,smart_SAM,prints_p53_tumour_suppressor	-	no_errors	TP73	HGNC	ENSG00000078900	tier1	-	-	198	0	0.00	187	12	6.03
TPD52L1	0	genome.wustl.edu	37	6	125574899	125574899	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	125574899	125574899	G	T	SNP	TPD52L1	ENST00000534000	human	ensembl	74_37	+1	known	missense	c.423	p.M141I	1.000	pfam_TPD52	pfam_TPD52	-	no_errors	TPD52L1	HGNC	ENSG00000111907	tier1	-	-	54	0	0.00	67	4	5.63
TPSAB1	0	genome.wustl.edu	37	16	1291473	1291473	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	1291473	1291473	G	T	SNP	TPSAB1	ENST00000338844	human	ensembl	74_37	+1	known	missense	c.272	p.R91L	0.005	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TPSAB1	HGNC	ENSG00000172236				53	0	0.00	62	6	8.82
TRHDE	0	genome.wustl.edu	37	12	72866848	72866848	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	72866848	72866848	G	T	SNP	TRHDE	ENST00000261180	human	ensembl	74_37	+1	known	missense	c.1337	p.W446L	1.000	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	TRHDE	HGNC	ENSG00000072657	tier1	-	-	82	0	0.00	92	10	9.80
TRIM24	0	genome.wustl.edu	37	7	138255646	138255646	+	Silent	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	138255646	138255646	G	C	SNP	TRIM24	ENST00000343526	human	ensembl	74_37	+1	known	silent	c.1776	p.T592	0.999	NULL	pfam_Bromodomain,pfam_Znf_B-box,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_B-box,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	TRIM24	HGNC	ENSG00000122779	tier1	-	-	165	0	0.00	209	19	8.30
TRIM3	0	genome.wustl.edu	37	11	6477889	6477889	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	6477889	6477889	C	G	SNP	TRIM3	ENST00000345851	human	ensembl	74_37	-1	known	missense	c.1067	p.R356P	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_NHL_repeat,pfam_Filamin/ABP280_repeat-like,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_Ig_E-set,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Filamin,pfscan_Filamin/ABP280_repeat-like,pfscan_NHL_repeat_subgr,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM3	HGNC	ENSG00000110171	tier1	-	-	45	0	0.00	47	11	18.97
TRIM69	0	genome.wustl.edu	37	15	45047271	45047271	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	15	45047271	45047271	C	T	SNP	TRIM69	ENST00000329464	human	ensembl	74_37	+1	known	silent	c.180	p.F60	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_PRY,smart_SPla/RYanodine_receptor_subgr,prints_Butyrophylin,pfscan_B30.2/SPRY,pfscan_Znf_RING	-	no_errors	TRIM69	HGNC	ENSG00000185880	tier1	-	-	51	0	0.00	73	4	5.19
TRIP11	0	genome.wustl.edu	37	14	92470434	92470434	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	92470434	92470434	C	G	SNP	TRIP11	ENST00000267622	human	ensembl	74_37	-1	known	missense	c.3886	p.G1296R	1.000	NULL	superfamily_Ribosomal_L29,pfscan_GRIP	-	no_errors	TRIP11	HGNC	ENSG00000100815	tier1	-	-	53	0	0.00	73	10	12.05
TRPC4	0	genome.wustl.edu	37	13	38357272	38357272	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	13	38357272	38357272	C	T	SNP	TRPC4	ENST00000379681	human	ensembl	74_37	-1	known	missense	c.199	p.D67N	1.000	superfamily_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	pfam_Ion_trans_dom,pfam_TRP_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC4_channel,prints_TRPC_channel,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	-	no_errors	TRPC4	HGNC	ENSG00000133107	tier1	-	-	65	0	0.00	57	6	9.52
TRPM3	0	genome.wustl.edu	37	9	73477993	73477993	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	73477993	73477993	C	A	SNP	TRPM3	ENST00000423814	human	ensembl	74_37	-1	known	missense	c.299	p.G100V	1.000	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM3	HGNC	ENSG00000083067	tier1	-	-	52	0	0.00	57	15	20.83
TRPM6	0	genome.wustl.edu	37	9	77377185	77377185	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	77377185	77377185	T	C	SNP	TRPM6	ENST00000451710	human	ensembl	74_37	-1	known	missense	c.4402	p.I1468V	0.005	NULL	pfam_MHCK_EF2_kinase,pfam_Ion_trans_dom,superfamily_Kinase-like_dom,smart_MHCK_EF2_kinase,pfscan_MHCK_EF2_kinase	-	no_errors	TRPM6	HGNC	ENSG00000119121				53	0	0.00	67	4	5.63
TRRAP	0	genome.wustl.edu	37	7	98608682	98608682	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	98608682	98608682	G	A	SNP	TRRAP	ENST00000359863	human	ensembl	74_37	+1	known	missense	c.10904	p.R3635H	0.995	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	TRRAP	HGNC	ENSG00000196367	tier1	-	-	25	0	0.00	14	4	22.22
TSHZ2	0	genome.wustl.edu	37	20	51872528	51872528	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	51872528	51872528	G	T	SNP	TSHZ2	ENST00000371497	human	ensembl	74_37	+1	known	missense	c.2531	p.R844L	1.000	superfamily_Homeodomain-like,smart_Homeobox_dom	superfamily_Homeodomain-like,smart_Znf_C2H2-like,smart_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	TSHZ2	HGNC	ENSG00000182463	tier1	-	-	67	0	0.00	59	10	14.49
TSR2	0	genome.wustl.edu	37	X	54467182	54467182	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	X	54467182	54467182	G	T	SNP	TSR2	ENST00000375151	human	ensembl	74_37	+1	known	silent	c.141	p.G47	1.000	pfam_Pre-rRNA_process_TSR2	pfam_Pre-rRNA_process_TSR2	-	no_errors	TSR2	HGNC	ENSG00000158526	tier1	-	-	183	0	0.00	210	13	5.83
TSSC1	0	genome.wustl.edu	37	2	3193279	3193279	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	3193279	3193279	C	A	SNP	TSSC1	ENST00000382125	human	ensembl	74_37	-1	known	missense	c.990	p.K330N	1.000	NULL	pfam_WD40_repeat,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	TSSC1	HGNC	ENSG00000032389	tier1	-	-	61	0	0.00	38	15	28.30
TTC24	0	genome.wustl.edu	37	1	156554758	156554758	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	156554758	156554758	C	A	SNP	TTC24	ENST00000368236	human	ensembl	74_37	+1	known	silent	c.1341	p.V447	0.000	NULL	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC24	HGNC	ENSG00000187862	tier1	-	-	51	0	0.00	38	6	13.64
TTC40	0	genome.wustl.edu	37	10	134623983	134623983	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	134623983	134623983	G	T	SNP	TTC40	ENST00000263170	human	ensembl	74_37	-1	known	missense	c.2077	p.R693S	0.000	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811	tier1	-	-	55	0	0.00	81	6	6.82
TTC40	0	genome.wustl.edu	37	10	134682826	134682826	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	134682826	134682826	T	A	SNP	TTC40	ENST00000368586	human	ensembl	74_37	-1	putative	missense	c.4562	p.H1521L	0.956	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811	tier1	-	-	32	0	0.00	36	4	10.00
TTC40	0	genome.wustl.edu	37	10	134694436	134694436	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	134694436	134694436	C	G	SNP	TTC40	ENST00000368582	human	ensembl	74_37	-1	known	missense	c.3728	p.R1243P	0.000	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811	tier1	-	-	47	0	0.00	53	5	8.47
TTC7A	0	genome.wustl.edu	37	2	47185691	47185691	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	47185691	47185691	G	T	SNP	TTC7A	ENST00000461601	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TTC7A	HGNC	ENSG00000068724	tier1	-	-	51	0	0.00	55	4	6.78
TTLL9	0	genome.wustl.edu	37	20	30497560	30497560	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	30497560	30497560	G	T	SNP	TTLL9	ENST00000375938	human	ensembl	74_37	+1	known	missense	c.339	p.M113I	1.000	pfam_TTL/TTLL_fam	pfam_TTL/TTLL_fam	-	no_errors	TTLL9	HGNC	ENSG00000131044	tier1	-	-	51	0	0.00	47	4	7.84
TTN	0	genome.wustl.edu	37	2	179479481	179479481	+	Splice_Site	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	179479481	179479481	C	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	splice_site	c.41057-1	e209-1	1.000	-	-	-	no_errors	TTN	HGNC	ENSG00000155657				29	0	0.00	52	3	5.45
TTN	0	genome.wustl.edu	37	2	179614278	179614278	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	179614278	179614278	C	A	SNP	TTN	ENST00000360870	human	ensembl	74_37	-1	known	missense	c.12849	p.R4283S	0.118	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Titin_Z,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				71	0	0.00	85	5	5.56
TTYH3	0	genome.wustl.edu	37	7	2687177	2687177	+	Silent	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	2687177	2687177	G	C	SNP	TTYH3	ENST00000258796	human	ensembl	74_37	+1	known	silent	c.531	p.T177	0.000	pfam_Tweety	pfam_Tweety	-	no_errors	TTYH3	HGNC	ENSG00000136295				60	0	0.00	46	5	9.80
TUBA3D	0	genome.wustl.edu	37	2	132235781	132235781	+	Silent	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	132235781	132235781	C	T	SNP	TUBA3D	ENST00000321253	human	ensembl	74_37	+1	known	silent	c.48	p.I16	0.998	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,prints_Tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Alpha_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Beta_tubulin	-	no_errors	TUBA3D	HGNC	ENSG00000075886	tier1	-	-	134	0	0.00	151	12	7.36
TVP23A	0	genome.wustl.edu	37	16	10864159	10864159	+	Silent	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	10864159	10864159	G	C	SNP	TVP23A	ENST00000299866	human	ensembl	74_37	-1	known	silent	c.612	p.G204	0.008	NULL	pfam_DUF846_euk	-	no_errors	TVP23A	HGNC	ENSG00000166676	tier1	-	-	40	0	0.00	50	13	20.63
TXLNB	0	genome.wustl.edu	37	6	139564250	139564250	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	139564250	139564250	C	T	SNP	TXLNB	ENST00000358430	human	ensembl	74_37	-1	known	missense	c.1468	p.A490T	0.000	NULL	pfam_Taxilin_fam	-	no_errors	TXLNB	HGNC	ENSG00000164440	tier1	-	-	80	0	0.00	87	11	11.22
TYK2	0	genome.wustl.edu	37	19	10463209	10463209	+	Silent	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	10463209	10463209	C	G	SNP	TYK2	ENST00000264818	human	ensembl	74_37	-1	known	silent	c.3219	p.L1073	0.998	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,pfscan_Prot_kinase_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_Tyr_kinase_non-rcpt_TYK2_N	-	no_errors	TYK2	HGNC	ENSG00000105397	tier1	-	-	52	0	0.00	81	7	7.95
TYK2	0	genome.wustl.edu	37	19	10461829	10461829	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	10461829	10461829	C	G	SNP	TYK2	ENST00000264818	human	ensembl	74_37	-1	known	missense	c.3328	p.E1110Q	0.999	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,pfscan_Prot_kinase_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_Tyr_kinase_non-rcpt_TYK2_N	-	no_errors	TYK2	HGNC	ENSG00000105397				32	0	0.00	40	3	6.98
TYR	0	genome.wustl.edu	37	11	89028425	89028425	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	11	89028425	89028425	G	T	SNP	TYR	ENST00000263321	human	ensembl	74_37	+1	known	missense	c.1481	p.G494V	0.001	NULL	pfam_Tyrosinase,superfamily_Unchr_di-copper_centre,prints_Tyrosinase	-	no_errors	TYR	HGNC	ENSG00000077498	tier1	-	-	75	0	0.00	66	12	15.38
UAP1L1	0	genome.wustl.edu	37	9	139975304	139975304	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	9	139975304	139975304	G	T	SNP	UAP1L1	ENST00000409858	human	ensembl	74_37	+1	known	missense	c.1342	p.A448S	0.012	pfam_UDPGP_trans	pfam_UDPGP_trans	-	no_errors	UAP1L1	HGNC	ENSG00000197355	tier1	-	-	65	0	0.00	63	8	11.27
UBE2O	0	genome.wustl.edu	37	17	74392719	74392719	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	74392719	74392719	C	A	SNP	UBE2O	ENST00000319380	human	ensembl	74_37	-1	known	missense	c.2299	p.V767L	0.000	NULL	pfam_UBQ-conjugat_E2,superfamily_UBQ-conjugating_enzyme/RWD,pfscan_UBQ-conjugat_E2	-	no_errors	UBE2O	HGNC	ENSG00000175931	tier1	-	-	45	0	0.00	46	5	9.80
UGDH	0	genome.wustl.edu	37	4	39512441	39512441	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	39512441	39512441	C	A	SNP	UGDH	ENST00000316423	human	ensembl	74_37	-1	known	missense	c.305	p.R102L	1.000	pfam_UDP-Glc/GDP-Man_DH_N,tigrfam_UDP-Glc/GDP-Man	pfam_UDP-Glc/GDP-Man_DH_N,pfam_UDP-Glc/GDP-Man_DH_C,pfam_UDP-Glc/GDP-Man_DH_dimer,superfamily_UDP-Glc/GDP-Man_DH_C,superfamily_6-PGluconate_DH_C-like,tigrfam_UDP-Glc/GDP-Man	-	no_errors	UGDH	HGNC	ENSG00000109814	tier1	-	-	47	0	0.00	76	8	9.52
UHRF1	0	genome.wustl.edu	37	19	4961536	4961536	+	RNA	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	4961536	4961536	G	T	SNP	UHRF1	ENST00000262952	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	UHRF1	HGNC	ENSG00000034063	tier1	-	-	9	0	0.00	16	4	20.00
UNC5C	0	genome.wustl.edu	37	4	96123921	96123921	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	96123921	96123921	G	C	SNP	UNC5C	ENST00000453304	human	ensembl	74_37	-1	known	missense	c.2097	p.I699M	1.000	NULL	pfam_ZU5,pfam_Death_domain,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5C	HGNC	ENSG00000182168	tier1	-	-	50	0	0.00	62	6	8.82
UPB1	0	genome.wustl.edu	37	22	24919603	24919603	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	22	24919603	24919603	C	A	SNP	UPB1	ENST00000326010	human	ensembl	74_37	+1	known	silent	c.933	p.G311	1.000	superfamily_C-N_Hydrolase,pfscan_C-N_Hydrolase	pfam_C-N_Hydrolase,superfamily_C-N_Hydrolase,pfscan_C-N_Hydrolase	-	no_errors	UPB1	HGNC	ENSG00000100024				72	0	0.00	66	5	7.04
USH2A	0	genome.wustl.edu	37	1	216595578	216595578	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	216595578	216595578	C	T	SNP	USH2A	ENST00000366943	human	ensembl	74_37	-1	known	missense	c.101	p.R34Q	0.671	NULL	pfam_Fibronectin_type3,pfam_EGF_laminin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_LamG-like,smart_Laminin_N,smart_EGF_laminin,smart_Fibronectin_type3,smart_Laminin_G,pfscan_EGF_laminin,pfscan_Fibronectin_type3,pfscan_Laminin_G,pfscan_Laminin_N	-	no_errors	USH2A	HGNC	ENSG00000042781	tier1	-	-	45	0	0.00	54	9	14.29
USP40	0	genome.wustl.edu	37	2	234429744	234429744	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	234429744	234429744	C	T	SNP	USP40	ENST00000450966	human	ensembl	74_37	-1	known	missense	c.2251	p.E751K	0.226	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP40	HGNC	ENSG00000085982				42	0	0.00	61	4	6.06
USP5	0	genome.wustl.edu	37	12	6973255	6973255	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	12	6973255	6973255	G	T	SNP	USP5	ENST00000229268	human	ensembl	74_37	+1	known	missense	c.2140	p.G714C	1.000	pfam_Peptidase_C19/C67,superfamily_UBA-like,pirsf_Ubiquitinyl_hydrolase,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfam_UBA/Ts_N,pfam_Znf_UBP,superfamily_UBA-like,smart_Znf_UBP,smart_UBA/transl_elong_EF1B_N_euk,pirsf_Ubiquitinyl_hydrolase,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP5	HGNC	ENSG00000111667	tier1	-	-	47	0	0.00	58	6	9.38
UVSSA	0	genome.wustl.edu	37	4	1343540	1343540	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	1343540	1343540	G	T	SNP	UVSSA	ENST00000389851	human	ensembl	74_37	+1	known	silent	c.327	p.L109	1.000	superfamily_ENTH_VHS	pfam_DUF2043,superfamily_ENTH_VHS	-	no_errors	UVSSA	HGNC	ENSG00000163945	tier1	-	-	45	0	0.00	46	12	20.34
UVSSA	0	genome.wustl.edu	37	4	1343542	1343542	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	1343542	1343542	G	T	SNP	UVSSA	ENST00000389851	human	ensembl	74_37	+1	known	missense	c.329	p.R110M	1.000	superfamily_ENTH_VHS	pfam_DUF2043,superfamily_ENTH_VHS	-	no_errors	UVSSA	HGNC	ENSG00000163945	tier1	-	-	47	0	0.00	48	12	20.00
VANGL2	0	genome.wustl.edu	37	1	160389362	160389362	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	160389362	160389362	G	T	SNP	VANGL2	ENST00000368061	human	ensembl	74_37	+1	known	missense	c.763	p.D255Y	0.997	pfam_Strabismus,pirsf_Strabismus	pfam_Strabismus,pirsf_Strabismus	-	no_errors	VANGL2	HGNC	ENSG00000162738				27	0	0.00	27	4	12.90
VSX2	0	genome.wustl.edu	37	14	74706337	74706337	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	14	74706337	74706337	G	C	SNP	VSX2	ENST00000261980	human	ensembl	74_37	+1	known	missense	c.73	p.A25P	0.980	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	VSX2	HGNC	ENSG00000119614	tier1	-	-	66	0	0.00	66	8	10.81
WASF3	0	genome.wustl.edu	37	13	27256798	27256798	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	13	27256798	27256798	G	T	SNP	WASF3	ENST00000335327	human	ensembl	74_37	+1	known	silent	c.1038	p.P346	0.001	NULL	pfam_WH2_dom,smart_WH2_dom,pfscan_WH2_dom	-	no_errors	WASF3	HGNC	ENSG00000132970	tier1	-	-	99	0	0.00	115	11	8.73
WDFY4	0	genome.wustl.edu	37	10	50165273	50165273	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	50165273	50165273	C	A	SNP	WDFY4	ENST00000325239	human	ensembl	74_37	+1	known	missense	c.8077	p.P2693T	1.000	pfam_BEACH_dom,superfamily_BEACH_dom,pfscan_BEACH_dom	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY4	HGNC	ENSG00000128815	tier1	-	-	63	0	0.00	64	9	12.33
WDR27	0	genome.wustl.edu	37	6	170068164	170068164	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	170068164	170068164	C	G	SNP	WDR27	ENST00000448612	human	ensembl	74_37	-1	known	missense	c.574	p.G192R	0.979	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR27	HGNC	ENSG00000184465				63	0	0.00	37	4	9.76
WDR6	0	genome.wustl.edu	37	3	49051447	49051447	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	3	49051447	49051447	G	T	SNP	WDR6	ENST00000395474	human	ensembl	74_37	+1	known	missense	c.2570	p.R857L	0.008	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_Quino_amine_DH_bsu,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR6	HGNC	ENSG00000178252				49	0	0.00	45	3	6.25
WDR62	0	genome.wustl.edu	37	19	36573985	36573985	+	Nonsense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	36573985	36573985	C	G	SNP	WDR62	ENST00000401500	human	ensembl	74_37	+1	known	nonsense	c.1392	p.Y464*	0.673	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR62	HGNC	ENSG00000075702	tier1	-	-	37	0	0.00	43	4	8.51
WDR87	0	genome.wustl.edu	37	19	38383272	38383272	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	38383272	38383272	G	C	SNP	WDR87	ENST00000447313	human	ensembl	74_37	-1	known	missense	c.3071	p.S1024C	0.000	superfamily_ARM-type_fold	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,superfamily_Quinolinate_PRibosylTrfase_C,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR87	HGNC	ENSG00000171804	tier1	-	-	75	0	0.00	73	8	9.88
WDR87	0	genome.wustl.edu	37	19	38385259	38385259	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	38385259	38385259	C	A	SNP	WDR87	ENST00000447313	human	ensembl	74_37	-1	known	missense	c.1084	p.G362C	0.857	superfamily_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,superfamily_Quinolinate_PRibosylTrfase_C,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR87	HGNC	ENSG00000171804				37	0	0.00	23	3	11.54
WRN	0	genome.wustl.edu	37	8	31004645	31004645	+	Splice_Site	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	8	31004645	31004645	G	T	SNP	WRN	ENST00000298139	human	ensembl	74_37	+1	known	splice_site	c.3459+1	e28+1	1.000	-	-	-	no_errors	WRN	HGNC	ENSG00000165392	tier1	-	-	61	0	0.00	90	5	5.26
XIRP2	0	genome.wustl.edu	37	2	168102950	168102950	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	2	168102950	168102950	A	T	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	missense	c.5048	p.E1683V	1.000	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092	tier1	-	-	34	0	0.00	43	4	8.51
XKR7	0	genome.wustl.edu	37	20	30585020	30585020	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	20	30585020	30585020	C	A	SNP	XKR7	ENST00000562532	human	ensembl	74_37	+1	known	silent	c.1500	p.V500	1.000	NULL	pfam_Transport_prot_XK	-	no_errors	XKR7	HGNC	ENSG00000260903	tier1	-	-	43	0	0.00	52	4	7.14
XKR8	0	genome.wustl.edu	37	1	28293102	28293102	+	Silent	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	28293102	28293102	G	A	SNP	XKR8	ENST00000373884	human	ensembl	74_37	+1	known	silent	c.579	p.P193	0.000	pfam_Transport_prot_XK	pfam_Transport_prot_XK	-	no_errors	XKR8	HGNC	ENSG00000158156	tier1	-	-	68	0	0.00	71	6	7.79
XPO6	0	genome.wustl.edu	37	16	28146539	28146539	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	28146539	28146539	C	A	SNP	XPO6	ENST00000304658	human	ensembl	74_37	-1	known	missense	c.1441	p.D481Y	1.000	superfamily_ARM-type_fold	pfam_Exportin-1/Importin-b-like,pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N,pfscan_Importin-beta_N	-	no_errors	XPO6	HGNC	ENSG00000169180	tier1	-	-	59	0	0.00	70	10	12.50
XRCC6	0	genome.wustl.edu	37	22	42032580	42032580	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	22	42032580	42032580	A	G	SNP	XRCC6	ENST00000359308	human	ensembl	74_37	+1	known	missense	c.395	p.Q132R	0.251	pirsf_Ku70,pfam_Ku_N,tigrfam_Ku70	pirsf_Ku70,pfam_Ku_N,pfam_Ku70/Ku80_beta-barrel_dom,pfam_Ku_C,pfam_SAP_dom,superfamily_SPOC_like_C_dom,smart_Ku70/Ku80_beta-barrel_dom,smart_SAP_dom,pfscan_SAP_dom,tigrfam_Ku70	-	no_errors	XRCC6	HGNC	ENSG00000196419				107	0	0.00	72	4	5.26
YIPF2	0	genome.wustl.edu	37	19	11038537	11038537	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	11038537	11038537	C	T	SNP	YIPF2	ENST00000253031	human	ensembl	74_37	-1	known	missense	c.130	p.V44M	0.001	NULL	pfam_Yip1	-	no_errors	YIPF2	HGNC	ENSG00000130733	tier1	-	-	62	0	0.00	59	5	7.81
ZAN	0	genome.wustl.edu	37	7	100358086	100358086	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	100358086	100358086	G	T	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	missense	c.3769	p.V1257L	1.000	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839	tier1	-	-	143	0	0.00	171	10	5.49
ZAN	0	genome.wustl.edu	37	7	100358114	100358114	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	100358114	100358114	G	C	SNP	ZAN	ENST00000546292	human	ensembl	74_37	+1	known	missense	c.3797	p.R1266P	0.959	pfam_VWF_type-D,smart_VWF_type-D	pfam_VWF_type-D,pfam_MAM_dom,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_ConA-like_lec_gl_sf,superfamily_TIL_dom,smart_MAM_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_MAM_dom	-	no_errors	ZAN	HGNC	ENSG00000146839	tier1	-	-	145	0	0.00	174	10	5.43
ZBTB22	0	genome.wustl.edu	37	6	33283128	33283128	+	Silent	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	33283128	33283128	G	A	SNP	ZBTB22	ENST00000418724	human	ensembl	74_37	-1	known	silent	c.1566	p.F522	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB22	HGNC	ENSG00000236104	tier1	-	-	56	0	0.00	52	9	14.75
ZBTB40	0	genome.wustl.edu	37	1	22839481	22839481	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	22839481	22839481	G	T	SNP	ZBTB40	ENST00000375647	human	ensembl	74_37	+1	known	silent	c.2526	p.G842	0.241	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB40	HGNC	ENSG00000184677	tier1	-	-	53	0	0.00	66	6	8.33
ZBTB41	0	genome.wustl.edu	37	1	197169221	197169221	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	197169221	197169221	A	G	SNP	ZBTB41	ENST00000367405	human	ensembl	74_37	-1	known	missense	c.383	p.L128P	1.000	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,pfscan_BTB/POZ-like	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB41	HGNC	ENSG00000177888				49	0	0.00	54	4	6.90
ZBTB9	0	genome.wustl.edu	37	6	33424232	33424232	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	33424232	33424232	G	T	SNP	ZBTB9	ENST00000395064	human	ensembl	74_37	+1	known	missense	c.1355	p.C452F	1.000	smart_Znf_C2H2-like	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB9	HGNC	ENSG00000213588	tier1	-	-	49	0	0.00	62	5	7.46
ZC3H12D	0	genome.wustl.edu	37	6	149771832	149771832	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	149771832	149771832	A	T	SNP	ZC3H12D	ENST00000389942	human	ensembl	74_37	-1	known	missense	c.1571	p.L524Q	0.000	NULL	pfam_RNase_Zc3h12	-	no_errors	ZC3H12D	HGNC	ENSG00000178199	tier1	-	-	50	0	0.00	74	7	8.64
ZC3H13	0	genome.wustl.edu	37	13	46549674	46549674	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	13	46549674	46549674	C	A	SNP	ZC3H13	ENST00000242848	human	ensembl	74_37	-1	known	nonsense	c.2212	p.E738*	1.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H13	HGNC	ENSG00000123200	tier1	-	-	68	0	0.00	79	12	13.19
ZCCHC11	0	genome.wustl.edu	37	1	52956462	52956462	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	1	52956462	52956462	C	A	SNP	ZCCHC11	ENST00000257177	human	ensembl	74_37	-1	known	missense	c.1330	p.D444Y	1.000	NULL	pfam_PAP_assoc,pfam_Znf_CCHC,pfam_Nucleotidyltransferase,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC11	HGNC	ENSG00000134744	tier1	-	-	79	0	0.00	91	10	9.90
ZDHHC11B	0	genome.wustl.edu	37	5	751285	751285	+	Silent	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	5	751285	751285	C	A	SNP	ZDHHC11B	ENST00000382776	human	ensembl	74_37	-1	known	silent	c.591	p.V197	0.010	NULL	pfam_Znf_DHHC_palmitoyltrfase,pfscan_Znf_DHHC_palmitoyltrfase	-	no_errors	ZDHHC11B	HGNC	ENSG00000206077	tier1	-	-	174	0	0.00	195	12	5.80
ZFP57	0	genome.wustl.edu	37	6	29641135	29641135	+	Silent	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	29641135	29641135	G	C	SNP	ZFP57	ENST00000488757	human	ensembl	74_37	-1	known	silent	c.753	p.R251	0.024	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZFP57	HGNC	ENSG00000204644	tier1	-	-	63	0	0.00	71	15	17.44
ZKSCAN3	0	genome.wustl.edu	37	6	28331149	28331149	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	6	28331149	28331149	C	T	SNP	ZKSCAN3	ENST00000252211	human	ensembl	74_37	+1	known	missense	c.620	p.T207I	0.162	superfamily_Krueppel-associated_box	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN3	HGNC	ENSG00000189298	tier1	-	-	57	0	0.00	58	4	6.45
ZNF117	0	genome.wustl.edu	37	7	64438934	64438934	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	64438934	64438934	C	A	SNP	ZNF117	ENST00000282869	human	ensembl	74_37	-1	known	missense	c.1015	p.G339C	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF117	HGNC	ENSG00000152926	tier1	-	-	42	0	0.00	66	7	9.59
ZNF138	0	genome.wustl.edu	37	7	64291962	64291962	+	Silent	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	7	64291962	64291962	G	C	SNP	ZNF138	ENST00000359735	human	ensembl	74_37	+1	known	silent	c.171	p.V57	0.075	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF138	HGNC	ENSG00000197008	tier1	-	-	68	0	0.00	102	9	8.11
ZNF17	0	genome.wustl.edu	37	19	57932722	57932722	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	57932722	57932722	A	G	SNP	ZNF17	ENST00000601808	human	ensembl	74_37	+1	known	missense	c.1862	p.Y621C	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF17	HGNC	ENSG00000186272	tier1	-	-	78	0	0.00	99	8	7.48
ZNF33A	0	genome.wustl.edu	37	10	38343809	38343809	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	10	38343809	38343809	G	C	SNP	ZNF33A	ENST00000432900	human	ensembl	74_37	+1	known	missense	c.775	p.G259R	0.681	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF33A	HGNC	ENSG00000189180	tier1	-	-	39	0	0.00	64	12	15.79
ZNF519	0	genome.wustl.edu	37	18	14105606	14105606	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	18	14105606	14105606	C	G	SNP	ZNF519	ENST00000590202	human	ensembl	74_37	-1	known	missense	c.933	p.Q311H	0.986	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF519	HGNC	ENSG00000175322	tier1	-	-	58	0	0.00	70	6	7.89
ZNF529	0	genome.wustl.edu	37	19	37038208	37038208	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	37038208	37038208	C	T	SNP	ZNF529	ENST00000591340	human	ensembl	74_37	-1	known	missense	c.1252	p.G418S	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF529	HGNC	ENSG00000186020				54	0	0.00	76	4	5.00
ZNF563	0	genome.wustl.edu	37	19	12430083	12430083	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	12430083	12430083	C	A	SNP	ZNF563	ENST00000595977	human	ensembl	74_37	-1	known	missense	c.638	p.R213L	0.008	NULL	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF563	HGNC	ENSG00000188868	tier1	-	-	134	0	0.00	177	15	7.81
ZNF592	0	genome.wustl.edu	37	15	85326476	85326476	+	Silent	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	15	85326476	85326476	G	T	SNP	ZNF592	ENST00000299927	human	ensembl	74_37	+1	known	silent	c.570	p.P190	0.054	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF592	HGNC	ENSG00000166716	tier1	-	-	43	0	0.00	42	4	8.70
ZNF594	0	genome.wustl.edu	37	17	5085724	5085724	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	5085724	5085724	C	T	SNP	ZNF594	ENST00000399604	human	ensembl	74_37	-1	known	missense	c.1828	p.D610N	0.002	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF594	HGNC	ENSG00000180626	tier1	-	-	120	0	0.00	137	18	11.61
ZNF646	0	genome.wustl.edu	37	16	31087847	31087847	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	16	31087847	31087847	C	T	SNP	ZNF646	ENST00000300850	human	ensembl	74_37	+1	known	missense	c.202	p.R68W	0.551	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF646	HGNC	ENSG00000167395	tier1	-	-	51	0	0.00	65	6	8.45
ZNF676	0	genome.wustl.edu	37	19	22364172	22364173	+	Frame_Shift_Ins	INS	-	-	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	22364172	22364173	0	A	INS	ZNF676	ENST00000397121	human	ensembl	74_37	-1	known	frame_shift_ins	c.347_346	p.G116fs	0.000:0.003	NULL	pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF676	HGNC	ENSG00000196109				126	0	0.00	115	8	6.50
ZNF750	0	genome.wustl.edu	37	17	80790122	80790122	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	17	80790122	80790122	G	T	SNP	ZNF750	ENST00000269394	human	ensembl	74_37	-1	known	nonsense	c.209	p.S70*	0.201	NULL	NULL	-	no_errors	ZNF750	HGNC	ENSG00000141579	tier1	-	-	71	0	0.00	58	24	29.27
ZNF761	0	genome.wustl.edu	37	19	53959386	53959386	+	RNA	SNP	G	G	C			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	53959386	53959386	G	C	SNP	ZNF761	ENST00000334095	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.204	-	-	-	no_errors	ZNF761	HGNC	ENSG00000160336	tier1	-	-	144	0	0.00	148	8	5.13
ZNF765	0	genome.wustl.edu	37	19	53912375	53912375	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	53912375	53912375	G	A	SNP	ZNF765	ENST00000396408	human	ensembl	74_37	+1	known	missense	c.1567	p.V523M	0.004	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF765	HGNC	ENSG00000196417	tier1	-	-	79	0	0.00	100	6	5.66
ZNF876P	0	genome.wustl.edu	37	4	248385	248385	+	RNA	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	4	248385	248385	C	A	SNP	ZNF876P	ENST00000356347	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.061	-	-	-	no_errors	ZNF876P	HGNC	ENSG00000198155	tier1	-	-	26	0	0.00	57	7	10.94
ZNF98	0	genome.wustl.edu	37	19	22574497	22574497	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	22574497	22574497	C	A	SNP	ZNF98	ENST00000357774	human	ensembl	74_37	-1	known	nonsense	c.1540	p.G514*	0.053	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF98	HGNC	ENSG00000197360	tier1	-	-	59	0	0.00	89	11	11.00
ZSCAN5C	0	genome.wustl.edu	37	19	56720301	56720301	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FP-01A-31D-A387-09	TCGA-LN-A9FP-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b4e74934-f10d-4f7c-aacb-dc3e8f75ba95	27379346-c896-4ae6-8780-020cac2513ef	19	56720301	56720301	G	T	SNP	ZSCAN5C	ENST00000376267	human	ensembl	74_37	+1	known	missense	c.1223	p.G408V	0.768	pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN5C	HGNC	ENSG00000204532	tier1	-	-	71	0	0.00	80	5	5.88
