Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCB6	0	genome.wustl.edu	37	2	220082512	220082512	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	220082512	220082512	C	A	SNP	ABCB6	ENST00000265316	human	ensembl	74_37	-1	known	missense	c.567	p.W189C	1.000	NULL	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCB6	HGNC	ENSG00000115657				62	0	0.00	44	4	8.33
ACBD4	0	genome.wustl.edu	37	17	43216519	43216519	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	17	43216519	43216519	C	T	SNP	ACBD4	ENST00000321854	human	ensembl	74_37	+1	known	missense	c.781	p.P261S	0.219	NULL	pfam_Acyl-CoA-binding_protein,superfamily_Acyl-CoA-binding_protein,prints_Acyl-CoA-binding_protein	-	no_errors	ACBD4	HGNC	ENSG00000181513	tier1	-	-	100	0	0.00	55	17	23.61
ADAMTS19	0	genome.wustl.edu	37	5	129039941	129039941	+	Frame_Shift_Del	DEL	A	A	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	5	129039941	129039941	A	-	DEL	ADAMTS19	ENST00000274487	human	ensembl	74_37	+1	known	frame_shift_del	c.3151	p.K1051fs	0.999	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_PLAC,pfam_Pept_M10_metallopeptidase,superfamily_Thrombospondin_1_rpt,smart_ADAM_Cys-rich,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS19	HGNC	ENSG00000145808	tier1			60	0	0.00	17	2	10.53
ADAMTSL1	0	genome.wustl.edu	37	9	18721596	18721596	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	9	18721596	18721596	C	G	SNP	ADAMTSL1	ENST00000380548	human	ensembl	74_37	+1	novel	missense	c.1939	p.L647V	1.000	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,pfam_Immunoglobulin,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,prints_Peptidase_M12B_ADAM-TS,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	ADAMTSL1	HGNC	ENSG00000178031	tier1	-	-	69	0	0.00	16	8	33.33
AHSA1	0	genome.wustl.edu	37	14	77924544	77924544	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	14	77924544	77924544	G	T	SNP	AHSA1	ENST00000216479	human	ensembl	74_37	+1	known	missense	c.12	p.W4C	1.000	NULL	pfam_AHSA1_N,pfam_Activator_of_Hsp90_ATPase,superfamily_AHSA1_N	-	no_errors	AHSA1	HGNC	ENSG00000100591	tier1	-	-	71	0	0.00	41	4	8.89
AIM1L	0	genome.wustl.edu	37	1	26670651	26670653	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	26670651	26670653	TCC	-	DEL	AIM1L	ENST00000374207	human	ensembl	74_37	-1	known	in_frame_del	c.533_531	p.E178in_frame_del	0.998:0.998:0.968	NULL	superfamily_PDZ	-	no_errors	AIM1L	HGNC	ENSG00000176092	tier1			48	0	0.00	30	3	9.09
AKNA	0	genome.wustl.edu	37	9	117138828	117138828	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	9	117138828	117138828	G	A	SNP	AKNA	ENST00000307564	human	ensembl	74_37	-1	known	missense	c.1259	p.T420M	0.000	NULL	pfam_TF_AT-hook	-	no_errors	AKNA	HGNC	ENSG00000106948				72	0	0.00	41	3	6.82
ALDH3B1	0	genome.wustl.edu	37	11	67786319	67786319	+	Silent	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	67786319	67786319	G	A	SNP	ALDH3B1	ENST00000007633	human	ensembl	74_37	+1	known	silent	c.348	p.P116	0.000	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH,pirsf_Aldehyde_DH_NAD(P)	-	no_errors	ALDH3B1	HGNC	ENSG00000006534				41	0	0.00	24	4	14.29
AMPH	0	genome.wustl.edu	37	7	38468072	38468072	+	RNA	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	7	38468072	38468072	G	T	SNP	AMPH	ENST00000471913	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	AMPH	HGNC	ENSG00000078053	tier1	-	-	62	0	0.00	12	8	40.00
AMPH	0	genome.wustl.edu	37	7	38468073	38468073	+	RNA	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	7	38468073	38468073	C	T	SNP	AMPH	ENST00000471913	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	AMPH	HGNC	ENSG00000078053	tier1	-	-	61	0	0.00	12	8	40.00
ANKRD28	0	genome.wustl.edu	37	3	15753656	15753656	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	15753656	15753656	G	T	SNP	ANKRD28	ENST00000383777	human	ensembl	74_37	-1	known	missense	c.1273	p.L425I	1.000	superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	ANKRD28	HGNC	ENSG00000206560				67	0	0.00	24	2	7.69
ANKRD30B	0	genome.wustl.edu	37	18	14852390	14852390	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	18	14852390	14852390	C	A	SNP	ANKRD30B	ENST00000358984	human	ensembl	74_37	+1	known	missense	c.4090	p.Q1364K	0.485	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD30B	HGNC	ENSG00000180777				50	0	0.00	23	2	8.00
APOH	0	genome.wustl.edu	37	17	64219888	64219888	+	Frame_Shift_Del	DEL	A	A	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	17	64219888	64219888	A	-	DEL	APOH	ENST00000205948	human	ensembl	74_37	-1	known	frame_shift_del	c.343	p.Y115fs	0.995	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_Sushi_2,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	APOH	HGNC	ENSG00000091583	tier1			56	0	0.00	33	2	5.71
AQR	0	genome.wustl.edu	37	15	35178780	35178780	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	15	35178780	35178780	G	T	SNP	AQR	ENST00000156471	human	ensembl	74_37	-1	known	missense	c.2764	p.P922T	1.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	AQR	HGNC	ENSG00000021776	tier1	-	-	65	0	0.00	10	9	47.37
ARAP2	0	genome.wustl.edu	37	4	36230984	36230984	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	4	36230984	36230984	T	C	SNP	ARAP2	ENST00000303965	human	ensembl	74_37	-1	known	missense	c.125	p.N42S	1.000	pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_RhoGAP_dom,pfam_Pleckstrin_homology,pfam_ArfGAP,pfam_SAM_type1,pfam_SAM_2,pfam_Ras-assoc,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP2	HGNC	ENSG00000047365	tier1	-	-	52	0	0.00	8	9	52.94
ARHGAP42	0	genome.wustl.edu	37	11	100792317	100792317	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	100792317	100792317	G	T	SNP	ARHGAP42	ENST00000298815	human	ensembl	74_37	+1	known	missense	c.579	p.K193N	1.000	NULL	pfam_RhoGAP_dom,pfam_SH3_domain,superfamily_Rho_GTPase_activation_prot,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_RhoGAP_dom,smart_SH3_domain,pfscan_Pleckstrin_homology,pfscan_SH3_domain,pfscan_RhoGAP_dom	-	no_errors	ARHGAP42	HGNC	ENSG00000165895	tier1	-	-	95	0	0.00	68	4	5.56
ARHGEF1	0	genome.wustl.edu	37	19	42406492	42406492	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	19	42406492	42406492	G	A	SNP	ARHGEF1	ENST00000337665	human	ensembl	74_37	+1	known	missense	c.1528	p.V510M	0.998	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_RGS-like_dom,pfam_DH-domain,superfamily_Regulat_G_prot_signal_superfam,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	ARHGEF1	HGNC	ENSG00000076928	tier1	-	-	49	0	0.00	3	5	62.50
ATR	0	genome.wustl.edu	37	3	142172056	142172056	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	142172056	142172056	G	T	SNP	ATR	ENST00000350721	human	ensembl	74_37	-1	known	missense	c.7675	p.H2559N	1.000	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PI3/4_kinase_cat_dom,pfam_PIK-rel_kinase_FAT,pfam_UME,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_UME,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_HEAT_type_2,pfscan_PI3/4_kinase_cat_dom	-	no_errors	ATR	HGNC	ENSG00000175054				50	0	0.00	25	3	10.71
BBS9	0	genome.wustl.edu	37	7	33423379	33423379	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	7	33423379	33423379	G	A	SNP	BBS9	ENST00000242067	human	ensembl	74_37	+1	known	missense	c.1891	p.D631N	1.000	NULL	NULL	-	no_errors	BBS9	HGNC	ENSG00000122507	tier1	-	-	98	0	0.00	57	7	10.94
BDNF	0	genome.wustl.edu	37	11	27679009	27679011	+	RNA	DEL	TGT	TGT	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	TGT	TGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	27679009	27679011	TGT	-	DEL	BDNF	ENST00000584049	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.021:0.000:0.000	-	-	-	no_errors	BDNF	HGNC	ENSG00000176697	tier1			12	0	0.00	4	2	33.33
BRAF	0	genome.wustl.edu	37	7	140481412	140481412	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	7	140481412	140481412	C	A	SNP	BRAF	ENST00000288602	human	ensembl	74_37	-1	known	nonsense	c.1396	p.G466*	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Raf-like_ras-bd,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_Kinase-like_dom,smart_Raf-like_ras-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Raf-like_ras-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_DAG/PE-bd	-	no_errors	BRAF	HGNC	ENSG00000157764				65	0	0.00	30	2	6.25
BRCA1	0	genome.wustl.edu	37	17	41219693	41219693	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	17	41219693	41219693	G	T	SNP	BRCA1	ENST00000471181	human	ensembl	74_37	-1	known	missense	c.5069	p.A1690D	1.000	pirsf_BRCA1,pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	pirsf_BRCA1,pfam_BRCT_dom,pfam_Znf_C3HC4_RING-type,superfamily_BRCT_dom,smart_Znf_RING,smart_BRCT_dom,prints_BRCA1,pfscan_BRCT_dom,pfscan_Znf_RING	-	no_errors	BRCA1	HGNC	ENSG00000012048	tier1	-	-	42	0	0.00	24	3	11.11
C8orf82	0	genome.wustl.edu	37	8	145753146	145753146	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	8	145753146	145753146	G	C	SNP	C8orf82	ENST00000524821	human	ensembl	74_37	-1	known	missense	c.231	p.F77L	1.000	NULL	NULL	-	no_errors	C8orf82	HGNC	ENSG00000213563	tier1	-	-	82	0	0.00	61	16	20.78
CAD	0	genome.wustl.edu	37	2	27456547	27456547	+	Silent	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	27456547	27456547	C	T	SNP	CAD	ENST00000264705	human	ensembl	74_37	+1	known	silent	c.3270	p.S1090	1.000	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_ATP-grasp_carboxylate-amine,pfam_Dala_Dala_lig_C,pfscan_ATP-grasp,tigrfam_CarbamoylP_synth_lsu	pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_ssu_N,pfam_Asp/Orn_carbamoyltranf_P-bd,pfam_GATASE,pfam_Asp_carbamoyltransf_Asp/Orn-bd,pfam_CarbamoylP_synth_lsu_oligo,pfam_CarbamoylP_synth_lsu_N,pfam_ATP-grasp_carboxylate-amine,pfam_MGS-like_dom,pfam_Dala_Dala_lig_C,pfam_Amidohydro_1,superfamily_Asp/Orn_carbamoylTrfase,superfamily_CarbamoylP_synth_lsu_oligo,superfamily_CarbamoylP_synth_ssu_N,superfamily_PreATP-grasp_dom,superfamily_MGS-like_dom,superfamily_Metal-dep_hydrolase_composite,smart_MGS-like_dom,pfscan_ATP-grasp,prints_CbamoylP_synth_lsu_CPSase_dom,prints_Asp_carbamoyltransf,prints_Asp/Orn_carbamoylTrfase,tigrfam_CarbamoylP_synth_lsu,tigrfam_CarbamoylP_synth_ssu,tigrfam_Asp_carbamoyltransf	-	no_errors	CAD	HGNC	ENSG00000084774				24	0	0.00	10	3	23.08
CCDC108	0	genome.wustl.edu	37	2	219890846	219890846	+	Silent	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	219890846	219890846	G	A	SNP	CCDC108	ENST00000341552	human	ensembl	74_37	-1	known	silent	c.2247	p.C749	0.993	NULL	superfamily_PapD-like,pfscan_MSP_dom	-	no_errors	CCDC108	HGNC	ENSG00000181378	tier1	-	-	31	0	0.00	12	4	25.00
CCDC30	0	genome.wustl.edu	37	1	43002201	43002201	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	43002201	43002201	G	A	SNP	CCDC30	ENST00000340612	human	ensembl	74_37	+1	known	missense	c.46	p.E16K	0.998	NULL	NULL	-	no_errors	CCDC30	HGNC	ENSG00000186409				41	0	0.00	25	4	13.79
CCSER2	0	genome.wustl.edu	37	10	86185632	86185632	+	Frame_Shift_Del	DEL	A	A	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	10	86185632	86185632	A	-	DEL	CCSER2	ENST00000372088	human	ensembl	74_37	+1	known	frame_shift_del	c.1851	p.S619fs	0.396	NULL	NULL	-	no_errors	CCSER2	HGNC	ENSG00000107771	tier1			34	0	0.00	22	2	8.33
CD109	0	genome.wustl.edu	37	6	74475877	74475877	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	6	74475877	74475877	G	T	SNP	CD109	ENST00000287097	human	ensembl	74_37	+1	known	missense	c.1332	p.K444N	1.000	NULL	pfam_A2M_comp,pfam_A2M_N_2,pfam_Macroglobln_a2,pfam_A-macroglobulin_rcpt-bd,pfam_A2M_N,pfam_MacrogloblnA2_thiol-ester-bond,superfamily_Terpenoid_cyclase/PrenylTrfase,superfamily_A-macroglobulin_rcpt-bd	-	no_errors	CD109	HGNC	ENSG00000156535				54	0	0.00	23	3	11.54
CD1C	0	genome.wustl.edu	37	1	158262114	158262114	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	158262114	158262114	T	C	SNP	CD1C	ENST00000368170	human	ensembl	74_37	+1	known	missense	c.569	p.L190S	0.284	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1C	HGNC	ENSG00000158481	tier1	-	-	49	0	0.00	17	13	43.33
CDC6	0	genome.wustl.edu	37	17	38457118	38457118	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	17	38457118	38457118	G	T	SNP	CDC6	ENST00000209728	human	ensembl	74_37	+1	known	missense	c.1288	p.G430C	0.999	pirsf_Cell_div_Cdc6/18	pfam_ATPase_AAA_core,pfam_Cdc6_C_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pirsf_Cell_div_Cdc6/18	-	no_errors	CDC6	HGNC	ENSG00000094804	tier1	-	-	55	0	0.00	17	3	15.00
CDCA7L	0	genome.wustl.edu	37	7	21956476	21956477	+	Frame_Shift_Ins	INS	-	-	G			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	7	21956476	21956477	-	G	INS	CDCA7L	ENST00000406877	human	ensembl	74_37	-1	known	frame_shift_ins	c.61_60	p.S20fs	1.000:1.000	NULL	pfam_Znf-4CXXC_R1	-	no_errors	CDCA7L	HGNC	ENSG00000164649	tier1			54	0	0.00	27	2	6.90
CDH20	0	genome.wustl.edu	37	18	59170238	59170238	+	Silent	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	18	59170238	59170238	C	T	SNP	CDH20	ENST00000262717	human	ensembl	74_37	+1	known	silent	c.714	p.Y238	0.959	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH20	HGNC	ENSG00000101542				83	0	0.00	30	2	6.25
CDK5R2	0	genome.wustl.edu	37	2	219825199	219825201	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	219825199	219825201	GCT	-	DEL	CDK5R2	ENST00000302625	human	ensembl	74_37	+1	known	in_frame_del	c.657_659	p.L222in_frame_del	0.998:1.000:1.000	pfam_CDK5_activator,superfamily_Cyclin-like,pirsf_CDK5_activator	pfam_CDK5_activator,superfamily_Cyclin-like,pirsf_CDK5_activator	-	no_errors	CDK5R2	HGNC	ENSG00000171450	tier1			13	0	0.00	3	2	40.00
CEACAM5	0	genome.wustl.edu	37	19	42221564	42221564	+	Silent	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	19	42221564	42221564	C	T	SNP	CEACAM5	ENST00000221992	human	ensembl	74_37	+1	known	silent	c.1149	p.V383	0.004	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CEACAM5	HGNC	ENSG00000105388	tier1	-	-	143	0	0.00	61	12	16.22
CLEC4F	0	genome.wustl.edu	37	2	71044150	71044150	+	Silent	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	71044150	71044150	G	T	SNP	CLEC4F	ENST00000272367	human	ensembl	74_37	-1	known	silent	c.363	p.I121	0.976	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_Prefoldin,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	CLEC4F	HGNC	ENSG00000152672				54	0	0.00	34	2	5.56
CNEP1R1	0	genome.wustl.edu	37	16	50059594	50059594	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	16	50059594	50059594	G	T	SNP	CNEP1R1	ENST00000458059	human	ensembl	74_37	+1	known	missense	c.58	p.V20F	0.020	NULL	pfam_Transmembrane_protein_188	-	no_errors	CNEP1R1	HGNC	ENSG00000205423				68	0	0.00	30	4	11.76
COL6A6	0	genome.wustl.edu	37	3	130282295	130282295	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	130282295	130282295	G	A	SNP	COL6A6	ENST00000358511	human	ensembl	74_37	+1	known	missense	c.448	p.A150T	0.890	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A6	HGNC	ENSG00000206384				45	0	0.00	28	2	6.67
COX10	0	genome.wustl.edu	37	17	14063220	14063220	+	Silent	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	17	14063220	14063220	C	T	SNP	COX10	ENST00000261643	human	ensembl	74_37	+1	known	silent	c.651	p.N217	1.000	pfam_UbiA_prenyltransferase,pirsf_Protohaem_IX_farnesylTrfase_mt,tigrfam_Protohaem_IX_farnesylTrfase	pfam_UbiA_prenyltransferase,pirsf_Protohaem_IX_farnesylTrfase_mt,tigrfam_Protohaem_IX_farnesylTrfase	-	no_errors	COX10	HGNC	ENSG00000006695	tier1	-	-	49	0	0.00	25	11	30.56
CSMD1	0	genome.wustl.edu	37	8	2876139	2876139	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	8	2876139	2876139	T	-	DEL	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	frame_shift_del	c.7892	p.N2631fs	0.983	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1			73	0	0.00	18	2	10.00
CUL7	0	genome.wustl.edu	37	6	43016265	43016265	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	6	43016265	43016265	C	T	SNP	CUL7	ENST00000535468	human	ensembl	74_37	-1	known	missense	c.2120	p.R707H	0.000	NULL	pfam_Cullin_N,pfam_CPH_domain,pfam_APC_su10/DOC_dom,superfamily_Galactose-bd-like,superfamily_Cullin_homology,superfamily_ARM-type_fold,smart_Cullin_neddylation_domain,pfscan_Cullin_homology	-	no_errors	CUL7	HGNC	ENSG00000044090				53	0	0.00	38	2	5.00
CYP24A1	0	genome.wustl.edu	37	20	52781025	52781025	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	20	52781025	52781025	G	T	SNP	CYP24A1	ENST00000216862	human	ensembl	74_37	-1	known	missense	c.810	p.D270E	0.014	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_CYP24A_mit	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_CYP24A_mit,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450	-	no_errors	CYP24A1	HGNC	ENSG00000019186				86	0	0.00	30	4	11.76
CYP2A13	0	genome.wustl.edu	37	19	41596050	41596050	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	19	41596050	41596050	C	A	SNP	CYP2A13	ENST00000330436	human	ensembl	74_37	+1	known	missense	c.442	p.R148S	0.971	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-I_CYP2A-like,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV	-	no_errors	CYP2A13	HGNC	ENSG00000197838	tier1	rs146067729	-	98	0	0.00	44	4	8.33
DBR1	0	genome.wustl.edu	37	3	137886121	137886121	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	137886121	137886121	C	A	SNP	DBR1	ENST00000260803	human	ensembl	74_37	-1	known	missense	c.516	p.L172F	1.000	pfam_PEstase_dom	pfam_DBR1_C,pfam_PEstase_dom	-	no_errors	DBR1	HGNC	ENSG00000138231	tier1	-	-	30	0	0.00	11	6	35.29
DDX51	0	genome.wustl.edu	37	12	132628264	132628264	+	Frame_Shift_Del	DEL	C	C	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	12	132628264	132628264	C	0	DEL	DDX51	ENST00000397333	human	ensembl	74_37	-1	known	frame_shift_del	c.495	p.F166fs	0.359	NULL	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DDX51	HGNC	ENSG00000185163				13	0	0.00	4	2	33.33
DHX36	0	genome.wustl.edu	37	3	153993988	153993988	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	153993988	153993988	G	T	SNP	DHX36	ENST00000496811	human	ensembl	74_37	-1	known	missense	c.2999	p.P1000Q	0.303	NULL	pfam_Helicase-assoc_dom,pfam_DUF1605,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX36	HGNC	ENSG00000174953	tier1	-	-	43	0	0.00	17	3	15.00
DLGAP4	0	genome.wustl.edu	37	20	35156046	35156047	+	RNA	DEL	CA	CA	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	20	35156046	35156047	CA	-	DEL	DLGAP4	ENST00000475894	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	DLGAP4	HGNC	ENSG00000080845	tier1			24	0	0.00	4	2	33.33
DNAH9	0	genome.wustl.edu	37	17	11523027	11523027	+	Nonsense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	17	11523027	11523027	G	T	SNP	DNAH9	ENST00000262442	human	ensembl	74_37	+1	known	nonsense	c.1279	p.E427*	0.052	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH9	HGNC	ENSG00000007174				31	0	0.00	21	3	12.50
DNHD1	0	genome.wustl.edu	37	11	6588210	6588210	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	6588210	6588210	G	T	SNP	DNHD1	ENST00000254579	human	ensembl	74_37	+1	known	missense	c.11471	p.G3824V	0.774	NULL	pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom,superfamily_P-loop_NTPase,superfamily_t-SNARE	-	no_errors	DNHD1	HGNC	ENSG00000179532	tier1	-	-	36	0	0.00	18	3	14.29
DOCK11	0	genome.wustl.edu	37	X	117676956	117676956	+	Frame_Shift_Del	DEL	C	C	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	X	117676956	117676956	C	-	DEL	DOCK11	ENST00000276202	human	ensembl	74_37	+1	known	frame_shift_del	c.287	p.Q97fs	1.000	pfam_DOCK_C/D_N	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK11	HGNC	ENSG00000147251	tier1			62	0	0.00	11	2	15.38
DPP10	0	genome.wustl.edu	37	2	116548723	116548723	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	116548723	116548723	C	T	SNP	DPP10	ENST00000393147	human	ensembl	74_37	+1	known	missense	c.1610	p.P537L	0.954	NULL	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	DPP10	HGNC	ENSG00000175497	tier1	-	-	45	0	0.00	32	5	13.51
EEF2	0	genome.wustl.edu	37	19	3982335	3982335	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	19	3982335	3982335	C	A	SNP	EEF2	ENST00000309311	human	ensembl	74_37	-1	known	missense	c.700	p.A234S	1.000	pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFG/EF2_IV,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Transl_B-barrel,superfamily_EFG_III-V,smart_Transl_elong_EFG/EF2_IV,smart_EFG_V,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EEF2	HGNC	ENSG00000167658	tier1	-	-	39	0	0.00	20	4	16.67
EEPD1	0	genome.wustl.edu	37	7	36324326	36324326	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	7	36324326	36324326	C	T	SNP	EEPD1	ENST00000242108	human	ensembl	74_37	+1	known	missense	c.1073	p.A358V	0.021	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase	pfam_HhH_motif,pfam_Endo/exonuclease/phosphatase,pfam_GspK,superfamily_Endo/exonuclease/phosphatase,superfamily_RuvA_2-like,smart_Hlx-hairpin-Hlx_DNA-bd_motif,tigrfam_Competence_ComEA_HhH	-	no_errors	EEPD1	HGNC	ENSG00000122547				84	0	0.00	54	3	5.26
ENSG00000232623	0	genome.wustl.edu	37	21	33680842	33680842	+	RNA	SNP	T	T	G			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	21	33680842	33680842	T	G	SNP	ENSG00000232623	ENST00000450936	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	AP000266.7	Clone_based_vega_gene	ENSG00000232623	tier1	-	-	68	0	0.00	27	12	30.77
ENSG00000235999	0	genome.wustl.edu	37	1	149287783	149287783	+	RNA	SNP	A	A	G			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	149287783	149287783	A	G	SNP	ENSG00000235999	ENST00000433084	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-403I13.8	Clone_based_vega_gene	ENSG00000235999	tier1	rs138496340	-	52	0	0.00	19	3	13.64
ENSG00000254433	0	genome.wustl.edu	37	11	105967443	105967443	+	RNA	SNP	A	A	G			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	105967443	105967443	A	G	SNP	ENSG00000254433	ENST00000527594	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-677I18.3	Clone_based_vega_gene	ENSG00000254433	tier1	-	-	42	0	0.00	15	14	48.28
ENSG00000259198	0	genome.wustl.edu	37	15	40605506	40605506	+	RNA	DEL	G	G	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	15	40605506	40605506	G	-	DEL	ENSG00000259198	ENST00000559030	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RP11-133K1.6	Clone_based_vega_gene	ENSG00000259198	tier1			26	0	0.00	5	2	28.57
ENTHD1	0	genome.wustl.edu	37	22	40140045	40140045	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	22	40140045	40140045	A	G	SNP	ENTHD1	ENST00000325157	human	ensembl	74_37	-1	known	missense	c.1463	p.L488P	0.001	NULL	pfam_Epsin_dom_N,pfam_VHS,superfamily_ENTH_VHS,smart_Epsin-like_N,pfscan_Epsin-like_N	-	no_errors	ENTHD1	HGNC	ENSG00000176177	tier1	-	-	52	0	0.00	16	3	15.79
EPHA5	0	genome.wustl.edu	37	4	66230783	66230783	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	4	66230783	66230783	G	T	SNP	EPHA5	ENST00000273854	human	ensembl	74_37	-1	known	missense	c.2188	p.Q730K	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pirsf_Tyr_kinase_ephrin_rcpt,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA5	HGNC	ENSG00000145242				112	0	0.00	37	3	7.50
FAM9A	0	genome.wustl.edu	37	X	8761714	8761714	+	Silent	SNP	A	A	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	X	8761714	8761714	A	C	SNP	FAM9A	ENST00000381003	human	ensembl	74_37	-1	known	silent	c.915	p.L305	0.004	NULL	NULL	-	no_errors	FAM9A	HGNC	ENSG00000183304	tier1	-	-	34	0	0.00	12	3	20.00
FASTKD5	0	genome.wustl.edu	37	20	3128170	3128170	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	20	3128170	3128170	G	A	SNP	FASTKD5	ENST00000380266	human	ensembl	74_37	-1	known	missense	c.1547	p.T516I	1.000	pfam_FAST_2	pfam_FAST_2,pfam_FAST_Leu-rich,pfam_RAP,smart_RAP	-	no_errors	FASTKD5	HGNC	ENSG00000215251				14	0	0.00	10	2	16.67
FBXO18	0	genome.wustl.edu	37	10	5960397	5960397	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	10	5960397	5960397	G	T	SNP	FBXO18	ENST00000379999	human	ensembl	74_37	+1	known	missense	c.2209	p.A737S	1.000	pfam_UvrD-like_ATP-bd,superfamily_P-loop_NTPase	pfam_UvrD-like_ATP-bd,pfam_F-box_dom,superfamily_P-loop_NTPase,superfamily_F-box_dom,pfscan_F-box_dom	-	no_errors	FBXO18	HGNC	ENSG00000134452	tier1	-	-	28	0	0.00	9	3	25.00
FER	0	genome.wustl.edu	37	5	108516448	108516448	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	5	108516448	108516448	G	T	SNP	FER	ENST00000281092	human	ensembl	74_37	+1	known	missense	c.2049	p.R683S	1.000	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_non-rcpt_Fes_subgr,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_FCH_dom,superfamily_Kinase-like_dom,smart_FCH_dom,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,pfscan_FCH_dom,pfscan_SH2,pfscan_Prot_kinase_dom	-	no_errors	FER	HGNC	ENSG00000151422				105	0	0.00	44	4	8.33
FERMT2	0	genome.wustl.edu	37	14	53327793	53327794	+	RNA	INS	-	-	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	14	53327793	53327794	-	A	INS	FERMT2	ENST00000557255	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	FERMT2	HGNC	ENSG00000073712	tier1			41	0	0.00	21	3	12.50
FGD5	0	genome.wustl.edu	37	3	14862129	14862129	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	14862129	14862129	G	T	SNP	FGD5	ENST00000285046	human	ensembl	74_37	+1	known	missense	c.1551	p.E517D	0.000	NULL	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Znf_FYVE,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Znf_FYVE,pfscan_Pleckstrin_homology,pfscan_Znf_FYVE-rel,pfscan_DH-domain	-	no_errors	FGD5	HGNC	ENSG00000154783	tier1	-	-	90	0	0.00	33	4	10.81
FIP1L1	0	genome.wustl.edu	37	4	54319248	54319249	+	Frame_Shift_Del	DEL	AG	AG	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	4	54319248	54319249	AG	-	DEL	FIP1L1	ENST00000337488	human	ensembl	74_37	+1	known	frame_shift_del	c.1447_1448	p.E486fs	0.975:0.991	NULL	pfam_Fip1	-	no_errors	FIP1L1	HGNC	ENSG00000145216	tier1			30	0	0.00	19	4	17.39
FLG	0	genome.wustl.edu	37	1	152277995	152277995	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	152277995	152277995	C	A	SNP	FLG	ENST00000368799	human	ensembl	74_37	-1	known	missense	c.9367	p.G3123W	0.000	NULL	pfam_Filaggrin,pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom,prints_Filaggrin	-	no_errors	FLG	HGNC	ENSG00000143631	tier1	-	-	60	0	0.00	28	5	15.15
FTSJ1	0	genome.wustl.edu	37	X	48340858	48340858	+	Silent	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	X	48340858	48340858	G	T	SNP	FTSJ1	ENST00000348411	human	ensembl	74_37	+1	known	silent	c.723	p.L241	1.000	NULL	pfam_rRNA_MeTrfase_FtsJ_dom	-	no_errors	FTSJ1	HGNC	ENSG00000068438	tier1	-	-	31	0	0.00	9	3	25.00
GABARAPL2	0	genome.wustl.edu	37	16	75611681	75611681	+	RNA	SNP	A	A	G			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	16	75611681	75611681	A	G	SNP	GABARAPL2	ENST00000565985	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GABARAPL2	HGNC	ENSG00000034713	tier1	-	-	33	0	0.00	18	15	45.45
GALNT8	0	genome.wustl.edu	37	12	4872542	4872542	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	12	4872542	4872542	G	A	SNP	GALNT8	ENST00000252318	human	ensembl	74_37	+1	known	missense	c.1483	p.V495M	0.077	superfamily_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT8	HGNC	ENSG00000130035	tier1	-	-	53	0	0.00	45	4	8.16
GAS2	0	genome.wustl.edu	37	11	22747882	22747882	+	Silent	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	22747882	22747882	G	T	SNP	GAS2	ENST00000278187	human	ensembl	74_37	+1	known	silent	c.312	p.S104	0.961	pfam_CH-domain,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_GAS2_dom,pfam_CH-domain,superfamily_CH-domain,superfamily_GAS2_dom,smart_CH-domain,smart_GAS2_dom,pfscan_CH-domain	-	no_errors	GAS2	HGNC	ENSG00000148935	tier1	-	-	77	0	0.00	53	5	8.62
GCLC	0	genome.wustl.edu	37	6	53373988	53373988	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	6	53373988	53373988	T	C	SNP	GCLC	ENST00000229416	human	ensembl	74_37	-1	known	missense	c.814	p.I272V	0.997	pfam_GCS	pfam_GCS	-	no_errors	GCLC	HGNC	ENSG00000001084	tier1	-	-	46	0	0.00	27	7	20.59
GON4L	0	genome.wustl.edu	37	1	155733171	155733171	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	155733171	155733171	G	T	SNP	GON4L	ENST00000368331	human	ensembl	74_37	-1	known	missense	c.4658	p.A1553D	0.061	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580	tier1	-	-	101	0	0.00	58	4	6.45
GON4L	0	genome.wustl.edu	37	1	155753864	155753864	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	155753864	155753864	C	A	SNP	GON4L	ENST00000368331	human	ensembl	74_37	-1	known	missense	c.1805	p.G602V	1.000	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580				108	0	0.00	67	4	5.63
GPR98	0	genome.wustl.edu	37	5	90281288	90281288	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	5	90281288	90281288	G	T	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	missense	c.18101	p.G6034V	0.997	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199				62	0	0.00	30	2	6.25
HCAR3	0	genome.wustl.edu	37	12	123201265	123201265	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	12	123201265	123201265	T	C	SNP	HCAR3	ENST00000528880	human	ensembl	74_37	-1	known	missense	c.20	p.Q7R	0.000	NULL	pfam_GPCR_Rhodpsn,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	HCAR3	HGNC	ENSG00000255398	tier1	-	-	76	0	0.00	25	8	24.24
HELZ2	0	genome.wustl.edu	37	20	62191586	62191586	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	20	62191586	62191586	C	T	SNP	HELZ2	ENST00000467148	human	ensembl	74_37	-1	known	missense	c.7595	p.S2532N	0.864	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase	-	no_errors	HELZ2	HGNC	ENSG00000130589	tier1	-	-	70	0	0.00	29	4	12.12
HIRIP3	0	genome.wustl.edu	37	16	30005705	30005705	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	16	30005705	30005705	T	C	SNP	HIRIP3	ENST00000279392	human	ensembl	74_37	-1	known	missense	c.761	p.K254R	0.000	NULL	pfam_Histone_chaperone_domain_CHZ	-	no_errors	HIRIP3	HGNC	ENSG00000149929				98	0	0.00	38	2	5.00
HIST1H4H	0	genome.wustl.edu	37	6	26285573	26285573	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	6	26285573	26285573	T	C	SNP	HIST1H4H	ENST00000289352	human	ensembl	74_37	-1	known	missense	c.155	p.Y52C	1.000	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	pfam_Histone_core_D,pfam_TAF_TATA-bd,superfamily_Histone-fold,smart_Histone_H4,smart_TAF_TATA-bd,prints_Histone_H4	-	no_errors	HIST1H4H	HGNC	ENSG00000158406	tier1	-	-	62	0	0.00	34	18	34.62
HIST2H3D	0	genome.wustl.edu	37	1	149785084	149785084	+	Missense_Mutation	SNP	C	C	G			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	149785084	149785084	C	G	SNP	HIST2H3D	ENST00000331491	human	ensembl	74_37	-1	known	missense	c.153	p.E51D	1.000	superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	pfam_Histone_core_D,superfamily_Histone-fold,smart_Histone_H3,prints_Histone_H3	-	no_errors	HIST2H3D	HGNC	ENSG00000183598	tier1	-	-	106	0	0.00	47	10	17.54
HMCN2	0	genome.wustl.edu	37	9	133284204	133284204	+	RNA	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	9	133284204	133284204	G	A	SNP	HMCN2	ENST00000487727	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	HMCN2	HGNC	ENSG00000148357	tier1	-	-	62	0	0.00	14	10	41.67
HOXC10	0	genome.wustl.edu	37	12	54383342	54383343	+	RNA	INS	-	-	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	12	54383342	54383343	-	A	INS	HOXC10	ENST00000511575	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	HOXC10	HGNC	ENSG00000180818	tier1			41	0	0.00	25	2	7.41
HSPA6	0	genome.wustl.edu	37	1	161495860	161495860	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	161495860	161495860	G	A	SNP	HSPA6	ENST00000309758	human	ensembl	74_37	+1	known	missense	c.1412	p.R471H	0.989	pfam_Hsp_70_fam	pfam_Hsp_70_fam,pfam_MreB_Mrl,prints_Hsp_70_fam	-	no_errors	HSPA6	HGNC	ENSG00000173110	tier1	rs41299256	-	57	0	0.00	29	6	17.14
HYAL2	0	genome.wustl.edu	37	3	50357844	50357844	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	50357844	50357844	G	A	SNP	HYAL2	ENST00000357750	human	ensembl	74_37	-1	known	missense	c.77	p.T26I	1.000	pfam_Hyaluronidase,pirsf_Hyaluronidase	pfam_Hyaluronidase,superfamily_Glycoside_hydrolase_SF,pirsf_Hyaluronidase,prints_Hyaluronidase	-	no_errors	HYAL2	HGNC	ENSG00000068001	tier1	-	-	24	0	0.00	5	9	64.29
IL5RA	0	genome.wustl.edu	37	3	3139885	3139885	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	3139885	3139885	G	A	SNP	IL5RA	ENST00000256452	human	ensembl	74_37	-1	known	missense	c.457	p.L153F	0.985	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	pfam_IL-6_rcpt_alpha-bd,superfamily_Fibronectin_type3	-	no_errors	IL5RA	HGNC	ENSG00000091181				84	0	0.00	21	2	8.70
INO80D	0	genome.wustl.edu	37	2	206874404	206874404	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	206874404	206874404	G	A	SNP	INO80D	ENST00000403263	human	ensembl	74_37	-1	known	missense	c.1657	p.R553C	1.000	NULL	NULL	-	no_errors	INO80D	HGNC	ENSG00000114933				90	0	0.00	61	4	6.15
ISYNA1	0	genome.wustl.edu	37	19	18546480	18546480	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	19	18546480	18546480	T	A	SNP	ISYNA1	ENST00000338128	human	ensembl	74_37	-1	known	missense	c.1147	p.I383F	1.000	pfam_Myo-inos-1-P_Synthase,pfam_Myo-inos-1-P_Synthase_GAPDH,pirsf_Myo-inos-1-P_Synthase	pfam_Myo-inos-1-P_Synthase,pfam_Myo-inos-1-P_Synthase_GAPDH,pirsf_Myo-inos-1-P_Synthase	-	no_errors	ISYNA1	HGNC	ENSG00000105655	tier1	-	-	33	0	0.00	9	4	30.77
ITGA10	0	genome.wustl.edu	37	1	145532437	145532437	+	RNA	DEL	T	T	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	145532437	145532437	T	-	DEL	ITGA10	ENST00000481236	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ITGA10	HGNC	ENSG00000143127	tier1			26	0	0.00	6	2	25.00
ITPR3	0	genome.wustl.edu	37	6	33659405	33659405	+	Silent	SNP	G	G	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	6	33659405	33659405	G	C	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	silent	c.7239	p.G2413	1.000	pfam_Ion_trans_dom	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433				34	0	0.00	19	3	13.64
ITSN1	0	genome.wustl.edu	37	21	35209308	35209309	+	RNA	INS	-	-	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	21	35209308	35209309	-	C	INS	ITSN1	ENST00000472548	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000:1.000	-	-	-	no_errors	ITSN1	HGNC	ENSG00000205726	tier1			55	0	0.00	37	2	5.13
KCNB2	0	genome.wustl.edu	37	8	73849090	73849090	+	Silent	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	8	73849090	73849090	G	A	SNP	KCNB2	ENST00000523207	human	ensembl	74_37	+1	known	silent	c.1500	p.S500	0.236	pfam_K_chnl_volt-dep_Kv2	pfam_K_chnl_volt-dep_Kv2,pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv2.2,prints_K_chnl_volt-dep_Kv2,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv8	-	no_errors	KCNB2	HGNC	ENSG00000182674				43	0	0.00	36	2	5.26
KDM4B	0	genome.wustl.edu	37	19	5119803	5119805	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	19	5119803	5119805	GAG	-	DEL	KDM4B	ENST00000159111	human	ensembl	74_37	+1	known	in_frame_del	c.1255_1257	p.E422in_frame_del	0.988:1.000:1.000	NULL	pfam_JmjC_dom,pfam_TF_JmjN,superfamily_Znf_FYVE_PHD,smart_TF_JmjN,smart_JmjC_dom,smart_Znf_PHD,smart_Tudor,pfscan_TF_JmjN,pfscan_JmjC_dom	-	no_errors	KDM4B	HGNC	ENSG00000127663	tier1			30	0	0.00	9	2	18.18
KDR	0	genome.wustl.edu	37	4	55964887	55964887	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	4	55964887	55964887	T	C	SNP	KDR	ENST00000263923	human	ensembl	74_37	-1	known	missense	c.2350	p.I784V	1.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Ig_V-set,pfam_Immunoglobulin,pfam_CD80_C2-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR2_rcpt	-	no_errors	KDR	HGNC	ENSG00000128052	tier1	-	-	50	0	0.00	18	17	48.57
KIF26B	0	genome.wustl.edu	37	1	245850135	245850135	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	245850135	245850135	G	A	SNP	KIF26B	ENST00000407071	human	ensembl	74_37	+1	known	missense	c.3850	p.E1284K	1.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF26B	HGNC	ENSG00000162849	tier1	-	-	31	0	0.00	15	6	28.57
KIF3B	0	genome.wustl.edu	37	20	30919073	30919073	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	20	30919073	30919073	C	T	SNP	KIF3B	ENST00000375712	human	ensembl	74_37	+1	known	missense	c.2195	p.T732I	0.998	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF3B	HGNC	ENSG00000101350	tier1	-	-	45	0	0.00	32	4	11.11
KNTC1	0	genome.wustl.edu	37	12	123087277	123087277	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	12	123087277	123087277	G	T	SNP	KNTC1	ENST00000333479	human	ensembl	74_37	+1	known	missense	c.4815	p.W1605C	1.000	pfam_RZZ-complex_KNTC1/ROD_C	pfam_RZZ-complex_KNTC1/ROD_C,superfamily_Quino_amine_DH_bsu,superfamily_WD40_repeat_dom,superfamily_PAH	-	no_errors	KNTC1	HGNC	ENSG00000184445	tier1	-	-	72	0	0.00	50	5	9.09
LCORL	0	genome.wustl.edu	37	4	17885614	17885614	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	4	17885614	17885614	T	-	DEL	LCORL	ENST00000382226	human	ensembl	74_37	-1	known	frame_shift_del	c.1538	p.K513fs	1.000	NULL	pfam_HTH_Psq,superfamily_Homeodomain-like,pfscan_HTH_Psq	-	no_errors	LCORL	HGNC	ENSG00000178177	tier1			62	0	0.00	19	2	9.52
LINC00029	0	genome.wustl.edu	37	20	61665826	61665826	+	RNA	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	20	61665826	61665826	C	T	SNP	LINC00029	ENST00000370341	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00029	HGNC	ENSG00000125514	tier1	-	-	20	0	0.00	7	4	36.36
LOC101927708	0	genome.wustl.edu	37	11	3602402	3602402	+	RNA	DEL	A	A	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	3602402	3602402	A	-	DEL	LOC101927708	ENST00000527970	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.632	-	-	-	no_errors	RP13-726E6.2	Clone_based_vega_gene	ENSG00000255367	tier1			30	0	0.00	3	2	40.00
LRRN3	0	genome.wustl.edu	37	7	110763077	110763077	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	7	110763077	110763077	A	T	SNP	LRRN3	ENST00000308478	human	ensembl	74_37	+1	known	missense	c.249	p.K83N	0.999	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRRN3	HGNC	ENSG00000173114	tier1	-	-	47	0	0.00	11	8	42.11
LTBP2	0	genome.wustl.edu	37	14	74973428	74973428	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	14	74973428	74973428	T	C	SNP	LTBP2	ENST00000261978	human	ensembl	74_37	-1	known	missense	c.4006	p.I1336V	0.988	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_TB_dom,pfam_EG-like_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	LTBP2	HGNC	ENSG00000119681	tier1	-	-	47	0	0.00	16	5	23.81
MAMDC4	0	genome.wustl.edu	37	9	139752668	139752668	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	9	139752668	139752668	G	A	SNP	MAMDC4	ENST00000445819	human	ensembl	74_37	+1	known	missense	c.2851	p.A951T	0.049	pfam_MAM_dom,superfamily_ConA-like_lec_gl_sf,smart_MAM_dom,pfscan_MAM_dom	pfam_MAM_dom,pfam_LDrepeatLR_classA_rpt,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_MAM_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	MAMDC4	HGNC	ENSG00000177943				65	0	0.00	36	4	10.00
MASP1	0	genome.wustl.edu	37	3	187009140	187009140	+	Splice_Site	DEL	T	T	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	187009140	187009140	T	-	DEL	MASP1	ENST00000392470	human	ensembl	74_37	-1	putative	splice_site_del	c.1-2	e1-2	0.948	-	-	-	no_errors	MASP1	HGNC	ENSG00000127241	tier1			55	0	0.00	12	2	14.29
MCEE	0	genome.wustl.edu	37	2	71336956	71336956	+	RNA	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	71336956	71336956	T	C	SNP	MCEE	ENST00000462609	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MCEE	HGNC	ENSG00000124370	tier1	-	-	71	0	0.00	32	12	27.27
MED13L	0	genome.wustl.edu	37	12	116429734	116429734	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	12	116429734	116429734	C	A	SNP	MED13L	ENST00000281928	human	ensembl	74_37	-1	known	missense	c.3025	p.D1009Y	1.000	NULL	pfam_Mediator_Med13,pfam_Mediator_Med13_N_met/fun	-	no_errors	MED13L	HGNC	ENSG00000123066	tier1	-	-	37	0	0.00	17	5	22.73
MED15	0	genome.wustl.edu	37	22	20918793	20918795	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	22	20918793	20918795	CAG	-	DEL	MED15	ENST00000263205	human	ensembl	74_37	+1	known	in_frame_del	c.508_510	p.Q173in_frame_del	1.000:1.000:0.999	pfam_Mediator_Med15_met	pfam_Mediator_Med15_met	-	no_errors	MED15	HGNC	ENSG00000099917	tier1			59	0	0.00	20	3	13.04
MEIS1	0	genome.wustl.edu	37	2	66739317	66739317	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	66739317	66739317	C	T	SNP	MEIS1	ENST00000407092	human	ensembl	74_37	+1	known	missense	c.779	p.T260I	1.000	NULL	pfam_Homeobox_dom,pfam_Homeobox_KN_domain,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	MEIS1	HGNC	ENSG00000143995				69	0	0.00	26	3	10.34
MGAT5B	0	genome.wustl.edu	37	17	74928738	74928738	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	17	74928738	74928738	G	A	SNP	MGAT5B	ENST00000428789	human	ensembl	74_37	+1	known	missense	c.1336	p.D446N	0.999	NULL	superfamily_PyrdxlP-dep_Trfase	-	no_errors	MGAT5B	HGNC	ENSG00000167889	tier1	-	-	46	0	0.00	17	12	41.38
MIR3684	0	genome.wustl.edu	37	4	99918539	99918539	+	RNA	SNP	A	A	G			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	4	99918539	99918539	A	G	SNP	MIR3684	ENST00000579779	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.154	-	-	-	no_errors	MIR3684	HGNC	ENSG00000265213	tier1	-	-	65	0	0.00	20	16	44.44
MIR720	0	genome.wustl.edu	37	3	164059164	164059164	+	RNA	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	164059164	164059164	G	T	SNP	MIR720	ENST00000408828	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.051	-	-	-	no_errors	MIR720	HGNC	ENSG00000221755	tier1	-	-	123	0	0.00	54	17	23.94
MME	0	genome.wustl.edu	37	3	154889996	154889996	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	154889996	154889996	G	T	SNP	MME	ENST00000360490	human	ensembl	74_37	+1	known	missense	c.2071	p.A691S	1.000	pfam_Peptidase_M13_C	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,prints_Peptidase_M13_C	-	no_errors	MME	HGNC	ENSG00000196549	tier1	-	-	72	0	0.00	27	21	43.75
MPHOSPH8	0	genome.wustl.edu	37	13	20207922	20207922	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	13	20207922	20207922	G	A	SNP	MPHOSPH8	ENST00000414242	human	ensembl	74_37	+1	known	missense	c.34	p.A12T	0.001	NULL	pfam_Ankyrin_rpt,pfam_Chromo_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Chromo_domain/shadow	-	no_errors	MPHOSPH8	HGNC	ENSG00000196199	tier1	-	-	66	0	0.00	34	4	10.53
MRGPRX4	0	genome.wustl.edu	37	11	18195433	18195433	+	Silent	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	18195433	18195433	G	A	SNP	MRGPRX4	ENST00000314254	human	ensembl	74_37	+1	known	silent	c.630	p.P210	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	MRGPRX4	HGNC	ENSG00000179817	tier1	-	-	84	0	0.00	66	4	5.71
MRPS5	0	genome.wustl.edu	37	2	95753228	95753228	+	Frame_Shift_Del	DEL	C	C	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	95753228	95753228	C	-	DEL	MRPS5	ENST00000272418	human	ensembl	74_37	-1	known	frame_shift_del	c.1167	p.L391fs	0.000	NULL	pfam_Ribosomal_S5_C,pfam_Ribosomal_S5_N,superfamily_Ribosomal_S5_D2-typ_fold,pfscan_Ribosomal_S5_N	-	no_errors	MRPS5	HGNC	ENSG00000144029	tier1			58	0	0.00	34	2	5.56
MT-TC	0	genome.wustl.edu	37	MT	5814	5814	+	RNA	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	MT	5814	5814	T	C	SNP	MT-TC	ENST00000387405	human	ensembl	74_37	-1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-TC	HGNC	ENSG00000210140	tier1	rs200077222	-	170	0	0.00	45	107	70.39
MUC19	0	genome.wustl.edu	37	12	40917139	40917139	+	RNA	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	12	40917139	40917139	G	T	SNP	MUC19	ENST00000474954	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	MUC19	HGNC	ENSG00000205592	tier1	-	-	66	0	0.00	23	8	25.81
NCAPH	0	genome.wustl.edu	37	2	97008986	97008986	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	97008986	97008986	T	-	DEL	NCAPH	ENST00000240423	human	ensembl	74_37	+1	known	frame_shift_del	c.539	p.L183fs	0.998	pfam_Condensin_barren_su2,pirsf_Condensin_barren_su2	pfam_Condensin_barren_su2,pirsf_Condensin_barren_su2	-	no_errors	NCAPH	HGNC	ENSG00000121152	tier1			47	0	0.00	24	2	7.69
NOTCH1	0	genome.wustl.edu	37	9	139413049	139413049	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	9	139413049	139413049	G	A	SNP	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	missense	c.1093	p.R365C	1.000	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_Notch,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400	tier1	-	-	70	0	0.00	13	10	43.48
NRD1	0	genome.wustl.edu	37	1	52302076	52302076	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	52302076	52302076	C	T	SNP	NRD1	ENST00000354831	human	ensembl	74_37	-1	known	missense	c.799	p.A267T	0.988	superfamily_Metalloenz_LuxS/M16	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	NRD1	HGNC	ENSG00000078618				30	0	0.00	18	3	13.64
NUCB1	0	genome.wustl.edu	37	19	49404095	49404097	+	In_Frame_Del	DEL	GCT	GCT	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	GCT	GCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	19	49404095	49404097	GCT	-	DEL	NUCB1	ENST00000263273	human	ensembl	74_37	+1	known	in_frame_del	c.42_44	p.L18in_frame_del	0.000:0.000:0.000	NULL	pfscan_EF_hand_dom	-	no_errors	NUCB1	HGNC	ENSG00000104805	tier1			93	0	0.00	31	3	8.82
NUP98	0	genome.wustl.edu	37	11	3733897	3733897	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	3733897	3733897	G	T	SNP	NUP98	ENST00000324932	human	ensembl	74_37	-1	known	missense	c.2639	p.S880Y	0.949	NULL	pfam_Nup96,pfam_Peptidase_S59,superfamily_Peptidase_S59	-	no_errors	NUP98	HGNC	ENSG00000110713	tier1	-	-	73	0	0.00	19	3	13.64
OR2W5	0	genome.wustl.edu	37	1	247655201	247655201	+	RNA	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	247655201	247655201	C	T	SNP	OR2W5	ENST00000522351	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.469	-	-	-	no_errors	OR2W5	HGNC	ENSG00000203664	tier1	-	-	50	0	0.00	23	11	32.35
OR6T1	0	genome.wustl.edu	37	11	123813686	123813686	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	123813686	123813686	G	A	SNP	OR6T1	ENST00000321252	human	ensembl	74_37	-1	known	missense	c.860	p.P287L	0.974	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6T1	HGNC	ENSG00000181499				63	0	0.00	18	2	10.00
OR8H3	0	genome.wustl.edu	37	11	55889986	55889986	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	55889986	55889986	G	T	SNP	OR8H3	ENST00000313472	human	ensembl	74_37	+1	known	missense	c.138	p.M46I	0.102	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR8H3	HGNC	ENSG00000181761	tier1	-	-	115	0	0.00	56	17	23.29
OSBP	0	genome.wustl.edu	37	11	59376070	59376070	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	59376070	59376070	G	A	SNP	OSBP	ENST00000263847	human	ensembl	74_37	-1	known	missense	c.709	p.R237C	1.000	NULL	pfam_Oxysterol-bd,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBP	HGNC	ENSG00000110048	tier1	-	-	43	0	0.00	27	6	18.18
OSBPL6	0	genome.wustl.edu	37	2	179257143	179257143	+	Silent	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	179257143	179257143	C	T	SNP	OSBPL6	ENST00000315022	human	ensembl	74_37	+1	known	silent	c.2463	p.S821	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	OSBPL6	HGNC	ENSG00000079156				86	0	0.00	34	4	10.53
PAX8	0	genome.wustl.edu	37	2	114004339	114004339	+	Silent	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	114004339	114004339	G	T	SNP	PAX8	ENST00000429538	human	ensembl	74_37	-1	known	silent	c.183	p.I61	1.000	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	pfam_Paired_dom,pfam_Pax2_C,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	-	no_errors	PAX8	HGNC	ENSG00000125618	tier1	-	-	28	0	0.00	29	4	12.12
PCDHA7	0	genome.wustl.edu	37	5	140215472	140215472	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	5	140215472	140215472	C	A	SNP	PCDHA7	ENST00000525929	human	ensembl	74_37	+1	known	missense	c.1504	p.R502S	0.859	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA7	HGNC	ENSG00000204963	tier1	-	-	168	0	0.00	43	26	37.68
PDGFRA	0	genome.wustl.edu	37	4	55161318	55161318	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	4	55161318	55161318	T	C	SNP	PDGFRA	ENST00000257290	human	ensembl	74_37	+1	known	missense	c.3149	p.I1050T	0.603	pirsf_Tyr_kinase_CSF1/PDGF_rcpt	pirsf_Tyr_kinase_CSF1/PDGF_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	PDGFRA	HGNC	ENSG00000134853				82	0	0.00	27	2	6.90
PEAK1	0	genome.wustl.edu	37	15	77472942	77472942	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	15	77472942	77472942	C	T	SNP	PEAK1	ENST00000312493	human	ensembl	74_37	-1	known	missense	c.1327	p.V443I	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pfscan_Prot_kinase_dom	-	no_errors	PEAK1	HGNC	ENSG00000173517	tier1	-	-	71	0	0.00	26	18	40.91
PITPNM2	0	genome.wustl.edu	37	12	123498531	123498531	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	12	123498531	123498531	C	A	SNP	PITPNM2	ENST00000320201	human	ensembl	74_37	-1	known	missense	c.137	p.R46L	1.000	pfam_PI_transfer	pfam_PI_transfer,pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD,prints_PI_transfer	-	no_errors	PITPNM2	HGNC	ENSG00000090975	tier1	-	-	19	0	0.00	15	4	21.05
PITPNM3	0	genome.wustl.edu	37	17	6380423	6380423	+	Silent	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	17	6380423	6380423	C	T	SNP	PITPNM3	ENST00000262483	human	ensembl	74_37	-1	known	silent	c.1011	p.P337	0.934	NULL	pfam_DDHD,pfam_LNS2,superfamily_HAD-like_dom,smart_LNS2,pfscan_DDHD	-	no_errors	PITPNM3	HGNC	ENSG00000091622	tier1	-	-	46	0	0.00	24	4	14.29
PKD2L2	0	genome.wustl.edu	37	5	137230250	137230250	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	5	137230250	137230250	C	T	SNP	PKD2L2	ENST00000508883	human	ensembl	74_37	+1	known	missense	c.476	p.T159I	0.002	pfam_PKD1_2_channel	pfam_PKD1_2_channel,pfam_Ion_trans_dom,prints_PKD_2	-	no_errors	PKD2L2	HGNC	ENSG00000078795	tier1	-	-	85	0	0.00	23	10	30.30
PLCE1	0	genome.wustl.edu	37	10	95892039	95892039	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	10	95892039	95892039	G	T	SNP	PLCE1	ENST00000260766	human	ensembl	74_37	+1	known	missense	c.1315	p.G439C	0.655	superfamily_Ras_GEF_dom	pfam_PLipase_C_PInositol-sp_X_dom,pfam_PLipase_C_Pinositol-sp_Y,pfam_Ras-assoc,pfam_RasGRF_CDC25,pfam_PLipase_C_EF-hand-like,pfam_C2_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_Ras_GEF_dom,superfamily_C2_dom,smart_RasGRF_CDC25,smart_PLipase_C_PInositol-sp_X_dom,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,smart_Ras-assoc,pfscan_C2_dom,pfscan_Ras-assoc,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,pfscan_RasGRF_CDC25,prints_Pinositol_PLipase_C	-	no_errors	PLCE1	HGNC	ENSG00000138193	tier1	-	-	49	0	0.00	16	8	33.33
PLEKHA5	0	genome.wustl.edu	37	12	19408050	19408050	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	12	19408050	19408050	A	G	SNP	PLEKHA5	ENST00000317589	human	ensembl	74_37	+1	known	missense	c.383	p.Y128C	1.000	NULL	pfam_Pleckstrin_homology,superfamily_WW_dom,smart_WW_dom,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_WW_dom	-	no_errors	PLEKHA5	HGNC	ENSG00000052126	tier1	-	-	64	0	0.00	20	7	25.93
PLEKHB2	0	genome.wustl.edu	37	2	131904275	131904275	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	131904275	131904275	G	T	SNP	PLEKHB2	ENST00000403716	human	ensembl	74_37	+1	known	missense	c.598	p.D200Y	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PLEKHB2	HGNC	ENSG00000115762	tier1	-	-	58	0	0.00	52	4	7.14
PMM2	0	genome.wustl.edu	37	16	8895707	8895707	+	Frame_Shift_Del	DEL	A	A	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	16	8895707	8895707	A	-	DEL	PMM2	ENST00000268261	human	ensembl	74_37	+1	known	frame_shift_del	c.118	p.I41fs	1.000	pfam_PMM,pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_HAD-SF_hydro_IIB	pfam_PMM,pfam_HAD-like_dom,superfamily_HAD-like_dom,tigrfam_HAD-SF_hydro_IIB	-	no_errors	PMM2	HGNC	ENSG00000140650	tier1			75	0	0.00	29	2	6.45
POU3F3	0	genome.wustl.edu	37	2	105472850	105472852	+	In_Frame_Del	DEL	CGG	CGG	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	CGG	CGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	105472850	105472852	CGG	-	DEL	POU3F3	ENST00000361360	human	ensembl	74_37	+1	known	in_frame_del	c.882_884	p.G298in_frame_del	1.000:1.000:1.000	pirsf_Transcription_factor_POU	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pirsf_Transcription_factor_POU,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU3F3	HGNC	ENSG00000198914	tier1			36	0	0.00	9	2	18.18
PPP1R1A	0	genome.wustl.edu	37	12	54974789	54974789	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	12	54974789	54974789	T	C	SNP	PPP1R1A	ENST00000257905	human	ensembl	74_37	-1	known	missense	c.449	p.E150G	0.551	pfam_PPI_1DARPP-32	pfam_PPI_1DARPP-32	-	no_errors	PPP1R1A	HGNC	ENSG00000135447	tier1	-	-	127	0	0.00	36	10	21.74
PPP1R3A	0	genome.wustl.edu	37	7	113519505	113519505	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	7	113519505	113519505	G	T	SNP	PPP1R3A	ENST00000284601	human	ensembl	74_37	-1	known	missense	c.1642	p.P548T	0.000	NULL	pfam_CBM_21,pfscan_CBM_21	-	no_errors	PPP1R3A	HGNC	ENSG00000154415	tier1	-	-	64	0	0.00	25	5	16.67
PRPF40A	0	genome.wustl.edu	37	2	153572602	153572602	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	153572602	153572602	C	T	SNP	PRPF40A	ENST00000410080	human	ensembl	74_37	-1	known	missense	c.123	p.M41I	1.000	NULL	pfam_FF_domain,pfam_WW_dom,superfamily_FF_domain,superfamily_WW_dom,smart_WW_dom,smart_FF_domain,pfscan_WW_dom,prints_Antifreeze_1	-	no_errors	PRPF40A	HGNC	ENSG00000196504	tier1	-	-	30	0	0.00	23	4	14.81
PRPS2	0	genome.wustl.edu	37	X	12837706	12837706	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	X	12837706	12837706	G	C	SNP	PRPS2	ENST00000398491	human	ensembl	74_37	+1	known	missense	c.620	p.R207P	1.000	pfam_PRibTrfase_dom,tigrfam_Rib-P_diPkinase	pfam_PRibTrfase_dom,tigrfam_Rib-P_diPkinase	-	no_errors	PRPS2	HGNC	ENSG00000101911				22	0	0.00	8	2	20.00
PRSS22	0	genome.wustl.edu	37	16	2906218	2906218	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	16	2906218	2906218	C	T	SNP	PRSS22	ENST00000161006	human	ensembl	74_37	-1	known	missense	c.146	p.R49Q	0.704	superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	PRSS22	HGNC	ENSG00000005001	tier1	-	-	61	0	0.00	16	6	27.27
PSG2	0	genome.wustl.edu	37	19	43585989	43585990	+	RNA	INS	-	-	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	19	43585989	43585990	-	T	INS	PSG2	ENST00000491995	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.004	-	-	-	no_errors	PSG2	HGNC	ENSG00000242221	tier1			24	0	0.00	2	2	50.00
PTPRJ	0	genome.wustl.edu	37	11	48149405	48149405	+	Silent	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	48149405	48149405	C	T	SNP	PTPRJ	ENST00000418331	human	ensembl	74_37	+1	known	silent	c.1167	p.S389	0.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRJ	HGNC	ENSG00000149177				51	0	0.00	18	2	10.00
PYGB	0	genome.wustl.edu	37	20	25228820	25228820	+	Silent	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	20	25228820	25228820	G	T	SNP	PYGB	ENST00000216962	human	ensembl	74_37	+1	known	silent	c.6	p.A2	0.289	NULL	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGB	HGNC	ENSG00000100994	tier1	-	-	62	0	0.00	24	4	14.29
QRICH1	0	genome.wustl.edu	37	3	49094314	49094316	+	In_Frame_Del	DEL	TGC	TGC	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	TGC	TGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	49094314	49094316	TGC	-	DEL	QRICH1	ENST00000357496	human	ensembl	74_37	-1	known	in_frame_del	c.1319_1317	p.Q440in_frame_del	1.000:1.000:1.000	NULL	pfam_DUF3504,superfamily_DEATH-like_dom	-	no_errors	QRICH1	HGNC	ENSG00000198218	tier1			43	0	0.00	15	2	11.76
RBM26	0	genome.wustl.edu	37	13	79928659	79928659	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	13	79928659	79928659	T	A	SNP	RBM26	ENST00000438724	human	ensembl	74_37	-1	known	missense	c.1901	p.Q634L	1.000	NULL	pfam_PWI_dom,superfamily_PWI_dom,smart_Znf_CCCH,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM26	HGNC	ENSG00000139746				34	0	0.00	10	4	28.57
RELL1	0	genome.wustl.edu	37	4	37650945	37650945	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	4	37650945	37650945	G	A	SNP	RELL1	ENST00000314117	human	ensembl	74_37	-1	known	missense	c.266	p.T89I	0.994	pfam_TNF_rcpt_RELT	pfam_TNF_rcpt_RELT	-	no_errors	RELL1	HGNC	ENSG00000181826				72	0	0.00	19	2	9.52
RFX7	0	genome.wustl.edu	37	15	56386135	56386135	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	15	56386135	56386135	G	A	SNP	RFX7	ENST00000423270	human	ensembl	74_37	-1	known	missense	c.3791	p.A1264V	1.000	NULL	pfam_DNA-bd_RFX	-	no_errors	RFX7	HGNC	ENSG00000181827	tier1	-	-	45	0	0.00	12	3	20.00
RICTOR	0	genome.wustl.edu	37	5	38942960	38942960	+	Nonsense_Mutation	SNP	A	A	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	5	38942960	38942960	A	C	SNP	RICTOR	ENST00000296782	human	ensembl	74_37	-1	known	nonsense	c.5099	p.L1700*	1.000	NULL	superfamily_ARM-type_fold	-	no_errors	RICTOR	HGNC	ENSG00000164327	tier1	-	-	82	0	0.00	54	9	14.29
ROCK1P1	0	genome.wustl.edu	37	18	121145	121147	+	RNA	DEL	TTG	TTG	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	TTG	TTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	18	121145	121147	TTG	-	DEL	ROCK1P1	ENST00000608049	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.605:0.625:0.630	-	-	-	no_errors	ROCK1P1	HGNC	ENSG00000263006	tier1			21	0	0.00	15	4	21.05
RYR2	0	genome.wustl.edu	37	1	237811850	237811850	+	Silent	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	237811850	237811850	C	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	silent	c.7443	p.F2481	1.000	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626				87	0	0.00	27	3	10.00
S100A8	0	genome.wustl.edu	37	1	153362902	153362902	+	Missense_Mutation	SNP	A	A	G			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	153362902	153362902	A	G	SNP	S100A8	ENST00000368732	human	ensembl	74_37	-1	known	missense	c.110	p.L37S	0.023	pfam_S100_Ca-bd_sub	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	S100A8	HGNC	ENSG00000143546	tier1	-	-	51	0	0.00	18	5	21.74
SCN7A	0	genome.wustl.edu	37	2	167327160	167327160	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	167327160	167327160	G	T	SNP	SCN7A	ENST00000409855	human	ensembl	74_37	-1	known	missense	c.629	p.T210N	0.535	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN7A	HGNC	ENSG00000136546				83	0	0.00	56	3	5.08
SGK494	0	genome.wustl.edu	37	17	26938412	26938412	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	17	26938412	26938412	T	-	DEL	SGK494	ENST00000301037	human	ensembl	74_37	-1	known	frame_shift_del	c.899	p.K300fs	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	SGK494	Clone_based_vega_gene	ENSG00000167524	tier1			51	0	0.00	15	2	11.76
SGOL2	0	genome.wustl.edu	37	2	201437233	201437233	+	Missense_Mutation	SNP	A	A	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	201437233	201437233	A	T	SNP	SGOL2	ENST00000357799	human	ensembl	74_37	+1	known	missense	c.2164	p.I722L	0.957	NULL	NULL	-	no_errors	SGOL2	HGNC	ENSG00000163535	tier1	-	-	45	0	0.00	20	5	20.00
SI	0	genome.wustl.edu	37	3	164700808	164700808	+	Silent	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	164700808	164700808	T	C	SNP	SI	ENST00000264382	human	ensembl	74_37	-1	known	silent	c.5229	p.V1743	0.514	NULL	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	SI	HGNC	ENSG00000090402	tier1	-	-	64	0	0.00	28	8	22.22
SI	0	genome.wustl.edu	37	3	164709998	164709998	+	Silent	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	164709998	164709998	G	A	SNP	SI	ENST00000264382	human	ensembl	74_37	-1	known	silent	c.4950	p.Y1650	0.141	pfam_Glyco_hydro_31	pfam_Glyco_hydro_31,pfam_P_trefoil,superfamily_Glycoside_hydrolase_SF,superfamily_Gal_mutarotase_SF_dom,smart_P_trefoil	-	no_errors	SI	HGNC	ENSG00000090402	tier1	-	-	68	0	0.00	21	8	27.59
SLC12A5	0	genome.wustl.edu	37	20	44673759	44673759	+	Frame_Shift_Del	DEL	G	G	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	20	44673759	44673759	G	-	DEL	SLC12A5	ENST00000454036	human	ensembl	74_37	+1	known	frame_shift_del	c.1618	p.G540fs	1.000	pfam_AA-permease/SLC12A_dom,tigrfam_Na/K/Cl_cotransptS	pfam_AA-permease/SLC12A_dom,prints_KCL_cotranspt,tigrfam_Na/K/Cl_cotransptS	-	no_errors	SLC12A5	HGNC	ENSG00000124140	tier1			40	0	0.00	12	2	14.29
SLC6A12	0	genome.wustl.edu	37	12	306657	306657	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	12	306657	306657	C	T	SNP	SLC6A12	ENST00000359674	human	ensembl	74_37	-1	known	missense	c.961	p.A321T	0.936	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_betaine	-	no_errors	SLC6A12	HGNC	ENSG00000111181	tier1	-	-	46	0	0.00	27	5	15.62
SLC7A6	0	genome.wustl.edu	37	16	68331203	68331203	+	Frame_Shift_Del	DEL	A	A	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	16	68331203	68331203	A	-	DEL	SLC7A6	ENST00000219343	human	ensembl	74_37	+1	known	frame_shift_del	c.1520	p.K509fs	0.821	NULL	pfam_AA-permease/SLC12A_dom,pirsf_AA/rel_permease1	-	no_errors	SLC7A6	HGNC	ENSG00000103064	tier1			62	0	0.00	30	3	9.09
SMTN	0	genome.wustl.edu	37	22	31489516	31489516	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	22	31489516	31489516	C	A	SNP	SMTN	ENST00000404574	human	ensembl	74_37	+1	putative	missense	c.83	p.A28E	0.003	NULL	pfam_CH-domain,pfam_Smoothelin,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	-	no_errors	SMTN	HGNC	ENSG00000183963	tier1	-	-	41	0	0.00	24	7	22.58
SNCG	0	genome.wustl.edu	37	10	88722801	88722801	+	RNA	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	10	88722801	88722801	C	A	SNP	SNCG	ENST00000483064	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SNCG	HGNC	ENSG00000173267	tier1	-	-	41	0	0.00	12	6	33.33
SNHG1	0	genome.wustl.edu	37	11	62620423	62620423	+	RNA	DEL	C	C	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	62620423	62620423	C	-	DEL	SNHG1	ENST00000384756	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.992	-	-	-	no_errors	SNHG1	HGNC	ENSG00000255717	tier1			43	0	0.00	35	2	5.41
SOX11	0	genome.wustl.edu	37	2	5833526	5833528	+	In_Frame_Del	DEL	GAC	GAC	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	GAC	GAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	5833526	5833528	GAC	-	DEL	SOX11	ENST00000322002	human	ensembl	74_37	+1	known	in_frame_del	c.673_675	p.D228in_frame_del	1.000:1.000:0.999	pirsf_SOX-12/11/4a	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pirsf_SOX-12/11/4a,pfscan_HMG_box_dom	-	no_errors	SOX11	HGNC	ENSG00000176887	tier1			26	0	0.00	10	4	28.57
SOX12	0	genome.wustl.edu	37	20	307342	307343	+	Frame_Shift_Ins	INS	-	-	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	20	307342	307343	-	C	INS	SOX12	ENST00000342665	human	ensembl	74_37	+1	known	frame_shift_ins	c.774_775	p.G260fs	0.997:1.000	pirsf_SOX-12/11/4a	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pirsf_SOX-12/11/4a,pfscan_HMG_box_dom	-	no_errors	SOX12	HGNC	ENSG00000177732	tier1			30	0	0.00	6	2	25.00
SPTY2D1-AS1	0	genome.wustl.edu	37	11	18621528	18621528	+	RNA	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	18621528	18621528	C	T	SNP	SPTY2D1-AS1	ENST00000501599	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.963	-	-	-	no_errors	SPTY2D1-AS1	HGNC	ENSG00000247595	tier1	-	-	84	0	0.00	40	30	42.25
STX10	0	genome.wustl.edu	37	19	13255457	13255457	+	Missense_Mutation	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	19	13255457	13255457	C	A	SNP	STX10	ENST00000587230	human	ensembl	74_37	-1	known	missense	c.607	p.D203Y	1.000	pfam_T_SNARE_dom,smart_T_SNARE_dom,pfscan_T_SNARE_dom	pfam_Syntaxin-6_N,pfam_T_SNARE_dom,superfamily_t-SNARE,smart_T_SNARE_dom,pfscan_T_SNARE_dom	-	no_errors	STX10	HGNC	ENSG00000104915	tier1	-	-	25	0	0.00	13	5	27.78
SYTL3	0	genome.wustl.edu	37	6	159086477	159086477	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	6	159086477	159086477	C	T	SNP	SYTL3	ENST00000297239	human	ensembl	74_37	+1	known	missense	c.161	p.T54M	0.000	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	pfam_C2_dom,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,smart_C2_dom,pfscan_C2_dom,pfscan_Znf_FYVE-typ	-	no_errors	SYTL3	HGNC	ENSG00000164674				38	0	0.00	25	2	7.41
TECTA	0	genome.wustl.edu	37	11	121016684	121016684	+	Frame_Shift_Del	DEL	T	T	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	121016684	121016684	T	-	DEL	TECTA	ENST00000264037	human	ensembl	74_37	+1	known	frame_shift_del	c.3964	p.F1322fs	0.990	pfam_Unchr_dom_Cys-rich,smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_ZP_dom,pfam_Nidogen_extracell_dom,pfam_TIL_dom,superfamily_TIL_dom,smart_Nidogen_extracell_dom,smart_VWC_out,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_EG-like_dom,smart_ZP_dom,pfscan_ZP_dom	-	no_errors	TECTA	HGNC	ENSG00000109927	tier1			48	0	0.00	11	2	15.38
TERT	0	genome.wustl.edu	37	5	1279450	1279450	+	Missense_Mutation	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	5	1279450	1279450	G	A	SNP	TERT	ENST00000310581	human	ensembl	74_37	-1	known	missense	c.2086	p.R696C	0.732	pfscan_RVT	pfam_Telomerase_RBD,pfam_RVT,smart_Telomerase_RBD,pfscan_RVT,prints_Telomerase_RT	-	no_errors	TERT	HGNC	ENSG00000164362	tier1	-	-	57	0	0.00	27	8	22.86
TFCP2	0	genome.wustl.edu	37	12	51512514	51512514	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	12	51512514	51512514	C	T	SNP	TFCP2	ENST00000257915	human	ensembl	74_37	-1	known	missense	c.164	p.S55N	0.997	NULL	pfam_CP2,superfamily_SAM/pointed	-	no_errors	TFCP2	HGNC	ENSG00000135457				84	0	0.00	34	2	5.56
TMEM131	0	genome.wustl.edu	37	2	98418927	98418928	+	Frame_Shift_Ins	INS	-	-	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	98418927	98418928	-	A	INS	TMEM131	ENST00000186436	human	ensembl	74_37	-1	known	frame_shift_ins	c.2615_2614	p.S872fs	1.000:1.000	NULL	pfam_DUF3651_TMEM131	-	no_errors	TMEM131	HGNC	ENSG00000075568	tier1			76	0	0.00	29	14	32.56
TMPRSS6	0	genome.wustl.edu	37	22	37470670	37470670	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	22	37470670	37470670	C	T	SNP	TMPRSS6	ENST00000381792	human	ensembl	74_37	-1	known	missense	c.1421	p.G474D	1.000	pirsf_Pept_S1A_matriptase-2,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,prints_LDrepeatLR_classA_rpt,pfscan_LDrepeatLR_classA_rpt	pirsf_Pept_S1A_matriptase-2,pfam_Peptidase_S1,pfam_LDrepeatLR_classA_rpt,pfam_SEA_dom,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_Peptidase_S1,prints_Peptidase_S1A,prints_LDrepeatLR_classA_rpt,pfscan_CUB_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_Peptidase_S1	-	no_errors	TMPRSS6	HGNC	ENSG00000187045	tier1	-	-	33	0	0.00	21	4	16.00
TNXB	0	genome.wustl.edu	37	6	32014070	32014070	+	Silent	SNP	G	G	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	6	32014070	32014070	G	C	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	silent	c.10482	p.A3494	0.071	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	tier1	-	-	84	0	0.00	28	14	33.33
TNXB	0	genome.wustl.edu	37	6	32014071	32014071	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	6	32014071	32014071	G	T	SNP	TNXB	ENST00000375247	human	ensembl	74_37	-1	known	missense	c.10481	p.A3494D	0.245	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_EG-like_dom,pfscan_Fibronectin_type3	-	no_errors	TNXB	HGNC	ENSG00000168477	tier1	-	-	84	0	0.00	28	14	33.33
TP53	0	genome.wustl.edu	37	17	7578290	7578290	+	Splice_Site	SNP	C	C	G			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	17	7578290	7578290	C	G	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	splice_site	c.560-1	e5-1	1.000	-	-	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	53	0	0.00	21	5	19.23
TP53	0	genome.wustl.edu	37	17	7577084	7577084	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	17	7577084	7577084	T	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.854	p.E285V	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510				52	0	0.00	22	4	15.38
TPCN1	0	genome.wustl.edu	37	12	113704096	113704098	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	12	113704096	113704098	CTG	-	DEL	TPCN1	ENST00000541517	human	ensembl	74_37	+1	known	in_frame_del	c.565_567	p.L192in_frame_del	1.000:1.000:1.000	NULL	pfam_Ion_trans_dom	-	no_errors	TPCN1	HGNC	ENSG00000186815	tier1			48	0	0.00	25	3	10.71
TRIM25	0	genome.wustl.edu	37	17	54978858	54978858	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	17	54978858	54978858	T	A	SNP	TRIM25	ENST00000316881	human	ensembl	74_37	-1	known	missense	c.1009	p.I337F	0.000	NULL	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM25	HGNC	ENSG00000121060	tier1	-	-	60	0	0.00	27	12	30.77
TRIM55	0	genome.wustl.edu	37	8	67066571	67066571	+	Splice_Site	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	8	67066571	67066571	T	C	SNP	TRIM55	ENST00000315962	human	ensembl	74_37	+1	known	splice_site	c.1524+2	e9+2	1.000	-	-	-	no_errors	TRIM55	HGNC	ENSG00000147573	tier1	-	-	25	0	0.00	10	3	23.08
TTC40	0	genome.wustl.edu	37	10	134690433	134690433	+	Silent	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	10	134690433	134690433	T	C	SNP	TTC40	ENST00000368582	human	ensembl	74_37	-1	known	silent	c.4245	p.E1415	0.006	NULL	NULL	-	no_errors	TTC40	HGNC	ENSG00000171811	tier1	-	-	59	0	0.00	15	6	28.57
TTN	0	genome.wustl.edu	37	2	179585761	179585761	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	179585761	179585761	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.19253	p.S6418Y	0.996	pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657				28	0	0.00	16	2	11.11
TTR	0	genome.wustl.edu	37	18	29175162	29175162	+	Missense_Mutation	SNP	G	G	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	18	29175162	29175162	G	C	SNP	TTR	ENST00000237014	human	ensembl	74_37	+1	known	missense	c.280	p.D94H	1.000	pfam_Transthyretin/HIU_hydrolase_SF,superfamily_Transthyretin/HIU_hydrolase_SF,smart_Transthyretin/HIU_hydrolase_SF,prints_Transthyretin/HIU_hydrolase	pfam_Transthyretin/HIU_hydrolase_SF,superfamily_Transthyretin/HIU_hydrolase_SF,smart_Transthyretin/HIU_hydrolase_SF,prints_Transthyretin/HIU_hydrolase	-	no_errors	TTR	HGNC	ENSG00000118271				87	0	0.00	36	2	5.26
TUB	0	genome.wustl.edu	37	11	8118318	8118318	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	8118318	8118318	C	T	SNP	TUB	ENST00000305253	human	ensembl	74_37	+1	known	missense	c.817	p.R273C	1.000	prints_Tubby_N	pfam_Tubby_C,superfamily_Tubby_C-like,prints_Tubby_N,prints_Tubby_C	-	no_errors	TUB	HGNC	ENSG00000166402	tier1	-	-	37	0	0.00	11	4	26.67
UBA3	0	genome.wustl.edu	37	3	69105806	69105806	+	Missense_Mutation	SNP	T	T	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	69105806	69105806	T	A	SNP	UBA3	ENST00000361055	human	ensembl	74_37	-1	known	missense	c.1040	p.D347V	1.000	superfamily_Molybdenum_cofac_synth_MoeB	pfam_ThiF_NAD_FAD-bd,pfam_E2_binding,pfam_UBact_repeat,pfam_Ubiquitin-activating_enzyme,superfamily_Molybdenum_cofac_synth_MoeB	-	no_errors	UBA3	HGNC	ENSG00000144744	tier1	-	-	45	0	0.00	14	8	36.36
UBN2	0	genome.wustl.edu	37	7	138969300	138969300	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	7	138969300	138969300	G	T	SNP	UBN2	ENST00000473989	human	ensembl	74_37	+1	known	missense	c.3649	p.V1217L	1.000	NULL	NULL	-	no_errors	UBN2	HGNC	ENSG00000157741	tier1	-	-	31	0	0.00	32	4	11.11
UNC13A	0	genome.wustl.edu	37	19	17759280	17759280	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	19	17759280	17759280	G	T	SNP	UNC13A	ENST00000428389	human	ensembl	74_37	-1	known	missense	c.2040	p.H680Q	1.000	pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd	pfam_Munc13_subgr_dom-2,pfam_C2_dom,pfam_Ca-dep_secretion_activator,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13A	HGNC	ENSG00000130477	tier1	-	-	54	0	0.00	22	5	18.52
UNC5B	0	genome.wustl.edu	37	10	73056419	73056419	+	Frame_Shift_Del	DEL	A	A	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	10	73056419	73056419	A	-	DEL	UNC5B	ENST00000335350	human	ensembl	74_37	+1	known	frame_shift_del	c.2410	p.T804fs	1.000	NULL	pfam_ZU5,pfam_Ig_I-set,pfam_Death_domain,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5B	HGNC	ENSG00000107731	tier1			48	0	0.00	17	2	10.53
USP43	0	genome.wustl.edu	37	17	9631606	9631606	+	Missense_Mutation	SNP	C	C	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	17	9631606	9631606	C	T	SNP	USP43	ENST00000285199	human	ensembl	74_37	+1	known	missense	c.2671	p.P891S	0.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP43	HGNC	ENSG00000154914				30	0	0.00	19	3	13.64
VGLL3	0	genome.wustl.edu	37	3	87027857	87027859	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	3	87027857	87027859	CTC	-	DEL	VGLL3	ENST00000398399	human	ensembl	74_37	-1	known	in_frame_del	c.222_220	p.E74in_frame_del	1.000:1.000:1.000	NULL	pfam_Vg_Tdu,smart_TDU_repeat	-	no_errors	VGLL3	HGNC	ENSG00000206538	tier1			47	0	0.00	16	3	15.79
VPS54	0	genome.wustl.edu	37	2	64189243	64189243	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	2	64189243	64189243	G	T	SNP	VPS54	ENST00000272322	human	ensembl	74_37	-1	known	missense	c.959	p.A320E	1.000	pfam_Vacuolar_sorting-assoc_54	pfam_Vps54,pfam_Vacuolar_sorting-assoc_54	-	no_errors	VPS54	HGNC	ENSG00000143952				102	0	0.00	55	3	5.08
WAC	0	genome.wustl.edu	37	10	28899729	28899729	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	10	28899729	28899729	G	T	SNP	WAC	ENST00000354911	human	ensembl	74_37	+1	known	missense	c.1267	p.A423S	1.000	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WAC	HGNC	ENSG00000095787				76	0	0.00	31	2	6.06
WNK1	0	genome.wustl.edu	37	12	970189	970189	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	12	970189	970189	G	T	SNP	WNK1	ENST00000530271	human	ensembl	74_37	+1	known	missense	c.1631	p.G544V	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Kinase_OSR1/WNK_CCT,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	WNK1	HGNC	ENSG00000060237	tier1	-	-	66	0	0.00	48	4	7.69
XRRA1	0	genome.wustl.edu	37	11	74656099	74656099	+	RNA	DEL	T	T	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	11	74656099	74656099	T	-	DEL	XRRA1	ENST00000524430	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	XRRA1	HGNC	ENSG00000166435	tier1			52	0	0.00	30	5	14.29
ZFHX4	0	genome.wustl.edu	37	8	77775449	77775451	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	8	77775449	77775451	CCT	-	DEL	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	in_frame_del	c.9499_9501	p.P3170in_frame_del	1.000:0.995:0.658	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1			50	0	0.00	24	3	11.11
ZMYND19	0	genome.wustl.edu	37	9	140482240	140482240	+	Silent	SNP	A	A	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	9	140482240	140482240	A	T	SNP	ZMYND19	ENST00000298585	human	ensembl	74_37	-1	known	silent	c.147	p.A49	1.000	NULL	pfam_Znf_MYND,pfscan_Znf_MYND	-	no_errors	ZMYND19	HGNC	ENSG00000165724	tier1	-	-	93	0	0.00	38	17	30.91
ZNF136	0	genome.wustl.edu	37	19	12298428	12298428	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	19	12298428	12298428	G	T	SNP	ZNF136	ENST00000343979	human	ensembl	74_37	+1	known	missense	c.1235	p.R412I	0.999	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF136	HGNC	ENSG00000196646				65	0	0.00	39	3	7.14
ZNF254	0	genome.wustl.edu	37	19	24310230	24310230	+	Silent	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	19	24310230	24310230	C	A	SNP	ZNF254	ENST00000357002	human	ensembl	74_37	+1	known	silent	c.1428	p.T476	0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF254	HGNC	ENSG00000213096				68	0	0.00	46	10	17.86
ZNF3	0	genome.wustl.edu	37	7	99672873	99672873	+	Silent	SNP	G	G	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	7	99672873	99672873	G	A	SNP	ZNF3	ENST00000299667	human	ensembl	74_37	-1	known	silent	c.156	p.T52	0.910	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF3	HGNC	ENSG00000166526	tier1	-	-	45	0	0.00	11	5	31.25
ZNF443	0	genome.wustl.edu	37	19	12541473	12541473	+	Nonsense_Mutation	SNP	C	C	A			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	19	12541473	12541473	C	A	SNP	ZNF443	ENST00000301547	human	ensembl	74_37	-1	known	nonsense	c.1513	p.E505*	0.007	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF443	HGNC	ENSG00000180855	tier1	-	-	59	0	0.00	20	4	16.67
ZNF600	0	genome.wustl.edu	37	19	53269156	53269156	+	Missense_Mutation	SNP	G	G	T			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	19	53269156	53269156	G	T	SNP	ZNF600	ENST00000338230	human	ensembl	74_37	-1	known	missense	c.1853	p.A618D	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF600	HGNC	ENSG00000189190	tier1	-	-	128	0	0.00	60	4	6.25
ZNF644	0	genome.wustl.edu	37	1	91406514	91406514	+	Missense_Mutation	SNP	T	T	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	91406514	91406514	T	C	SNP	ZNF644	ENST00000337393	human	ensembl	74_37	-1	known	missense	c.397	p.K133E	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF644	HGNC	ENSG00000122482	tier1	-	-	31	0	0.00	4	5	55.56
ZNF703	0	genome.wustl.edu	37	8	37555934	37555936	+	In_Frame_Del	DEL	CGC	CGC	-			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	CGC	CGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	8	37555934	37555936	CGC	-	DEL	ZNF703	ENST00000331569	human	ensembl	74_37	+1	known	in_frame_del	c.1515_1517	p.A509in_frame_del	0.974:0.996:0.997	NULL	pfam_Tscrpt_rep_NocA-like,pfscan_Znf_C2H2	-	no_errors	ZNF703	HGNC	ENSG00000183779	tier1			25	0	0.00	7	3	30.00
ZZZ3	0	genome.wustl.edu	37	1	78030077	78030077	+	RNA	SNP	A	A	C			TCGA-LN-A9FR-01A-11D-A387-09	TCGA-LN-A9FR-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	f234ab6a-0cad-432f-948a-6728266f3b1c	4974181f-23a7-4b20-8aef-ece89709a24e	1	78030077	78030077	A	C	SNP	ZZZ3	ENST00000481346	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.193	-	-	-	no_errors	ZZZ3	HGNC	ENSG00000036549	tier1	-	-	12	0	0.00	5	7	58.33
