Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AARS2	0	genome.wustl.edu	37	6	44274734	44274734	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	44274734	44274734	G	T	SNP	AARS2	ENST00000244571	human	ensembl	74_37	-1	known	missense	c.1075	p.R359S	1.000	pfam_Ala-tRNA-synth_IIc_N,superfamily_Ala-tRNA-ligase_IIc_anticod-bd,prints_Ala-tRNA-lgiase_IIc,pfscan_Ala-tRNA-synth_IIc_core,tigrfam_Ala-tRNA-lgiase_IIc	pfam_Ala-tRNA-synth_IIc_N,pfam_tRNA_SAD,superfamily_Ala-tRNA-ligase_IIc_anticod-bd,superfamily_Thr/Ala-tRNA-synth_IIc_edit,smart_tRNA_SAD,prints_Ala-tRNA-lgiase_IIc,pfscan_Ala-tRNA-synth_IIc_core,tigrfam_Ala-tRNA-lgiase_IIc	-	no_errors	AARS2	HGNC	ENSG00000124608				56	0	0.00	29	2	6.45
AATK	0	genome.wustl.edu	37	17	79094874	79094874	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	79094874	79094874	C	T	SNP	AATK	ENST00000326724	human	ensembl	74_37	-1	known	silent	c.2862	p.A954	0.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	AATK	HGNC	ENSG00000181409				35	0	0.00	32	2	5.88
ACACB	0	genome.wustl.edu	37	12	109703053	109703053	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	12	109703053	109703053	C	T	SNP	ACACB	ENST00000338432	human	ensembl	74_37	+1	known	missense	c.7081	p.R2361C	1.000	NULL	pfam_AcCoA_COase_cen,pfam_Carboxyl_trans,pfam_CbamoylP_synth_lsu-like_ATP-bd,pfam_CarbamoylP_synth_lsu_N,pfam_Biotin_COase_C,pfam_Biotin_lipoyl,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,superfamily_Single_hybrid_motif,smart_Biotin_COase_C,pfscan_ATP-grasp,pfscan_Biotin_carboxylation_dom,pfscan_COA_CT_N,pfscan_COA_CT_C,pfscan_Biotin_lipoyl	-	no_errors	ACACB	HGNC	ENSG00000076555	tier1	-	-	48	0	0.00	44	9	16.98
ACSM3	0	genome.wustl.edu	37	16	20808257	20808257	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	20808257	20808257	G	T	SNP	ACSM3	ENST00000289416	human	ensembl	74_37	+1	known	missense	c.1724	p.R575I	1.000	NULL	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM3	HGNC	ENSG00000005187	tier1	-	-	68	0	0.00	47	4	7.84
ACTN2	0	genome.wustl.edu	37	1	236911004	236911004	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	236911004	236911004	C	T	SNP	ACTN2	ENST00000366578	human	ensembl	74_37	+1	known	missense	c.1444	p.R482W	0.996	pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_CH-domain,pfam_EF-hand_Ca_insen,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_EF_hand_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	ACTN2	HGNC	ENSG00000077522	tier1	rs199604590	-	45	0	0.00	17	27	61.36
ACY3	0	genome.wustl.edu	37	11	67410228	67410228	+	Silent	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	11	67410228	67410228	G	T	SNP	ACY3	ENST00000255082	human	ensembl	74_37	-1	known	silent	c.927	p.P309	0.000	pirsf_Aspartoacylase	pfam_Aste_AspA,pirsf_Aspartoacylase	-	no_errors	ACY3	HGNC	ENSG00000132744	tier1	-	-	61	0	0.00	55	4	6.78
ADAMTS2	0	genome.wustl.edu	37	5	178581177	178581177	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	5	178581177	178581177	C	T	SNP	ADAMTS2	ENST00000251582	human	ensembl	74_37	-1	known	missense	c.1255	p.D419N	0.998	pfam_Peptidase_M12B,pfscan_Peptidase_M12B	pfam_Peptidase_M12B_N,pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_Peptidase_M12B,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt,pfscan_Peptidase_M12B,prints_Pept_M12B_ADAM-TS2,prints_Peptidase_M12B_ADAM-TS	-	no_errors	ADAMTS2	HGNC	ENSG00000087116	tier1	-	-	21	0	0.00	2	16	88.89
AEBP1	0	genome.wustl.edu	37	7	44149310	44149310	+	RNA	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	7	44149310	44149310	G	A	SNP	AEBP1	ENST00000454218	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	AEBP1	HGNC	ENSG00000106624	tier1	-	-	49	0	0.00	66	18	21.43
AKAP3	0	genome.wustl.edu	37	12	4737076	4737076	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	12	4737076	4737076	G	A	SNP	AKAP3	ENST00000228850	human	ensembl	74_37	-1	known	missense	c.992	p.S331L	0.992	pfam_AKAP_110_C,smart_AKAP_110	pfam_AKAP_110_C,pfam_RII_binding_1,smart_AKAP_110	-	no_errors	AKAP3	HGNC	ENSG00000111254	tier1	-	-	37	0	0.00	41	10	19.61
ALDOC	0	genome.wustl.edu	37	17	26901110	26901110	+	Silent	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	26901110	26901110	A	G	SNP	ALDOC	ENST00000226253	human	ensembl	74_37	-1	known	silent	c.774	p.R258	0.999	pfam_Aldolase_I	pfam_Aldolase_I	-	no_errors	ALDOC	HGNC	ENSG00000109107	tier1	-	-	36	0	0.00	32	14	30.43
ALX1	0	genome.wustl.edu	37	12	85674198	85674198	+	Missense_Mutation	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	12	85674198	85674198	C	A	SNP	ALX1	ENST00000316824	human	ensembl	74_37	+1	known	missense	c.159	p.F53L	1.000	NULL	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	ALX1	HGNC	ENSG00000180318				35	0	0.00	31	2	6.06
ANK1	0	genome.wustl.edu	37	8	41554052	41554052	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	8	41554052	41554052	C	T	SNP	ANK1	ENST00000396942	human	ensembl	74_37	-1	known	missense	c.2789	p.R930H	1.000	pfam_ZU5,smart_ZU5,pfscan_ZU5	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK1	HGNC	ENSG00000029534	tier1	-	-	110	0	0.00	44	14	23.33
ARHGAP25	0	genome.wustl.edu	37	2	69046254	69046254	+	Splice_Site	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	69046254	69046254	G	T	SNP	ARHGAP25	ENST00000409202	human	ensembl	74_37	+1	known	splice_site	c.1004-1	e9-1	1.000	-	-	-	no_errors	ARHGAP25	HGNC	ENSG00000163219	tier1	-	-	66	0	0.00	59	4	6.35
ARHGEF4	0	genome.wustl.edu	37	2	131674056	131674056	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	131674056	131674056	C	T	SNP	ARHGEF4	ENST00000409359	human	ensembl	74_37	+1	putative	missense	c.1547	p.P516L	0.000	NULL	NULL	-	no_errors	ARHGEF4	HGNC	ENSG00000136002	tier1	-	-	17	0	0.00	13	7	35.00
ASIC2	0	genome.wustl.edu	37	17	31439044	31439044	+	Silent	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	31439044	31439044	G	T	SNP	ASIC2	ENST00000225823	human	ensembl	74_37	-1	known	silent	c.750	p.G250	1.000	pfam_Na+channel_ASC,tigrfam_EnaC	pfam_Na+channel_ASC,prints_Na+channel_ASC,tigrfam_EnaC	-	no_errors	ASIC2	HGNC	ENSG00000108684	tier1	-	-	52	0	0.00	75	4	5.06
ATIC	0	genome.wustl.edu	37	2	216214359	216214359	+	Frame_Shift_Del	DEL	T	T	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	216214359	216214359	T	-	DEL	ATIC	ENST00000236959	human	ensembl	74_37	+1	known	frame_shift_del	c.1760	p.R588fs	0.999	superfamily_Cytidine_deaminase-like,pirsf_AICARFT_IMPCHas	pfam_AICARFT_IMPCHas,pfam_MGS-like_dom,superfamily_Cytidine_deaminase-like,superfamily_MGS-like_dom,smart_MGS-like_dom,smart_AICARFT_IMPCHas,pirsf_AICARFT_IMPCHas,tigrfam_AICARFT_IMPCHas	-	no_errors	ATIC	HGNC	ENSG00000138363	tier1			48	0	0.00	35	2	5.41
ATP2B2	0	genome.wustl.edu	37	3	10400462	10400462	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	10400462	10400462	C	T	SNP	ATP2B2	ENST00000352432	human	ensembl	74_37	-1	known	silent	c.2049	p.P683	0.014	superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,tigrfam_ATPase_P-typ_Ca-transp_plasma	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B2	HGNC	ENSG00000157087	tier1	-	-	70	0	0.00	44	12	21.43
ATP6V0A1	0	genome.wustl.edu	37	17	40646421	40646421	+	Missense_Mutation	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	40646421	40646421	T	C	SNP	ATP6V0A1	ENST00000264649	human	ensembl	74_37	+1	known	missense	c.1265	p.L422S	1.000	pfam_V-ATPase_116kDa_su	pfam_V-ATPase_116kDa_su	-	no_errors	ATP6V0A1	HGNC	ENSG00000033627	tier1	-	-	68	0	0.00	70	19	21.35
AWAT1	0	genome.wustl.edu	37	X	69459688	69459688	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	X	69459688	69459688	C	T	SNP	AWAT1	ENST00000374521	human	ensembl	74_37	+1	known	missense	c.736	p.R246C	0.001	pfam_DAGAT	pfam_DAGAT	-	no_errors	AWAT1	HGNC	ENSG00000204195	tier1	-	-	25	0	0.00	11	21	65.62
BAI2	0	genome.wustl.edu	37	1	32207538	32207538	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	32207538	32207538	G	A	SNP	BAI2	ENST00000373658	human	ensembl	74_37	-1	known	missense	c.1448	p.A483V	0.116	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_GPCR_2_secretin-like,pfam_DUF3497,pfam_Thrombospondin_1_rpt,pfam_GPS_dom,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Thrombospondin_1_rpt,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_brain-spec_angio_inhib,prints_GPCR_2_secretin-like	-	no_errors	BAI2	HGNC	ENSG00000121753	tier1	-	-	30	0	0.00	28	4	12.12
BAIAP3	0	genome.wustl.edu	37	16	1394468	1394469	+	Splice_Site	DEL	AG	AG	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	1394468	1394469	AG	-	DEL	BAIAP3	ENST00000324385	human	ensembl	74_37	+1	known	splice_site_del	c.1708-2_1708-1	e18-1	1.000:1.000	-	-	-	no_errors	BAIAP3	HGNC	ENSG00000007516	tier1			20	0	0.00	6	9	60.00
BCR	0	genome.wustl.edu	37	22	23658274	23658275	+	RNA	INS	-	-	TTC			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	22	23658274	23658275	-	TTC	INS	BCR	ENST00000436990	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	BCR	HGNC	ENSG00000186716	tier1			24	0	0.00	23	4	14.81
BMP3	0	genome.wustl.edu	37	4	81967109	81967109	+	Missense_Mutation	SNP	A	A	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	81967109	81967109	A	C	SNP	BMP3	ENST00000282701	human	ensembl	74_37	+1	known	missense	c.534	p.Q178H	0.857	pfam_TGF-b_N,pirsf_BMP3/GDF10	pfam_TGF-b_C,pfam_TGF-b_N,smart_TGF-b_C,pirsf_BMP3/GDF10	-	no_errors	BMP3	HGNC	ENSG00000152785	tier1	-	-	48	0	0.00	20	15	42.86
BNC1	0	genome.wustl.edu	37	15	83932270	83932270	+	Missense_Mutation	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	15	83932270	83932270	T	C	SNP	BNC1	ENST00000345382	human	ensembl	74_37	-1	known	missense	c.1733	p.E578G	0.993	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	BNC1	HGNC	ENSG00000169594	tier1	-	-	61	0	0.00	16	33	67.35
C10orf118	0	genome.wustl.edu	37	10	115896001	115896001	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	115896001	115896001	G	A	SNP	C10orf118	ENST00000369287	human	ensembl	74_37	-1	known	missense	c.1331	p.S444L	1.000	NULL	superfamily_Prefoldin	-	no_errors	C10orf118	HGNC	ENSG00000165813	tier1	-	-	46	0	0.00	29	20	40.00
C10orf90	0	genome.wustl.edu	37	10	128193537	128193537	+	Nonsense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	128193537	128193537	G	A	SNP	C10orf90	ENST00000544758	human	ensembl	74_37	-1	known	nonsense	c.523	p.Q175*	0.263	NULL	NULL	-	no_errors	C10orf90	HGNC	ENSG00000154493	tier1	-	-	41	0	0.00	39	15	27.78
C12orf40	0	genome.wustl.edu	37	12	40076598	40076598	+	Missense_Mutation	SNP	T	T	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	12	40076598	40076598	T	G	SNP	C12orf40	ENST00000324616	human	ensembl	74_37	+1	known	missense	c.872	p.L291R	0.001	NULL	NULL	-	no_errors	C12orf40	HGNC	ENSG00000180116	tier1	-	-	47	0	0.00	33	23	41.07
C17orf70	0	genome.wustl.edu	37	17	79508409	79508409	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	79508409	79508409	C	T	SNP	C17orf70	ENST00000327787	human	ensembl	74_37	-1	known	missense	c.2440	p.E814K	0.560	NULL	NULL	-	no_errors	C17orf70	HGNC	ENSG00000185504	tier1	-	-	59	0	0.00	56	26	31.71
C1QC	0	genome.wustl.edu	37	1	22970666	22970666	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	22970666	22970666	C	T	SNP	C1QC	ENST00000374637	human	ensembl	74_37	+1	known	silent	c.150	p.Y50	0.442	pfam_Collagen	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QC	HGNC	ENSG00000159189				67	0	0.00	56	3	5.00
C1orf168	0	genome.wustl.edu	37	1	57202804	57202804	+	Missense_Mutation	SNP	T	T	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	57202804	57202804	T	G	SNP	C1orf168	ENST00000343433	human	ensembl	74_37	-1	known	missense	c.1749	p.E583D	0.897	NULL	superfamily_SH3_domain	-	no_errors	C1orf168	HGNC	ENSG00000187889	tier1	-	-	46	0	0.00	16	16	50.00
C2CD3	0	genome.wustl.edu	37	11	73744868	73744868	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	11	73744868	73744868	G	A	SNP	C2CD3	ENST00000334126	human	ensembl	74_37	-1	known	missense	c.6337	p.P2113S	0.198	NULL	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom	-	no_errors	C2CD3	HGNC	ENSG00000168014	tier1	-	-	28	0	0.00	14	10	41.67
CA11	0	genome.wustl.edu	37	19	49147703	49147703	+	Missense_Mutation	SNP	A	A	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	49147703	49147703	A	T	SNP	CA11	ENST00000084798	human	ensembl	74_37	-1	known	missense	c.266	p.L89H	1.000	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	pfam_Carbonic_anhydrase_a,superfamily_Carbonic_anhydrase_a,pfscan_Carbonic_anhydrase_a	-	no_errors	CA11	HGNC	ENSG00000063180	tier1	-	-	59	0	0.00	56	4	6.67
CAPN13	0	genome.wustl.edu	37	2	30954231	30954231	+	Silent	SNP	T	T	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	30954231	30954231	T	A	SNP	CAPN13	ENST00000295055	human	ensembl	74_37	-1	known	silent	c.1962	p.G654	0.936	NULL	pfam_Peptidase_C2_calpain_cat,pfam_Calpain_domain_III,superfamily_Calpain_domain_III,smart_Peptidase_C2_calpain_cat,pfscan_Peptidase_C2_calpain_cat,prints_Calpain_cysteine_protease	-	no_errors	CAPN13	HGNC	ENSG00000162949	tier1	-	-	47	0	0.00	34	14	29.17
CATSPER2	0	genome.wustl.edu	37	15	43931190	43931190	+	Missense_Mutation	SNP	A	A	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	15	43931190	43931190	A	C	SNP	CATSPER2	ENST00000321596	human	ensembl	74_37	-1	known	missense	c.754	p.F252V	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom	-	no_errors	CATSPER2	HGNC	ENSG00000166762	tier1	-	-	67	0	0.00	28	23	45.10
CATSPER2	0	genome.wustl.edu	37	15	43931194	43931194	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	15	43931194	43931194	G	A	SNP	CATSPER2	ENST00000321596	human	ensembl	74_37	-1	known	silent	c.750	p.I250	0.997	pfam_Ion_trans_dom	pfam_Ion_trans_dom	-	no_errors	CATSPER2	HGNC	ENSG00000166762	tier1	-	-	64	0	0.00	28	23	45.10
CATSPERD	0	genome.wustl.edu	37	19	5748202	5748202	+	Silent	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	5748202	5748202	A	G	SNP	CATSPERD	ENST00000381624	human	ensembl	74_37	+1	known	silent	c.840	p.K280	0.000	superfamily_WD40_repeat_dom	superfamily_WD40_repeat_dom	-	no_errors	CATSPERD	HGNC	ENSG00000174898	tier1	-	-	41	0	0.00	15	3	16.67
CBFA2T3	0	genome.wustl.edu	37	16	88945831	88945831	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	88945831	88945831	C	T	SNP	CBFA2T3	ENST00000268679	human	ensembl	74_37	-1	known	silent	c.1509	p.S503	0.034	prints_ETO	pfam_NHR2,pfam_TAFH_NHR1,pfam_Znf_MYND,smart_TAFH_NHR1,pfscan_TAFH_NHR1,pfscan_Znf_MYND,prints_ETO,prints_MTG16	-	no_errors	CBFA2T3	HGNC	ENSG00000129993	tier1	-	-	62	0	0.00	35	17	32.69
CCDC152	0	genome.wustl.edu	37	5	42799848	42799848	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	5	42799848	42799848	G	T	SNP	CCDC152	ENST00000361970	human	ensembl	74_37	+1	known	missense	c.730	p.G244C	0.000	NULL	NULL	-	no_errors	CCDC152	HGNC	ENSG00000198865	tier1	-	-	89	0	0.00	47	4	7.84
CD3EAP	0	genome.wustl.edu	37	19	45911841	45911841	+	Silent	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	45911841	45911841	G	T	SNP	CD3EAP	ENST00000589804	human	ensembl	74_37	+1	known	silent	c.621	p.S207	0.000	pfam_DNA-dir_RNA_pol1_su_RPA34	pfam_DNA-dir_RNA_pol1_su_RPA34	-	no_errors	CD3EAP	HGNC	ENSG00000117877	tier1	-	-	40	0	0.00	40	4	9.09
CDH11	0	genome.wustl.edu	37	16	65032732	65032732	+	Missense_Mutation	SNP	C	C	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	65032732	65032732	C	G	SNP	CDH11	ENST00000268603	human	ensembl	74_37	-1	known	missense	c.256	p.G86R	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH11	HGNC	ENSG00000140937	tier1	-	-	21	0	0.00	6	10	62.50
CHAC2	0	genome.wustl.edu	37	2	54001511	54001511	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	54001511	54001511	C	T	SNP	CHAC2	ENST00000295304	human	ensembl	74_37	+1	known	missense	c.404	p.A135V	0.964	pfam_ChaC	pfam_ChaC	-	no_errors	CHAC2	HGNC	ENSG00000143942	tier1	-	-	56	0	0.00	75	4	5.06
CHAT	0	genome.wustl.edu	37	10	50833616	50833616	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	50833616	50833616	G	A	SNP	CHAT	ENST00000337653	human	ensembl	74_37	+1	known	missense	c.850	p.G284S	1.000	pfam_Carn_acyl_trans	pfam_Carn_acyl_trans	-	no_errors	CHAT	HGNC	ENSG00000070748	tier1	rs146236256	-	39	0	0.00	17	12	41.38
CHD5	0	genome.wustl.edu	37	1	6188230	6188230	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	6188230	6188230	G	A	SNP	CHD5	ENST00000262450	human	ensembl	74_37	-1	known	missense	c.3779	p.A1260V	0.908	NULL	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD5	HGNC	ENSG00000116254				43	0	0.00	43	4	8.51
CHGA	0	genome.wustl.edu	37	14	93397759	93397761	+	In_Frame_Del	DEL	GAG	GAG	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	GAG	GAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	14	93397759	93397761	GAG	0	DEL	CHGA	ENST00000216492	human	ensembl	74_37	+1	known	in_frame_del	c.520_522	p.E177in_frame_del	0.168:0.190:0.200	pfam_Granin	pfam_Granin,prints_Chromogranin_AB	-	no_errors	CHGA	HGNC	ENSG00000100604				58	0	0.00	69	5	6.76
CHRNB1	0	genome.wustl.edu	37	17	7351982	7351982	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	7351982	7351982	G	A	SNP	CHRNB1	ENST00000306071	human	ensembl	74_37	+1	known	missense	c.695	p.R232H	0.016	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neurotrans-gated_channel_TM,pfam_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,prints_Nicotinic_acetylcholine_rcpt,prints_Neur_channel,tigrfam_Neur_channel	-	no_errors	CHRNB1	HGNC	ENSG00000170175	tier1	rs202080837	-	38	0	0.00	12	11	47.83
CHST10	0	genome.wustl.edu	37	2	101014407	101014407	+	Silent	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	101014407	101014407	G	T	SNP	CHST10	ENST00000542617	human	ensembl	74_37	-1	known	silent	c.534	p.G178	1.000	pfam_Sulfotransferase,superfamily_P-loop_NTPase	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	CHST10	HGNC	ENSG00000115526	tier1	-	-	51	0	0.00	69	4	5.48
CHTF18	0	genome.wustl.edu	37	16	845705	845705	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	845705	845705	G	A	SNP	CHTF18	ENST00000317063	human	ensembl	74_37	+1	known	silent	c.2823	p.Q941	0.721	NULL	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	CHTF18	HGNC	ENSG00000127586	tier1	-	-	27	0	0.00	7	14	66.67
CIAPIN1	0	genome.wustl.edu	37	16	57463119	57463119	+	Missense_Mutation	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	57463119	57463119	T	C	SNP	CIAPIN1	ENST00000394391	human	ensembl	74_37	-1	known	missense	c.902	p.K301R	1.000	pfam_Anamorsin	pfam_Anamorsin	-	no_errors	CIAPIN1	HGNC	ENSG00000005194	tier1	-	-	32	0	0.00	50	4	7.41
CLCN7	0	genome.wustl.edu	37	16	1500530	1500530	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	1500530	1500530	C	T	SNP	CLCN7	ENST00000382745	human	ensembl	74_37	-1	known	missense	c.1585	p.G529R	1.000	pfam_Cl-channel_volt-gated,superfamily_Cl-channel_core,prints_Cl-channel_volt-gated	pfam_Cl-channel_volt-gated,pfam_CBS_dom,superfamily_Cl-channel_core,smart_CBS_dom,prints_Cl-channel_volt-gated,prints_Cl_channel-7	-	no_errors	CLCN7	HGNC	ENSG00000103249	tier1	-	-	85	0	0.00	48	36	42.86
CNOT7	0	genome.wustl.edu	37	8	17092319	17092319	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	8	17092319	17092319	G	A	SNP	CNOT7	ENST00000361272	human	ensembl	74_37	-1	known	missense	c.524	p.P175L	1.000	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	-	no_errors	CNOT7	HGNC	ENSG00000198791	tier1	-	-	46	0	0.00	13	10	43.48
CNTNAP5	0	genome.wustl.edu	37	2	125521620	125521620	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	125521620	125521620	C	T	SNP	CNTNAP5	ENST00000431078	human	ensembl	74_37	+1	known	missense	c.2426	p.A809V	0.991	superfamily_ConA-like_lec_gl_sf,pfscan_Laminin_G	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP5	HGNC	ENSG00000155052	tier1	-	-	75	0	0.00	32	17	34.69
COL12A1	0	genome.wustl.edu	37	6	75831041	75831041	+	Nonsense_Mutation	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	75831041	75831041	C	A	SNP	COL12A1	ENST00000322507	human	ensembl	74_37	-1	known	nonsense	c.7063	p.E2355*	0.997	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Fibronectin_type3,pfam_VWF_A,pfam_Collagen,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_VWF_A,smart_Laminin_G,pfscan_Fibronectin_type3,pfscan_VWF_A	-	no_errors	COL12A1	HGNC	ENSG00000111799	tier1	-	-	68	0	0.00	59	24	28.92
COL4A5	0	genome.wustl.edu	37	X	107783031	107783031	+	Frame_Shift_Del	DEL	A	A	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	X	107783031	107783031	A	-	DEL	COL4A5	ENST00000328300	human	ensembl	74_37	+1	known	frame_shift_del	c.137	p.K47fs	1.000	NULL	pfam_Collagen,pfam_Collagen_VI_NC,superfamily_C-type_lectin_fold,smart_Collagen_VI_NC	-	no_errors	COL4A5	HGNC	ENSG00000188153	tier1			25	0	0.00	26	2	7.14
COL5A1	0	genome.wustl.edu	37	9	137710737	137710737	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	9	137710737	137710737	C	T	SNP	COL5A1	ENST00000371817	human	ensembl	74_37	+1	known	missense	c.4382	p.P1461L	1.000	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL5A1	HGNC	ENSG00000130635	tier1	-	-	66	0	0.00	71	18	20.22
COL9A3	0	genome.wustl.edu	37	20	61468375	61468375	+	RNA	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	20	61468375	61468375	G	A	SNP	COL9A3	ENST00000466532	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	COL9A3	HGNC	ENSG00000092758	tier1	-	-	54	0	0.00	35	22	38.60
CPNE5	0	genome.wustl.edu	37	6	36762394	36762394	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	36762394	36762394	C	T	SNP	CPNE5	ENST00000244751	human	ensembl	74_37	-1	known	missense	c.437	p.G146D	1.000	NULL	pfam_Copine,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,smart_VWF_A,pfscan_C2_dom,pfscan_VWF_A	-	no_errors	CPNE5	HGNC	ENSG00000124772	tier1	-	-	39	0	0.00	53	4	7.02
CPSF6	0	genome.wustl.edu	37	12	69652800	69652800	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	12	69652800	69652800	C	T	SNP	CPSF6	ENST00000266679	human	ensembl	74_37	+1	known	silent	c.1236	p.S412	0.901	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	CPSF6	HGNC	ENSG00000111605	tier1	-	-	31	0	0.00	17	8	32.00
CRELD2	0	genome.wustl.edu	37	22	50320932	50320932	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	22	50320932	50320932	C	T	SNP	CRELD2	ENST00000404488	human	ensembl	74_37	+1	known	silent	c.1186	p.L396	0.000	NULL	pfam_DUF3456,pfam_EGF-like_Ca-bd_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_Furin_repeat,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	CRELD2	HGNC	ENSG00000184164				34	0	0.00	31	3	8.82
CSHL1	0	genome.wustl.edu	37	17	61987063	61987063	+	RNA	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	61987063	61987063	G	A	SNP	CSHL1	ENST00000558099	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.011	-	-	-	no_errors	CSHL1	HGNC	ENSG00000204414	tier1	-	-	86	0	0.00	77	32	29.36
CSMD1	0	genome.wustl.edu	37	8	2824141	2824141	+	Frame_Shift_Del	DEL	C	C	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	8	2824141	2824141	C	-	DEL	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	frame_shift_del	c.9054	p.H3019fs	0.192	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1			45	0	0.00	28	14	33.33
CT47B1	0	genome.wustl.edu	37	X	120009285	120009285	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	X	120009285	120009285	G	A	SNP	CT47B1	ENST00000371311	human	ensembl	74_37	-1	known	silent	c.240	p.S80	0.001	NULL	NULL	-	no_errors	CT47B1	HGNC	ENSG00000236446	tier1	-	-	44	0	0.00	1	69	98.57
CTPS1	0	genome.wustl.edu	37	1	41448956	41448956	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	41448956	41448956	G	A	SNP	CTPS1	ENST00000543104	human	ensembl	74_37	+1	known	silent	c.15	p.K5	0.130	NULL	pfam_CTP_synthase_N,superfamily_P-loop_NTPase	-	no_errors	CTPS1	HGNC	ENSG00000171793	tier1	-	-	52	0	0.00	55	4	6.78
DDAH1	0	genome.wustl.edu	37	1	85824494	85824494	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	85824494	85824494	G	T	SNP	DDAH1	ENST00000284031	human	ensembl	74_37	-1	known	missense	c.340	p.L114I	1.000	pfam_Amidino_trans	pfam_Amidino_trans	-	no_errors	DDAH1	HGNC	ENSG00000153904				28	0	0.00	26	2	7.14
DGKB	0	genome.wustl.edu	37	7	14722292	14722292	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	7	14722292	14722292	G	A	SNP	DGKB	ENST00000258767	human	ensembl	74_37	-1	known	silent	c.921	p.V307	0.990	NULL	pfam_Diacylglycerol_kin_accessory,pfam_Diacylglycerol_kinase_cat_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_EF_hand_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Diacylglycerol_kinase_cat_dom,smart_Diacylglycerol_kin_accessory,pfscan_EF_hand_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DGKB	HGNC	ENSG00000136267	tier1	-	-	61	0	0.00	71	18	20.22
DIS3L2	0	genome.wustl.edu	37	2	232952395	232952395	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	232952395	232952395	G	T	SNP	DIS3L2	ENST00000325385	human	ensembl	74_37	+1	known	missense	c.565	p.G189C	0.748	NULL	NULL	-	no_errors	DIS3L2	HGNC	ENSG00000144535	tier1	-	-	43	0	0.00	33	4	10.81
DKC1	0	genome.wustl.edu	37	X	154005130	154005130	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	X	154005130	154005130	G	A	SNP	DKC1	ENST00000369550	human	ensembl	74_37	+1	known	silent	c.1533	p.L511	0.000	NULL	pfam_Dyskerin-like,pfam_PsdUridine_synth,pfam_PUA,superfamily_PsdUridine_synth_cat_dom,superfamily_PUA-like_domain,smart_PUA,pfscan_PUA,tigrfam_tRNA_PsdUridine_synth_B_fam,tigrfam_Uncharacterised_CHP00451	-	no_errors	DKC1	HGNC	ENSG00000130826	tier1	-	-	27	0	0.00	32	25	43.86
DKK4	0	genome.wustl.edu	37	8	42231698	42231698	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	8	42231698	42231698	C	T	SNP	DKK4	ENST00000220812	human	ensembl	74_37	-1	known	missense	c.595	p.G199R	1.000	pfam_Prokineticin_domain	pfam_Dickkopf_N,pfam_Prokineticin_domain	-	no_errors	DKK4	HGNC	ENSG00000104371				35	0	0.00	32	2	5.88
DMXL2	0	genome.wustl.edu	37	15	51839582	51839582	+	Nonsense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	15	51839582	51839582	C	T	SNP	DMXL2	ENST00000543779	human	ensembl	74_37	-1	known	nonsense	c.591	p.W197*	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL2	HGNC	ENSG00000104093				26	0	0.00	27	2	6.90
DNAH11	0	genome.wustl.edu	37	7	21583082	21583082	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	7	21583082	21583082	G	A	SNP	DNAH11	ENST00000328843	human	ensembl	74_37	+1	known	silent	c.219	p.T73	0.709	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH11	HGNC	ENSG00000105877	tier1	-	-	70	0	0.00	78	19	19.59
DNAH3	0	genome.wustl.edu	37	16	20996802	20996802	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	20996802	20996802	C	T	SNP	DNAH3	ENST00000261383	human	ensembl	74_37	-1	known	missense	c.7262	p.R2421H	1.000	superfamily_P-loop_NTPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_AAA+_ATPase	-	no_errors	DNAH3	HGNC	ENSG00000158486				45	0	0.00	30	3	9.09
DNAH5	0	genome.wustl.edu	37	5	13839580	13839580	+	Missense_Mutation	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	5	13839580	13839580	A	G	SNP	DNAH5	ENST00000265104	human	ensembl	74_37	-1	known	missense	c.5767	p.Y1923H	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH5	HGNC	ENSG00000039139	tier1	-	-	36	0	0.00	4	27	87.10
DNER	0	genome.wustl.edu	37	2	230253070	230253070	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	230253070	230253070	G	T	SNP	DNER	ENST00000341772	human	ensembl	74_37	-1	known	missense	c.1766	p.P589H	1.000	pfam_EG-like_dom,pfam_EGF_extracell,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF_extracell,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	DNER	HGNC	ENSG00000187957				54	0	0.00	40	3	6.98
DNM1	0	genome.wustl.edu	37	9	130980992	130980992	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	9	130980992	130980992	C	T	SNP	DNM1	ENST00000372923	human	ensembl	74_37	+1	known	missense	c.367	p.R123C	1.000	pfam_Dynamin_GTPase,superfamily_P-loop_NTPase,smart_Dynamin_GTPase	pfam_Dynamin_central,pfam_Dynamin_GTPase,pfam_GED,pfam_Pleckstrin_homology,superfamily_P-loop_NTPase,smart_Dynamin_GTPase,smart_Pleckstrin_homology,smart_GED,pfscan_Pleckstrin_homology,prints_Dynamin_SF	-	no_errors	DNM1	HGNC	ENSG00000106976	tier1	-	-	71	0	0.00	16	59	78.67
DOCK3	0	genome.wustl.edu	37	3	51264859	51264859	+	Missense_Mutation	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	51264859	51264859	A	G	SNP	DOCK3	ENST00000266037	human	ensembl	74_37	+1	known	missense	c.1523	p.E508G	1.000	NULL	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_ARM-type_fold,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK3	HGNC	ENSG00000088538	tier1	-	-	57	0	0.00	66	4	5.71
DOPEY1	0	genome.wustl.edu	37	6	83878179	83878180	+	RNA	INS	-	-	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	83878179	83878180	-	T	INS	DOPEY1	ENST00000484282	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.998:1.000	-	-	-	no_errors	DOPEY1	HGNC	ENSG00000083097	tier1			16	0	0.00	12	3	20.00
DPH2	0	genome.wustl.edu	37	1	44436634	44436634	+	RNA	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	44436634	44436634	G	A	SNP	DPH2	ENST00000477294	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.949	-	-	-	no_errors	DPH2	HGNC	ENSG00000132768	tier1	-	-	26	0	0.00	13	3	18.75
DPYSL4	0	genome.wustl.edu	37	10	134017229	134017229	+	RNA	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	134017229	134017229	C	T	SNP	DPYSL4	ENST00000471544	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DPYSL4	HGNC	ENSG00000151640	tier1	-	-	28	0	0.00	26	4	13.33
DUSP22	0	genome.wustl.edu	37	6	345905	345905	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	345905	345905	C	T	SNP	DUSP22	ENST00000419235	human	ensembl	74_37	+1	known	silent	c.240	p.R80	0.000	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	DUSP22	HGNC	ENSG00000112679	tier1	rs144845390	-	73	0	0.00	66	17	20.48
DYNC2H1	0	genome.wustl.edu	37	11	103107245	103107245	+	Nonsense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	11	103107245	103107245	G	T	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	nonsense	c.9796	p.E3266*	1.000	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240				74	0	0.00	49	3	5.77
ECE2	0	genome.wustl.edu	37	3	184008605	184008605	+	Silent	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	184008605	184008605	T	C	SNP	ECE2	ENST00000402825	human	ensembl	74_37	+1	known	silent	c.2145	p.G715	0.163	pfam_Peptidase_M13_C,prints_Peptidase_M13_C	pfam_Peptidase_M13_N,pfam_Peptidase_M13_C,pfam_Methyltransf_11,prints_Peptidase_M13_C	-	no_errors	ECE2	HGNC	ENSG00000145194				79	0	0.00	76	4	5.00
EDEM1	0	genome.wustl.edu	37	3	5252815	5252815	+	Missense_Mutation	SNP	G	G	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	5252815	5252815	G	C	SNP	EDEM1	ENST00000256497	human	ensembl	74_37	+1	known	missense	c.1594	p.A532P	1.000	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47	pfam_Glyco_hydro_47,superfamily_Glyco_hydro_47,prints_Glyco_hydro_47	-	no_errors	EDEM1	HGNC	ENSG00000134109	tier1	-	-	61	0	0.00	31	52	62.65
EGLN1	0	genome.wustl.edu	37	1	231502060	231502060	+	RNA	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	231502060	231502060	G	T	SNP	EGLN1	ENST00000476717	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	EGLN1	HGNC	ENSG00000135766	tier1	-	-	52	0	0.00	23	3	11.54
EHF	0	genome.wustl.edu	37	11	34680231	34680231	+	Missense_Mutation	SNP	G	G	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	11	34680231	34680231	G	C	SNP	EHF	ENST00000257831	human	ensembl	74_37	+1	known	missense	c.759	p.K253N	0.380	pfam_Ets_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	pfam_Ets_dom,pfam_Pointed_dom,superfamily_SAM/pointed,smart_Pointed_dom,smart_Ets_dom,pfscan_Ets_dom,prints_Ets_dom	-	no_errors	EHF	HGNC	ENSG00000135373	tier1	-	-	61	0	0.00	3	26	89.66
EIF3K	0	genome.wustl.edu	37	19	39123269	39123270	+	In_Frame_Ins	INS	-	-	CAG			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	39123269	39123270	-	CAG	INS	EIF3K	ENST00000248342	human	ensembl	74_37	+1	known	in_frame_ins	c.450_451	p.151in_frame_insQ	1.000:1.000	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25	pfam_SAC3/GANP/Nin1/mts3/eIF-3-p25,superfamily_ARM-type_fold	-	no_errors	EIF3K	HGNC	ENSG00000178982	tier1			56	0	0.00	24	9	27.27
ENSG00000224761	0	genome.wustl.edu	37	10	38464759	38464759	+	RNA	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	38464759	38464759	C	T	SNP	ENSG00000224761	ENST00000423162	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.019	-	-	-	no_errors	RP11-508N22.8	Clone_based_vega_gene	ENSG00000224761	tier1	-	-	29	0	0.00	17	20	54.05
ENSG00000226524	0	genome.wustl.edu	37	6	88109151	88109151	+	Splice_Site	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	88109151	88109151	G	T	SNP	ENSG00000226524	ENST00000448282	human	ensembl	74_37	+1	known	splice_site	c.177-1	e3-1	0.000	-	-	-	no_errors	RP1-102H19.8	Clone_based_vega_gene	ENSG00000226524	tier1	-	-	50	0	0.00	51	5	8.93
ENSG00000231512	0	genome.wustl.edu	37	1	243211043	243211043	+	RNA	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	243211043	243211043	A	G	SNP	ENSG00000231512	ENST00000420830	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.998	-	-	-	no_errors	RP11-261C10.2	Clone_based_vega_gene	ENSG00000231512	tier1	-	-	196	0	0.00	84	115	57.79
ENSG00000258377	0	genome.wustl.edu	37	14	50089989	50089989	+	RNA	DEL	T	T	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	14	50089989	50089989	T	-	DEL	ENSG00000258377	ENST00000555043	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	RP11-649E7.5	Clone_based_vega_gene	ENSG00000258377	tier1			38	0	0.00	40	12	23.08
ENSG00000259455	0	genome.wustl.edu	37	15	23407236	23407236	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	15	23407236	23407236	G	A	SNP	ENSG00000259455	ENST00000558241	human	ensembl	74_37	-1	novel	missense	c.1600	p.R534W	0.035	NULL	superfamily_Ribosomal_L7/12_C/ClpS-like,prints_Tropomyosin	-	no_errors	RP11-467N20.5	Clone_based_vega_gene	ENSG00000259455	tier1	-	-	9	0	0.00	4	6	60.00
ENSG00000260206	0	genome.wustl.edu	37	15	75931413	75931413	+	RNA	DEL	A	A	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	15	75931413	75931413	A	-	DEL	ENSG00000260206	ENST00000564683	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.127	-	-	-	no_errors	CTD-2026K11.2	Clone_based_vega_gene	ENSG00000260206	tier1			21	0	0.00	22	2	8.33
EOGT	0	genome.wustl.edu	37	3	69047176	69047176	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	69047176	69047176	C	T	SNP	EOGT	ENST00000383701	human	ensembl	74_37	-1	known	missense	c.817	p.V273M	1.000	pfam_Glycosyltransferase_AER61	pfam_Glycosyltransferase_AER61	-	no_errors	EOGT	HGNC	ENSG00000163378				26	0	0.00	31	2	6.06
ERBB2	0	genome.wustl.edu	37	17	37868208	37868208	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	37868208	37868208	C	T	SNP	ERBB2	ENST00000269571	human	ensembl	74_37	+1	known	missense	c.929	p.S310F	1.000	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Furin-like_Cys-rich_dom,superfamily_Growth_fac_rcpt_N_dom	pirsf_Tyr_kinase_EGF/ERB/XmrK_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,smart_Furin_repeat,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	ERBB2	HGNC	ENSG00000141736	tier1	-	-	44	0	0.00	41	473	92.02
ERVV-2	0	genome.wustl.edu	37	19	53553339	53553339	+	Missense_Mutation	SNP	C	C	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	53553339	53553339	C	G	SNP	ERVV-2	ENST00000601417	human	ensembl	74_37	+1	known	missense	c.835	p.P279A	0.004	NULL	pfam_TLV/ENV_coat_polyprotein	-	no_errors	ERVV-2	HGNC	ENSG00000268964	tier1	rs200390313	-	43	0	0.00	1	2	66.67
ESPL1	0	genome.wustl.edu	37	12	53677886	53677886	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	12	53677886	53677886	G	A	SNP	ESPL1	ENST00000257934	human	ensembl	74_37	+1	known	missense	c.3122	p.R1041H	1.000	NULL	pfam_Peptidase_C50,superfamily_DsrEFH-like	-	no_errors	ESPL1	HGNC	ENSG00000135476	tier1	-	-	44	0	0.00	41	14	25.45
ESPNP	0	genome.wustl.edu	37	1	17026043	17026044	+	RNA	INS	-	-	GCA			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	17026043	17026044	-	GCA	INS	ESPNP	ENST00000492551	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.970:0.965	-	-	-	no_errors	ESPNP	HGNC	ENSG00000268869	tier1			8	0	0.00	9	4	30.77
EXD2	0	genome.wustl.edu	37	14	69695648	69695648	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	14	69695648	69695648	G	T	SNP	EXD2	ENST00000312994	human	ensembl	74_37	+1	known	missense	c.449	p.R150I	0.964	pfam_3'-5'_exonuclease_dom,superfamily_RNaseH-like_dom,smart_3'-5'_exonuclease_dom	pfam_3'-5'_exonuclease_dom,superfamily_RNaseH-like_dom,smart_3'-5'_exonuclease_dom	-	no_errors	EXD2	HGNC	ENSG00000081177	tier1	-	-	52	0	0.00	66	4	5.71
FAM124A	0	genome.wustl.edu	37	13	51854757	51854757	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	13	51854757	51854757	C	T	SNP	FAM124A	ENST00000280057	human	ensembl	74_37	+1	known	missense	c.1114	p.P372S	0.000	NULL	NULL	-	no_errors	FAM124A	HGNC	ENSG00000150510				39	0	0.00	49	3	5.77
FAM126B	0	genome.wustl.edu	37	2	201846001	201846001	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	201846001	201846001	G	T	SNP	FAM126B	ENST00000418596	human	ensembl	74_37	-1	known	missense	c.1585	p.Q529K	1.000	NULL	pfam_Hyccin	-	no_errors	FAM126B	HGNC	ENSG00000155744				27	0	0.00	30	4	11.76
FAM188A	0	genome.wustl.edu	37	10	15876565	15876565	+	Missense_Mutation	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	15876565	15876565	T	C	SNP	FAM188A	ENST00000277632	human	ensembl	74_37	-1	known	missense	c.627	p.I209M	1.000	NULL	NULL	-	no_errors	FAM188A	HGNC	ENSG00000148481	tier1	-	-	55	0	0.00	60	4	6.25
FAM19A1	0	genome.wustl.edu	37	3	68588032	68588032	+	Splice_Site	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	68588032	68588032	G	T	SNP	FAM19A1	ENST00000478136	human	ensembl	74_37	+1	known	splice_site	c.384+1	e3+1	1.000	-	-	-	no_errors	FAM19A1	HGNC	ENSG00000183662	tier1	-	-	46	0	0.00	20	27	57.45
FAM78A	0	genome.wustl.edu	37	9	134136426	134136426	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	9	134136426	134136426	C	T	SNP	FAM78A	ENST00000372271	human	ensembl	74_37	-1	known	missense	c.635	p.R212H	1.000	NULL	NULL	-	no_errors	FAM78A	HGNC	ENSG00000126882				20	0	0.00	25	2	7.41
FANCB	0	genome.wustl.edu	37	X	14882980	14882980	+	Missense_Mutation	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	X	14882980	14882980	T	C	SNP	FANCB	ENST00000324138	human	ensembl	74_37	-1	known	missense	c.653	p.E218G	1.000	NULL	NULL	-	no_errors	FANCB	HGNC	ENSG00000181544	tier1	-	-	26	0	0.00	41	4	8.89
FAT4	0	genome.wustl.edu	37	4	126389802	126389802	+	Missense_Mutation	SNP	T	T	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	126389802	126389802	T	A	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.12035	p.L4012H	1.000	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159	tier1	-	-	78	0	0.00	34	27	44.26
FGFRL1	0	genome.wustl.edu	37	4	1006305	1006305	+	Missense_Mutation	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	1006305	1006305	T	C	SNP	FGFRL1	ENST00000264748	human	ensembl	74_37	+1	known	missense	c.32	p.L11P	0.263	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FGFRL1	HGNC	ENSG00000127418	tier1	-	-	16	0	0.00	2	4	66.67
FLT1	0	genome.wustl.edu	37	13	29012409	29012409	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	13	29012409	29012409	G	A	SNP	FLT1	ENST00000282397	human	ensembl	74_37	-1	known	silent	c.462	p.L154	0.007	smart_Ig_sub,smart_Ig_sub2,prints_VEGFR1_rcpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Prot_kinase_dom,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_VEGFR1_rcpt	-	no_errors	FLT1	HGNC	ENSG00000102755	tier1	-	-	61	0	0.00	65	15	18.75
FNDC1	0	genome.wustl.edu	37	6	159653833	159653833	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	159653833	159653833	G	A	SNP	FNDC1	ENST00000297267	human	ensembl	74_37	+1	known	missense	c.2289	p.M763I	0.001	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	FNDC1	HGNC	ENSG00000164694	tier1	-	-	71	0	0.00	22	20	45.45
GLTSCR1L	0	genome.wustl.edu	37	6	42832452	42832452	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	42832452	42832452	G	A	SNP	GLTSCR1L	ENST00000314073	human	ensembl	74_37	+1	known	silent	c.2508	p.E836	0.993	NULL	NULL	-	no_errors	GLTSCR1L	HGNC	ENSG00000112624	tier1	-	-	44	0	0.00	40	19	32.20
GMIP	0	genome.wustl.edu	37	19	19752628	19752628	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	19752628	19752628	G	A	SNP	GMIP	ENST00000203556	human	ensembl	74_37	-1	known	missense	c.229	p.P77S	0.963	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	GMIP	HGNC	ENSG00000089639				40	0	0.00	73	4	5.19
GOLGA2P5	0	genome.wustl.edu	37	12	100562921	100562921	+	RNA	DEL	T	T	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	12	100562921	100562921	T	-	DEL	GOLGA2P5	ENST00000421840	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	GOLGA2B	Clone_based_vega_gene	ENSG00000238105	tier1			22	0	0.00	17	6	26.09
GOLGB1	0	genome.wustl.edu	37	3	121410779	121410779	+	Nonsense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	121410779	121410779	G	A	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	nonsense	c.7417	p.R2473*	1.000	NULL	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230	tier1	-	-	57	0	0.00	37	40	51.95
GRAP2	0	genome.wustl.edu	37	22	40365485	40365485	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	22	40365485	40365485	C	T	SNP	GRAP2	ENST00000344138	human	ensembl	74_37	+1	known	missense	c.761	p.A254V	0.070	NULL	pfam_SH3_domain,pfam_SH2,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain	-	no_errors	GRAP2	HGNC	ENSG00000100351				34	0	0.00	26	3	10.34
GRHPR	0	genome.wustl.edu	37	9	37424873	37424873	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	9	37424873	37424873	C	T	SNP	GRHPR	ENST00000318158	human	ensembl	74_37	+1	known	missense	c.115	p.P39S	1.000	pfam_D-isomer_2_OHA_DH_cat_dom	pfam_D-isomer_2_OHA_DH_NAD-bd,pfam_D-isomer_2_OHA_DH_cat_dom,pfam_6PGDH_NADP-bd	-	no_errors	GRHPR	HGNC	ENSG00000137106				93	0	0.00	76	4	5.00
GRID1	0	genome.wustl.edu	37	10	87361822	87361822	+	RNA	SNP	T	T	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	87361822	87361822	T	G	SNP	GRID1	ENST00000552278	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GRID1	HGNC	ENSG00000182771	tier1	-	-	61	0	0.00	32	49	60.49
GRID1	0	genome.wustl.edu	37	10	87361885	87361885	+	RNA	SNP	T	T	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	87361885	87361885	T	A	SNP	GRID1	ENST00000552278	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GRID1	HGNC	ENSG00000182771	tier1	-	-	73	0	0.00	29	36	55.38
GRIK3	0	genome.wustl.edu	37	1	37325592	37325592	+	Silent	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	37325592	37325592	G	T	SNP	GRIK3	ENST00000373091	human	ensembl	74_37	-1	known	silent	c.813	p.P271	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_Iontro_glu_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIK3	HGNC	ENSG00000163873	tier1	-	-	50	0	0.00	37	4	9.76
GRM1	0	genome.wustl.edu	37	6	146755745	146755745	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	146755745	146755745	C	T	SNP	GRM1	ENST00000282753	human	ensembl	74_37	+1	known	missense	c.3398	p.A1133V	0.546	NULL	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_Metabotropic_Glu_rcpt_Homer-bd,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3_mtglu_rcpt_1,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_5	-	no_errors	GRM1	HGNC	ENSG00000152822	tier1	-	-	41	0	0.00	7	7	50.00
GVINP1	0	genome.wustl.edu	37	11	6740194	6740194	+	RNA	SNP	T	T	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	11	6740194	6740194	T	G	SNP	GVINP1	ENST00000526769	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	GVINP1	HGNC	ENSG00000254838	tier1	-	-	35	0	0.00	37	4	9.76
HCN1	0	genome.wustl.edu	37	5	45303785	45303785	+	Frame_Shift_Del	DEL	T	T	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	5	45303785	45303785	T	-	DEL	HCN1	ENST00000303230	human	ensembl	74_37	-1	known	frame_shift_del	c.1534	p.M512fs	1.000	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom	pfam_Ion_trans_N,pfam_cNMP-bd_dom,pfam_Ion_trans_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pfscan_cNMP-bd_dom,prints_K_chnl_volt-dep_EAG/ELK/ERG	-	no_errors	HCN1	HGNC	ENSG00000164588	tier1			57	0	0.00	38	2	5.00
HIST1H2AE	0	genome.wustl.edu	37	6	26217425	26217427	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	26217425	26217427	AAG	-	DEL	HIST1H2AE	ENST00000303910	human	ensembl	74_37	+1	known	in_frame_del	c.223_225	p.K76in_frame_del	1.000:1.000:1.000	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	pfam_Histone_core_D,pfam_CBFA_NFYB_domain,superfamily_Histone-fold,smart_Histone_H2A,prints_Histone_H2A	-	no_errors	HIST1H2AE	HGNC	ENSG00000168274	tier1			121	0	0.00	106	31	22.63
HMCN1	0	genome.wustl.edu	37	1	186115011	186115011	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	186115011	186115011	G	A	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.14564	p.G4855E	1.000	pfam_Thrombospondin_1_rpt,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	43	0	0.00	24	26	52.00
HMGB1P5	0	genome.wustl.edu	37	3	22423956	22423956	+	RNA	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	22423956	22423956	G	A	SNP	HMGB1P5	ENST00000451497	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.967	-	-	-	no_errors	HMGB1P5	HGNC	ENSG00000132967	tier1	-	-	35	0	0.00	28	7	20.00
HN1L	0	genome.wustl.edu	37	16	1735557	1735557	+	Silent	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	1735557	1735557	T	C	SNP	HN1L	ENST00000248098	human	ensembl	74_37	+1	known	silent	c.162	p.P54	0.992	NULL	NULL	-	no_errors	HN1L	HGNC	ENSG00000206053				61	0	0.00	60	4	6.25
HNRNPH3	0	genome.wustl.edu	37	10	70096998	70096999	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	70096998	70096999	AT	-	DEL	HNRNPH3	ENST00000265866	human	ensembl	74_37	+1	known	frame_shift_del	c.20_21	p.H7fs	1.000:1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPH3	HGNC	ENSG00000096746	tier1			60	0	0.00	74	26	26.00
HOPX	0	genome.wustl.edu	37	4	57522152	57522152	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	57522152	57522152	G	A	SNP	HOPX	ENST00000554144	human	ensembl	74_37	-1	known	silent	c.69	p.T23	0.000	superfamily_Homeodomain-like	superfamily_Homeodomain-like	-	no_errors	HOPX	HGNC	ENSG00000171476	tier1	-	-	47	0	0.00	19	19	50.00
HOXA4	0	genome.wustl.edu	37	7	27170323	27170323	+	Silent	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	7	27170323	27170323	G	T	SNP	HOXA4	ENST00000360046	human	ensembl	74_37	-1	known	silent	c.30	p.S10	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa,prints_Homeobox_antennapedia	-	no_errors	HOXA4	HGNC	ENSG00000197576	tier1	-	-	38	0	0.00	69	4	5.48
HOXC12	0	genome.wustl.edu	37	12	54348838	54348838	+	Missense_Mutation	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	12	54348838	54348838	T	C	SNP	HOXC12	ENST00000243103	human	ensembl	74_37	+1	known	missense	c.125	p.L42P	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeobox_metazoa	-	no_errors	HOXC12	HGNC	ENSG00000123407	tier1	-	-	96	0	0.00	95	5	5.00
HSPG2	0	genome.wustl.edu	37	1	22201217	22201217	+	Silent	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	22201217	22201217	A	G	SNP	HSPG2	ENST00000374695	human	ensembl	74_37	-1	known	silent	c.3420	p.C1140	1.000	pfam_EGF_laminin	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Laminin_G,pfam_Laminin_B_type_IV,pfam_EGF_laminin,pfam_LDrepeatLR_classA_rpt,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_SEA_dom,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Laminin_B_subgr,smart_EGF_laminin,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_LDrepeatLR_classA_rpt,pfscan_SEA_dom,pfscan_Ig-like_dom,prints_LDrepeatLR_classA_rpt	-	no_errors	HSPG2	HGNC	ENSG00000142798				88	0	0.00	71	4	5.33
IGHV1OR21-1	0	genome.wustl.edu	37	21	10862949	10862949	+	Missense_Mutation	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	21	10862949	10862949	A	G	SNP	IGHV1OR21-1	ENST00000559480	human	ensembl	74_37	+1	known	missense	c.245	p.K82R	0.002	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGHV1OR21-1	HGNC	ENSG00000169861	tier1	-	-	307	0	0.00	248	41	14.19
IL9R	0	genome.wustl.edu	37	X	155234213	155234213	+	Missense_Mutation	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	X	155234213	155234213	C	A	SNP	IL9R	ENST00000244174	human	ensembl	74_37	+1	known	missense	c.562	p.Q188K	0.921	superfamily_Fibronectin_type3	superfamily_Fibronectin_type3	-	no_errors	IL9R	HGNC	ENSG00000124334	tier1	-	-	124	0	0.00	133	32	19.39
IQCF3	0	genome.wustl.edu	37	3	51864628	51864628	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	51864628	51864628	G	A	SNP	IQCF3	ENST00000444293	human	ensembl	74_37	+1	putative	missense	c.166	p.D56N	0.000	NULL	NULL	-	no_errors	IQCF3	HGNC	ENSG00000229972	tier1	-	-	53	0	0.00	17	31	64.58
IQGAP2	0	genome.wustl.edu	37	5	75893335	75893335	+	Missense_Mutation	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	5	75893335	75893335	A	G	SNP	IQGAP2	ENST00000274364	human	ensembl	74_37	+1	known	missense	c.979	p.K327E	0.605	NULL	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_P-loop_NTPase,superfamily_WW_dom,smart_CH-domain,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_WW_dom,pfscan_RasGAP	-	no_errors	IQGAP2	HGNC	ENSG00000145703	tier1	-	-	30	0	0.00	13	8	38.10
ITGB7	0	genome.wustl.edu	37	12	53585372	53585372	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	12	53585372	53585372	G	A	SNP	ITGB7	ENST00000267082	human	ensembl	74_37	-1	known	missense	c.2365	p.R789C	0.004	pirsf_Integrin_bsu,pfam_Integrin_bsu_cyt_dom	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt_dom,pfam_EGF_extracell,superfamily_Plexin-like_fold,superfamily_Integrin_bsu_tail,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB7	HGNC	ENSG00000139626	tier1	rs141610554	-	46	0	0.00	40	15	27.27
ITPR3	0	genome.wustl.edu	37	6	33646233	33646233	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	33646233	33646233	G	A	SNP	ITPR3	ENST00000374316	human	ensembl	74_37	+1	known	silent	c.3684	p.T1228	0.002	pfam_Ca-rel_channel	pfam_Ca-rel_channel,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ARM-type_fold,smart_MIR_motif,prints_InsP3_rcpt-bd,pfscan_MIR_motif	-	no_errors	ITPR3	HGNC	ENSG00000096433	tier1	-	-	37	0	0.00	23	13	36.11
JAK3	0	genome.wustl.edu	37	19	17952208	17952208	+	Missense_Mutation	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	17952208	17952208	C	A	SNP	JAK3	ENST00000458235	human	ensembl	74_37	-1	known	missense	c.1132	p.G378C	1.000	smart_SH2,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,pfscan_Prot_kinase_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak3,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	JAK3	HGNC	ENSG00000105639	tier1	-	-	61	0	0.00	70	4	5.41
KCNG1	0	genome.wustl.edu	37	20	49626457	49626457	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	20	49626457	49626457	C	T	SNP	KCNG1	ENST00000371571	human	ensembl	74_37	-1	known	missense	c.419	p.R140H	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv3	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv6,prints_K_chnl_volt-dep_Kv9,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCNG1	HGNC	ENSG00000026559	tier1	-	-	50	0	0.00	51	19	27.14
KCNJ15	0	genome.wustl.edu	37	21	39671196	39671196	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	21	39671196	39671196	C	T	SNP	KCNJ15	ENST00000328656	human	ensembl	74_37	+1	known	missense	c.13	p.H5Y	0.002	pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.3	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.3,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir1.1	-	no_errors	KCNJ15	HGNC	ENSG00000157551	tier1	-	-	54	0	0.00	24	14	35.00
KCNN1	0	genome.wustl.edu	37	19	18096255	18096255	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	18096255	18096255	G	A	SNP	KCNN1	ENST00000222249	human	ensembl	74_37	+1	known	missense	c.1052	p.G351D	1.000	pfam_2pore_dom_K_chnl_dom	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN1	HGNC	ENSG00000105642	tier1	-	-	28	0	0.00	23	4	14.81
KCNN2	0	genome.wustl.edu	37	5	113740309	113740309	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	5	113740309	113740309	G	T	SNP	KCNN2	ENST00000264773	human	ensembl	74_37	+1	known	missense	c.757	p.D253Y	1.000	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN2	HGNC	ENSG00000080709	tier1	-	-	60	0	0.00	2	36	94.74
KIAA0319	0	genome.wustl.edu	37	6	24566864	24566864	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	24566864	24566864	G	A	SNP	KIAA0319	ENST00000378214	human	ensembl	74_37	-1	known	silent	c.2253	p.S751	1.000	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_Fibronectin_type3,smart_PKD/Chitinase_dom	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_MANSC_N,smart_Fibronectin_type3,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319	HGNC	ENSG00000137261				30	0	0.00	34	2	5.56
KIAA0319	0	genome.wustl.edu	37	6	24596453	24596453	+	Missense_Mutation	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	24596453	24596453	A	G	SNP	KIAA0319	ENST00000378214	human	ensembl	74_37	-1	known	missense	c.449	p.L150P	0.000	NULL	pfam_PKD/REJ-like,superfamily_PKD_dom,smart_MANSC_N,smart_Fibronectin_type3,smart_PKD/Chitinase_dom,pfscan_MANSC,pfscan_PKD_dom	-	no_errors	KIAA0319	HGNC	ENSG00000137261				30	0	0.00	32	2	5.88
KIAA0907	0	genome.wustl.edu	37	1	155891383	155891383	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	155891383	155891383	G	T	SNP	KIAA0907	ENST00000368321	human	ensembl	74_37	-1	known	missense	c.1049	p.P350H	1.000	NULL	NULL	-	no_errors	KIAA0907	HGNC	ENSG00000132680	tier1	-	-	41	0	0.00	38	4	9.52
KIAA1430	0	genome.wustl.edu	37	4	186112044	186112044	+	Missense_Mutation	SNP	A	A	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	186112044	186112044	A	T	SNP	KIAA1430	ENST00000296775	human	ensembl	74_37	-1	known	missense	c.307	p.L103M	0.000	NULL	NULL	-	no_errors	KIAA1430	HGNC	ENSG00000164323	tier1	-	-	51	0	0.00	31	23	42.59
KIAA1984-AS1	0	genome.wustl.edu	37	9	139701529	139701529	+	RNA	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	9	139701529	139701529	C	T	SNP	KIAA1984-AS1	ENST00000414656	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	KIAA1984-AS1	HGNC	ENSG00000228544				25	0	0.00	33	4	10.81
KIAA2018	0	genome.wustl.edu	37	3	113376116	113376116	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	113376116	113376116	C	T	SNP	KIAA2018	ENST00000316407	human	ensembl	74_37	-1	known	silent	c.4413	p.Q1471	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	KIAA2018	HGNC	ENSG00000176542	tier1	-	-	39	0	0.00	39	4	9.30
KIF22	0	genome.wustl.edu	37	16	29808342	29808342	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	29808342	29808342	C	T	SNP	KIF22	ENST00000160827	human	ensembl	74_37	+1	known	missense	c.199	p.R67W	0.988	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,superfamily_RuvA_2-like,smart_Kinesin_motor_dom,smart_Hlx-hairpin-Hlx_DNA-bd_motif,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF22	HGNC	ENSG00000079616	tier1	-	-	36	0	0.00	27	4	12.90
KLHL10	0	genome.wustl.edu	37	17	39998420	39998420	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	39998420	39998420	G	T	SNP	KLHL10	ENST00000293303	human	ensembl	74_37	+1	known	missense	c.540	p.E180D	1.000	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BACK,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL10	HGNC	ENSG00000161594	tier1	-	-	53	0	0.00	350	243	40.91
KRT1	0	genome.wustl.edu	37	12	53069172	53069172	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	12	53069172	53069172	G	A	SNP	KRT1	ENST00000252244	human	ensembl	74_37	-1	known	silent	c.1740	p.S580	0.005	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT1	HGNC	ENSG00000167768	tier1	-	-	75	0	0.00	36	42	53.85
LILRA2	0	genome.wustl.edu	37	19	55098837	55098837	+	RNA	SNP	T	T	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	55098837	55098837	T	G	SNP	LILRA2	ENST00000472992	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LILRA2	HGNC	ENSG00000239998	tier1	-	-	63	0	0.00	5	47	90.38
LIN37	0	genome.wustl.edu	37	19	36245292	36245292	+	Splice_Site	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	36245292	36245292	A	G	SNP	LIN37	ENST00000301159	human	ensembl	74_37	+1	known	splice_site	c.660-2	e9-2	1.000	-	-	-	no_errors	LIN37	HGNC	ENSG00000267796				35	0	0.00	28	2	6.67
LINGO1	0	genome.wustl.edu	37	15	77907093	77907093	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	15	77907093	77907093	G	A	SNP	LINGO1	ENST00000355300	human	ensembl	74_37	-1	known	missense	c.1156	p.R386W	1.000	NULL	pfam_Leu-rich_rpt,pfam_Ig_I-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LINGO1	HGNC	ENSG00000169783	tier1	-	-	69	0	0.00	73	32	30.48
LOC100127967	0	genome.wustl.edu	37	12	53003850	53003850	+	RNA	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	12	53003850	53003850	T	C	SNP	LOC100127967	ENST00000552364	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	RP11-641A6.2	Clone_based_vega_gene	ENSG00000257495	tier1	rs200370647	-	46	0	0.00	50	13	20.63
LOC100130950	0	genome.wustl.edu	37	17	5126838	5126839	+	RNA	INS	-	-	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	5126838	5126839	-	T	INS	LOC100130950	ENST00000575601	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	RP11-333E1.1	Clone_based_vega_gene	ENSG00000261879	tier1			51	0	0.00	42	8	16.00
LPHN3	0	genome.wustl.edu	37	4	62599270	62599270	+	Nonsense_Mutation	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	62599270	62599270	C	A	SNP	LPHN3	ENST00000507625	human	ensembl	74_37	+1	known	nonsense	c.1397	p.S466*	1.000	NULL	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN3	HGNC	ENSG00000150471	tier1	-	-	22	0	0.00	10	8	44.44
LRCH1	0	genome.wustl.edu	37	13	47275284	47275285	+	Frame_Shift_Ins	INS	-	-	AT			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	13	47275284	47275285	-	AT	INS	LRCH1	ENST00000389798	human	ensembl	74_37	+1	known	frame_shift_ins	c.1342_1343	p.A450fs	0.992:0.999	NULL	pfam_Leu-rich_rpt,pfam_CH-domain,pfam_CAMSAP_CH,superfamily_CH-domain,smart_Leu-rich_rpt_typical-subtyp,smart_CH-domain,pfscan_CH-domain	-	no_errors	LRCH1	HGNC	ENSG00000136141	tier1			27	0	0.00	28	14	33.33
LRFN5	0	genome.wustl.edu	37	14	42356204	42356204	+	Missense_Mutation	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	14	42356204	42356204	C	A	SNP	LRFN5	ENST00000298119	human	ensembl	74_37	+1	known	missense	c.376	p.H126N	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN5	HGNC	ENSG00000165379	tier1	-	-	42	0	0.00	25	15	37.50
LRRC38	0	genome.wustl.edu	37	1	13839644	13839644	+	Nonsense_Mutation	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	13839644	13839644	C	A	SNP	LRRC38	ENST00000376085	human	ensembl	74_37	-1	known	nonsense	c.445	p.E149*	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	LRRC38	HGNC	ENSG00000162494	tier1	-	-	92	0	0.00	38	32	45.71
LRRC4C	0	genome.wustl.edu	37	11	40136997	40136997	+	Silent	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	11	40136997	40136997	C	A	SNP	LRRC4C	ENST00000527150	human	ensembl	74_37	-1	known	silent	c.846	p.L282	1.000	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	LRRC4C	HGNC	ENSG00000148948	tier1	-	-	28	0	0.00	3	24	88.89
LY75	0	genome.wustl.edu	37	2	160735803	160735803	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	160735803	160735803	G	A	SNP	LY75	ENST00000554112	human	ensembl	74_37	-1	known	silent	c.1482	p.D494	0.024	NULL	pfam_C-type_lectin,pfam_FN_type2_col-bd,superfamily_C-type_lectin_fold,superfamily_Ricin_B_lectin,superfamily_Kringle-like,smart_Ricin_B_lectin,smart_FN_type2_col-bd,smart_C-type_lectin,pfscan_FN_type2_col-bd,pfscan_C-type_lectin,pfscan_Ricin_B_lectin	-	no_errors	LY75	HGNC	ENSG00000054219	tier1	rs141523249	-	42	0	0.00	40	13	24.53
LY86	0	genome.wustl.edu	37	6	6589069	6589069	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	6589069	6589069	C	T	SNP	LY86	ENST00000230568	human	ensembl	74_37	+1	known	silent	c.102	p.S34	0.001	NULL	pfam_ML_dom,superfamily_Ig_E-set,smart_ML_dom	-	no_errors	LY86	HGNC	ENSG00000112799	tier1	rs144373281	-	61	0	0.00	35	17	32.69
MAFF	0	genome.wustl.edu	37	22	38610597	38610597	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	22	38610597	38610597	C	T	SNP	MAFF	ENST00000338483	human	ensembl	74_37	+1	known	silent	c.207	p.R69	0.999	pfam_bZIP_Maf,smart_bZIP,pfscan_bZIP	pfam_bZIP_Maf,superfamily_TF_DNA-bd,smart_bZIP,pfscan_bZIP	-	no_errors	MAFF	HGNC	ENSG00000185022	tier1	-	-	41	0	0.00	41	10	19.61
MALAT1	0	genome.wustl.edu	37	11	65268480	65268480	+	RNA	DEL	T	T	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	11	65268480	65268480	T	-	DEL	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562	tier1			51	0	0.00	34	6	15.00
MBD2	0	genome.wustl.edu	37	18	51690975	51690975	+	Frame_Shift_Del	DEL	C	C	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	18	51690975	51690975	C	-	DEL	MBD2	ENST00000256429	human	ensembl	74_37	-1	known	frame_shift_del	c.1027	p.A343fs	1.000	NULL	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD2	HGNC	ENSG00000134046	tier1			53	0	0.00	17	2	10.53
MESDC2	0	genome.wustl.edu	37	15	81271765	81271765	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	15	81271765	81271765	G	T	SNP	MESDC2	ENST00000261758	human	ensembl	74_37	-1	known	missense	c.500	p.A167D	1.000	pfam_Mesoderm_development_cand-2	pfam_Mesoderm_development_cand-2	-	no_errors	MESDC2	HGNC	ENSG00000117899				33	0	0.00	34	4	10.53
METTL17	0	genome.wustl.edu	37	14	21464788	21464788	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	14	21464788	21464788	C	T	SNP	METTL17	ENST00000382985	human	ensembl	74_37	+1	known	missense	c.1183	p.R395W	0.730	pfam_Ribosomal_Rsm22_bac-type	pfam_Ribosomal_Rsm22_bac-type,pfam_Methyltransf_11	-	no_errors	METTL17	HGNC	ENSG00000165792	tier1	rs148330410	-	23	0	0.00	10	25	71.43
MICAL3	0	genome.wustl.edu	37	22	18301005	18301005	+	Frame_Shift_Del	DEL	C	C	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	22	18301005	18301005	C	-	DEL	MICAL3	ENST00000441493	human	ensembl	74_37	-1	known	frame_shift_del	c.4422	p.K1475fs	0.983	NULL	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,pfam_mOase_FAD-bd,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM,prints_Rng_hydrolase-like	-	no_errors	MICAL3	HGNC	ENSG00000243156	tier1			16	0	0.00	7	8	53.33
MIER2	0	genome.wustl.edu	37	19	311876	311876	+	Frame_Shift_Del	DEL	C	C	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	311876	311876	C	-	DEL	MIER2	ENST00000264819	human	ensembl	74_37	-1	known	frame_shift_del	c.953	p.G318fs	1.000	superfamily_Homeodomain-like,smart_SANT/Myb	pfam_ELM2_dom,superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_ELM2_dom	-	no_errors	MIER2	HGNC	ENSG00000105556	tier1			40	0	0.00	8	2	20.00
MIR302C	0	genome.wustl.edu	37	4	113569548	113569548	+	RNA	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	113569548	113569548	T	C	SNP	MIR302C	ENST00000362232	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.979	-	-	-	no_errors	MIR302C	HGNC	ENSG00000199102	tier1	-	-	46	0	0.00	20	18	47.37
MIR378B	0	genome.wustl.edu	37	3	10371963	10371964	+	RNA	DEL	AA	AA	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	10371963	10371964	AA	-	DEL	MIR378B	ENST00000578876	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	MIR378B	HGNC	ENSG00000264534	tier1			35	0	0.00	28	11	28.21
MIR600HG	0	genome.wustl.edu	37	9	125874872	125874872	+	RNA	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	9	125874872	125874872	C	A	SNP	MIR600HG	ENST00000449175	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	MIR600HG	HGNC	ENSG00000236901	tier1	-	-	59	0	0.00	55	21	27.63
MKI67	0	genome.wustl.edu	37	10	129906796	129906796	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	129906796	129906796	G	A	SNP	MKI67	ENST00000368654	human	ensembl	74_37	-1	known	missense	c.3308	p.A1103V	0.000	pfam_K167R	pfam_K167R,pfam_FHA_dom,superfamily_SMAD_FHA_domain,smart_FHA_dom,pfscan_FHA_dom	-	no_errors	MKI67	HGNC	ENSG00000148773	tier1	-	-	84	0	0.00	69	4	5.48
MMP23B	0	genome.wustl.edu	37	1	1569848	1569849	+	Frame_Shift_Ins	INS	-	-	CT			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	1569848	1569849	0	CT	INS	MMP23B	ENST00000356026	human	ensembl	74_37	+1	known	frame_shift_ins	c.1020_1021	p.E341fs	0.997:1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_Pept_M10_metallopeptidase,pfam_ShK_toxin,smart_Peptidase_Metallo,smart_ShK_toxin,smart_Ig_sub,pfscan_Ig-like_dom,prints_Pept_M10A	-	no_errors	MMP23B	HGNC	ENSG00000189409				9	0	0.00	4	4	50.00
MOCS1	0	genome.wustl.edu	37	6	39880077	39880077	+	Missense_Mutation	SNP	G	G	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	39880077	39880077	G	C	SNP	MOCS1	ENST00000340692	human	ensembl	74_37	-1	known	missense	c.912	p.I304M	1.000	pfam_Mob_synth_C,tigrfam_MoaA	pfam_Mopterin_CF_biosynth-C_dom,pfam_Mob_synth_C,pfam_rSAM,superfamily_Mopterin_CF_biosynth-C_dom,smart_Elp3/MiaB/NifB,tigrfam_MoaA,tigrfam_Mo_CF_biosynth-C	-	no_errors	MOCS1	HGNC	ENSG00000124615	tier1	-	-	65	0	0.00	51	13	20.31
MOSPD2	0	genome.wustl.edu	37	X	14891844	14891844	+	Nonsense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	X	14891844	14891844	G	T	SNP	MOSPD2	ENST00000380492	human	ensembl	74_37	+1	known	nonsense	c.43	p.E15*	0.998	superfamily_CRAL/TRIO_N_dom	pfam_CRAL-TRIO_dom,pfam_MSP_dom,superfamily_CRAL-TRIO_dom,superfamily_PapD-like,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_MSP_dom	-	no_errors	MOSPD2	HGNC	ENSG00000130150	tier1	-	-	33	0	0.00	57	4	6.56
MPG	0	genome.wustl.edu	37	16	135445	135445	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	135445	135445	G	A	SNP	MPG	ENST00000219431	human	ensembl	74_37	+1	known	missense	c.566	p.G189D	1.000	pfam_PurDNA_glycsylse,superfamily_Formyl_transferase_C-like,tigrfam_PurDNA_glycsylse	pfam_PurDNA_glycsylse,superfamily_Formyl_transferase_C-like,tigrfam_PurDNA_glycsylse	-	no_errors	MPG	HGNC	ENSG00000103152	tier1	-	-	66	0	0.00	24	28	53.85
MRPS5	0	genome.wustl.edu	37	2	95780886	95780886	+	Nonsense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	95780886	95780886	G	A	SNP	MRPS5	ENST00000272418	human	ensembl	74_37	-1	known	nonsense	c.202	p.Q68*	0.971	NULL	pfam_Ribosomal_S5_C,pfam_Ribosomal_S5_N,superfamily_Ribosomal_S5_D2-typ_fold,pfscan_Ribosomal_S5_N	-	no_errors	MRPS5	HGNC	ENSG00000144029	tier1	-	-	42	0	0.00	61	4	6.06
MSH3	0	genome.wustl.edu	37	5	79968645	79968645	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	5	79968645	79968645	C	T	SNP	MSH3	ENST00000265081	human	ensembl	74_37	+1	known	missense	c.995	p.A332V	1.000	pfam_DNA_mismatch_repair_MutS-lik_N,superfamily_DNA_mismatch_repair_MutS_N	pfam_DNA_mismatch_repair_MutS_C,pfam_DNA_mismatch_repair_MutS_core,pfam_DNA_mmatch_repair_MutS_con_dom,pfam_DNA_mismatch_repair_MutS-lik_N,pfam_DNA_mismatch_repair_MutS_clamp,superfamily_DNA_mismatch_repair_MutS_core,superfamily_P-loop_NTPase,superfamily_DNA_mismatch_repair_MutS_N,superfamily_DNA_mmatch_repair_MutS_con_dom,smart_DNA_mismatch_repair_MutS_core,smart_DNA_mismatch_repair_MutS_C	-	no_errors	MSH3	HGNC	ENSG00000113318	tier1	-	-	70	0	0.00	5	42	89.36
MSTN	0	genome.wustl.edu	37	2	190927070	190927070	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	190927070	190927070	G	A	SNP	MSTN	ENST00000260950	human	ensembl	74_37	-1	known	missense	c.253	p.P85S	1.000	pfam_TGF-b_N	pfam_TGF-b_N,pfam_TGF-b_C,smart_TGF-b_C	-	no_errors	MSTN	HGNC	ENSG00000138379	tier1	-	-	64	0	0.00	33	30	47.62
MT-ND5	0	genome.wustl.edu	37	MT	13957	13957	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	MT	13957	13957	G	A	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	missense	c.1621	p.G541S	NULL	pfam_NADH_DH_su5_C	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1	-	-	14	0	0.00	0	37	97.37
MTMR3	0	genome.wustl.edu	37	22	30414045	30414045	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	22	30414045	30414045	G	T	SNP	MTMR3	ENST00000401950	human	ensembl	74_37	+1	known	missense	c.1804	p.D602Y	1.000	NULL	pfam_Myotubularin-like_Pase_dom,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Tyr_Pase_cat,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	MTMR3	HGNC	ENSG00000100330	tier1	-	-	39	0	0.00	58	28	32.56
MTR	0	genome.wustl.edu	37	1	237025632	237025632	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	237025632	237025632	G	A	SNP	MTR	ENST00000366577	human	ensembl	74_37	+1	known	missense	c.2293	p.V765I	0.000	pirsf_MetH,tigrfam_MetH	pfam_S_MeTrfase,pfam_VitB12-dep_Met_synth_activ_dom,pfam_Pterin-binding,pfam_Cbl-bd_cap,pfam_Cobalamin-bd,superfamily_VitB12-dep_Met_synth_activ_dom,superfamily_S_MeTrfase,superfamily_Dihydropteroate_synth-like,superfamily_Cobalamin-bd,superfamily_Cbl-bd_cap,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom,pfscan_S_MeTrfase,pfscan_Pterin-binding,tigrfam_MetH	-	no_errors	MTR	HGNC	ENSG00000116984	tier1	-	-	84	0	0.00	58	4	6.45
MTR	0	genome.wustl.edu	37	1	237026804	237026804	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	237026804	237026804	C	T	SNP	MTR	ENST00000366577	human	ensembl	74_37	+1	known	silent	c.2355	p.H785	0.111	pfam_Cobalamin-bd,superfamily_Cobalamin-bd,pirsf_MetH,tigrfam_MetH	pfam_S_MeTrfase,pfam_VitB12-dep_Met_synth_activ_dom,pfam_Pterin-binding,pfam_Cbl-bd_cap,pfam_Cobalamin-bd,superfamily_VitB12-dep_Met_synth_activ_dom,superfamily_S_MeTrfase,superfamily_Dihydropteroate_synth-like,superfamily_Cobalamin-bd,superfamily_Cbl-bd_cap,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom,pfscan_S_MeTrfase,pfscan_Pterin-binding,tigrfam_MetH	-	no_errors	MTR	HGNC	ENSG00000116984				85	0	0.00	44	4	8.33
MUC6	0	genome.wustl.edu	37	11	1030955	1030955	+	Missense_Mutation	SNP	C	C	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	11	1030955	1030955	C	G	SNP	MUC6	ENST00000421673	human	ensembl	74_37	-1	known	missense	c.676	p.A226P	0.011	smart_Unchr_dom_Cys-rich	pfam_VWF_type-D,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_Cys_knot_C,pfscan_Cys_knot_C	-	no_errors	MUC6	HGNC	ENSG00000184956	tier1	-	-	84	0	0.00	5	8	61.54
MYCT1	0	genome.wustl.edu	37	6	153042927	153042927	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	153042927	153042927	G	A	SNP	MYCT1	ENST00000367245	human	ensembl	74_37	+1	known	missense	c.247	p.G83R	1.000	NULL	NULL	-	no_errors	MYCT1	HGNC	ENSG00000120279	tier1	-	-	54	0	0.00	28	14	33.33
MYH1	0	genome.wustl.edu	37	17	10404047	10404047	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	10404047	10404047	C	T	SNP	MYH1	ENST00000226207	human	ensembl	74_37	-1	known	missense	c.3761	p.R1254H	1.000	pfam_Myosin_tail,superfamily_Prefoldin	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_tRNA-bd_arm,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH1	HGNC	ENSG00000109061	tier1	-	-	67	0	0.00	38	31	44.93
MYPN	0	genome.wustl.edu	37	10	69881862	69881862	+	Nonsense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	69881862	69881862	G	T	SNP	MYPN	ENST00000358913	human	ensembl	74_37	+1	known	nonsense	c.667	p.E223*	1.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	MYPN	HGNC	ENSG00000138347				34	0	0.00	52	3	5.45
NASP	0	genome.wustl.edu	37	1	46073323	46073323	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	46073323	46073323	G	A	SNP	NASP	ENST00000402363	human	ensembl	74_37	+1	known	missense	c.746	p.G249E	0.008	NULL	pfam_Tetratricopeptide_SHNi-TPR_dom,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NASP	HGNC	ENSG00000132780				52	0	0.00	26	2	7.14
NCOR1	0	genome.wustl.edu	37	17	16040727	16040727	+	Splice_Site	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	16040727	16040727	C	A	SNP	NCOR1	ENST00000268712	human	ensembl	74_37	-1	known	splice_site	c.1408-1	e13-1	1.000	-	-	-	no_errors	NCOR1	HGNC	ENSG00000141027				30	0	0.00	25	3	10.71
NCR1	0	genome.wustl.edu	37	19	55424098	55424098	+	Silent	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	55424098	55424098	G	T	SNP	NCR1	ENST00000291890	human	ensembl	74_37	+1	known	silent	c.774	p.R258	0.000	NULL	smart_Ig_sub	-	no_errors	NCR1	HGNC	ENSG00000189430	tier1	-	-	55	0	0.00	5	37	88.10
NEIL2	0	genome.wustl.edu	37	8	11640908	11640908	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	8	11640908	11640908	G	A	SNP	NEIL2	ENST00000284503	human	ensembl	74_37	+1	known	missense	c.688	p.G230R	1.000	pfam_DNA_glyclase/AP_lyase_DNA-bd,superfamily_Ribosomal_S13-like_H2TH	pfam_DNA_glyclase/AP_lyase_DNA-bd,pfam_DNA_glycosylase/AP_lyase_cat,superfamily_Ribosomal_S13-like_H2TH,pfscan_Znf_DNA_glyclase/AP_lyase,pfscan_DNA_glycosylase/AP_lyase_cat	-	no_errors	NEIL2	HGNC	ENSG00000154328	tier1	-	-	21	0	0.00	4	8	66.67
NEUROG1	0	genome.wustl.edu	37	5	134871157	134871157	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	5	134871157	134871157	C	T	SNP	NEUROG1	ENST00000314744	human	ensembl	74_37	-1	known	missense	c.224	p.R75H	0.573	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	NEUROG1	HGNC	ENSG00000181965	tier1	-	-	23	0	0.00	0	19	100.00
NLRP12	0	genome.wustl.edu	37	19	54307316	54307316	+	Silent	SNP	G	G	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	54307316	54307316	G	C	SNP	NLRP12	ENST00000324134	human	ensembl	74_37	-1	known	silent	c.2475	p.T825	0.962	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP12	HGNC	ENSG00000142405	tier1	-	-	27	0	0.00	16	4	20.00
NMD3	0	genome.wustl.edu	37	3	160956549	160956549	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	160956549	160956549	G	T	SNP	NMD3	ENST00000351193	human	ensembl	74_37	+1	known	missense	c.688	p.D230Y	1.000	pfam_NMD3	pfam_NMD3	-	no_errors	NMD3	HGNC	ENSG00000169251	tier1	-	-	55	0	0.00	54	4	6.90
NRD1	0	genome.wustl.edu	37	1	52344164	52344164	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	52344164	52344164	C	T	SNP	NRD1	ENST00000354831	human	ensembl	74_37	-1	known	missense	c.124	p.A42T	0.293	NULL	pfam_Pept_M16_N,pfam_Peptidase_M16_C,superfamily_Metalloenz_LuxS/M16	-	no_errors	NRD1	HGNC	ENSG00000078618				51	0	0.00	45	3	6.25
NRXN1	0	genome.wustl.edu	37	2	50463983	50463983	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	50463983	50463983	C	T	SNP	NRXN1	ENST00000402717	human	ensembl	74_37	-1	known	missense	c.3466	p.V1156I	0.867	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,smart_EG-like_dom,smart_Neurexin-like,pfscan_EG-like_dom,pfscan_Laminin_G	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	rs201881725	-	60	0	0.00	30	20	40.00
NTRK3	0	genome.wustl.edu	37	15	88726700	88726700	+	Missense_Mutation	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	15	88726700	88726700	A	G	SNP	NTRK3	ENST00000360948	human	ensembl	74_37	-1	known	missense	c.344	p.L115P	0.999	prints_Tyr_kinase_NGF_rcpt	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_LRR-contain_N,superfamily_Kinase-like_dom,smart_LRR-contain_N,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,prints_Tyr_kinase_NGF_rcpt,prints_Tyr_kin_neurotrophic_rcpt_3,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	NTRK3	HGNC	ENSG00000140538	tier1	-	-	49	0	0.00	19	35	64.81
NUDCD1	0	genome.wustl.edu	37	8	110346185	110346185	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	8	110346185	110346185	G	T	SNP	NUDCD1	ENST00000239690	human	ensembl	74_37	-1	known	missense	c.55	p.R19S	1.000	NULL	pfam_CS_dom,superfamily_HSP20-like_chaperone,pfscan_CS_dom	-	no_errors	NUDCD1	HGNC	ENSG00000120526	tier1	-	-	39	0	0.00	50	4	7.41
NUP205	0	genome.wustl.edu	37	7	135255911	135255911	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	7	135255911	135255911	G	T	SNP	NUP205	ENST00000285968	human	ensembl	74_37	+1	known	missense	c.87	p.W29C	1.000	pfam_Nup186/Nup192/Nup205	pfam_Nup186/Nup192/Nup205	-	no_errors	NUP205	HGNC	ENSG00000155561	tier1	-	-	56	0	0.00	56	4	6.67
NWD1	0	genome.wustl.edu	37	19	16902312	16902312	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	16902312	16902312	C	T	SNP	NWD1	ENST00000379808	human	ensembl	74_37	+1	known	missense	c.3092	p.T1031M	0.038	superfamily_WD40_repeat_dom,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NWD1	HGNC	ENSG00000188039				40	0	0.00	28	2	6.67
OAT	0	genome.wustl.edu	37	10	126090410	126090410	+	Splice_Site	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	126090410	126090410	T	C	SNP	OAT	ENST00000368845	human	ensembl	74_37	-1	known	splice_site	c.901-2	e7-2	1.000	-	-	-	no_errors	OAT	HGNC	ENSG00000065154	tier1	-	-	38	0	0.00	44	4	8.33
OR2C3	0	genome.wustl.edu	37	1	247695139	247695139	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	247695139	247695139	G	A	SNP	OR2C3	ENST00000366487	human	ensembl	74_37	-1	known	silent	c.675	p.A225	0.347	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2C3	HGNC	ENSG00000196242	tier1	rs149975458	-	40	0	0.00	27	10	27.03
OR2T33	0	genome.wustl.edu	37	1	248436538	248436538	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	248436538	248436538	G	A	SNP	OR2T33	ENST00000318021	human	ensembl	74_37	-1	known	silent	c.579	p.F193	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T33	HGNC	ENSG00000177212	tier1	-	-	36	0	0.00	44	14	24.14
OR2T8	0	genome.wustl.edu	37	1	248084898	248084898	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	248084898	248084898	C	T	SNP	OR2T8	ENST00000319968	human	ensembl	74_37	+1	known	silent	c.579	p.F193	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T8	HGNC	ENSG00000177462	tier1	-	-	29	0	0.00	27	5	15.62
OR5M3	0	genome.wustl.edu	37	11	56237202	56237202	+	Missense_Mutation	SNP	G	G	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	11	56237202	56237202	G	C	SNP	OR5M3	ENST00000312240	human	ensembl	74_37	-1	known	missense	c.772	p.L258V	0.039	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5M3	HGNC	ENSG00000174937	tier1	rs148918177	-	42	0	0.00	3	32	91.43
OS9	0	genome.wustl.edu	37	12	58111997	58111997	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	12	58111997	58111997	G	T	SNP	OS9	ENST00000315970	human	ensembl	74_37	+1	known	missense	c.1203	p.E401D	0.006	NULL	pfam_PRKCSH,superfamily_Man6P_isomerase_rcpt-bd_dom	-	no_errors	OS9	HGNC	ENSG00000135506				24	0	0.00	36	2	5.26
PAPPA	0	genome.wustl.edu	37	9	119109306	119109306	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	9	119109306	119109306	C	T	SNP	PAPPA	ENST00000328252	human	ensembl	74_37	+1	known	missense	c.3782	p.T1261M	0.000	superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,pfam_Notch_dom,pfam_Peptidase_M43,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Fibronectin_type3,superfamily_Notch_dom,smart_LamG-like,smart_Notch_dom,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP,tigrfam_Myxo_disulph_rpt	-	no_errors	PAPPA	HGNC	ENSG00000182752	tier1	-	-	51	0	0.00	12	38	76.00
PATZ1	0	genome.wustl.edu	37	22	31724828	31724828	+	Missense_Mutation	SNP	C	C	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	22	31724828	31724828	C	G	SNP	PATZ1	ENST00000266269	human	ensembl	74_37	-1	known	missense	c.1590	p.E530D	1.000	NULL	pfam_Znf_C2H2,pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	PATZ1	HGNC	ENSG00000100105	tier1	-	-	48	0	0.00	54	10	15.15
PCDH10	0	genome.wustl.edu	37	4	134073569	134073571	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	CTG	CTG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	134073569	134073571	CTG	-	DEL	PCDH10	ENST00000264360	human	ensembl	74_37	+1	known	in_frame_del	c.2274_2276	p.C762in_frame_del	0.999:1.000:1.000	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH10	HGNC	ENSG00000138650	tier1			50	0	0.00	32	6	15.79
PCDHA11	0	genome.wustl.edu	37	5	140250534	140250534	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	5	140250534	140250534	G	A	SNP	PCDHA11	ENST00000398640	human	ensembl	74_37	+1	known	missense	c.1846	p.G616S	0.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA11	HGNC	ENSG00000249158	tier1	-	-	138	0	0.00	85	61	41.50
PCDHGB7	0	genome.wustl.edu	37	5	140798649	140798649	+	Missense_Mutation	SNP	A	A	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	5	140798649	140798649	A	C	SNP	PCDHGB7	ENST00000398594	human	ensembl	74_37	+1	known	missense	c.1223	p.E408A	0.358	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGB7	HGNC	ENSG00000254122	tier1	-	-	25	0	0.00	8	12	60.00
PCID2	0	genome.wustl.edu	37	13	113834524	113834525	+	In_Frame_Ins	INS	-	-	TTC			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	13	113834524	113834525	-	TTC	INS	PCID2	ENST00000246505	human	ensembl	74_37	-1	known	in_frame_ins	c.970_969	p.323in_frame_insE	1.000:1.000	smart_PAM	pfam_PCI_dom,smart_PAM	-	no_errors	PCID2	HGNC	ENSG00000126226	tier1			56	0	0.00	62	15	19.48
PCLO	0	genome.wustl.edu	37	7	82546042	82546042	+	Frame_Shift_Del	DEL	T	T	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	7	82546042	82546042	T	-	DEL	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	frame_shift_del	c.11260	p.T3754fs	1.000	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1			66	0	0.00	22	27	55.10
PDE4DIP	0	genome.wustl.edu	37	1	144921977	144921977	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	144921977	144921977	C	T	SNP	PDE4DIP	ENST00000369356	human	ensembl	74_37	-1	known	missense	c.1052	p.S351N	1.000	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	tier1	-	-	112	0	0.00	71	4	5.33
PHKG2	0	genome.wustl.edu	37	16	30764777	30764777	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	30764777	30764777	G	T	SNP	PHKG2	ENST00000563588	human	ensembl	74_37	+1	known	missense	c.455	p.R152L	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Phosph_kin_gamma,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	PHKG2	HGNC	ENSG00000156873				46	0	0.00	34	2	5.56
PHLDB2	0	genome.wustl.edu	37	3	111688671	111688671	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	111688671	111688671	C	T	SNP	PHLDB2	ENST00000393925	human	ensembl	74_37	+1	known	silent	c.3450	p.L1150	0.995	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB2	HGNC	ENSG00000144824				47	0	0.00	57	3	5.00
PKD1	0	genome.wustl.edu	37	16	2161095	2161095	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	2161095	2161095	G	A	SNP	PKD1	ENST00000262304	human	ensembl	74_37	-1	known	missense	c.4073	p.A1358V	0.189	pfam_PKD_dom,superfamily_PKD_dom,smart_PKD/Chitinase_dom,pfscan_PKD_dom,tigrfam_Polycystin_cat	pfam_PKD_dom,pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_C-type_lectin,pfam_WSC_carb-bd,pfam_GPS_dom,superfamily_C-type_lectin_fold,superfamily_Lipase_LipOase,superfamily_PKD_dom,superfamily_Fe_hydrogenase,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_WSC_carb-bd_subgr,smart_PKD/Chitinase_dom,smart_C-type_lectin,smart_GPS_dom,smart_PLAT/LH2_dom,prints_PKD_1,pfscan_GPS_dom,pfscan_C-type_lectin,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,pfscan_WSC_carb-bd,tigrfam_Polycystin_cat	-	no_errors	PKD1	HGNC	ENSG00000008710	tier1	-	-	111	0	0.00	64	41	39.05
PKD1L1	0	genome.wustl.edu	37	7	47969077	47969077	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	7	47969077	47969077	C	T	SNP	PKD1L1	ENST00000289672	human	ensembl	74_37	-1	known	missense	c.784	p.A262T	0.000	NULL	pfam_PKD/REJ-like,pfam_PKD1_2_channel,pfam_PKD_dom,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,superfamily_PKD_dom,smart_PKD/Chitinase_dom,smart_PLAT/LH2_dom,pfscan_PKD_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like	-	no_errors	PKD1L1	HGNC	ENSG00000158683				31	0	0.00	54	4	6.90
PKLR	0	genome.wustl.edu	37	1	155270054	155270054	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	155270054	155270054	G	A	SNP	PKLR	ENST00000342741	human	ensembl	74_37	-1	known	missense	c.118	p.R40W	0.009	NULL	pfam_Pyrv_Knase_brl,pfam_Pyrv_Knase_C,superfamily_Pyrv/PenolPyrv_Kinase-like_dom,superfamily_Pyrv_Knase_C,superfamily_Pyrv_Knase-like_insert_dom,prints_Pyr_Knase,tigrfam_Pyr_Knase	-	no_errors	PKLR	HGNC	ENSG00000143627				24	0	0.00	34	4	10.53
PLCG2	0	genome.wustl.edu	37	16	81934352	81934352	+	Silent	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	81934352	81934352	G	T	SNP	PLCG2	ENST00000359376	human	ensembl	74_37	+1	known	silent	c.1329	p.S443	0.047	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pirsf_PLC-gamma,pfscan_PLipase_C_PInositol-sp_X_dom,prints_Pinositol_PLipase_C	pfam_PLipase_C_PInositol-sp_X_dom,pfam_SH2,pfam_PLipase_C_Pinositol-sp_Y,pfam_SH3_domain,pfam_C2_dom,pfam_PLipase_C_EF-hand-like,pfam_SH3_2,superfamily_PLC-like_Pdiesterase_TIM-brl,superfamily_C2_dom,superfamily_SH3_domain,smart_Pleckstrin_homology,smart_PLipase_C_PInositol-sp_X_dom,smart_SH2,smart_SH3_domain,smart_PLipase_C_Pinositol-sp_Y,smart_C2_dom,pirsf_PLC-gamma,pfscan_C2_dom,pfscan_Pleckstrin_homology,pfscan_SH2,pfscan_SH3_domain,pfscan_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_Pinositol-sp_Y,prints_Pinositol_PLipase_C,prints_SH2,prints_SH3_domain	-	no_errors	PLCG2	HGNC	ENSG00000197943				50	0	0.00	39	3	7.14
PLD1	0	genome.wustl.edu	37	3	171455451	171455452	+	Splice_Site	INS	-	-	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	171455451	171455452	-	A	INS	PLD1	ENST00000351298	human	ensembl	74_37	-1	known	splice_site_ins	c.161-3_161-2	e2-2	0.999:0.901	-	-	-	no_errors	PLD1	HGNC	ENSG00000075651	tier1			22	0	0.00	26	3	10.34
PLEKHN1	0	genome.wustl.edu	37	1	908701	908701	+	Missense_Mutation	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	908701	908701	A	G	SNP	PLEKHN1	ENST00000379409	human	ensembl	74_37	+1	known	missense	c.1444	p.T482A	0.994	NULL	smart_Pleckstrin_homology	-	no_errors	PLEKHN1	HGNC	ENSG00000187583	tier1	-	-	78	0	0.00	32	30	48.39
PLXNB2	0	genome.wustl.edu	37	22	50716391	50716391	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	22	50716391	50716391	C	T	SNP	PLXNB2	ENST00000359337	human	ensembl	74_37	-1	known	missense	c.4939	p.G1647R	0.034	pfam_Plexin_cytoplasmic_RasGAP_dom,superfamily_Rho_GTPase_activation_prot	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_IPT,pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNB2	HGNC	ENSG00000196576	tier1	-	-	44	0	0.00	46	11	19.30
PNLIPRP3	0	genome.wustl.edu	37	10	118236283	118236283	+	Missense_Mutation	SNP	A	A	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	118236283	118236283	A	C	SNP	PNLIPRP3	ENST00000369230	human	ensembl	74_37	+1	known	missense	c.1292	p.K431T	0.620	pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,pirsf_Lipoprotein_lipase_LIPH	pfam_Lipase_N,pfam_PLAT/LH2_dom,superfamily_Lipase_LipOase,pirsf_Lipoprotein_lipase_LIPH,prints_Lipase,prints_Lipase_panc	-	no_errors	PNLIPRP3	HGNC	ENSG00000203837	tier1	-	-	61	0	0.00	30	53	63.86
POM121L9P	0	genome.wustl.edu	37	22	24659950	24659950	+	RNA	DEL	C	C	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	22	24659950	24659950	C	-	DEL	POM121L9P	ENST00000414583	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	POM121L9P	HGNC	ENSG00000128262	tier1			19	0	0.00	22	3	12.00
PPP4C	0	genome.wustl.edu	37	16	30087741	30087741	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	30087741	30087741	C	T	SNP	PPP4C	ENST00000279387	human	ensembl	74_37	+1	known	missense	c.43	p.R15C	0.998	NULL	pfam_PEstase_dom,smart_Ser/Thr-sp_prot-phosphatase,prints_Ser/Thr-sp_prot-phosphatase	-	no_errors	PPP4C	HGNC	ENSG00000149923	tier1	-	-	73	0	0.00	60	5	7.69
PRDM15	0	genome.wustl.edu	37	21	43259831	43259831	+	Missense_Mutation	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	21	43259831	43259831	C	A	SNP	PRDM15	ENST00000269844	human	ensembl	74_37	-1	known	missense	c.1870	p.A624S	0.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2	-	no_errors	PRDM15	HGNC	ENSG00000141956	tier1	-	-	60	0	0.00	53	4	6.90
PRIM2	0	genome.wustl.edu	37	6	57498976	57498976	+	RNA	SNP	T	T	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	57498976	57498976	T	G	SNP	PRIM2	ENST00000389488	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.965	-	-	-	no_errors	PRIM2	HGNC	ENSG00000146143	tier1	-	-	141	0	0.00	156	19	10.86
PRKDC	0	genome.wustl.edu	37	8	48744396	48744396	+	Silent	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	8	48744396	48744396	A	G	SNP	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	silent	c.8241	p.V2747	0.004	NULL	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1	-	-	79	0	0.00	33	38	53.52
PROKR2	0	genome.wustl.edu	37	20	5294626	5294626	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	20	5294626	5294626	G	A	SNP	PROKR2	ENST00000217270	human	ensembl	74_37	-1	known	silent	c.390	p.S130	0.410	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	PROKR2	HGNC	ENSG00000101292	tier1	rs144778137	-	58	0	0.00	67	4	5.63
PRSS23	0	genome.wustl.edu	37	11	86662289	86662289	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	11	86662289	86662289	C	T	SNP	PRSS23	ENST00000533902	human	ensembl	74_37	+1	putative	missense	c.238	p.R80C	0.205	NULL	NULL	-	no_errors	PRSS23	HGNC	ENSG00000150687				74	0	0.00	37	3	7.50
PSMC4	0	genome.wustl.edu	37	19	40486024	40486024	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	40486024	40486024	G	T	SNP	PSMC4	ENST00000157812	human	ensembl	74_37	+1	known	missense	c.889	p.D297Y	1.000	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	pfam_ATPase_AAA_core,pfam_ATPase_dyneun-rel_AAA,pfam_ATPase_AAA-2,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_26S_Psome_P45	-	no_errors	PSMC4	HGNC	ENSG00000013275	tier1	-	-	60	0	0.00	42	4	8.70
PTCHD2	0	genome.wustl.edu	37	1	11589626	11589626	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	11589626	11589626	G	A	SNP	PTCHD2	ENST00000294484	human	ensembl	74_37	+1	known	missense	c.2812	p.A938T	1.000	NULL	pfam_Patched,pfam_MMPL_dom,pfscan_SSD	-	no_errors	PTCHD2	HGNC	ENSG00000204624	tier1	-	-	55	0	0.00	23	14	37.84
PTPLA	0	genome.wustl.edu	37	10	17646048	17646049	+	Splice_Site	INS	-	-	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	17646048	17646049	-	A	INS	PTPLA	ENST00000361271	human	ensembl	74_37	-1	known	splice_site_ins	c.258-3_258-2	e2-2	1.000:0.005	-	-	-	no_errors	PTPLA	HGNC	ENSG00000165996	tier1			21	0	0.00	32	2	5.88
RAB40C	0	genome.wustl.edu	37	16	675941	675941	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	675941	675941	C	T	SNP	RAB40C	ENST00000248139	human	ensembl	74_37	+1	known	missense	c.385	p.H129Y	1.000	pfam_Small_GTPase,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_SOCS_C,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,smart_SOCS_C,pfscan_SOCS_C,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB40C	HGNC	ENSG00000197562				66	0	0.00	71	4	5.33
RAD51AP2	0	genome.wustl.edu	37	2	17699667	17699667	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	17699667	17699667	G	A	SNP	RAD51AP2	ENST00000399080	human	ensembl	74_37	-1	known	missense	c.16	p.P6S	0.000	NULL	NULL	-	no_errors	RAD51AP2	HGNC	ENSG00000214842				73	0	0.00	69	4	5.48
RAD52	0	genome.wustl.edu	37	12	1025712	1025712	+	RNA	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	12	1025712	1025712	A	G	SNP	RAD52	ENST00000535376	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RAD52	HGNC	ENSG00000002016	tier1	-	-	84	0	0.00	64	4	5.88
RADIL	0	genome.wustl.edu	37	7	4917593	4917593	+	Missense_Mutation	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	7	4917593	4917593	A	G	SNP	RADIL	ENST00000399583	human	ensembl	74_37	-1	known	missense	c.178	p.S60P	0.919	NULL	pfam_Dil_domain,pfam_Ras-assoc,pfam_PDZ,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	-	no_errors	RADIL	HGNC	ENSG00000157927	tier1	-	-	41	0	0.00	30	38	55.88
RADIL	0	genome.wustl.edu	37	7	4841406	4841406	+	Missense_Mutation	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	7	4841406	4841406	C	A	SNP	RADIL	ENST00000399583	human	ensembl	74_37	-1	known	missense	c.2720	p.S907I	1.000	NULL	pfam_Dil_domain,pfam_Ras-assoc,pfam_PDZ,superfamily_PDZ,superfamily_SMAD_FHA_domain,smart_Ras-assoc,smart_PDZ,pfscan_Dilute,pfscan_PDZ,pfscan_Ras-assoc	-	no_errors	RADIL	HGNC	ENSG00000157927				11	0	0.00	42	3	6.52
RANBP17	0	genome.wustl.edu	37	5	170345828	170345828	+	Missense_Mutation	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	5	170345828	170345828	A	G	SNP	RANBP17	ENST00000523189	human	ensembl	74_37	+1	known	missense	c.1066	p.R356G	1.000	superfamily_ARM-type_fold	pfam_Importin-beta_N,superfamily_ARM-type_fold,smart_Importin-beta_N	-	no_errors	RANBP17	HGNC	ENSG00000204764	tier1	-	-	56	0	0.00	50	4	7.41
RAP1A	0	genome.wustl.edu	37	1	112233987	112233987	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	112233987	112233987	G	A	SNP	RAP1A	ENST00000356415	human	ensembl	74_37	+1	known	missense	c.5	p.R2H	1.000	pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAP1A	HGNC	ENSG00000116473	tier1	-	-	72	0	0.00	24	18	42.86
RAPGEF4	0	genome.wustl.edu	37	2	173885435	173885435	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	173885435	173885435	G	A	SNP	RAPGEF4	ENST00000397081	human	ensembl	74_37	+1	known	missense	c.2245	p.D749N	1.000	superfamily_Ras_GEF_dom	pfam_RasGRF_CDC25,pfam_cNMP-bd_dom,pfam_DEP_dom,pfam_Ras-like_Gua-exchang_fac_N,pfam_Ras-assoc,superfamily_Ras_GEF_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,smart_DEP_dom,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_cNMP-bd_dom,pfscan_DEP_dom,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N,prints_cAMP/cGMP_kin	-	no_errors	RAPGEF4	HGNC	ENSG00000091428	tier1	-	-	43	0	0.00	31	21	40.38
RARRES3	0	genome.wustl.edu	37	11	63313709	63313709	+	Frame_Shift_Del	DEL	A	A	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	11	63313709	63313709	A	-	DEL	RARRES3	ENST00000255688	human	ensembl	74_37	+1	known	frame_shift_del	c.476	p.A162fs	0.001	NULL	pfam_LRAT-like_dom	-	no_errors	RARRES3	HGNC	ENSG00000133321	tier1			46	0	0.00	44	4	8.33
RASSF5	0	genome.wustl.edu	37	1	206762282	206762283	+	RNA	INS	-	-	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	206762282	206762283	-	A	INS	RASSF5	ENST00000481486	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.620:0.673	-	-	-	no_errors	RASSF5	HGNC	ENSG00000136653	tier1			44	0	0.00	28	2	6.67
RBM20	0	genome.wustl.edu	37	10	112572521	112572521	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	10	112572521	112572521	G	T	SNP	RBM20	ENST00000369519	human	ensembl	74_37	+1	known	missense	c.2366	p.R789M	1.000	NULL	smart_Znf_U1,smart_RRM_dom,pfscan_Znf_C2H2_matrin,pfscan_RRM_dom	-	no_errors	RBM20	HGNC	ENSG00000203867	tier1	-	-	57	0	0.00	60	4	6.15
RFNG	0	genome.wustl.edu	37	17	80007652	80007652	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	80007652	80007652	G	A	SNP	RFNG	ENST00000310496	human	ensembl	74_37	-1	known	silent	c.729	p.I243	1.000	pfam_Fringe-like,pirsf_Fringe	pfam_Fringe-like,pirsf_Fringe	-	no_errors	RFNG	HGNC	ENSG00000169733				20	0	0.00	30	2	6.25
RFXAP	0	genome.wustl.edu	37	13	37393677	37393678	+	Frame_Shift_Ins	INS	-	-	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	13	37393677	37393678	-	G	INS	RFXAP	ENST00000255476	human	ensembl	74_37	+1	known	frame_shift_ins	c.183_184	p.S63fs	0.000:0.010	NULL	NULL	-	no_errors	RFXAP	HGNC	ENSG00000133111	tier1			40	0	0.00	23	7	23.33
RNF170	0	genome.wustl.edu	37	8	42720613	42720613	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	8	42720613	42720613	G	A	SNP	RNF170	ENST00000527424	human	ensembl	74_37	-1	known	silent	c.342	p.Y114	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_DUF1232,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	RNF170	HGNC	ENSG00000120925				19	0	0.00	14	2	12.50
RORB	0	genome.wustl.edu	37	9	77257546	77257546	+	Missense_Mutation	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	9	77257546	77257546	A	G	SNP	RORB	ENST00000396204	human	ensembl	74_37	+1	known	missense	c.485	p.K162R	1.000	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_ROR_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,prints_ThyrH_rcpt,pfscan_Znf_hrmn_rcpt	-	no_errors	RORB	HGNC	ENSG00000198963	tier1	-	-	49	0	0.00	2	26	92.86
RPS6KA5	0	genome.wustl.edu	37	14	91386650	91386650	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	14	91386650	91386650	C	T	SNP	RPS6KA5	ENST00000261991	human	ensembl	74_37	-1	known	missense	c.706	p.V236I	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_LipoPS_kinase,pfam_Aminoglycoside_PTrfase,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_AGC-kinase_C,smart_Tyr_kinase_cat_dom,pirsf_Ribosomal_S6_kinase_II,pfscan_Prot_kinase_dom	-	no_errors	RPS6KA5	HGNC	ENSG00000100784				30	0	0.00	32	2	5.88
RPS8	0	genome.wustl.edu	37	1	45242355	45242355	+	Silent	SNP	C	C	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	45242355	45242355	C	G	SNP	RPS8	ENST00000396651	human	ensembl	74_37	+1	known	silent	c.120	p.P40	0.995	pfam_Ribosomal_S8e/biogenesis_NSA2,tigrfam_Ribosomal_S8e	pfam_Ribosomal_S8e/biogenesis_NSA2,tigrfam_Ribosomal_S8e	-	no_errors	RPS8	HGNC	ENSG00000142937				65	0	0.00	56	4	6.67
RS1	0	genome.wustl.edu	37	X	18662688	18662690	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	X	18662688	18662690	CTT	-	DEL	RS1	ENST00000379984	human	ensembl	74_37	-1	known	in_frame_del	c.384_382	p.K128in_frame_del	1.000:1.000:1.000	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,smart_Coagulation_fac_5/8-C_type_dom,pfscan_Coagulation_fac_5/8-C_type_dom	-	no_errors	RS1	HGNC	ENSG00000102104	tier1			23	0	0.00	19	19	50.00
RSRC2	0	genome.wustl.edu	37	12	122992874	122992874	+	Missense_Mutation	SNP	T	T	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	12	122992874	122992874	T	A	SNP	RSRC2	ENST00000331738	human	ensembl	74_37	-1	known	missense	c.926	p.E309V	1.000	NULL	NULL	-	no_errors	RSRC2	HGNC	ENSG00000111011	tier1	-	-	38	0	0.00	43	4	8.51
RXFP3	0	genome.wustl.edu	37	5	33937727	33937727	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	5	33937727	33937727	C	T	SNP	RXFP3	ENST00000330120	human	ensembl	74_37	+1	known	silent	c.882	p.I294	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_Formyl_pep_rcpt	-	no_errors	RXFP3	HGNC	ENSG00000182631	tier1	-	-	21	0	0.00	0	25	100.00
RYR3	0	genome.wustl.edu	37	15	33952417	33952417	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	15	33952417	33952417	C	T	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	missense	c.4415	p.A1472V	0.997	NULL	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	46	0	0.00	15	22	59.46
S1PR1	0	genome.wustl.edu	37	1	101704505	101704505	+	RNA	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	101704505	101704505	G	A	SNP	S1PR1	ENST00000475289	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	S1PR1	HGNC	ENSG00000170989	tier1	-	-	18	0	0.00	3	3	50.00
SCN11A	0	genome.wustl.edu	37	3	38888452	38888452	+	Missense_Mutation	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	38888452	38888452	C	A	SNP	SCN11A	ENST00000302328	human	ensembl	74_37	-1	known	missense	c.5109	p.M1703I	0.584	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN11A	HGNC	ENSG00000168356	tier1	-	-	47	0	0.00	24	13	35.14
SCN7A	0	genome.wustl.edu	37	2	167334126	167334126	+	Missense_Mutation	SNP	T	T	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	167334126	167334126	T	A	SNP	SCN7A	ENST00000409855	human	ensembl	74_37	-1	known	missense	c.81	p.K27N	0.103	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN7A	HGNC	ENSG00000136546				43	0	0.00	35	2	5.41
SCRT2	0	genome.wustl.edu	37	20	656119	656119	+	Frame_Shift_Del	DEL	C	C	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	20	656119	656119	C	-	DEL	SCRT2	ENST00000246104	human	ensembl	74_37	-1	known	frame_shift_del	c.127	p.D43fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SCRT2	HGNC	ENSG00000215397	tier1			17	0	0.00	19	2	9.52
SEC24B	0	genome.wustl.edu	37	4	110448579	110448579	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	110448579	110448579	G	A	SNP	SEC24B	ENST00000265175	human	ensembl	74_37	+1	known	missense	c.3067	p.A1023T	1.000	pfam_Sec23/24_helical_dom,superfamily_Sec23/24_helical_dom	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24B	HGNC	ENSG00000138802	tier1	-	-	48	0	0.00	53	4	7.02
SEMA4D	0	genome.wustl.edu	37	9	91991861	91991861	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	9	91991861	91991861	G	A	SNP	SEMA4D	ENST00000343780	human	ensembl	74_37	-1	known	missense	c.1769	p.S590L	0.000	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA4D	HGNC	ENSG00000187764	tier1	-	-	65	0	0.00	6	56	90.32
SGK1	0	genome.wustl.edu	37	6	134493863	134493863	+	Missense_Mutation	SNP	C	C	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	134493863	134493863	C	G	SNP	SGK1	ENST00000367858	human	ensembl	74_37	-1	known	missense	c.884	p.R295P	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_Phox,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	SGK1	HGNC	ENSG00000118515	tier1	-	-	37	0	0.00	16	22	57.89
SHANK3	0	genome.wustl.edu	37	22	51135698	51135698	+	Frame_Shift_Del	DEL	G	G	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	22	51135698	51135698	G	-	DEL	SHANK3	ENST00000262795	human	ensembl	74_37	+1	known	frame_shift_del	c.1332	p.A447fs	0.002	NULL	pfam_SAM_type1,pfam_Ankyrin_rpt,pfam_SAM_2,pfam_SH3_2,pfam_PDZ,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SAM/pointed,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK3	HGNC	ENSG00000251322	tier1			20	0	0.00	12	4	25.00
SLC25A26	0	genome.wustl.edu	37	3	66313792	66313792	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	66313792	66313792	G	T	SNP	SLC25A26	ENST00000354883	human	ensembl	74_37	+1	known	missense	c.442	p.V148F	1.000	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	pfam_Mitochondrial_sb/sol_carrier,superfamily_Mt_carrier_dom,pfscan_Mitochondrial_sb/sol_carrier	-	no_errors	SLC25A26	HGNC	ENSG00000144741	tier1	-	-	49	0	0.00	54	4	6.90
SLC2A9	0	genome.wustl.edu	37	4	10027509	10027510	+	RNA	INS	-	-	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	10027509	10027510	-	A	INS	SLC2A9	ENST00000509214	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	SLC2A9	HGNC	ENSG00000109667	tier1			30	0	0.00	32	5	13.51
SLC39A10	0	genome.wustl.edu	37	2	196573445	196573445	+	Missense_Mutation	SNP	A	A	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	196573445	196573445	A	C	SNP	SLC39A10	ENST00000359634	human	ensembl	74_37	+1	known	missense	c.1452	p.E484D	0.003	pfam_ZIP	pfam_ZIP	-	no_errors	SLC39A10	HGNC	ENSG00000196950	tier1	-	-	42	0	0.00	6	41	87.23
SLC4A4	0	genome.wustl.edu	37	4	72222742	72222742	+	Missense_Mutation	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	72222742	72222742	C	A	SNP	SLC4A4	ENST00000425175	human	ensembl	74_37	+1	known	missense	c.568	p.Q190K	1.000	pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A4	HGNC	ENSG00000080493				52	0	0.00	38	2	5.00
SLC8A2	0	genome.wustl.edu	37	19	47969480	47969480	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	47969480	47969480	C	T	SNP	SLC8A2	ENST00000236877	human	ensembl	74_37	-1	known	missense	c.181	p.D61N	0.843	tigrfam_Na_Ca_Ex	pfam_Calx_beta,pfam_NaCa_Exmemb,smart_Calx_beta,prints_Na_Ca_Ex,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A2	HGNC	ENSG00000118160	tier1	-	-	22	0	0.00	3	12	80.00
SLFN12	0	genome.wustl.edu	37	17	33749083	33749083	+	Nonsense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	33749083	33749083	C	T	SNP	SLFN12	ENST00000304905	human	ensembl	74_37	-1	known	nonsense	c.965	p.W322*	0.046	pfam_ATPase_AAA-4	pfam_ATPase_AAA-4	-	no_errors	SLFN12	HGNC	ENSG00000172123	tier1	-	-	45	0	0.00	22	46	67.65
SMAD4	0	genome.wustl.edu	37	18	48591854	48591854	+	Missense_Mutation	SNP	T	T	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	18	48591854	48591854	T	A	SNP	SMAD4	ENST00000342988	human	ensembl	74_37	+1	known	missense	c.1017	p.F339L	1.000	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD4	HGNC	ENSG00000141646	tier1	-	-	68	0	0.00	5	20	80.00
SMAD4	0	genome.wustl.edu	37	18	48604654	48604656	+	In_Frame_Del	DEL	TGA	TGA	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	TGA	TGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	18	48604654	48604656	TGA	-	DEL	SMAD4	ENST00000342988	human	ensembl	74_37	+1	known	in_frame_del	c.1476_1478	p.D494in_frame_del	0.988:1.000:1.000	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD4	HGNC	ENSG00000141646	tier1			58	0	0.00	6	17	73.91
SNRNP200	0	genome.wustl.edu	37	2	96947598	96947598	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	96947598	96947598	G	A	SNP	SNRNP200	ENST00000323853	human	ensembl	74_37	-1	known	silent	c.4978	p.L1660	1.000	pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_C,pfscan_Helicase_C	pfam_Sec63-dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Sec63-dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SNRNP200	HGNC	ENSG00000144028	tier1	-	-	43	0	0.00	41	14	25.45
SNX11	0	genome.wustl.edu	37	17	46190696	46190696	+	Missense_Mutation	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	46190696	46190696	T	C	SNP	SNX11	ENST00000359238	human	ensembl	74_37	+1	known	missense	c.163	p.C55R	1.000	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	pfam_Phox,superfamily_Phox,smart_Phox,pfscan_Phox	-	no_errors	SNX11	HGNC	ENSG00000002919	tier1	-	-	46	0	0.00	74	5	6.33
SOBP	0	genome.wustl.edu	37	6	107955278	107955278	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	107955278	107955278	C	T	SNP	SOBP	ENST00000317357	human	ensembl	74_37	+1	known	silent	c.1230	p.P410	1.000	NULL	NULL	-	no_errors	SOBP	HGNC	ENSG00000112320	tier1	-	-	40	0	0.00	12	12	50.00
SOX17	0	genome.wustl.edu	37	8	55372161	55372161	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	8	55372161	55372161	C	T	SNP	SOX17	ENST00000297316	human	ensembl	74_37	+1	known	missense	c.851	p.P284L	0.971	pfam_Sox_C_TAD	pfam_Sox_C_TAD,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX17	HGNC	ENSG00000164736	tier1	rs200451706	-	12	0	0.00	11	12	52.17
SPATA31E1	0	genome.wustl.edu	37	9	90503384	90503384	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	9	90503384	90503384	G	T	SNP	SPATA31E1	ENST00000325643	human	ensembl	74_37	+1	known	missense	c.3982	p.V1328L	0.000	NULL	NULL	-	no_errors	SPATA31E1	HGNC	ENSG00000177992	tier1	-	-	34	0	0.00	25	4	13.79
SPEF2	0	genome.wustl.edu	37	5	35646850	35646850	+	Missense_Mutation	SNP	A	A	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	5	35646850	35646850	A	C	SNP	SPEF2	ENST00000356031	human	ensembl	74_37	+1	known	missense	c.667	p.N223H	0.828	NULL	pfam_DUF1042,pfam_Adenylate_kin,pfam_HATC_dom_C,superfamily_P-loop_NTPase,superfamily_CH-domain,pfscan_CH-domain	-	no_errors	SPEF2	HGNC	ENSG00000152582	tier1	-	-	35	0	0.00	4	6	60.00
SPO11	0	genome.wustl.edu	37	20	55908291	55908291	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	20	55908291	55908291	G	T	SNP	SPO11	ENST00000371263	human	ensembl	74_37	+1	known	missense	c.293	p.R98I	0.996	prints_Meiotic_Spo11	pfam_Meiosis_Spo11,pfam_Spo11/TopoVI_A_N,superfamily_Spo11/TopoVI_A,prints_Meiotic_Spo11,prints_Spo11/TopoVI_A,prints_TopoVI_A	-	no_errors	SPO11	HGNC	ENSG00000054796	tier1	-	-	66	0	0.00	68	4	5.56
SSFA2	0	genome.wustl.edu	37	2	182780039	182780039	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	2	182780039	182780039	G	A	SNP	SSFA2	ENST00000431877	human	ensembl	74_37	+1	known	missense	c.1672	p.A558T	0.353	NULL	NULL	-	no_errors	SSFA2	HGNC	ENSG00000138434	tier1	-	-	44	0	0.00	33	4	10.81
SSPO	0	genome.wustl.edu	37	7	149516919	149516920	+	RNA	INS	-	-	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	7	149516919	149516920	-	C	INS	SSPO	ENST00000378016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.464:0.462	-	-	-	no_errors	SSPO	HGNC	ENSG00000197558	tier1			67	0	0.00	72	58	44.62
STAT5B	0	genome.wustl.edu	37	17	40354821	40354821	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	17	40354821	40354821	C	T	SNP	STAT5B	ENST00000293328	human	ensembl	74_37	-1	known	missense	c.2083	p.A695T	1.000	smart_SH2	pfam_STAT_TF_DNA-bd,pfam_STAT_TF_alpha,pfam_STAT_TF_prot_interaction,pfam_SH2,superfamily_p53-like_TF_DNA-bd,superfamily_STAT_TF_coiled-coil,superfamily_STAT_TF_prot_interaction,smart_STAT_TF_prot_interaction,smart_SH2,pfscan_SH2	-	no_errors	STAT5B	HGNC	ENSG00000173757	tier1	-	-	61	0	0.00	60	54	46.96
SUGP2	0	genome.wustl.edu	37	19	19130025	19130025	+	Silent	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	19130025	19130025	T	C	SNP	SUGP2	ENST00000337018	human	ensembl	74_37	-1	known	silent	c.1743	p.R581	1.000	superfamily_Surp	pfam_Surp,pfam_G_patch_dom,superfamily_Surp,smart_Surp,smart_G_patch_dom,pfscan_Surp,pfscan_G_patch_dom	-	no_errors	SUGP2	HGNC	ENSG00000064607				51	0	0.00	53	3	5.36
SVOPL	0	genome.wustl.edu	37	7	138279224	138279224	+	RNA	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	7	138279224	138279224	C	T	SNP	SVOPL	ENST00000463557	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	SVOPL	HGNC	ENSG00000157703	tier1	-	-	42	0	0.00	24	23	48.94
TADA1	0	genome.wustl.edu	37	1	166826666	166826666	+	RNA	SNP	A	A	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	166826666	166826666	A	C	SNP	TADA1	ENST00000467021	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.818	-	-	-	no_errors	TADA1	HGNC	ENSG00000152382	tier1	-	-	18	0	0.00	6	14	70.00
TADA2B	0	genome.wustl.edu	37	4	7055827	7055827	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	7055827	7055827	C	T	SNP	TADA2B	ENST00000310074	human	ensembl	74_37	+1	known	silent	c.309	p.P103	0.447	pfam_SANT/Myb,superfamily_Homeodomain-like,smart_SANT/Myb,pirsf_Transcriptional_adaptor_2,pfscan_Myb-like_dom	pfam_SANT/Myb,pfam_Znf_ZZ,superfamily_Homeodomain-like,smart_Znf_ZZ,smart_SANT/Myb,pirsf_Transcriptional_adaptor_2,pfscan_Znf_ZZ,pfscan_Myb-like_dom	-	no_errors	TADA2B	HGNC	ENSG00000173011	tier1	-	-	64	0	0.00	22	21	48.84
TARDBP	0	genome.wustl.edu	37	1	11084334	11084334	+	RNA	DEL	T	T	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	11084334	11084334	T	-	DEL	TARDBP	ENST00000480464	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.289	-	-	-	no_errors	TARDBP	HGNC	ENSG00000120948	tier1			16	0	0.00	7	7	50.00
TARSL2	0	genome.wustl.edu	37	15	102263299	102263299	+	Missense_Mutation	SNP	G	G	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	15	102263299	102263299	G	C	SNP	TARSL2	ENST00000335968	human	ensembl	74_37	-1	known	missense	c.366	p.S122R	0.004	NULL	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,pfam_TGS,pfam_tRNA_SAD,superfamily_Thr/Ala-tRNA-synth_IIc_edit,superfamily_Anticodon-bd,superfamily_TGS-like,smart_tRNA_SAD,pfscan_aa-tRNA-synth_II,prints_Thr-tRNA-ligase_IIa,tigrfam_Thr-tRNA-ligase_IIa	-	no_errors	TARSL2	HGNC	ENSG00000185418	tier1	-	-	61	0	0.00	73	4	5.19
TAS2R3	0	genome.wustl.edu	37	7	141464471	141464471	+	Missense_Mutation	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	7	141464471	141464471	C	A	SNP	TAS2R3	ENST00000247879	human	ensembl	74_37	+1	known	missense	c.513	p.F171L	0.003	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R3	HGNC	ENSG00000127362	tier1	-	-	47	0	0.00	53	18	25.35
TBL1X	0	genome.wustl.edu	37	X	9622336	9622336	+	Missense_Mutation	SNP	T	T	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	X	9622336	9622336	T	C	SNP	TBL1X	ENST00000217964	human	ensembl	74_37	+1	known	missense	c.185	p.L62P	0.997	pfam_LisH_dimerisation_subgr,smart_LisH_dimerisation,pfscan_LisH_dimerisation	pfam_WD40_repeat,pfam_LisH_dimerisation_subgr,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TBL1X	HGNC	ENSG00000101849				47	0	0.00	61	4	6.15
TLL1	0	genome.wustl.edu	37	4	166915537	166915537	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	166915537	166915537	G	T	SNP	TLL1	ENST00000061240	human	ensembl	74_37	+1	known	missense	c.366	p.L122F	0.997	pirsf_BMP_1/tolloid-like	pfam_CUB_dom,pfam_Peptidase_M12A,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,smart_Peptidase_Metallo,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_BMP_1/tolloid-like,pfscan_CUB_dom,pfscan_EG-like_dom,prints_Peptidase_M12A	-	no_errors	TLL1	HGNC	ENSG00000038295	tier1	-	-	66	0	0.00	29	10	25.64
TMC3	0	genome.wustl.edu	37	15	81638719	81638719	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	15	81638719	81638719	C	T	SNP	TMC3	ENST00000359440	human	ensembl	74_37	-1	known	missense	c.1259	p.S420N	1.000	NULL	pfam_TMC	-	no_errors	TMC3	HGNC	ENSG00000188869	tier1	-	-	34	0	0.00	68	4	5.56
TMEM144	0	genome.wustl.edu	37	4	159133982	159133983	+	Frame_Shift_Ins	INS	-	-	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	159133982	159133983	-	T	INS	TMEM144	ENST00000509278	human	ensembl	74_37	+1	putative	frame_shift_ins	c.163_164	p.W57fs	0.000:0.000	NULL	pfam_DUF1632_TMEM144	-	no_errors	TMEM144	HGNC	ENSG00000164124	tier1			40	0	0.00	37	2	5.13
TMEM63B	0	genome.wustl.edu	37	6	44108077	44108077	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	44108077	44108077	C	T	SNP	TMEM63B	ENST00000259746	human	ensembl	74_37	+1	known	missense	c.691	p.R231C	1.000	NULL	pfam_DUF221	-	no_errors	TMEM63B	HGNC	ENSG00000137216				41	0	0.00	45	3	6.25
TMPRSS13	0	genome.wustl.edu	37	11	117779198	117779198	+	Missense_Mutation	SNP	G	G	C			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	11	117779198	117779198	G	C	SNP	TMPRSS13	ENST00000526090	human	ensembl	74_37	-1	known	missense	c.1411	p.L471V	0.000	smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,pfam_Hepsin-SRCR,superfamily_Trypsin-like_Pept_dom,superfamily_Srcr_rcpt-rel,superfamily_LDrepeatLR_classA_rpt,smart_Srcr_rcpt-rel,smart_Peptidase_S1,pfscan_SRCR,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	TMPRSS13	HGNC	ENSG00000137747	tier1	-	-	46	0	0.00	3	29	90.62
TNFAIP8L3	0	genome.wustl.edu	37	15	51350297	51350297	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	15	51350297	51350297	G	A	SNP	TNFAIP8L3	ENST00000327536	human	ensembl	74_37	-1	known	silent	c.660	p.N220	0.251	pfam_DUF758	pfam_DUF758	-	no_errors	TNFAIP8L3	HGNC	ENSG00000183578	tier1	-	-	22	0	0.00	16	24	60.00
TNFRSF11B	0	genome.wustl.edu	37	8	119945384	119945384	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	8	119945384	119945384	G	A	SNP	TNFRSF11B	ENST00000297350	human	ensembl	74_37	-1	known	silent	c.186	p.C62	0.001	pirsf_TNFR_11B,pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg	pirsf_TNFR_11B,pfam_TNFR/NGFR_Cys_rich_reg,pfam_Death_domain,superfamily_DEATH-like_dom,smart_TNFR/NGFR_Cys_rich_reg,smart_Death_domain,prints_TNFR_11B,prints_TNFR_11,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	TNFRSF11B	HGNC	ENSG00000164761				53	0	0.00	41	3	6.82
TRANK1	0	genome.wustl.edu	37	3	36874533	36874533	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	36874533	36874533	G	A	SNP	TRANK1	ENST00000429976	human	ensembl	74_37	-1	known	missense	c.6409	p.R2137W	0.013	NULL	pfam_UvrD-like_ATP-bd,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,smart_TPR_repeat,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_TPR-contain_dom	-	no_errors	TRANK1	HGNC	ENSG00000168016	tier1	-	-	48	0	0.00	47	4	7.84
TRIM42	0	genome.wustl.edu	37	3	140407024	140407024	+	Silent	SNP	A	A	G			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	140407024	140407024	A	G	SNP	TRIM42	ENST00000286349	human	ensembl	74_37	+1	known	silent	c.1500	p.S500	0.233	NULL	pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Znf_B-box,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM42	HGNC	ENSG00000155890	tier1	-	-	34	0	0.00	19	10	34.48
TRMT13	0	genome.wustl.edu	37	1	100606480	100606480	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	100606480	100606480	G	A	SNP	TRMT13	ENST00000370141	human	ensembl	74_37	+1	known	missense	c.574	p.G192R	1.000	pfam_Methyltransferase_TRM13	pfam_Methyltransferase_TRM13,pfam_Znf_CCCH-type_TRM13,pfam_TRM13/UPF0224_CHHC_Znf_dom	-	no_errors	TRMT13	HGNC	ENSG00000122435	tier1	-	-	39	0	0.00	25	22	46.81
TSTD2	0	genome.wustl.edu	37	9	100367120	100367120	+	Nonsense_Mutation	SNP	T	T	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	9	100367120	100367120	T	A	SNP	TSTD2	ENST00000341170	human	ensembl	74_37	-1	known	nonsense	c.1141	p.K381*	1.000	pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom	pfam_Rhodanese-like_dom,superfamily_Rhodanese-like_dom,smart_Rhodanese-like_dom,pfscan_Rhodanese-like_dom	-	no_errors	TSTD2	HGNC	ENSG00000136925	tier1	-	-	33	0	0.00	27	3	10.00
TTLL11	0	genome.wustl.edu	37	9	124855629	124855629	+	Silent	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	9	124855629	124855629	G	T	SNP	TTLL11	ENST00000321582	human	ensembl	74_37	-1	known	silent	c.69	p.L23	0.000	NULL	pfam_TTL/TTLL_fam	-	no_errors	TTLL11	HGNC	ENSG00000175764				14	0	0.00	12	2	14.29
TXNDC5	0	genome.wustl.edu	37	6	8026623	8026623	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	8026623	8026623	G	T	SNP	TXNDC5	ENST00000539054	human	ensembl	74_37	-1	known	missense	c.24	p.N8K	0.998	NULL	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,tigrfam_Disulphide_isomerase	-	no_errors	TXNDC5	HGNC	ENSG00000239264	tier1	-	-	54	0	0.00	60	4	6.25
U2AF1	0	genome.wustl.edu	37	21	44513332	44513332	+	Silent	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	21	44513332	44513332	C	T	SNP	U2AF1	ENST00000291552	human	ensembl	74_37	-1	known	silent	c.603	p.E201	0.999	NULL	pfam_Znf_CCCH,pfam_RRM_dom,smart_Znf_CCCH,smart_RRM_dom_euk,smart_RRM_dom,pfscan_RRM_dom,prints_U2_small	-	no_errors	U2AF1	HGNC	ENSG00000160201	tier1	-	-	82	0	0.00	5	55	91.67
UNC13A	0	genome.wustl.edu	37	19	17738353	17738353	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	17738353	17738353	G	A	SNP	UNC13A	ENST00000428389	human	ensembl	74_37	-1	known	silent	c.4149	p.N1383	0.996	NULL	pfam_Munc13_subgr_dom-2,pfam_C2_dom,pfam_Ca-dep_secretion_activator,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13A	HGNC	ENSG00000130477				22	0	0.00	18	2	10.00
UNC5C	0	genome.wustl.edu	37	4	96091308	96091308	+	Missense_Mutation	SNP	T	T	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	4	96091308	96091308	T	A	SNP	UNC5C	ENST00000453304	human	ensembl	74_37	-1	known	missense	c.2627	p.D876V	1.000	pfam_Death_domain,superfamily_DEATH-like_dom,smart_Death_domain	pfam_ZU5,pfam_Death_domain,pfam_Ig_I-set,pfam_Thrombospondin_1_rpt,superfamily_DEATH-like_dom,superfamily_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,smart_Thrombospondin_1_rpt,smart_ZU5,smart_Death_domain,pfscan_Thrombospondin_1_rpt,pfscan_ZU5,pfscan_Ig-like_dom	-	no_errors	UNC5C	HGNC	ENSG00000182168	tier1	-	-	65	0	0.00	28	20	40.82
UPK1A-AS1	0	genome.wustl.edu	37	19	36159273	36159273	+	RNA	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	36159273	36159273	G	A	SNP	UPK1A-AS1	ENST00000443196	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	UPK1A-AS1	HGNC	ENSG00000226510	tier1	-	-	43	0	0.00	22	13	37.14
VILL	0	genome.wustl.edu	37	3	38035810	38035810	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	38035810	38035810	G	T	SNP	VILL	ENST00000283713	human	ensembl	74_37	+1	known	missense	c.194	p.G65V	0.995	pfam_Gelsolin_dom,smart_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	VILL	HGNC	ENSG00000136059				32	0	0.00	45	4	8.16
YTHDF2	0	genome.wustl.edu	37	1	29069108	29069108	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	29069108	29069108	G	A	SNP	YTHDF2	ENST00000373812	human	ensembl	74_37	+1	known	missense	c.326	p.G109E	1.000	NULL	pfam_YTH_domain,pfscan_YTH_domain	-	no_errors	YTHDF2	HGNC	ENSG00000198492	tier1	-	-	65	0	0.00	49	4	7.55
ZBP1	0	genome.wustl.edu	37	20	56179776	56179776	+	Silent	SNP	A	A	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	20	56179776	56179776	A	T	SNP	ZBP1	ENST00000371173	human	ensembl	74_37	-1	known	silent	c.1143	p.I381	0.000	NULL	pfam_dsRNA_A_deaminase,smart_dsRNA_A_deaminase	-	no_errors	ZBP1	HGNC	ENSG00000124256				54	0	0.00	70	4	5.41
ZBTB22	0	genome.wustl.edu	37	6	33284640	33284640	+	Silent	SNP	C	C	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	33284640	33284640	C	A	SNP	ZBTB22	ENST00000418724	human	ensembl	74_37	-1	known	silent	c.54	p.S18	0.138	NULL	pfam_BTB_POZ,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB22	HGNC	ENSG00000236104	tier1	-	-	26	0	0.00	28	5	15.15
ZC3H13	0	genome.wustl.edu	37	13	46562991	46562991	+	Nonsense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	13	46562991	46562991	G	A	SNP	ZC3H13	ENST00000242848	human	ensembl	74_37	-1	known	nonsense	c.1186	p.R396*	0.994	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H13	HGNC	ENSG00000123200	tier1	-	-	60	0	0.00	41	13	23.64
ZFHX2	0	genome.wustl.edu	37	14	23993643	23993643	+	Silent	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	14	23993643	23993643	G	A	SNP	ZFHX2	ENST00000419474	human	ensembl	74_37	-1	known	silent	c.5508	p.D1836	0.189	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX2	HGNC	ENSG00000136367	tier1	-	-	26	0	0.00	12	19	61.29
ZIC4	0	genome.wustl.edu	37	3	147105323	147105323	+	RNA	DEL	T	T	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	3	147105323	147105323	T	-	DEL	ZIC4	ENST00000472749	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	ZIC4	HGNC	ENSG00000174963	tier1			35	0	0.00	20	9	31.03
ZKSCAN3	0	genome.wustl.edu	37	6	28334042	28334042	+	Frame_Shift_Del	DEL	A	A	-			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	6	28334042	28334042	A	-	DEL	ZKSCAN3	ENST00000252211	human	ensembl	74_37	+1	known	frame_shift_del	c.1597	p.N534fs	0.206	pfscan_Znf_C2H2	pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZKSCAN3	HGNC	ENSG00000189298	tier1			30	0	0.00	26	2	7.14
ZMYM6	0	genome.wustl.edu	37	1	35484911	35484912	+	Frame_Shift_Ins	INS	-	-	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	1	35484911	35484912	-	A	INS	ZMYM6	ENST00000317538	human	ensembl	74_37	-1	novel	frame_shift_ins	c.471_470	p.L157fs	0.005:0.001	NULL	pfam_Znf_MYM,smart_TRASH_dom	-	no_errors	ZMYM6	HGNC	ENSG00000163867	tier1			53	0	0.00	34	4	10.53
ZNF423	0	genome.wustl.edu	37	16	49670811	49670811	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	49670811	49670811	C	T	SNP	ZNF423	ENST00000262383	human	ensembl	74_37	-1	known	missense	c.2252	p.R751H	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF423	HGNC	ENSG00000102935	tier1	rs143285873	-	23	0	0.00	7	7	50.00
ZNF462	0	genome.wustl.edu	37	9	109691105	109691105	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	9	109691105	109691105	G	A	SNP	ZNF462	ENST00000457913	human	ensembl	74_37	+1	known	missense	c.4912	p.E1638K	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF462	HGNC	ENSG00000148143	tier1	-	-	28	0	0.00	19	5	20.83
ZNF567	0	genome.wustl.edu	37	19	37211466	37211466	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	37211466	37211466	G	A	SNP	ZNF567	ENST00000536254	human	ensembl	74_37	+1	known	missense	c.1840	p.E614K	0.996	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF567	HGNC	ENSG00000189042	tier1	-	-	46	0	0.00	2	43	95.56
ZNF628	0	genome.wustl.edu	37	19	55992629	55992629	+	Missense_Mutation	SNP	G	G	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	55992629	55992629	G	T	SNP	ZNF628	ENST00000598519	human	ensembl	74_37	+1	known	missense	c.69	p.E23D	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF628	HGNC	ENSG00000197483	tier1	-	-	55	0	0.00	14	25	64.10
ZNF850	0	genome.wustl.edu	37	19	37241190	37241190	+	Missense_Mutation	SNP	C	C	T			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	19	37241190	37241190	C	T	SNP	ZNF850	ENST00000591344	human	ensembl	74_37	-1	known	missense	c.752	p.R251K	0.319	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF850	HGNC	ENSG00000267041	tier1	-	-	71	0	0.00	23	23	50.00
ZSCAN10	0	genome.wustl.edu	37	16	3139484	3139484	+	Missense_Mutation	SNP	G	G	A			TCGA-R6-A8WC-01A-11D-A37C-09	TCGA-R6-A8WC-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	587f25b3-3dcd-4457-8960-99e298297900	2e955c1a-8b26-46fc-a05e-f2d7ac8eca8c	16	3139484	3139484	G	A	SNP	ZSCAN10	ENST00000252463	human	ensembl	74_37	-1	known	missense	c.1786	p.R596C	0.966	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN10	HGNC	ENSG00000130182	tier1	-	-	33	0	0.00	10	11	52.38
