Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCC5	0	genome.wustl.edu	37	3	183665251	183665251	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	3	183665251	183665251	G	A	SNP	ABCC5	ENST00000334444	human	ensembl	74_37	-1	known	missense	c.3275	p.T1092M	1.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC5	HGNC	ENSG00000114770				21	0	0.00	14	3	17.65
ABHD17A	0	genome.wustl.edu	37	19	1877558	1877558	+	Missense_Mutation	SNP	C	C	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	1877558	1877558	C	G	SNP	ABHD17A	ENST00000250974	human	ensembl	74_37	-1	known	missense	c.809	p.R270P	1.000	pfam_Dienelactn_hydro	pfam_Dienelactn_hydro	-	no_errors	ABHD17A	HGNC	ENSG00000129968				64	0	0.00	65	4	5.80
ABHD8	0	genome.wustl.edu	37	19	17412293	17412293	+	Frame_Shift_Del	DEL	G	G	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	17412293	17412293	G	-	DEL	ABHD8	ENST00000247706	human	ensembl	74_37	-1	known	frame_shift_del	c.133	p.R45fs	1.000	NULL	pfam_AB_hydrolase_1,prints_AB_hydrolase_1,prints_Epox_hydrolase-like	-	no_errors	ABHD8	HGNC	ENSG00000127220	tier1			28	0	0.00	14	2	12.50
ACSS1	0	genome.wustl.edu	37	20	25011577	25011577	+	Missense_Mutation	SNP	G	G	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	20	25011577	25011577	G	C	SNP	ACSS1	ENST00000323482	human	ensembl	74_37	-1	known	missense	c.449	p.T150R	1.000	pfam_AMP-dep_Synth/Lig,tigrfam_Ac_CoA_lig	pfam_AMP-dep_Synth/Lig,tigrfam_Ac_CoA_lig	-	no_errors	ACSS1	HGNC	ENSG00000154930	tier1	-	-	25	0	0.00	23	6	20.69
ADAM19	0	genome.wustl.edu	37	5	156957869	156957869	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	156957869	156957869	G	A	SNP	ADAM19	ENST00000394020	human	ensembl	74_37	-1	known	missense	c.359	p.T120M	0.378	pfam_Peptidase_M12B_N	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM19	HGNC	ENSG00000135074	tier1	-	-	39	0	0.00	22	8	26.67
AGMAT	0	genome.wustl.edu	37	1	15909825	15909826	+	Frame_Shift_Ins	INS	-	-	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	15909825	15909826	-	C	INS	AGMAT	ENST00000375826	human	ensembl	74_37	-1	known	frame_shift_ins	c.338_337	p.A113fs	0.991:0.994	pfam_Ureohydrolase,tigrfam_Agmatinase-rel	pfam_Ureohydrolase,prints_Ureohydrolase,tigrfam_Agmatinase-rel	-	no_errors	AGMAT	HGNC	ENSG00000116771	tier1			28	0	0.00	33	2	5.71
AGMO	0	genome.wustl.edu	37	7	15599775	15599775	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	7	15599775	15599775	C	T	SNP	AGMO	ENST00000342526	human	ensembl	74_37	-1	known	missense	c.248	p.R83Q	0.966	NULL	pfam_Fatty_acid_hydroxylase	-	no_errors	AGMO	HGNC	ENSG00000187546	tier1	-	-	62	0	0.00	65	17	20.73
AGO3	0	genome.wustl.edu	37	1	36439083	36439083	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	36439083	36439083	C	T	SNP	AGO3	ENST00000373191	human	ensembl	74_37	+1	known	missense	c.629	p.A210V	1.000	pfam_DUF1785	pfam_Piwi,pfam_PAZ_dom,pfam_DUF1785,superfamily_RNaseH-like_dom,superfamily_PAZ_dom,smart_PAZ_dom,smart_Piwi,pfscan_PAZ_dom,pfscan_Piwi	-	no_errors	AGO3	HGNC	ENSG00000126070	tier1	-	-	76	0	0.00	50	4	7.41
AKAP4	0	genome.wustl.edu	37	X	49958695	49958695	+	Silent	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	X	49958695	49958695	T	C	SNP	AKAP4	ENST00000358526	human	ensembl	74_37	-1	known	silent	c.669	p.R223	0.297	pfam_RII_binding_1,smart_AKAP_110	pfam_AKAP_110_C,pfam_RII_binding_1,smart_AKAP_110	-	no_errors	AKAP4	HGNC	ENSG00000147081	tier1	-	-	73	0	0.00	55	23	29.11
AKAP8L	0	genome.wustl.edu	37	19	15512282	15512282	+	Silent	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	15512282	15512282	G	T	SNP	AKAP8L	ENST00000397410	human	ensembl	74_37	-1	known	silent	c.495	p.R165	0.541	NULL	pfam_AKAP95	-	no_errors	AKAP8L	HGNC	ENSG00000011243	tier1	-	-	30	0	0.00	25	4	13.79
ALDH1A1	0	genome.wustl.edu	37	9	75524572	75524572	+	Missense_Mutation	SNP	T	T	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	9	75524572	75524572	T	G	SNP	ALDH1A1	ENST00000297785	human	ensembl	74_37	-1	known	missense	c.1304	p.K435T	0.963	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH	pfam_Aldehyde_DH_dom,pfam_Acyl-CoA_reduct_LuxC,superfamily_Ald_DH/histidinol_DH	-	no_errors	ALDH1A1	HGNC	ENSG00000165092	tier1	-	-	36	0	0.00	16	19	54.29
ALDH6A1	0	genome.wustl.edu	37	14	74535675	74535675	+	Missense_Mutation	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	14	74535675	74535675	A	C	SNP	ALDH6A1	ENST00000553458	human	ensembl	74_37	-1	known	missense	c.740	p.F247C	1.000	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,tigrfam_MeMal-semiAld_DH	pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,tigrfam_MeMal-semiAld_DH	-	no_errors	ALDH6A1	HGNC	ENSG00000119711	tier1	-	-	63	0	0.00	52	6	10.34
AMER1	0	genome.wustl.edu	37	X	63410422	63410422	+	Nonsense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	X	63410422	63410422	G	T	SNP	AMER1	ENST00000330258	human	ensembl	74_37	-1	known	nonsense	c.2745	p.Y915*	0.000	NULL	pfam_Uncharacterised_FAM123	-	no_errors	AMER1	HGNC	ENSG00000184675				30	0	0.00	48	4	7.69
AMY2B	0	genome.wustl.edu	37	1	104120136	104120136	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	104120136	104120136	C	A	SNP	AMY2B	ENST00000361355	human	ensembl	74_37	+1	known	missense	c.1126	p.P376T	1.000	superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY2B	HGNC	ENSG00000240038	tier1	-	-	295	0	0.00	317	22	6.49
ANKEF1	0	genome.wustl.edu	37	20	10032330	10032330	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	20	10032330	10032330	G	A	SNP	ANKEF1	ENST00000378380	human	ensembl	74_37	+1	known	missense	c.1663	p.D555N	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EF_hand_dom,prints_Ankyrin_rpt	-	no_errors	ANKEF1	HGNC	ENSG00000132623	tier1	-	-	18	0	0.00	16	8	33.33
ANKRD46	0	genome.wustl.edu	37	8	101534997	101534997	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	101534997	101534997	G	A	SNP	ANKRD46	ENST00000520552	human	ensembl	74_37	-1	known	missense	c.473	p.A158V	1.000	NULL	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	-	no_errors	ANKRD46	HGNC	ENSG00000186106				22	0	0.00	34	4	10.53
APC	0	genome.wustl.edu	37	5	112175496	112175496	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	112175496	112175496	C	T	SNP	APC	ENST00000257430	human	ensembl	74_37	+1	known	missense	c.4205	p.A1402V	1.000	NULL	pfam_APC_basic_dom,pfam_EB1-bd,pfam_APC_Cys-rich_rpt,pfam_Armadillo,pfam_APC_dom,pfam_SAMP,pfam_APC_15aa_rpt,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	APC	HGNC	ENSG00000134982				12	0	0.00	13	2	13.33
ARAP3	0	genome.wustl.edu	37	5	141059875	141059875	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	141059875	141059875	C	T	SNP	ARAP3	ENST00000239440	human	ensembl	74_37	-1	known	missense	c.179	p.R60H	0.997	pfam_SAM_2,pfam_SAM_type1,superfamily_SAM/pointed,smart_SAM,pfscan_SAM	pfam_RhoGAP_dom,pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ras-assoc,pfam_SAM_2,pfam_SAM_type1,superfamily_Rho_GTPase_activation_prot,superfamily_SAM/pointed,smart_SAM,smart_Pleckstrin_homology,smart_ArfGAP,smart_RhoGAP_dom,pfscan_Pleckstrin_homology,pfscan_Ras-assoc,pfscan_SAM,pfscan_ArfGAP,pfscan_RhoGAP_dom,prints_ArfGAP	-	no_errors	ARAP3	HGNC	ENSG00000120318	tier1	-	-	59	0	0.00	44	4	8.33
ATIC	0	genome.wustl.edu	37	2	216184451	216184451	+	Missense_Mutation	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	216184451	216184451	T	C	SNP	ATIC	ENST00000236959	human	ensembl	74_37	+1	known	missense	c.287	p.I96T	1.000	pfam_MGS-like_dom,superfamily_MGS-like_dom,smart_MGS-like_dom,pirsf_AICARFT_IMPCHas,tigrfam_AICARFT_IMPCHas	pfam_AICARFT_IMPCHas,pfam_MGS-like_dom,superfamily_Cytidine_deaminase-like,superfamily_MGS-like_dom,smart_MGS-like_dom,smart_AICARFT_IMPCHas,pirsf_AICARFT_IMPCHas,tigrfam_AICARFT_IMPCHas	-	no_errors	ATIC	HGNC	ENSG00000138363	tier1	-	-	42	0	0.00	16	4	20.00
ATP2B2	0	genome.wustl.edu	37	3	10491048	10491048	+	Silent	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	3	10491048	10491048	G	T	SNP	ATP2B2	ENST00000352432	human	ensembl	74_37	-1	known	silent	c.180	p.L60	1.000	pfam_ATPase_P-typ_cation-transptr_N,smart_ATPase_P-typ_cation-transptr_N	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_ATP_Ca_trans_C,pfam_HAD-like_dom,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B2	HGNC	ENSG00000157087	tier1	-	-	41	0	0.00	52	4	7.14
AUTS2	0	genome.wustl.edu	37	7	69755386	69755386	+	Silent	SNP	A	A	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	7	69755386	69755386	A	G	SNP	AUTS2	ENST00000403018	human	ensembl	74_37	+1	known	silent	c.693	p.A231	0.000	NULL	NULL	-	no_errors	AUTS2	HGNC	ENSG00000158321	tier1	-	-	66	0	0.00	60	11	15.49
BCAS3	0	genome.wustl.edu	37	17	59115362	59115362	+	Silent	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	17	59115362	59115362	C	T	SNP	BCAS3	ENST00000390652	human	ensembl	74_37	+1	known	silent	c.1920	p.D640	1.000	pfam_BCAS3	pfam_BCAS3,pfam_WD40_repeat	-	no_errors	BCAS3	HGNC	ENSG00000141376	tier1	-	-	55	0	0.00	50	9	15.00
BMP15	0	genome.wustl.edu	37	X	50659038	50659038	+	Nonsense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	X	50659038	50659038	C	T	SNP	BMP15	ENST00000252677	human	ensembl	74_37	+1	known	nonsense	c.610	p.R204*	0.009	NULL	pfam_TGF-b_C,smart_TGF-b_C,prints_Inhibin_asu	-	no_errors	BMP15	HGNC	ENSG00000130385	tier1	-	-	22	0	0.00	19	9	32.14
BPIFC	0	genome.wustl.edu	37	22	32833811	32833811	+	Missense_Mutation	SNP	A	A	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	22	32833811	32833811	A	G	SNP	BPIFC	ENST00000300399	human	ensembl	74_37	-1	known	missense	c.683	p.L228P	0.966	superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N	pfam_Lipid-bd_serum_glycop_N,pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	BPIFC	HGNC	ENSG00000184459				29	0	0.00	36	2	5.26
C10orf112	0	genome.wustl.edu	37	10	19678160	19678160	+	Missense_Mutation	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	10	19678160	19678160	T	C	SNP	C10orf112	ENST00000454679	human	ensembl	74_37	+1	known	missense	c.2624	p.L875P	0.777	NULL	pfam_MAM_dom,pfam_LDrepeatLR_classA_rpt,superfamily_ConA-like_lec_gl_sf,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_MAM_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_MAM_dom,prints_LDrepeatLR_classA_rpt,prints_MAM_dom	-	no_errors	C10orf112	HGNC	ENSG00000204740	tier1	-	-	23	0	0.00	32	6	15.79
C14orf132	0	genome.wustl.edu	37	14	96552938	96552938	+	RNA	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	14	96552938	96552938	G	A	SNP	C14orf132	ENST00000553764	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	C14orf132	HGNC	ENSG00000227051	tier1	-	-	21	0	0.00	11	10	47.62
C16orf45	0	genome.wustl.edu	37	16	15680718	15680718	+	RNA	DEL	C	C	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	16	15680718	15680718	C	-	DEL	C16orf45	ENST00000565913	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.023	-	-	-	no_errors	C16orf45	HGNC	ENSG00000166780	tier1			75	0	0.00	61	9	12.86
C2CD2L	0	genome.wustl.edu	37	11	118984980	118984980	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	11	118984980	118984980	G	A	SNP	C2CD2L	ENST00000336702	human	ensembl	74_37	+1	known	missense	c.1817	p.R606H	0.992	NULL	superfamily_C2_dom	-	no_errors	C2CD2L	HGNC	ENSG00000172375	tier1	-	-	47	0	0.00	23	7	23.33
C4orf21	0	genome.wustl.edu	37	4	113508884	113508884	+	Nonsense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	4	113508884	113508884	G	T	SNP	C4orf21	ENST00000505019	human	ensembl	74_37	-1	known	nonsense	c.3329	p.S1110*	0.008	NULL	pfam_DUF2439,pfam_Znf_GRF,superfamily_P-loop_NTPase	-	no_errors	C4orf21	HGNC	ENSG00000138658	tier1	-	-	40	0	0.00	43	4	8.51
C9orf3	0	genome.wustl.edu	37	9	97849070	97849070	+	RNA	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	9	97849070	97849070	C	T	SNP	C9orf3	ENST00000463372	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.869	-	-	-	no_errors	C9orf3	HGNC	ENSG00000148120	tier1	-	-	44	0	0.00	35	6	14.63
CALCRL	0	genome.wustl.edu	37	2	188211037	188211037	+	Silent	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	188211037	188211037	A	C	SNP	CALCRL	ENST00000392370	human	ensembl	74_37	-1	known	silent	c.1260	p.S420	0.957	prints_GPCR_2_CGRP1_rcpt	pfam_GPCR_2_secretin-like,pfam_GPCR_2_extracellular_dom,smart_GPCR_2_extracellular_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GCPR_2_calcitonin_rcpt_fam,prints_GPCR_2_CGRP1_rcpt,prints_GPCR_2_secretin-like,prints_GPCR_2_calcitonin_rcpt	-	no_errors	CALCRL	HGNC	ENSG00000064989	tier1	-	-	39	0	0.00	47	14	22.95
CASS4	0	genome.wustl.edu	37	20	55027029	55027029	+	Missense_Mutation	SNP	A	A	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	20	55027029	55027029	A	G	SNP	CASS4	ENST00000360314	human	ensembl	74_37	+1	known	missense	c.797	p.E266G	0.000	NULL	pfam_Serine_rich,pfam_CAS_DUF3513,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	CASS4	HGNC	ENSG00000087589	tier1	-	-	42	0	0.00	26	14	35.00
CCDC114	0	genome.wustl.edu	37	19	48800586	48800586	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	48800586	48800586	G	A	SNP	CCDC114	ENST00000315396	human	ensembl	74_37	-1	known	missense	c.1660	p.R554C	0.158	NULL	NULL	-	no_errors	CCDC114	HGNC	ENSG00000105479				51	0	0.00	44	4	8.16
CCDC30	0	genome.wustl.edu	37	1	42948563	42948563	+	RNA	DEL	A	A	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	42948563	42948563	A	-	DEL	CCDC30	ENST00000475614	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	CCDC30	HGNC	ENSG00000186409	tier1			23	0	0.00	9	3	25.00
CCDC53	0	genome.wustl.edu	37	12	102406899	102406899	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	12	102406899	102406899	G	T	SNP	CCDC53	ENST00000240079	human	ensembl	74_37	-1	known	missense	c.572	p.S191Y	1.000	NULL	pfam_WASH_CCDC53	-	no_errors	CCDC53	HGNC	ENSG00000120860				31	0	0.00	29	2	6.45
CCDC88C	0	genome.wustl.edu	37	14	91774800	91774800	+	Silent	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	14	91774800	91774800	T	C	SNP	CCDC88C	ENST00000389857	human	ensembl	74_37	-1	known	silent	c.2901	p.A967	0.037	NULL	pfam_Hook-related_fam,superfamily_Prefoldin,superfamily_Fum_Rdtase/Succ_DH_flav-like_C	-	no_errors	CCDC88C	HGNC	ENSG00000015133	tier1	-	-	47	0	0.00	58	7	10.77
CCNE1	0	genome.wustl.edu	37	19	30312917	30312917	+	Silent	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	30312917	30312917	T	C	SNP	CCNE1	ENST00000262643	human	ensembl	74_37	+1	known	silent	c.720	p.R240	0.019	pfam_Cyclin_N,superfamily_Cyclin-like,pirsf_Cyclin_A/B/D/E	pfam_Cyclin_N,pfam_Cyclin_C-dom,superfamily_Cyclin-like,smart_Cyclin-like,pirsf_Cyclin_A/B/D/E	-	no_errors	CCNE1	HGNC	ENSG00000105173	tier1	-	-	57	0	0.00	27	9	25.00
CCT5	0	genome.wustl.edu	37	5	10262705	10262705	+	Missense_Mutation	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	10262705	10262705	T	C	SNP	CCT5	ENST00000280326	human	ensembl	74_37	+1	known	missense	c.1292	p.L431P	0.997	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,tigrfam_Chap_CCT_epsi	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_epsi	-	no_errors	CCT5	HGNC	ENSG00000150753	tier1	-	-	90	0	0.00	61	4	6.15
CD1D	0	genome.wustl.edu	37	1	158151871	158151871	+	Silent	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	158151871	158151871	C	T	SNP	CD1D	ENST00000368171	human	ensembl	74_37	+1	known	silent	c.378	p.N126	0.000	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1D	HGNC	ENSG00000158473	tier1	-	-	38	0	0.00	27	6	18.18
CD1E	0	genome.wustl.edu	37	1	158325179	158325179	+	Missense_Mutation	SNP	A	A	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	158325179	158325179	A	T	SNP	CD1E	ENST00000368167	human	ensembl	74_37	+1	known	missense	c.445	p.S149C	1.000	superfamily_MHC_I/II-like_Ag-recog	pfam_Ig_C1-set,superfamily_MHC_I/II-like_Ag-recog,smart_Ig_C1-set,pfscan_Ig-like_dom	-	no_errors	CD1E	HGNC	ENSG00000158488	tier1	-	-	28	0	0.00	44	9	16.67
CDH17	0	genome.wustl.edu	37	8	95182682	95182682	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	95182682	95182682	G	A	SNP	CDH17	ENST00000027335	human	ensembl	74_37	-1	known	missense	c.1009	p.P337S	1.000	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH17	HGNC	ENSG00000079112	tier1	-	-	96	0	0.00	125	13	9.29
CDRT1	0	genome.wustl.edu	37	17	15510949	15510949	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	17	15510949	15510949	C	A	SNP	CDRT1	ENST00000395906	human	ensembl	74_37	-1	known	missense	c.1171	p.V391F	0.285	superfamily_F-box_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,superfamily_F-box_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	CDRT1	HGNC	ENSG00000241322	tier1	-	-	207	0	0.00	111	21	15.91
CEBPZ	0	genome.wustl.edu	37	2	37454908	37454908	+	Frame_Shift_Del	DEL	T	T	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	37454908	37454908	T	-	DEL	CEBPZ	ENST00000234170	human	ensembl	74_37	-1	known	frame_shift_del	c.1428	p.D477fs	1.000	superfamily_ARM-type_fold	pfam_CCAAT-binding_factor,superfamily_ARM-type_fold	-	no_errors	CEBPZ	HGNC	ENSG00000115816	tier1			55	0	0.00	51	6	10.53
CECR7	0	genome.wustl.edu	37	22	17525784	17525784	+	RNA	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	22	17525784	17525784	G	A	SNP	CECR7	ENST00000414401	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CECR7	HGNC	ENSG00000237438	tier1	-	-	46	0	0.00	44	15	25.42
CHD3	0	genome.wustl.edu	37	17	7807298	7807300	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	17	7807298	7807300	GAA	-	DEL	CHD3	ENST00000330494	human	ensembl	74_37	+1	known	in_frame_del	c.3883_3885	p.E1296in_frame_del	1.000:1.000:1.000	pfam_DUF1087	pfam_CHD_C2,pfam_SNF2_N,pfam_DUF1086,pfam_CHD_N,pfam_DUF1087,pfam_Znf_PHD-finger,pfam_Chromo_domain,pfam_Helicase_C,pfam_HDA_complex_subunit-2/3,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Znf_PHD-finger,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD3	HGNC	ENSG00000170004	tier1			32	0	0.00	25	2	7.41
CIT	0	genome.wustl.edu	37	12	120139670	120139670	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	12	120139670	120139670	G	T	SNP	CIT	ENST00000261833	human	ensembl	74_37	-1	known	missense	c.5272	p.Q1758K	1.000	pfam_Citron,smart_Citron,pirsf_Citron_Rho-interacting_kinase	pfam_Citron,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_HR1_rho-bd,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_Pleckstrin_homology,smart_Citron,pirsf_Citron_Rho-interacting_kinase,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	CIT	HGNC	ENSG00000122966	tier1	-	-	50	0	0.00	46	4	7.84
CIZ1	0	genome.wustl.edu	37	9	130928628	130928628	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	9	130928628	130928628	C	T	SNP	CIZ1	ENST00000538431	human	ensembl	74_37	-1	known	missense	c.2623	p.A875T	0.962	NULL	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like,pfscan_Znf_C2H2_matrin	-	no_errors	CIZ1	HGNC	ENSG00000148337	tier1	-	-	195	0	0.00	202	44	17.89
CLEC4F	0	genome.wustl.edu	37	2	71046546	71046546	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	71046546	71046546	G	A	SNP	CLEC4F	ENST00000272367	human	ensembl	74_37	-1	known	missense	c.209	p.P70L	0.000	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,superfamily_Prefoldin,smart_C-type_lectin,prints_AntifreezeII,pfscan_C-type_lectin	-	no_errors	CLEC4F	HGNC	ENSG00000152672	tier1	-	-	58	0	0.00	66	7	9.46
CLK4	0	genome.wustl.edu	37	5	178045592	178045592	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	178045592	178045592	G	A	SNP	CLK4	ENST00000316308	human	ensembl	74_37	-1	known	missense	c.349	p.R117C	1.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CLK4	HGNC	ENSG00000113240	tier1	-	-	81	0	0.00	50	11	18.03
CNST	0	genome.wustl.edu	37	1	246755187	246755187	+	Missense_Mutation	SNP	T	T	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	246755187	246755187	T	A	SNP	CNST	ENST00000366513	human	ensembl	74_37	+1	known	missense	c.323	p.I108N	0.000	NULL	NULL	-	no_errors	CNST	HGNC	ENSG00000162852	tier1	-	-	25	0	0.00	31	10	24.39
COL11A2	0	genome.wustl.edu	37	6	33138892	33138892	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	6	33138892	33138892	G	A	SNP	COL11A2	ENST00000341947	human	ensembl	74_37	-1	known	missense	c.3365	p.A1122V	1.000	pfam_Collagen	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A2	HGNC	ENSG00000204248	tier1	-	-	25	0	0.00	18	6	25.00
COL5A2	0	genome.wustl.edu	37	2	189945770	189945770	+	Splice_Site	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	189945770	189945770	C	A	SNP	COL5A2	ENST00000374866	human	ensembl	74_37	-1	known	splice_site	c.853-1	e13-1	1.000	-	-	-	no_errors	COL5A2	HGNC	ENSG00000204262				49	0	0.00	57	3	5.00
CPO	0	genome.wustl.edu	37	2	207834128	207834128	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	207834128	207834128	G	A	SNP	CPO	ENST00000272852	human	ensembl	74_37	+1	known	missense	c.1093	p.G365S	0.000	NULL	pfam_Peptidase_M14,smart_Peptidase_M14,prints_Peptidase_M14	-	no_errors	CPO	HGNC	ENSG00000144410	tier1	-	-	47	0	0.00	58	6	9.38
CR2	0	genome.wustl.edu	37	1	207648206	207648206	+	Silent	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	207648206	207648206	G	A	SNP	CR2	ENST00000367057	human	ensembl	74_37	+1	known	silent	c.2361	p.G787	0.368	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	-	no_errors	CR2	HGNC	ENSG00000117322				20	0	0.00	17	5	22.73
CRYGEP	0	genome.wustl.edu	37	2	208977059	208977059	+	RNA	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	208977059	208977059	G	A	SNP	CRYGEP	ENST00000440809	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.958	-	-	-	no_errors	CRYGEP	HGNC	ENSG00000229150	tier1	-	-	52	0	0.00	70	13	15.66
CSMD1	0	genome.wustl.edu	37	8	2966266	2966266	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	2966266	2966266	C	T	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.6616	p.G2206S	1.000	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	40	0	0.00	23	11	32.35
CSMD2	0	genome.wustl.edu	37	1	34042918	34042918	+	Silent	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	34042918	34042918	G	A	SNP	CSMD2	ENST00000373381	human	ensembl	74_37	-1	known	silent	c.7554	p.S2518	0.756	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD2	HGNC	ENSG00000121904	tier1	-	-	51	0	0.00	31	13	29.55
CSMD3	0	genome.wustl.edu	37	8	114186075	114186075	+	Silent	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	114186075	114186075	G	A	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	silent	c.585	p.D195	0.124	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	rs151216366	-	46	0	0.00	69	4	5.48
CTSE	0	genome.wustl.edu	37	1	206331026	206331026	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	206331026	206331026	C	T	SNP	CTSE	ENST00000360218	human	ensembl	74_37	+1	known	missense	c.890	p.S297L	0.000	NULL	pfam_Aspartic_peptidase,pfam_Aspartic_peptidase_N,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	-	no_errors	CTSE	HGNC	ENSG00000196188	tier1	-	-	42	0	0.00	26	15	36.59
CXXC11	0	genome.wustl.edu	37	2	242813928	242813928	+	Missense_Mutation	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	242813928	242813928	T	C	SNP	CXXC11	ENST00000343216	human	ensembl	74_37	+1	known	missense	c.221	p.L74P	0.984	NULL	NULL	-	no_errors	CXXC11	HGNC	ENSG00000188011				71	0	0.00	51	3	5.45
CYP4B1	0	genome.wustl.edu	37	1	47280896	47280896	+	Nonsense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	47280896	47280896	G	T	SNP	CYP4B1	ENST00000371923	human	ensembl	74_37	+1	known	nonsense	c.1033	p.E345*	1.000	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4B1	HGNC	ENSG00000142973				28	0	0.00	39	6	13.33
DDX24	0	genome.wustl.edu	37	14	94528651	94528651	+	Silent	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	14	94528651	94528651	G	A	SNP	DDX24	ENST00000330836	human	ensembl	74_37	-1	known	silent	c.1035	p.I345	0.002	pfam_DNA/RNA_helicase_DEAD/DEAH_N,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX24	HGNC	ENSG00000089737	tier1	-	-	64	0	0.00	69	11	13.75
DIP2C	0	genome.wustl.edu	37	10	408572	408572	+	Silent	SNP	G	G	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	10	408572	408572	G	C	SNP	DIP2C	ENST00000280886	human	ensembl	74_37	-1	known	silent	c.2652	p.T884	0.996	NULL	pfam_AMP-dep_Synth/Lig,pfam_DMAP1-bd	-	no_errors	DIP2C	HGNC	ENSG00000151240	tier1	-	-	42	0	0.00	36	18	33.33
DNAJA4	0	genome.wustl.edu	37	15	78572425	78572425	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	15	78572425	78572425	G	T	SNP	DNAJA4	ENST00000394855	human	ensembl	74_37	+1	known	missense	c.1003	p.D335Y	0.426	pfam_DnaJ_C,superfamily_HSP40/DnaJ_pept-bd	pfam_DnaJ_domain,pfam_DnaJ_C,pfam_HSP_DnaJ_Cys-rich_dom,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,superfamily_HSP_DnaJ_Cys-rich_dom,smart_DnaJ_domain,pfscan_DnaJ_domain,pfscan_HSP_DnaJ_Cys-rich_dom,prints_DnaJ_domain	-	no_errors	DNAJA4	HGNC	ENSG00000140403				62	0	0.00	26	2	7.14
DPH7	0	genome.wustl.edu	37	9	140473262	140473262	+	RNA	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	9	140473262	140473262	T	C	SNP	DPH7	ENST00000467768	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	DPH7	HGNC	ENSG00000148399	tier1	-	-	44	0	0.00	13	15	53.57
DSCC1	0	genome.wustl.edu	37	8	120847177	120847177	+	Missense_Mutation	SNP	G	G	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	120847177	120847177	G	C	SNP	DSCC1	ENST00000313655	human	ensembl	74_37	-1	known	missense	c.1138	p.Q380E	1.000	NULL	pfam_Sister_chromatid_cohesion_Dcc1	-	no_errors	DSCC1	HGNC	ENSG00000136982	tier1	-	-	92	0	0.00	78	15	16.13
DUSP22	0	genome.wustl.edu	37	6	348942	348942	+	Silent	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	6	348942	348942	G	A	SNP	DUSP22	ENST00000419235	human	ensembl	74_37	+1	known	silent	c.609	p.T203	0.048	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_Tyr_Pase_rcpt/non-rcpt,smart_Dual-sp_phosphatase_subgr_cat,prints_Atypical_DUSP,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	DUSP22	HGNC	ENSG00000112679				24	0	0.00	24	3	11.11
DZIP3	0	genome.wustl.edu	37	3	108353773	108353773	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	3	108353773	108353773	G	T	SNP	DZIP3	ENST00000361582	human	ensembl	74_37	+1	known	missense	c.872	p.C291F	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	DZIP3	HGNC	ENSG00000198919	tier1	-	-	111	0	0.00	85	12	12.37
EFR3B	0	genome.wustl.edu	37	2	25344587	25344587	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	25344587	25344587	C	T	SNP	EFR3B	ENST00000403714	human	ensembl	74_37	+1	known	missense	c.409	p.R137W	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	EFR3B	HGNC	ENSG00000084710	tier1	-	-	65	0	0.00	47	7	12.96
EGR4	0	genome.wustl.edu	37	2	73519308	73519308	+	Silent	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	73519308	73519308	G	A	SNP	EGR4	ENST00000545030	human	ensembl	74_37	-1	known	silent	c.1047	p.I349	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	EGR4	HGNC	ENSG00000135625	tier1	-	-	54	0	0.00	48	21	30.43
EID2B	0	genome.wustl.edu	37	19	40022958	40022958	+	Nonstop_Mutation	SNP	C	C	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	40022958	40022958	C	G	SNP	EID2B	ENST00000326282	human	ensembl	74_37	-1	known	nonstop	c.485	p.*162S	0.215	NULL	NULL	-	no_errors	EID2B	HGNC	ENSG00000176401	tier1	-	-	33	0	0.00	23	10	30.30
ENSG00000180458	0	genome.wustl.edu	37	19	38039815	38039815	+	RNA	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	38039815	38039815	C	T	SNP	ENSG00000180458	ENST00000316807	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	CTD-3064H18.4	Clone_based_vega_gene	ENSG00000180458	tier1	-	-	76	0	0.00	52	14	21.21
ENSG00000180458	0	genome.wustl.edu	37	19	38039849	38039849	+	RNA	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	38039849	38039849	G	A	SNP	ENSG00000180458	ENST00000316807	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	CTD-3064H18.4	Clone_based_vega_gene	ENSG00000180458				53	0	0.00	43	4	8.51
ENSG00000183154	0	genome.wustl.edu	37	8	37593499	37593499	+	Missense_Mutation	SNP	G	G	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	37593499	37593499	G	C	SNP	ENSG00000183154	ENST00000330539	human	ensembl	74_37	-1	putative	missense	c.517	p.P173A	0.004	NULL	NULL	-	no_errors	RP11-863K10.7	Clone_based_vega_gene	ENSG00000183154	tier1	-	-	24	0	0.00	23	4	14.81
ENSG00000215398	0	genome.wustl.edu	37	14	19117128	19117128	+	RNA	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	14	19117128	19117128	G	T	SNP	ENSG00000215398	ENST00000553170	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	RP11-754I20.1	Clone_based_vega_gene	ENSG00000215398	tier1	-	-	257	0	0.00	208	20	8.77
ENSG00000227082	0	genome.wustl.edu	37	1	121138853	121138853	+	RNA	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	121138853	121138853	G	A	SNP	ENSG00000227082	ENST00000417218	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.951	-	-	-	no_errors	AL592494.5	Clone_based_vega_gene	ENSG00000227082	tier1	rs184767318	-	16	0	0.00	14	7	33.33
ENSG00000247121	0	genome.wustl.edu	37	5	96271507	96271507	+	RNA	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	96271507	96271507	G	T	SNP	ENSG00000247121	ENST00000501338	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CTD-2260A17.2	Clone_based_vega_gene	ENSG00000247121	tier1	-	-	33	0	0.00	11	3	21.43
ENSG00000258603	0	genome.wustl.edu	37	14	74083691	74083691	+	RNA	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	14	74083691	74083691	C	T	SNP	ENSG00000258603	ENST00000555011	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.604	-	-	-	no_errors	RP3-414A15.10	Clone_based_vega_gene	ENSG00000258603	tier1	-	-	58	0	0.00	43	11	20.00
ENSG00000270580	0	genome.wustl.edu	37	16	15208399	15208399	+	RNA	SNP	A	A	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	16	15208399	15208399	A	G	SNP	ENSG00000270580	ENST00000340301	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-1186N24.5	Clone_based_vega_gene	ENSG00000270580	tier1	-	-	205	0	0.00	141	28	16.57
ETNK1	0	genome.wustl.edu	37	12	22824229	22824229	+	Nonsense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	12	22824229	22824229	G	T	SNP	ETNK1	ENST00000266517	human	ensembl	74_37	+1	known	nonsense	c.991	p.E331*	1.000	pfam_Aminoglycoside_PTrfase,pfam_DUF227,superfamily_Kinase-like_dom	pfam_Aminoglycoside_PTrfase,pfam_DUF227,superfamily_Kinase-like_dom	-	no_errors	ETNK1	HGNC	ENSG00000139163				31	0	0.00	25	2	7.41
EXO1	0	genome.wustl.edu	37	1	242035465	242035465	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	242035465	242035465	C	T	SNP	EXO1	ENST00000348581	human	ensembl	74_37	+1	known	missense	c.1399	p.P467S	0.000	NULL	pfam_XPG-I_dom,pfam_XPG_DNA_repair_N,superfamily_5-3_exonuclease_C,smart_XPG_DNA_repair_N,smart_XPG-I_dom,smart_HhH2,prints_XPG/Rad2	-	no_errors	EXO1	HGNC	ENSG00000174371	tier1	-	-	59	0	0.00	33	8	19.51
FAM193A	0	genome.wustl.edu	37	4	2692599	2692599	+	Frame_Shift_Del	DEL	C	C	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	4	2692599	2692599	C	-	DEL	FAM193A	ENST00000324666	human	ensembl	74_37	+1	known	frame_shift_del	c.1832	p.T612fs	1.000	NULL	NULL	-	no_errors	FAM193A	HGNC	ENSG00000125386	tier1			18	0	0.00	27	6	18.18
FAM193A	0	genome.wustl.edu	37	4	2664632	2664632	+	Missense_Mutation	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	4	2664632	2664632	T	C	SNP	FAM193A	ENST00000324666	human	ensembl	74_37	+1	known	missense	c.940	p.Y314H	1.000	NULL	NULL	-	no_errors	FAM193A	HGNC	ENSG00000125386				37	0	0.00	47	4	7.84
FAM65A	0	genome.wustl.edu	37	16	67579416	67579416	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	16	67579416	67579416	G	A	SNP	FAM65A	ENST00000422602	human	ensembl	74_37	+1	known	missense	c.3229	p.V1077M	1.000	NULL	superfamily_ARM-type_fold,superfamily_HR1_rho-bd	-	no_errors	FAM65A	HGNC	ENSG00000039523				24	0	0.00	29	3	9.38
FBN1	0	genome.wustl.edu	37	15	48773943	48773943	+	Silent	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	15	48773943	48773943	G	A	SNP	FBN1	ENST00000316623	human	ensembl	74_37	-1	known	silent	c.3873	p.C1291	1.000	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_FBN,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,pfam_EG-like_dom,pfam_TB_dom,superfamily_TB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pirsf_FBN,pfscan_EG-like_dom	-	no_errors	FBN1	HGNC	ENSG00000166147	tier1	-	-	47	0	0.00	26	5	16.13
FTH1P10	0	genome.wustl.edu	37	5	17354524	17354524	+	RNA	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	17354524	17354524	G	A	SNP	FTH1P10	ENST00000401830	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	FTH1P10	HGNC	ENSG00000223361	tier1	-	-	75	0	0.00	45	6	11.54
FUCA2	0	genome.wustl.edu	37	6	143828513	143828513	+	Missense_Mutation	SNP	T	T	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	6	143828513	143828513	T	G	SNP	FUCA2	ENST00000002165	human	ensembl	74_37	-1	known	missense	c.273	p.K91N	0.041	pfam_Glyco_hydro_29,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_29,pirsf_Glyco_hydro_29_sub,prints_Glyco_hydro_29_sub	pfam_Glyco_hydro_29,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_29,pirsf_Glyco_hydro_29_sub,prints_Glyco_hydro_29_sub	-	no_errors	FUCA2	HGNC	ENSG00000001036	tier1	-	-	64	0	0.00	56	18	24.32
GAP43	0	genome.wustl.edu	37	3	115342544	115342544	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	3	115342544	115342544	G	T	SNP	GAP43	ENST00000305124	human	ensembl	74_37	+1	known	missense	c.8	p.C3F	1.000	pfam_Neuromodulin_gap-junction_N,prints_Neuromodulin	pfam_Neuromodulin_C,pfam_Neuromodulin_gap-junction_N,pfam_IQ_motif_EF-hand-BS,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Neuromodulin	-	no_errors	GAP43	HGNC	ENSG00000172020				38	0	0.00	22	2	8.33
GART	0	genome.wustl.edu	37	21	34876758	34876758	+	Silent	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	21	34876758	34876758	G	T	SNP	GART	ENST00000381815	human	ensembl	74_37	-1	known	silent	c.2802	p.T934	0.004	pfam_Formyl_transf_N,superfamily_Formyl_transf_N,tigrfam_PurN_trans	pfam_PRibGlycinamid_synth_ATP-grasp,pfam_Formyl_transf_N,pfam_PRibGlycinamide_synth_N,pfam_AIR_synth_C_dom,pfam_PRibGlycinamide_synth_C-dom,pfam_AIR_synth_N_dom,pfam_ATP-grasp_carboxylate-amine,pfam_CbamoylP_synth_lsu-like_ATP-bd,superfamily_Formyl_transf_N,superfamily_AIR_synth_C_dom,superfamily_PurM_N-like,superfamily_PreATP-grasp_dom,superfamily_Rudment_hybrid_motif,pfscan_ATP-grasp,tigrfam_PRibGlycinamide_synth,tigrfam_PurM_cligase,tigrfam_PurN_trans	-	no_errors	GART	HGNC	ENSG00000159131				23	0	0.00	36	2	5.26
GATAD2A	0	genome.wustl.edu	37	19	19603235	19603235	+	Silent	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	19603235	19603235	C	T	SNP	GATAD2A	ENST00000358713	human	ensembl	74_37	+1	known	silent	c.390	p.T130	0.063	NULL	pfam_Znf_GATA,pfscan_Znf_GATA	-	no_errors	GATAD2A	HGNC	ENSG00000167491	tier1	-	-	36	0	0.00	15	9	37.50
GCG	0	genome.wustl.edu	37	2	163002170	163002170	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	163002170	163002170	C	T	SNP	GCG	ENST00000375497	human	ensembl	74_37	-1	known	missense	c.272	p.R91H	1.000	NULL	pfam_Glucagon_GIP_secretin_VIP,smart_Glucagon_GIP_secretin_VIP,prints_Glucagon_GIP_secretin_VIP	-	no_errors	GCG	HGNC	ENSG00000115263	tier1	rs35920035	-	43	0	0.00	39	10	20.41
GNAS	0	genome.wustl.edu	37	20	57428459	57428459	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	20	57428459	57428459	G	A	SNP	GNAS	ENST00000371100	human	ensembl	74_37	+1	putative	missense	c.139	p.E47K	1.000	NULL	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460	tier1	-	-	16	0	0.00	12	6	33.33
GTF2IRD2P1	0	genome.wustl.edu	37	7	72658020	72658020	+	RNA	SNP	T	T	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	7	72658020	72658020	T	A	SNP	GTF2IRD2P1	ENST00000425256	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.866	-	-	-	no_errors	GTF2IRD2P1	HGNC	ENSG00000214544	tier1	-	-	41	0	0.00	34	5	12.82
HARS2	0	genome.wustl.edu	37	5	140075409	140075409	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	140075409	140075409	G	T	SNP	HARS2	ENST00000230771	human	ensembl	74_37	+1	known	missense	c.612	p.Q204H	0.876	pfam_aa-tRNA-synt_IIb_cons-dom,pirsf_HisRS/HisZ,pfscan_aa-tRNA-synth_II,tigrfam_His-tRNA-ligase	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Anticodon-bd,superfamily_Anticodon-bd,pirsf_HisRS/HisZ,pfscan_aa-tRNA-synth_II,tigrfam_His-tRNA-ligase	-	no_errors	HARS2	HGNC	ENSG00000112855				71	0	0.00	45	4	8.16
HCK	0	genome.wustl.edu	37	20	30671802	30671802	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	20	30671802	30671802	G	A	SNP	HCK	ENST00000375852	human	ensembl	74_37	+1	known	missense	c.638	p.R213Q	0.565	pfam_SH2,smart_SH2,pfscan_SH2	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,pfam_SH3_domain,pfam_SH3_2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2,prints_SH3_domain	-	no_errors	HCK	HGNC	ENSG00000101336				17	0	0.00	14	3	17.65
HECW1	0	genome.wustl.edu	37	7	43503287	43503287	+	Missense_Mutation	SNP	A	A	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	7	43503287	43503287	A	G	SNP	HECW1	ENST00000395891	human	ensembl	74_37	+1	known	missense	c.2680	p.T894A	1.000	NULL	pfam_HECT,pfam_WW_dom,pfam_C2_dom,superfamily_HECT,superfamily_WW_dom,superfamily_C2_dom,smart_C2_dom,smart_WW_dom,smart_HECT,pfscan_HECT,pfscan_C2_dom,pfscan_WW_dom	-	no_errors	HECW1	HGNC	ENSG00000002746				42	0	0.00	38	2	5.00
HMCN1	0	genome.wustl.edu	37	1	186086741	186086741	+	Missense_Mutation	SNP	G	G	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	186086741	186086741	G	C	SNP	HMCN1	ENST00000271588	human	ensembl	74_37	+1	known	missense	c.11834	p.R3945T	1.000	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_G2_nidogen/fibulin_G2F,pfam_EGF-like_Ca-bd_dom,pfam_Thrombospondin_1_rpt,superfamily_GFP,superfamily_Thrombospondin_1_rpt,superfamily_Growth_fac_rcpt_N_dom,superfamily_Cadherin-like,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Thrombospondin_1_rpt,smart_G2_nidogen/fibulin_G2F,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	HMCN1	HGNC	ENSG00000143341	tier1	-	-	33	0	0.00	49	42	46.15
HMHA1	0	genome.wustl.edu	37	19	1073196	1073196	+	Missense_Mutation	SNP	C	C	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	1073196	1073196	C	G	SNP	HMHA1	ENST00000313093	human	ensembl	74_37	+1	known	missense	c.470	p.A157G	0.994	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_FCH_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_RhoGAP_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_RhoGAP_dom	-	no_errors	HMHA1	HGNC	ENSG00000180448	tier1	-	-	39	0	0.00	30	8	21.05
IGSF10	0	genome.wustl.edu	37	3	151163489	151163489	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	3	151163489	151163489	G	A	SNP	IGSF10	ENST00000282466	human	ensembl	74_37	-1	known	missense	c.4280	p.A1427V	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	-	no_errors	IGSF10	HGNC	ENSG00000152580				107	0	0.00	94	5	5.05
IRX1	0	genome.wustl.edu	37	5	3600242	3600242	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	3600242	3600242	G	A	SNP	IRX1	ENST00000302006	human	ensembl	74_37	+1	known	missense	c.1180	p.V394I	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,smart_Iroquois_homeo,pfscan_Homeobox_dom	-	no_errors	IRX1	HGNC	ENSG00000170549				17	0	0.00	11	6	35.29
IVL	0	genome.wustl.edu	37	1	152882818	152882818	+	Missense_Mutation	SNP	A	A	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	152882818	152882818	A	T	SNP	IVL	ENST00000368764	human	ensembl	74_37	+1	known	missense	c.545	p.Q182L	0.264	pfam_Involucrin_rpt	pfam_Involucrin_N,pfam_Involucrin_rpt	-	no_errors	IVL	HGNC	ENSG00000163207	tier1	-	-	50	0	0.00	79	8	9.20
JAKMIP1	0	genome.wustl.edu	37	4	6037791	6037791	+	Missense_Mutation	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	4	6037791	6037791	T	C	SNP	JAKMIP1	ENST00000409021	human	ensembl	74_37	-1	known	missense	c.2219	p.Q740R	1.000	NULL	NULL	-	no_errors	JAKMIP1	HGNC	ENSG00000152969	tier1	-	-	61	0	0.00	43	5	10.42
KBTBD6	0	genome.wustl.edu	37	13	41705091	41705091	+	Silent	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	13	41705091	41705091	G	A	SNP	KBTBD6	ENST00000379485	human	ensembl	74_37	-1	known	silent	c.1557	p.C519	0.993	NULL	pfam_BTB_POZ,pfam_BACK,pfam_Kelch_1,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pfscan_BTB/POZ-like	-	no_errors	KBTBD6	HGNC	ENSG00000165572				32	0	0.00	29	2	6.45
KCNAB2	0	genome.wustl.edu	37	1	6156793	6156793	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	6156793	6156793	G	A	SNP	KCNAB2	ENST00000378083	human	ensembl	74_37	+1	known	missense	c.1046	p.C349Y	1.000	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,tigrfam_K_chnl_volt-dep_bsu_KCNAB	pfam_NADP_OxRdtase_dom,superfamily_NADP_OxRdtase_dom,prints_K_chnl_volt-dep_bsu_KCNAB1,prints_K_chnl_volt-dep_bsu_KCNAB2,prints_K_chnl_volt-dep_bsu_KCNAB-rel,prints_K_chnl_volt-dep_bsu_KCNAB3,tigrfam_K_chnl_volt-dep_bsu_KCNAB	-	no_errors	KCNAB2	HGNC	ENSG00000069424				22	0	0.00	30	4	11.76
KCNC3	0	genome.wustl.edu	37	19	50831847	50831847	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	50831847	50831847	G	T	SNP	KCNC3	ENST00000477616	human	ensembl	74_37	-1	known	missense	c.493	p.P165T	1.000	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl_volt-dep_Kv3	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,pfam_K_chnl_volt-dep_Kv3_ID,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv3.3,prints_K_chnl_volt-dep_Kv3,prints_K_chnl_volt-dep_Kv	-	no_errors	KCNC3	HGNC	ENSG00000131398				79	0	0.00	73	4	5.19
KCNN3	0	genome.wustl.edu	37	1	154842241	154842241	+	Missense_Mutation	SNP	T	T	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	154842241	154842241	T	A	SNP	KCNN3	ENST00000271915	human	ensembl	74_37	-1	novel	missense	c.200	p.Q67L	0.941	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom,prints_K_chnl_Ca-activ_SK	-	no_errors	KCNN3	HGNC	ENSG00000143603				66	0	0.00	117	7	5.56
KCNN4	0	genome.wustl.edu	37	19	44271780	44271780	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	44271780	44271780	G	A	SNP	KCNN4	ENST00000262888	human	ensembl	74_37	-1	known	missense	c.1199	p.A400V	0.896	NULL	pfam_K_chnl_Ca-activ_SK,pfam_CaM-bd_dom,pfam_2pore_dom_K_chnl_dom,superfamily_CaM-bd_dom	-	no_errors	KCNN4	HGNC	ENSG00000104783	tier1	-	-	28	0	0.00	33	14	29.79
KIAA0947	0	genome.wustl.edu	37	5	5457453	5457453	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	5457453	5457453	G	A	SNP	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	missense	c.700	p.A234T	0.975	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151				29	0	0.00	36	3	7.69
KIAA0947	0	genome.wustl.edu	37	5	5464411	5464411	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	5464411	5464411	C	T	SNP	KIAA0947	ENST00000296564	human	ensembl	74_37	+1	known	missense	c.4964	p.S1655L	0.054	NULL	superfamily_Vitellinogen_superhlx	-	no_errors	KIAA0947	HGNC	ENSG00000164151				17	0	0.00	19	2	9.52
KIAA1147	0	genome.wustl.edu	37	7	141364844	141364844	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	7	141364844	141364844	C	A	SNP	KIAA1147	ENST00000536163	human	ensembl	74_37	-1	known	missense	c.963	p.E321D	1.000	pfam_DUF2347	pfam_DUF2347	-	no_errors	KIAA1147	HGNC	ENSG00000257093	tier1	-	-	42	0	0.00	23	22	48.89
KIF1C	0	genome.wustl.edu	37	17	4908250	4908250	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	17	4908250	4908250	C	T	SNP	KIF1C	ENST00000320785	human	ensembl	74_37	+1	known	missense	c.1120	p.R374W	1.000	NULL	pfam_Kinesin_motor_dom,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1C	HGNC	ENSG00000129250	tier1	-	-	50	0	0.00	28	4	12.50
KIF20B	0	genome.wustl.edu	37	10	91497155	91497155	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	10	91497155	91497155	G	T	SNP	KIF20B	ENST00000416354	human	ensembl	74_37	+1	known	missense	c.2647	p.V883F	0.000	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF20B	HGNC	ENSG00000138182	tier1	-	-	76	0	0.00	60	4	6.25
KRT85	0	genome.wustl.edu	37	12	52755284	52755284	+	Splice_Site	SNP	T	T	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	12	52755284	52755284	T	G	SNP	KRT85	ENST00000257901	human	ensembl	74_37	-1	known	splice_site	c.1299-2	e8-2	0.970	-	-	-	no_errors	KRT85	HGNC	ENSG00000135443	tier1	-	-	47	0	0.00	30	9	23.08
LATS2	0	genome.wustl.edu	37	13	21555733	21555733	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	13	21555733	21555733	G	A	SNP	LATS2	ENST00000382592	human	ensembl	74_37	-1	known	missense	c.2537	p.S846F	0.998	superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	LATS2	HGNC	ENSG00000150457	tier1	-	-	32	0	0.00	13	11	45.83
LCE1D	0	genome.wustl.edu	37	1	152770547	152770547	+	Missense_Mutation	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	152770547	152770547	A	C	SNP	LCE1D	ENST00000326233	human	ensembl	74_37	+1	known	missense	c.277	p.S93R	0.765	NULL	NULL	-	no_errors	LCE1D	HGNC	ENSG00000172155	tier1	-	-	66	0	0.00	100	9	8.26
LCP1	0	genome.wustl.edu	37	13	46708338	46708338	+	Missense_Mutation	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	13	46708338	46708338	T	C	SNP	LCP1	ENST00000323076	human	ensembl	74_37	-1	known	missense	c.1550	p.N517S	0.960	superfamily_CH-domain,smart_CH-domain,pfscan_CH-domain	pfam_CH-domain,pfam_EF_hand_dom,pfam_CAMSAP_CH,superfamily_CH-domain,smart_EF_hand_dom,smart_CH-domain,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	LCP1	HGNC	ENSG00000136167				26	0	0.00	34	3	8.11
LINC00461	0	genome.wustl.edu	37	5	87969079	87969079	+	RNA	DEL	A	A	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	87969079	87969079	A	-	DEL	LINC00461	ENST00000505030	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.276	-	-	-	no_errors	LINC00461	HGNC	ENSG00000245526	tier1			45	0	0.00	29	2	6.45
LPHN3	0	genome.wustl.edu	37	4	62758482	62758482	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	4	62758482	62758482	G	A	SNP	LPHN3	ENST00000507625	human	ensembl	74_37	+1	known	missense	c.1589	p.R530K	1.000	NULL	pfam_GPCR_2_latrophilin_rcpt_C,pfam_Olfac-like,pfam_DUF3497,pfam_GPCR_2_secretin-like,pfam_Lectin_gal-bd_dom,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,smart_Olfac-like,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_GPS_dom,pfscan_Lectin_gal-bd_dom,pfscan_Olfac-like,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_GPCR_2_latrophilin,prints_GPCR_2_secretin-like	-	no_errors	LPHN3	HGNC	ENSG00000150471	tier1	-	-	37	0	0.00	17	5	22.73
LRP1B	0	genome.wustl.edu	37	2	141079546	141079546	+	Missense_Mutation	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	141079546	141079546	T	C	SNP	LRP1B	ENST00000389484	human	ensembl	74_37	-1	known	missense	c.12626	p.D4209G	1.000	superfamily_Growth_fac_rcpt_N_dom	pfam_LDrepeatLR_classA_rpt,pfam_LDLR_classB_rpt,pfam_EG-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_LDrepeatLR_classA_rpt,smart_LDrepeatLR_classA_rpt,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDrepeatLR_classA_rpt,pfscan_LDLR_classB_rpt,prints_LDrepeatLR_classA_rpt	-	no_errors	LRP1B	HGNC	ENSG00000168702	tier1	-	-	39	0	0.00	36	9	20.00
LRRIQ3	0	genome.wustl.edu	37	1	74621378	74621378	+	RNA	SNP	T	T	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	74621378	74621378	T	G	SNP	LRRIQ3	ENST00000495179	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	LRRIQ3	HGNC	ENSG00000162620	tier1	-	-	108	0	0.00	86	21	19.44
LYST	0	genome.wustl.edu	37	1	235972611	235972611	+	Nonsense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	235972611	235972611	G	A	SNP	LYST	ENST00000389793	human	ensembl	74_37	-1	known	nonsense	c.1507	p.R503*	0.986	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	LYST	HGNC	ENSG00000143669	tier1	-	-	29	0	0.00	27	6	18.18
MAN1B1	0	genome.wustl.edu	37	9	139998207	139998207	+	RNA	SNP	G	G	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	9	139998207	139998207	G	C	SNP	MAN1B1	ENST00000540391	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.102	-	-	-	no_errors	MAN1B1	HGNC	ENSG00000177239	tier1	-	-	182	0	0.00	147	15	9.09
MAN2B2	0	genome.wustl.edu	37	4	6612647	6612647	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	4	6612647	6612647	G	A	SNP	MAN2B2	ENST00000285599	human	ensembl	74_37	+1	known	missense	c.2300	p.G767D	0.000	pfam_Glyco_hydro_38_C,superfamily_Gal_mutarotase_SF_dom	pfam_Glyco_hydro_38_N,pfam_Glyco_hydro_38_C,pfam_Glyco_hydro_38_cen_dom,superfamily_Gal_mutarotase_SF_dom,superfamily_Glyco_hydro/deAcase_b/a-brl,smart_Glyco_hydro_38_cen_dom	-	no_errors	MAN2B2	HGNC	ENSG00000013288	tier1	-	-	58	0	0.00	48	4	7.69
MAP1S	0	genome.wustl.edu	37	19	17844182	17844182	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	17844182	17844182	G	A	SNP	MAP1S	ENST00000324096	human	ensembl	74_37	+1	known	missense	c.2969	p.R990Q	0.994	NULL	NULL	-	no_errors	MAP1S	HGNC	ENSG00000130479	tier1	-	-	58	0	0.00	40	12	23.08
MAP3K10	0	genome.wustl.edu	37	19	40721128	40721128	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	40721128	40721128	C	A	SNP	MAP3K10	ENST00000253055	human	ensembl	74_37	+1	known	missense	c.2794	p.L932M	1.000	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MAP3K10	HGNC	ENSG00000130758	tier1	-	-	26	0	0.00	25	10	28.57
MAT2B	0	genome.wustl.edu	37	5	162940917	162940917	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	162940917	162940917	G	A	SNP	MAT2B	ENST00000321757	human	ensembl	74_37	+1	known	missense	c.443	p.R148K	0.531	pfam_dTDP_dehydrorham_reduct,pfam_Epimerase_deHydtase,pfam_3Beta_OHSteriod_DH/Estase	pfam_dTDP_dehydrorham_reduct,pfam_Epimerase_deHydtase,pfam_Polysac_CapD-like,pfam_3Beta_OHSteriod_DH/Estase	-	no_errors	MAT2B	HGNC	ENSG00000038274	tier1	-	-	39	0	0.00	13	6	31.58
MCHR1	0	genome.wustl.edu	37	22	41077867	41077867	+	Nonsense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	22	41077867	41077867	C	T	SNP	MCHR1	ENST00000249016	human	ensembl	74_37	+1	known	nonsense	c.1204	p.Q402*	1.000	prints_MCH1_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_MCH1_rcpt,prints_MCH_rcpt,prints_GPCR_Rhodpsn	-	no_errors	MCHR1	HGNC	ENSG00000128285				19	0	0.00	30	3	9.09
MFSD12	0	genome.wustl.edu	37	19	3547313	3547313	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	3547313	3547313	G	T	SNP	MFSD12	ENST00000398558	human	ensembl	74_37	-1	known	missense	c.980	p.S327Y	1.000	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	MFSD12	HGNC	ENSG00000161091	tier1	-	-	63	0	0.00	48	7	12.73
MID2	0	genome.wustl.edu	37	X	107148759	107148759	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	X	107148759	107148759	C	A	SNP	MID2	ENST00000262843	human	ensembl	74_37	+1	known	missense	c.976	p.L326I	1.000	smart_Bbox_C	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_Znf_RING,smart_Znf_B-box,smart_Bbox_C,smart_Fibronectin_type3,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	MID2	HGNC	ENSG00000080561				31	0	0.00	48	3	5.88
MT-RNR2	0	genome.wustl.edu	37	MT	3019	3019	+	RNA	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	MT	3019	3019	G	A	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR2	HGNC	ENSG00000210082	tier1	-	-	35	0	0.00	28	26	48.15
MT-TC	0	genome.wustl.edu	37	MT	5791	5791	+	RNA	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	MT	5791	5791	G	A	SNP	MT-TC	ENST00000387405	human	ensembl	74_37	-1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-TC	HGNC	ENSG00000210140	tier1	-	-	129	0	0.00	66	170	72.03
MTTP	0	genome.wustl.edu	37	4	100521876	100521876	+	Silent	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	4	100521876	100521876	C	T	SNP	MTTP	ENST00000265517	human	ensembl	74_37	+1	known	silent	c.1222	p.L408	1.000	pfam_Lipid_transpt_N,superfamily_Vitellinogen_superhlx,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	pfam_Lipid_transpt_N,superfamily_Vitellinogen_superhlx,superfamily_Lipid_transp_b-sht_shell,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	MTTP	HGNC	ENSG00000138823	tier1	-	-	43	0	0.00	32	8	20.00
MTTP	0	genome.wustl.edu	37	4	100521881	100521881	+	Missense_Mutation	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	4	100521881	100521881	A	C	SNP	MTTP	ENST00000265517	human	ensembl	74_37	+1	known	missense	c.1227	p.R409S	0.954	pfam_Lipid_transpt_N,superfamily_Vitellinogen_superhlx,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	pfam_Lipid_transpt_N,superfamily_Vitellinogen_superhlx,superfamily_Lipid_transp_b-sht_shell,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	MTTP	HGNC	ENSG00000138823	tier1	-	-	41	0	0.00	33	8	19.51
MUC16	0	genome.wustl.edu	37	19	9090305	9090305	+	Frame_Shift_Del	DEL	C	C	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	9090305	9090305	C	-	DEL	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	frame_shift_del	c.1510	p.D504fs	0.006	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1			66	0	0.00	42	11	20.75
MUC17	0	genome.wustl.edu	37	7	100677376	100677376	+	Silent	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	7	100677376	100677376	C	T	SNP	MUC17	ENST00000306151	human	ensembl	74_37	+1	known	silent	c.2679	p.S893	0.003	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	MUC17	HGNC	ENSG00000169876	tier1	-	-	87	0	0.00	71	8	10.13
MYH11	0	genome.wustl.edu	37	16	15844130	15844130	+	Silent	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	16	15844130	15844130	G	A	SNP	MYH11	ENST00000396324	human	ensembl	74_37	-1	known	silent	c.1944	p.S648	0.670	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH11	HGNC	ENSG00000133392				37	0	0.00	36	2	5.26
MYH2	0	genome.wustl.edu	37	17	10427169	10427169	+	Silent	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	17	10427169	10427169	C	A	SNP	MYH2	ENST00000245503	human	ensembl	74_37	-1	known	silent	c.5208	p.L1736	1.000	pfam_Myosin_tail	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_Ribosomal_L29,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH2	HGNC	ENSG00000125414	tier1	-	-	75	0	0.00	35	11	23.91
MYH6	0	genome.wustl.edu	37	14	23865919	23865919	+	Missense_Mutation	SNP	T	T	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	14	23865919	23865919	T	G	SNP	MYH6	ENST00000356287	human	ensembl	74_37	-1	known	missense	c.2276	p.K759T	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH6	HGNC	ENSG00000197616	tier1	-	-	41	0	0.00	40	13	24.53
MYOCD	0	genome.wustl.edu	37	17	12647692	12647694	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	17	12647692	12647694	CAG	-	DEL	MYOCD	ENST00000425538	human	ensembl	74_37	+1	known	in_frame_del	c.910_912	p.Q307in_frame_del	1.000:1.000:1.000	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MYOCD	HGNC	ENSG00000141052	tier1			37	0	0.00	18	3	14.29
NAGK	0	genome.wustl.edu	37	2	71305470	71305470	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	71305470	71305470	G	T	SNP	NAGK	ENST00000418807	human	ensembl	74_37	+1	putative	missense	c.714	p.Q238H	0.627	NULL	pfam_ATPase_BadF	-	no_errors	NAGK	HGNC	ENSG00000124357	tier1	-	-	64	0	0.00	67	4	5.63
NCOA1	0	genome.wustl.edu	37	2	24914428	24914428	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	24914428	24914428	C	A	SNP	NCOA1	ENST00000348332	human	ensembl	74_37	+1	known	missense	c.611	p.P204Q	1.000	pirsf_Nuclear_rcpt_coactivator	pfam_DUF1518,pfam_SRC-1,pfam_Nuc_rcpt_coact_Ncoa-typ,pfam_PAS_fold,superfamily_PAS,superfamily_Nuc_rcpt_coact,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,pirsf_Nuclear_rcpt_coactivator,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	NCOA1	HGNC	ENSG00000084676				29	0	0.00	56	3	5.08
NDUFA4	0	genome.wustl.edu	37	7	10973276	10973276	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	7	10973276	10973276	C	T	SNP	NDUFA4	ENST00000339600	human	ensembl	74_37	-1	known	missense	c.233	p.R78H	1.000	NULL	NULL	-	no_errors	NDUFA4	HGNC	ENSG00000189043	tier1	-	-	40	0	0.00	31	9	22.50
NDUFV2	0	genome.wustl.edu	37	18	9122614	9122614	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	18	9122614	9122614	G	T	SNP	NDUFV2	ENST00000318388	human	ensembl	74_37	+1	known	missense	c.404	p.C135F	1.000	pfam_NuoE_like,superfamily_Thioredoxin-like_fold,tigrfam_NuoE_like	pfam_NuoE_like,superfamily_Thioredoxin-like_fold,tigrfam_NuoE_like	-	no_errors	NDUFV2	HGNC	ENSG00000178127				81	0	0.00	76	4	5.00
NFAT5	0	genome.wustl.edu	37	16	69681398	69681398	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	16	69681398	69681398	G	T	SNP	NFAT5	ENST00000432919	human	ensembl	74_37	+1	known	missense	c.721	p.D241Y	1.000	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFAT5	HGNC	ENSG00000102908				34	0	0.00	16	2	11.11
NLRP8	0	genome.wustl.edu	37	19	56466078	56466078	+	Silent	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	56466078	56466078	C	A	SNP	NLRP8	ENST00000291971	human	ensembl	74_37	+1	known	silent	c.654	p.I218	0.233	superfamily_P-loop_NTPase,pfscan_NACHT_NTPase	pfam_DAPIN,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_DAPIN	-	no_errors	NLRP8	HGNC	ENSG00000179709	tier1	-	-	51	0	0.00	39	8	17.02
NOMO1	0	genome.wustl.edu	37	16	14972668	14972668	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	16	14972668	14972668	G	A	SNP	NOMO1	ENST00000287667	human	ensembl	74_37	+1	known	missense	c.2734	p.G912S	1.000	superfamily_Carb-bd-like_fold	pfam_DUF2012,superfamily_CarboxyPept-like_regulatory,superfamily_Carb-bd-like_fold,superfamily_Collagen-bd_Cna_B-typ_dom	-	no_errors	NOMO1	HGNC	ENSG00000103512	tier1	-	-	217	0	0.00	179	29	13.94
NPBWR2	0	genome.wustl.edu	37	20	62737466	62737466	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	20	62737466	62737466	C	T	SNP	NPBWR2	ENST00000369768	human	ensembl	74_37	-1	known	missense	c.719	p.R240Q	0.363	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Neuropept_B/W_rcpt,prints_Somatstn_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Neuropept_B/W_rcpt,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Opioid_rcpt,prints_NPY_rcpt	-	no_errors	NPBWR2	HGNC	ENSG00000125522	tier1	rs139565347	-	20	0	0.00	18	5	21.74
NRG3	0	genome.wustl.edu	37	10	84718755	84718755	+	Missense_Mutation	SNP	A	A	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	10	84718755	84718755	A	G	SNP	NRG3	ENST00000404547	human	ensembl	74_37	+1	known	missense	c.1208	p.K403R	1.000	NULL	pfscan_EG-like_dom	-	no_errors	NRG3	HGNC	ENSG00000185737				40	0	0.00	23	3	11.54
NT5DC2	0	genome.wustl.edu	37	3	52563311	52563311	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	3	52563311	52563311	G	A	SNP	NT5DC2	ENST00000422318	human	ensembl	74_37	-1	known	missense	c.272	p.A91V	0.663	superfamily_HAD-like_dom,pirsf_Pur_nucleotidase	pfam_HAD-SF_hydro_IG_5-nucl,superfamily_HAD-like_dom,pirsf_Pur_nucleotidase,tigrfam_HAD-SF_hydro_IG_5-nucl	-	no_errors	NT5DC2	HGNC	ENSG00000168268	tier1	-	-	65	0	0.00	54	4	6.90
NUFIP1	0	genome.wustl.edu	37	13	45523878	45523878	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	13	45523878	45523878	C	A	SNP	NUFIP1	ENST00000379161	human	ensembl	74_37	-1	known	missense	c.1117	p.G373W	0.991	NULL	pfam_NUFIP1_cons_dom,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	NUFIP1	HGNC	ENSG00000083635	tier1	-	-	85	0	0.00	74	4	5.13
ONECUT2	0	genome.wustl.edu	37	18	55143876	55143876	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	18	55143876	55143876	G	A	SNP	ONECUT2	ENST00000491143	human	ensembl	74_37	+1	known	missense	c.1436	p.R479H	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	ONECUT2	HGNC	ENSG00000119547	tier1	-	-	40	0	0.00	16	10	38.46
OR11H12	0	genome.wustl.edu	37	14	19377837	19377837	+	Missense_Mutation	SNP	T	T	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	14	19377837	19377837	T	A	SNP	OR11H12	ENST00000550708	human	ensembl	74_37	+1	known	missense	c.244	p.S82T	0.273	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR11H12	HGNC	ENSG00000257115				61	0	0.00	71	5	6.58
OR1I1	0	genome.wustl.edu	37	19	15198107	15198107	+	Silent	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	15198107	15198107	C	T	SNP	OR1I1	ENST00000209540	human	ensembl	74_37	+1	known	silent	c.231	p.T77	0.895	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1I1	HGNC	ENSG00000094661				36	0	0.00	38	2	5.00
OR2AJ1	0	genome.wustl.edu	37	1	248097885	248097885	+	Missense_Mutation	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	248097885	248097885	A	C	SNP	OR2AJ1	ENST00000318244	human	ensembl	74_37	+1	known	missense	c.815	p.K272T	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2AJ1	HGNC	ENSG00000177275	tier1	-	-	35	0	0.00	60	12	16.67
OR2L2	0	genome.wustl.edu	37	1	248202030	248202030	+	Missense_Mutation	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	248202030	248202030	A	C	SNP	OR2L2	ENST00000366479	human	ensembl	74_37	+1	known	missense	c.461	p.N154T	0.049	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2L2	HGNC	ENSG00000203663	tier1	-	-	105	0	0.00	170	13	7.10
OR56B1	0	genome.wustl.edu	37	11	5758475	5758475	+	Silent	SNP	A	A	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	11	5758475	5758475	A	T	SNP	OR56B1	ENST00000317121	human	ensembl	74_37	+1	known	silent	c.729	p.A243	0.021	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR56B1	HGNC	ENSG00000181023	tier1	-	-	61	0	0.00	43	6	12.24
OR6A2	0	genome.wustl.edu	37	11	6815962	6815962	+	Silent	SNP	A	A	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	11	6815962	6815962	A	G	SNP	OR6A2	ENST00000332601	human	ensembl	74_37	-1	known	silent	c.978	p.N326	0.001	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6A2	HGNC	ENSG00000184933	tier1	-	-	88	0	0.00	61	13	17.57
PAPPA	0	genome.wustl.edu	37	9	119109489	119109489	+	Splice_Site	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	9	119109489	119109489	G	A	SNP	PAPPA	ENST00000328252	human	ensembl	74_37	+1	known	splice_site	c.3964+1	e15+1	1.000	-	-	-	no_errors	PAPPA	HGNC	ENSG00000182752				29	0	0.00	30	2	6.25
PATE1	0	genome.wustl.edu	37	11	125616207	125616207	+	Missense_Mutation	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	11	125616207	125616207	A	C	SNP	PATE1	ENST00000305738	human	ensembl	74_37	+1	known	missense	c.8	p.K3T	0.007	NULL	NULL	-	no_errors	PATE1	HGNC	ENSG00000171053	tier1	-	-	39	0	0.00	32	12	27.27
PBLD	0	genome.wustl.edu	37	10	70043993	70043993	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	10	70043993	70043993	C	T	SNP	PBLD	ENST00000309049	human	ensembl	74_37	-1	known	missense	c.808	p.G270R	0.569	pfam_Phenazine_PhzF,pirsf_Phenazine_PhzF	pfam_Phenazine_PhzF,pirsf_Phenazine_PhzF,tigrfam_Phenazine_PhzF	-	no_errors	PBLD	HGNC	ENSG00000108187				35	0	0.00	38	2	5.00
PCDHA4	0	genome.wustl.edu	37	5	140186794	140186794	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	140186794	140186794	G	A	SNP	PCDHA4	ENST00000530339	human	ensembl	74_37	+1	known	missense	c.22	p.G8S	0.020	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,prints_Cadherin,pfscan_Cadherin	-	no_errors	PCDHA4	HGNC	ENSG00000204967	tier1	-	-	48	0	0.00	31	5	13.89
PCDHB4	0	genome.wustl.edu	37	5	140502955	140502955	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	140502955	140502955	G	A	SNP	PCDHB4	ENST00000194152	human	ensembl	74_37	+1	known	missense	c.1375	p.V459I	0.039	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB4	HGNC	ENSG00000081818	tier1	rs142630785	-	137	0	0.00	75	19	20.21
PCDHB7	0	genome.wustl.edu	37	5	140554213	140554213	+	Silent	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	140554213	140554213	C	T	SNP	PCDHB7	ENST00000231137	human	ensembl	74_37	+1	known	silent	c.1797	p.N599	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHB7	HGNC	ENSG00000113212	tier1	-	-	174	0	0.00	106	27	20.30
PCDHGA3	0	genome.wustl.edu	37	5	140723816	140723816	+	Silent	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	140723816	140723816	G	A	SNP	PCDHGA3	ENST00000253812	human	ensembl	74_37	+1	known	silent	c.216	p.T72	0.368	pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDHGA3	HGNC	ENSG00000254245	tier1	-	-	47	0	0.00	30	6	16.67
PCGF5	0	genome.wustl.edu	37	10	92982738	92982738	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	10	92982738	92982738	C	T	SNP	PCGF5	ENST00000336126	human	ensembl	74_37	+1	known	missense	c.110	p.T37I	1.000	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PCGF5	HGNC	ENSG00000180628	tier1	-	-	38	0	0.00	41	6	12.77
PEX2	0	genome.wustl.edu	37	8	77895549	77895549	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	77895549	77895549	C	T	SNP	PEX2	ENST00000357039	human	ensembl	74_37	-1	known	missense	c.866	p.S289N	0.792	NULL	pfam_Pex_N,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PEX2	HGNC	ENSG00000164751	tier1	-	-	39	0	0.00	32	21	39.62
PGBD3	0	genome.wustl.edu	37	10	50724765	50724767	+	In_Frame_Del	DEL	TGG	TGG	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	TGG	TGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	10	50724765	50724767	TGG	-	DEL	PGBD3	ENST00000603152	human	ensembl	74_37	-1	known	in_frame_del	c.1800_1798	p.P600in_frame_del	1.000:0.999:0.998	NULL	NULL	-	no_errors	PGBD3	HGNC	ENSG00000243251	tier1			67	0	0.00	57	11	16.18
PI15	0	genome.wustl.edu	37	8	75737501	75737501	+	Missense_Mutation	SNP	C	C	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	75737501	75737501	C	G	SNP	PI15	ENST00000260113	human	ensembl	74_37	+1	known	missense	c.17	p.A6G	0.965	NULL	pfam_CAP_domain,superfamily_CAP_domain,smart_Allrgn_V5/Tpx1,prints_Allrgn_V5/Tpx1	-	no_errors	PI15	HGNC	ENSG00000137558				25	0	0.00	35	2	5.41
PIK3CD	0	genome.wustl.edu	37	1	9783211	9783211	+	Frame_Shift_Del	DEL	G	G	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	9783211	9783211	G	-	DEL	PIK3CD	ENST00000536656	human	ensembl	74_37	+1	known	frame_shift_del	c.2527	p.D844fs	0.999	pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,pfam_PI3K_Ras-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CD	HGNC	ENSG00000171608	tier1			31	0	0.00	30	2	6.25
PJA2	0	genome.wustl.edu	37	5	108704338	108704338	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	108704338	108704338	C	A	SNP	PJA2	ENST00000361189	human	ensembl	74_37	-1	known	missense	c.1393	p.D465Y	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	PJA2	HGNC	ENSG00000198961				42	0	0.00	32	2	5.88
PKDREJ	0	genome.wustl.edu	37	22	46654703	46654703	+	Missense_Mutation	SNP	G	G	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	22	46654703	46654703	G	C	SNP	PKDREJ	ENST00000253255	human	ensembl	74_37	-1	known	missense	c.4517	p.P1506R	0.008	NULL	pfam_PKD1_2_channel,pfam_PKD/REJ-like,pfam_PLAT/LH2_dom,pfam_Ion_trans_dom,superfamily_Lipase_LipOase,smart_GPS_dom,smart_PLAT/LH2_dom,pfscan_PLAT/LH2_dom,pfscan_REJ-like,prints_PKD_2	-	no_errors	PKDREJ	HGNC	ENSG00000130943				58	0	0.00	37	8	17.78
PLD1	0	genome.wustl.edu	37	3	171455451	171455452	+	Splice_Site	INS	-	-	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	3	171455451	171455452	-	A	INS	PLD1	ENST00000351298	human	ensembl	74_37	-1	known	splice_site_ins	c.161-3_161-2	e2-2	0.999:0.901	-	-	-	no_errors	PLD1	HGNC	ENSG00000075651	tier1			20	0	0.00	17	3	15.00
PML	0	genome.wustl.edu	37	15	74335500	74335500	+	Frame_Shift_Del	DEL	C	C	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	15	74335500	74335500	C	-	DEL	PML	ENST00000395135	human	ensembl	74_37	+1	known	frame_shift_del	c.1881	p.H629fs	0.002	NULL	pfam_DUF3583,pfam_Znf_B-box,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	PML	HGNC	ENSG00000140464	tier1			29	0	0.00	19	2	9.52
PNLDC1	0	genome.wustl.edu	37	6	160239687	160239687	+	Splice_Site	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	6	160239687	160239687	G	A	SNP	PNLDC1	ENST00000610273	human	ensembl	74_37	+1	known	splice_site	c.1224+1	e15+1	1.000	-	-	-	no_errors	PNLDC1	HGNC	ENSG00000146453				15	0	0.00	17	4	19.05
POM121L2	0	genome.wustl.edu	37	6	27279511	27279511	+	Frame_Shift_Del	DEL	A	A	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	6	27279511	27279511	A	-	DEL	POM121L2	ENST00000444565	human	ensembl	74_37	-1	known	frame_shift_del	c.439	p.S147fs	0.004	NULL	NULL	-	no_errors	POM121L2	HGNC	ENSG00000158553	tier1			31	0	0.00	28	2	6.67
POTEF	0	genome.wustl.edu	37	2	130832862	130832862	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	130832862	130832862	C	T	SNP	POTEF	ENST00000357462	human	ensembl	74_37	-1	known	missense	c.2183	p.R728Q	1.000	pfam_Actin-related,smart_Actin-related,prints_Actin-related	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	-	no_errors	POTEF	HGNC	ENSG00000196604	tier1	-	-	95	0	0.00	68	19	21.84
PPP2R5C	0	genome.wustl.edu	37	14	102375978	102375978	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	14	102375978	102375978	C	A	SNP	PPP2R5C	ENST00000422945	human	ensembl	74_37	+1	known	missense	c.1297	p.Q433K	1.000	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	pfam_PP2A_B56,superfamily_ARM-type_fold,pirsf_PP2A_B56	-	no_errors	PPP2R5C	HGNC	ENSG00000078304	tier1	-	-	59	0	0.00	58	4	6.35
PRAMEF11	0	genome.wustl.edu	37	1	12887426	12887426	+	Missense_Mutation	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	12887426	12887426	T	C	SNP	PRAMEF11	ENST00000535591	human	ensembl	74_37	-1	known	missense	c.431	p.K144R	0.004	NULL	NULL	-	no_errors	PRAMEF11	HGNC	ENSG00000204513	tier1	-	-	238	0	0.00	170	29	14.57
PRB2	0	genome.wustl.edu	37	12	11546376	11546376	+	Silent	SNP	A	A	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	12	11546376	11546376	A	G	SNP	PRB2	ENST00000389362	human	ensembl	74_37	-1	known	silent	c.636	p.P212	0.021	NULL	NULL	-	no_errors	PRB2	HGNC	ENSG00000121335	tier1	-	-	104	0	0.00	90	22	19.47
PREX2	0	genome.wustl.edu	37	8	69005844	69005844	+	Missense_Mutation	SNP	A	A	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	69005844	69005844	A	G	SNP	PREX2	ENST00000288368	human	ensembl	74_37	+1	known	missense	c.2255	p.D752G	1.000	NULL	pfam_DH-domain,pfam_DEP_dom,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_DH-domain,smart_Pleckstrin_homology,smart_DEP_dom,smart_PDZ,pfscan_DEP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PREX2	HGNC	ENSG00000046889	tier1	-	-	58	0	0.00	77	10	11.49
PRG4	0	genome.wustl.edu	37	1	186275465	186275465	+	Missense_Mutation	SNP	A	A	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	186275465	186275465	A	G	SNP	PRG4	ENST00000445192	human	ensembl	74_37	+1	known	missense	c.614	p.K205R	1.000	NULL	pfam_Somatomedin_B_dom,pfam_Hemopexin-like_repeat,superfamily_Hemopexin-like_dom,smart_Somatomedin_B_dom,smart_Hemopexin-like_repeat,prints_Somatomedin_B_chordata,pfscan_Somatomedin_B_dom	-	no_errors	PRG4	HGNC	ENSG00000116690	tier1	-	-	35	0	0.00	97	10	9.35
PROSER1	0	genome.wustl.edu	37	13	39587523	39587523	+	Silent	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	13	39587523	39587523	T	C	SNP	PROSER1	ENST00000352251	human	ensembl	74_37	-1	known	silent	c.1866	p.P622	0.506	NULL	NULL	-	no_errors	PROSER1	HGNC	ENSG00000120685	tier1	-	-	65	0	0.00	64	12	15.79
PTPN13	0	genome.wustl.edu	37	4	87672182	87672182	+	Nonsense_Mutation	SNP	C	C	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	4	87672182	87672182	C	G	SNP	PTPN13	ENST00000436978	human	ensembl	74_37	+1	known	nonsense	c.3071	p.S1024*	1.000	pirsf_Tyr_Pase_non-rcpt_typ-13	pirsf_Tyr_Pase_non-rcpt_typ-13,pfam_Tyr_Pase_rcpt/non-rcpt,pfam_PDZ,pfam_FERM_central,pfam_FERM_PH-like_C,pfam_FERM_N,superfamily_FERM_central,superfamily_PDZ,superfamily_PAZ_dom,smart_KIND,smart_Band_41_domain,smart_PDZ,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,prints_Band_41_fam,pfscan_FERM_domain,pfscan_PDZ,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPN13	HGNC	ENSG00000163629	tier1	-	-	41	0	0.00	26	8	23.53
PTPRS	0	genome.wustl.edu	37	19	5238931	5238931	+	Frame_Shift_Del	DEL	G	G	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	5238931	5238931	G	-	DEL	PTPRS	ENST00000372412	human	ensembl	74_37	-1	known	frame_shift_del	c.1851	p.K618fs	1.000	superfamily_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom	-	no_errors	PTPRS	HGNC	ENSG00000105426	tier1			11	0	0.00	4	2	33.33
PTPRT	0	genome.wustl.edu	37	20	40944500	40944500	+	Missense_Mutation	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	20	40944500	40944500	A	C	SNP	PTPRT	ENST00000373198	human	ensembl	74_37	-1	known	missense	c.2002	p.L668V	0.707	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRT	HGNC	ENSG00000196090	tier1	-	-	51	0	0.00	33	25	43.10
PTX4	0	genome.wustl.edu	37	16	1537919	1537919	+	Missense_Mutation	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	16	1537919	1537919	T	C	SNP	PTX4	ENST00000447419	human	ensembl	74_37	-1	known	missense	c.194	p.N65S	0.760	NULL	pfam_Pentaxin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	PTX4	HGNC	ENSG00000251692	tier1	-	-	47	0	0.00	20	14	41.18
QTRT1	0	genome.wustl.edu	37	19	10823277	10823277	+	Silent	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	10823277	10823277	C	T	SNP	QTRT1	ENST00000250237	human	ensembl	74_37	+1	known	silent	c.834	p.F278	1.000	pfam_tRNA_ribo_trans-like,superfamily_tRNA_ribo_trans-like,tigrfam_Queuine_tRNA-ribosylTrfase,tigrfam_tRNA_ribo_trans-like	pfam_tRNA_ribo_trans-like,superfamily_tRNA_ribo_trans-like,tigrfam_Queuine_tRNA-ribosylTrfase,tigrfam_tRNA_ribo_trans-like	-	no_errors	QTRT1	HGNC	ENSG00000213339	tier1	-	-	40	0	0.00	20	12	37.50
RABGAP1	0	genome.wustl.edu	37	9	125752361	125752361	+	Silent	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	9	125752361	125752361	C	T	SNP	RABGAP1	ENST00000373647	human	ensembl	74_37	+1	known	silent	c.792	p.A264	1.000	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_Rab-GTPase-TBC_dom,pfam_Kinesin-like,pfam_PTB/PI_dom,superfamily_Rab-GTPase-TBC_dom,smart_PTB/PI_dom,smart_Rab-GTPase-TBC_dom,pfscan_PTB/PI_dom,pfscan_Rab-GTPase-TBC_dom	-	no_errors	RABGAP1	HGNC	ENSG00000011454				41	0	0.00	32	3	8.57
RELN	0	genome.wustl.edu	37	7	103243923	103243923	+	Missense_Mutation	SNP	T	T	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	7	103243923	103243923	T	C	SNP	RELN	ENST00000424685	human	ensembl	74_37	-1	known	missense	c.3161	p.Y1054C	0.998	pfam_EGF_extracell,superfamily_Growth_fac_rcpt_N_dom,superfamily_Sialidases,smart_EG-like_dom	pfam_EGF_extracell,pfam_Reeler_dom,pfam_BNR_rpt,superfamily_Sialidases,superfamily_Growth_fac_rcpt_N_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Reeler_dom	-	no_errors	RELN	HGNC	ENSG00000189056	tier1	-	-	43	0	0.00	36	13	26.53
RGS12	0	genome.wustl.edu	37	4	3319104	3319104	+	Missense_Mutation	SNP	C	C	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	4	3319104	3319104	C	G	SNP	RGS12	ENST00000344733	human	ensembl	74_37	+1	known	missense	c.1207	p.R403G	1.000	NULL	pfam_Raf-like_ras-bd,pfam_RGS_dom,pfam_PDZ,pfam_GoLoco_motif,superfamily_Regulat_G_prot_signal_superfam,superfamily_PDZ,smart_PDZ,smart_PTB/PI_dom,smart_Regulat_G_prot_signal_superfam,smart_Raf-like_ras-bd,smart_GoLoco_motif,pfscan_GoLoco_motif,pfscan_PDZ,pfscan_PTB/PI_dom,pfscan_Raf-like_ras-bd,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS12	HGNC	ENSG00000159788				33	0	0.00	40	4	9.09
RIMS2	0	genome.wustl.edu	37	8	105257145	105257145	+	Missense_Mutation	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	105257145	105257145	A	C	SNP	RIMS2	ENST00000406091	human	ensembl	74_37	+1	known	missense	c.3336	p.K1112N	1.000	NULL	pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_Znf_FYVE_PHD,superfamily_PDZ,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ,pfscan_Znf_FYVE-typ,pfscan_Znf_FYVE-rel	-	no_errors	RIMS2	HGNC	ENSG00000176406				18	0	0.00	19	2	9.52
RP1	0	genome.wustl.edu	37	8	55533956	55533956	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	55533956	55533956	G	T	SNP	RP1	ENST00000220676	human	ensembl	74_37	+1	known	missense	c.430	p.V144F	0.008	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237				26	0	0.00	34	3	7.89
RSPH6A	0	genome.wustl.edu	37	19	46305522	46305522	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	46305522	46305522	C	A	SNP	RSPH6A	ENST00000221538	human	ensembl	74_37	-1	known	missense	c.1654	p.G552C	1.000	pfam_Radial_spoke	pfam_Radial_spoke	-	no_errors	RSPH6A	HGNC	ENSG00000104941				30	0	0.00	18	4	18.18
SACS	0	genome.wustl.edu	37	13	23910865	23910865	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	13	23910865	23910865	C	T	SNP	SACS	ENST00000382292	human	ensembl	74_37	-1	known	missense	c.7150	p.E2384K	1.000	NULL	pfam_HEPN,pfam_Ubiquitin_dom,superfamily_HATPase_ATP-bd,superfamily_DnaJ_domain,smart_HEPN,pfscan_HEPN,pfscan_DnaJ_domain,pfscan_Ubiquitin_supergroup	-	no_errors	SACS	HGNC	ENSG00000151835				37	0	0.00	40	3	6.98
SARS	0	genome.wustl.edu	37	1	109773544	109773544	+	Silent	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	109773544	109773544	C	T	SNP	SARS	ENST00000369923	human	ensembl	74_37	+1	known	silent	c.492	p.V164	0.996	pirsf_Ser-tRNA-ligase_type_1,tigrfam_Ser-tRNA-ligase_type_1	pfam_aa-tRNA-synt_IIb_cons-dom,pfam_Ser-tRNA-synth_1_N,superfamily_tRNA-bd_arm,pirsf_Ser-tRNA-ligase_type_1,pfscan_aa-tRNA-synth_II,prints_Ser-tRNA-ligase_type_1,tigrfam_Ser-tRNA-ligase_type_1	-	no_errors	SARS	HGNC	ENSG00000031698	tier1	-	-	96	0	0.00	80	16	16.67
SATB2	0	genome.wustl.edu	37	2	200245168	200245168	+	Missense_Mutation	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	200245168	200245168	A	C	SNP	SATB2	ENST00000260926	human	ensembl	74_37	-1	known	missense	c.516	p.H172Q	0.929	superfamily_Lambda_DNA-bd_dom	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	SATB2	HGNC	ENSG00000119042	tier1	-	-	61	0	0.00	43	54	55.67
SBF1	0	genome.wustl.edu	37	22	50893823	50893823	+	Nonsense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	22	50893823	50893823	G	A	SNP	SBF1	ENST00000380817	human	ensembl	74_37	-1	known	nonsense	c.4384	p.Q1462*	1.000	NULL	pfam_SBF2,pfam_DENN_dom,pfam_uDENN_dom,pfam_Myotubularin-like_Pase_dom,pfam_dDENN_dom,pfam_GRAM,pfam_Pleckstrin_homology,smart_uDENN_dom,smart_DENN_dom,smart_dDENN_dom,smart_GRAM,smart_Pleckstrin_homology,pfscan_DENN_dom,pfscan_uDENN_dom,pfscan_dDENN_dom,pfscan_Pleckstrin_homology	-	no_errors	SBF1	HGNC	ENSG00000100241				88	0	0.00	59	4	6.35
SCGB1A1	0	genome.wustl.edu	37	11	62190554	62190554	+	Silent	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	11	62190554	62190554	G	A	SNP	SCGB1A1	ENST00000278282	human	ensembl	74_37	+1	known	silent	c.267	p.L89	0.264	pfam_Secretoglobin,superfamily_Secretoglobin,smart_Secretoglobin,prints_Uteroglobin	pfam_Secretoglobin,superfamily_Secretoglobin,smart_Secretoglobin,prints_Uteroglobin	-	no_errors	SCGB1A1	HGNC	ENSG00000149021				60	0	0.00	32	3	8.57
SCN9A	0	genome.wustl.edu	37	2	167089906	167089906	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	167089906	167089906	G	A	SNP	SCN9A	ENST00000303354	human	ensembl	74_37	-1	known	missense	c.3871	p.R1291W	0.996	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,smart_IQ_motif_EF-hand-BS,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN9A	HGNC	ENSG00000169432	tier1	-	-	75	0	0.00	68	12	14.81
SEMA3G	0	genome.wustl.edu	37	3	52478966	52478966	+	Frame_Shift_Del	DEL	G	G	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	3	52478966	52478966	G	-	DEL	SEMA3G	ENST00000231721	human	ensembl	74_37	-1	known	frame_shift_del	c.78	p.G27fs	0.000	NULL	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3G	HGNC	ENSG00000010319	tier1			20	0	0.00	24	2	7.69
SETX	0	genome.wustl.edu	37	9	135203054	135203054	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	9	135203054	135203054	G	A	SNP	SETX	ENST00000372169	human	ensembl	74_37	-1	known	missense	c.3931	p.R1311C	0.990	NULL	superfamily_P-loop_NTPase	-	no_errors	SETX	HGNC	ENSG00000107290	tier1	-	-	55	0	0.00	40	23	36.51
SH2D3C	0	genome.wustl.edu	37	9	130501134	130501134	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	9	130501134	130501134	C	A	SNP	SH2D3C	ENST00000314830	human	ensembl	74_37	-1	known	missense	c.2474	p.G825V	1.000	smart_RasGRF_CDC25,pfscan_RasGRF_CDC25	pfam_SH2,pfam_RasGRF_CDC25,superfamily_Ras_GEF_dom,smart_SH2,smart_RasGRF_CDC25,pfscan_SH2,pfscan_RasGRF_CDC25	-	no_errors	SH2D3C	HGNC	ENSG00000095370	tier1	-	-	29	0	0.00	32	4	11.11
SIAE	0	genome.wustl.edu	37	11	124539377	124539377	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	11	124539377	124539377	C	A	SNP	SIAE	ENST00000263593	human	ensembl	74_37	-1	known	missense	c.108	p.M36I	1.000	NULL	pfam_DUF303_acetylest	-	no_errors	SIAE	HGNC	ENSG00000110013	tier1	-	-	38	0	0.00	28	4	12.50
SIDT1	0	genome.wustl.edu	37	3	113327302	113327302	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	3	113327302	113327302	G	A	SNP	SIDT1	ENST00000393830	human	ensembl	74_37	+1	known	missense	c.1639	p.A547T	1.000	NULL	NULL	-	no_errors	SIDT1	HGNC	ENSG00000072858	tier1	-	-	90	0	0.00	81	18	18.18
SIPA1L3	0	genome.wustl.edu	37	19	38610361	38610361	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	38610361	38610361	C	T	SNP	SIPA1L3	ENST00000222345	human	ensembl	74_37	+1	known	missense	c.2707	p.R903C	0.955	NULL	pfam_DUF3401,pfam_Rap_GAP_dom,superfamily_PDZ,smart_PDZ,pfscan_PDZ,pfscan_Rap_GAP_dom	-	no_errors	SIPA1L3	HGNC	ENSG00000105738	tier1	-	-	81	0	0.00	67	4	5.56
SLA	0	genome.wustl.edu	37	8	134057315	134057315	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	134057315	134057315	C	T	SNP	SLA	ENST00000427060	human	ensembl	74_37	-1	known	missense	c.518	p.R173H	1.000	pfam_SH2,smart_SH2,pfscan_SH2,prints_SH2	pfam_SH2,pfam_SH3_domain,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,pfscan_SH2,pfscan_SH3_domain,prints_SH2	-	no_errors	SLA	HGNC	ENSG00000155926				30	0	0.00	30	2	6.25
SLC12A7	0	genome.wustl.edu	37	5	1078124	1078125	+	Splice_Site	INS	-	-	GCAG			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	1078124	1078125	-	GCAG	INS	SLC12A7	ENST00000264930	human	ensembl	74_37	-1	known	splice_site_ins	c.1455-3_1455-2	e12-2	1.000:0.971	-	-	-	no_errors	SLC12A7	HGNC	ENSG00000113504	tier1			8	0	0.00	4	2	33.33
SLC17A4	0	genome.wustl.edu	37	6	25776845	25776845	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	6	25776845	25776845	C	T	SNP	SLC17A4	ENST00000377905	human	ensembl	74_37	+1	known	missense	c.1010	p.P337L	0.957	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A4	HGNC	ENSG00000146039	tier1	-	-	35	0	0.00	26	8	23.53
SLC22A3	0	genome.wustl.edu	37	6	160829877	160829877	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	6	160829877	160829877	G	A	SNP	SLC22A3	ENST00000392145	human	ensembl	74_37	+1	known	missense	c.781	p.A261T	1.000	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A3	HGNC	ENSG00000146477	tier1	-	-	49	0	0.00	69	4	5.48
SLC6A12	0	genome.wustl.edu	37	12	311938	311938	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	12	311938	311938	G	A	SNP	SLC6A12	ENST00000359674	human	ensembl	74_37	-1	known	missense	c.458	p.P153L	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_betaine	-	no_errors	SLC6A12	HGNC	ENSG00000111181	tier1	-	-	63	0	0.00	44	15	25.42
SLC6A19	0	genome.wustl.edu	37	5	1213683	1213683	+	Missense_Mutation	SNP	C	C	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	1213683	1213683	C	G	SNP	SLC6A19	ENST00000304460	human	ensembl	74_37	+1	known	missense	c.769	p.P257A	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_orphan	-	no_errors	SLC6A19	HGNC	ENSG00000174358	tier1	-	-	72	0	0.00	58	13	18.31
SLC6A3	0	genome.wustl.edu	37	5	1416295	1416295	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	1416295	1416295	G	T	SNP	SLC6A3	ENST00000270349	human	ensembl	74_37	-1	known	missense	c.949	p.Q317K	1.000	pfam_Na/ntran_symport,pfscan_Na/ntran_symport	pfam_Na/ntran_symport,pfscan_Na/ntran_symport,prints_Na/ntran_symport,prints_Na/ntran_symport_dopamine	-	no_errors	SLC6A3	HGNC	ENSG00000142319	tier1	-	-	33	0	0.00	56	4	6.67
SLITRK5	0	genome.wustl.edu	37	13	88327918	88327918	+	Frame_Shift_Del	DEL	T	T	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	13	88327918	88327918	T	-	DEL	SLITRK5	ENST00000325089	human	ensembl	74_37	+1	known	frame_shift_del	c.275	p.L93fs	1.000	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK5	HGNC	ENSG00000165300	tier1			23	0	0.00	34	2	5.56
SNORA72	0	genome.wustl.edu	37	8	99054503	99054504	+	RNA	INS	-	-	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	99054503	99054504	-	T	INS	SNORA72	ENST00000501016	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.001	-	-	-	no_errors	KB-1208A12.3	Clone_based_vega_gene	ENSG00000245970	tier1			41	0	0.00	38	6	13.64
SNTG2	0	genome.wustl.edu	37	2	1371122	1371122	+	Missense_Mutation	SNP	A	A	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	1371122	1371122	A	G	SNP	SNTG2	ENST00000308624	human	ensembl	74_37	+1	known	missense	c.1496	p.E499G	1.000	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SNTG2	HGNC	ENSG00000172554	tier1	-	-	66	0	0.00	51	11	17.74
SRMS	0	genome.wustl.edu	37	20	62172557	62172557	+	Missense_Mutation	SNP	C	C	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	20	62172557	62172557	C	G	SNP	SRMS	ENST00000217188	human	ensembl	74_37	-1	known	missense	c.1272	p.Q424H	1.000	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,superfamily_Kinase-like_dom,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_SH2,pfscan_SH3_domain,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH2	-	no_errors	SRMS	HGNC	ENSG00000125508	tier1	-	-	43	0	0.00	43	9	17.31
SRP68	0	genome.wustl.edu	37	17	74035522	74035522	+	RNA	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	17	74035522	74035522	G	A	SNP	SRP68	ENST00000542536	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SRP68	HGNC	ENSG00000167881	tier1	-	-	24	0	0.00	18	6	25.00
ST6GALNAC3	0	genome.wustl.edu	37	1	76877737	76877737	+	Silent	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	76877737	76877737	A	C	SNP	ST6GALNAC3	ENST00000328299	human	ensembl	74_37	+1	known	silent	c.258	p.S86	0.561	pfam_Glyco_trans_29	pfam_Glyco_trans_29	-	no_errors	ST6GALNAC3	HGNC	ENSG00000184005	tier1	-	-	60	0	0.00	54	7	11.48
STEAP3	0	genome.wustl.edu	37	2	120005349	120005349	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	120005349	120005349	C	T	SNP	STEAP3	ENST00000393110	human	ensembl	74_37	+1	known	missense	c.617	p.A206V	0.009	NULL	pfam_Fe3_Rdtase_TM_dom	-	no_errors	STEAP3	HGNC	ENSG00000115107	tier1	-	-	32	0	0.00	26	7	21.21
SVEP1	0	genome.wustl.edu	37	9	113312185	113312185	+	Missense_Mutation	SNP	T	T	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	9	113312185	113312185	T	G	SNP	SVEP1	ENST00000401783	human	ensembl	74_37	-1	known	missense	c.731	p.Y244S	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_Sushi_SCR_CCP,pfam_EG-like_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_Hyalin,pfam_VWF_A,pfam_Pentaxin,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Sushi_SCR_CCP,superfamily_Growth_fac_rcpt_N_dom,smart_VWF_A,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Pentaxin,pfscan_EG-like_dom,pfscan_Hyalin,pfscan_Sushi_SCR_CCP,pfscan_VWF_A,prints_Pentaxin	-	no_errors	SVEP1	HGNC	ENSG00000165124	tier1	-	-	26	0	0.00	39	10	20.41
SYCP1	0	genome.wustl.edu	37	1	115537600	115537601	+	Frame_Shift_Ins	INS	-	-	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	115537600	115537601	-	A	INS	SYCP1	ENST00000369518	human	ensembl	74_37	+1	known	frame_shift_ins	c.2891_2892	p.K968fs	1.000:1.000	NULL	pfam_SCP-1	-	no_errors	SYCP1	HGNC	ENSG00000198765	tier1			41	0	0.00	39	7	15.22
TAOK3	0	genome.wustl.edu	37	12	118681288	118681288	+	Missense_Mutation	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	12	118681288	118681288	A	C	SNP	TAOK3	ENST00000392533	human	ensembl	74_37	-1	known	missense	c.226	p.L76V	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TAOK3	HGNC	ENSG00000135090	tier1	-	-	102	0	0.00	77	18	18.95
TAT	0	genome.wustl.edu	37	16	71602142	71602142	+	Nonsense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	16	71602142	71602142	C	A	SNP	TAT	ENST00000355962	human	ensembl	74_37	-1	known	nonsense	c.1270	p.E424*	0.605	pfam_Aminotransferase_I/II,superfamily_PyrdxlP-dep_Trfase,pirsf_Tyrosine_transaminase,tigrfam_Tyrosine_aminoTrfase,tigrfam_TyrNic_aminoTrfase	pfam_Aminotransferase_I/II,pfam_Tyr_aminoTrfase_ubiquitination,pfam_ArAA_b-elim_lyase/Thr_aldolase,pfam_Aminotrans_V/Cys_dSase,pfam_DegT/StrS_aminotransferase,superfamily_PyrdxlP-dep_Trfase,pirsf_Tyrosine_transaminase,tigrfam_Tyrosine_aminoTrfase,tigrfam_TyrNic_aminoTrfase	-	no_errors	TAT	HGNC	ENSG00000198650	tier1	-	-	45	0	0.00	18	4	18.18
TBL3	0	genome.wustl.edu	37	16	2024421	2024421	+	Silent	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	16	2024421	2024421	C	T	SNP	TBL3	ENST00000568546	human	ensembl	74_37	+1	known	silent	c.234	p.N78	0.983	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_SSU_processome_Utp13,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TBL3	HGNC	ENSG00000183751	tier1	-	-	58	0	0.00	37	10	21.28
TDH	0	genome.wustl.edu	37	8	11223103	11223103	+	RNA	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	11223103	11223103	C	A	SNP	TDH	ENST00000525246	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TDH	HGNC	ENSG00000154316	tier1	-	-	31	0	0.00	29	11	27.50
TDH	0	genome.wustl.edu	37	8	11219167	11219167	+	RNA	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	11219167	11219167	G	A	SNP	TDH	ENST00000525246	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	TDH	HGNC	ENSG00000154316				77	0	0.00	75	4	5.06
TDRD9	0	genome.wustl.edu	37	14	104497480	104497480	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	14	104497480	104497480	G	T	SNP	TDRD9	ENST00000409874	human	ensembl	74_37	+1	known	missense	c.3318	p.K1106N	0.013	NULL	pfam_Helicase-assoc_dom,pfam_Tudor,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,smart_Tudor,pfscan_Tudor,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	TDRD9	HGNC	ENSG00000156414	tier1	-	-	44	0	0.00	66	4	5.71
TIE1	0	genome.wustl.edu	37	1	43774548	43774548	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	43774548	43774548	G	A	SNP	TIE1	ENST00000538015	human	ensembl	74_37	+1	known	missense	c.1049	p.R350K	0.041	NULL	smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	TIE1	HGNC	ENSG00000066056	tier1	-	-	16	0	0.00	12	4	25.00
TMCC3	0	genome.wustl.edu	37	12	94972297	94972297	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	12	94972297	94972297	C	A	SNP	TMCC3	ENST00000261226	human	ensembl	74_37	-1	known	missense	c.1004	p.R335L	1.000	pfam_Predicted_TM_coiled-coil_2	pfam_Predicted_TM_coiled-coil_2	-	no_errors	TMCC3	HGNC	ENSG00000057704	tier1	-	-	30	0	0.00	17	3	15.00
TMCO3	0	genome.wustl.edu	37	13	114149957	114149957	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	13	114149957	114149957	C	A	SNP	TMCO3	ENST00000434316	human	ensembl	74_37	+1	known	missense	c.61	p.Q21K	0.000	NULL	pfam_Cation/H_exchanger	-	no_errors	TMCO3	HGNC	ENSG00000150403				32	0	0.00	31	2	6.06
TMEM109	0	genome.wustl.edu	37	11	60689319	60689319	+	Silent	SNP	C	C	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	11	60689319	60689319	C	G	SNP	TMEM109	ENST00000227525	human	ensembl	74_37	+1	known	silent	c.414	p.A138	1.000	NULL	NULL	-	no_errors	TMEM109	HGNC	ENSG00000110108	tier1	-	-	142	0	0.00	102	22	17.74
TMEM132D	0	genome.wustl.edu	37	12	129566504	129566504	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	12	129566504	129566504	C	T	SNP	TMEM132D	ENST00000422113	human	ensembl	74_37	-1	known	missense	c.1723	p.A575T	0.999	NULL	NULL	-	no_errors	TMEM132D	HGNC	ENSG00000151952	tier1	-	-	58	0	0.00	33	6	15.38
TMEM8C	0	genome.wustl.edu	37	9	136389832	136389832	+	Silent	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	9	136389832	136389832	C	T	SNP	TMEM8C	ENST00000339996	human	ensembl	74_37	-1	known	silent	c.135	p.A45	1.000	pfam_DUF3522	pfam_DUF3522	-	no_errors	TMEM8C	HGNC	ENSG00000187616	tier1	-	-	45	0	0.00	43	7	14.00
TNFSF12	0	genome.wustl.edu	37	17	7452775	7452775	+	RNA	DEL	C	C	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	17	7452775	7452775	C	-	DEL	TNFSF12	ENST00000462619	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.997	-	-	-	no_errors	TNFSF12	HGNC	ENSG00000239697	tier1			74	0	0.00	55	14	20.29
TNR	0	genome.wustl.edu	37	1	175299280	175299280	+	Silent	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	175299280	175299280	G	A	SNP	TNR	ENST00000263525	human	ensembl	74_37	-1	known	silent	c.3723	p.Y1241	0.983	pfam_Fibrinogen_a/b/g_C_dom,superfamily_Fibrinogen_a/b/g_C_dom,smart_Fibrinogen_a/b/g_C_dom	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNR	HGNC	ENSG00000116147				21	0	0.00	32	4	11.11
TP53	0	genome.wustl.edu	37	17	7577538	7577538	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	17	7577538	7577538	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.743	p.R248Q	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd,prints_p53_tumour_suppressor	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs11540652	-	68	0	0.00	33	23	41.07
TP53I13	0	genome.wustl.edu	37	17	27899268	27899268	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	17	27899268	27899268	C	T	SNP	TP53I13	ENST00000301057	human	ensembl	74_37	+1	known	missense	c.622	p.R208W	0.994	NULL	NULL	-	no_errors	TP53I13	HGNC	ENSG00000167543	tier1	-	-	48	0	0.00	37	4	9.76
TRA2B	0	genome.wustl.edu	37	3	185637260	185637262	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	3	185637260	185637262	TCC	-	DEL	TRA2B	ENST00000453386	human	ensembl	74_37	-1	known	in_frame_del	c.747_745	p.G249in_frame_del	1.000:1.000:1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	TRA2B	HGNC	ENSG00000136527	tier1			60	0	0.00	34	3	8.11
TRAM1L1	0	genome.wustl.edu	37	4	118005745	118005745	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	4	118005745	118005745	C	T	SNP	TRAM1L1	ENST00000310754	human	ensembl	74_37	-1	known	missense	c.805	p.V269I	0.008	pfam_TLC-dom,smart_TLC-dom,pirsf_Translocation_assoc_membrane,pfscan_TLC-dom	pfam_TRAM1,pfam_TLC-dom,smart_TLC-dom,pirsf_Translocation_assoc_membrane,pfscan_TLC-dom	-	no_errors	TRAM1L1	HGNC	ENSG00000174599	tier1	-	-	20	0	0.00	28	5	15.15
TRIM49B	0	genome.wustl.edu	37	11	49059118	49059118	+	Missense_Mutation	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	11	49059118	49059118	A	C	SNP	TRIM49B	ENST00000332682	human	ensembl	74_37	+1	known	missense	c.948	p.Q316H	0.079	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY	pfam_SPRY_rcpt,pfam_Znf_B-box,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM49B	HGNC	ENSG00000182053	tier1	-	-	193	0	0.00	157	37	19.07
TRIM5	0	genome.wustl.edu	37	11	5686747	5686747	+	Missense_Mutation	SNP	G	G	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	11	5686747	5686747	G	T	SNP	TRIM5	ENST00000396847	human	ensembl	74_37	-1	known	missense	c.1034	p.P345H	0.001	NULL	pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,smart_Znf_RING,smart_Znf_B-box,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM5	HGNC	ENSG00000132256	tier1	-	-	55	0	0.00	47	4	7.84
TRIM51	0	genome.wustl.edu	37	11	55657514	55657514	+	Missense_Mutation	SNP	A	A	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	11	55657514	55657514	A	T	SNP	TRIM51	ENST00000449290	human	ensembl	74_37	+1	known	missense	c.858	p.R286S	0.053	superfamily_ConA-like_lec_gl_sf,pfscan_B30.2/SPRY,prints_Butyrophylin	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM51	HGNC	ENSG00000124900	tier1	-	-	93	0	0.00	82	14	14.58
TROVE2	0	genome.wustl.edu	37	1	193053996	193053997	+	RNA	INS	-	-	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	193053996	193053997	-	A	INS	TROVE2	ENST00000460715	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	TROVE2	HGNC	ENSG00000116747	tier1			24	0	0.00	16	4	20.00
TTF1	0	genome.wustl.edu	37	9	135271877	135271877	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	9	135271877	135271877	C	A	SNP	TTF1	ENST00000334270	human	ensembl	74_37	-1	known	missense	c.1799	p.W600L	1.000	NULL	superfamily_Homeodomain-like,smart_SANT/Myb,pfscan_Myb-like_dom	-	no_errors	TTF1	HGNC	ENSG00000125482	tier1	-	-	82	0	0.00	65	4	5.80
UBL4A	0	genome.wustl.edu	37	X	153714147	153714147	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	X	153714147	153714147	G	A	SNP	UBL4A	ENST00000369660	human	ensembl	74_37	-1	known	missense	c.326	p.A109V	0.002	NULL	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	UBL4A	HGNC	ENSG00000102178	tier1	-	-	40	0	0.00	38	4	9.52
UNC80	0	genome.wustl.edu	37	2	210678324	210678324	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	210678324	210678324	C	T	SNP	UNC80	ENST00000439458	human	ensembl	74_37	+1	known	missense	c.959	p.P320L	0.976	NULL	NULL	-	no_errors	UNC80	HGNC	ENSG00000144406	tier1	-	-	52	0	0.00	28	6	17.65
VCAN	0	genome.wustl.edu	37	5	82836373	82836373	+	Silent	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	82836373	82836373	C	T	SNP	VCAN	ENST00000265077	human	ensembl	74_37	+1	known	silent	c.7551	p.D2517	0.246	NULL	pfam_Link,pfam_C-type_lectin,pfam_Ig_V-set,pfam_EG-like_dom,pfam_Sushi_SCR_CCP,superfamily_C-type_lectin_fold,superfamily_Sushi_SCR_CCP,smart_Ig_sub,smart_Link,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_C-type_lectin,smart_Sushi_SCR_CCP,pfscan_EG-like_dom,pfscan_C-type_lectin,pfscan_Link,pfscan_Sushi_SCR_CCP,pfscan_Ig-like_dom,prints_Link	-	no_errors	VCAN	HGNC	ENSG00000038427				21	0	0.00	14	3	17.65
WDR70	0	genome.wustl.edu	37	5	37443453	37443453	+	Missense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	5	37443453	37443453	G	A	SNP	WDR70	ENST00000265107	human	ensembl	74_37	+1	known	missense	c.665	p.R222Q	1.000	superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR70	HGNC	ENSG00000082068				63	0	0.00	55	4	6.78
WNT7B	0	genome.wustl.edu	37	22	46327149	46327149	+	Silent	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	22	46327149	46327149	G	A	SNP	WNT7B	ENST00000339464	human	ensembl	74_37	-1	known	silent	c.399	p.C133	0.994	pfam_Wnt,smart_Wnt,prints_Wnt	pfam_Wnt,smart_Wnt,prints_Wnt,prints_Wnt7	-	no_errors	WNT7B	HGNC	ENSG00000188064	tier1	-	-	45	0	0.00	31	18	36.73
WT1-AS	0	genome.wustl.edu	37	11	32461227	32461227	+	RNA	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	11	32461227	32461227	C	T	SNP	WT1-AS	ENST00000395900	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	WT1-AS	HGNC	ENSG00000183242	tier1	-	-	51	0	0.00	36	9	20.00
WWTR1	0	genome.wustl.edu	37	3	149260151	149260151	+	Nonsense_Mutation	SNP	G	G	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	3	149260151	149260151	G	A	SNP	WWTR1	ENST00000360632	human	ensembl	74_37	-1	known	nonsense	c.742	p.R248*	0.024	NULL	pfam_WW_dom,superfamily_WW_dom,smart_WW_dom,pfscan_WW_dom	-	no_errors	WWTR1	HGNC	ENSG00000018408				70	0	0.00	38	2	5.00
XPR1	0	genome.wustl.edu	37	1	180843176	180843176	+	RNA	SNP	C	C	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	1	180843176	180843176	C	G	SNP	XPR1	ENST00000498177	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	XPR1	HGNC	ENSG00000143324	tier1	-	-	15	0	0.00	7	11	61.11
ZFHX4	0	genome.wustl.edu	37	8	77775556	77775556	+	Missense_Mutation	SNP	C	C	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	8	77775556	77775556	C	G	SNP	ZFHX4	ENST00000521891	human	ensembl	74_37	+1	known	missense	c.9606	p.I3202M	1.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_Znf_C2H2-like,smart_Znf_U1,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Znf_C2H2	-	no_errors	ZFHX4	HGNC	ENSG00000091656	tier1	-	-	26	0	0.00	28	7	20.00
ZIC4	0	genome.wustl.edu	37	3	147108838	147108838	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	3	147108838	147108838	C	T	SNP	ZIC4	ENST00000525172	human	ensembl	74_37	-1	known	missense	c.1034	p.S345N	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC4	HGNC	ENSG00000174963	tier1	-	-	56	0	0.00	62	5	7.46
ZNF107	0	genome.wustl.edu	37	7	64167902	64167902	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	7	64167902	64167902	C	A	SNP	ZNF107	ENST00000344930	human	ensembl	74_37	+1	known	missense	c.1220	p.S407Y	1.000	pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF107	HGNC	ENSG00000196247				37	0	0.00	30	2	6.25
ZNF385D	0	genome.wustl.edu	37	3	21467136	21467136	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	3	21467136	21467136	C	A	SNP	ZNF385D	ENST00000281523	human	ensembl	74_37	-1	known	missense	c.700	p.A234S	1.000	smart_Znf_U1	pfam_Znf_C2H2_jaz,smart_Znf_U1,smart_Znf_C2H2-like	-	no_errors	ZNF385D	HGNC	ENSG00000151789	tier1	-	-	58	0	0.00	43	9	17.31
ZNF507	0	genome.wustl.edu	37	19	32845530	32845530	+	Silent	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	32845530	32845530	A	C	SNP	ZNF507	ENST00000311921	human	ensembl	74_37	+1	known	silent	c.1794	p.T598	0.997	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF507	HGNC	ENSG00000168813	tier1	-	-	16	0	0.00	19	5	20.83
ZNF513	0	genome.wustl.edu	37	2	27600837	27600837	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	2	27600837	27600837	C	T	SNP	ZNF513	ENST00000323703	human	ensembl	74_37	-1	known	missense	c.1201	p.D401N	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF513	HGNC	ENSG00000163795				53	0	0.00	45	3	6.25
ZNF521	0	genome.wustl.edu	37	18	22805855	22805855	+	Missense_Mutation	SNP	T	T	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	18	22805855	22805855	T	A	SNP	ZNF521	ENST00000361524	human	ensembl	74_37	-1	known	missense	c.2027	p.Q676L	0.999	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF521	HGNC	ENSG00000198795	tier1	-	-	13	0	0.00	11	4	26.67
ZNF585B	0	genome.wustl.edu	37	19	37676372	37676372	+	Silent	SNP	A	A	C			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	37676372	37676372	A	C	SNP	ZNF585B	ENST00000532828	human	ensembl	74_37	-1	known	silent	c.2067	p.P689	0.035	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF585B	HGNC	ENSG00000245680				49	0	0.00	38	9	19.15
ZNF721	0	genome.wustl.edu	37	4	436778	436778	+	Missense_Mutation	SNP	C	C	G			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	4	436778	436778	C	G	SNP	ZNF721	ENST00000511833	human	ensembl	74_37	-1	known	missense	c.1478	p.R493T	0.180	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF721	HGNC	ENSG00000182903	tier1	-	-	74	0	0.00	74	20	21.28
ZNF750	0	genome.wustl.edu	37	17	80789208	80789208	+	Missense_Mutation	SNP	C	C	T			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	17	80789208	80789208	C	T	SNP	ZNF750	ENST00000269394	human	ensembl	74_37	-1	known	missense	c.1123	p.V375I	0.000	NULL	NULL	-	no_errors	ZNF750	HGNC	ENSG00000141579	tier1	-	-	44	0	0.00	31	7	18.42
ZNF844	0	genome.wustl.edu	37	19	12186633	12186633	+	Missense_Mutation	SNP	C	C	A			TCGA-S8-A6BV-01A-21D-A31U-09	TCGA-S8-A6BV-10A-01D-A31U-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	68330017-cad8-4064-86c3-f414b8a9abf2	4f02c2c2-9922-41d1-9709-a96b47bf869f	19	12186633	12186633	C	A	SNP	ZNF844	ENST00000439326	human	ensembl	74_37	+1	known	missense	c.698	p.A233D	0.004	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF844	HGNC	ENSG00000223547	tier1	-	-	62	0	0.00	60	5	7.69
