Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AARS2	0	genome.wustl.edu	37	6	44272859	44272859	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	44272859	44272859	C	T	SNP	AARS2	ENST00000244571	human	ensembl	74_37	-1	known	missense	c.1511	p.R504H	0.015	pfam_Ala-tRNA-synth_IIc_N,superfamily_Ala-tRNA-ligase_IIc_anticod-bd,pfscan_Ala-tRNA-synth_IIc_core,tigrfam_Ala-tRNA-lgiase_IIc	pfam_Ala-tRNA-synth_IIc_N,pfam_tRNA_SAD,superfamily_Ala-tRNA-ligase_IIc_anticod-bd,superfamily_Thr/Ala-tRNA-synth_IIc_edit,smart_tRNA_SAD,prints_Ala-tRNA-lgiase_IIc,pfscan_Ala-tRNA-synth_IIc_core,tigrfam_Ala-tRNA-lgiase_IIc	-	no_errors	AARS2	HGNC	ENSG00000124608				39	0	0.00	38	4	9.52
ABCC2	0	genome.wustl.edu	37	10	101560169	101560169	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	10	101560169	101560169	G	T	SNP	ABCC2	ENST00000370449	human	ensembl	74_37	+1	known	missense	c.1058	p.R353L	0.000	pfam_ABC_transptr_TM_dom,superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_ABC1_TM_dom,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom,tigrfam_Multidrug-R_assoc	-	no_errors	ABCC2	HGNC	ENSG00000023839	tier1	-	-	61	0	0.00	65	4	5.80
ADCK4	0	genome.wustl.edu	37	19	41209522	41209522	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	41209522	41209522	G	A	SNP	ADCK4	ENST00000599643	human	ensembl	74_37	-1	known	missense	c.341	p.P114L	0.753	NULL	NULL	-	no_errors	ADCK4	HGNC	ENSG00000123815	tier1	-	-	19	0	0.00	26	12	31.58
AFF1	0	genome.wustl.edu	37	4	88029432	88029432	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	4	88029432	88029432	G	A	SNP	AFF1	ENST00000395146	human	ensembl	74_37	+1	known	missense	c.1498	p.E500K	1.000	pfam_TF_AF4/FMR2	pfam_TF_AF4/FMR2	-	no_errors	AFF1	HGNC	ENSG00000172493	tier1	-	-	57	0	0.00	44	20	31.25
AJAP1	0	genome.wustl.edu	37	1	4772583	4772585	+	In_Frame_Del	DEL	CCA	CCA	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	CCA	CCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	4772583	4772585	CCA	0	DEL	AJAP1	ENST00000378190	human	ensembl	74_37	+1	known	in_frame_del	c.653_655	p.T222in_frame_del	0.919:0.855:0.873	NULL	NULL	-	no_errors	AJAP1	HGNC	ENSG00000196581				79	0	0.00	71	4	5.33
ALG13	0	genome.wustl.edu	37	X	110988002	110988002	+	Silent	SNP	T	T	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	X	110988002	110988002	T	A	SNP	ALG13	ENST00000394780	human	ensembl	74_37	+1	putative	silent	c.2802	p.P934	0.000	NULL	pfam_Glyco_trans_28_C,pfam_OTU,pfscan_OTU,pfscan_Tudor	-	no_errors	ALG13	HGNC	ENSG00000101901				14	0	0.00	18	4	18.18
ANKFN1	0	genome.wustl.edu	37	17	54576434	54576434	+	Silent	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	17	54576434	54576434	G	A	SNP	ANKFN1	ENST00000566473	human	ensembl	74_37	+1	novel	silent	c.2628	p.E876	0.968	NULL	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Fibronectin_type3,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Fibronectin_type3	-	no_errors	ANKFN1	HGNC	ENSG00000153930	tier1	-	-	48	0	0.00	48	14	22.58
ANKS1A	0	genome.wustl.edu	37	6	35050978	35050978	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	35050978	35050978	C	T	SNP	ANKS1A	ENST00000360359	human	ensembl	74_37	+1	known	missense	c.2882	p.T961M	1.000	pfam_PTB/PI_dom,smart_PTB/PI_dom,pfscan_PTB/PI_dom	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_PTB/PI_dom,pfam_SAM_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SAM,smart_PTB/PI_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PTB/PI_dom,pfscan_SAM,prints_Ankyrin_rpt	-	no_errors	ANKS1A	HGNC	ENSG00000064999				26	0	0.00	32	2	5.88
ANO4	0	genome.wustl.edu	37	12	101188779	101188781	+	RNA	DEL	CTT	CTT	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	12	101188779	101188781	CTT	-	DEL	ANO4	ENST00000551148	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.788:0.913:0.909	-	-	-	no_errors	ANO4	HGNC	ENSG00000151572	tier1			78	0	0.00	41	18	30.51
ARFGEF1	0	genome.wustl.edu	37	8	68111035	68111035	+	RNA	SNP	G	G	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	8	68111035	68111035	G	C	SNP	ARFGEF1	ENST00000517955	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	ARFGEF1	HGNC	ENSG00000066777	tier1	-	-	64	0	0.00	65	20	23.53
ARSJ	0	genome.wustl.edu	37	4	114823764	114823764	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	4	114823764	114823764	G	T	SNP	ARSJ	ENST00000315366	human	ensembl	74_37	-1	known	missense	c.1466	p.T489N	0.048	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ARSJ	HGNC	ENSG00000180801				73	0	0.00	66	4	5.71
ASB16-AS1	0	genome.wustl.edu	37	17	42254032	42254032	+	RNA	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	17	42254032	42254032	G	T	SNP	ASB16-AS1	ENST00000585457	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	ASB16-AS1	HGNC	ENSG00000267080				53	0	0.00	66	4	5.71
ASB8	0	genome.wustl.edu	37	12	48543170	48543173	+	Frame_Shift_Del	DEL	TTCC	TTCC	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	TTCC	TTCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	12	48543170	48543173	TTCC	-	DEL	ASB8	ENST00000317697	human	ensembl	74_37	-1	known	frame_shift_del	c.846_843	p.K281fs	0.993:1.000:1.000:0.999	pfam_SOCS_C,smart_SOCS_C,pfscan_SOCS_C	pfam_Ankyrin_rpt,pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_SOCS_C,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SOCS_C	-	no_errors	ASB8	HGNC	ENSG00000177981	tier1			37	0	0.00	21	10	32.26
ASXL1	0	genome.wustl.edu	37	20	31022592	31022592	+	Nonsense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	20	31022592	31022592	C	T	SNP	ASXL1	ENST00000375687	human	ensembl	74_37	+1	known	nonsense	c.2077	p.R693*	1.000	NULL	NULL	-	no_errors	ASXL1	HGNC	ENSG00000171456	tier1	-	-	62	0	0.00	56	38	40.43
ATRN	0	genome.wustl.edu	37	20	3564710	3564710	+	Missense_Mutation	SNP	A	A	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	20	3564710	3564710	A	G	SNP	ATRN	ENST00000262919	human	ensembl	74_37	+1	known	missense	c.2930	p.Y977C	1.000	pfam_Plexin_repeat,smart_Plexin-like_fold	pfam_Kelch_1,pfam_Plexin_repeat,pfam_CUB_dom,superfamily_C-type_lectin_fold,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_EG-like_dom,smart_CUB_dom,smart_Plexin-like_fold,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRN	HGNC	ENSG00000088812	tier1	-	-	54	0	0.00	46	21	31.34
B4GALNT1	0	genome.wustl.edu	37	12	58023911	58023911	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	12	58023911	58023911	C	T	SNP	B4GALNT1	ENST00000550764	human	ensembl	74_37	-1	putative	missense	c.736	p.G246R	0.000	NULL	NULL	-	no_errors	B4GALNT1	HGNC	ENSG00000135454	tier1	-	-	64	0	0.00	30	16	34.78
B4GALT6	0	genome.wustl.edu	37	18	29264323	29264325	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	18	29264323	29264325	AGA	-	DEL	B4GALT6	ENST00000306851	human	ensembl	74_37	-1	known	in_frame_del	c.67_65	p.F22in_frame_del	1.000:1.000:1.000	NULL	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT6	HGNC	ENSG00000118276	tier1			89	0	0.00	51	22	30.14
BARD1	0	genome.wustl.edu	37	2	215646207	215646208	+	Frame_Shift_Del	DEL	TT	TT	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	TT	TT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	215646207	215646208	TT	-	DEL	BARD1	ENST00000260947	human	ensembl	74_37	-1	known	frame_shift_del	c.391_390	p.S131fs	0.000:0.001	NULL	pfam_Ankyrin_rpt,pfam_BRCT_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_BRCT_dom,smart_Ankyrin_rpt,smart_BRCT_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BRCT_dom,pfscan_Znf_RING,prints_Ankyrin_rpt	-	no_errors	BARD1	HGNC	ENSG00000138376	tier1			30	0	0.00	23	27	54.00
BCKDHB	0	genome.wustl.edu	37	6	80880998	80880998	+	Splice_Site	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	80880998	80880998	G	A	SNP	BCKDHB	ENST00000320393	human	ensembl	74_37	+1	known	splice_site	c.634-1	e6-1	1.000	-	-	-	no_errors	BCKDHB	HGNC	ENSG00000083123	tier1	-	-	181	0	0.00	176	67	27.46
BICD1	0	genome.wustl.edu	37	12	32490722	32490722	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	12	32490722	32490722	C	T	SNP	BICD1	ENST00000281474	human	ensembl	74_37	+1	known	missense	c.2542	p.R848W	1.000	NULL	pfam_Bicaudal-D_microtubule-assoc,superfamily_SPOC_like_C_dom	-	no_errors	BICD1	HGNC	ENSG00000151746				34	0	0.00	45	3	6.25
BID	0	genome.wustl.edu	37	22	18220885	18220887	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	22	18220885	18220887	CTT	-	DEL	BID	ENST00000317361	human	ensembl	74_37	-1	known	in_frame_del	c.612_610	p.K204in_frame_del	1.000:1.000:1.000	pfam_BID	pfam_BID	-	no_errors	BID	HGNC	ENSG00000015475	tier1			43	0	0.00	41	16	28.07
C11orf1	0	genome.wustl.edu	37	11	111753212	111753212	+	Silent	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	111753212	111753212	C	A	SNP	C11orf1	ENST00000260276	human	ensembl	74_37	+1	known	silent	c.166	p.R56	1.000	pfam_UPF0686	pfam_UPF0686	-	no_errors	C11orf1	HGNC	ENSG00000137720	tier1	-	-	58	0	0.00	46	12	20.69
C1QL3	0	genome.wustl.edu	37	10	16556665	16556665	+	Nonsense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	10	16556665	16556665	G	T	SNP	C1QL3	ENST00000298943	human	ensembl	74_37	-1	known	nonsense	c.630	p.Y210*	1.000	pfam_C1q,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q	pfam_C1q,pfam_Collagen,superfamily_Tumour_necrosis_fac-like_dom,smart_C1q,pfscan_C1q,prints_C1q	-	no_errors	C1QL3	HGNC	ENSG00000165985	tier1	-	-	48	0	0.00	46	4	8.00
C22orf26	0	genome.wustl.edu	37	22	46449699	46449699	+	Missense_Mutation	SNP	C	C	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	22	46449699	46449699	C	G	SNP	C22orf26	ENST00000333761	human	ensembl	74_37	-1	known	missense	c.275	p.R92P	0.994	NULL	NULL	-	no_errors	C22orf26	HGNC	ENSG00000182257	tier1	-	-	16	0	0.00	12	10	43.48
CARD11	0	genome.wustl.edu	37	7	2956937	2956937	+	Missense_Mutation	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	2956937	2956937	C	A	SNP	CARD11	ENST00000396946	human	ensembl	74_37	-1	known	missense	c.2690	p.G897V	0.986	NULL	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,superfamily_PDZ,pfscan_CARD	-	no_errors	CARD11	HGNC	ENSG00000198286	tier1	-	-	80	0	0.00	99	6	5.71
CCDC180	0	genome.wustl.edu	37	9	100079410	100079410	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	9	100079410	100079410	G	A	SNP	CCDC180	ENST00000375202	human	ensembl	74_37	+1	known	missense	c.991	p.E331K	1.000	NULL	NULL	-	no_errors	CCDC180	HGNC	ENSG00000197816	tier1	-	-	43	0	0.00	16	33	67.35
CCDC66	0	genome.wustl.edu	37	3	56650051	56650051	+	Missense_Mutation	SNP	A	A	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	56650051	56650051	A	T	SNP	CCDC66	ENST00000394672	human	ensembl	74_37	+1	known	missense	c.1813	p.T605S	0.002	NULL	NULL	-	no_errors	CCDC66	HGNC	ENSG00000180376				40	0	0.00	61	5	7.58
CD34	0	genome.wustl.edu	37	1	208063101	208063102	+	Frame_Shift_Del	DEL	AA	AA	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	AA	AA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	208063101	208063102	AA	-	DEL	CD34	ENST00000367036	human	ensembl	74_37	-1	known	frame_shift_del	c.82_81	p.S28fs	0.000:0.000	NULL	pfam_CD34/Podocalyxin,prints_CD34	-	no_errors	CD34	HGNC	ENSG00000174059	tier1			51	0	0.00	32	40	55.56
CHD8	0	genome.wustl.edu	37	14	21897312	21897312	+	Silent	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	14	21897312	21897312	C	A	SNP	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	silent	c.1026	p.L342	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888	tier1	-	-	74	0	0.00	71	36	33.64
CILP2	0	genome.wustl.edu	37	19	19653755	19653755	+	Silent	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	19653755	19653755	G	A	SNP	CILP2	ENST00000291495	human	ensembl	74_37	+1	known	silent	c.951	p.G317	0.989	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Thrombospondin_1_rpt,pfam_Ig_I-set,superfamily_Thrombospondin_1_rpt,superfamily_CarboxyPept-like_regulatory,superfamily_Carb-bd-like_fold,smart_Thrombospondin_1_rpt,smart_Ig_sub,smart_Ig_sub2,pfscan_Thrombospondin_1_rpt,pfscan_Ig-like_dom	-	no_errors	CILP2	HGNC	ENSG00000160161	tier1	-	-	85	0	0.00	84	40	32.26
CLEC14A	0	genome.wustl.edu	37	14	38725089	38725089	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	14	38725089	38725089	G	A	SNP	CLEC14A	ENST00000342213	human	ensembl	74_37	-1	known	missense	c.139	p.R47W	0.037	superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CLEC14A	HGNC	ENSG00000176435	tier1	-	-	16	0	0.00	18	14	43.75
CNTN5	0	genome.wustl.edu	37	11	100064338	100064338	+	Silent	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	100064338	100064338	G	T	SNP	CNTN5	ENST00000279463	human	ensembl	74_37	+1	known	silent	c.1827	p.L609	0.003	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN5	HGNC	ENSG00000149972				44	0	0.00	40	4	9.09
CNTN6	0	genome.wustl.edu	37	3	1414531	1414531	+	Missense_Mutation	SNP	G	G	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	1414531	1414531	G	C	SNP	CNTN6	ENST00000350110	human	ensembl	74_37	+1	known	missense	c.1678	p.G560R	1.000	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	CNTN6	HGNC	ENSG00000134115	tier1	-	-	105	0	0.00	64	30	31.91
COL20A1	0	genome.wustl.edu	37	20	61960763	61960764	+	RNA	DEL	TG	TG	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	20	61960763	61960764	TG	-	DEL	COL20A1	ENST00000496810	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	COL20A1	HGNC	ENSG00000101203	tier1			10	0	0.00	7	4	36.36
COMP	0	genome.wustl.edu	37	19	18899065	18899065	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	18899065	18899065	C	T	SNP	COMP	ENST00000222271	human	ensembl	74_37	-1	known	missense	c.931	p.A311T	1.000	pfam_Thrombospondin_3-like_rpt	pfam_Thrombospondin_C,pfam_EGF-like_Ca-bd_dom,pfam_Thbs/COMP_coiled-coil,pfam_Thrombospondin_3-like_rpt,superfamily_ConA-like_lec_gl_sf,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom	-	no_errors	COMP	HGNC	ENSG00000105664	tier1	-	-	45	0	0.00	25	42	61.76
CRTAP	0	genome.wustl.edu	37	3	33175722	33175722	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	33175722	33175722	G	T	SNP	CRTAP	ENST00000320954	human	ensembl	74_37	+1	known	missense	c.1117	p.D373Y	1.000	NULL	NULL	-	no_errors	CRTAP	HGNC	ENSG00000170275	tier1	-	-	81	0	0.00	65	4	5.80
CSMD1	0	genome.wustl.edu	37	8	3224680	3224680	+	Missense_Mutation	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	8	3224680	3224680	C	A	SNP	CSMD1	ENST00000520002	human	ensembl	74_37	-1	known	missense	c.2992	p.A998S	0.999	pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD1	HGNC	ENSG00000183117	tier1	-	-	42	0	0.00	33	17	34.00
CYP4F8	0	genome.wustl.edu	37	19	15730494	15730494	+	RNA	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	15730494	15730494	G	A	SNP	CYP4F8	ENST00000441682	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.955	-	-	-	no_errors	CYP4F8	HGNC	ENSG00000186526	tier1	-	-	156	0	0.00	102	100	48.78
DAG1	0	genome.wustl.edu	37	3	49570287	49570287	+	Silent	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	49570287	49570287	C	A	SNP	DAG1	ENST00000308775	human	ensembl	74_37	+1	known	silent	c.2343	p.G781	1.000	pfam_DAG1	pfam_DAG1,superfamily_Alpha-dystroglycan_domain_2,superfamily_Cadherin-like,smart_Cadg	-	no_errors	DAG1	HGNC	ENSG00000173402	tier1	-	-	27	0	0.00	15	10	40.00
DHRS7B	0	genome.wustl.edu	37	17	21094331	21094333	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	17	21094331	21094333	GAA	-	DEL	DHRS7B	ENST00000395511	human	ensembl	74_37	+1	known	in_frame_del	c.843_845	p.K285in_frame_del	0.926:0.978:0.996	NULL	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,pfam_DUF1776_fun,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	-	no_errors	DHRS7B	HGNC	ENSG00000109016	tier1			66	0	0.00	62	24	27.91
DLC1	0	genome.wustl.edu	37	8	13357530	13357530	+	Nonsense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	8	13357530	13357530	C	T	SNP	DLC1	ENST00000276297	human	ensembl	74_37	-1	known	nonsense	c.51	p.W17*	0.988	NULL	pfam_START_lipid-bd_dom,pfam_RhoGAP_dom,pfam_SAM_2,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,smart_START_lipid-bd_dom,pfscan_START_lipid-bd_dom,pfscan_RhoGAP_dom	-	no_errors	DLC1	HGNC	ENSG00000164741	tier1	-	-	37	0	0.00	50	19	27.54
DOK3	0	genome.wustl.edu	37	5	176935396	176935396	+	Missense_Mutation	SNP	T	T	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	176935396	176935396	T	G	SNP	DOK3	ENST00000357198	human	ensembl	74_37	-1	known	missense	c.382	p.I128L	1.000	smart_Pleckstrin_homology	pfam_Insln_rcpt_S1,smart_Pleckstrin_homology,smart_Insln_rcpt_S1,pfscan_Insln_rcpt_S1	-	no_errors	DOK3	HGNC	ENSG00000146094	tier1	-	-	23	0	0.00	9	6	37.50
DYNC2H1	0	genome.wustl.edu	37	11	102988516	102988516	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	102988516	102988516	G	A	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	+1	known	missense	c.923	p.R308H	1.000	pfam_Dynein_heavy_dom-1	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DYNC2H1	HGNC	ENSG00000187240	tier1	-	-	89	0	0.00	83	43	34.13
EFEMP1	0	genome.wustl.edu	37	2	56103786	56103786	+	Missense_Mutation	SNP	C	C	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	56103786	56103786	C	G	SNP	EFEMP1	ENST00000355426	human	ensembl	74_37	-1	known	missense	c.852	p.E284D	0.996	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EGF-like_Ca-bd_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	-	no_errors	EFEMP1	HGNC	ENSG00000115380	tier1	-	-	69	0	0.00	77	27	25.96
EIF1	0	genome.wustl.edu	37	17	39845176	39845176	+	RNA	DEL	C	C	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	17	39845176	39845176	C	-	DEL	EIF1	ENST00000310837	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	EIF1	HGNC	ENSG00000173812	tier1			26	0	0.00	36	9	20.00
EIF4G3	0	genome.wustl.edu	37	1	21219891	21219893	+	RNA	DEL	TCT	TCT	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	21219891	21219893	TCT	-	DEL	EIF4G3	ENST00000374933	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.781:0.836:0.918	-	-	-	no_errors	EIF4G3	HGNC	ENSG00000075151	tier1			19	0	0.00	14	2	12.50
ELAVL1	0	genome.wustl.edu	37	19	8028463	8028464	+	Frame_Shift_Del	DEL	AT	AT	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	8028463	8028464	AT	-	DEL	ELAVL1	ENST00000351593	human	ensembl	74_37	-1	known	frame_shift_del	c.966_965	p.Y322fs	1.000:1.000	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,prints_Hud_Sxl_RNA,tigrfam_ELAD_HUD_SF	-	no_errors	ELAVL1	HGNC	ENSG00000066044	tier1			49	0	0.00	46	19	29.23
ENSG00000176593	0	genome.wustl.edu	37	19	58514315	58514315	+	Frame_Shift_Del	DEL	T	T	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	58514315	58514315	T	-	DEL	ENSG00000176593	ENST00000313957	human	ensembl	74_37	+1	known	frame_shift_del	c.54	p.F19fs	0.000	NULL	NULL	-	no_errors	CTD-2368P22.1	Clone_based_vega_gene	ENSG00000176593	tier1			21	0	0.00	21	2	8.70
ENSG00000212098	0	genome.wustl.edu	37	X	94389311	94389311	+	RNA	SNP	T	T	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	X	94389311	94389311	T	A	SNP	ENSG00000212098	ENST00000390809	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.003	-	-	-	no_errors	AL390966.1	Clone_based_ensembl_gene	ENSG00000212098	tier1	-	-	32	0	0.00	9	56	86.15
ENSG00000214733	0	genome.wustl.edu	37	8	144871591	144871591	+	RNA	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	8	144871591	144871591	C	T	SNP	ENSG00000214733	ENST00000534089	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-429J17.8	Clone_based_vega_gene	ENSG00000214733	tier1	-	-	23	0	0.00	26	8	23.53
ENSG00000225996	0	genome.wustl.edu	37	1	150523469	150523469	+	Frame_Shift_Del	DEL	T	T	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	150523469	150523469	T	-	DEL	ENSG00000225996	ENST00000538795	human	ensembl	74_37	+1	known	frame_shift_del	c.398	p.F136fs	0.004	NULL	NULL	-	no_errors	AL356356.1	Clone_based_ensembl_gene	ENSG00000225996	tier1			10	0	0.00	7	4	36.36
ENSG00000235522	0	genome.wustl.edu	37	2	106471762	106471763	+	RNA	INS	-	-	GA			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	106471762	106471763	-	GA	INS	ENSG00000235522	ENST00000598281	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC009505.2	Clone_based_vega_gene	ENSG00000235522	tier1			47	0	0.00	48	12	20.00
ENSG00000236233	0	genome.wustl.edu	37	9	67793766	67793766	+	RNA	DEL	A	A	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	9	67793766	67793766	A	-	DEL	ENSG00000236233	ENST00000315762	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.015	-	-	-	no_errors	RP11-12A20.7	Clone_based_vega_gene	ENSG00000236233	tier1			11	0	0.00	1	5	83.33
ENSG00000243107	0	genome.wustl.edu	37	7	91829671	91829672	+	RNA	INS	-	-	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	91829671	91829672	-	T	INS	ENSG00000243107	ENST00000414227	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.024:0.076	-	-	-	no_errors	AC000120.7	Clone_based_vega_gene	ENSG00000243107	tier1			18	0	0.00	18	4	18.18
ENSG00000244306	0	genome.wustl.edu	37	14	19856162	19856162	+	RNA	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	14	19856162	19856162	G	A	SNP	ENSG00000244306	ENST00000551334	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.596	-	-	-	no_errors	CTD-2314B22.3	Clone_based_vega_gene	ENSG00000244306	tier1	-	-	9	0	0.00	3	3	50.00
ENSG00000249898	0	genome.wustl.edu	37	8	6478732	6478733	+	RNA	INS	-	-	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	8	6478732	6478733	-	T	INS	ENSG00000249898	ENST00000515608	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.002	-	-	-	no_errors	CTD-2541M15.1	Clone_based_vega_gene	ENSG00000249898	tier1			10	0	0.00	5	2	28.57
ENSG00000257931	0	genome.wustl.edu	37	14	19969313	19969313	+	RNA	SNP	T	T	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	14	19969313	19969313	T	A	SNP	ENSG00000257931	ENST00000547399	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	CTD-2311B13.7	Clone_based_vega_gene	ENSG00000257931				40	0	0.00	50	5	9.09
ENSG00000258377	0	genome.wustl.edu	37	14	50089335	50089336	+	RNA	DEL	CA	CA	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	14	50089335	50089336	CA	-	DEL	ENSG00000258377	ENST00000555043	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.122:0.115	-	-	-	no_errors	RP11-649E7.5	Clone_based_vega_gene	ENSG00000258377	tier1			44	0	0.00	52	29	35.80
ENSG00000266535	0	genome.wustl.edu	37	17	31439098	31439099	+	RNA	DEL	AG	AG	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	17	31439098	31439099	AG	-	DEL	ENSG00000266535	ENST00000584688	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.563:0.970	-	-	-	no_errors	RP11-40A13.1	Clone_based_vega_gene	ENSG00000266535	tier1			23	0	0.00	38	4	9.52
EPHA10	0	genome.wustl.edu	37	1	38227500	38227500	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	38227500	38227500	G	T	SNP	EPHA10	ENST00000427468	human	ensembl	74_37	-1	known	missense	c.427	p.R143S	0.947	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_SAM/pointed,superfamily_Fibronectin_type3,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHA10	HGNC	ENSG00000183317	tier1	-	-	39	0	0.00	20	13	39.39
EPHB6	0	genome.wustl.edu	37	7	142561730	142561730	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	142561730	142561730	G	A	SNP	EPHB6	ENST00000392957	human	ensembl	74_37	+1	known	missense	c.172	p.E58K	1.000	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ephrin_rcpt_lig-bd_dom,superfamily_Galactose-bd-like,smart_Ephrin_rcpt_lig-bd_dom	pirsf_Tyr_kinase_ephrin_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_2,pfam_SAM_type1,pfam_Tyr-kin_ephrin_A/B_rcpt-like,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom	-	no_errors	EPHB6	HGNC	ENSG00000106123	tier1	-	-	40	0	0.00	69	10	12.66
EPX	0	genome.wustl.edu	37	17	56271184	56271186	+	In_Frame_Del	DEL	CAA	CAA	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	CAA	CAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	17	56271184	56271186	CAA	-	DEL	EPX	ENST00000225371	human	ensembl	74_37	+1	known	in_frame_del	c.456_458	p.N154in_frame_del	1.000:1.000:1.000	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal	pfam_Haem_peroxidase_animal,superfamily_Haem_peroxidase,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	EPX	HGNC	ENSG00000121053	tier1			43	0	0.00	34	24	41.38
ESPL1	0	genome.wustl.edu	37	12	53663026	53663027	+	Frame_Shift_Del	DEL	TC	TC	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	TC	TC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	12	53663026	53663027	TC	-	DEL	ESPL1	ENST00000257934	human	ensembl	74_37	+1	known	frame_shift_del	c.300_301	p.F102fs	0.999:1.000	NULL	pfam_Peptidase_C50,superfamily_DsrEFH-like	-	no_errors	ESPL1	HGNC	ENSG00000135476	tier1			39	0	0.00	24	5	17.24
EVPL	0	genome.wustl.edu	37	17	74006238	74006238	+	Silent	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	17	74006238	74006238	G	T	SNP	EVPL	ENST00000301607	human	ensembl	74_37	-1	known	silent	c.3048	p.T1016	1.000	NULL	pfam_Plectin_repeat,superfamily_Ferritin-like_SF,smart_Spectrin/alpha-actinin,smart_Plectin_repeat	-	no_errors	EVPL	HGNC	ENSG00000167880	tier1	-	-	29	0	0.00	58	4	6.45
EXOSC8	0	genome.wustl.edu	37	13	37576435	37576437	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	13	37576435	37576437	AGG	-	DEL	EXOSC8	ENST00000389704	human	ensembl	74_37	+1	known	in_frame_del	c.43_45	p.R16in_frame_del	1.000:1.000:1.000	NULL	pfam_ExoRNase_PH_dom1,pfam_ExoRNase_PH_dom2,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_ExoRNase_PH_dom2	-	no_errors	EXOSC8	HGNC	ENSG00000120699	tier1			24	0	0.00	29	9	23.68
FAM105A	0	genome.wustl.edu	37	5	14610461	14610461	+	RNA	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	14610461	14610461	G	A	SNP	FAM105A	ENST00000506258	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.001	-	-	-	no_errors	FAM105A	HGNC	ENSG00000145569	tier1	-	-	24	0	0.00	24	19	43.18
FAM107A	0	genome.wustl.edu	37	3	58574945	58574945	+	Silent	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	58574945	58574945	G	T	SNP	FAM107A	ENST00000474531	human	ensembl	74_37	-1	putative	silent	c.76	p.R26	0.006	NULL	pfam_DUF1151	-	no_errors	FAM107A	HGNC	ENSG00000168309	tier1	-	-	63	0	0.00	73	4	5.19
FAM114A2	0	genome.wustl.edu	37	5	153374608	153374609	+	RNA	DEL	AC	AC	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	AC	AC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	153374608	153374609	AC	-	DEL	FAM114A2	ENST00000518946	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.019:0.007	-	-	-	no_errors	FAM114A2	HGNC	ENSG00000055147	tier1			34	0	0.00	21	3	12.50
FAM19A3	0	genome.wustl.edu	37	1	113264887	113264887	+	Missense_Mutation	SNP	C	C	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	113264887	113264887	C	G	SNP	FAM19A3	ENST00000369630	human	ensembl	74_37	+1	known	missense	c.32	p.T11R	0.030	NULL	pfam_Chemokine-like_FAM19A2	-	no_errors	FAM19A3	HGNC	ENSG00000184599				25	0	0.00	35	2	5.41
FAM47C	0	genome.wustl.edu	37	X	37027774	37027774	+	Frame_Shift_Del	DEL	C	C	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	X	37027774	37027774	C	-	DEL	FAM47C	ENST00000358047	human	ensembl	74_37	+1	known	frame_shift_del	c.1291	p.K432fs	0.435	NULL	NULL	-	no_errors	FAM47C	HGNC	ENSG00000198173	tier1			116	0	0.00	39	80	67.23
FAM78A	0	genome.wustl.edu	37	9	134151290	134151290	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	9	134151290	134151290	C	T	SNP	FAM78A	ENST00000372271	human	ensembl	74_37	-1	known	missense	c.277	p.A93T	1.000	NULL	NULL	-	no_errors	FAM78A	HGNC	ENSG00000126882				37	0	0.00	43	3	6.52
FAM83B	0	genome.wustl.edu	37	6	54791310	54791310	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	54791310	54791310	G	A	SNP	FAM83B	ENST00000306858	human	ensembl	74_37	+1	known	missense	c.586	p.G196S	0.956	pfam_DUF1669	pfam_DUF1669	-	no_errors	FAM83B	HGNC	ENSG00000168143	tier1	-	-	60	0	0.00	38	14	26.92
FANCM	0	genome.wustl.edu	37	14	45623219	45623219	+	Missense_Mutation	SNP	T	T	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	14	45623219	45623219	T	C	SNP	FANCM	ENST00000267430	human	ensembl	74_37	+1	known	missense	c.1147	p.Y383H	1.000	superfamily_P-loop_NTPase	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase_C,pfam_Helicase/UvrB_dom,superfamily_P-loop_NTPase,superfamily_Restrct_endonuc-II-like,superfamily_RuvA_2-like,smart_Helicase_ATP-bd,smart_Helicase_C,smart_ERCC4_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	FANCM	HGNC	ENSG00000187790	tier1	-	-	53	0	0.00	40	31	43.66
FAP	0	genome.wustl.edu	37	2	163074549	163074549	+	Missense_Mutation	SNP	A	A	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	163074549	163074549	A	G	SNP	FAP	ENST00000188790	human	ensembl	74_37	-1	known	missense	c.709	p.S237P	1.000	pfam_Peptidase_S9B	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	FAP	HGNC	ENSG00000078098	tier1	-	-	31	0	0.00	36	31	46.27
FCHO2	0	genome.wustl.edu	37	5	72354318	72354320	+	In_Frame_Del	DEL	TCT	TCT	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	TCT	TCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	72354318	72354320	TCT	-	DEL	FCHO2	ENST00000341845	human	ensembl	74_37	+1	known	in_frame_del	c.1312_1314	p.S441in_frame_del	0.930:0.927:0.004	NULL	pfam_Muniscin_C-term_mu_dom,pfam_FCH_dom,smart_FCH_dom,pfscan_FCH_dom	-	no_errors	FCHO2	HGNC	ENSG00000157107	tier1			122	0	0.00	124	63	33.69
FCRL3	0	genome.wustl.edu	37	1	157648846	157648846	+	RNA	SNP	A	A	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	157648846	157648846	A	G	SNP	FCRL3	ENST00000468507	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	FCRL3	HGNC	ENSG00000160856	tier1	-	-	13	0	0.00	12	6	33.33
FEM1B	0	genome.wustl.edu	37	15	68582270	68582270	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	15	68582270	68582270	C	T	SNP	FEM1B	ENST00000306917	human	ensembl	74_37	+1	known	missense	c.574	p.H192Y	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Ankyrin_rpt	-	no_errors	FEM1B	HGNC	ENSG00000169018	tier1	-	-	21	0	0.00	21	7	25.00
FEZ1	0	genome.wustl.edu	37	11	125315975	125315975	+	RNA	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	125315975	125315975	G	A	SNP	FEZ1	ENST00000526507	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	FEZ1	HGNC	ENSG00000149557	tier1	-	-	29	0	0.00	34	4	10.53
FLVCR1	0	genome.wustl.edu	37	1	213037120	213037120	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	213037120	213037120	G	T	SNP	FLVCR1	ENST00000366971	human	ensembl	74_37	+1	known	missense	c.792	p.Q264H	0.362	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	FLVCR1	HGNC	ENSG00000162769	tier1	-	-	58	0	0.00	76	4	5.00
FOXC1	0	genome.wustl.edu	37	6	1610969	1610971	+	In_Frame_Del	DEL	AAG	AAG	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	AAG	AAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	1610969	1610971	AAG	-	DEL	FOXC1	ENST00000380874	human	ensembl	74_37	+1	known	in_frame_del	c.289_291	p.K98in_frame_del	1.000:1.000:1.000	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	-	no_errors	FOXC1	HGNC	ENSG00000054598	tier1			131	0	0.00	37	41	52.56
FOXP2	0	genome.wustl.edu	37	7	114329835	114329835	+	Splice_Site	SNP	A	A	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	114329835	114329835	A	T	SNP	FOXP2	ENST00000408937	human	ensembl	74_37	+1	known	splice_site	c.2079-2	e17-2	1.000	-	-	-	no_errors	FOXP2	HGNC	ENSG00000128573	tier1	-	-	41	0	0.00	39	16	29.09
G3BP1	0	genome.wustl.edu	37	5	151183521	151183521	+	Nonsense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	151183521	151183521	C	T	SNP	G3BP1	ENST00000356245	human	ensembl	74_37	+1	known	nonsense	c.1270	p.R424*	0.881	NULL	pfam_NTF2,pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,pfscan_Nuclear_transport_factor_2_euk	-	no_errors	G3BP1	HGNC	ENSG00000145907	tier1	-	-	41	0	0.00	29	16	35.56
GALNT18	0	genome.wustl.edu	37	11	11348709	11348709	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	11348709	11348709	G	T	SNP	GALNT18	ENST00000227756	human	ensembl	74_37	-1	known	missense	c.1436	p.T479N	0.941	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT18	HGNC	ENSG00000110328				69	0	0.00	61	4	6.15
GAS6	0	genome.wustl.edu	37	13	114535732	114535732	+	Silent	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	13	114535732	114535732	C	T	SNP	GAS6	ENST00000357389	human	ensembl	74_37	-1	known	silent	c.957	p.P319	0.015	superfamily_ConA-like_lec_gl_sf	pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,pfam_GLA_domain,superfamily_ConA-like_lec_gl_sf,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Laminin_G,prints_GLA_domain	-	no_errors	GAS6	HGNC	ENSG00000183087	tier1	-	-	53	0	0.00	64	4	5.88
GATA1	0	genome.wustl.edu	37	X	48652620	48652620	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	X	48652620	48652620	G	T	SNP	GATA1	ENST00000376665	human	ensembl	74_37	+1	novel	missense	c.950	p.C317F	0.006	NULL	pfam_Znf_GATA,smart_Znf_GATA,pfscan_Znf_GATA,prints_Znf_GATA	-	no_errors	GATA1	HGNC	ENSG00000102145	tier1	-	-	42	0	0.00	55	4	6.78
GGCX	0	genome.wustl.edu	37	2	85785767	85785767	+	Nonstop_Mutation	SNP	C	C	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	85785767	85785767	C	G	SNP	GGCX	ENST00000428479	human	ensembl	74_37	-1	known	nonstop	c.221	p.*74S	0.985	NULL	pfam_VKG_COase	-	no_errors	GGCX	HGNC	ENSG00000115486	tier1	-	-	61	0	0.00	77	16	17.20
GGT2	0	genome.wustl.edu	37	22	21570257	21570257	+	Silent	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	22	21570257	21570257	G	A	SNP	GGT2	ENST00000401924	human	ensembl	74_37	-1	known	silent	c.690	p.N230	0.883	pfam_GGT_peptidase	pfam_GGT_peptidase,prints_GGT_peptidase	-	no_errors	GGT2	HGNC	ENSG00000133475	tier1	rs200714390	-	24	0	0.00	30	7	18.92
GJA8	0	genome.wustl.edu	37	1	147381177	147381177	+	Silent	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	147381177	147381177	C	A	SNP	GJA8	ENST00000240986	human	ensembl	74_37	+1	known	silent	c.1095	p.A365	0.000	NULL	pfam_Connexin_N,pfam_Connexin50,pfam_Connexin_CCC,smart_Connexin_N,prints_Connexin,prints_Connexin50	-	no_errors	GJA8	HGNC	ENSG00000121634				36	0	0.00	42	3	6.67
GPBP1L1	0	genome.wustl.edu	37	1	46093254	46093256	+	RNA	DEL	AAT	AAT	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	AAT	AAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	46093254	46093256	AAT	-	DEL	GPBP1L1	ENST00000479235	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000:1.000:1.000	-	-	-	no_errors	GPBP1L1	HGNC	ENSG00000159592	tier1			133	0	0.00	123	43	25.90
GPX3	0	genome.wustl.edu	37	5	150400197	150400197	+	RNA	SNP	A	A	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	150400197	150400197	A	G	SNP	GPX3	ENST00000521722	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	GPX3	HGNC	ENSG00000211445	tier1	-	-	39	0	0.00	28	14	33.33
GRM3	0	genome.wustl.edu	37	7	86415818	86415818	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	86415818	86415818	G	A	SNP	GRM3	ENST00000361669	human	ensembl	74_37	+1	known	missense	c.710	p.R237H	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM3	HGNC	ENSG00000198822				36	0	0.00	56	3	5.08
GRM7	0	genome.wustl.edu	37	3	6903375	6903375	+	Silent	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	6903375	6903375	G	T	SNP	GRM7	ENST00000402647	human	ensembl	74_37	+1	known	silent	c.300	p.T100	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_7,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_4	-	no_errors	GRM7	HGNC	ENSG00000196277	tier1	-	-	43	0	0.00	49	4	7.55
GTF2IRD2P1	0	genome.wustl.edu	37	7	72664015	72664016	+	RNA	INS	-	-	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	72664015	72664016	-	G	INS	GTF2IRD2P1	ENST00000425256	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.912:0.964	-	-	-	no_errors	GTF2IRD2P1	HGNC	ENSG00000214544	tier1			11	0	0.00	14	4	22.22
GTF3C2	0	genome.wustl.edu	37	2	27564940	27564940	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	27564940	27564940	G	A	SNP	GTF3C2	ENST00000264720	human	ensembl	74_37	-1	known	missense	c.730	p.R244W	0.004	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	GTF3C2	HGNC	ENSG00000115207	tier1	-	-	92	0	0.00	81	27	24.77
HIST1H1E	0	genome.wustl.edu	37	6	26156678	26156680	+	In_Frame_Del	DEL	GAA	GAA	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	GAA	GAA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	26156678	26156680	GAA	-	DEL	HIST1H1E	ENST00000304218	human	ensembl	74_37	+1	known	in_frame_del	c.60_62	p.K23in_frame_del	0.932:0.994:0.999	prints_Histone_H5	pfam_Histone_H1/H5_H15,smart_Histone_H1/H5_H15,prints_Histone_H5	-	no_errors	HIST1H1E	HGNC	ENSG00000168298	tier1			56	0	0.00	23	17	42.50
HOOK1	0	genome.wustl.edu	37	1	60336638	60336638	+	RNA	SNP	A	A	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	60336638	60336638	A	G	SNP	HOOK1	ENST00000491135	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	HOOK1	HGNC	ENSG00000134709	tier1	-	-	23	0	0.00	29	10	25.64
HRCT1	0	genome.wustl.edu	37	9	35906300	35906300	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	9	35906300	35906300	G	A	SNP	HRCT1	ENST00000354323	human	ensembl	74_37	+1	known	missense	c.16	p.G6R	0.998	NULL	NULL	-	no_errors	HRCT1	HGNC	ENSG00000196196	tier1	-	-	29	0	0.00	20	20	50.00
HSD17B10	0	genome.wustl.edu	37	X	53459303	53459303	+	Silent	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	X	53459303	53459303	G	A	SNP	HSD17B10	ENST00000168216	human	ensembl	74_37	-1	known	silent	c.249	p.G83	1.000	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR	pfam_DH_sc/Rdtase_SDR,pfam_PKS_KR,prints_Glc/ribitol_DH,prints_DH_sc/Rdtase_SDR,prints_ADH_insect,prints_DHB_DH	-	no_errors	HSD17B10	HGNC	ENSG00000072506				39	0	0.00	57	3	5.00
HTRA3	0	genome.wustl.edu	37	4	8272043	8272043	+	Silent	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	4	8272043	8272043	G	A	SNP	HTRA3	ENST00000307358	human	ensembl	74_37	+1	known	silent	c.348	p.T116	0.986	pfam_Kazal_dom,smart_Kazal_dom	pfam_Peptidase_S1,pfam_Kazal_dom,pfam_PDZ,superfamily_Trypsin-like_Pept_dom,superfamily_PDZ,smart_IGFBP-like,smart_Kazal_dom,smart_PDZ,pfscan_PDZ,prints_Peptidase_S1C	-	no_errors	HTRA3	HGNC	ENSG00000170801	tier1	-	-	8	0	0.00	0	6	100.00
IGF1R	0	genome.wustl.edu	37	15	99434834	99434834	+	Silent	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	15	99434834	99434834	C	T	SNP	IGF1R	ENST00000268035	human	ensembl	74_37	+1	known	silent	c.921	p.C307	1.000	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Furin-like_Cys-rich_dom,superfamily_Growth_fac_rcpt_N_dom	pirsf_Tyr_kinase_insulin-like_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_EGF_rcpt_L,pfam_Prot_kinase_dom,pfam_Furin-like_Cys-rich_dom,pfam_Fibronectin_type3,superfamily_Kinase-like_dom,superfamily_Growth_fac_rcpt_N_dom,superfamily_Fibronectin_type3,smart_Furin_repeat,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom	-	no_errors	IGF1R	HGNC	ENSG00000140443				55	0	0.00	76	4	5.00
IGF2-AS	0	genome.wustl.edu	37	11	2161780	2161780	+	RNA	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	2161780	2161780	G	T	SNP	IGF2-AS	ENST00000381361	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.233	-	-	-	no_errors	IGF2-AS	HGNC	ENSG00000099869	tier1	-	-	47	0	0.00	38	19	33.33
IMPA2	0	genome.wustl.edu	37	18	12012291	12012292	+	Frame_Shift_Del	DEL	TG	TG	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	TG	TG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	18	12012291	12012292	TG	-	DEL	IMPA2	ENST00000590107	human	ensembl	74_37	+1	known	frame_shift_del	c.458_459	p.C154fs	0.000:0.000	NULL	pfam_Inositol_monophosphatase,prints_Inositol_monophosphatase,prints_Inositol_monoPase_Li-sen	-	no_errors	IMPA2	HGNC	ENSG00000141401	tier1			66	0	0.00	80	17	17.53
INPPL1	0	genome.wustl.edu	37	11	71948432	71948433	+	Frame_Shift_Ins	INS	-	-	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	71948432	71948433	-	C	INS	INPPL1	ENST00000298229	human	ensembl	74_37	+1	known	frame_shift_ins	c.3144_3145	p.P1050fs	1.000:1.000	NULL	pfam_Endo/exonuclease/phosphatase,pfam_SH2,pfam_SAM_2,pfam_SAM_type1,superfamily_Endo/exonuclease/phosphatase,superfamily_SAM/pointed,smart_SH2,smart_IPPc,smart_SAM,pfscan_SAM,pfscan_SH2,prints_SH2	-	no_errors	INPPL1	HGNC	ENSG00000165458	tier1			87	0	0.00	49	32	39.51
INTS3	0	genome.wustl.edu	37	1	153745101	153745101	+	Silent	SNP	T	T	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	153745101	153745101	T	C	SNP	INTS3	ENST00000456435	human	ensembl	74_37	+1	known	silent	c.2388	p.P796	0.000	NULL	pfam_Int_cplx_su3	-	no_errors	INTS3	HGNC	ENSG00000143624				66	0	0.00	62	4	6.06
ISX	0	genome.wustl.edu	37	22	35480444	35480444	+	Silent	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	22	35480444	35480444	G	A	SNP	ISX	ENST00000308700	human	ensembl	74_37	+1	known	silent	c.450	p.Q150	0.019	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom	-	no_errors	ISX	HGNC	ENSG00000175329				59	0	0.00	56	4	6.67
ITGA2	0	genome.wustl.edu	37	5	52358761	52358762	+	Splice_Site	INS	-	-	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	52358761	52358762	-	A	INS	ITGA2	ENST00000296585	human	ensembl	74_37	+1	known	splice_site_ins	c.1602+2_1602+1	e13+2	1.000:1.000	-	-	-	no_errors	ITGA2	HGNC	ENSG00000164171	tier1			46	0	0.00	47	6	11.32
JAK2	0	genome.wustl.edu	37	9	5126757	5126757	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	9	5126757	5126757	G	A	SNP	JAK2	ENST00000381652	human	ensembl	74_37	+1	known	missense	c.3365	p.R1122Q	1.000	smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH2,superfamily_Kinase-like_dom,superfamily_FERM_central,smart_Band_41_domain,smart_SH2,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pirsf_Tyr_kinase_non-rcpt_Jak/Tyk2,pfscan_FERM_domain,pfscan_SH2,pfscan_Prot_kinase_dom,prints_Tyr_kinase_non-rcpt_Jak/Tyk2,prints_Tyr_kinase_non-rcpt_Jak2,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	JAK2	HGNC	ENSG00000096968	tier1	-	-	52	0	0.00	41	21	33.87
KANSL1	0	genome.wustl.edu	37	17	44248371	44248371	+	Nonsense_Mutation	SNP	A	A	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	17	44248371	44248371	A	T	SNP	KANSL1	ENST00000262419	human	ensembl	74_37	-1	known	nonsense	c.1139	p.L380*	1.000	NULL	NULL	-	no_errors	KANSL1	HGNC	ENSG00000120071	tier1	-	-	64	0	0.00	29	48	62.34
KCND2	0	genome.wustl.edu	37	7	120387853	120387853	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	120387853	120387853	G	A	SNP	KCND2	ENST00000331113	human	ensembl	74_37	+1	known	missense	c.1834	p.D612N	0.995	NULL	pfam_K_chnl_volt-dep_Kv4_C,pfam_T1-type_BTB,pfam_Ion_trans_dom,pfam_Shal-type,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv4,prints_K_chnl_volt-dep_Kv4.2,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv3	-	no_errors	KCND2	HGNC	ENSG00000184408	tier1	rs151258092	-	44	0	0.00	49	11	18.33
KCNK5	0	genome.wustl.edu	37	6	39163742	39163742	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	39163742	39163742	G	T	SNP	KCNK5	ENST00000359534	human	ensembl	74_37	-1	known	missense	c.208	p.Q70K	0.999	NULL	pfam_2pore_dom_K_chnl_dom,prints_2pore_dom_K_chnl,prints_2pore_dom_K_chnl_TASK	-	no_errors	KCNK5	HGNC	ENSG00000164626	tier1	-	-	71	0	0.00	68	4	5.56
KCTD14	0	genome.wustl.edu	37	11	77727684	77727684	+	Silent	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	77727684	77727684	G	A	SNP	KCTD14	ENST00000353172	human	ensembl	74_37	-1	known	silent	c.723	p.N241	0.001	NULL	pfam_T1-type_BTB,superfamily_BTB/POZ_fold,smart_BTB/POZ-like	-	no_errors	KCTD14	HGNC	ENSG00000151364	tier1	-	-	48	0	0.00	27	21	43.75
KIAA1191	0	genome.wustl.edu	37	5	175775006	175775006	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	175775006	175775006	G	T	SNP	KIAA1191	ENST00000298569	human	ensembl	74_37	-1	known	missense	c.627	p.D209E	0.990	NULL	NULL	-	no_errors	KIAA1191	HGNC	ENSG00000122203				28	0	0.00	44	3	6.38
KIAA1239	0	genome.wustl.edu	37	4	37448106	37448106	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	4	37448106	37448106	C	T	SNP	KIAA1239	ENST00000309447	human	ensembl	74_37	+1	known	missense	c.4496	p.S1499L	0.998	superfamily_WD40_repeat_dom	superfamily_WD40_repeat_dom,superfamily_P-loop_NTPase,smart_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	KIAA1239	HGNC	ENSG00000174145	tier1	-	-	35	0	0.00	35	20	36.36
KIAA1429	0	genome.wustl.edu	37	8	95538542	95538543	+	Frame_Shift_Ins	INS	-	-	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	8	95538542	95538543	-	A	INS	KIAA1429	ENST00000297591	human	ensembl	74_37	-1	known	frame_shift_ins	c.1930_1929	p.T643fs	0.997:0.994	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	KIAA1429	HGNC	ENSG00000164944	tier1			74	0	0.00	99	30	23.26
KIF15	0	genome.wustl.edu	37	3	44879865	44879865	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	44879865	44879865	G	T	SNP	KIF15	ENST00000326047	human	ensembl	74_37	+1	known	missense	c.3270	p.Q1090H	0.998	NULL	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF15	HGNC	ENSG00000163808	tier1	-	-	21	0	0.00	29	13	30.95
KIF7	0	genome.wustl.edu	37	15	90191892	90191892	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	15	90191892	90191892	G	A	SNP	KIF7	ENST00000394412	human	ensembl	74_37	-1	known	missense	c.1037	p.A346V	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF7	HGNC	ENSG00000166813				8	0	0.00	6	3	33.33
KLHL30	0	genome.wustl.edu	37	2	239049972	239049972	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	239049972	239049972	G	A	SNP	KLHL30	ENST00000409223	human	ensembl	74_37	+1	known	missense	c.577	p.E193K	1.000	pfam_BACK,smart_BACK,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL30	HGNC	ENSG00000168427	tier1	-	-	22	0	0.00	13	37	74.00
KMT2B	0	genome.wustl.edu	37	19	36214349	36214349	+	Frame_Shift_Del	DEL	A	A	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	36214349	36214349	A	-	DEL	KMT2B	ENST00000222270	human	ensembl	74_37	+1	known	frame_shift_del	c.3003	p.Y1002fs	1.000	pirsf_MeTrfase_trithorax,pfam_Znf_CXXC,pfscan_Znf_CXXC	pirsf_MeTrfase_trithorax,pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333	tier1			44	0	0.00	44	15	25.42
LGR6	0	genome.wustl.edu	37	1	202276457	202276457	+	Splice_Site	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	202276457	202276457	G	T	SNP	LGR6	ENST00000367278	human	ensembl	74_37	+1	known	splice_site	c.1209-1	e14-1	1.000	-	-	-	no_errors	LGR6	HGNC	ENSG00000133067				37	0	0.00	33	2	5.71
LINC00917	0	genome.wustl.edu	37	16	86371017	86371017	+	RNA	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	16	86371017	86371017	C	T	SNP	LINC00917	ENST00000304488	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	LINC00917	HGNC	ENSG00000168367	tier1	-	-	43	0	0.00	42	61	59.22
LMNB1	0	genome.wustl.edu	37	5	126113552	126113554	+	In_Frame_Del	DEL	CTC	CTC	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	CTC	CTC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	126113552	126113554	CTC	-	DEL	LMNB1	ENST00000261366	human	ensembl	74_37	+1	known	in_frame_del	c.352_354	p.L119in_frame_del	0.995:0.892:0.758	pfam_IF	pfam_IF,pfam_Lamin_tail_dom	-	no_errors	LMNB1	HGNC	ENSG00000113368	tier1			25	0	0.00	10	10	50.00
LOC100996415	0	genome.wustl.edu	37	22	20342426	20342426	+	RNA	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	22	20342426	20342426	C	T	SNP	LOC100996415	ENST00000454636	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007	-	-	-	no_errors	XXbac-B33L19.3	Clone_based_vega_gene	ENSG00000188424	tier1	-	-	56	0	0.00	68	7	9.33
LPPR1	0	genome.wustl.edu	37	9	104032144	104032144	+	RNA	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	9	104032144	104032144	G	A	SNP	LPPR1	ENST00000463206	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LPPR1	Uniprot_gn	ENSG00000148123	tier1	-	-	32	0	0.00	47	4	7.84
LRRC16B	0	genome.wustl.edu	37	14	24530854	24530854	+	Missense_Mutation	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	14	24530854	24530854	C	A	SNP	LRRC16B	ENST00000342740	human	ensembl	74_37	+1	known	missense	c.2453	p.A818E	1.000	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC16B	HGNC	ENSG00000186648	tier1	-	-	20	0	0.00	33	11	25.00
MAGEC3	0	genome.wustl.edu	37	X	140984538	140984538	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	X	140984538	140984538	G	A	SNP	MAGEC3	ENST00000536088	human	ensembl	74_37	+1	known	missense	c.100	p.E34K	0.165	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC3	HGNC	ENSG00000165509	tier1	-	-	16	0	0.00	2	19	90.48
MAML2	0	genome.wustl.edu	37	11	95825386	95825386	+	Silent	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	95825386	95825386	C	T	SNP	MAML2	ENST00000524717	human	ensembl	74_37	-1	known	silent	c.1809	p.Q603	0.000	NULL	pfam_Neuroggenic_mastermind-like_N	-	no_errors	MAML2	HGNC	ENSG00000184384	tier1	-	-	69	0	0.00	59	6	9.23
MANEA	0	genome.wustl.edu	37	6	96044631	96044631	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	96044631	96044631	G	T	SNP	MANEA	ENST00000358812	human	ensembl	74_37	+1	known	missense	c.563	p.W188L	1.000	superfamily_Glycoside_hydrolase_SF	superfamily_Glycoside_hydrolase_SF	-	no_errors	MANEA	HGNC	ENSG00000172469				24	0	0.00	34	4	10.53
MAP3K9	0	genome.wustl.edu	37	14	71275774	71275776	+	In_Frame_Del	DEL	CCT	CCT	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	CCT	CCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	14	71275774	71275776	CCT	-	DEL	MAP3K9	ENST00000555993	human	ensembl	74_37	-1	known	in_frame_del	c.115_113	p.E38in_frame_del	1.000:1.000:0.998	pirsf_MAPKKK9/10/11	pirsf_MAPKKK9/10/11,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_SH3_2,pfam_SH3_domain,superfamily_Kinase-like_dom,superfamily_SH3_domain,superfamily_Regulat_G_prot_signal_superfam,smart_SH3_domain,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,prints_SH3_domain,pfscan_SH3_domain,pfscan_Prot_kinase_dom	-	no_errors	MAP3K9	HGNC	ENSG00000006432	tier1			17	0	0.00	22	4	15.38
MAST4	0	genome.wustl.edu	37	5	66462641	66462641	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	66462641	66462641	G	A	SNP	MAST4	ENST00000404260	human	ensembl	74_37	+1	known	missense	c.7643	p.S2548N	0.469	NULL	pfam_MA_Ser/Thr_Kinase_dom,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_PDZ,superfamily_Kinase-like_dom,superfamily_MAST_pre-PK_dom,superfamily_PDZ,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_PDZ,pfscan_PDZ,pfscan_Prot_kinase_dom	-	no_errors	MAST4	HGNC	ENSG00000069020				75	0	0.00	56	4	6.56
MDFI	0	genome.wustl.edu	37	6	41621140	41621140	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	41621140	41621140	G	T	SNP	MDFI	ENST00000230321	human	ensembl	74_37	+1	known	missense	c.568	p.G190C	1.000	NULL	NULL	-	no_errors	MDFI	HGNC	ENSG00000112559				37	0	0.00	33	2	5.71
MEX3A	0	genome.wustl.edu	37	1	156047372	156047372	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	156047372	156047372	C	T	SNP	MEX3A	ENST00000532414	human	ensembl	74_37	-1	known	missense	c.556	p.V186M	1.000	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,smart_KH_dom,smart_Znf_RING,pfscan_Znf_RING,pfscan_KH_dom_type_1	-	no_errors	MEX3A	HGNC	ENSG00000254726	tier1	-	-	47	0	0.00	17	13	41.94
MFSD8	0	genome.wustl.edu	37	4	128841926	128841926	+	Silent	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	4	128841926	128841926	G	T	SNP	MFSD8	ENST00000296468	human	ensembl	74_37	-1	known	silent	c.1416	p.I472	1.000	superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	MFSD8	HGNC	ENSG00000164073	tier1	-	-	65	0	0.00	67	4	5.63
MIR3199-2	0	genome.wustl.edu	37	22	28316591	28316591	+	RNA	SNP	T	T	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	22	28316591	28316591	T	G	SNP	MIR3199-2	ENST00000582434	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	MIR3199-2	HGNC	ENSG00000264073				30	0	0.00	43	5	10.42
MIR585	0	genome.wustl.edu	37	5	168690685	168690685	+	RNA	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	168690685	168690685	G	A	SNP	MIR585	ENST00000384887	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	MIR585	HGNC	ENSG00000207619	tier1	-	-	71	0	0.00	32	18	36.00
MLPH	0	genome.wustl.edu	37	2	238419374	238419374	+	Frame_Shift_Del	DEL	A	A	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	238419374	238419374	A	-	DEL	MLPH	ENST00000264605	human	ensembl	74_37	+1	known	frame_shift_del	c.268	p.S91fs	0.940	superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	pfam_Myrip/Melanophilin,superfamily_Znf_FYVE_PHD,pfscan_Znf_FYVE-typ	-	no_errors	MLPH	HGNC	ENSG00000115648	tier1			40	0	0.00	33	2	5.71
MPC1	0	genome.wustl.edu	37	6	166779523	166779523	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	166779523	166779523	C	T	SNP	MPC1	ENST00000341756	human	ensembl	74_37	-1	known	missense	c.244	p.A82T	0.976	pfam_MPC	pfam_MPC	-	no_errors	MPC1	HGNC	ENSG00000060762	tier1	-	-	57	0	0.00	65	4	5.80
MSN	0	genome.wustl.edu	37	X	64956728	64956730	+	In_Frame_Del	DEL	AGG	AGG	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	X	64956728	64956730	AGG	0	DEL	MSN	ENST00000360270	human	ensembl	74_37	+1	known	in_frame_del	c.1031_1033	p.E346in_frame_del	1.000:0.998:1.000	pirsf_ERM,pfam_ERM_C_dom	pirsf_ERM,pfam_ERM_C_dom,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,superfamily_Moesin_tail,smart_Band_41_domain,prints_Ez/rad/moesin_like,prints_Band_41_fam,pfscan_FERM_domain	-	no_errors	MSN	HGNC	ENSG00000147065				27	0	0.00	28	8	22.22
MSN	0	genome.wustl.edu	37	X	64956743	64956743	+	Missense_Mutation	SNP	A	A	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	X	64956743	64956743	A	G	SNP	MSN	ENST00000360270	human	ensembl	74_37	+1	known	missense	c.1046	p.E349G	1.000	pirsf_ERM,pfam_ERM_C_dom	pirsf_ERM,pfam_ERM_C_dom,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM_N,superfamily_FERM_central,superfamily_Moesin_tail,smart_Band_41_domain,prints_Ez/rad/moesin_like,prints_Band_41_fam,pfscan_FERM_domain	-	no_errors	MSN	HGNC	ENSG00000147065				24	0	0.00	28	8	22.22
MT-CO1	0	genome.wustl.edu	37	MT	5997	5997	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	MT	5997	5997	G	A	SNP	MT-CO1	ENST00000361624	human	ensembl	74_37	+1	known	missense	c.94	p.A32T	NULL	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom,prints_Cyt_c_Oxase_su1	-	no_errors	MT-CO1	HGNC	ENSG00000198804	tier1	-	-	39	0	0.00	5	37	88.10
MTR	0	genome.wustl.edu	37	1	236959022	236959022	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	236959022	236959022	G	T	SNP	MTR	ENST00000366577	human	ensembl	74_37	+1	known	missense	c.19	p.D7Y	0.001	NULL	pfam_S_MeTrfase,pfam_VitB12-dep_Met_synth_activ_dom,pfam_Pterin-binding,pfam_Cbl-bd_cap,pfam_Cobalamin-bd,superfamily_VitB12-dep_Met_synth_activ_dom,superfamily_S_MeTrfase,superfamily_Dihydropteroate_synth-like,superfamily_Cobalamin-bd,superfamily_Cbl-bd_cap,pirsf_MetH,pfscan_VitB12-dep_Met_synth_activ_dom,pfscan_S_MeTrfase,pfscan_Pterin-binding,tigrfam_MetH	-	no_errors	MTR	HGNC	ENSG00000116984	tier1	-	-	96	0	0.00	51	34	40.00
MTRF1L	0	genome.wustl.edu	37	6	153310937	153310937	+	RNA	DEL	A	A	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	153310937	153310937	A	-	DEL	MTRF1L	ENST00000461949	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.168	-	-	-	no_errors	MTRF1L	HGNC	ENSG00000112031	tier1			18	0	0.00	24	4	14.29
MUC16	0	genome.wustl.edu	37	19	9084082	9084082	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	9084082	9084082	G	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.7733	p.P2578Q	0.220	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	101	0	0.00	109	49	31.01
MYH11	0	genome.wustl.edu	37	16	15818261	15818261	+	Silent	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	16	15818261	15818261	G	A	SNP	MYH11	ENST00000396324	human	ensembl	74_37	-1	known	silent	c.4143	p.S1381	0.654	pfam_Myosin_tail	pfam_Myosin_head_motor_dom,pfam_Myosin_tail,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,superfamily_t-SNARE,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	MYH11	HGNC	ENSG00000133392				19	0	0.00	32	3	8.57
MYO18B	0	genome.wustl.edu	37	22	26423370	26423370	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	22	26423370	26423370	C	T	SNP	MYO18B	ENST00000335473	human	ensembl	74_37	+1	known	missense	c.7430	p.T2477M	0.006	NULL	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,superfamily_tRNA-bd_arm,superfamily_Ribosomal_zn-bd,smart_Myosin_head_motor_dom,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO18B	HGNC	ENSG00000133454				41	0	0.00	36	3	7.69
MYOF	0	genome.wustl.edu	37	10	95070368	95070368	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	10	95070368	95070368	G	T	SNP	MYOF	ENST00000359263	human	ensembl	74_37	-1	known	missense	c.5922	p.N1974K	0.993	NULL	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	MYOF	HGNC	ENSG00000138119	tier1	-	-	98	0	0.00	69	56	44.80
NAMPT	0	genome.wustl.edu	37	7	105910715	105910715	+	RNA	SNP	T	T	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	105910715	105910715	T	C	SNP	NAMPT	ENST00000393618	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	NAMPT	HGNC	ENSG00000105835	tier1	-	-	68	0	0.00	71	36	33.64
NAPSA	0	genome.wustl.edu	37	19	50865438	50865438	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	50865438	50865438	G	T	SNP	NAPSA	ENST00000253719	human	ensembl	74_37	-1	known	missense	c.216	p.N72K	0.930	superfamily_Peptidase_aspartic_dom	pfam_Aspartic_peptidase,superfamily_Peptidase_aspartic_dom,prints_Aspartic_peptidase	-	no_errors	NAPSA	HGNC	ENSG00000131400				48	0	0.00	75	4	5.06
NBEAL2	0	genome.wustl.edu	37	3	47045639	47045639	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	47045639	47045639	G	T	SNP	NBEAL2	ENST00000450053	human	ensembl	74_37	+1	known	missense	c.5954	p.R1985L	0.999	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL2	HGNC	ENSG00000160796				54	0	0.00	41	3	6.82
NFASC	0	genome.wustl.edu	37	1	204945917	204945917	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	204945917	204945917	G	A	SNP	NFASC	ENST00000367172	human	ensembl	74_37	+1	known	missense	c.1825	p.V609M	0.991	pfam_Ig_I-set,smart_Ig_sub	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	NFASC	HGNC	ENSG00000163531	tier1	rs113197466	-	26	0	0.00	25	16	39.02
NLGN1	0	genome.wustl.edu	37	3	173525608	173525608	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	173525608	173525608	G	A	SNP	NLGN1	ENST00000401917	human	ensembl	74_37	+1	known	missense	c.752	p.R251Q	1.000	pfam_CarbesteraseB,pfam_AB_hydrolase_3	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Neuroligin	-	no_errors	NLGN1	HGNC	ENSG00000169760				41	0	0.00	37	2	5.13
NOTCH1	0	genome.wustl.edu	37	9	139417576	139417577	+	Frame_Shift_Ins	INS	-	-	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	9	139417576	139417577	-	A	INS	NOTCH1	ENST00000277541	human	ensembl	74_37	-1	known	frame_shift_ins	c.468_467	p.P157fs	1.000:1.000	pfam_EG-like_dom,pfam_EGF_extracell,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pirsf_Notch,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_EGF_extracell,pfam_Notch_NOD_dom,pfam_DUF3454_notch,pfam_Notch_NODP_dom,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,pirsf_Notch,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom,prints_Notch_1,prints_Notch_dom	-	no_errors	NOTCH1	HGNC	ENSG00000148400	tier1			69	0	0.00	31	46	59.74
NR0B1	0	genome.wustl.edu	37	X	30326923	30326923	+	Silent	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	X	30326923	30326923	C	T	SNP	NR0B1	ENST00000378970	human	ensembl	74_37	-1	known	silent	c.558	p.A186	0.034	NULL	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	-	no_errors	NR0B1	HGNC	ENSG00000169297	tier1	-	-	12	0	0.00	2	8	80.00
NSD1	0	genome.wustl.edu	37	5	176696681	176696681	+	Frame_Shift_Del	DEL	C	C	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	176696681	176696681	C	-	DEL	NSD1	ENST00000439151	human	ensembl	74_37	+1	known	frame_shift_del	c.5382	p.P1795fs	0.999	pfam_PWWP_dom,smart_PWWP_dom,pfscan_PWWP_dom	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_PWWP_dom,smart_Znf_PHD,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger	-	no_errors	NSD1	HGNC	ENSG00000165671	tier1			80	0	0.00	20	29	59.18
NTM	0	genome.wustl.edu	37	11	132016295	132016295	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	132016295	132016295	C	T	SNP	NTM	ENST00000539799	human	ensembl	74_37	+1	known	missense	c.287	p.T96M	1.000	pfam_Ig_I-set,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	NTM	HGNC	ENSG00000182667	tier1	-	-	65	0	0.00	30	12	28.57
NUP210L	0	genome.wustl.edu	37	1	154031052	154031052	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	154031052	154031052	G	T	SNP	NUP210L	ENST00000368559	human	ensembl	74_37	-1	known	missense	c.2968	p.L990M	1.000	NULL	pfam_Big_2,superfamily_Invasin/intimin_cell_adhesion,smart_Big_2	-	no_errors	NUP210L	HGNC	ENSG00000143552				38	0	0.00	49	3	5.77
OBSL1	0	genome.wustl.edu	37	2	220432086	220432087	+	Frame_Shift_Del	DEL	CA	CA	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	CA	CA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	220432086	220432087	CA	-	DEL	OBSL1	ENST00000404537	human	ensembl	74_37	-1	known	frame_shift_del	c.1746_1745	p.V582fs	0.998:1.000	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	OBSL1	HGNC	ENSG00000124006	tier1			31	0	0.00	33	9	21.43
OR2M4	0	genome.wustl.edu	37	1	248402987	248402987	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	248402987	248402987	G	T	SNP	OR2M4	ENST00000306687	human	ensembl	74_37	+1	known	missense	c.757	p.G253C	0.373	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2M4	HGNC	ENSG00000171180				43	0	0.00	56	3	5.08
OR2T10	0	genome.wustl.edu	37	1	248756465	248756465	+	Missense_Mutation	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	248756465	248756465	C	A	SNP	OR2T10	ENST00000330500	human	ensembl	74_37	-1	known	missense	c.605	p.C202F	0.005	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2T10	HGNC	ENSG00000184022				35	0	0.00	35	2	5.41
OR51G2	0	genome.wustl.edu	37	11	4936308	4936308	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	4936308	4936308	C	T	SNP	OR51G2	ENST00000322013	human	ensembl	74_37	-1	known	missense	c.586	p.D196N	0.966	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51G2	HGNC	ENSG00000176893	tier1	-	-	16	0	0.00	21	11	34.38
OR5A2	0	genome.wustl.edu	37	11	59189983	59189983	+	Silent	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	59189983	59189983	G	T	SNP	OR5A2	ENST00000302040	human	ensembl	74_37	-1	known	silent	c.444	p.G148	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5A2	HGNC	ENSG00000172324				47	0	0.00	38	3	7.32
OTOP1	0	genome.wustl.edu	37	4	4199591	4199591	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	4	4199591	4199591	C	T	SNP	OTOP1	ENST00000296358	human	ensembl	74_37	-1	known	missense	c.970	p.A324T	0.526	pfam_Otopetrin	pfam_Otopetrin	-	no_errors	OTOP1	HGNC	ENSG00000163982	tier1	rs200213513	-	30	0	0.00	32	23	41.82
PAN3	0	genome.wustl.edu	37	13	28830500	28830502	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	13	28830500	28830502	AGA	-	DEL	PAN3	ENST00000380958	human	ensembl	74_37	+1	known	in_frame_del	c.1072_1074	p.R360in_frame_del	1.000:1.000:1.000	NULL	superfamily_Kinase-like_dom,smart_Znf_CCCH,pfscan_Prot_kinase_dom	-	no_errors	PAN3	HGNC	ENSG00000152520	tier1			108	0	0.00	67	22	24.72
PAPD4	0	genome.wustl.edu	37	5	78981027	78981027	+	Nonsense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	78981027	78981027	G	A	SNP	PAPD4	ENST00000296783	human	ensembl	74_37	+1	known	nonsense	c.1386	p.W462*	1.000	NULL	pfam_PAP_assoc	-	no_errors	PAPD4	HGNC	ENSG00000164329				54	0	0.00	50	3	5.66
PAQR8	0	genome.wustl.edu	37	6	52268714	52268714	+	Missense_Mutation	SNP	T	T	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	52268714	52268714	T	G	SNP	PAQR8	ENST00000360726	human	ensembl	74_37	+1	known	missense	c.703	p.C235G	1.000	pfam_HlyIII-related	pfam_HlyIII-related,superfamily_C-type_lectin_fold	-	no_errors	PAQR8	HGNC	ENSG00000170915	tier1	-	-	22	0	0.00	18	17	48.57
PARD3	0	genome.wustl.edu	37	10	34805981	34805981	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	10	34805981	34805981	G	T	SNP	PARD3	ENST00000374789	human	ensembl	74_37	-1	known	missense	c.329	p.T110N	0.991	pfam_DUF3534	pfam_DUF3534,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	PARD3	HGNC	ENSG00000148498				78	0	0.00	75	4	5.06
PARP10	0	genome.wustl.edu	37	8	145059488	145059488	+	Nonsense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	8	145059488	145059488	G	A	SNP	PARP10	ENST00000313028	human	ensembl	74_37	-1	known	nonsense	c.682	p.R228*	0.977	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP10	HGNC	ENSG00000178685	tier1	-	-	66	0	0.00	37	21	36.21
PATL1	0	genome.wustl.edu	37	11	59423080	59423080	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	59423080	59423080	C	T	SNP	PATL1	ENST00000300146	human	ensembl	74_37	-1	known	missense	c.947	p.R316H	1.000	pfam_Topo_II-assoc_PAT1	pfam_Topo_II-assoc_PAT1	-	no_errors	PATL1	HGNC	ENSG00000166889	tier1	-	-	93	0	0.00	53	37	41.11
PAXIP1	0	genome.wustl.edu	37	7	154774989	154774989	+	Silent	SNP	T	T	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	154774989	154774989	T	A	SNP	PAXIP1	ENST00000397192	human	ensembl	74_37	-1	known	silent	c.378	p.G126	0.033	pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	pfam_BRCT_dom,superfamily_BRCT_dom,smart_BRCT_dom,pfscan_BRCT_dom	-	no_errors	PAXIP1	HGNC	ENSG00000157212	tier1	-	-	97	0	0.00	84	22	20.75
PCDH12	0	genome.wustl.edu	37	5	141324997	141324997	+	Silent	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	141324997	141324997	C	A	SNP	PCDH12	ENST00000231484	human	ensembl	74_37	-1	known	silent	c.3504	p.T1168	0.014	NULL	pfam_Cadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH12	HGNC	ENSG00000113555	tier1	-	-	33	0	0.00	23	4	14.81
PCDHB18	0	genome.wustl.edu	37	5	140616411	140616411	+	RNA	SNP	A	A	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	140616411	140616411	A	G	SNP	PCDHB18	ENST00000526308	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	PCDHB18	HGNC	ENSG00000146001	tier1	-	-	98	0	0.00	76	44	36.67
PCLO	0	genome.wustl.edu	37	7	82584500	82584500	+	Silent	SNP	A	A	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	82584500	82584500	A	G	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	silent	c.5769	p.H1923	0.339	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	42	0	0.00	72	25	25.77
PDCD11	0	genome.wustl.edu	37	10	105179338	105179338	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	10	105179338	105179338	G	A	SNP	PDCD11	ENST00000369797	human	ensembl	74_37	+1	known	missense	c.2150	p.G717D	1.000	NULL	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_Suf,superfamily_NA-bd_OB-fold,smart_RNA-binding_domain_S1,smart_HAT,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom,prints_Ribosomal_S1	-	no_errors	PDCD11	HGNC	ENSG00000148843	tier1	-	-	56	0	0.00	52	4	7.14
PDIA3	0	genome.wustl.edu	37	15	44038854	44038854	+	Silent	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	15	44038854	44038854	C	T	SNP	PDIA3	ENST00000300289	human	ensembl	74_37	+1	known	silent	c.117	p.I39	0.998	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,tigrfam_Prot_disulphide_isomerase,tigrfam_Disulphide_isomerase	pfam_Thioredoxin_domain,superfamily_Thioredoxin-like_fold,prints_Thioredoxin,tigrfam_Prot_disulphide_isomerase,tigrfam_Disulphide_isomerase	-	no_errors	PDIA3	HGNC	ENSG00000167004	tier1	-	-	61	0	0.00	53	19	26.39
PEX16	0	genome.wustl.edu	37	11	45935479	45935479	+	Silent	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	45935479	45935479	G	A	SNP	PEX16	ENST00000241041	human	ensembl	74_37	-1	known	silent	c.778	p.L260	1.000	pfam_Pex16	pfam_Pex16	-	no_errors	PEX16	HGNC	ENSG00000121680	tier1	-	-	81	0	0.00	60	31	34.07
PFKFB4	0	genome.wustl.edu	37	3	48561150	48561150	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	48561150	48561150	G	T	SNP	PFKFB4	ENST00000232375	human	ensembl	74_37	-1	known	missense	c.1206	p.F402L	1.000	pirsf_Bifunct_6PFK/fruc_bisP_Ptase	pfam_6Phosfructo_kin,pfam_His_Pase_superF_clade-1,superfamily_P-loop_NTPase,smart_His_Pase_superF_clade-1,pirsf_Bifunct_6PFK/fruc_bisP_Ptase,prints_6Pfruct_kin	-	no_errors	PFKFB4	HGNC	ENSG00000114268	tier1	-	-	42	0	0.00	29	16	35.56
PIFO	0	genome.wustl.edu	37	1	111892705	111892705	+	RNA	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	111892705	111892705	G	T	SNP	PIFO	ENST00000484512	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	PIFO	HGNC	ENSG00000173947	tier1	-	-	64	0	0.00	56	8	12.50
PIK3C2B	0	genome.wustl.edu	37	1	204438822	204438822	+	Missense_Mutation	SNP	G	G	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	204438822	204438822	G	C	SNP	PIK3C2B	ENST00000367187	human	ensembl	74_37	-1	known	missense	c.109	p.L37V	1.000	NULL	pfam_PI3/4_kinase_cat_dom,pfam_PInositide-3_kin_accessory_dom,pfam_PI3K_C2_dom,pfam_PI3K_Ras-bd_dom,pfam_Phox,pfam_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,superfamily_Phox,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,smart_Phox,smart_C2_dom,pfscan_C2_dom,pfscan_Phox,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C2B	HGNC	ENSG00000133056	tier1	-	-	77	0	0.00	37	27	42.19
PIK3C3	0	genome.wustl.edu	37	18	39550410	39550410	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	18	39550410	39550410	G	A	SNP	PIK3C3	ENST00000262039	human	ensembl	74_37	+1	known	missense	c.521	p.R174H	1.000	pfam_PI3K_C2_dom,pirsf_PI3K_Vps34	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pirsf_PI3K_Vps34,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3C3	HGNC	ENSG00000078142	tier1	-	-	39	0	0.00	26	13	33.33
PIK3CA	0	genome.wustl.edu	37	3	178936091	178936091	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	178936091	178936091	G	A	SNP	PIK3CA	ENST00000263967	human	ensembl	74_37	+1	known	missense	c.1633	p.E545K	1.000	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_Ras-bd_dom,pfam_PI3K_C2_dom,pfam_PI3K_adapt-bd_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_adapt-bd_dom,smart_PI3K_Ras-bd_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PIK3CA	HGNC	ENSG00000121879	tier1	rs104886003	-	63	0	0.00	61	27	30.68
PIP	0	genome.wustl.edu	37	7	142832382	142832382	+	Missense_Mutation	SNP	A	A	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	142832382	142832382	A	G	SNP	PIP	ENST00000291009	human	ensembl	74_37	+1	known	missense	c.191	p.E64G	0.965	pfam_SV_autoAg,pirsf_SV_autoAg	pfam_SV_autoAg,pirsf_SV_autoAg	-	no_errors	PIP	HGNC	ENSG00000159763	tier1	-	-	53	0	0.00	41	40	49.38
PLTP	0	genome.wustl.edu	37	20	44528111	44528111	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	20	44528111	44528111	G	A	SNP	PLTP	ENST00000542937	human	ensembl	74_37	-1	known	missense	c.1409	p.T470M	0.721	pfam_Lipid-bd_serum_glycop_C,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_C	pfam_Lipid-bd_serum_glycop_C,pfam_Lipid-bd_serum_glycop_N,superfamily_Bactericidal_perm-incr_a/b_dom,smart_Lipid-bd_serum_glycop_N,smart_Lipid-bd_serum_glycop_C	-	no_errors	PLTP	HGNC	ENSG00000100979	tier1	-	-	48	0	0.00	41	4	8.89
PLVAP	0	genome.wustl.edu	37	19	17476376	17476376	+	Nonsense_Mutation	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	17476376	17476376	C	A	SNP	PLVAP	ENST00000252590	human	ensembl	74_37	-1	known	nonsense	c.898	p.E300*	0.978	pfam_PV-1	pfam_PV-1	-	no_errors	PLVAP	HGNC	ENSG00000130300	tier1	-	-	37	0	0.00	40	16	28.57
PLXDC1	0	genome.wustl.edu	37	17	37288020	37288020	+	RNA	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	17	37288020	37288020	G	T	SNP	PLXDC1	ENST00000493200	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	PLXDC1	HGNC	ENSG00000161381	tier1	-	-	73	0	0.00	34	52	60.47
PNLDC1	0	genome.wustl.edu	37	6	160225082	160225082	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	160225082	160225082	G	T	SNP	PNLDC1	ENST00000610273	human	ensembl	74_37	+1	known	missense	c.301	p.V101F	0.998	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	pfam_RNase_CAF1,superfamily_RNaseH-like_dom	-	no_errors	PNLDC1	HGNC	ENSG00000146453	tier1	-	-	63	0	0.00	61	4	6.15
POLR1C	0	genome.wustl.edu	37	6	43487822	43487825	+	Frame_Shift_Del	DEL	AGAT	AGAT	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	AGAT	AGAT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	43487822	43487825	AGAT	-	DEL	POLR1C	ENST00000372389	human	ensembl	74_37	+1	known	frame_shift_del	c.401_404	p.D136fs	1.000:0.999:1.000:1.000	pfam_DNA-dir_RNA_pol_insert,pfam_RBP11-like_dimer,superfamily_RBP11-like_dimer,superfamily_DNA-dir_RNA_pol_insert,smart_DNA-dir_RNA_pol_RpoA/D/Rpb3	pfam_DNA-dir_RNA_pol_insert,pfam_RBP11-like_dimer,superfamily_RBP11-like_dimer,superfamily_DNA-dir_RNA_pol_insert,smart_DNA-dir_RNA_pol_RpoA/D/Rpb3	-	no_errors	POLR1C	HGNC	ENSG00000171453	tier1			62	0	0.00	49	18	26.87
POU4F1	0	genome.wustl.edu	37	13	79176484	79176486	+	In_Frame_Del	DEL	TGG	TGG	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	TGG	TGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	13	79176484	79176486	TGG	-	DEL	POU4F1	ENST00000377208	human	ensembl	74_37	-1	known	in_frame_del	c.326_324	p.H108in_frame_del	1.000:1.000:1.000	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F1	HGNC	ENSG00000152192	tier1			9	0	0.00	4	2	33.33
POU4F2	0	genome.wustl.edu	37	4	147560493	147560493	+	Silent	SNP	A	A	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	4	147560493	147560493	A	C	SNP	POU4F2	ENST00000281321	human	ensembl	74_37	+1	known	silent	c.201	p.G67	0.938	NULL	pfam_POU_specific,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,smart_POU_specific,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_POU_specific,prints_POU	-	no_errors	POU4F2	HGNC	ENSG00000151615				32	0	0.00	41	5	10.87
PPP1R9A	0	genome.wustl.edu	37	7	94855331	94855331	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	94855331	94855331	G	T	SNP	PPP1R9A	ENST00000289495	human	ensembl	74_37	+1	known	missense	c.1949	p.S650I	0.801	NULL	pfam_SAM_2,pfam_SAM_type1,pfam_PDZ,superfamily_PDZ,superfamily_SAM/pointed,superfamily_Smac_DIABLO-like,smart_PDZ,smart_SAM,pfscan_PDZ,pfscan_SAM	-	no_errors	PPP1R9A	HGNC	ENSG00000158528	tier1	-	-	40	0	0.00	70	4	5.41
PRB3	0	genome.wustl.edu	37	12	11420862	11420862	+	Silent	SNP	T	T	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	12	11420862	11420862	T	G	SNP	PRB3	ENST00000381842	human	ensembl	74_37	-1	known	silent	c.321	p.G107	0.001	NULL	NULL	-	no_errors	PRB3	HGNC	ENSG00000197870				50	0	0.00	46	4	8.00
PRDM8	0	genome.wustl.edu	37	4	81122551	81122551	+	Silent	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	4	81122551	81122551	C	T	SNP	PRDM8	ENST00000339711	human	ensembl	74_37	+1	known	silent	c.327	p.N109	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PRDM8	HGNC	ENSG00000152784	tier1	-	-	44	0	0.00	29	29	50.00
PRDM9	0	genome.wustl.edu	37	5	23526880	23526880	+	Silent	SNP	T	T	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	23526880	23526880	T	C	SNP	PRDM9	ENST00000296682	human	ensembl	74_37	+1	known	silent	c.1683	p.F561	0.629	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_SSXRD_motif,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	PRDM9	HGNC	ENSG00000164256	tier1	-	-	114	0	0.00	64	34	34.34
PRKDC	0	genome.wustl.edu	37	8	48841652	48841653	+	Frame_Shift_Del	DEL	CT	CT	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	CT	CT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	8	48841652	48841653	CT	-	DEL	PRKDC	ENST00000314191	human	ensembl	74_37	-1	known	frame_shift_del	c.2139_2138	p.E713fs	1.000:1.000	superfamily_ARM-type_fold	pfam_NUC194,pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,pfam_FATC,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	PRKDC	HGNC	ENSG00000253729	tier1			107	0	0.00	150	34	18.48
PSMA3	0	genome.wustl.edu	37	14	58724482	58724482	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	14	58724482	58724482	C	T	SNP	PSMA3	ENST00000216455	human	ensembl	74_37	+1	known	missense	c.248	p.A83V	1.000	pfam_Proteasome_sua/b	pfam_Proteasome_sua/b,pfam_Proteasome_asu_N,smart_Proteasome_asu_N	-	no_errors	PSMA3	HGNC	ENSG00000100567	tier1	-	-	55	0	0.00	69	4	5.48
PTK2B	0	genome.wustl.edu	37	8	27277410	27277412	+	Splice_Site	DEL	AGG	AGG	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	AGG	AGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	8	27277410	27277412	AGG	-	DEL	PTK2B	ENST00000346049	human	ensembl	74_37	+1	known	splice_site_del	c.205-2_205-1	e2-1	0.992:1.000:1.000	-	-	-	no_errors	PTK2B	HGNC	ENSG00000120899	tier1			33	0	0.00	39	9	18.75
PTPRG	0	genome.wustl.edu	37	3	62229529	62229529	+	Silent	SNP	T	T	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	62229529	62229529	T	C	SNP	PTPRG	ENST00000474889	human	ensembl	74_37	+1	known	silent	c.2424	p.P808	0.991	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Carbonic_anhydrase_a,pfam_Fibronectin_type3,superfamily_Carbonic_anhydrase_a,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Carbonic_anhydrase_a,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRG	HGNC	ENSG00000144724	tier1	-	-	89	0	0.00	61	39	39.00
PTPRO	0	genome.wustl.edu	37	12	15734642	15734642	+	Silent	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	12	15734642	15734642	G	T	SNP	PTPRO	ENST00000281171	human	ensembl	74_37	+1	known	silent	c.3162	p.T1054	0.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt	-	no_errors	PTPRO	HGNC	ENSG00000151490				35	0	0.00	52	3	5.45
PTPRS	0	genome.wustl.edu	37	19	5212059	5212059	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	5212059	5212059	C	T	SNP	PTPRS	ENST00000372412	human	ensembl	74_37	-1	known	missense	c.4975	p.A1659T	0.991	NULL	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_Fibronectin_type3,pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,prints_Tyr_Pase_rcpt/non-rcpt,pfscan_Fibronectin_type3,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom	-	no_errors	PTPRS	HGNC	ENSG00000105426				45	0	0.00	61	4	6.15
RAB11A	0	genome.wustl.edu	37	15	66180064	66180064	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	15	66180064	66180064	G	A	SNP	RAB11A	ENST00000435304	human	ensembl	74_37	+1	known	missense	c.442	p.A148T	1.000	superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB11A	HGNC	ENSG00000103769				37	0	0.00	41	4	8.89
RAMP1	0	genome.wustl.edu	37	2	238785925	238785925	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	238785925	238785925	G	A	SNP	RAMP1	ENST00000254661	human	ensembl	74_37	+1	known	missense	c.112	p.E38K	0.048	pfam_RAMP	pfam_RAMP	-	no_errors	RAMP1	HGNC	ENSG00000132329	tier1	-	-	52	0	0.00	32	40	55.56
RARS	0	genome.wustl.edu	37	5	167933162	167933162	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	167933162	167933162	G	T	SNP	RARS	ENST00000231572	human	ensembl	74_37	+1	known	missense	c.1194	p.E398D	1.000	pfam_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-ligase_Ia	pfam_Arg-tRNA-synth_Ia_core,pfam_DALR_anticod-bd,pfam_Arg-tRNA-synth_N,superfamily_tRNAsynth_1a_anticodon-bd,superfamily_Arg-tRNA-synth_N,smart_DALR_anticod-bd,prints_Arg-tRNA-synth_Ia_core,tigrfam_Arg-tRNA-ligase_Ia	-	no_errors	RARS	HGNC	ENSG00000113643	tier1	-	-	75	0	0.00	71	4	5.33
REXO1	0	genome.wustl.edu	37	19	1828269	1828269	+	Silent	SNP	A	A	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	1828269	1828269	A	C	SNP	REXO1	ENST00000170168	human	ensembl	74_37	-1	known	silent	c.519	p.P173	0.000	NULL	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	REXO1	HGNC	ENSG00000079313	tier1	-	-	39	0	0.00	19	26	54.17
RGAG4	0	genome.wustl.edu	37	X	71350845	71350845	+	Frame_Shift_Del	DEL	G	G	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	X	71350845	71350845	G	-	DEL	RGAG4	ENST00000479991	human	ensembl	74_37	-1	known	frame_shift_del	c.546	p.G184fs	0.307	NULL	pfam_Retrotrans_gag_dom	-	no_errors	RGAG4	HGNC	ENSG00000242732	tier1			35	0	0.00	37	2	5.13
RGS19	0	genome.wustl.edu	37	20	62705859	62705859	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	20	62705859	62705859	C	T	SNP	RGS19	ENST00000332298	human	ensembl	74_37	-1	known	missense	c.188	p.R63Q	0.479	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam,prints_RGS_dom	-	no_errors	RGS19	HGNC	ENSG00000171700	tier1	-	-	35	0	0.00	25	15	36.59
ROR1	0	genome.wustl.edu	37	1	64643832	64643832	+	Missense_Mutation	SNP	A	A	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	64643832	64643832	A	G	SNP	ROR1	ENST00000371079	human	ensembl	74_37	+1	known	missense	c.2108	p.E703G	1.000	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pirsf_Tyr_kinase_rcpt_ROR,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,pfam_Kringle,pfam_Frizzled_dom,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,superfamily_Kinase-like_dom,superfamily_Kringle-like,superfamily_Frizzled_dom,smart_Ig_sub,smart_Ig_sub2,smart_Kringle,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_Frizzled_dom,pfscan_Kringle,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	ROR1	HGNC	ENSG00000185483	tier1	-	-	27	0	0.00	16	6	27.27
SCRT1	0	genome.wustl.edu	37	8	145559791	145559791	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	8	145559791	145559791	G	A	SNP	SCRT1	ENST00000332135	human	ensembl	74_37	-1	known	missense	c.41	p.A14V	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	SCRT1	HGNC	ENSG00000170616	tier1	-	-	111	0	0.00	71	19	20.88
SDCBP	0	genome.wustl.edu	37	8	59484765	59484765	+	Silent	SNP	T	T	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	8	59484765	59484765	T	C	SNP	SDCBP	ENST00000260130	human	ensembl	74_37	+1	known	silent	c.132	p.N44	0.962	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SDCBP	HGNC	ENSG00000137575	tier1	-	-	60	0	0.00	86	36	29.51
SEPT4	0	genome.wustl.edu	37	17	56603935	56603938	+	RNA	DEL	ACAC	ACAC	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	ACAC	ACAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	17	56603935	56603938	ACAC	-	DEL	SEPT4	ENST00000580740	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000:0.000:0.000	-	-	-	no_errors	SEPT4	HGNC	ENSG00000108387	tier1			9	0	0.00	17	2	10.53
SETD2	0	genome.wustl.edu	37	3	47165518	47165519	+	Frame_Shift_Del	DEL	GA	GA	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	GA	GA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	47165518	47165519	GA	-	DEL	SETD2	ENST00000409792	human	ensembl	74_37	-1	known	frame_shift_del	c.608_607	p.S203fs	0.025:0.018	NULL	pfam_SRI,pfam_SET_dom,pfam_WW_dom,superfamily_WW_dom,superfamily_Ferritin-like_SF,smart_AWS,smart_SET_dom,smart_Post-SET_dom,smart_WW_dom,pfscan_AWS,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_WW_dom	-	no_errors	SETD2	HGNC	ENSG00000181555	tier1			65	0	0.00	58	18	23.68
SETDB1	0	genome.wustl.edu	37	1	150923484	150923484	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	150923484	150923484	C	T	SNP	SETDB1	ENST00000271640	human	ensembl	74_37	+1	known	missense	c.2131	p.R711C	1.000	pfam_Pre-SET_dom,smart_Pre-SET_Zn-bd_sub	pfam_SET_dom,pfam_Pre-SET_dom,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Tudor,smart_Methyl_CpG_DNA-bd,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Methyl_CpG_DNA-bd,pfscan_SET_dom,pfscan_Pre-SET_dom,pfscan_Post-SET_dom	-	no_errors	SETDB1	HGNC	ENSG00000143379	tier1	-	-	55	0	0.00	55	4	6.78
SETDB1	0	genome.wustl.edu	37	1	150936765	150936765	+	Silent	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	150936765	150936765	C	T	SNP	SETDB1	ENST00000271640	human	ensembl	74_37	+1	known	silent	c.3801	p.Y1267	0.464	smart_SET_dom,pfscan_SET_dom	pfam_SET_dom,pfam_Pre-SET_dom,pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Tudor,smart_Methyl_CpG_DNA-bd,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_Methyl_CpG_DNA-bd,pfscan_SET_dom,pfscan_Pre-SET_dom,pfscan_Post-SET_dom	-	no_errors	SETDB1	HGNC	ENSG00000143379	tier1	-	-	97	0	0.00	69	36	34.29
SETMAR	0	genome.wustl.edu	37	3	4357930	4357930	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	4357930	4357930	G	T	SNP	SETMAR	ENST00000358065	human	ensembl	74_37	+1	known	missense	c.1055	p.R352L	0.853	NULL	pfam_Transposase_1,pfam_SET_dom,pfam_Pre-SET_dom,pfam_Transposase_Tc1-like,pfam_Transposase_14,superfamily_Homeodomain-like,smart_Pre-SET_Zn-bd_sub,smart_SET_dom,pfscan_SET_dom,pfscan_Pre-SET_dom,pfscan_Post-SET_dom	-	no_errors	SETMAR	HGNC	ENSG00000170364	tier1	-	-	21	0	0.00	19	4	17.39
SH2D4A	0	genome.wustl.edu	37	8	19250858	19250860	+	In_Frame_Del	DEL	CTT	CTT	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	CTT	CTT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	8	19250858	19250860	CTT	-	DEL	SH2D4A	ENST00000265807	human	ensembl	74_37	+1	known	in_frame_del	c.1078_1080	p.L362in_frame_del	0.962:0.910:0.510	pfam_SH2,smart_SH2,pfscan_SH2	pfam_SH2,smart_SH2,pfscan_SH2	-	no_errors	SH2D4A	HGNC	ENSG00000104611	tier1			68	0	0.00	62	30	32.61
SIM1	0	genome.wustl.edu	37	6	100838305	100838305	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	100838305	100838305	G	T	SNP	SIM1	ENST00000262901	human	ensembl	74_37	-1	known	missense	c.2233	p.L745M	1.000	NULL	pfam_SIM_C,pfam_PAS_fold_3,pfam_PAS_fold,pfam_bHLH_dom,superfamily_PAS,superfamily_bHLH_dom,smart_bHLH_dom,smart_PAS,smart_PAC,pfscan_PAS,pfscan_bHLH_dom	-	no_errors	SIM1	HGNC	ENSG00000112246	tier1	-	-	89	0	0.00	69	34	33.01
SLC39A11	0	genome.wustl.edu	37	17	70643714	70643714	+	RNA	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	17	70643714	70643714	G	A	SNP	SLC39A11	ENST00000579988	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC39A11	HGNC	ENSG00000133195	tier1	-	-	58	0	0.00	72	27	27.27
SLC4A9	0	genome.wustl.edu	37	5	139745542	139745545	+	Frame_Shift_Del	DEL	CTTA	CTTA	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	CTTA	CTTA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	139745542	139745545	CTTA	-	DEL	SLC4A9	ENST00000230993	human	ensembl	74_37	+1	known	frame_shift_del	c.1906_1909	p.T637fs	1.000:1.000:0.995:1.000	pfam_HCO3_transpt_C,tigrfam_HCO3_transpt_euk	pfam_HCO3_transpt_C,pfam_Band3_cytoplasmic_dom,superfamily_PTrfase/Anion_transptr,prints_HCO3_transpt_euk,prints_Na/HCO3_transpt,tigrfam_HCO3_transpt_euk	-	no_errors	SLC4A9	HGNC	ENSG00000113073	tier1			46	0	0.00	37	6	13.95
SLU7	0	genome.wustl.edu	37	5	159840617	159840617	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	159840617	159840617	C	T	SNP	SLU7	ENST00000297151	human	ensembl	74_37	-1	known	missense	c.416	p.R139Q	1.000	NULL	pfam_Slu7,superfamily_Znf_CCHC	-	no_errors	SLU7	HGNC	ENSG00000164609	tier1	-	-	40	0	0.00	34	23	40.35
SMARCA4	0	genome.wustl.edu	37	19	11123693	11123693	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	11123693	11123693	G	T	SNP	SMARCA4	ENST00000358026	human	ensembl	74_37	+1	known	missense	c.2343	p.M781I	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_Bromodomain,pfam_BRK_domain,pfam_Helicase/SANT-assoc_DNA-bd,pfam_Helicase_C,pfam_Gln-Leu-Gln_QLQ,superfamily_P-loop_NTPase,superfamily_Bromodomain,smart_Gln-Leu-Gln_QLQ,smart_HAS_subgr,smart_BRK_domain,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Bromodomain,prints_Bromodomain,pfscan_Helicase/SANT-assoc_DNA-bd,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Bromodomain	-	no_errors	SMARCA4	HGNC	ENSG00000127616	tier1	-	-	44	0	0.00	43	13	23.21
SMARCA5	0	genome.wustl.edu	37	4	144449849	144449849	+	Missense_Mutation	SNP	T	T	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	4	144449849	144449849	T	A	SNP	SMARCA5	ENST00000283131	human	ensembl	74_37	+1	known	missense	c.1071	p.D357E	1.000	pfam_SNF2_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,pfscan_Helicase_ATP-bd	pfam_SNF2_N,pfam_SLIDE,pfam_ISWI_HAND-dom,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_HDA_complex_subunit-2/3,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Homeodomain-like,superfamily_ISWI_HAND-dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_SANT/Myb,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	SMARCA5	HGNC	ENSG00000153147	tier1	-	-	91	0	0.00	19	59	75.64
SNX5	0	genome.wustl.edu	37	20	17928184	17928184	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	20	17928184	17928184	G	T	SNP	SNX5	ENST00000377759	human	ensembl	74_37	-1	known	missense	c.1024	p.H342N	1.000	pfam_Vps5_C,pirsf_Snx5_Snx6	pfam_Phox,pfam_Vps5_C,superfamily_Phox,pirsf_Snx5_Snx6,pfscan_Phox	-	no_errors	SNX5	HGNC	ENSG00000089006				78	0	0.00	72	4	5.26
SOX6	0	genome.wustl.edu	37	11	16077436	16077436	+	Silent	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	16077436	16077436	G	T	SNP	SOX6	ENST00000352083	human	ensembl	74_37	-1	known	silent	c.1113	p.A371	0.987	NULL	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX6	HGNC	ENSG00000110693	tier1	-	-	84	0	0.00	68	4	5.48
SOX9	0	genome.wustl.edu	37	17	70117939	70117939	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	17	70117939	70117939	G	A	SNP	SOX9	ENST00000245479	human	ensembl	74_37	+1	known	missense	c.407	p.S136N	1.000	pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_Sox_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	SOX9	HGNC	ENSG00000125398	tier1	-	-	81	0	0.00	51	64	55.65
SSH3	0	genome.wustl.edu	37	11	67075317	67075317	+	Silent	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	67075317	67075317	G	A	SNP	SSH3	ENST00000308127	human	ensembl	74_37	+1	known	silent	c.792	p.G264	1.000	NULL	pfam_Dual-sp_phosphatase_cat-dom,pfam_DEK_C,smart_Dual-sp_phosphatase_subgr_cat,pfscan_Tyr/Dual-sp_Pase,pfscan_Dual-sp_phosphatase_subgr_cat	-	no_errors	SSH3	HGNC	ENSG00000172830	tier1	-	-	61	0	0.00	47	17	26.56
ST6GAL2	0	genome.wustl.edu	37	2	107449090	107449090	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	107449090	107449090	G	T	SNP	ST6GAL2	ENST00000361686	human	ensembl	74_37	-1	known	missense	c.1074	p.D358E	0.999	pfam_Glyco_trans_29,superfamily_Glyco_hydro/deAcase_b/a-brl	pfam_Glyco_trans_29,superfamily_Glyco_hydro/deAcase_b/a-brl	-	no_errors	ST6GAL2	HGNC	ENSG00000144057	tier1	-	-	78	0	0.00	58	66	53.23
ST8SIA4	0	genome.wustl.edu	37	5	100192077	100192077	+	Missense_Mutation	SNP	T	T	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	100192077	100192077	T	A	SNP	ST8SIA4	ENST00000231461	human	ensembl	74_37	-1	known	missense	c.527	p.E176V	1.000	pfam_Glyco_trans_29,pirsf_Sialyl_trans	pfam_Glyco_trans_29,pirsf_Sialyl_trans	-	no_errors	ST8SIA4	HGNC	ENSG00000113532	tier1	-	-	42	0	0.00	22	12	35.29
STAG3	0	genome.wustl.edu	37	7	99795228	99795228	+	RNA	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	99795228	99795228	G	T	SNP	STAG3	ENST00000440830	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	STAG3	HGNC	ENSG00000066923	tier1	rs2405730	-	39	0	0.00	69	6	8.00
SULT1A1	0	genome.wustl.edu	37	16	28617217	28617217	+	Silent	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	16	28617217	28617217	C	T	SNP	SULT1A1	ENST00000314752	human	ensembl	74_37	-1	known	silent	c.813	p.A271	0.992	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	pfam_Sulfotransferase_dom,superfamily_P-loop_NTPase	-	no_errors	SULT1A1	HGNC	ENSG00000196502	tier1	rs202065838	-	56	0	0.00	60	20	25.00
SYCE3	0	genome.wustl.edu	37	22	50989685	50989685	+	Missense_Mutation	SNP	G	G	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	22	50989685	50989685	G	C	SNP	SYCE3	ENST00000402753	human	ensembl	74_37	-1	putative	missense	c.256	p.Q86E	0.966	NULL	NULL	-	no_errors	SYCE3	HGNC	ENSG00000217442	tier1	-	-	35	0	0.00	40	19	32.20
TARM1	0	genome.wustl.edu	37	19	54584606	54584606	+	Missense_Mutation	SNP	T	T	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	54584606	54584606	T	C	SNP	TARM1	ENST00000432826	human	ensembl	74_37	-1	known	missense	c.4	p.I2V	0.098	NULL	smart_Ig_sub	-	no_errors	TARM1	HGNC	ENSG00000248385				74	0	0.00	71	4	5.33
TAS2R50	0	genome.wustl.edu	37	12	11138968	11138968	+	Silent	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	12	11138968	11138968	C	T	SNP	TAS2R50	ENST00000506868	human	ensembl	74_37	-1	known	silent	c.492	p.G164	0.001	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R50	HGNC	ENSG00000212126	tier1	-	-	43	0	0.00	72	4	5.26
TBL1XR1	0	genome.wustl.edu	37	3	176755901	176755901	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	176755901	176755901	G	T	SNP	TBL1XR1	ENST00000430069	human	ensembl	74_37	-1	known	missense	c.1107	p.D369E	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,pfam_LisH_dimerisation_subgr,superfamily_WD40_repeat_dom,smart_LisH_dimerisation,smart_WD40_repeat,pfscan_LisH_dimerisation,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	TBL1XR1	HGNC	ENSG00000177565	tier1	-	-	51	0	0.00	53	19	26.39
TCHH	0	genome.wustl.edu	37	1	152085342	152085342	+	Missense_Mutation	SNP	T	T	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	152085342	152085342	T	G	SNP	TCHH	ENST00000368804	human	ensembl	74_37	-1	known	missense	c.351	p.E117D	0.985	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	TCHH	HGNC	ENSG00000159450	tier1	-	-	67	0	0.00	39	16	29.09
TCHHL1	0	genome.wustl.edu	37	1	152058560	152058560	+	Missense_Mutation	SNP	T	T	C			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	152058560	152058560	T	C	SNP	TCHHL1	ENST00000368806	human	ensembl	74_37	-1	known	missense	c.1598	p.E533G	0.006	NULL	pfam_S100_Ca-bd_sub	-	no_errors	TCHHL1	HGNC	ENSG00000182898				28	0	0.00	51	4	7.27
TENM2	0	genome.wustl.edu	37	5	167420177	167420177	+	Silent	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	167420177	167420177	G	T	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	silent	c.1176	p.A392	0.000	NULL	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934				65	0	0.00	57	3	5.00
TESC	0	genome.wustl.edu	37	12	117484586	117484586	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	12	117484586	117484586	C	T	SNP	TESC	ENST00000392545	human	ensembl	74_37	-1	known	missense	c.566	p.R189Q	1.000	smart_EF_hand_dom,pfscan_EF_hand_dom	smart_EF_hand_dom,pfscan_EF_hand_dom	-	no_errors	TESC	HGNC	ENSG00000088992	tier1	-	-	63	0	0.00	34	16	32.00
TEX11	0	genome.wustl.edu	37	X	69898668	69898668	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	X	69898668	69898668	C	T	SNP	TEX11	ENST00000344304	human	ensembl	74_37	-1	known	missense	c.1273	p.A425T	0.080	pfam_Meiosis_specific_SPO22,smart_TPR_repeat	pfam_Meiosis_specific_SPO22,smart_TPR_repeat	-	no_errors	TEX11	HGNC	ENSG00000120498	tier1	-	-	92	0	0.00	38	79	67.52
TFAP2B	0	genome.wustl.edu	37	6	50791203	50791203	+	Silent	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	6	50791203	50791203	G	A	SNP	TFAP2B	ENST00000263046	human	ensembl	74_37	+1	known	silent	c.192	p.P64	0.935	NULL	pfam_TF_AP2_C,prints_TF_AP2_beta,prints_TF_AP2_C	-	no_errors	TFAP2B	HGNC	ENSG00000008196	tier1	-	-	48	0	0.00	32	19	37.25
TFIP11	0	genome.wustl.edu	37	22	26888021	26888021	+	Nonsense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	22	26888021	26888021	C	T	SNP	TFIP11	ENST00000405938	human	ensembl	74_37	-1	known	nonsense	c.2472	p.W824*	1.000	NULL	pfam_GCFC_dom,pfam_TIP_N,pfam_G_patch_dom,smart_G_patch_dom,pfscan_G_patch_dom	-	no_errors	TFIP11	HGNC	ENSG00000100109				31	0	0.00	42	4	8.70
TIAM1	0	genome.wustl.edu	37	21	32502599	32502599	+	Missense_Mutation	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	21	32502599	32502599	C	A	SNP	TIAM1	ENST00000286827	human	ensembl	74_37	-1	known	missense	c.3977	p.W1326L	1.000	smart_Pleckstrin_homology	pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Raf-like_ras-bd,pfam_PDZ,superfamily_DH-domain,superfamily_PDZ,smart_Pleckstrin_homology,smart_Raf-like_ras-bd,smart_PDZ,smart_DH-domain,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_Raf-like_ras-bd,pfscan_DH-domain	-	no_errors	TIAM1	HGNC	ENSG00000156299	tier1	-	-	37	0	0.00	23	10	30.30
TIMELESS	0	genome.wustl.edu	37	12	56817430	56817430	+	Silent	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	12	56817430	56817430	C	T	SNP	TIMELESS	ENST00000553532	human	ensembl	74_37	-1	known	silent	c.2028	p.E676	0.994	NULL	pfam_TIMELESS_C,pfam_Timeless	-	no_errors	TIMELESS	HGNC	ENSG00000111602				23	0	0.00	22	4	15.38
TLN1	0	genome.wustl.edu	37	9	35700018	35700018	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	9	35700018	35700018	G	A	SNP	TLN1	ENST00000314888	human	ensembl	74_37	-1	known	missense	c.6721	p.R2241W	1.000	NULL	pfam_Talin_cent,pfam_Vinculin-bd_dom,pfam_ILWEQ_dom,pfam_FERM_N,pfam_FERM_central,pfam_Insln_rcpt_S1,superfamily_Talin_cent,superfamily_Vinculin/catenin,superfamily_FERM_central,smart_Band_41_domain,smart_ILWEQ_dom,pfscan_FERM_domain,pfscan_ILWEQ_dom	-	no_errors	TLN1	HGNC	ENSG00000137076	tier1	-	-	55	0	0.00	23	11	32.35
TMEM176B	0	genome.wustl.edu	37	7	150490688	150490688	+	Missense_Mutation	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	150490688	150490688	C	A	SNP	TMEM176B	ENST00000326442	human	ensembl	74_37	-1	known	missense	c.316	p.V106L	0.708	pfam_CD20-like,superfamily_MFS_dom_general_subst_transpt	pfam_CD20-like,superfamily_MFS_dom_general_subst_transpt	-	no_errors	TMEM176B	HGNC	ENSG00000106565	tier1	-	-	27	0	0.00	26	18	40.91
TNR	0	genome.wustl.edu	37	1	175365941	175365941	+	Missense_Mutation	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	175365941	175365941	C	A	SNP	TNR	ENST00000263525	human	ensembl	74_37	-1	known	missense	c.979	p.A327S	1.000	superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Fibronectin_type3,pfam_Fibrinogen_a/b/g_C_dom,pfam_EGF_extracell,superfamily_Fibrinogen_a/b/g_C_dom,superfamily_Fibronectin_type3,smart_EG-like_dom,smart_Fibronectin_type3,smart_Fibrinogen_a/b/g_C_dom,pfscan_Fibronectin_type3	-	no_errors	TNR	HGNC	ENSG00000116147	tier1	-	-	34	0	0.00	20	12	37.50
TPK1	0	genome.wustl.edu	37	7	144288333	144288333	+	RNA	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	144288333	144288333	C	A	SNP	TPK1	ENST00000548831	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	TPK1	HGNC	ENSG00000196511	tier1	-	-	10	0	0.00	1	5	83.33
TRIL	0	genome.wustl.edu	37	7	28997167	28997167	+	RNA	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	28997167	28997167	C	T	SNP	TRIL	ENST00000322982	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.684	-	-	-	no_errors	TRIL	HGNC	ENSG00000176734	tier1	-	-	92	0	0.00	72	60	44.78
TSPY26P	0	genome.wustl.edu	37	20	30777004	30777004	+	RNA	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	20	30777004	30777004	C	A	SNP	TSPY26P	ENST00000565928	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.978	-	-	-	no_errors	TSPY26P	HGNC	ENSG00000235217	tier1	-	-	37	0	0.00	17	13	43.33
TTN	0	genome.wustl.edu	37	2	179592555	179592555	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	179592555	179592555	G	T	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.16018	p.Q5340K	0.998	pfam_Ig_I-set,superfamily_RNaseH-like_dom,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	51	0	0.00	90	5	5.26
UBTF	0	genome.wustl.edu	37	17	42286868	42286868	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	17	42286868	42286868	C	T	SNP	UBTF	ENST00000302904	human	ensembl	74_37	-1	known	missense	c.1757	p.G586E	1.000	superfamily_HMG_box_dom,superfamily_ARM-type_fold,smart_HMG_box_dom,pfscan_HMG_box_dom	pfam_HMG_box_dom,superfamily_HMG_box_dom,superfamily_ARM-type_fold,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	UBTF	HGNC	ENSG00000108312				53	0	0.00	73	4	5.19
UGT1A5	0	genome.wustl.edu	37	2	234622316	234622316	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	234622316	234622316	G	T	SNP	UGT1A5	ENST00000373414	human	ensembl	74_37	+1	known	missense	c.679	p.V227F	0.000	pfam_UDP_glucos_trans	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT1A5	HGNC	ENSG00000240224	tier1	rs200994534	-	145	0	0.00	85	103	54.79
UGT3A2	0	genome.wustl.edu	37	5	36066849	36066851	+	In_Frame_Del	DEL	GGA	GGA	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	GGA	GGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	36066849	36066851	GGA	-	DEL	UGT3A2	ENST00000282507	human	ensembl	74_37	-1	known	in_frame_del	c.43_41	p.L14in_frame_del	0.000:0.001:0.003	NULL	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT3A2	HGNC	ENSG00000168671	tier1			86	0	0.00	60	18	23.08
UGT3A2	0	genome.wustl.edu	37	5	36066855	36066855	+	Frame_Shift_Del	DEL	G	G	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	36066855	36066855	G	-	DEL	UGT3A2	ENST00000282507	human	ensembl	74_37	-1	known	frame_shift_del	c.37	p.L13fs	0.000	NULL	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT3A2	HGNC	ENSG00000168671	tier1			86	0	0.00	59	18	23.38
UGT3A2	0	genome.wustl.edu	37	5	36066850	36066850	+	Silent	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	5	36066850	36066850	G	A	SNP	UGT3A2	ENST00000282507	human	ensembl	74_37	-1	known	silent	c.42	p.L14	0.001	NULL	pfam_UDP_glucos_trans,pfam_Glyco_trans_28_C	-	no_errors	UGT3A2	HGNC	ENSG00000168671				85	0	0.00	56	4	6.67
UHMK1	0	genome.wustl.edu	37	1	162470727	162470727	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	162470727	162470727	G	T	SNP	UHMK1	ENST00000489294	human	ensembl	74_37	+1	known	missense	c.586	p.G196W	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_RRM_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_RRM_dom,pfscan_RRM_dom,pfscan_Prot_kinase_dom	-	no_errors	UHMK1	HGNC	ENSG00000152332	tier1	-	-	68	0	0.00	60	4	6.25
UNC13C	0	genome.wustl.edu	37	15	54307297	54307297	+	Nonsense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	15	54307297	54307297	C	T	SNP	UNC13C	ENST00000260323	human	ensembl	74_37	+1	known	nonsense	c.2197	p.Q733*	0.769	NULL	pfam_Munc13_subgr_dom-2,pfam_Ca-dep_secretion_activator,pfam_C2_dom,pfam_Prot_Kinase_C-like_PE/DAG-bd,superfamily_C2_dom,smart_Prot_Kinase_C-like_PE/DAG-bd,smart_C2_dom,pfscan_C2_dom,pfscan_Prot_Kinase_C-like_PE/DAG-bd,prints_C2_dom	-	no_errors	UNC13C	HGNC	ENSG00000137766	tier1	-	-	15	0	0.00	16	10	38.46
UNC80	0	genome.wustl.edu	37	2	210805968	210805968	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	210805968	210805968	G	A	SNP	UNC80	ENST00000439458	human	ensembl	74_37	+1	known	missense	c.6472	p.D2158N	1.000	NULL	NULL	-	no_errors	UNC80	HGNC	ENSG00000144406	tier1	-	-	78	0	0.00	47	65	58.04
UNKL	0	genome.wustl.edu	37	16	1444165	1444165	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	16	1444165	1444165	G	A	SNP	UNKL	ENST00000397462	human	ensembl	74_37	-1	known	missense	c.1465	p.R489C	0.733	pfam_Znf_CCCH,smart_Znf_CCCH	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	UNKL	HGNC	ENSG00000059145	tier1	-	-	98	0	0.00	62	75	54.74
USP13	0	genome.wustl.edu	37	3	179426666	179426666	+	Silent	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	3	179426666	179426666	C	T	SNP	USP13	ENST00000263966	human	ensembl	74_37	+1	known	silent	c.726	p.N242	0.207	pfam_Znf_UBP,smart_Znf_UBP,pirsf_Ubiquitinyl_hydrolase,pfscan_Znf_UBP	pfam_Peptidase_C19/C67,pfam_UBA/Ts_N,pfam_Znf_UBP,superfamily_UBA-like,smart_Znf_UBP,smart_UBA/transl_elong_EF1B_N_euk,pirsf_Ubiquitinyl_hydrolase,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP13	HGNC	ENSG00000058056	tier1	-	-	70	0	0.00	54	4	6.90
VANGL2	0	genome.wustl.edu	37	1	160388867	160388867	+	Missense_Mutation	SNP	C	C	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	1	160388867	160388867	C	T	SNP	VANGL2	ENST00000368061	human	ensembl	74_37	+1	known	missense	c.268	p.R90C	0.996	pfam_Strabismus,pirsf_Strabismus	pfam_Strabismus,pirsf_Strabismus	-	no_errors	VANGL2	HGNC	ENSG00000162738	tier1	rs149889263	-	20	0	0.00	14	11	44.00
VPS37C	0	genome.wustl.edu	37	11	60899905	60899905	+	Frame_Shift_Del	DEL	T	T	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	60899905	60899905	T	-	DEL	VPS37C	ENST00000301765	human	ensembl	74_37	-1	known	frame_shift_del	c.455	p.K152fs	1.000	pfam_Mod_r	pfam_Mod_r	-	no_errors	VPS37C	HGNC	ENSG00000167987	tier1			40	0	0.00	38	2	5.00
VWCE	0	genome.wustl.edu	37	11	61044094	61044094	+	Frame_Shift_Del	DEL	G	G	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	11	61044094	61044094	G	-	DEL	VWCE	ENST00000335613	human	ensembl	74_37	-1	known	frame_shift_del	c.1466	p.P489fs	0.008	smart_VWC_out,smart_VWF_C	pfam_VWF_C,pfam_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_VWF_C,smart_VWC_out,pfscan_EG-like_dom,pfscan_VWF_C	-	no_errors	VWCE	HGNC	ENSG00000167992	tier1			126	0	0.00	84	33	28.21
ZC3H3	0	genome.wustl.edu	37	8	144620514	144620514	+	Silent	SNP	A	A	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	8	144620514	144620514	A	G	SNP	ZC3H3	ENST00000262577	human	ensembl	74_37	-1	known	silent	c.1023	p.S341	0.000	NULL	pfam_Znf_CCCH,smart_Znf_CCCH	-	no_errors	ZC3H3	HGNC	ENSG00000014164	tier1	-	-	51	0	0.00	80	31	27.93
ZFAND2B	0	genome.wustl.edu	37	2	220071745	220071745	+	Silent	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	2	220071745	220071745	G	A	SNP	ZFAND2B	ENST00000289528	human	ensembl	74_37	+1	known	silent	c.36	p.E12	1.000	pfam_Znf_AN1,smart_Znf_AN1	pfam_Znf_AN1,smart_Znf_AN1,smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif,pfscan_Znf_AN1	-	no_errors	ZFAND2B	HGNC	ENSG00000158552	tier1	-	-	116	0	0.00	73	55	42.97
ZNF12	0	genome.wustl.edu	37	7	6731402	6731404	+	In_Frame_Del	DEL	AGA	AGA	-			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	AGA	AGA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	7	6731402	6731404	AGA	-	DEL	ZNF12	ENST00000405858	human	ensembl	74_37	-1	known	in_frame_del	c.1171_1169	p.F390in_frame_del	0.729:0.801:0.993	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF12	HGNC	ENSG00000164631	tier1			49	0	0.00	69	13	15.85
ZNF493	0	genome.wustl.edu	37	19	21606101	21606101	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	21606101	21606101	G	A	SNP	ZNF493	ENST00000355504	human	ensembl	74_37	+1	known	missense	c.256	p.E86K	0.844	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF493	HGNC	ENSG00000196268	tier1	-	-	54	0	0.00	64	26	28.89
ZNF521	0	genome.wustl.edu	37	18	22805487	22805487	+	Missense_Mutation	SNP	G	G	T			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	18	22805487	22805487	G	T	SNP	ZNF521	ENST00000361524	human	ensembl	74_37	-1	known	missense	c.2395	p.Q799K	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF521	HGNC	ENSG00000198795	tier1	-	-	41	0	0.00	41	5	10.87
ZNF562	0	genome.wustl.edu	37	19	9764000	9764000	+	Silent	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	9764000	9764000	G	A	SNP	ZNF562	ENST00000448622	human	ensembl	74_37	-1	known	silent	c.906	p.S302	0.002	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF562	HGNC	ENSG00000171466	tier1	-	-	136	0	0.00	146	64	30.48
ZNF682	0	genome.wustl.edu	37	19	20117176	20117176	+	Nonsense_Mutation	SNP	T	T	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	20117176	20117176	T	A	SNP	ZNF682	ENST00000397165	human	ensembl	74_37	-1	known	nonsense	c.1135	p.K379*	0.060	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF682	HGNC	ENSG00000197124	tier1	-	-	49	0	0.00	39	47	54.65
ZNF682	0	genome.wustl.edu	37	19	20117944	20117944	+	Missense_Mutation	SNP	A	A	G			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	20117944	20117944	A	G	SNP	ZNF682	ENST00000397165	human	ensembl	74_37	-1	known	missense	c.367	p.C123R	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF682	HGNC	ENSG00000197124	tier1	-	-	15	0	0.00	11	11	50.00
ZNFX1	0	genome.wustl.edu	37	20	47865500	47865500	+	Missense_Mutation	SNP	C	C	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	20	47865500	47865500	C	A	SNP	ZNFX1	ENST00000371752	human	ensembl	74_37	-1	known	missense	c.4061	p.R1354L	0.001	NULL	superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_Znf_NFX1	-	no_errors	ZNFX1	HGNC	ENSG00000124201	tier1	-	-	68	0	0.00	59	4	6.35
ZSCAN18	0	genome.wustl.edu	37	19	58596563	58596563	+	Missense_Mutation	SNP	G	G	A			TCGA-V5-AASV-01A-11D-A387-09	TCGA-V5-AASV-10A-01D-A38A-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	b0afac72-fa23-47e8-a05d-db61735de14b	24963b8e-e095-4d3b-8c6c-bce94ccc8957	19	58596563	58596563	G	A	SNP	ZSCAN18	ENST00000600404	human	ensembl	74_37	-1	known	missense	c.1190	p.A397V	0.000	NULL	pfam_Tscrpt_reg_SCAN,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZSCAN18	HGNC	ENSG00000121413	tier1	-	-	16	0	0.00	15	10	40.00
