Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA1	0	genome.wustl.edu	37	9	107651454	107651454	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	9	107651454	107651454	G	A	SNP	ABCA1	ENST00000374736	human	ensembl	74_37	-1	known	missense	c.89	p.A30V	1.000	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA1	HGNC	ENSG00000165029				45	0	0.00	46	4	8.00
ABTB2	0	genome.wustl.edu	37	11	34186322	34186322	+	Silent	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	11	34186322	34186322	G	A	SNP	ABTB2	ENST00000435224	human	ensembl	74_37	-1	known	silent	c.1899	p.P633	0.896	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt	pfam_BTB_POZ,pfam_Ankyrin_rpt,superfamily_Histone-fold,superfamily_BTB/POZ_fold,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_BTB/POZ-like,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like	-	no_errors	ABTB2	HGNC	ENSG00000166016	tier1	-	-	38	0	0.00	22	40	64.52
ACSM5	0	genome.wustl.edu	37	16	20439186	20439186	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	16	20439186	20439186	C	A	SNP	ACSM5	ENST00000331849	human	ensembl	74_37	+1	known	missense	c.998	p.T333N	0.999	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSM5	HGNC	ENSG00000183549	tier1	-	-	29	0	0.00	26	8	23.53
ACTN4	0	genome.wustl.edu	37	19	39218932	39218932	+	RNA	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	19	39218932	39218932	G	T	SNP	ACTN4	ENST00000477174	human	ensembl	74_37	+1	putative	rna	NULL	NULL	1.000	-	-	-	no_errors	ACTN4	HGNC	ENSG00000130402	tier1	-	-	30	0	0.00	32	4	11.11
ADAM30	0	genome.wustl.edu	37	1	120438761	120438761	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	1	120438761	120438761	G	A	SNP	ADAM30	ENST00000369400	human	ensembl	74_37	-1	known	nonsense	c.199	p.Q67*	0.058	pfam_Peptidase_M12B_N	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	-	no_errors	ADAM30	HGNC	ENSG00000134249				20	0	0.00	25	4	13.79
ALPI	0	genome.wustl.edu	37	2	233322349	233322349	+	Silent	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	233322349	233322349	C	T	SNP	ALPI	ENST00000295463	human	ensembl	74_37	+1	known	silent	c.723	p.S241	0.000	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase,prints_Alkaline_phosphatase	-	no_errors	ALPI	HGNC	ENSG00000163295				110	0	0.00	49	3	5.77
ALPP	0	genome.wustl.edu	37	2	233244328	233244328	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	233244328	233244328	C	A	SNP	ALPP	ENST00000392027	human	ensembl	74_37	+1	known	missense	c.415	p.R139S	0.973	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase	pfam_Alkaline_phosphatase,superfamily_Alkaline_phosphatase_core,smart_Alkaline_phosphatase,prints_Alkaline_phosphatase	-	no_errors	ALPP	HGNC	ENSG00000163283				52	0	0.00	38	2	5.00
AMH	0	genome.wustl.edu	37	19	2250424	2250424	+	Silent	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	19	2250424	2250424	C	T	SNP	AMH	ENST00000221496	human	ensembl	74_37	+1	known	silent	c.501	p.Y167	0.988	pfam_AMH_N,pirsf_Muellerian-inhibiting_factor	pfam_AMH_N,pfam_TGF-b_C,smart_TGF-b_C,pirsf_Muellerian-inhibiting_factor	-	no_errors	AMH	HGNC	ENSG00000104899	tier1	-	-	44	0	0.00	35	17	32.69
AMIGO3	0	genome.wustl.edu	37	3	49755552	49755552	+	Silent	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	49755552	49755552	G	A	SNP	AMIGO3	ENST00000320431	human	ensembl	74_37	-1	known	silent	c.1347	p.S449	0.913	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	AMIGO3	HGNC	ENSG00000176020	tier1	-	-	55	0	0.00	22	3	12.00
APEX2	0	genome.wustl.edu	37	X	55030234	55030234	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	X	55030234	55030234	A	T	SNP	APEX2	ENST00000374987	human	ensembl	74_37	+1	known	missense	c.572	p.H191L	1.000	pfam_Endo/exonuclease/phosphatase,superfamily_Endo/exonuclease/phosphatase,tigrfam_AP_endonuc_1	pfam_Endo/exonuclease/phosphatase,pfam_Znf_GRF,superfamily_Endo/exonuclease/phosphatase,tigrfam_AP_endonuc_1	-	no_errors	APEX2	HGNC	ENSG00000169188	tier1	-	-	25	0	0.00	5	15	75.00
APOBEC3F	0	genome.wustl.edu	37	22	39448625	39448625	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	22	39448625	39448625	G	T	SNP	APOBEC3F	ENST00000308521	human	ensembl	74_37	+1	known	missense	c.1047	p.E349D	0.000	pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	pfam_APOBEC_N,pfam_APOBEC_C,superfamily_Cytidine_deaminase-like	-	no_errors	APOBEC3F	HGNC	ENSG00000128394	tier1	-	-	47	0	0.00	51	4	7.27
APPBP2	0	genome.wustl.edu	37	17	58524943	58524943	+	Nonstop_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	17	58524943	58524943	C	A	SNP	APPBP2	ENST00000083182	human	ensembl	74_37	-1	known	nonstop	c.1757	p.*586L	1.000	NULL	smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	APPBP2	HGNC	ENSG00000062725	tier1	-	-	79	0	0.00	79	8	9.20
ARL6IP6	0	genome.wustl.edu	37	2	153616651	153616651	+	RNA	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	153616651	153616651	C	A	SNP	ARL6IP6	ENST00000495469	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	ARL6IP6	HGNC	ENSG00000177917	tier1	-	-	73	0	0.00	31	15	32.61
ARPC4	0	genome.wustl.edu	37	3	9845219	9845219	+	Splice_Site	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	9845219	9845219	G	A	SNP	ARPC4	ENST00000440787	human	ensembl	74_37	+1	known	splice_site	c.331-1	e5-1	0.000	-	-	-	no_errors	ARPC4	HGNC	ENSG00000241553	tier1	-	-	51	0	0.00	124	23	15.65
ASH1L	0	genome.wustl.edu	37	1	155319190	155319190	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	1	155319190	155319190	C	A	SNP	ASH1L	ENST00000368346	human	ensembl	74_37	-1	known	missense	c.7497	p.Q2499H	1.000	pfam_Bromodomain,superfamily_Bromodomain,smart_Bromodomain,pfscan_Bromodomain	pfam_SET_dom,pfam_BAH_dom,pfam_Bromodomain,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_AT_hook_DNA-bd_motif,smart_AWS,smart_SET_dom,smart_Bromodomain,smart_Znf_PHD,smart_BAH_dom,pfscan_AWS,pfscan_BAH_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Bromodomain	-	no_errors	ASH1L	HGNC	ENSG00000116539	tier1	-	-	59	0	0.00	18	33	64.71
ASPN	0	genome.wustl.edu	37	9	95237021	95237021	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	9	95237021	95237021	G	C	SNP	ASPN	ENST00000375544	human	ensembl	74_37	-1	known	missense	c.159	p.D53E	0.936	pirsf_SLRP_I_decor/aspor/byglycan	pfam_Leu-rich_rpt,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,pirsf_SLRP_I_decor/aspor/byglycan	-	no_errors	ASPN	HGNC	ENSG00000106819				44	0	0.00	37	6	13.95
ATP2B2	0	genome.wustl.edu	37	3	10377897	10377897	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	10377897	10377897	C	T	SNP	ATP2B2	ENST00000460129	human	ensembl	74_37	-1	known	missense	c.3373	p.V1125I	1.000	pfam_ATP_Ca_trans_C	pfam_ATPase_P-typ_transduc_dom_A,pfam_ATPase_P-typ_cation-transptr_C,pfam_HAD-like_dom,pfam_ATP_Ca_trans_C,pfam_ATPase_P-typ_cation-transptr_N,superfamily_ATPase_P-typ_cyto_domN,superfamily_HAD-like_dom,smart_ATPase_P-typ_cation-transptr_N,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Ca-transp_plasma,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP2B2	HGNC	ENSG00000157087	tier1	-	-	96	0	0.00	159	82	34.02
ATP8A1	0	genome.wustl.edu	37	4	42457409	42457409	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	4	42457409	42457409	G	T	SNP	ATP8A1	ENST00000381668	human	ensembl	74_37	-1	known	missense	c.2722	p.L908I	1.000	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP8A1	HGNC	ENSG00000124406				35	0	0.00	25	2	7.41
B3GNT1	0	genome.wustl.edu	37	11	66114717	66114717	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	11	66114717	66114717	G	T	SNP	B3GNT1	ENST00000311181	human	ensembl	74_37	-1	known	missense	c.300	p.H100Q	1.000	NULL	NULL	-	no_errors	B3GNT1	HGNC	ENSG00000174684				71	0	0.00	38	4	9.52
B4GALT7	0	genome.wustl.edu	37	5	177035912	177035912	+	Frame_Shift_Del	DEL	T	T	-			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	5	177035912	177035912	T	-	DEL	B4GALT7	ENST00000029410	human	ensembl	74_37	+1	known	frame_shift_del	c.725	p.F243fs	1.000	pfam_Galactosyl_T_C	pfam_Galactosyl_T_C,prints_Galactosyl_T	-	no_errors	B4GALT7	HGNC	ENSG00000027847	tier1			35	0	0.00	29	3	9.38
BAHD1	0	genome.wustl.edu	37	15	40750706	40750706	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	15	40750706	40750706	G	T	SNP	BAHD1	ENST00000416165	human	ensembl	74_37	+1	known	missense	c.43	p.G15C	0.710	NULL	pfam_BAH_dom,smart_BAH_dom,pfscan_BAH_dom	-	no_errors	BAHD1	HGNC	ENSG00000140320	tier1	-	-	66	0	0.00	42	4	8.70
BCKDHB	0	genome.wustl.edu	37	6	80877472	80877472	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	80877472	80877472	G	T	SNP	BCKDHB	ENST00000320393	human	ensembl	74_37	+1	known	missense	c.421	p.A141S	1.000	pfam_Transketolase-like_Pyr-bd,smart_Transketolase-like_Pyr-bd	pfam_Transketolase-like_Pyr-bd,pfam_Transketolase_C,superfamily_Transketo_C/Pyr-ferredox_oxred,smart_Transketolase-like_Pyr-bd	-	no_errors	BCKDHB	HGNC	ENSG00000083123	tier1	-	-	46	0	0.00	64	4	5.88
BPTF	0	genome.wustl.edu	37	17	65850689	65850689	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	17	65850689	65850689	G	T	SNP	BPTF	ENST00000321892	human	ensembl	74_37	+1	known	missense	c.1247	p.C416F	1.000	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	pfam_Bromodomain,pfam_DDT_dom,pfam_Znf_PHD-finger,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,superfamily_Adenylate_cyclase-assoc_CAP_N,smart_DDT_dom_subgr,smart_Znf_PHD,smart_Bromodomain,pfscan_Znf_PHD-finger,pfscan_DDT_dom_superfamily,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	BPTF	HGNC	ENSG00000171634				37	0	0.00	67	5	6.94
C12orf40	0	genome.wustl.edu	37	12	40077922	40077922	+	Splice_Site	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	12	40077922	40077922	G	T	SNP	C12orf40	ENST00000398716	human	ensembl	74_37	+1	known	splice_site	c.1056-1	e7-1	0.002	-	-	-	no_errors	C12orf40	HGNC	ENSG00000180116	tier1	-	-	44	0	0.00	24	9	27.27
C21orf88	0	genome.wustl.edu	37	21	40969497	40969497	+	RNA	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	21	40969497	40969497	G	T	SNP	C21orf88	ENST00000489821	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.220	-	-	-	no_errors	C21orf88	HGNC	ENSG00000184809	tier1	-	-	20	0	0.00	8	3	27.27
C4orf19	0	genome.wustl.edu	37	4	37591834	37591834	+	Frame_Shift_Del	DEL	A	A	-			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	4	37591834	37591834	A	-	DEL	C4orf19	ENST00000284437	human	ensembl	74_37	+1	known	frame_shift_del	c.157	p.N54fs	0.000	NULL	NULL	-	no_errors	C4orf19	HGNC	ENSG00000154274	tier1			50	0	0.00	20	2	9.09
CACNA1H	0	genome.wustl.edu	37	16	1256131	1256131	+	Silent	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	16	1256131	1256131	C	T	SNP	CACNA1H	ENST00000348261	human	ensembl	74_37	+1	known	silent	c.2631	p.D877	0.975	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_PKD1_2_channel,prints_VDCC_T_a1su,prints_PKD_2	-	no_errors	CACNA1H	HGNC	ENSG00000196557				21	0	0.00	35	3	7.89
CATSPERB	0	genome.wustl.edu	37	14	92074645	92074645	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	14	92074645	92074645	A	T	SNP	CATSPERB	ENST00000256343	human	ensembl	74_37	-1	known	missense	c.2702	p.M901K	0.031	NULL	superfamily_Sialidases	-	no_errors	CATSPERB	HGNC	ENSG00000133962	tier1	-	-	79	0	0.00	18	19	51.35
CCDC162P	0	genome.wustl.edu	37	6	109630693	109630694	+	RNA	INS	-	-	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	109630693	109630694	-	T	INS	CCDC162P	ENST00000506861	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.015:0.086	-	-	-	no_errors	CCDC162P	HGNC	ENSG00000203799	tier1			30	0	0.00	28	3	9.68
CD27	0	genome.wustl.edu	37	12	6559346	6559346	+	Silent	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	12	6559346	6559346	C	A	SNP	CD27	ENST00000266557	human	ensembl	74_37	+1	known	silent	c.276	p.L92	0.029	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg	pfam_TNFR/NGFR_Cys_rich_reg,smart_TNFR/NGFR_Cys_rich_reg,pfscan_TNFR/NGFR_Cys_rich_reg,prints_TNFR_7,prints_Fas_rcpt	-	no_errors	CD27	HGNC	ENSG00000139193				39	0	0.00	25	2	7.41
CDC42EP3	0	genome.wustl.edu	37	2	37873326	37873326	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	37873326	37873326	G	T	SNP	CDC42EP3	ENST00000295324	human	ensembl	74_37	-1	known	missense	c.405	p.F135L	0.146	NULL	pfam_CRIB_dom,smart_CRIB_dom,pfscan_CRIB_dom	-	no_errors	CDC42EP3	HGNC	ENSG00000163171				22	0	0.00	28	2	6.67
CDK10	0	genome.wustl.edu	37	16	89761401	89761401	+	Silent	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	16	89761401	89761401	G	T	SNP	CDK10	ENST00000353379	human	ensembl	74_37	+1	known	silent	c.855	p.L285	0.979	pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDK10	HGNC	ENSG00000185324				98	0	0.00	65	4	5.80
CDKL2	0	genome.wustl.edu	37	4	76522219	76522219	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	4	76522219	76522219	G	T	SNP	CDKL2	ENST00000429927	human	ensembl	74_37	-1	known	missense	c.1222	p.P408T	0.019	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	CDKL2	HGNC	ENSG00000138769				54	0	0.00	57	4	6.56
CELP	0	genome.wustl.edu	37	9	135962555	135962556	+	RNA	INS	-	-	CTGC			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	9	135962555	135962556	-	CTGC	INS	CELP	ENST00000411440	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.038:0.013	-	-	-	no_errors	CELP	HGNC	ENSG00000170827	tier1			13	0	0.00	8	5	38.46
CELSR2	0	genome.wustl.edu	37	1	109814989	109814989	+	Silent	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	1	109814989	109814989	G	T	SNP	CELSR2	ENST00000271332	human	ensembl	74_37	+1	known	silent	c.8016	p.S2672	0.335	NULL	pfam_Cadherin,pfam_DUF3497,pfam_Laminin_G,pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_EG-like_dom,pfam_EGF_laminin,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,smart_EGF_laminin,smart_GPCR_2_extracellular_dom,smart_GPS_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_GPS_dom,pfscan_Laminin_G,pfscan_Cadherin,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,prints_Cadherin,prints_GPCR_2_secretin-like	-	no_errors	CELSR2	HGNC	ENSG00000143126				47	0	0.00	37	2	5.13
CNPY1	0	genome.wustl.edu	37	7	155301672	155301672	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	7	155301672	155301672	C	A	SNP	CNPY1	ENST00000321736	human	ensembl	74_37	-1	putative	missense	c.61	p.A21S	0.995	pfam_DUF3456	pfam_DUF3456	-	no_errors	CNPY1	HGNC	ENSG00000146910				40	0	0.00	34	2	5.56
CUX1	0	genome.wustl.edu	37	7	101844825	101844825	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	7	101844825	101844825	C	T	SNP	CUX1	ENST00000360264	human	ensembl	74_37	+1	known	missense	c.2281	p.P761S	0.466	NULL	pfam_Hmoeo_CUT,pfam_Homeobox_dom,superfamily_Lambda_DNA-bd_dom,superfamily_Homeodomain-like,superfamily_LemA-like_dom,smart_Homeobox_dom,pfscan_Homeobox_dom,pfscan_Hmoeo_CUT	-	no_errors	CUX1	HGNC	ENSG00000257923	tier1	-	-	43	0	0.00	36	4	10.00
CYP27B1	0	genome.wustl.edu	37	12	58158631	58158631	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	12	58158631	58158631	C	A	SNP	CYP27B1	ENST00000228606	human	ensembl	74_37	-1	known	missense	c.869	p.G290V	1.000	pfam_Cyt_P450,superfamily_Cyt_P450	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450_B	-	no_errors	CYP27B1	HGNC	ENSG00000111012				43	0	0.00	26	2	7.14
DCC	0	genome.wustl.edu	37	18	50918162	50918162	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	18	50918162	50918162	G	T	SNP	DCC	ENST00000442544	human	ensembl	74_37	+1	known	missense	c.2593	p.A865S	1.000	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Neogenin_C,pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	DCC	HGNC	ENSG00000187323	tier1	-	-	33	0	0.00	38	4	9.52
DCHS2	0	genome.wustl.edu	37	4	155244405	155244405	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	4	155244405	155244405	G	T	SNP	DCHS2	ENST00000339452	human	ensembl	74_37	-1	known	missense	c.4095	p.N1365K	0.009	NULL	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	DCHS2	HGNC	ENSG00000197410				29	0	0.00	57	4	6.56
DCP1A	0	genome.wustl.edu	37	3	53326271	53326271	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	53326271	53326271	T	C	SNP	DCP1A	ENST00000607628	human	ensembl	74_37	-1	known	missense	c.1211	p.H404R	1.000	NULL	pfam_DCP1	-	no_errors	DCP1A	HGNC	ENSG00000162290	tier1	-	-	47	0	0.00	20	28	58.33
DEF8	0	genome.wustl.edu	37	16	90021666	90021666	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	16	90021666	90021666	C	T	SNP	DEF8	ENST00000268676	human	ensembl	74_37	+1	known	missense	c.397	p.R133C	1.000	NULL	pfam_Prot_Kinase_C-like_PE/DAG-bd,smart_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_Kinase_C-like_PE/DAG-bd	-	no_errors	DEF8	HGNC	ENSG00000140995	tier1	-	-	60	0	0.00	26	17	39.53
DESI2	0	genome.wustl.edu	37	1	244816601	244816601	+	RNA	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	1	244816601	244816601	G	T	SNP	DESI2	ENST00000484738	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DESI2	HGNC	ENSG00000121644	tier1	-	-	13	0	0.00	7	5	41.67
DICER1	0	genome.wustl.edu	37	14	95570306	95570306	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	14	95570306	95570306	G	T	SNP	DICER1	ENST00000343455	human	ensembl	74_37	-1	known	missense	c.3427	p.L1143I	0.976	NULL	pfam_RNase_III_dom,pfam_PAZ_dom,pfam_Dicer_dimerisation_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_Helicase/UvrB_dom,superfamily_RNase_III_dom,superfamily_P-loop_NTPase,superfamily_PAZ_dom,smart_Helicase_ATP-bd,smart_Helicase_C,smart_PAZ_dom,smart_RNase_III_dom,smart_dsRNA-bd_dom,pfscan_PAZ_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_dsRNA-bd_dom,pfscan_RNase_III_dom	-	no_errors	DICER1	HGNC	ENSG00000100697				44	0	0.00	32	4	11.11
DOCK11	0	genome.wustl.edu	37	X	117819759	117819759	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	X	117819759	117819759	G	A	SNP	DOCK11	ENST00000276202	human	ensembl	74_37	+1	known	missense	c.6211	p.A2071T	0.000	NULL	pfam_DOCK_C,pfam_DOCK_C/D_N,pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	DOCK11	HGNC	ENSG00000147251	tier1	-	-	35	0	0.00	8	21	72.41
DPP10	0	genome.wustl.edu	37	2	116548752	116548752	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	116548752	116548752	T	A	SNP	DPP10	ENST00000393147	human	ensembl	74_37	+1	known	missense	c.1639	p.Y547N	1.000	NULL	pfam_Peptidase_S9B,pfam_Peptidase_S9	-	no_errors	DPP10	HGNC	ENSG00000175497	tier1	-	-	21	0	0.00	23	6	20.69
ECI2	0	genome.wustl.edu	37	6	4117631	4117631	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	4117631	4117631	G	T	SNP	ECI2	ENST00000380118	human	ensembl	74_37	-1	known	missense	c.940	p.Q314K	0.998	pfam_Crotonase_core_superfam	pfam_Acyl-CoA-binding_protein,pfam_Crotonase_core_superfam,superfamily_Acyl-CoA-binding_protein,prints_Acyl-CoA-binding_protein	-	no_errors	ECI2	HGNC	ENSG00000198721	tier1	-	-	74	0	0.00	40	4	9.09
ECM2	0	genome.wustl.edu	37	9	95277146	95277148	+	In_Frame_Del	DEL	TCC	TCC	-			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	TCC	TCC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	9	95277146	95277148	TCC	0	DEL	ECM2	ENST00000344604	human	ensembl	74_37	-1	known	in_frame_del	c.821_819	p.E273in_frame_del	0.117:0.088:0.005	NULL	pfam_Leu-rich_rpt,pfam_VWF_C,smart_VWF_C,smart_Leu-rich_rpt_typical-subtyp,pfscan_VWF_C	-	no_errors	ECM2	HGNC	ENSG00000106823				34	0	0.00	98	6	5.77
ENPP4	0	genome.wustl.edu	37	6	46107802	46107802	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	46107802	46107802	A	G	SNP	ENPP4	ENST00000321037	human	ensembl	74_37	+1	known	missense	c.482	p.E161G	0.030	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	pfam_Phosphodiest/P_Trfase,pfam_Sulfatase,superfamily_Alkaline_phosphatase_core	-	no_errors	ENPP4	HGNC	ENSG00000001561	tier1	-	-	25	0	0.00	22	5	18.52
ENPP6	0	genome.wustl.edu	37	4	185012359	185012359	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	4	185012359	185012359	C	T	SNP	ENPP6	ENST00000296741	human	ensembl	74_37	-1	known	missense	c.1294	p.A432T	0.462	NULL	pfam_Phosphodiest/P_Trfase,superfamily_Alkaline_phosphatase_core	-	no_errors	ENPP6	HGNC	ENSG00000164303				26	0	0.00	33	3	8.33
ENSG00000188850	0	genome.wustl.edu	37	5	43348816	43348817	+	RNA	INS	-	-	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	5	43348816	43348817	-	A	INS	ENSG00000188850	ENST00000511991	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	RP11-159F24.2	Clone_based_vega_gene	ENSG00000188850	tier1			10	0	0.00	5	5	50.00
ENSG00000206603	0	genome.wustl.edu	37	7	56123143	56123143	+	RNA	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	7	56123143	56123143	G	T	SNP	ENSG00000206603	ENST00000383876	human	ensembl	74_37	+1	novel	rna	NULL	NULL	1.000	-	-	-	no_errors	SNORA22	RFAM	ENSG00000206603	tier1	-	-	50	0	0.00	71	4	5.33
ENSG00000243305	0	genome.wustl.edu	37	3	152175739	152175740	+	RNA	DEL	AT	AT	-			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	AT	AT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	152175739	152175740	AT	-	DEL	ENSG00000243305	ENST00000463255	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999:0.999	-	-	-	no_errors	RP11-362A9.3	Clone_based_vega_gene	ENSG00000243305	tier1			13	0	0.00	13	17	56.67
ENSG00000264629	0	genome.wustl.edu	37	22	23077083	23077083	+	RNA	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	22	23077083	23077083	G	A	SNP	ENSG00000264629	ENST00000579613	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.112	-	-	-	no_errors	D87007.1	Clone_based_ensembl_gene	ENSG00000264629	tier1	-	-	67	0	0.00	66	36	35.29
ENSG00000266535	0	genome.wustl.edu	37	17	31439098	31439099	+	RNA	DEL	AG	AG	-			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	AG	AG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	17	31439098	31439099	AG	-	DEL	ENSG00000266535	ENST00000584688	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.563:0.970	-	-	-	no_errors	RP11-40A13.1	Clone_based_vega_gene	ENSG00000266535	tier1			23	0	0.00	24	4	14.29
ERBB2IP	0	genome.wustl.edu	37	5	65349797	65349797	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	5	65349797	65349797	A	G	SNP	ERBB2IP	ENST00000284037	human	ensembl	74_37	+1	known	missense	c.2651	p.Y884C	1.000	NULL	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	-	no_errors	ERBB2IP	HGNC	ENSG00000112851	tier1	-	-	45	0	0.00	27	16	37.21
ESPL1	0	genome.wustl.edu	37	12	53663130	53663130	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	12	53663130	53663130	C	A	SNP	ESPL1	ENST00000257934	human	ensembl	74_37	+1	known	missense	c.404	p.A135D	0.878	NULL	pfam_Peptidase_C50,superfamily_DsrEFH-like	-	no_errors	ESPL1	HGNC	ENSG00000135476	tier1	-	-	13	0	0.00	9	6	40.00
FAM157B	0	genome.wustl.edu	37	9	141107532	141107533	+	RNA	INS	-	-	GGG			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	9	141107532	141107533	-	GGG	INS	FAM157B	ENST00000446912	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.051:0.039	-	-	-	no_errors	FAM157B	HGNC	ENSG00000233013	tier1			72	0	0.00	112	12	9.68
FAM171A1	0	genome.wustl.edu	37	10	15254987	15254989	+	In_Frame_Del	DEL	TCA	TCA	-			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	TCA	TCA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	10	15254987	15254989	TCA	-	DEL	FAM171A1	ENST00000378116	human	ensembl	74_37	-1	known	in_frame_del	c.2600_2598	p.D867in_frame_del	1.000:0.998:0.826	pfam_Uncharacterised_FAM171	pfam_Uncharacterised_FAM171	-	no_errors	FAM171A1	HGNC	ENSG00000148468	tier1			31	0	0.00	38	3	7.32
FAM86DP	0	genome.wustl.edu	37	3	75471400	75471400	+	RNA	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	75471400	75471400	C	T	SNP	FAM86DP	ENST00000459803	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	FAM86DP	HGNC	ENSG00000244026				140	0	0.00	70	5	6.67
FAT4	0	genome.wustl.edu	37	4	126370789	126370789	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	4	126370789	126370789	G	T	SNP	FAT4	ENST00000394329	human	ensembl	74_37	+1	known	missense	c.8618	p.S2873I	1.000	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,superfamily_Cadherin-like,superfamily_ConA-like_lec_gl_sf,smart_Cadherin,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT4	HGNC	ENSG00000196159				33	0	0.00	38	2	5.00
FIGF	0	genome.wustl.edu	37	X	15364158	15364159	+	RNA	INS	-	-	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	X	15364158	15364159	-	T	INS	FIGF	ENST00000488351	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	FIGF	HGNC	ENSG00000165197	tier1			23	0	0.00	28	3	9.68
FKBP5	0	genome.wustl.edu	37	6	35547893	35547893	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	35547893	35547893	G	T	SNP	FKBP5	ENST00000357266	human	ensembl	74_37	-1	known	missense	c.946	p.L316I	1.000	NULL	pfam_PPIase_FKBP_dom,pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_PPIase_FKBP_dom	-	no_errors	FKBP5	HGNC	ENSG00000096060	tier1	-	-	64	0	0.00	70	4	5.41
FLJ36000	0	genome.wustl.edu	37	17	21911549	21911549	+	RNA	SNP	G	G	C			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	17	21911549	21911549	G	C	SNP	FLJ36000	ENST00000581223	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	RP11-744K17.9	Clone_based_vega_gene	ENSG00000266795	tier1	-	-	32	0	0.00	18	5	21.74
FMN2	0	genome.wustl.edu	37	1	240494009	240494009	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	1	240494009	240494009	G	T	SNP	FMN2	ENST00000319653	human	ensembl	74_37	+1	known	missense	c.4544	p.G1515V	0.999	pfam_FH2_Formin,smart_FH2_Formin	pfam_FH2_Formin,pfam_Formin_homology_1,smart_FH2_Formin,pfscan_DEP_dom	-	no_errors	FMN2	HGNC	ENSG00000155816				99	0	0.00	75	4	5.06
FSTL5	0	genome.wustl.edu	37	4	162697208	162697208	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	4	162697208	162697208	G	T	SNP	FSTL5	ENST00000306100	human	ensembl	74_37	-1	known	missense	c.428	p.T143N	0.910	NULL	pfam_Ig_I-set,pfam_Kazal_dom,pfam_Ig_V-set,smart_Kazal_dom,smart_Ig_sub,smart_Ig_sub2,pfscan_EF_hand_dom,pfscan_Ig-like_dom	-	no_errors	FSTL5	HGNC	ENSG00000168843	tier1	-	-	14	0	0.00	16	12	42.86
FUT6	0	genome.wustl.edu	37	19	5831513	5831513	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	19	5831513	5831513	C	T	SNP	FUT6	ENST00000286955	human	ensembl	74_37	-1	known	missense	c.1066	p.A356T	0.000	pfam_Glyco_trans_10	pfam_Glyco_trans_10	-	no_errors	FUT6	HGNC	ENSG00000156413				121	0	0.00	75	4	5.06
GOLGB1	0	genome.wustl.edu	37	3	121383785	121383785	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	121383785	121383785	G	T	SNP	GOLGB1	ENST00000340645	human	ensembl	74_37	-1	known	missense	c.9633	p.N3211K	0.056	NULL	superfamily_Prefoldin,superfamily_STAT_TF_coiled-coil,smart_Leu_zip_homeo	-	no_errors	GOLGB1	HGNC	ENSG00000173230	tier1	-	-	48	0	0.00	97	20	16.95
GPLD1	0	genome.wustl.edu	37	6	24448365	24448365	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	24448365	24448365	G	T	SNP	GPLD1	ENST00000230036	human	ensembl	74_37	-1	known	nonsense	c.1518	p.C506*	1.000	NULL	pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Gprt_PLipase_D	-	no_errors	GPLD1	HGNC	ENSG00000112293				69	0	0.00	28	2	6.67
GPR21	0	genome.wustl.edu	37	9	125797216	125797216	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	9	125797216	125797216	G	T	SNP	GPR21	ENST00000373642	human	ensembl	74_37	+1	known	missense	c.371	p.S124I	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR21	HGNC	ENSG00000188394				25	0	0.00	58	4	6.45
GPR83	0	genome.wustl.edu	37	11	94134267	94134267	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	11	94134267	94134267	G	T	SNP	GPR83	ENST00000243673	human	ensembl	74_37	-1	known	missense	c.147	p.F49L	0.967	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn,prints_NPY_rcpt	-	no_errors	GPR83	HGNC	ENSG00000123901	tier1	-	-	45	0	0.00	36	4	10.00
GRAP	0	genome.wustl.edu	37	17	18925357	18925357	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	17	18925357	18925357	C	T	SNP	GRAP	ENST00000284154	human	ensembl	74_37	-1	known	missense	c.569	p.R190H	0.701	pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_SH3_domain,pfscan_SH3_domain,prints_p67phox	pfam_SH3_domain,pfam_SH3_2,pfam_SH2,superfamily_SH3_domain,smart_SH3_domain,smart_SH2,pfscan_SH2,pfscan_SH3_domain,prints_SH2,prints_SH3_domain,prints_p67phox	-	no_errors	GRAP	HGNC	ENSG00000154016	tier1	-	-	93	0	0.00	24	21	46.67
GSPT1	0	genome.wustl.edu	37	16	11969646	11969646	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	16	11969646	11969646	C	A	SNP	GSPT1	ENST00000434724	human	ensembl	74_37	-1	known	missense	c.1833	p.Q611H	1.000	pfam_Transl_elong_EFTu/EF1A_C,superfamily_Transl_elong_EF1A/Init_IF2_C	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFTu/EF1A_C,pfam_Transl_elong_EFTu/EF1A_2,pfam_Ataxin-2_C,superfamily_P-loop_NTPase,superfamily_Transl_elong_EF1A/Init_IF2_C,superfamily_Transl_B-barrel,prints_EF_GTP-bd_dom	-	no_errors	GSPT1	HGNC	ENSG00000103342	tier1	-	-	84	0	0.00	51	4	7.27
GUCA1B	0	genome.wustl.edu	37	6	42153445	42153445	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	42153445	42153445	A	G	SNP	GUCA1B	ENST00000230361	human	ensembl	74_37	-1	known	missense	c.448	p.F150L	1.000	smart_EF_hand_dom,pfscan_EF_hand_dom	smart_EF_hand_dom,pfscan_EF_hand_dom,prints_Recoverin	-	no_errors	GUCA1B	HGNC	ENSG00000112599	tier1	-	-	35	0	0.00	24	4	14.29
HID1	0	genome.wustl.edu	37	17	72956020	72956020	+	Nonsense_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	17	72956020	72956020	C	A	SNP	HID1	ENST00000425042	human	ensembl	74_37	-1	known	nonsense	c.964	p.E322*	0.995	NULL	pfam_Dymeclin	-	no_errors	HID1	HGNC	ENSG00000167861				36	0	0.00	31	4	11.43
HPR	0	genome.wustl.edu	37	16	72107693	72107694	+	Frame_Shift_Del	DEL	GT	GT	-			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	GT	GT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	16	72107693	72107694	GT	-	DEL	HPR	ENST00000228226	human	ensembl	74_37	+1	known	frame_shift_del	c.19_20	p.C10fs	0.010:0.011	NULL	pirsf_Haptoglobin,pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Sushi_SCR_CCP,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	HPR	HGNC	ENSG00000261701	tier1			20	0	0.00	28	3	9.68
IBTK	0	genome.wustl.edu	37	6	82950160	82950160	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	82950160	82950160	A	G	SNP	IBTK	ENST00000306270	human	ensembl	74_37	-1	known	missense	c.44	p.L15P	0.949	NULL	pfam_Reg_chr_condens,pfam_BTB_POZ,pfam_Ankyrin_rpt,superfamily_RCC1/BLIP-II,superfamily_BTB/POZ_fold,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_BTB/POZ-like,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_BTB/POZ-like,pfscan_Reg_chr_condens	-	no_errors	IBTK	HGNC	ENSG00000005700				46	0	0.00	30	2	6.25
IL1R2	0	genome.wustl.edu	37	2	102632364	102632364	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	102632364	102632364	G	T	SNP	IL1R2	ENST00000332549	human	ensembl	74_37	+1	known	nonsense	c.364	p.E122*	0.724	smart_Ig_sub,pfscan_Ig-like_dom,prints_IL-1_rcpt_II-typ	pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom,prints_IL-1_rcpt_II-typ,prints_IL-1_rcpt_I/II-typ	-	no_errors	IL1R2	HGNC	ENSG00000115590	tier1	-	-	49	0	0.00	60	4	6.25
IMPG1	0	genome.wustl.edu	37	6	76660728	76660728	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	76660728	76660728	G	T	SNP	IMPG1	ENST00000369950	human	ensembl	74_37	-1	known	missense	c.1375	p.L459M	0.007	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_EG-like_dom,pfscan_SEA_dom	-	no_errors	IMPG1	HGNC	ENSG00000112706	tier1	-	-	53	0	0.00	61	4	6.15
INPP1	0	genome.wustl.edu	37	2	191235631	191235631	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	191235631	191235631	C	A	SNP	INPP1	ENST00000322522	human	ensembl	74_37	+1	known	missense	c.703	p.L235I	0.022	pfam_Inositol_monophosphatase	pfam_Inositol_monophosphatase	-	no_errors	INPP1	HGNC	ENSG00000151689	tier1	-	-	63	0	0.00	44	4	8.33
IQGAP1	0	genome.wustl.edu	37	15	90931587	90931587	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	15	90931587	90931587	A	G	SNP	IQGAP1	ENST00000268182	human	ensembl	74_37	+1	known	missense	c.14	p.D5G	0.997	NULL	pfam_RasGAP,pfam_RasGAP_C,pfam_IQ_motif_EF-hand-BS,pfam_CH-domain,pfam_WW_dom,superfamily_Rho_GTPase_activation_prot,superfamily_CH-domain,superfamily_P-loop_NTPase,smart_CH-domain,smart_WW_dom,smart_IQ_motif_EF-hand-BS,smart_RasGAP,pfscan_CH-domain,pfscan_IQ_motif_EF-hand-BS,pfscan_WW_dom,pfscan_RasGAP	-	no_errors	IQGAP1	HGNC	ENSG00000140575	tier1	-	-	15	0	0.00	15	7	31.82
ITGA1	0	genome.wustl.edu	37	5	52194096	52194096	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	5	52194096	52194096	G	T	SNP	ITGA1	ENST00000282588	human	ensembl	74_37	+1	known	missense	c.1192	p.A398S	1.000	NULL	pfam_Integrin_alpha-2,pfam_VWF_A,pfam_FG-GAP,smart_Int_alpha_beta-p,smart_VWF_A,pfscan_VWF_A,prints_Integrin_alpha	-	no_errors	ITGA1	HGNC	ENSG00000213949	tier1	-	-	47	0	0.00	52	4	7.14
ITGB5	0	genome.wustl.edu	37	3	124538659	124538659	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	124538659	124538659	A	G	SNP	ITGB5	ENST00000296181	human	ensembl	74_37	-1	known	missense	c.965	p.L322P	1.000	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,smart_Integrin_bsu_N,smart_VWF_A,prints_Integrin_bsu	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_cyt_dom,pfam_Integrin_bsu_tail,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,smart_VWF_A,prints_Integrin_bsu	-	no_errors	ITGB5	HGNC	ENSG00000082781	tier1	-	-	51	0	0.00	106	24	18.46
KHDC3L	0	genome.wustl.edu	37	6	74072967	74072967	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	74072967	74072967	G	A	SNP	KHDC3L	ENST00000370367	human	ensembl	74_37	+1	known	missense	c.319	p.A107T	0.061	NULL	NULL	-	no_errors	KHDC3L	HGNC	ENSG00000203908	tier1	-	-	44	0	0.00	48	4	7.69
KIF18B	0	genome.wustl.edu	37	17	43013493	43013493	+	Silent	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	17	43013493	43013493	G	T	SNP	KIF18B	ENST00000339151	human	ensembl	74_37	-1	known	silent	c.220	p.R74	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF18B	HGNC	ENSG00000186185				79	0	0.00	72	4	5.26
KIF1B	0	genome.wustl.edu	37	1	10333085	10333085	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	1	10333085	10333085	G	T	SNP	KIF1B	ENST00000377081	human	ensembl	74_37	+1	putative	missense	c.878	p.S293I	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom	pfam_Kinesin_motor_dom,pfam_Kinesin-like,pfam_Pleckstrin_homology,pfam_KIF1B,pfam_FHA_dom,superfamily_P-loop_NTPase,superfamily_SMAD_FHA_domain,smart_Kinesin_motor_dom,smart_FHA_dom,smart_Pleckstrin_homology,pfscan_FHA_dom,pfscan_Pleckstrin_homology,pfscan_Kinesin_motor_dom,prints_Kinesin_motor_dom	-	no_errors	KIF1B	HGNC	ENSG00000054523	tier1	-	-	58	0	0.00	42	4	8.70
L3MBTL3	0	genome.wustl.edu	37	6	130415449	130415449	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	130415449	130415449	G	T	SNP	L3MBTL3	ENST00000361794	human	ensembl	74_37	+1	known	missense	c.1673	p.C558F	1.000	NULL	pfam_Mbt,pfam_SAM_type1,pfam_SAM_2,superfamily_SAM/pointed,smart_Mbt,smart_SAM,pfscan_Mbt,pfscan_SAM	-	no_errors	L3MBTL3	HGNC	ENSG00000198945	tier1	-	-	50	0	0.00	40	4	9.09
LEO1	0	genome.wustl.edu	37	15	52244058	52244058	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	15	52244058	52244058	G	A	SNP	LEO1	ENST00000299601	human	ensembl	74_37	-1	known	missense	c.1594	p.R532C	1.000	pfam_Leo1	pfam_Leo1	-	no_errors	LEO1	HGNC	ENSG00000166477	tier1	-	-	51	0	0.00	30	17	36.17
LGI1	0	genome.wustl.edu	37	10	95537161	95537161	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	10	95537161	95537161	G	T	SNP	LGI1	ENST00000371418	human	ensembl	74_37	+1	known	missense	c.313	p.V105L	1.000	smart_Leu-rich_rpt_typical-subtyp	pfam_EPTP,pfam_Leu-rich_rpt,superfamily_WD40_repeat_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,pfscan_EAR	-	no_errors	LGI1	HGNC	ENSG00000108231	tier1	-	-	47	0	0.00	62	4	6.06
LINC00693	0	genome.wustl.edu	37	3	28616545	28616545	+	RNA	SNP	C	C	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	28616545	28616545	C	G	SNP	LINC00693	ENST00000432518	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LINC00693	HGNC	ENSG00000228214	tier1	-	-	23	0	0.00	12	8	40.00
LIPN	0	genome.wustl.edu	37	10	90528642	90528642	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	10	90528642	90528642	G	A	SNP	LIPN	ENST00000404459	human	ensembl	74_37	+1	known	missense	c.629	p.G210D	0.014	pfam_AB_hydrolase_1	pfam_AB_hydrolase_lipase,pfam_AB_hydrolase_1	-	no_errors	LIPN	HGNC	ENSG00000204020	tier1	-	-	50	0	0.00	60	4	6.25
LMX1A	0	genome.wustl.edu	37	1	165218762	165218762	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	1	165218762	165218762	G	A	SNP	LMX1A	ENST00000294816	human	ensembl	74_37	-1	known	nonsense	c.379	p.R127*	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_Znf_LIM,pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Znf_LIM,smart_Homeobox_dom,pfscan_Znf_LIM,pfscan_Homeobox_dom	-	no_errors	LMX1A	HGNC	ENSG00000162761	tier1	-	-	43	0	0.00	16	14	46.67
LOC101928921	0	genome.wustl.edu	37	11	78807960	78807961	+	RNA	INS	-	-	GC			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	11	78807960	78807961	-	GC	INS	LOC101928921	ENST00000526091	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	CTD-2337I7.1	Clone_based_vega_gene	ENSG00000255345	tier1			20	0	0.00	11	2	15.38
LOC202181	0	genome.wustl.edu	37	5	177099071	177099071	+	RNA	SNP	A	A	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	5	177099071	177099071	A	G	SNP	LOC202181	ENST00000515045	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.988	-	-	-	no_errors	RP11-1277A3.2	Clone_based_vega_gene	ENSG00000246596				10	0	0.00	6	3	33.33
LPAR5	0	genome.wustl.edu	37	12	6729479	6729479	+	Silent	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	12	6729479	6729479	G	T	SNP	LPAR5	ENST00000329858	human	ensembl	74_37	-1	known	silent	c.936	p.G312	0.002	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	LPAR5	HGNC	ENSG00000184574				12	0	0.00	28	2	6.67
MALAT1	0	genome.wustl.edu	37	11	65271780	65271780	+	RNA	DEL	T	T	-			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	11	65271780	65271780	T	-	DEL	MALAT1	ENST00000534336	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	MALAT1	HGNC	ENSG00000251562	tier1			30	0	0.00	17	4	19.05
MAN1B1	0	genome.wustl.edu	37	9	139998105	139998105	+	RNA	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	9	139998105	139998105	C	A	SNP	MAN1B1	ENST00000540391	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.453	-	-	-	no_errors	MAN1B1	HGNC	ENSG00000177239	tier1	-	-	74	0	0.00	132	9	6.16
MAP1B	0	genome.wustl.edu	37	5	71493451	71493451	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	5	71493451	71493451	A	T	SNP	MAP1B	ENST00000296755	human	ensembl	74_37	+1	known	missense	c.4269	p.R1423S	0.228	NULL	pfam_MAP1B_neuraxin	-	no_errors	MAP1B	HGNC	ENSG00000131711	tier1	-	-	45	0	0.00	13	5	27.78
MICALL1	0	genome.wustl.edu	37	22	38328811	38328811	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	22	38328811	38328811	G	A	SNP	MICALL1	ENST00000215957	human	ensembl	74_37	+1	known	missense	c.2150	p.R717H	0.995	pfam_DUF3585	pfam_DUF3585,pfam_CH-domain,pfam_CAMSAP_CH,pfam_Znf_LIM,superfamily_CH-domain,smart_CH-domain,smart_Znf_LIM,pfscan_CH-domain,pfscan_Znf_LIM	-	no_errors	MICALL1	HGNC	ENSG00000100139	tier1	-	-	87	0	0.00	62	4	6.06
MIR720	0	genome.wustl.edu	37	3	164059129	164059129	+	RNA	SNP	C	C	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	164059129	164059129	C	G	SNP	MIR720	ENST00000408828	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.049	-	-	-	no_errors	MIR720	HGNC	ENSG00000221755	tier1	-	-	92	0	0.00	179	23	11.39
MLKL	0	genome.wustl.edu	37	16	74729477	74729477	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	16	74729477	74729477	G	T	SNP	MLKL	ENST00000308807	human	ensembl	74_37	-1	known	missense	c.179	p.T60K	0.000	NULL	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	MLKL	HGNC	ENSG00000168404				53	0	0.00	76	4	5.00
MLLT1	0	genome.wustl.edu	37	19	6230661	6230661	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	19	6230661	6230661	C	T	SNP	MLLT1	ENST00000252674	human	ensembl	74_37	-1	known	missense	c.340	p.V114M	1.000	NULL	pfam_YEATS,pfscan_YEATS	-	no_errors	MLLT1	HGNC	ENSG00000130382	tier1	-	-	51	0	0.00	34	4	10.53
MLLT3	0	genome.wustl.edu	37	9	20414280	20414280	+	Silent	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	9	20414280	20414280	G	A	SNP	MLLT3	ENST00000380338	human	ensembl	74_37	-1	known	silent	c.564	p.S188	1.000	NULL	pfam_YEATS,pfscan_YEATS	-	no_errors	MLLT3	HGNC	ENSG00000171843				37	0	0.00	26	2	7.14
MMP9	0	genome.wustl.edu	37	20	44637670	44637670	+	Silent	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	20	44637670	44637670	G	T	SNP	MMP9	ENST00000372330	human	ensembl	74_37	+1	known	silent	c.105	p.L35	0.003	superfamily_Peptidoglycan-bd-like	pfam_Pept_M10_metallopeptidase,pfam_FN_type2_col-bd,pfam_Hemopexin-like_repeat,pfam_PT,pfam_Peptidoglycan-bd-like,superfamily_Hemopexin-like_dom,superfamily_Kringle-like,superfamily_Peptidoglycan-bd-like,smart_Peptidase_Metallo,smart_FN_type2_col-bd,smart_Hemopexin-like_repeat,pfscan_FN_type2_col-bd,prints_Pept_M10A	-	no_errors	MMP9	HGNC	ENSG00000100985				36	0	0.00	32	2	5.88
MON2	0	genome.wustl.edu	37	12	62887805	62887805	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	12	62887805	62887805	C	A	SNP	MON2	ENST00000393630	human	ensembl	74_37	+1	known	missense	c.286	p.H96N	1.000	superfamily_ARM-type_fold	pfam_DUF1981_Sec7_assoc,superfamily_ARM-type_fold	-	no_errors	MON2	HGNC	ENSG00000061987	tier1	-	-	50	0	0.00	65	4	5.80
MPEG1	0	genome.wustl.edu	37	11	58979273	58979273	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	11	58979273	58979273	G	T	SNP	MPEG1	ENST00000361050	human	ensembl	74_37	-1	known	missense	c.1066	p.P356T	0.991	NULL	pfam_MACPF,smart_MACPF	-	no_errors	MPEG1	HGNC	ENSG00000197629				69	0	0.00	23	2	8.00
MTF2	0	genome.wustl.edu	37	1	93599533	93599533	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	1	93599533	93599533	A	G	SNP	MTF2	ENST00000370298	human	ensembl	74_37	+1	known	missense	c.1315	p.I439V	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Tudor,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	MTF2	HGNC	ENSG00000143033	tier1	-	-	36	0	0.00	10	8	44.44
MYO5C	0	genome.wustl.edu	37	15	52510733	52510733	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	15	52510733	52510733	G	T	SNP	MYO5C	ENST00000261839	human	ensembl	74_37	-1	known	missense	c.3937	p.L1313I	0.882	NULL	pfam_Myosin_head_motor_dom,pfam_Dil_domain,pfam_IQ_motif_EF-hand-BS,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_Dilute,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYO5C	HGNC	ENSG00000128833				46	0	0.00	73	5	6.41
NAA16	0	genome.wustl.edu	37	13	41894959	41894959	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	13	41894959	41894959	G	T	SNP	NAA16	ENST00000379406	human	ensembl	74_37	+1	known	missense	c.401	p.R134L	1.000	pirsf_NatA_aux_su,pfscan_TPR-contain_dom	pfam_TPR_2,pfam_NatA_aux_su,pfam_TPR_1,smart_TPR_repeat,pirsf_NatA_aux_su,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NAA16	HGNC	ENSG00000172766				47	0	0.00	30	2	6.25
NBEAL1	0	genome.wustl.edu	37	2	203972214	203972214	+	Silent	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	203972214	203972214	G	T	SNP	NBEAL1	ENST00000449802	human	ensembl	74_37	+1	known	silent	c.1254	p.L418	0.933	superfamily_ARM-type_fold	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NBEAL1	HGNC	ENSG00000144426				65	0	0.00	65	4	5.80
NCEH1	0	genome.wustl.edu	37	3	172428680	172428680	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	172428680	172428680	T	C	SNP	NCEH1	ENST00000538775	human	ensembl	74_37	-1	known	missense	c.191	p.K64R	1.000	pirsf_Arylacetamide_deacetylase	pfam_AB_hydrolase_3,pirsf_Arylacetamide_deacetylase	-	no_errors	NCEH1	HGNC	ENSG00000144959	tier1	-	-	48	0	0.00	97	30	23.62
NFATC1	0	genome.wustl.edu	37	18	77221366	77221366	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	18	77221366	77221366	G	A	SNP	NFATC1	ENST00000587635	human	ensembl	74_37	+1	novel	missense	c.1874	p.R625Q	0.684	NULL	pfam_RHD,superfamily_p53-like_TF_DNA-bd,pfscan_RHD	-	no_errors	NFATC1	HGNC	ENSG00000131196				100	0	0.00	50	3	5.66
NFATC2	0	genome.wustl.edu	37	20	50092014	50092014	+	Missense_Mutation	SNP	T	T	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	20	50092014	50092014	T	G	SNP	NFATC2	ENST00000396009	human	ensembl	74_37	-1	known	missense	c.1516	p.K506Q	0.987	pfam_RHD,superfamily_p53-like_TF_DNA-bd,pfscan_RHD	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	-	no_errors	NFATC2	HGNC	ENSG00000101096	tier1	-	-	76	0	0.00	70	4	5.41
NFE2L2	0	genome.wustl.edu	37	2	178098960	178098960	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	178098960	178098960	C	G	SNP	NFE2L2	ENST00000397062	human	ensembl	74_37	-1	known	missense	c.85	p.D29H	1.000	NULL	pfam_bZIP,superfamily_TF_DNA-bd,superfamily_Serpin_dom,smart_bZIP,pfscan_bZIP	-	no_errors	NFE2L2	HGNC	ENSG00000116044	tier1	-	-	20	0	0.00	47	15	24.19
NHSL2	0	genome.wustl.edu	37	X	71359849	71359849	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	X	71359849	71359849	G	T	SNP	NHSL2	ENST00000540800	human	ensembl	74_37	+1	known	missense	c.2451	p.Q817H	0.999	NULL	NULL	-	no_errors	NHSL2	HGNC	ENSG00000204131	tier1	-	-	32	0	0.00	17	3	15.00
NID1	0	genome.wustl.edu	37	1	236189263	236189263	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	1	236189263	236189263	G	T	SNP	NID1	ENST00000264187	human	ensembl	74_37	-1	known	missense	c.1917	p.F639L	0.958	superfamily_GFP,smart_G2_nidogen/fibulin_G2F,pfscan_G2_nidogen/fibulin_G2F	pfam_G2_nidogen/fibulin_G2F,pfam_LDLR_classB_rpt,pfam_Nidogen_extracell_dom,pfam_Thyroglobulin_1,pfam_EGF-like_Ca-bd_dom,superfamily_GFP,superfamily_Thyroglobulin_1,smart_Nidogen_extracell_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_G2_nidogen/fibulin_G2F,smart_Thyroglobulin_1,smart_LDLR_classB_rpt,pfscan_EG-like_dom,pfscan_LDLR_classB_rpt,pfscan_G2_nidogen/fibulin_G2F,pfscan_Thyroglobulin_1	-	no_errors	NID1	HGNC	ENSG00000116962				20	0	0.00	19	2	9.52
NLRC5	0	genome.wustl.edu	37	16	57079388	57079388	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	16	57079388	57079388	G	T	SNP	NLRC5	ENST00000262510	human	ensembl	74_37	+1	known	missense	c.3232	p.G1078W	0.009	NULL	pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_NACHT_NTPase	-	no_errors	NLRC5	HGNC	ENSG00000140853				18	0	0.00	26	3	10.34
NPC1L1	0	genome.wustl.edu	37	7	44573140	44573140	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	7	44573140	44573140	G	T	SNP	NPC1L1	ENST00000289547	human	ensembl	74_37	-1	known	missense	c.2299	p.P767T	1.000	pfam_Patched,pfscan_SSD	pfam_Patched,pfscan_SSD	-	no_errors	NPC1L1	HGNC	ENSG00000015520				24	0	0.00	23	3	11.54
NR1D1	0	genome.wustl.edu	37	17	38253410	38253410	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	17	38253410	38253410	G	T	SNP	NR1D1	ENST00000246672	human	ensembl	74_37	-1	known	missense	c.278	p.S93Y	0.983	NULL	pfam_Znf_hrmn_rcpt,pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,pfscan_Znf_hrmn_rcpt,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt	-	no_errors	NR1D1	HGNC	ENSG00000126368				72	0	0.00	69	4	5.48
NRAP	0	genome.wustl.edu	37	10	115364652	115364652	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	10	115364652	115364652	C	T	SNP	NRAP	ENST00000369358	human	ensembl	74_37	-1	known	missense	c.3967	p.E1323K	1.000	NULL	pfam_Nebulin_35r-motif,pfam_Znf_LIM,smart_Znf_LIM,smart_Nebulin_35r-motif,pfscan_Znf_LIM,pfscan_Nebulin_35r-motif,prints_Nebulin	-	no_errors	NRAP	HGNC	ENSG00000197893	tier1	-	-	31	0	0.00	37	4	9.76
NTPCR	0	genome.wustl.edu	37	1	233113960	233113960	+	Nonsense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	1	233113960	233113960	C	T	SNP	NTPCR	ENST00000366628	human	ensembl	74_37	+1	known	nonsense	c.556	p.Q186*	0.955	superfamily_P-loop_NTPase	pfam_Nuc-triphosphatase_THEP1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	NTPCR	HGNC	ENSG00000135778				54	0	0.00	32	2	5.88
OR1S1	0	genome.wustl.edu	37	11	57982677	57982677	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	11	57982677	57982677	G	T	SNP	OR1S1	ENST00000309433	human	ensembl	74_37	+1	known	missense	c.461	p.G154V	0.332	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR1S1	HGNC	ENSG00000172774				33	0	0.00	31	2	6.06
OR4C6	0	genome.wustl.edu	37	11	55432949	55432949	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	11	55432949	55432949	C	G	SNP	OR4C6	ENST00000314259	human	ensembl	74_37	+1	known	missense	c.307	p.H103D	0.713	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4C6	HGNC	ENSG00000181903	tier1	-	-	23	0	0.00	9	7	43.75
OR5H1	0	genome.wustl.edu	37	3	97851821	97851821	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	97851821	97851821	C	G	SNP	OR5H1	ENST00000354565	human	ensembl	74_37	+1	known	missense	c.280	p.L94V	0.009	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5H1	HGNC	ENSG00000231192	tier1	-	-	71	0	0.00	105	19	15.32
OTOP2	0	genome.wustl.edu	37	17	72926446	72926446	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	17	72926446	72926446	G	T	SNP	OTOP2	ENST00000331427	human	ensembl	74_37	+1	known	missense	c.716	p.G239V	1.000	pfam_Otopetrin	pfam_Otopetrin	-	no_errors	OTOP2	HGNC	ENSG00000183034				39	0	0.00	28	4	12.50
PELI1	0	genome.wustl.edu	37	2	64322157	64322157	+	Silent	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	64322157	64322157	G	T	SNP	PELI1	ENST00000358912	human	ensembl	74_37	-1	known	silent	c.936	p.G312	0.998	pfam_Pellino_fam	pfam_Pellino_fam	-	no_errors	PELI1	HGNC	ENSG00000197329	tier1	-	-	28	0	0.00	36	4	9.76
PEX3	0	genome.wustl.edu	37	6	143800301	143800301	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	143800301	143800301	G	T	SNP	PEX3	ENST00000367591	human	ensembl	74_37	+1	known	nonsense	c.907	p.E303*	1.000	pfam_Peroxin-3	pfam_Peroxin-3	-	no_errors	PEX3	HGNC	ENSG00000034693	tier1	-	-	57	0	0.00	36	4	10.00
PHLDB2	0	genome.wustl.edu	37	3	111603468	111603468	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	111603468	111603468	G	T	SNP	PHLDB2	ENST00000393925	human	ensembl	74_37	+1	known	nonsense	c.544	p.G182*	1.000	NULL	pfam_Pleckstrin_homology,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology	-	no_errors	PHLDB2	HGNC	ENSG00000144824				27	0	0.00	61	4	6.15
PHYHD1	0	genome.wustl.edu	37	9	131702968	131702968	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	9	131702968	131702968	T	C	SNP	PHYHD1	ENST00000308941	human	ensembl	74_37	+1	known	missense	c.655	p.S219P	0.199	NULL	pfam_Phytyl_CoA_dOase	-	no_errors	PHYHD1	HGNC	ENSG00000175287	tier1	-	-	75	0	0.00	21	49	70.00
PILRB	0	genome.wustl.edu	37	7	99956495	99956495	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	7	99956495	99956495	A	G	SNP	PILRB	ENST00000444073	human	ensembl	74_37	+1	known	missense	c.247	p.S83G	0.026	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Ig_V-set,smart_Ig_sub,pfscan_Ig-like_dom	-	no_errors	PILRB	HGNC	ENSG00000121716				46	0	0.00	46	5	9.80
PIP4K2B	0	genome.wustl.edu	37	17	36935734	36935734	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	17	36935734	36935734	T	C	SNP	PIP4K2B	ENST00000269554	human	ensembl	74_37	-1	known	missense	c.556	p.M186V	1.000	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	pfam_PInositol-4-P-5-kinase_core,smart_PInositol-4P-5-kinase_core_sub	-	no_errors	PIP4K2B	HGNC	ENSG00000141720	tier1	-	-	51	0	0.00	43	20	31.75
PKHD1L1	0	genome.wustl.edu	37	8	110492355	110492355	+	Missense_Mutation	SNP	A	A	C			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	8	110492355	110492355	A	C	SNP	PKHD1L1	ENST00000378402	human	ensembl	74_37	+1	known	missense	c.9314	p.Y3105S	1.000	pfam_G8_domain	pfam_IPT,pfam_G8_domain,pfam_PA14,superfamily_Ig_E-set,superfamily_Pectin_lyase_fold/virulence,superfamily_Cupredoxin,smart_IPT,smart_PA14,smart_PbH1	-	no_errors	PKHD1L1	HGNC	ENSG00000205038				27	0	0.00	19	6	24.00
PRDM9	0	genome.wustl.edu	37	5	23509631	23509631	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	5	23509631	23509631	C	A	SNP	PRDM9	ENST00000296682	human	ensembl	74_37	+1	known	missense	c.122	p.A41E	0.958	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	pfam_Znf_C2H2,pfam_SSXRD_motif,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_SET_dom,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Krueppel-associated_box-rel	-	no_errors	PRDM9	HGNC	ENSG00000164256				89	0	0.00	45	3	6.12
PSMD2	0	genome.wustl.edu	37	3	184024572	184024572	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	184024572	184024572	A	G	SNP	PSMD2	ENST00000310118	human	ensembl	74_37	+1	known	missense	c.1984	p.M662V	1.000	superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn1	pfam_Proteasome/cyclosome_rpt,superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn1	-	no_errors	PSMD2	HGNC	ENSG00000175166	tier1	-	-	76	0	0.00	166	34	17.00
PXDNL	0	genome.wustl.edu	37	8	52323921	52323921	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	8	52323921	52323921	G	T	SNP	PXDNL	ENST00000356297	human	ensembl	74_37	-1	known	missense	c.1951	p.R651S	0.003	NULL	pfam_Haem_peroxidase_animal,pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_VWF_C,pfam_Leu-rich_rpt,superfamily_Haem_peroxidase,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,smart_VWF_C,prints_Haem_peroxidase_animal_subgr,pfscan_VWF_C,pfscan_Haem_peroxidase_animal,pfscan_Ig-like_dom	-	no_errors	PXDNL	HGNC	ENSG00000147485				43	0	0.00	53	3	5.36
R3HDM2	0	genome.wustl.edu	37	12	57663120	57663120	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	12	57663120	57663120	G	T	SNP	R3HDM2	ENST00000347140	human	ensembl	74_37	-1	known	missense	c.1658	p.P553Q	1.000	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	R3HDM2	HGNC	ENSG00000179912	tier1	-	-	70	0	0.00	51	4	7.27
RAB2A	0	genome.wustl.edu	37	8	61496838	61496838	+	Silent	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	8	61496838	61496838	C	T	SNP	RAB2A	ENST00000262646	human	ensembl	74_37	+1	known	silent	c.258	p.Y86	1.000	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,pfam_EF_GTP-bd_dom,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	-	no_errors	RAB2A	HGNC	ENSG00000104388	tier1	-	-	76	0	0.00	35	32	47.76
RAB3GAP1	0	genome.wustl.edu	37	2	135920326	135920326	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	135920326	135920326	G	T	SNP	RAB3GAP1	ENST00000264158	human	ensembl	74_37	+1	known	nonsense	c.2395	p.E799*	1.000	NULL	NULL	-	no_errors	RAB3GAP1	HGNC	ENSG00000115839	tier1	-	-	31	0	0.00	19	3	13.64
RBAK	0	genome.wustl.edu	37	7	5103473	5103473	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	7	5103473	5103473	C	A	SNP	RBAK	ENST00000353796	human	ensembl	74_37	+1	known	missense	c.386	p.P129H	0.016	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	RBAK	HGNC	ENSG00000146587	tier1	-	-	72	0	0.00	60	4	6.25
RBM14	0	genome.wustl.edu	37	11	66391808	66391808	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	11	66391808	66391808	G	T	SNP	RBM14	ENST00000310137	human	ensembl	74_37	+1	known	missense	c.461	p.G154V	1.000	NULL	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	RBM14	HGNC	ENSG00000239306	tier1	-	-	94	0	0.00	38	4	9.52
RBM5	0	genome.wustl.edu	37	3	50150892	50150892	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	50150892	50150892	C	T	SNP	RBM5	ENST00000347869	human	ensembl	74_37	+1	known	missense	c.1532	p.S511F	0.008	NULL	pfam_G_patch_dom,pfam_RRM_dom,pfam_Znf_RanBP2,smart_RRM_dom,smart_Znf_RanBP2,smart_G_patch_dom,pfscan_Znf_RanBP2,pfscan_Znf_C2H2,pfscan_G_patch_dom,pfscan_RRM_dom	-	no_errors	RBM5	HGNC	ENSG00000003756	tier1	-	-	55	0	0.00	21	24	53.33
RGS22	0	genome.wustl.edu	37	8	101018284	101018284	+	Silent	SNP	T	T	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	8	101018284	101018284	T	A	SNP	RGS22	ENST00000360863	human	ensembl	74_37	-1	known	silent	c.2415	p.L805	0.984	NULL	pfam_RGS_dom,superfamily_Regulat_G_prot_signal_superfam,smart_Regulat_G_prot_signal_superfam,pfscan_Regulat_G_prot_signal_superfam	-	no_errors	RGS22	HGNC	ENSG00000132554				28	0	0.00	32	5	13.51
RUFY2	0	genome.wustl.edu	37	10	70154087	70154087	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	10	70154087	70154087	G	T	SNP	RUFY2	ENST00000388768	human	ensembl	74_37	-1	known	missense	c.625	p.Q209K	1.000	NULL	pfam_Run,pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Run,smart_Znf_FYVE,pfscan_Run,pfscan_Znf_FYVE-rel	-	no_errors	RUFY2	HGNC	ENSG00000204130				74	0	0.00	69	4	5.48
RUNX2	0	genome.wustl.edu	37	6	45514591	45514591	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	45514591	45514591	A	T	SNP	RUNX2	ENST00000352853	human	ensembl	74_37	+1	known	missense	c.1319	p.D440V	1.000	NULL	pfam_Runt_dom,pfam_RunxI_C_dom,superfamily_p53-like_TF_DNA-bd,pfscan_Runt_dom,prints_AML1_Runt	-	no_errors	RUNX2	HGNC	ENSG00000124813	tier1	-	-	32	0	0.00	29	14	32.56
RYR3	0	genome.wustl.edu	37	15	34105086	34105086	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	15	34105086	34105086	G	A	SNP	RYR3	ENST00000389232	human	ensembl	74_37	+1	known	nonsense	c.10280	p.W3427*	1.000	superfamily_ARM-type_fold	pfam_Ryanodine_rcpt,pfam_Ca-rel_channel,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,superfamily_4_helix_cytokine-like_core,superfamily_ARM-type_fold,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR3	HGNC	ENSG00000198838	tier1	-	-	83	0	0.00	32	17	34.69
SASS6	0	genome.wustl.edu	37	1	100568546	100568546	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	1	100568546	100568546	C	T	SNP	SASS6	ENST00000287482	human	ensembl	74_37	-1	known	missense	c.1639	p.A547T	0.951	NULL	NULL	-	no_errors	SASS6	HGNC	ENSG00000156876	tier1	-	-	46	0	0.00	30	4	11.76
SCAF4	0	genome.wustl.edu	37	21	33063188	33063188	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	21	33063188	33063188	G	A	SNP	SCAF4	ENST00000286835	human	ensembl	74_37	-1	known	missense	c.1807	p.P603S	1.000	NULL	pfam_RNA_pol_II-bd,pfam_RRM_dom,superfamily_ENTH_VHS,smart_CID_dom,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	SCAF4	HGNC	ENSG00000156304	tier1	-	-	49	0	0.00	33	24	42.11
SCN7A	0	genome.wustl.edu	37	2	167262253	167262253	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	167262253	167262253	G	T	SNP	SCN7A	ENST00000409855	human	ensembl	74_37	-1	known	missense	c.4886	p.A1629E	1.000	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,prints_Na_channel_asu	-	no_errors	SCN7A	HGNC	ENSG00000136546				31	0	0.00	35	2	5.41
SCUBE3	0	genome.wustl.edu	37	6	35205712	35205712	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	35205712	35205712	G	A	SNP	SCUBE3	ENST00000394681	human	ensembl	74_37	+1	known	missense	c.794	p.S265N	1.000	smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,prints_Thrombomodulin	pfam_EGF-like_Ca-bd_dom,pfam_Tyr-kin_ephrin_A/B_rcpt-like,pfam_EG-like_dom,pfam_CUB_dom,superfamily_CUB_dom,superfamily_Growth_fac_rcpt_N_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_CUB_dom,pfscan_CUB_dom,pfscan_EG-like_dom,prints_Thrombomodulin	-	no_errors	SCUBE3	HGNC	ENSG00000146197	tier1	-	-	84	0	0.00	43	22	33.85
SEMA4F	0	genome.wustl.edu	37	2	74902937	74902937	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	74902937	74902937	G	A	SNP	SEMA4F	ENST00000357877	human	ensembl	74_37	+1	known	missense	c.1544	p.R515H	0.429	pfam_Plexin_repeat,superfamily_Plexin-like_fold,smart_Plexin-like_fold	pfam_Semap_dom,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,pfscan_Semap_dom	-	no_errors	SEMA4F	HGNC	ENSG00000135622	tier1	-	-	39	0	0.00	33	18	35.29
SERPINA6	0	genome.wustl.edu	37	14	94780486	94780486	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	14	94780486	94780486	C	T	SNP	SERPINA6	ENST00000341584	human	ensembl	74_37	-1	known	missense	c.500	p.S167N	0.076	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	pfam_Serpin_dom,superfamily_Serpin_dom,smart_Serpin_dom	-	no_errors	SERPINA6	HGNC	ENSG00000170099				49	0	0.00	39	3	6.98
SKIDA1	0	genome.wustl.edu	37	10	21805720	21805720	+	Silent	SNP	A	A	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	10	21805720	21805720	A	G	SNP	SKIDA1	ENST00000449193	human	ensembl	74_37	-1	known	silent	c.1032	p.H344	0.972	NULL	pfam_Transform_Ski,superfamily_DNA-bd_dom_put	-	no_errors	SKIDA1	HGNC	ENSG00000180592				14	0	0.00	41	4	8.89
SLC22A24	0	genome.wustl.edu	37	11	62886317	62886317	+	Silent	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	11	62886317	62886317	C	T	SNP	SLC22A24	ENST00000326192	human	ensembl	74_37	-1	known	silent	c.897	p.L299	0.001	pfscan_MFS_dom	pfam_MFS,pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC22A24	HGNC	ENSG00000197658	tier1	-	-	62	0	0.00	18	23	56.10
SLC30A5	0	genome.wustl.edu	37	5	68423939	68423939	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	5	68423939	68423939	G	C	SNP	SLC30A5	ENST00000396591	human	ensembl	74_37	+1	known	missense	c.2107	p.E703Q	1.000	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A5	HGNC	ENSG00000145740	tier1	-	-	65	0	0.00	39	11	22.00
SLC51B	0	genome.wustl.edu	37	15	65342383	65342383	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	15	65342383	65342383	C	T	SNP	SLC51B	ENST00000334287	human	ensembl	74_37	+1	known	missense	c.41	p.T14I	0.004	NULL	NULL	-	no_errors	SLC51B	HGNC	ENSG00000186198	tier1	-	-	51	0	0.00	48	4	7.69
SMAD2	0	genome.wustl.edu	37	18	45395775	45395775	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	18	45395775	45395775	C	A	SNP	SMAD2	ENST00000262160	human	ensembl	74_37	-1	known	missense	c.359	p.R120L	1.000	pfam_MAD_homology1_Dwarfin-type,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,pfscan_MAD_homology_MH1	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD2	HGNC	ENSG00000175387				42	0	0.00	36	2	5.26
SNORA76	0	genome.wustl.edu	37	17	62223820	62223820	+	RNA	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	17	62223820	62223820	C	T	SNP	SNORA76	ENST00000408535	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNORA76	HGNC	ENSG00000266402				58	0	0.00	68	4	5.56
SNTG2	0	genome.wustl.edu	37	2	1371139	1371139	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	1371139	1371139	G	T	SNP	SNTG2	ENST00000308624	human	ensembl	74_37	+1	known	missense	c.1513	p.A505S	0.239	NULL	pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SNTG2	HGNC	ENSG00000172554				28	0	0.00	46	5	9.80
SNX29P2	0	genome.wustl.edu	37	16	29376056	29376056	+	RNA	SNP	T	T	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	16	29376056	29376056	T	A	SNP	SNX29P2	ENST00000356328	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SNX29P2	HGNC	ENSG00000198106				57	0	0.00	50	5	9.09
SPAG1	0	genome.wustl.edu	37	8	101203620	101203620	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	8	101203620	101203620	C	A	SNP	SPAG1	ENST00000251809	human	ensembl	74_37	+1	known	missense	c.835	p.L279I	1.000	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	SPAG1	HGNC	ENSG00000104450				45	0	0.00	19	2	9.52
SPATA31D1	0	genome.wustl.edu	37	9	84606906	84606906	+	Silent	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	9	84606906	84606906	C	T	SNP	SPATA31D1	ENST00000344803	human	ensembl	74_37	+1	known	silent	c.1521	p.L507	0.684	NULL	NULL	-	no_errors	SPATA31D1	HGNC	ENSG00000214929	tier1	-	-	90	0	0.00	148	27	15.43
SPATA9	0	genome.wustl.edu	37	5	95018554	95018554	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	5	95018554	95018554	G	T	SNP	SPATA9	ENST00000274432	human	ensembl	74_37	-1	known	missense	c.5	p.P2Q	0.955	NULL	NULL	-	no_errors	SPATA9	HGNC	ENSG00000145757				54	0	0.00	68	4	5.56
SPG11	0	genome.wustl.edu	37	15	44887495	44887495	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	15	44887495	44887495	T	A	SNP	SPG11	ENST00000261866	human	ensembl	74_37	-1	known	missense	c.4597	p.S1533C	0.999	NULL	NULL	-	no_errors	SPG11	HGNC	ENSG00000104133	tier1	-	-	40	0	0.00	45	11	19.64
SPTBN4	0	genome.wustl.edu	37	19	41008712	41008712	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	19	41008712	41008712	G	T	SNP	SPTBN4	ENST00000352632	human	ensembl	74_37	+1	known	nonsense	c.1234	p.E412*	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN4	HGNC	ENSG00000160460	tier1	-	-	20	0	0.00	15	3	16.67
SRRM3	0	genome.wustl.edu	37	7	75890892	75890892	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	7	75890892	75890892	C	T	SNP	SRRM3	ENST00000388802	human	ensembl	74_37	+1	known	missense	c.667	p.R223W	1.000	NULL	pfam_mRNA_splic_Cwf21	-	no_errors	SRRM3	HGNC	ENSG00000177679	tier1	-	-	51	0	0.00	47	4	7.84
STAG3L4	0	genome.wustl.edu	37	7	66767623	66767623	+	RNA	SNP	T	T	C			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	7	66767623	66767623	T	C	SNP	STAG3L4	ENST00000416602	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.016	-	-	-	no_errors	STAG3L4	HGNC	ENSG00000106610	tier1	-	-	78	0	0.00	79	6	6.90
STK4	0	genome.wustl.edu	37	20	43623730	43623730	+	Splice_Site	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	20	43623730	43623730	G	A	SNP	STK4	ENST00000372806	human	ensembl	74_37	+1	known	splice_site	c.526-1	e6-1	1.000	-	-	-	no_errors	STK4	HGNC	ENSG00000101109	tier1	-	-	110	0	0.00	73	4	5.19
TCHH	0	genome.wustl.edu	37	1	152084720	152084720	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	1	152084720	152084720	G	C	SNP	TCHH	ENST00000368804	human	ensembl	74_37	-1	known	missense	c.973	p.Q325E	0.000	NULL	pfam_S100_Ca-bd_sub,pfscan_EF_hand_dom	-	no_errors	TCHH	HGNC	ENSG00000159450	tier1	-	-	43	0	0.00	78	7	8.24
TENM2	0	genome.wustl.edu	37	5	167420090	167420090	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	5	167420090	167420090	G	T	SNP	TENM2	ENST00000518659	human	ensembl	74_37	+1	known	missense	c.1089	p.K363N	1.000	pfam_Ten_N	pfam_Ten_N,pfam_EGF_extracell,superfamily_CarboxyPept-like_regulatory,superfamily_Quino_amine_DH_bsu,superfamily_ConA-like_lec_gl_sf,superfamily_Cytokine_IL1-like,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,tigrfam_YD,tigrfam_Rhs_assc_core	-	no_errors	TENM2	HGNC	ENSG00000145934	tier1	-	-	59	0	0.00	44	4	8.33
THSD4	0	genome.wustl.edu	37	15	72050278	72050278	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	15	72050278	72050278	C	T	SNP	THSD4	ENST00000261862	human	ensembl	74_37	+1	known	missense	c.2453	p.S818L	0.969	superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_Thrombospondin_1_rpt	pfam_ADAM_spacer1,pfam_Thrombospondin_1_rpt,pfam_PLAC,superfamily_Thrombospondin_1_rpt,smart_Thrombospondin_1_rpt,pfscan_PLAC,pfscan_Thrombospondin_1_rpt	-	no_errors	THSD4	HGNC	ENSG00000187720	tier1	-	-	24	0	0.00	17	10	37.04
TMEM150A	0	genome.wustl.edu	37	2	85826346	85826346	+	Silent	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	85826346	85826346	G	T	SNP	TMEM150A	ENST00000334462	human	ensembl	74_37	-1	known	silent	c.669	p.G223	1.000	pfam_Frag1/DRAM/Sfk1	pfam_Frag1/DRAM/Sfk1	-	no_errors	TMEM150A	HGNC	ENSG00000168890	tier1	-	-	70	0	0.00	56	4	6.67
TMEM239	0	genome.wustl.edu	37	20	2795992	2795992	+	Frame_Shift_Del	DEL	G	G	-			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	20	2795992	2795992	G	-	DEL	TMEM239	ENST00000554164	human	ensembl	74_37	+1	known	frame_shift_del	c.162	p.A56fs	0.954	NULL	NULL	-	no_errors	TMEM239	HGNC	ENSG00000198326	tier1			33	0	0.00	22	2	8.33
TOMM70A	0	genome.wustl.edu	37	3	100105093	100105093	+	Silent	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	100105093	100105093	C	T	SNP	TOMM70A	ENST00000284320	human	ensembl	74_37	-1	known	silent	c.594	p.E198	1.000	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TOMM70A	HGNC	ENSG00000154174	tier1	-	-	61	0	0.00	91	27	22.88
TP53	0	genome.wustl.edu	37	17	7578223	7578223	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	17	7578223	7578223	C	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.626	p.R209K	0.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	101	0	0.00	21	26	55.32
TP53	0	genome.wustl.edu	37	17	7578265	7578265	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	17	7578265	7578265	A	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.584	p.I195N	1.000	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	107	0	0.00	18	25	58.14
TRIB2	0	genome.wustl.edu	37	2	12880890	12880890	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	2	12880890	12880890	G	T	SNP	TRIB2	ENST00000155926	human	ensembl	74_37	+1	known	missense	c.1002	p.M334I	1.000	superfamily_Kinase-like_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	TRIB2	HGNC	ENSG00000071575				35	0	0.00	44	3	6.38
TRPM1	0	genome.wustl.edu	37	15	31325061	31325061	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	15	31325061	31325061	G	T	SNP	TRPM1	ENST00000542188	human	ensembl	74_37	-1	known	missense	c.2834	p.A945D	1.000	pfam_Ion_trans_dom	pfam_Ion_trans_dom	-	no_errors	TRPM1	HGNC	ENSG00000134160	tier1	-	-	75	0	0.00	64	4	5.88
TRRAP	0	genome.wustl.edu	37	7	98579513	98579513	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	7	98579513	98579513	G	A	SNP	TRRAP	ENST00000359863	human	ensembl	74_37	+1	known	missense	c.8735	p.S2912N	1.000	pfam_PIK-rel_kinase_FAT,pfscan_PIK_FAT	pfam_PIK-rel_kinase_FAT,pfam_PI3/4_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,smart_PI3/4_kinase_cat_dom,pfscan_PIK_FAT,pfscan_FATC,pfscan_PI3/4_kinase_cat_dom	-	no_errors	TRRAP	HGNC	ENSG00000196367	tier1	-	-	26	0	0.00	34	5	12.82
TTC14	0	genome.wustl.edu	37	3	180328087	180328087	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	180328087	180328087	C	G	SNP	TTC14	ENST00000296015	human	ensembl	74_37	+1	known	missense	c.2070	p.H690Q	0.000	NULL	pfam_TPR_1,superfamily_NA-bd_OB-fold,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	TTC14	HGNC	ENSG00000163728	tier1	-	-	47	0	0.00	60	15	20.00
TTC21A	0	genome.wustl.edu	37	3	39172257	39172257	+	Silent	SNP	C	C	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	39172257	39172257	C	A	SNP	TTC21A	ENST00000301819	human	ensembl	74_37	+1	known	silent	c.2409	p.G803	0.861	smart_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	TTC21A	HGNC	ENSG00000168026	tier1	-	-	56	0	0.00	35	4	10.26
UBR1	0	genome.wustl.edu	37	15	43367261	43367261	+	Silent	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	15	43367261	43367261	G	A	SNP	UBR1	ENST00000290650	human	ensembl	74_37	-1	known	silent	c.444	p.F148	0.999	pfam_Znf_N-recognin,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	pfam_ClpS_core,pfam_Znf_N-recognin,superfamily_Ribosomal_L7/12_C/ClpS-like,smart_Znf_N-recognin_met,pfscan_Znf_N-recognin	-	no_errors	UBR1	HGNC	ENSG00000159459	tier1	-	-	29	0	0.00	35	23	39.66
USP46	0	genome.wustl.edu	37	4	53494205	53494205	+	Silent	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	4	53494205	53494205	C	T	SNP	USP46	ENST00000441222	human	ensembl	74_37	-1	known	silent	c.243	p.A81	0.988	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP46	HGNC	ENSG00000109189	tier1	-	-	71	0	0.00	62	23	27.06
USP9Y	0	genome.wustl.edu	37	Y	14968773	14968773	+	RNA	DEL	A	A	-			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	Y	14968773	14968773	A	-	DEL	USP9Y	ENST00000471409	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.995	-	-	-	no_errors	USP9Y	HGNC	ENSG00000114374	tier1			27	0	0.00	9	3	25.00
UTP14A	0	genome.wustl.edu	37	X	129047355	129047356	+	Frame_Shift_Ins	INS	-	-	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	X	129047355	129047356	-	A	INS	UTP14A	ENST00000371042	human	ensembl	74_37	+1	known	frame_shift_ins	c.17_18	p.K10fs	0.814:0.011	pfam_SSU_processome_Utp14	pfam_SSU_processome_Utp14	-	no_errors	UTP14A	HGNC	ENSG00000156697	tier1			65	0	0.00	41	7	14.58
VPS4A	0	genome.wustl.edu	37	16	69349973	69349973	+	Silent	SNP	G	G	A			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	16	69349973	69349973	G	A	SNP	VPS4A	ENST00000254950	human	ensembl	74_37	+1	known	silent	c.84	p.A28	0.222	pfam_MIT,smart_MIT	pfam_ATPase_AAA_core,pfam_Vps4_C,pfam_MIT,pfam_IstB_ATP-bd,pfam_ATPase_dyneun-rel_AAA,pfam_DNA_helicase_Holl-junc_RuvB_N,superfamily_P-loop_NTPase,smart_MIT,smart_AAA+_ATPase	-	no_errors	VPS4A	HGNC	ENSG00000132612	tier1	-	-	47	0	0.00	43	5	10.42
WDFY4	0	genome.wustl.edu	37	10	49996594	49996594	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	10	49996594	49996594	A	T	SNP	WDFY4	ENST00000325239	human	ensembl	74_37	+1	known	missense	c.3828	p.E1276D	0.002	NULL	pfam_BEACH_dom,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDFY4	HGNC	ENSG00000128815	tier1	-	-	93	0	0.00	63	21	25.00
WHSC1	0	genome.wustl.edu	37	4	1959724	1959724	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	4	1959724	1959724	G	T	SNP	WHSC1	ENST00000382891	human	ensembl	74_37	+1	known	missense	c.2946	p.Q982H	0.999	NULL	pfam_PWWP_dom,pfam_SET_dom,pfam_Znf_PHD-finger,pfam_HMG_box_dom,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_PWWP_dom,smart_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_AWS,smart_SET_dom,smart_Post-SET_dom,pfscan_AWS,pfscan_PWWP_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_RING,pfscan_HMG_box_dom	-	no_errors	WHSC1	HGNC	ENSG00000109685	tier1	-	-	47	0	0.00	20	4	16.67
WTAP	0	genome.wustl.edu	37	6	160176201	160176201	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	6	160176201	160176201	G	T	SNP	WTAP	ENST00000358372	human	ensembl	74_37	+1	known	missense	c.749	p.S250I	0.516	NULL	NULL	-	no_errors	WTAP	HGNC	ENSG00000146457				25	0	0.00	25	2	7.14
XPR1	0	genome.wustl.edu	37	1	180601390	180601390	+	Missense_Mutation	SNP	A	A	C			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	1	180601390	180601390	A	C	SNP	XPR1	ENST00000367590	human	ensembl	74_37	+1	known	missense	c.53	p.Q18P	1.000	pfam_SPX_N	pfam_EXS_C,pfam_SPX_N	-	no_errors	XPR1	HGNC	ENSG00000143324	tier1	-	-	83	0	0.00	67	8	10.67
ZNF140	0	genome.wustl.edu	37	12	133682650	133682650	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	12	133682650	133682650	C	T	SNP	ZNF140	ENST00000355557	human	ensembl	74_37	+1	known	missense	c.787	p.H263Y	1.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF140	HGNC	ENSG00000196387	tier1	-	-	33	0	0.00	28	9	24.32
ZNF254	0	genome.wustl.edu	37	19	24309076	24309076	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	19	24309076	24309076	C	G	SNP	ZNF254	ENST00000357002	human	ensembl	74_37	+1	known	missense	c.274	p.Q92E	0.000	NULL	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF254	HGNC	ENSG00000213096	tier1	-	-	49	0	0.00	24	14	36.84
ZNF257	0	genome.wustl.edu	37	19	22271249	22271249	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	19	22271249	22271249	G	T	SNP	ZNF257	ENST00000594947	human	ensembl	74_37	+1	known	nonsense	c.697	p.E233*	0.066	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF257	HGNC	ENSG00000197134	tier1	-	-	57	0	0.00	35	10	22.22
ZNF268	0	genome.wustl.edu	37	12	133779243	133779243	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	12	133779243	133779243	G	T	SNP	ZNF268	ENST00000228289	human	ensembl	74_37	+1	known	missense	c.971	p.R324I	0.631	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF268	HGNC	ENSG00000090612				42	0	0.00	34	2	5.56
ZNF274	0	genome.wustl.edu	37	19	58723016	58723016	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	19	58723016	58723016	G	T	SNP	ZNF274	ENST00000326804	human	ensembl	74_37	+1	known	missense	c.940	p.V314L	0.998	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,pfam_Tscrpt_reg_SCAN,pfam_Znf_C2H2,superfamily_Retrov_capsid_C,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Tscrpt_reg_SCAN,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box,pfscan_Tscrpt_reg_SCAN	-	no_errors	ZNF274	HGNC	ENSG00000171606	tier1	-	-	52	0	0.00	41	4	8.89
ZNF548	0	genome.wustl.edu	37	19	57910927	57910927	+	Silent	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	19	57910927	57910927	C	T	SNP	ZNF548	ENST00000336128	human	ensembl	74_37	+1	known	silent	c.1308	p.S436	0.000	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF548	HGNC	ENSG00000188785	tier1	-	-	70	0	0.00	35	13	27.08
ZNF660	0	genome.wustl.edu	37	3	44636478	44636478	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	3	44636478	44636478	C	-	DEL	ZNF660	ENST00000322734	human	ensembl	74_37	+1	known	frame_shift_del	c.793	p.Q265fs	0.996	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF660	HGNC	ENSG00000144792	tier1			57	0	0.00	19	2	9.52
ZNF831	0	genome.wustl.edu	37	20	57770966	57770966	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	20	57770966	57770966	G	T	SNP	ZNF831	ENST00000371030	human	ensembl	74_37	+1	novel	missense	c.3781	p.V1261L	0.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF831	HGNC	ENSG00000124203	tier1	-	-	67	0	0.00	73	4	5.19
ZXDB	0	genome.wustl.edu	37	X	57620063	57620063	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-A8ER-01A-11D-A36J-09	TCGA-VR-A8ER-10A-01D-A36M-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	4287c063-759e-4890-b9ae-7fd4d4024def	df77230e-6025-40d1-9b1a-862fdea0faeb	X	57620063	57620063	C	T	SNP	ZXDB	ENST00000374888	human	ensembl	74_37	+1	known	missense	c.1582	p.R528C	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZXDB	HGNC	ENSG00000198455	tier1	-	-	23	0	0.00	10	17	62.96
