Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ABCA8	0	genome.wustl.edu	37	17	66925797	66925797	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	17	66925797	66925797	G	T	SNP	ABCA8	ENST00000430352	human	ensembl	74_37	-1	known	missense	c.844	p.L282I	0.005	NULL	pfam_ABC_transporter-like,superfamily_P-loop_NTPase,smart_AAA+_ATPase,pfscan_ABC_transporter-like	-	no_errors	ABCA8	HGNC	ENSG00000141338	tier1	-	-	47	0	0.00	37	4	9.76
ABCC11	0	genome.wustl.edu	37	16	48247407	48247407	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	16	48247407	48247407	G	A	SNP	ABCC11	ENST00000356608	human	ensembl	74_37	-1	known	missense	c.1303	p.P435S	0.641	superfamily_ABC1_TM_dom,pfscan_ABC1_TM_dom	pfam_ABC_transptr_TM_dom,pfam_ABC_transporter-like,superfamily_P-loop_NTPase,superfamily_ABC1_TM_dom,smart_AAA+_ATPase,pfscan_ABC_transporter-like,pfscan_ABC1_TM_dom	-	no_errors	ABCC11	HGNC	ENSG00000121270	tier1	-	-	51	0	0.00	41	4	8.89
ABHD17B	0	genome.wustl.edu	37	9	74489614	74489614	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	9	74489614	74489614	G	T	SNP	ABHD17B	ENST00000377041	human	ensembl	74_37	-1	known	missense	c.383	p.S128Y	1.000	NULL	pfam_Peptidase_S9,pfam_Dienelactn_hydro	-	no_errors	ABHD17B	HGNC	ENSG00000107362	tier1	-	-	33	0	0.00	47	4	7.84
AFG3L2	0	genome.wustl.edu	37	18	12351111	12351111	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	18	12351111	12351111	G	T	SNP	AFG3L2	ENST00000269143	human	ensembl	74_37	-1	known	missense	c.1525	p.L509M	1.000	superfamily_P-loop_NTPase,tigrfam_FtsH	pfam_Peptidase_M41,pfam_ATPase_AAA_core,pfam_Pept_M41_FtsH_extracell,superfamily_P-loop_NTPase,smart_AAA+_ATPase,tigrfam_FtsH	-	no_errors	AFG3L2	HGNC	ENSG00000141385	tier1	-	-	98	0	0.00	58	4	6.45
AFTPH	0	genome.wustl.edu	37	2	64796270	64796270	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	64796270	64796270	C	T	SNP	AFTPH	ENST00000422803	human	ensembl	74_37	+1	known	missense	c.2132	p.A711V	1.000	NULL	NULL	-	no_errors	AFTPH	HGNC	ENSG00000119844	tier1	-	-	62	0	0.00	42	4	8.70
AGBL5	0	genome.wustl.edu	37	2	27276797	27276797	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	27276797	27276797	C	A	SNP	AGBL5	ENST00000360131	human	ensembl	74_37	+1	known	missense	c.421	p.H141N	1.000	NULL	pfam_Peptidase_M14	-	no_errors	AGBL5	HGNC	ENSG00000084693	tier1	-	-	58	0	0.00	43	21	32.81
ALG10	0	genome.wustl.edu	37	12	34175557	34175558	+	Frame_Shift_Ins	INS	-	-	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	12	34175557	34175558	-	T	INS	ALG10	ENST00000266483	human	ensembl	74_37	+1	known	frame_shift_ins	c.23_24	p.S10fs	0.993:0.983	pirsf_Alg10	pfam_Alg10,pirsf_Alg10	-	no_errors	ALG10	HGNC	ENSG00000139133	tier1			104	0	0.00	68	19	21.84
ALMS1	0	genome.wustl.edu	37	2	73718079	73718079	+	Missense_Mutation	SNP	A	A	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	73718079	73718079	A	C	SNP	ALMS1	ENST00000264448	human	ensembl	74_37	+1	known	missense	c.8990	p.N2997T	0.719	NULL	NULL	-	no_errors	ALMS1	HGNC	ENSG00000116127	tier1	-	-	36	0	0.00	25	8	24.24
ALS2CR11	0	genome.wustl.edu	37	2	202469371	202469371	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	202469371	202469371	G	T	SNP	ALS2CR11	ENST00000286195	human	ensembl	74_37	-1	known	missense	c.281	p.T94K	0.000	NULL	superfamily_C2_dom	-	no_errors	ALS2CR11	HGNC	ENSG00000155754	tier1	-	-	72	0	0.00	52	4	7.14
ARHGAP12	0	genome.wustl.edu	37	10	32096465	32096466	+	RNA	INS	-	-	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	10	32096465	32096466	-	A	INS	ARHGAP12	ENST00000492028	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.992:0.771	-	-	-	no_errors	ARHGAP12	HGNC	ENSG00000165322	tier1			43	0	0.00	42	3	6.67
ARMC9	0	genome.wustl.edu	37	2	232081450	232081450	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	232081450	232081450	G	T	SNP	ARMC9	ENST00000349938	human	ensembl	74_37	+1	known	missense	c.448	p.A150S	1.000	NULL	superfamily_ARM-type_fold,smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	ARMC9	HGNC	ENSG00000135931				63	0	0.00	67	4	5.63
ASB17	0	genome.wustl.edu	37	1	76397722	76397722	+	Silent	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	76397722	76397722	A	G	SNP	ASB17	ENST00000284142	human	ensembl	74_37	-1	known	silent	c.255	p.F85	1.000	superfamily_Ankyrin_rpt-contain_dom	pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_SOCS_C,pfscan_SOCS_C	-	no_errors	ASB17	HGNC	ENSG00000154007	tier1	-	-	55	0	0.00	38	20	34.48
ASB17	0	genome.wustl.edu	37	1	76397637	76397637	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	76397637	76397637	G	A	SNP	ASB17	ENST00000284142	human	ensembl	74_37	-1	known	missense	c.340	p.L114F	1.000	superfamily_Ankyrin_rpt-contain_dom	pfam_SOCS_C,superfamily_Ankyrin_rpt-contain_dom,smart_SOCS_C,pfscan_SOCS_C	-	no_errors	ASB17	HGNC	ENSG00000154007				38	0	0.00	31	2	6.06
ATRNL1	0	genome.wustl.edu	37	10	116975491	116975491	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	10	116975491	116975491	C	T	SNP	ATRNL1	ENST00000355044	human	ensembl	74_37	+1	known	missense	c.1385	p.A462V	1.000	NULL	pfam_Kelch_1,pfam_Kelch_2,pfam_Plexin_repeat,pfam_CUB_dom,pfam_EGF_extracell,superfamily_C-type_lectin_fold,superfamily_CUB_dom,superfamily_Plexin-like_fold,smart_EG-like_dom,smart_CUB_dom,smart_Plexin-like_fold,smart_C-type_lectin,smart_EGF_laminin,pfscan_CUB_dom,pfscan_EG-like_dom,pfscan_EGF_laminin,pfscan_C-type_lectin	-	no_errors	ATRNL1	HGNC	ENSG00000107518	tier1	-	-	47	0	0.00	39	4	9.09
BARX2	0	genome.wustl.edu	37	11	129312648	129312648	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	11	129312648	129312648	G	T	SNP	BARX2	ENST00000531946	human	ensembl	74_37	+1	putative	missense	c.41	p.C14F	0.000	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_HTH_motif	-	no_errors	BARX2	HGNC	ENSG00000043039	tier1	-	-	40	0	0.00	14	18	56.25
BEND2	0	genome.wustl.edu	37	X	18221727	18221727	+	Silent	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	X	18221727	18221727	G	T	SNP	BEND2	ENST00000380033	human	ensembl	74_37	-1	known	silent	c.801	p.S267	0.000	NULL	pfam_BEN_domain	-	no_errors	BEND2	HGNC	ENSG00000177324	tier1	-	-	67	0	0.00	44	4	8.33
BMP2K	0	genome.wustl.edu	37	4	79792166	79792166	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	4	79792166	79792166	C	G	SNP	BMP2K	ENST00000335016	human	ensembl	74_37	+1	known	missense	c.1461	p.H487Q	0.883	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	BMP2K	HGNC	ENSG00000138756	tier1	rs200441916	-	61	0	0.00	51	5	8.77
BSG	0	genome.wustl.edu	37	19	581392	581392	+	Silent	SNP	G	G	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	581392	581392	G	C	SNP	BSG	ENST00000333511	human	ensembl	74_37	+1	known	silent	c.870	p.L290	0.988	pfam_Ig_I-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	BSG	HGNC	ENSG00000172270	tier1	-	-	75	0	0.00	60	5	7.69
BTAF1	0	genome.wustl.edu	37	10	93719887	93719887	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	10	93719887	93719887	A	G	SNP	BTAF1	ENST00000265990	human	ensembl	74_37	+1	known	missense	c.1239	p.I413M	1.000	superfamily_ARM-type_fold	pfam_DUF3535,pfam_SNF2_N,pfam_HEAT,pfam_Helicase_C,superfamily_ARM-type_fold,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	BTAF1	HGNC	ENSG00000095564	tier1	-	-	41	0	0.00	23	15	39.47
C10orf76	0	genome.wustl.edu	37	10	103771512	103771512	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	10	103771512	103771512	G	T	SNP	C10orf76	ENST00000370033	human	ensembl	74_37	-1	known	missense	c.799	p.Q267K	1.000	superfamily_ARM-type_fold	pfam_DUF1741,superfamily_ARM-type_fold	-	no_errors	C10orf76	HGNC	ENSG00000120029				36	0	0.00	28	2	6.67
C11orf82	0	genome.wustl.edu	37	11	82643985	82643985	+	Silent	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	11	82643985	82643985	G	T	SNP	C11orf82	ENST00000430323	human	ensembl	74_37	+1	known	silent	c.1605	p.P535	0.001	NULL	pfam_Rep_factor-A_C,superfamily_NA-bd_OB-fold	-	no_errors	C11orf82	HGNC	ENSG00000165490				38	0	0.00	34	2	5.56
C20orf26	0	genome.wustl.edu	37	20	20258012	20258012	+	Silent	SNP	C	C	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	20	20258012	20258012	C	A	SNP	C20orf26	ENST00000245957	human	ensembl	74_37	+1	known	silent	c.2706	p.I902	0.152	NULL	superfamily_Acyl_CoA_acyltransferase	-	no_errors	C20orf26	HGNC	ENSG00000089101	tier1	-	-	38	0	0.00	30	15	33.33
CARF	0	genome.wustl.edu	37	2	203848307	203848308	+	Frame_Shift_Ins	INS	-	-	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	203848307	203848308	-	A	INS	CARF	ENST00000320443	human	ensembl	74_37	+1	known	frame_shift_ins	c.2138_2139	p.T716fs	0.949:0.979	NULL	NULL	-	no_errors	CARF	HGNC	ENSG00000138380	tier1			72	0	0.00	53	8	13.11
CCDC171	0	genome.wustl.edu	37	9	15578911	15578911	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	9	15578911	15578911	G	T	SNP	CCDC171	ENST00000380701	human	ensembl	74_37	+1	known	missense	c.242	p.R81L	1.000	NULL	superfamily_STAT_TF_coiled-coil	-	no_errors	CCDC171	HGNC	ENSG00000164989				36	0	0.00	56	3	5.08
CDC20	0	genome.wustl.edu	37	1	43825769	43825770	+	Splice_Site	INS	-	-	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	43825769	43825770	-	T	INS	CDC20	ENST00000310955	human	ensembl	74_37	+1	known	splice_site_ins	c.556+1_556+1	e4+1	1.000:1.000	-	-	-	no_errors	CDC20	HGNC	ENSG00000117399	tier1			42	0	0.00	23	7	23.33
CDH16	0	genome.wustl.edu	37	16	66944394	66944394	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	16	66944394	66944394	G	T	SNP	CDH16	ENST00000299752	human	ensembl	74_37	-1	known	missense	c.1936	p.L646M	0.131	superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	CDH16	HGNC	ENSG00000166589	tier1	-	-	66	0	0.00	40	4	9.09
CDK5RAP2	0	genome.wustl.edu	37	9	123173662	123173662	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	9	123173662	123173662	T	C	SNP	CDK5RAP2	ENST00000349780	human	ensembl	74_37	-1	known	missense	c.4388	p.N1463S	0.970	NULL	pfam_Spindle_assoc	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861	tier1	-	-	43	0	0.00	12	28	70.00
CHODL	0	genome.wustl.edu	37	21	19635169	19635169	+	Silent	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	21	19635169	19635169	G	A	SNP	CHODL	ENST00000299295	human	ensembl	74_37	+1	known	silent	c.696	p.L232	1.000	NULL	pfam_C-type_lectin,superfamily_C-type_lectin_fold,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	CHODL	HGNC	ENSG00000154645	tier1	-	-	67	0	0.00	50	13	20.63
CLVS2	0	genome.wustl.edu	37	6	123376961	123376961	+	Missense_Mutation	SNP	A	A	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	6	123376961	123376961	A	C	SNP	CLVS2	ENST00000275162	human	ensembl	74_37	+1	known	missense	c.686	p.H229P	1.000	pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,prints_CRAL-bd_toc_tran	pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,prints_CRAL-bd_toc_tran	-	no_errors	CLVS2	HGNC	ENSG00000146352	tier1	-	-	37	0	0.00	19	6	24.00
COL11A2	0	genome.wustl.edu	37	6	33147260	33147260	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	6	33147260	33147260	G	A	SNP	COL11A2	ENST00000341947	human	ensembl	74_37	-1	known	missense	c.1451	p.A484V	0.998	NULL	pfam_Collagen,pfam_Fib_collagen_C,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Laminin_G,smart_Fib_collagen_C	-	no_errors	COL11A2	HGNC	ENSG00000204248	tier1	rs143965711	-	74	0	0.00	59	15	20.27
COL22A1	0	genome.wustl.edu	37	8	139768056	139768056	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	8	139768056	139768056	G	T	SNP	COL22A1	ENST00000303045	human	ensembl	74_37	-1	known	missense	c.1919	p.A640E	0.027	NULL	pfam_Collagen,pfam_VWF_A,superfamily_ConA-like_lec_gl_sf,smart_VWF_A,smart_Laminin_G,pfscan_VWF_A	-	no_errors	COL22A1	HGNC	ENSG00000169436				32	0	0.00	33	2	5.71
COL6A3	0	genome.wustl.edu	37	2	238259828	238259828	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	238259828	238259828	C	T	SNP	COL6A3	ENST00000295550	human	ensembl	74_37	-1	known	missense	c.6761	p.G2254E	0.935	NULL	pfam_VWF_A,pfam_Collagen,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,superfamily_Fibronectin_type3,smart_VWF_A,smart_Prot_inh_Kunz-m,pfscan_Fibronectin_type3,pfscan_VWF_A,pfscan_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m	-	no_errors	COL6A3	HGNC	ENSG00000163359	tier1	-	-	47	0	0.00	25	17	40.48
COL9A1	0	genome.wustl.edu	37	6	70992691	70992691	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	6	70992691	70992691	G	A	SNP	COL9A1	ENST00000320755	human	ensembl	74_37	-1	known	missense	c.65	p.A22V	0.019	NULL	pfam_Collagen	-	no_errors	COL9A1	HGNC	ENSG00000112280				68	0	0.00	73	5	6.41
CPT1B	0	genome.wustl.edu	37	22	51015018	51015018	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	22	51015018	51015018	G	T	SNP	CPT1B	ENST00000312108	human	ensembl	74_37	-1	known	missense	c.508	p.Q170K	1.000	NULL	pfam_Carn_acyl_trans	-	no_errors	CPT1B	HGNC	ENSG00000205560	tier1	-	-	38	0	0.00	30	4	11.76
CTBS	0	genome.wustl.edu	37	1	85040024	85040024	+	Silent	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	85040024	85040024	C	T	SNP	CTBS	ENST00000370630	human	ensembl	74_37	-1	known	silent	c.75	p.L25	0.006	NULL	pfam_Glyco_hydro18cat,superfamily_Glycoside_hydrolase_SF,smart_Chitinase_II	-	no_errors	CTBS	HGNC	ENSG00000117151				14	0	0.00	9	2	18.18
CTNNB1	0	genome.wustl.edu	37	3	41278166	41278166	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	3	41278166	41278166	C	T	SNP	CTNNB1	ENST00000349496	human	ensembl	74_37	+1	known	missense	c.2042	p.S681F	1.000	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,prints_Beta-catenin	-	no_errors	CTNNB1	HGNC	ENSG00000168036	tier1	-	-	38	0	0.00	23	10	30.30
CWC22	0	genome.wustl.edu	37	2	180843003	180843003	+	Silent	SNP	T	T	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	180843003	180843003	T	A	SNP	CWC22	ENST00000295749	human	ensembl	74_37	-1	known	silent	c.495	p.S165	1.000	pfam_MIF4G-like_typ-3,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3	pfam_MIF4G-like_typ-3,pfam_Initiation_fac_eIF4g_MI,superfamily_ARM-type_fold,smart_MIF4G-like_typ-3,smart_Initiation_fac_eIF4g_MI	-	no_errors	CWC22	HGNC	ENSG00000163510	tier1	-	-	124	0	0.00	96	21	17.95
CYP4F12	0	genome.wustl.edu	37	19	15795665	15795665	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	15795665	15795665	G	T	SNP	CYP4F12	ENST00000324632	human	ensembl	74_37	+1	known	missense	c.958	p.A320S	0.994	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV	pfam_Cyt_P450,superfamily_Cyt_P450,prints_Cyt_P450_E_grp-I,prints_Cyt_P450_E_grp-IV,prints_Cyt_P450,prints_Cyt_P450_E_grp-II	-	no_errors	CYP4F12	HGNC	ENSG00000186204	tier1	-	-	52	0	0.00	48	4	7.69
DCAKD	0	genome.wustl.edu	37	17	43101979	43101979	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	17	43101979	43101979	C	T	SNP	DCAKD	ENST00000342350	human	ensembl	74_37	-1	known	missense	c.518	p.R173H	0.512	pfam_Depp_CoAkinase,superfamily_P-loop_NTPase,tigrfam_Depp_CoAkinase	pfam_Depp_CoAkinase,superfamily_P-loop_NTPase,tigrfam_Depp_CoAkinase	-	no_errors	DCAKD	HGNC	ENSG00000172992				92	0	0.00	68	4	5.56
DDB1	0	genome.wustl.edu	37	11	61091537	61091537	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	11	61091537	61091537	G	A	SNP	DDB1	ENST00000301764	human	ensembl	74_37	-1	known	missense	c.835	p.R279W	0.996	NULL	pfam_Cleavage/polyA-sp_fac_asu_C	-	no_errors	DDB1	HGNC	ENSG00000167986	tier1	-	-	30	0	0.00	29	9	23.68
DDX1	0	genome.wustl.edu	37	2	15768942	15768942	+	Silent	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	15768942	15768942	G	T	SNP	DDX1	ENST00000233084	human	ensembl	74_37	+1	known	silent	c.1854	p.L618	1.000	superfamily_P-loop_NTPase,pfscan_Helicase_C	pfam_DNA/RNA_helicase_DEAD/DEAH_N,pfam_SPRY_rcpt,pfam_Helicase_C,superfamily_P-loop_NTPase,superfamily_ConA-like_lec_gl_sf,smart_Helicase_ATP-bd,smart_SPla/RYanodine_receptor_subgr,smart_Helicase_C,pfscan_B30.2/SPRY,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_RNA_helicase_DEAD_Q_motif	-	no_errors	DDX1	HGNC	ENSG00000079785				23	0	0.00	29	4	12.12
DIS3L2	0	genome.wustl.edu	37	2	233198624	233198624	+	Silent	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	233198624	233198624	G	T	SNP	DIS3L2	ENST00000325385	human	ensembl	74_37	+1	known	silent	c.2085	p.L695	1.000	NULL	NULL	-	no_errors	DIS3L2	HGNC	ENSG00000144535	tier1	-	-	74	0	0.00	66	4	5.71
DMXL2	0	genome.wustl.edu	37	15	51773127	51773127	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	15	51773127	51773127	G	T	SNP	DMXL2	ENST00000543779	human	ensembl	74_37	-1	known	missense	c.6176	p.A2059D	1.000	NULL	pfam_Rav1p_C,pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DMXL2	HGNC	ENSG00000104093	tier1	-	-	43	0	0.00	25	13	34.21
DNAJB1	0	genome.wustl.edu	37	19	14627668	14627668	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	14627668	14627668	G	T	SNP	DNAJB1	ENST00000254322	human	ensembl	74_37	-1	known	missense	c.402	p.F134L	1.000	NULL	pfam_DnaJ_C,pfam_DnaJ_domain,superfamily_DnaJ_domain,superfamily_HSP40/DnaJ_pept-bd,smart_DnaJ_domain,pfscan_DnaJ_domain,prints_DnaJ_domain	-	no_errors	DNAJB1	HGNC	ENSG00000132002	tier1	-	-	44	0	0.00	52	4	7.14
DNM1P47	0	genome.wustl.edu	37	15	102304638	102304638	+	RNA	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	15	102304638	102304638	C	T	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.994	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660				12	0	0.00	11	5	31.25
DPY19L3	0	genome.wustl.edu	37	19	32968498	32968498	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	32968498	32968498	G	T	SNP	DPY19L3	ENST00000342179	human	ensembl	74_37	+1	known	nonsense	c.1768	p.G590*	1.000	pfam_Dpy-19	pfam_Dpy-19	-	no_errors	DPY19L3	HGNC	ENSG00000178904	tier1	-	-	62	0	0.00	52	4	7.14
DST	0	genome.wustl.edu	37	6	56489969	56489969	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	6	56489969	56489969	G	C	SNP	DST	ENST00000370754	human	ensembl	74_37	-1	known	missense	c.4717	p.L1573V	0.441	superfamily_ABC1_TM_dom,smart_Spectrin/alpha-actinin	pfam_Spectrin_repeat,pfam_Plectin_repeat,pfam_CH-domain,pfam_GAS2_dom,pfam_CAMSAP_CH,superfamily_CH-domain,superfamily_GAS2_dom,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Plectin_repeat,smart_EF_hand_dom,smart_GAS2_dom,pfscan_CH-domain,pfscan_EF_hand_dom	-	no_errors	DST	HGNC	ENSG00000151914	tier1	-	-	96	0	0.00	73	17	18.89
DUSP10	0	genome.wustl.edu	37	1	221875156	221875157	+	RNA	INS	-	-	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	221875156	221875157	-	A	INS	DUSP10	ENST00000468085	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.002:0.000	-	-	-	no_errors	DUSP10	HGNC	ENSG00000143507	tier1			12	0	0.00	20	4	16.67
ENSG00000221744	0	genome.wustl.edu	37	9	20295035	20295036	+	RNA	DEL	TA	TA	-			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	TA	TA					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	9	20295035	20295036	TA	0	DEL	ENSG00000221744	ENST00000408817	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000:0.009	-	-	-	no_errors	AL512635.1	Clone_based_ensembl_gene	ENSG00000221744				11	0	0.00	11	3	21.43
ENSG00000225411	0	genome.wustl.edu	37	9	68400525	68400525	+	RNA	SNP	C	C	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	9	68400525	68400525	C	A	SNP	ENSG00000225411	ENST00000417843	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.106	-	-	-	no_errors	RP11-764K9.1	Clone_based_vega_gene	ENSG00000225411	tier1	rs79614538	-	14	0	0.00	15	7	31.82
EPB41L2	0	genome.wustl.edu	37	6	131186736	131186736	+	Silent	SNP	C	C	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	6	131186736	131186736	C	G	SNP	EPB41L2	ENST00000337057	human	ensembl	74_37	-1	known	silent	c.2769	p.L923	1.000	pirsf_Band_41_protein,pfam_Band_4.1_C	pirsf_Band_41_protein,pfam_Band_4.1_C,pfam_SAB_dom,pfam_FERM_N,pfam_FERM_PH-like_C,pfam_FERM_central,pfam_FERM-adjacent,superfamily_FERM_central,smart_Band_41_domain,prints_Band_41_fam,prints_Ez/rad/moesin_like,pfscan_FERM_domain	-	no_errors	EPB41L2	HGNC	ENSG00000079819	tier1	-	-	70	0	0.00	51	28	35.44
EPHA6	0	genome.wustl.edu	37	3	97356914	97356914	+	Silent	SNP	T	T	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	3	97356914	97356914	T	G	SNP	EPHA6	ENST00000389672	human	ensembl	74_37	+1	known	silent	c.2772	p.A924	0.994	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ephrin_rcpt_lig-bd_dom,pfam_Prot_kinase_dom,pfam_Fibronectin_type3,pfam_SAM_type1,pfam_SAM_2,superfamily_Galactose-bd-like,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_SAM/pointed,superfamily_Growth_fac_rcpt_N_dom,smart_Ephrin_rcpt_lig-bd_dom,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_SAM,pfscan_Fibronectin_type3,pfscan_SAM,pfscan_Prot_kinase_dom,prints_Ser-Thr/Tyr_kinase_cat_dom	-	no_errors	EPHA6	HGNC	ENSG00000080224	tier1	-	-	45	0	0.00	27	12	30.77
EVC	0	genome.wustl.edu	37	4	5800490	5800490	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	4	5800490	5800490	A	T	SNP	EVC	ENST00000264956	human	ensembl	74_37	+1	known	missense	c.2275	p.S759C	0.504	NULL	NULL	-	no_errors	EVC	HGNC	ENSG00000072840	tier1	-	-	63	0	0.00	24	15	38.46
EVL	0	genome.wustl.edu	37	14	100594903	100594903	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	14	100594903	100594903	G	A	SNP	EVL	ENST00000392920	human	ensembl	74_37	+1	known	missense	c.535	p.V179I	0.586	pirsf_Vasodilator_phosphoprotein	pfam_WH1/EVH1,pfam_VASP_tetra,smart_WH1/EVH1,pirsf_Vasodilator_phosphoprotein,pfscan_WH1/EVH1	-	no_errors	EVL	HGNC	ENSG00000196405	tier1	-	-	104	0	0.00	53	5	8.62
F2RL1	0	genome.wustl.edu	37	5	76129237	76129237	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	5	76129237	76129237	C	G	SNP	F2RL1	ENST00000296677	human	ensembl	74_37	+1	known	missense	c.805	p.L269V	0.950	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_serpentine_rcpt_Srw,prints_Pro_rcpt_2,prints_Protea_act_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	F2RL1	HGNC	ENSG00000164251	tier1	-	-	61	0	0.00	27	3	10.00
FAM135B	0	genome.wustl.edu	37	8	139144986	139144986	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	8	139144986	139144986	C	A	SNP	FAM135B	ENST00000395297	human	ensembl	74_37	-1	known	missense	c.4071	p.K1357N	1.000	NULL	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like	-	no_errors	FAM135B	HGNC	ENSG00000147724				32	0	0.00	28	3	9.68
FAM135B	0	genome.wustl.edu	37	8	139165152	139165152	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	8	139165152	139165152	T	A	SNP	FAM135B	ENST00000395297	human	ensembl	74_37	-1	known	missense	c.1566	p.Q522H	0.000	NULL	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like	-	no_errors	FAM135B	HGNC	ENSG00000147724				43	0	0.00	37	2	5.13
FAM135B	0	genome.wustl.edu	37	8	139380163	139380163	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	8	139380163	139380163	G	T	SNP	FAM135B	ENST00000395297	human	ensembl	74_37	-1	known	missense	c.64	p.L22I	1.000	NULL	pfam_DUF676_lipase-like,pfam_DUF3657,pfam_PGAP1-like	-	no_errors	FAM135B	HGNC	ENSG00000147724				24	0	0.00	30	4	11.76
FAM194A	0	genome.wustl.edu	37	3	150421519	150421519	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	3	150421519	150421519	A	T	SNP	FAM194A	ENST00000295910	human	ensembl	74_37	-1	known	missense	c.167	p.V56E	0.000	NULL	NULL	-	no_errors	FAM194A	HGNC	ENSG00000163645	tier1	-	-	26	0	0.00	37	5	11.63
FAM214B	0	genome.wustl.edu	37	9	35106621	35106621	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	9	35106621	35106621	G	A	SNP	FAM214B	ENST00000322813	human	ensembl	74_37	-1	known	missense	c.973	p.R325W	1.000	NULL	NULL	-	no_errors	FAM214B	HGNC	ENSG00000005238	tier1	-	-	82	0	0.00	37	30	44.78
FAM220A	0	genome.wustl.edu	37	7	6370735	6370735	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	7	6370735	6370735	C	A	SNP	FAM220A	ENST00000313324	human	ensembl	74_37	-1	known	missense	c.51	p.Q17H	0.000	NULL	NULL	-	no_errors	FAM220A	HGNC	ENSG00000178397	tier1	-	-	54	0	0.00	25	7	21.88
FANCA	0	genome.wustl.edu	37	16	89877149	89877149	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	16	89877149	89877149	C	T	SNP	FANCA	ENST00000389301	human	ensembl	74_37	-1	known	missense	c.488	p.R163H	0.946	NULL	pfam_Fanconia,prints_Fanconia	-	no_errors	FANCA	HGNC	ENSG00000187741				48	0	0.00	39	3	7.14
FBXL13	0	genome.wustl.edu	37	7	102462523	102462523	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	7	102462523	102462523	C	T	SNP	FBXL13	ENST00000313221	human	ensembl	74_37	-1	known	missense	c.1982	p.R661Q	1.000	smart_Leu-rich_rpt_Cys-con_subtyp	smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_F-box_dom	-	no_errors	FBXL13	HGNC	ENSG00000161040				69	0	0.00	84	5	5.62
FETUB	0	genome.wustl.edu	37	3	186364101	186364101	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	3	186364101	186364101	A	G	SNP	FETUB	ENST00000265029	human	ensembl	74_37	+1	known	missense	c.659	p.Q220R	0.005	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	pfam_Prot_inh_cystat,smart_Prot_inh_cystat	-	no_errors	FETUB	HGNC	ENSG00000090512				55	0	0.00	75	4	5.06
FLNC	0	genome.wustl.edu	37	7	128486412	128486412	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	7	128486412	128486412	G	T	SNP	FLNC	ENST00000325888	human	ensembl	74_37	+1	known	missense	c.4022	p.R1341L	1.000	pfam_Filamin/ABP280_repeat-like,superfamily_Ig_E-set,smart_Filamin,pfscan_Filamin/ABP280_repeat-like	pfam_Filamin/ABP280_repeat-like,pfam_CH-domain,superfamily_CH-domain,superfamily_Ig_E-set,smart_CH-domain,smart_Filamin,pfscan_CH-domain,pfscan_Filamin/ABP280_repeat-like	-	no_errors	FLNC	HGNC	ENSG00000128591				23	0	0.00	19	2	9.52
FMN1	0	genome.wustl.edu	37	15	33261259	33261259	+	Silent	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	15	33261259	33261259	G	A	SNP	FMN1	ENST00000334528	human	ensembl	74_37	-1	known	silent	c.1974	p.L658	0.000	NULL	pfam_FH2_Formin,smart_FH2_Formin,prints_Formin_Cappuccino_subfam	-	no_errors	FMN1	HGNC	ENSG00000248905				27	0	0.00	45	4	8.16
FOLH1	0	genome.wustl.edu	37	11	49175427	49175427	+	Silent	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	11	49175427	49175427	A	G	SNP	FOLH1	ENST00000256999	human	ensembl	74_37	-1	known	silent	c.1941	p.S647	0.000	pfam_TFR-like_dimer_dom,superfamily_TFR-like_dimer_dom	pfam_TFR-like_dimer_dom,pfam_Protease-assoc_domain,pfam_Peptidase_M28,superfamily_TFR-like_dimer_dom	-	no_errors	FOLH1	HGNC	ENSG00000086205				42	0	0.00	26	3	10.34
FREM1	0	genome.wustl.edu	37	9	14806713	14806713	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	9	14806713	14806713	C	T	SNP	FREM1	ENST00000380881	human	ensembl	74_37	-1	known	missense	c.3223	p.E1075K	1.000	NULL	pfam_C-type_lectin,pfam_Calx_beta,superfamily_C-type_lectin_fold,superfamily_Cadherin-like,smart_C-type_lectin,pfscan_C-type_lectin	-	no_errors	FREM1	HGNC	ENSG00000164946	tier1	-	-	49	0	0.00	44	4	8.33
FXR1	0	genome.wustl.edu	37	3	180652996	180652996	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	3	180652996	180652996	A	G	SNP	FXR1	ENST00000357559	human	ensembl	74_37	+1	known	missense	c.175	p.I59V	1.000	pfam_Agenet-like_dom,superfamily_NA-bd_OB-fold	pfam_Frag_X_MRP_fam,pfam_KH_dom_type_1,pfam_Agenet-like_dom,superfamily_NA-bd_OB-fold,smart_KH_dom,pfscan_KH_dom_type_1	-	no_errors	FXR1	HGNC	ENSG00000114416	tier1	-	-	94	0	0.00	69	48	41.03
GEMIN4	0	genome.wustl.edu	37	17	650493	650493	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	17	650493	650493	C	T	SNP	GEMIN4	ENST00000319004	human	ensembl	74_37	-1	known	missense	c.790	p.V264M	0.000	NULL	NULL	-	no_errors	GEMIN4	HGNC	ENSG00000179409				38	0	0.00	34	2	5.56
GPAM	0	genome.wustl.edu	37	10	113913356	113913356	+	Silent	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	10	113913356	113913356	G	A	SNP	GPAM	ENST00000348367	human	ensembl	74_37	-1	known	silent	c.2439	p.C813	0.999	NULL	pfam_Plipid/glycerol_acylTrfase,smart_Plipid/glycerol_acylTrfase	-	no_errors	GPAM	HGNC	ENSG00000119927	tier1	-	-	21	0	0.00	13	3	18.75
GPR124	0	genome.wustl.edu	37	8	37688970	37688970	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	8	37688970	37688970	G	T	SNP	GPR124	ENST00000412232	human	ensembl	74_37	+1	known	missense	c.962	p.W321L	1.000	smart_Ig_sub,pfscan_Ig-like_dom	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_GPCR_2_extracellular_dom,pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom	-	no_errors	GPR124	HGNC	ENSG00000020181				61	0	0.00	28	3	9.68
GPR125	0	genome.wustl.edu	37	4	22390753	22390753	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	4	22390753	22390753	G	T	SNP	GPR125	ENST00000334304	human	ensembl	74_37	-1	known	missense	c.2681	p.A894E	1.000	pfam_GPCR_2_secretin-like,pfscan_GPCR_2-like	pfam_GPCR_2_secretin-like,pfam_GPS_dom,pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_GPCR_2_extracellular_dom,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_GPS_dom,pfscan_GPS_dom,pfscan_GPCR_2_extracellular_dom,pfscan_GPCR_2-like,pfscan_Ig-like_dom	-	no_errors	GPR125	HGNC	ENSG00000152990	tier1	-	-	30	0	0.00	17	3	15.00
GPR156	0	genome.wustl.edu	37	3	119886565	119886565	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	3	119886565	119886565	G	A	SNP	GPR156	ENST00000315843	human	ensembl	74_37	-1	known	missense	c.1759	p.P587S	0.000	NULL	pfam_GPCR_3_C,pfscan_GPCR_3_C,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GPR156	HGNC	ENSG00000175697	tier1	-	-	78	0	0.00	90	5	5.26
GPR158	0	genome.wustl.edu	37	10	25889362	25889363	+	RNA	INS	-	-	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	10	25889362	25889363	-	A	INS	GPR158	ENST00000490549	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.627:0.417	-	-	-	no_errors	GPR158	HGNC	ENSG00000151025	tier1			9	0	0.00	3	2	40.00
GPR161	0	genome.wustl.edu	37	1	168066118	168066118	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	168066118	168066118	T	C	SNP	GPR161	ENST00000537209	human	ensembl	74_37	-1	known	missense	c.787	p.S263G	1.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	GPR161	HGNC	ENSG00000143147	tier1	-	-	26	0	0.00	24	4	14.29
GRM3	0	genome.wustl.edu	37	7	86394858	86394858	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	7	86394858	86394858	G	T	SNP	GRM3	ENST00000361669	human	ensembl	74_37	+1	known	missense	c.397	p.A133S	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I,prints_GPCR_3_mtglu_rcpt_3	pfam_ANF_lig-bd_rcpt,pfam_GPCR_3_C,pfam_GPCR_3_9-Cys_dom,superfamily_Peripla_BP_I,pfscan_GPCR_3_C,prints_GPCR_3,prints_GPCR_3_mtglu_rcpt_3,prints_GPCR_3_mtglu_rcpt,prints_GPCR_3_mtglu_rcpt_2,prints_GPCR_3_GABA_rcpt_B	-	no_errors	GRM3	HGNC	ENSG00000198822	tier1	-	-	39	0	0.00	30	4	11.76
HEMGN	0	genome.wustl.edu	37	9	100692787	100692787	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	9	100692787	100692787	A	G	SNP	HEMGN	ENST00000259456	human	ensembl	74_37	-1	known	missense	c.890	p.L297P	0.004	NULL	NULL	-	no_errors	HEMGN	HGNC	ENSG00000136929				36	0	0.00	55	3	5.17
HNRNPA1L2	0	genome.wustl.edu	37	13	53217214	53217214	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	13	53217214	53217214	G	A	SNP	HNRNPA1L2	ENST00000342657	human	ensembl	74_37	+1	known	missense	c.587	p.R196Q	0.124	NULL	pfam_RRM_dom,pfam_HnRNPA1,smart_RRM_dom,pfscan_RRM_dom	-	no_errors	HNRNPA1L2	HGNC	ENSG00000139675	tier1	-	-	58	0	0.00	33	4	10.81
HP	0	genome.wustl.edu	37	16	72094632	72094632	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	16	72094632	72094632	C	T	SNP	HP	ENST00000355906	human	ensembl	74_37	+1	known	missense	c.1064	p.A355V	0.998	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,superfamily_Sushi_SCR_CCP,smart_Peptidase_S1,pfscan_Sushi_SCR_CCP,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	HP	HGNC	ENSG00000257017	tier1	-	-	80	0	0.00	62	19	23.46
HP1BP3	0	genome.wustl.edu	37	1	21076484	21076484	+	RNA	SNP	T	T	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	21076484	21076484	T	C	SNP	HP1BP3	ENST00000491748	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	HP1BP3	HGNC	ENSG00000127483	tier1	-	-	13	0	0.00	6	4	40.00
HRH2	0	genome.wustl.edu	37	5	175110302	175110302	+	Silent	SNP	C	C	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	5	175110302	175110302	C	A	SNP	HRH2	ENST00000377291	human	ensembl	74_37	+1	known	silent	c.66	p.T22	0.000	prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Histamine_H2_rcpt,prints_GPCR_Rhodpsn,prints_5HT6_rcpt	-	no_errors	HRH2	HGNC	ENSG00000113749				83	0	0.00	57	3	5.00
IKZF3	0	genome.wustl.edu	37	17	37922218	37922218	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	17	37922218	37922218	T	C	SNP	IKZF3	ENST00000346872	human	ensembl	74_37	-1	known	missense	c.1355	p.Y452C	1.000	smart_Znf_C2H2-like	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	IKZF3	HGNC	ENSG00000161405	tier1	-	-	36	0	0.00	32	20	38.46
IL21R	0	genome.wustl.edu	37	16	27460100	27460100	+	Silent	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	16	27460100	27460100	C	T	SNP	IL21R	ENST00000337929	human	ensembl	74_37	+1	known	silent	c.1113	p.Y371	0.010	NULL	superfamily_Fibronectin_type3	-	no_errors	IL21R	HGNC	ENSG00000103522				26	0	0.00	26	2	7.14
IL4R	0	genome.wustl.edu	37	16	27373610	27373610	+	Missense_Mutation	SNP	T	T	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	16	27373610	27373610	T	G	SNP	IL4R	ENST00000170630	human	ensembl	74_37	+1	known	missense	c.937	p.F313V	0.934	NULL	pfam_IL-4_rcpt-alpha_N,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IL4R	HGNC	ENSG00000077238	tier1	-	-	56	0	0.00	47	25	34.72
IRF2BPL	0	genome.wustl.edu	37	14	77492226	77492226	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	14	77492226	77492226	G	A	SNP	IRF2BPL	ENST00000238647	human	ensembl	74_37	-1	known	missense	c.1910	p.A637V	0.996	pfam_Interferon_reg_fac2-bd1_2_Znf	pfam_Interferon_reg_fac2-bd1_2_Znf	-	no_errors	IRF2BPL	HGNC	ENSG00000119669	tier1	-	-	44	0	0.00	35	4	10.26
ITGA5	0	genome.wustl.edu	37	12	54795803	54795803	+	Silent	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	12	54795803	54795803	G	A	SNP	ITGA5	ENST00000293379	human	ensembl	74_37	-1	known	silent	c.2208	p.P736	1.000	pfam_Integrin_alpha-2	pfam_Integrin_alpha-2,pfam_FG-GAP,smart_Int_alpha_beta-p,prints_Integrin_alpha	-	no_errors	ITGA5	HGNC	ENSG00000161638	tier1	-	-	37	0	0.00	37	9	19.57
ITGB1	0	genome.wustl.edu	37	10	33209186	33209186	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	10	33209186	33209186	G	A	SNP	ITGB1	ENST00000374956	human	ensembl	74_37	-1	known	missense	c.1256	p.S419F	1.000	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,smart_Integrin_bsu_N	pirsf_Integrin_bsu,pfam_Integrin_bsu_N,pfam_Integrin_bsu_tail,pfam_Integrin_bsu_cyt_dom,pfam_EGF_extracell,superfamily_Integrin_bsu_tail,superfamily_Plexin-like_fold,smart_Plexin-like_fold,smart_Integrin_bsu_N,prints_Integrin_bsu	-	no_errors	ITGB1	HGNC	ENSG00000150093	tier1	-	-	35	0	0.00	17	4	19.05
KCNA7	0	genome.wustl.edu	37	19	49573965	49573965	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	49573965	49573965	C	T	SNP	KCNA7	ENST00000221444	human	ensembl	74_37	-1	known	missense	c.726	p.M242I	1.000	pfam_Ion_trans_dom,prints_K_chnl	pfam_Ion_trans_dom,pfam_T1-type_BTB,pfam_2pore_dom_K_chnl_dom,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,prints_K_chnl,prints_K_chnl_volt-dep_Kv,prints_K_chnl_volt-dep_Kv1	-	no_errors	KCNA7	HGNC	ENSG00000104848	tier1	-	-	54	0	0.00	48	17	26.15
KCNJ8	0	genome.wustl.edu	37	12	21918742	21918742	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	12	21918742	21918742	G	T	SNP	KCNJ8	ENST00000240662	human	ensembl	74_37	-1	known	missense	c.1190	p.S397Y	1.000	pirsf_K_chnl_inward-rec_Kir	pfam_K_chnl_inward-rec_Kir,superfamily_Ig_E-set,pirsf_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir,prints_K_chnl_inward-rec_Kir6.1	-	no_errors	KCNJ8	HGNC	ENSG00000121361				45	0	0.00	31	3	8.82
KCTD9	0	genome.wustl.edu	37	8	25297211	25297211	+	RNA	SNP	C	C	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	8	25297211	25297211	C	A	SNP	KCTD9	ENST00000518067	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	KCTD9	HGNC	ENSG00000104756	tier1	-	-	45	0	0.00	19	13	40.62
KIAA1715	0	genome.wustl.edu	37	2	176804367	176804367	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	176804367	176804367	G	T	SNP	KIAA1715	ENST00000544803	human	ensembl	74_37	-1	known	missense	c.818	p.P273Q	1.000	NULL	pfam_DUF2296	-	no_errors	KIAA1715	HGNC	ENSG00000144320	tier1	-	-	35	0	0.00	22	3	12.00
KIAA1875	0	genome.wustl.edu	37	8	145169799	145169799	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	8	145169799	145169799	G	T	SNP	KIAA1875	ENST00000323662	human	ensembl	74_37	+1	putative	missense	c.4062	p.M1354I	0.000	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	KIAA1875	HGNC	ENSG00000179698	tier1	-	-	74	0	0.00	70	4	5.41
KIF26A	0	genome.wustl.edu	37	14	104639512	104639512	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	14	104639512	104639512	G	A	SNP	KIF26A	ENST00000423312	human	ensembl	74_37	+1	known	missense	c.1619	p.G540D	1.000	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	pfam_Kinesin_motor_dom,superfamily_P-loop_NTPase,smart_Kinesin_motor_dom,prints_Kinesin_motor_dom,pfscan_Kinesin_motor_dom	-	no_errors	KIF26A	HGNC	ENSG00000066735	tier1	-	-	42	0	0.00	36	4	10.00
KIF6	0	genome.wustl.edu	37	6	39693181	39693181	+	RNA	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	6	39693181	39693181	C	T	SNP	KIF6	ENST00000482238	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	KIF6	HGNC	ENSG00000164627	tier1	-	-	29	0	0.00	18	4	18.18
KLF17	0	genome.wustl.edu	37	1	44596234	44596234	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	44596234	44596234	C	T	SNP	KLF17	ENST00000372299	human	ensembl	74_37	+1	known	missense	c.976	p.R326C	1.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	KLF17	HGNC	ENSG00000171872	tier1	-	-	57	0	0.00	41	12	22.64
KLK11	0	genome.wustl.edu	37	19	51525866	51525866	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	51525866	51525866	G	A	SNP	KLK11	ENST00000594768	human	ensembl	74_37	-1	known	missense	c.784	p.P262S	1.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,prints_Peptidase_S1A,pfscan_Peptidase_S1	-	no_errors	KLK11	HGNC	ENSG00000167757	tier1	-	-	27	0	0.00	42	4	8.70
LCA5L	0	genome.wustl.edu	37	21	40783654	40783654	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	21	40783654	40783654	G	T	SNP	LCA5L	ENST00000288350	human	ensembl	74_37	-1	known	missense	c.1050	p.D350E	0.521	NULL	NULL	-	no_errors	LCA5L	HGNC	ENSG00000157578	tier1	-	-	81	0	0.00	64	4	5.88
LGALS9	0	genome.wustl.edu	37	17	25974143	25974143	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	17	25974143	25974143	A	G	SNP	LGALS9	ENST00000395473	human	ensembl	74_37	+1	known	missense	c.757	p.R253G	0.014	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	pfam_Galectin_CRD,superfamily_ConA-like_lec_gl_sf,smart_Galectin_CRD	-	no_errors	LGALS9	HGNC	ENSG00000168961	tier1	-	-	56	0	0.00	54	4	6.78
LOC101927723	0	genome.wustl.edu	37	2	68592603	68592603	+	RNA	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	68592603	68592603	G	A	SNP	LOC101927723	ENST00000366218	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	AC015969.3	Clone_based_vega_gene	ENSG00000203395	tier1	-	-	60	0	0.00	37	5	11.90
LOC730441	0	genome.wustl.edu	37	7	141969660	141969660	+	RNA	SNP	T	T	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	7	141969660	141969660	T	A	SNP	LOC730441	ENST00000334288	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	U66059.29	Clone_based_vega_gene	ENSG00000186163	tier1	-	-	74	0	0.00	60	4	6.25
LRRC41	0	genome.wustl.edu	37	1	46746081	46746081	+	Silent	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	46746081	46746081	C	T	SNP	LRRC41	ENST00000343304	human	ensembl	74_37	-1	known	silent	c.1908	p.L636	0.946	NULL	smart_Leu-rich_rpt_RNase_inh_sub-typ	-	no_errors	LRRC41	HGNC	ENSG00000132128	tier1	-	-	86	0	0.00	60	4	6.25
LRRN3	0	genome.wustl.edu	37	7	110763811	110763811	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	7	110763811	110763811	A	T	SNP	LRRN3	ENST00000308478	human	ensembl	74_37	+1	known	missense	c.983	p.N328I	1.000	NULL	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_LRR-contain_N,superfamily_Fibronectin_type3,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRRN3	HGNC	ENSG00000173114				63	0	0.00	39	3	7.14
LSMEM1	0	genome.wustl.edu	37	7	112126359	112126359	+	RNA	SNP	C	C	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	7	112126359	112126359	C	G	SNP	LSMEM1	ENST00000486022	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	LSMEM1	HGNC	ENSG00000181016	tier1	-	-	27	0	0.00	50	4	7.41
LSMEM1	0	genome.wustl.edu	37	7	112126404	112126404	+	RNA	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	7	112126404	112126404	C	T	SNP	LSMEM1	ENST00000486022	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.002	-	-	-	no_errors	LSMEM1	HGNC	ENSG00000181016	tier1	-	-	52	0	0.00	57	10	14.93
LSMEM1	0	genome.wustl.edu	37	7	112126913	112126913	+	RNA	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	7	112126913	112126913	C	T	SNP	LSMEM1	ENST00000471030	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	LSMEM1	HGNC	ENSG00000181016	tier1	-	-	78	0	0.00	61	10	13.89
MAGEE1	0	genome.wustl.edu	37	X	75648924	75648924	+	Silent	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	X	75648924	75648924	C	T	SNP	MAGEE1	ENST00000361470	human	ensembl	74_37	+1	known	silent	c.601	p.L201	0.020	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEE1	HGNC	ENSG00000198934	tier1	-	-	36	0	0.00	18	3	14.29
MBD2	0	genome.wustl.edu	37	18	51750584	51750585	+	In_Frame_Ins	INS	-	-	GCC			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	18	51750584	51750585	-	GCC	INS	MBD2	ENST00000256429	human	ensembl	74_37	-1	known	in_frame_ins	c.346_345	p.115in_frame_insG	0.957:0.926	NULL	pfam_Methyl_CpG_DNA-bd,superfamily_DNA-bd_dom,smart_Methyl_CpG_DNA-bd,pfscan_Methyl_CpG_DNA-bd	-	no_errors	MBD2	HGNC	ENSG00000134046	tier1			11	0	0.00	2	2	50.00
MIR663A	0	genome.wustl.edu	37	20	26188852	26188852	+	RNA	SNP	C	C	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	20	26188852	26188852	C	A	SNP	MIR663A	ENST00000385250	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	MIR663A	HGNC	ENSG00000227195	tier1	-	-	11	0	0.00	11	6	35.29
MKL1	0	genome.wustl.edu	37	22	40816962	40816962	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	22	40816962	40816962	G	A	SNP	MKL1	ENST00000355630	human	ensembl	74_37	-1	known	missense	c.770	p.S257L	1.000	NULL	pfam_RPEL_repeat,pfam_SAP_dom,smart_RPEL_repeat,smart_SAP_dom,pfscan_RPEL_repeat,pfscan_SAP_dom	-	no_errors	MKL1	HGNC	ENSG00000196588	tier1	-	-	58	0	0.00	75	7	8.54
MT-CO1	0	genome.wustl.edu	37	MT	7003	7003	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	MT	7003	7003	T	C	SNP	MT-CO1	ENST00000361624	human	ensembl	74_37	+1	known	missense	c.1100	p.L367P	NULL	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom	pfam_Cyt_c_Oxase_su1,superfamily_Cyt_c_Oxase_su1_dom,pfscan_Cyt_c_Oxase_su1_dom,prints_Cyt_c_Oxase_su1	-	no_errors	MT-CO1	HGNC	ENSG00000198804	tier1	-	-	44	0	0.00	10	2	16.67
MT-ND5	0	genome.wustl.edu	37	MT	13062	13062	+	Silent	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	MT	13062	13062	A	G	SNP	MT-ND5	ENST00000361567	human	ensembl	74_37	+1	known	silent	c.726	p.P242	NULL	pfam_NADH_UbQ/plastoQ_OxRdtase,tigrfam_NADHpl_OxRdtase_5	pfam_NADH_UbQ/plastoQ_OxRdtase,pfam_NADH_DH_su5_C,pfam_NADH_UbQ_OxRdtase_chain5/L_N,tigrfam_NADHpl_OxRdtase_5	-	no_errors	MT-ND5	HGNC	ENSG00000198786	tier1	rs28670513	-	34	0	0.00	5	2	28.57
MT-RNR2	0	genome.wustl.edu	37	MT	1987	1987	+	RNA	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	MT	1987	1987	G	T	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	+1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-RNR2	HGNC	ENSG00000210082	tier1	-	-	67	0	0.00	15	2	11.76
MT-TQ	0	genome.wustl.edu	37	MT	4357	4357	+	RNA	SNP	T	T	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	MT	4357	4357	T	C	SNP	MT-TQ	ENST00000387372	human	ensembl	74_37	-1	known	rna	NULL	NULL	NULL	-	-	-	no_errors	MT-TQ	HGNC	ENSG00000210107	tier1	-	-	28	0	0.00	5	2	28.57
MUC12	0	genome.wustl.edu	37	7	100645478	100645478	+	Silent	SNP	T	T	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	7	100645478	100645478	T	G	SNP	MUC12	ENST00000536621	human	ensembl	74_37	+1	known	silent	c.11634	p.G3878	0.006	NULL	pfam_SEA_dom	-	no_errors	MUC12	HGNC	ENSG00000205277	tier1	-	-	9	0	0.00	12	9	40.91
MUC16	0	genome.wustl.edu	37	19	9018487	9018487	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	9018487	9018487	G	A	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.37687	p.R12563C	0.000	pfam_SEA_dom	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	130	0	0.00	84	7	7.69
MUC16	0	genome.wustl.edu	37	19	9018524	9018524	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	9018524	9018524	G	T	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.37650	p.F12550L	1.000	pfam_SEA_dom	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	116	0	0.00	85	6	6.59
MYH7	0	genome.wustl.edu	37	14	23900828	23900828	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	14	23900828	23900828	G	A	SNP	MYH7	ENST00000355349	human	ensembl	74_37	-1	known	missense	c.698	p.A233V	1.000	pfam_Myosin_head_motor_dom,superfamily_P-loop_NTPase,smart_Myosin_head_motor_dom,prints_Myosin_head_motor_dom	pfam_Myosin_tail,pfam_Myosin_head_motor_dom,pfam_Myosin_N,superfamily_P-loop_NTPase,superfamily_Prefoldin,smart_Myosin_head_motor_dom,smart_IQ_motif_EF-hand-BS,pfscan_IQ_motif_EF-hand-BS,prints_Myosin_head_motor_dom	-	no_errors	MYH7	HGNC	ENSG00000092054	tier1	-	-	76	0	0.00	56	4	6.67
MYOM2	0	genome.wustl.edu	37	8	2021562	2021562	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	8	2021562	2021562	G	T	SNP	MYOM2	ENST00000262113	human	ensembl	74_37	+1	known	missense	c.1102	p.A368S	1.000	pfam_Ig_I-set,superfamily_Fibronectin_type3,smart_Ig_sub	pfam_Fibronectin_type3,pfam_Ig_I-set,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	MYOM2	HGNC	ENSG00000036448				39	0	0.00	35	2	5.41
NBEA	0	genome.wustl.edu	37	13	36241657	36241657	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	13	36241657	36241657	A	G	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.8548	p.S2850G	1.000	superfamily_WD40_repeat_dom	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915	tier1	-	-	73	0	0.00	63	4	5.97
NOD1	0	genome.wustl.edu	37	7	30477261	30477261	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	7	30477261	30477261	T	A	SNP	NOD1	ENST00000222823	human	ensembl	74_37	-1	known	missense	c.2465	p.N822I	0.980	smart_Leu-rich_rpt_RNase_inh_sub-typ	pfam_CARD,superfamily_DEATH-like_dom,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,pfscan_NACHT_NTPase,pfscan_CARD	-	no_errors	NOD1	HGNC	ENSG00000106100	tier1	-	-	62	0	0.00	29	14	32.56
NPAT	0	genome.wustl.edu	37	11	108044483	108044483	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	11	108044483	108044483	G	A	SNP	NPAT	ENST00000278612	human	ensembl	74_37	-1	known	nonsense	c.1228	p.Q410*	0.015	NULL	smart_LisH_dimerisation,pfscan_LisH_dimerisation	-	no_errors	NPAT	HGNC	ENSG00000149308				63	0	0.00	50	3	5.66
NPR2	0	genome.wustl.edu	37	9	35792937	35792937	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	9	35792937	35792937	C	T	SNP	NPR2	ENST00000342694	human	ensembl	74_37	+1	known	missense	c.532	p.R178W	1.000	pfam_ANF_lig-bd_rcpt,superfamily_Peripla_BP_I	pfam_A/G_cyclase,pfam_ANF_lig-bd_rcpt,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Prot_kinase_dom,superfamily_Peripla_BP_I,superfamily_A/G_cyclase,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_A/G_cyclase,prints_Ntpep_rcpt,pfscan_Prot_kinase_dom,pfscan_A/G_cyclase	-	no_errors	NPR2	HGNC	ENSG00000159899	tier1	-	-	27	0	0.00	28	4	12.50
NRXN1	0	genome.wustl.edu	37	2	50148604	50148604	+	RNA	SNP	G	G	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	50148604	50148604	G	C	SNP	NRXN1	ENST00000484192	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.773	-	-	-	no_errors	NRXN1	HGNC	ENSG00000179915	tier1	-	-	60	0	0.00	41	14	25.00
OBSCN	0	genome.wustl.edu	37	1	228527712	228527712	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	228527712	228527712	G	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.17325	p.Q5775H	0.944	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1	-	-	17	0	0.00	20	7	25.93
OR2G6	0	genome.wustl.edu	37	1	248685672	248685672	+	Nonsense_Mutation	SNP	C	C	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	248685672	248685672	C	A	SNP	OR2G6	ENST00000343414	human	ensembl	74_37	+1	known	nonsense	c.725	p.S242*	0.000	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2G6	HGNC	ENSG00000188558	tier1	-	-	60	0	0.00	54	4	6.90
OR51E2	0	genome.wustl.edu	37	11	4703783	4703783	+	Silent	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	11	4703783	4703783	G	A	SNP	OR51E2	ENST00000396950	human	ensembl	74_37	-1	known	silent	c.159	p.S53	0.974	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51E2	HGNC	ENSG00000167332	tier1	-	-	65	0	0.00	41	4	8.89
OR5AP2	0	genome.wustl.edu	37	11	56409727	56409727	+	Silent	SNP	G	G	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	11	56409727	56409727	G	C	SNP	OR5AP2	ENST00000544374	human	ensembl	74_37	-1	known	silent	c.192	p.T64	0.001	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5AP2	HGNC	ENSG00000172464	tier1	-	-	21	0	0.00	25	5	16.67
OR5I1	0	genome.wustl.edu	37	11	55703513	55703513	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	11	55703513	55703513	A	G	SNP	OR5I1	ENST00000301532	human	ensembl	74_37	-1	known	missense	c.364	p.Y122H	0.638	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5I1	HGNC	ENSG00000167825				29	0	0.00	25	2	7.41
OSBPL1A	0	genome.wustl.edu	37	18	21746587	21746587	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	18	21746587	21746587	C	T	SNP	OSBPL1A	ENST00000319481	human	ensembl	74_37	-1	known	missense	c.2615	p.C872Y	1.000	pfam_Oxysterol-bd	pfam_Oxysterol-bd,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Pleckstrin_homology,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,prints_Ankyrin_rpt	-	no_errors	OSBPL1A	HGNC	ENSG00000141447				75	0	0.00	28	2	6.67
OVCH1	0	genome.wustl.edu	37	12	29627998	29627998	+	Silent	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	12	29627998	29627998	G	T	SNP	OVCH1	ENST00000318184	human	ensembl	74_37	-1	known	silent	c.1596	p.P532	0.001	superfamily_CUB_dom	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,smart_Peptidase_S1,smart_CUB_dom,pfscan_CUB_dom,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	OVCH1	HGNC	ENSG00000187950	tier1	-	-	54	0	0.00	56	4	6.67
PAN3	0	genome.wustl.edu	37	13	28750681	28750681	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	13	28750681	28750681	C	T	SNP	PAN3	ENST00000380958	human	ensembl	74_37	+1	known	missense	c.604	p.P202S	1.000	NULL	superfamily_Kinase-like_dom,smart_Znf_CCCH,pfscan_Prot_kinase_dom	-	no_errors	PAN3	HGNC	ENSG00000152520	tier1	-	-	65	0	0.00	59	4	6.35
PANK3	0	genome.wustl.edu	37	5	167988397	167988397	+	Splice_Site	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	5	167988397	167988397	C	T	SNP	PANK3	ENST00000239231	human	ensembl	74_37	-1	known	splice_site	c.936+1	e5+1	1.000	-	-	-	no_errors	PANK3	HGNC	ENSG00000120137				38	0	0.00	56	3	5.00
PCDH11X	0	genome.wustl.edu	37	X	91873845	91873845	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	X	91873845	91873845	C	T	SNP	PCDH11X	ENST00000373094	human	ensembl	74_37	+1	known	missense	c.3950	p.S1317L	0.998	NULL	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH11X	HGNC	ENSG00000102290	tier1	-	-	87	0	0.00	53	25	32.05
PCLO	0	genome.wustl.edu	37	7	82583352	82583352	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	7	82583352	82583352	T	C	SNP	PCLO	ENST00000333891	human	ensembl	74_37	-1	known	missense	c.6917	p.K2306R	0.229	NULL	pfam_Znf_piccolo,pfam_C2_dom,pfam_PDZ,superfamily_C2_dom,superfamily_PDZ,superfamily_Znf_FYVE_PHD,smart_PDZ,smart_C2_dom,pfscan_C2_dom,pfscan_PDZ	-	no_errors	PCLO	HGNC	ENSG00000186472	tier1	-	-	66	0	0.00	49	12	19.67
PCSK7	0	genome.wustl.edu	37	11	117089269	117089269	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	11	117089269	117089269	G	T	SNP	PCSK7	ENST00000320934	human	ensembl	74_37	-1	known	missense	c.1447	p.P483T	1.000	superfamily_Galactose-bd-like	pfam_Peptidase_S8/S53_dom,pfam_PrprotnconvertsP,superfamily_Peptidase_S8/S53_dom,superfamily_Galactose-bd-like,superfamily_Prot_inh_propept,prints_Peptidase_S8_subtilisin-rel	-	no_errors	PCSK7	HGNC	ENSG00000160613	tier1	-	-	38	0	0.00	19	3	13.64
PDE8A	0	genome.wustl.edu	37	15	85619146	85619146	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	15	85619146	85619146	G	A	SNP	PDE8A	ENST00000310298	human	ensembl	74_37	+1	known	missense	c.488	p.R163H	1.000	pfam_Sig_transdc_resp-reg_receiver,superfamily_CheY-like_superfamily	pfam_PDEase_catalytic_dom,pfam_Sig_transdc_resp-reg_receiver,pfam_PAS_fold,pfam_PAS_4,superfamily_PAS,superfamily_CheY-like_superfamily,smart_HD/PDEase_dom,pfscan_PAS,prints_PDEase,tigrfam_PAS	-	no_errors	PDE8A	HGNC	ENSG00000073417	tier1	-	-	66	0	0.00	60	4	6.25
PDGFRA	0	genome.wustl.edu	37	4	55146650	55146650	+	Splice_Site	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	4	55146650	55146650	G	A	SNP	PDGFRA	ENST00000257290	human	ensembl	74_37	+1	known	splice_site	c.2323+1	e15+1	1.000	-	-	-	no_errors	PDGFRA	HGNC	ENSG00000134853	tier1	-	-	63	0	0.00	30	4	11.76
PLEKHA3	0	genome.wustl.edu	37	2	179355543	179355543	+	Splice_Site	SNP	T	T	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	179355543	179355543	T	C	SNP	PLEKHA3	ENST00000234453	human	ensembl	74_37	+1	known	splice_site	c.313+2	e3+2	1.000	-	-	-	no_errors	PLEKHA3	HGNC	ENSG00000116095	tier1	-	-	32	0	0.00	27	10	27.03
PLXNA2	0	genome.wustl.edu	37	1	208252790	208252790	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	208252790	208252790	G	T	SNP	PLXNA2	ENST00000367033	human	ensembl	74_37	-1	known	missense	c.2401	p.L801I	1.000	superfamily_Plexin-like_fold	pfam_Plexin_cytoplasmic_RasGAP_dom,pfam_Semap_dom,pfam_IPT,pfam_Plexin_repeat,superfamily_Semap_dom,superfamily_Rho_GTPase_activation_prot,superfamily_Ig_E-set,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_IPT,pfscan_Semap_dom	-	no_errors	PLXNA2	HGNC	ENSG00000076356				19	0	0.00	31	5	13.89
PMEPA1	0	genome.wustl.edu	37	20	56284579	56284579	+	Silent	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	20	56284579	56284579	G	A	SNP	PMEPA1	ENST00000341744	human	ensembl	74_37	-1	known	silent	c.60	p.V20	1.000	NULL	NULL	-	no_errors	PMEPA1	HGNC	ENSG00000124225	tier1	-	-	71	0	0.00	48	17	26.15
PPP1R13B	0	genome.wustl.edu	37	14	104206296	104206296	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	14	104206296	104206296	G	C	SNP	PPP1R13B	ENST00000202556	human	ensembl	74_37	-1	known	missense	c.2457	p.D819E	0.127	NULL	pfam_Ankyrin_rpt,pfam_SH3_domain,pfam_SH3_2,superfamily_Ankyrin_rpt-contain_dom,superfamily_SH3_domain,smart_Ankyrin_rpt,smart_SH3_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_SH3_domain,prints_SH3_domain	-	no_errors	PPP1R13B	HGNC	ENSG00000088808				36	0	0.00	35	2	5.41
PPP1R2	0	genome.wustl.edu	37	3	195251628	195251628	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	3	195251628	195251628	G	C	SNP	PPP1R2	ENST00000328432	human	ensembl	74_37	-1	known	missense	c.297	p.I99M	0.132	pfam_PPI-2	pfam_PPI-2	-	no_errors	PPP1R2	HGNC	ENSG00000184203	tier1	-	-	52	0	0.00	34	32	48.48
PRDM10	0	genome.wustl.edu	37	11	129827734	129827734	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	11	129827734	129827734	C	A	SNP	PRDM10	ENST00000358825	human	ensembl	74_37	-1	known	missense	c.141	p.Q47H	1.000	NULL	pfam_Znf_C2H2,pfam_Znf_C2H2_jaz,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	PRDM10	HGNC	ENSG00000170325				35	0	0.00	39	4	9.30
PRPF4	0	genome.wustl.edu	37	9	116038865	116038865	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	9	116038865	116038865	C	T	SNP	PRPF4	ENST00000374198	human	ensembl	74_37	+1	known	missense	c.68	p.P23L	0.995	NULL	pfam_WD40_repeat,pfam_PRP4-like,superfamily_WD40_repeat_dom,smart_SFM,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	PRPF4	HGNC	ENSG00000136875	tier1	-	-	47	0	0.00	52	4	7.14
PRR16	0	genome.wustl.edu	37	5	120022157	120022157	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	5	120022157	120022157	G	T	SNP	PRR16	ENST00000407149	human	ensembl	74_37	+1	known	missense	c.668	p.R223L	1.000	NULL	NULL	-	no_errors	PRR16	HGNC	ENSG00000184838				29	0	0.00	28	2	6.45
PRRT1	0	genome.wustl.edu	37	6	32118208	32118208	+	Silent	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	6	32118208	32118208	C	T	SNP	PRRT1	ENST00000211413	human	ensembl	74_37	-1	known	silent	c.495	p.A165	0.806	NULL	pfam_CD225/Dispanin_fam	-	no_errors	PRRT1	HGNC	ENSG00000204314				17	0	0.00	13	12	48.00
PSMD1	0	genome.wustl.edu	37	2	231927025	231927025	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	231927025	231927025	G	T	SNP	PSMD1	ENST00000308696	human	ensembl	74_37	+1	known	missense	c.124	p.V42L	1.000	superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn2	pfam_Proteasome/cyclosome_rpt,superfamily_ARM-type_fold,pirsf_26S_Psome_Rpn2	-	no_errors	PSMD1	HGNC	ENSG00000173692				39	0	0.00	25	2	7.41
PTGR2	0	genome.wustl.edu	37	14	74325551	74325551	+	RNA	SNP	T	T	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	14	74325551	74325551	T	A	SNP	PTGR2	ENST00000553326	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.057	-	-	-	no_errors	PTGR2	HGNC	ENSG00000140043	tier1	-	-	89	0	0.00	68	4	5.56
PTPN6	0	genome.wustl.edu	37	12	7064025	7064025	+	Silent	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	12	7064025	7064025	C	T	SNP	PTPN6	ENST00000456013	human	ensembl	74_37	+1	known	silent	c.384	p.G128	0.027	pfam_SH2,smart_SH2,pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_SH2	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_SH2,smart_SH2,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pirsf_Tyr_Pase_non-rcpt_typ-6/11,pfscan_SH2,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_SH2	-	no_errors	PTPN6	HGNC	ENSG00000111679	tier1	-	-	56	0	0.00	42	4	8.70
PTPRM	0	genome.wustl.edu	37	18	7955355	7955355	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	18	7955355	7955355	G	T	SNP	PTPRM	ENST00000400060	human	ensembl	74_37	+1	known	missense	c.1075	p.G359W	0.997	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRM	HGNC	ENSG00000173482	tier1	-	-	49	0	0.00	49	4	7.55
PTPRM	0	genome.wustl.edu	37	18	8314802	8314802	+	Nonsense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	18	8314802	8314802	C	T	SNP	PTPRM	ENST00000400060	human	ensembl	74_37	+1	known	nonsense	c.2869	p.Q957*	1.000	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_MAM_dom,pfam_Fibronectin_type3,pfam_Immunoglobulin,superfamily_ConA-like_lec_gl_sf,superfamily_Fibronectin_type3,smart_MAM_dom,smart_Ig_sub,smart_Fibronectin_type3,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_Fibronectin_type3,pfscan_MAM_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,pfscan_Ig-like_dom,prints_Tyr_Pase_rcpt/non-rcpt,prints_MAM_dom	-	no_errors	PTPRM	HGNC	ENSG00000173482	tier1	-	-	53	0	0.00	54	4	6.90
PTX4	0	genome.wustl.edu	37	16	1537581	1537581	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	16	1537581	1537581	C	T	SNP	PTX4	ENST00000447419	human	ensembl	74_37	-1	known	missense	c.532	p.A178T	0.001	NULL	pfam_Pentaxin,pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Pentaxin,prints_Pentaxin	-	no_errors	PTX4	HGNC	ENSG00000251692				83	0	0.00	57	4	6.56
R3HCC1L	0	genome.wustl.edu	37	10	100003861	100003861	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	10	100003861	100003861	G	T	SNP	R3HCC1L	ENST00000370584	human	ensembl	74_37	+1	known	missense	c.2283	p.L761F	0.997	NULL	NULL	-	no_errors	R3HCC1L	HGNC	ENSG00000166024				55	0	0.00	49	4	7.55
RBM46	0	genome.wustl.edu	37	4	155718963	155718963	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	4	155718963	155718963	G	T	SNP	RBM46	ENST00000281722	human	ensembl	74_37	+1	known	missense	c.152	p.G51V	1.000	tigrfam_HnRNP_R/Q_splicing_fac	pfam_RRM_dom,smart_RRM_dom,pfscan_RRM_dom,tigrfam_HnRNP_R/Q_splicing_fac	-	no_errors	RBM46	HGNC	ENSG00000151962	tier1	-	-	40	0	0.00	17	3	15.00
RELB	0	genome.wustl.edu	37	19	45528625	45528625	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	45528625	45528625	A	G	SNP	RELB	ENST00000221452	human	ensembl	74_37	+1	known	missense	c.701	p.E234G	1.000	pfam_RHD,superfamily_p53-like_TF_DNA-bd,pfscan_RHD	pfam_RHD,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NF_Rel_Dor	-	no_errors	RELB	HGNC	ENSG00000104856	tier1	-	-	55	0	0.00	39	4	9.30
RIN2	0	genome.wustl.edu	37	20	19956307	19956307	+	Silent	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	20	19956307	19956307	C	T	SNP	RIN2	ENST00000255006	human	ensembl	74_37	+1	known	silent	c.1785	p.C595	1.000	NULL	pfam_VPS9,pfam_Ras-assoc,smart_VPS9_subgr,smart_Ras-assoc,pfscan_Ras-assoc,pfscan_SH2,pfscan_VPS9	-	no_errors	RIN2	HGNC	ENSG00000132669				64	0	0.00	45	3	6.25
ROCK1	0	genome.wustl.edu	37	18	18547850	18547850	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	18	18547850	18547850	T	C	SNP	ROCK1	ENST00000399799	human	ensembl	74_37	-1	known	missense	c.3055	p.R1019G	1.000	pirsf_Rho-assoc_coiled-coil_kin	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Rho-bd_dom,pfam_HR1_rho-bd,pfam_Pleckstrin_homology,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,smart_Pleckstrin_homology,smart_Prot_Kinase_C-like_PE/DAG-bd,pirsf_Rho-assoc_coiled-coil_kin,pfscan_Pleckstrin_homology,pfscan_Prot_Kinase_C-like_PE/DAG-bd,pfscan_Prot_kinase_dom	-	no_errors	ROCK1	HGNC	ENSG00000067900	tier1	-	-	50	0	0.00	41	18	30.51
RP1	0	genome.wustl.edu	37	8	55542624	55542624	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	8	55542624	55542624	T	C	SNP	RP1	ENST00000220676	human	ensembl	74_37	+1	known	missense	c.6182	p.I2061T	0.104	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1	HGNC	ENSG00000104237	tier1	-	-	43	0	0.00	29	12	29.27
RPL37A	0	genome.wustl.edu	37	2	217364062	217364062	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	217364062	217364062	A	T	SNP	RPL37A	ENST00000491306	human	ensembl	74_37	+1	known	missense	c.73	p.M25L	1.000	pfam_Ribosomal_L37ae,superfamily_Ribosomal_zn-bd,tigrfam_Ribosomal_L37ae	pfam_Ribosomal_L37ae,superfamily_Ribosomal_zn-bd,tigrfam_Ribosomal_L37ae	-	no_errors	RPL37A	HGNC	ENSG00000197756	tier1	-	-	30	0	0.00	26	6	18.75
RYR2	0	genome.wustl.edu	37	1	237608790	237608790	+	Silent	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	237608790	237608790	G	T	SNP	RYR2	ENST00000360064	human	ensembl	74_37	+1	known	silent	c.1254	p.R418	0.993	NULL	pfam_Ca-rel_channel,pfam_Ryanodine_rcpt,pfam_Ryanrecept_TM4-6,pfam_SPRY_rcpt,pfam_Ins145_P3_rcpt,pfam_MIR_motif,pfam_RIH_assoc-dom,pfam_Ion_trans_dom,superfamily_MIR_motif,superfamily_ConA-like_lec_gl_sf,smart_MIR_motif,smart_SPla/RYanodine_receptor_subgr,prints_Ryan_recept,pfscan_B30.2/SPRY,pfscan_EF_hand_dom,pfscan_MIR_motif	-	no_errors	RYR2	HGNC	ENSG00000198626	tier1	-	-	68	0	0.00	72	4	5.26
SBNO2	0	genome.wustl.edu	37	19	1127692	1127692	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	1127692	1127692	C	T	SNP	SBNO2	ENST00000361757	human	ensembl	74_37	-1	known	missense	c.352	p.V118M	0.043	NULL	superfamily_P-loop_NTPase	-	no_errors	SBNO2	HGNC	ENSG00000064932	tier1	-	-	67	0	0.00	47	4	7.84
SCN10A	0	genome.wustl.edu	37	3	38738994	38738994	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	3	38738994	38738994	G	T	SNP	SCN10A	ENST00000449082	human	ensembl	74_37	-1	known	missense	c.5717	p.P1906Q	0.898	NULL	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_asu,prints_PKD_2	-	no_errors	SCN10A	HGNC	ENSG00000185313	tier1	-	-	53	0	0.00	38	4	9.52
SDHD	0	genome.wustl.edu	37	11	111965683	111965683	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	11	111965683	111965683	T	C	SNP	SDHD	ENST00000375549	human	ensembl	74_37	+1	known	missense	c.469	p.W157R	1.000	pfam_CybS	pfam_CybS	-	no_errors	SDHD	HGNC	ENSG00000204370	tier1	-	-	192	0	0.00	136	12	8.11
SEC14L2	0	genome.wustl.edu	37	22	30811777	30811777	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	22	30811777	30811777	A	G	SNP	SEC14L2	ENST00000312932	human	ensembl	74_37	+1	known	missense	c.694	p.I232V	0.470	pfam_CRAL-TRIO_dom,superfamily_CRAL-TRIO_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom	pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_GOLD,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,pfscan_CRAL-TRIO_dom,pfscan_GOLD,prints_CRAL-bd_toc_tran	-	no_errors	SEC14L2	HGNC	ENSG00000100003	tier1	-	-	29	0	0.00	6	5	45.45
SEC1P	0	genome.wustl.edu	37	19	49176486	49176486	+	RNA	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	49176486	49176486	G	T	SNP	SEC1P	ENST00000430145	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SEC1P	HGNC	ENSG00000232871	tier1	-	-	36	0	0.00	37	4	9.76
SEH1L	0	genome.wustl.edu	37	18	12955479	12955479	+	Silent	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	18	12955479	12955479	A	G	SNP	SEH1L	ENST00000399892	human	ensembl	74_37	+1	known	silent	c.180	p.V60	0.998	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_G-protein_beta_WD-40_rep	-	no_errors	SEH1L	HGNC	ENSG00000085415	tier1	rs140218685	-	74	0	0.00	60	18	23.08
SERINC3	0	genome.wustl.edu	37	20	43133460	43133460	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	20	43133460	43133460	C	T	SNP	SERINC3	ENST00000255175	human	ensembl	74_37	-1	known	missense	c.856	p.A286T	1.000	pfam_TMS_TDE	pfam_TMS_TDE	-	no_errors	SERINC3	HGNC	ENSG00000132824				53	0	0.00	45	4	8.16
SERTAD3	0	genome.wustl.edu	37	19	40947446	40947446	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	40947446	40947446	C	G	SNP	SERTAD3	ENST00000322354	human	ensembl	74_37	-1	known	missense	c.542	p.W181S	1.000	NULL	pfam_SERTA,pfscan_SERTA	-	no_errors	SERTAD3	HGNC	ENSG00000167565	tier1	-	-	39	0	0.00	24	7	22.58
SHCBP1	0	genome.wustl.edu	37	16	46650016	46650016	+	Silent	SNP	T	T	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	16	46650016	46650016	T	C	SNP	SHCBP1	ENST00000303383	human	ensembl	74_37	-1	known	silent	c.438	p.E146	0.036	NULL	superfamily_Pectin_lyase_fold/virulence,smart_PbH1	-	no_errors	SHCBP1	HGNC	ENSG00000171241	tier1	-	-	39	0	0.00	39	9	18.75
SHMT2	0	genome.wustl.edu	37	12	57626051	57626051	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	12	57626051	57626051	C	T	SNP	SHMT2	ENST00000393827	human	ensembl	74_37	+1	known	missense	c.254	p.S85L	0.973	pirsf_Ser_HO-MeTrfase	pfam_Ser_HO-MeTrfase,superfamily_PyrdxlP-dep_Trfase,pirsf_Ser_HO-MeTrfase	-	no_errors	SHMT2	HGNC	ENSG00000182199				58	0	0.00	37	3	7.50
SHROOM4	0	genome.wustl.edu	37	X	50381301	50381301	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	X	50381301	50381301	C	T	SNP	SHROOM4	ENST00000289292	human	ensembl	74_37	-1	known	missense	c.277	p.A93T	0.884	superfamily_PDZ	pfam_ASD2,pfam_PDZ,superfamily_PDZ,smart_PDZ,pfscan_PDZ	-	no_errors	SHROOM4	HGNC	ENSG00000158352	tier1	rs145605338	-	65	0	0.00	37	5	11.90
SKI	0	genome.wustl.edu	37	1	2237626	2237626	+	Silent	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	2237626	2237626	G	A	SNP	SKI	ENST00000378536	human	ensembl	74_37	+1	known	silent	c.1935	p.R645	1.000	NULL	pfam_c-SKI_SMAD4-bd_dom,pfam_Transform_Ski,superfamily_SAND_dom-like,superfamily_DNA-bd_dom_put	-	no_errors	SKI	HGNC	ENSG00000157933				49	0	0.00	40	4	9.09
SLC30A8	0	genome.wustl.edu	37	8	118175721	118175721	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	8	118175721	118175721	G	T	SNP	SLC30A8	ENST00000456015	human	ensembl	74_37	+1	known	missense	c.781	p.A261S	0.998	pfam_Cation_efflux,tigrfam_Cation_efflux	pfam_Cation_efflux,tigrfam_Cation_efflux	-	no_errors	SLC30A8	HGNC	ENSG00000164756				57	0	0.00	38	3	7.32
SLC41A2	0	genome.wustl.edu	37	12	105199022	105199022	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	12	105199022	105199022	C	T	SNP	SLC41A2	ENST00000258538	human	ensembl	74_37	-1	known	missense	c.1630	p.A544T	1.000	pfam_SLC41_membr_dom	pfam_SLC41_membr_dom	-	no_errors	SLC41A2	HGNC	ENSG00000136052				47	0	0.00	38	2	5.00
SLC5A10	0	genome.wustl.edu	37	17	18862953	18862953	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	17	18862953	18862953	G	T	SNP	SLC5A10	ENST00000395647	human	ensembl	74_37	+1	known	missense	c.325	p.V109L	0.996	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	pfam_Na/solute_symporter,pfscan_Na/solute_symporter,tigrfam_Na/solute_symporter_subgr	-	no_errors	SLC5A10	HGNC	ENSG00000154025	tier1	-	-	37	0	0.00	18	4	18.18
SLC8A2	0	genome.wustl.edu	37	19	47969220	47969220	+	Silent	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	47969220	47969220	G	T	SNP	SLC8A2	ENST00000236877	human	ensembl	74_37	-1	known	silent	c.441	p.V147	1.000	pfam_NaCa_Exmemb,tigrfam_Na_Ca_Ex	pfam_Calx_beta,pfam_NaCa_Exmemb,smart_Calx_beta,prints_Na_Ca_Ex,tigrfam_Na_Ca_Ex	-	no_errors	SLC8A2	HGNC	ENSG00000118160	tier1	-	-	37	0	0.00	30	4	11.76
SLC9A4	0	genome.wustl.edu	37	2	103095550	103095550	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	103095550	103095550	C	-	DEL	SLC9A4	ENST00000295269	human	ensembl	74_37	+1	known	frame_shift_del	c.509	p.L171fs	1.000	pfam_Cation/H_exchanger,tigrfam_NaH_exchanger	pfam_Cation/H_exchanger,prints_NaH_exchanger,prints_Na/H_exchanger_2,tigrfam_NaH_exchanger	-	no_errors	SLC9A4	HGNC	ENSG00000180251	tier1			50	0	0.00	27	5	15.62
SMC3	0	genome.wustl.edu	37	10	112362581	112362581	+	Splice_Site	SNP	A	A	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	10	112362581	112362581	A	T	SNP	SMC3	ENST00000361804	human	ensembl	74_37	+1	known	splice_site	c.3298-2	e27-2	0.998	-	-	-	no_errors	SMC3	HGNC	ENSG00000108055				37	0	0.00	33	3	8.33
SORCS1	0	genome.wustl.edu	37	10	108412176	108412176	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	10	108412176	108412176	T	A	SNP	SORCS1	ENST00000344440	human	ensembl	74_37	-1	known	missense	c.2439	p.Q813H	0.997	pfam_PKD_dom,superfamily_PKD_dom	pfam_PKD_dom,superfamily_PKD_dom,smart_VPS10,pfscan_PKD_dom	-	no_errors	SORCS1	HGNC	ENSG00000108018				68	0	0.00	57	3	5.00
SPATA31D1	0	genome.wustl.edu	37	9	84608684	84608684	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	9	84608684	84608684	T	C	SNP	SPATA31D1	ENST00000344803	human	ensembl	74_37	+1	known	missense	c.3299	p.V1100A	0.000	NULL	NULL	-	no_errors	SPATA31D1	HGNC	ENSG00000214929	tier1	-	-	74	0	0.00	57	4	6.56
SPOCD1	0	genome.wustl.edu	37	1	32267288	32267288	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	32267288	32267288	G	T	SNP	SPOCD1	ENST00000360482	human	ensembl	74_37	-1	known	missense	c.1402	p.H468N	0.050	NULL	pfam_TFIIS_cen_dom,pfam_SPOC_C,superfamily_TFIIS_cen_dom,smart_TFS2M	-	no_errors	SPOCD1	HGNC	ENSG00000134668				40	0	0.00	36	2	5.26
SPTA1	0	genome.wustl.edu	37	1	158651381	158651381	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	158651381	158651381	C	T	SNP	SPTA1	ENST00000368147	human	ensembl	74_37	-1	known	missense	c.467	p.R156Q	0.995	NULL	pfam_Spectrin_repeat,pfam_EF-hand_Ca_insen,pfam_SH3_domain,pfam_SH3_2,superfamily_SH3_domain,smart_Spectrin/alpha-actinin,smart_SH3_domain,pfscan_EF_hand_dom,pfscan_SH3_domain,prints_Spectrin_alpha_SH3	-	no_errors	SPTA1	HGNC	ENSG00000163554	tier1	-	-	63	0	0.00	46	15	24.59
SREK1	0	genome.wustl.edu	37	5	65476614	65476614	+	RNA	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	5	65476614	65476614	A	G	SNP	SREK1	ENST00000284041	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SREK1	HGNC	ENSG00000153914	tier1	-	-	24	0	0.00	10	14	58.33
STIL	0	genome.wustl.edu	37	1	47748120	47748120	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	47748120	47748120	T	A	SNP	STIL	ENST00000371877	human	ensembl	74_37	-1	known	missense	c.1145	p.K382M	0.144	NULL	NULL	-	no_errors	STIL	HGNC	ENSG00000123473				67	0	0.00	69	4	5.48
STK38	0	genome.wustl.edu	37	6	36483136	36483136	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	6	36483136	36483136	G	T	SNP	STK38	ENST00000229812	human	ensembl	74_37	-1	known	missense	c.648	p.D216E	1.000	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Pkinase_C,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_AGC-kinase_C,pfscan_Prot_kinase_dom	-	no_errors	STK38	HGNC	ENSG00000112079				53	0	0.00	42	3	6.67
SUMF1	0	genome.wustl.edu	37	3	4458863	4458863	+	Silent	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	3	4458863	4458863	G	T	SNP	SUMF1	ENST00000448413	human	ensembl	74_37	-1	known	silent	c.789	p.G263	0.994	pfam_FGE_dom,superfamily_C-type_lectin_fold	pfam_FGE_dom,superfamily_C-type_lectin_fold	-	no_errors	SUMF1	HGNC	ENSG00000144455	tier1	-	-	49	0	0.00	28	6	17.65
SUPT6H	0	genome.wustl.edu	37	17	27020751	27020751	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	17	27020751	27020751	A	T	SNP	SUPT6H	ENST00000314616	human	ensembl	74_37	+1	known	missense	c.3671	p.Q1224L	1.000	smart_RNA-binding_domain_S1,pirsf_TF_Spt6	pfam_Rbsml_prot_S1_RNA-bd_dom,pfam_SH2,superfamily_NA-bd_OB-fold,smart_YqgF/RNaseH-like_dom,smart_RNA-binding_domain_S1,smart_SH2,pirsf_TF_Spt6,pfscan_SH2,pfscan_Rbsml_prot_S1_RNA-bd_dom	-	no_errors	SUPT6H	HGNC	ENSG00000109111	tier1	-	-	57	0	0.00	41	7	14.58
TFPI	0	genome.wustl.edu	37	2	188343494	188343494	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	188343494	188343494	G	C	SNP	TFPI	ENST00000339091	human	ensembl	74_37	-1	known	missense	c.665	p.A222G	1.000	pirsf_Prot_inhib_I2_TFPI	pirsf_Prot_inhib_I2_TFPI,pfam_Prot_inh_Kunz-m,superfamily_Prot_inh_Kunz-m,smart_Prot_inh_Kunz-m,prints_Prot_inh_Kunz-m,pfscan_Prot_inh_Kunz-m	-	no_errors	TFPI	HGNC	ENSG00000003436				54	0	0.00	56	3	5.08
TGFBR2	0	genome.wustl.edu	37	3	30691784	30691784	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	3	30691784	30691784	A	G	SNP	TGFBR2	ENST00000359013	human	ensembl	74_37	+1	known	missense	c.361	p.T121A	1.000	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto	pirsf_Transform_growth_fac-b_typ-2,pfam_Transforming_GF_b_rcpt_2_ecto,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,prints_TGFB_receptor,pfscan_Prot_kinase_dom	-	no_errors	TGFBR2	HGNC	ENSG00000163513	tier1	-	-	41	0	0.00	14	10	41.67
TLL2	0	genome.wustl.edu	37	10	98136519	98136519	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	10	98136519	98136519	G	T	SNP	TLL2	ENST00000357947	human	ensembl	74_37	-1	known	missense	c.2378	p.P793H	1.000	pirsf_BMP_1/tolloid-like,pfam_CUB_dom,superfamily_CUB_dom,smart_CUB_dom,pfscan_CUB_dom	pirsf_BMP_1/tolloid-like,pfam_CUB_dom,pfam_Peptidase_M12A,pfam_EGF-like_Ca-bd_dom,superfamily_CUB_dom,smart_Peptidase_Metallo,smart_CUB_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,prints_Peptidase_M12A,pfscan_CUB_dom,pfscan_EG-like_dom	-	no_errors	TLL2	HGNC	ENSG00000095587				82	0	0.00	76	4	5.00
TMC5	0	genome.wustl.edu	37	16	19451843	19451843	+	Silent	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	16	19451843	19451843	G	A	SNP	TMC5	ENST00000396229	human	ensembl	74_37	+1	known	silent	c.483	p.P161	0.992	NULL	pfam_TMC	-	no_errors	TMC5	HGNC	ENSG00000103534	tier1	-	-	33	0	0.00	16	6	27.27
TMEM5	0	genome.wustl.edu	37	12	64173952	64173952	+	RNA	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	12	64173952	64173952	G	A	SNP	TMEM5	ENST00000537982	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	TMEM5	HGNC	ENSG00000118600	tier1	-	-	40	0	0.00	27	4	12.90
TOP3B	0	genome.wustl.edu	37	22	22326273	22326273	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	22	22326273	22326273	C	A	SNP	TOP3B	ENST00000357179	human	ensembl	74_37	-1	known	missense	c.360	p.K120N	0.998	pfam_Toprim_domain,superfamily_Topo_IA_core_domain,smart_Toprim_domain,prints_Topo_IA	pfam_Topo_IA_cen,pfam_Toprim_domain,superfamily_Topo_IA_core_domain,smart_Toprim_domain,smart_Topo_IA_2,smart_Topo_IA_DNA-bd,prints_Topo_IA	-	no_errors	TOP3B	HGNC	ENSG00000100038				65	0	0.00	47	4	7.84
TOPORS	0	genome.wustl.edu	37	9	32543771	32543771	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	9	32543771	32543771	T	A	SNP	TOPORS	ENST00000360538	human	ensembl	74_37	-1	known	missense	c.752	p.Q251L	1.000	NULL	pfam_Znf_C3HC4_RING-type,smart_Znf_RING,pfscan_Znf_RING	-	no_errors	TOPORS	HGNC	ENSG00000197579	tier1	-	-	34	0	0.00	9	12	57.14
TP53	0	genome.wustl.edu	37	17	7578469	7578469	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	17	7578469	7578469	C	-	DEL	TP53	ENST00000269305	human	ensembl	74_37	-1	known	frame_shift_del	c.461	p.G154fs	0.872	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1			34	0	0.00	14	7	33.33
TP53	0	genome.wustl.edu	37	17	7579406	7579406	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	17	7579406	7579406	G	T	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	nonsense	c.281	p.S94*	1.000	NULL	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	-	-	95	0	0.00	73	16	17.98
TPMT	0	genome.wustl.edu	37	6	18130964	18130964	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	6	18130964	18130964	C	G	SNP	TPMT	ENST00000309983	human	ensembl	74_37	-1	known	missense	c.673	p.E225Q	1.000	pfam_TPMT,pirsf_Thiopurine_S-MeTrfase	pfam_TPMT,pirsf_Thiopurine_S-MeTrfase	-	no_errors	TPMT	HGNC	ENSG00000137364	tier1	-	-	68	0	0.00	40	7	14.89
TPPP3	0	genome.wustl.edu	37	16	67425008	67425008	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	16	67425008	67425008	C	T	SNP	TPPP3	ENST00000290942	human	ensembl	74_37	-1	known	missense	c.7	p.A3T	0.102	NULL	pfam_P25-alpha	-	no_errors	TPPP3	HGNC	ENSG00000159713	tier1	-	-	67	0	0.00	41	4	8.89
TRIM42	0	genome.wustl.edu	37	3	140397293	140397293	+	Silent	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	3	140397293	140397293	C	T	SNP	TRIM42	ENST00000286349	human	ensembl	74_37	+1	known	silent	c.222	p.P74	1.000	NULL	pfam_Znf_B-box,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,smart_Znf_B-box,smart_Fibronectin_type3,pfscan_Fibronectin_type3,pfscan_Znf_B-box,pfscan_Znf_RING	-	no_errors	TRIM42	HGNC	ENSG00000155890	tier1	-	-	32	0	0.00	36	7	16.28
TRIM77	0	genome.wustl.edu	37	11	89444610	89444611	+	Frame_Shift_Ins	INS	-	-	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	11	89444610	89444611	-	A	INS	TRIM77	ENST00000398290	human	ensembl	74_37	+1	known	frame_shift_ins	c.444_445	p.Q151fs	0.059:0.039	NULL	pfam_SPRY_rcpt,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM77	HGNC	ENSG00000214414	tier1			55	0	0.00	63	7	10.00
TRPM2	0	genome.wustl.edu	37	21	45842268	45842268	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	21	45842268	45842268	G	A	SNP	TRPM2	ENST00000397932	human	ensembl	74_37	+1	novel	missense	c.3577	p.A1193T	0.001	NULL	pfam_Ion_trans_dom,superfamily_NUDIX_hydrolase_dom-like	-	no_errors	TRPM2	HGNC	ENSG00000142185	tier1	-	-	52	0	0.00	50	4	7.41
TSPYL2	0	genome.wustl.edu	37	X	53114892	53114892	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	X	53114892	53114892	A	G	SNP	TSPYL2	ENST00000375442	human	ensembl	74_37	+1	known	missense	c.1318	p.I440V	0.967	NULL	pfam_NAP_family	-	no_errors	TSPYL2	HGNC	ENSG00000184205	tier1	-	-	34	0	0.00	28	15	34.88
UBC	0	genome.wustl.edu	37	12	125396398	125396398	+	Silent	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	12	125396398	125396398	A	G	SNP	UBC	ENST00000339647	human	ensembl	74_37	-1	known	silent	c.1920	p.D640	1.000	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup	pfam_Ubiquitin_dom,pfam_Rad60/SUMO_like,smart_Ubiquitin_dom,pfscan_Ubiquitin_supergroup,prints_Ubiquitin	-	no_errors	UBC	HGNC	ENSG00000150991	tier1	rs8023	-	107	0	0.00	84	22	20.75
USP44	0	genome.wustl.edu	37	12	95927822	95927822	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	12	95927822	95927822	C	G	SNP	USP44	ENST00000258499	human	ensembl	74_37	-1	known	missense	c.211	p.E71Q	1.000	pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP	pfam_Peptidase_C19/C67,pfam_Znf_UBP,smart_Znf_UBP,pfscan_Znf_UBP,pfscan_Peptidase_C19/C67	-	no_errors	USP44	HGNC	ENSG00000136014				46	0	0.00	33	2	5.71
USP50	0	genome.wustl.edu	37	15	50792968	50792968	+	Nonstop_Mutation	SNP	A	A	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	15	50792968	50792968	A	G	SNP	USP50	ENST00000532404	human	ensembl	74_37	-1	known	nonstop	c.1003	p.*335R	1.000	NULL	pfam_Peptidase_C19/C67,pfscan_Peptidase_C19/C67	-	no_errors	USP50	HGNC	ENSG00000170236	tier1	-	-	48	0	0.00	40	4	9.09
VDAC2	0	genome.wustl.edu	37	10	76978897	76978897	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	10	76978897	76978897	G	T	SNP	VDAC2	ENST00000313132	human	ensembl	74_37	+1	known	missense	c.272	p.C91F	1.000	pfam_Porin_Euk/Tom40	pfam_Porin_Euk/Tom40,prints_Porin_Euk	-	no_errors	VDAC2	HGNC	ENSG00000165637	tier1	-	-	57	0	0.00	55	4	6.78
VPS13C	0	genome.wustl.edu	37	15	62305246	62305246	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	15	62305246	62305246	G	T	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	missense	c.817	p.Q273K	1.000	NULL	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	tier1	-	-	28	0	0.00	32	4	11.11
VPS16	0	genome.wustl.edu	37	20	2844831	2844831	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	20	2844831	2844831	G	A	SNP	VPS16	ENST00000380445	human	ensembl	74_37	+1	known	missense	c.1618	p.E540K	1.000	pfam_Vps16_C,pirsf_VPS16	pfam_Vps16_N,pfam_Vps16_C,pirsf_VPS16	-	no_errors	VPS16	HGNC	ENSG00000215305	tier1	-	-	96	0	0.00	62	24	27.91
XYLT1	0	genome.wustl.edu	37	16	17353097	17353097	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	16	17353097	17353097	C	-	DEL	XYLT1	ENST00000261381	human	ensembl	74_37	-1	known	frame_shift_del	c.661	p.D221fs	0.000	NULL	pfam_XylT,pfam_Glyco_trans_14	-	no_errors	XYLT1	HGNC	ENSG00000103489	tier1			36	0	0.00	26	2	7.14
ZCCHC2	0	genome.wustl.edu	37	18	60242142	60242142	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	18	60242142	60242142	C	T	SNP	ZCCHC2	ENST00000269499	human	ensembl	74_37	+1	known	missense	c.2828	p.P943L	0.979	NULL	pfam_Znf_CCHC,superfamily_Phox,superfamily_Znf_CCHC,smart_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC2	HGNC	ENSG00000141664	tier1	-	-	41	0	0.00	13	4	23.53
ZFYVE27	0	genome.wustl.edu	37	10	99511159	99511159	+	Silent	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	10	99511159	99511159	G	T	SNP	ZFYVE27	ENST00000356257	human	ensembl	74_37	+1	known	silent	c.831	p.P277	0.709	NULL	pfam_Znf_FYVE,superfamily_Znf_FYVE_PHD,smart_Znf_FYVE,pfscan_Znf_FYVE-rel	-	no_errors	ZFYVE27	HGNC	ENSG00000155256				51	0	0.00	53	4	7.02
ZIC2	0	genome.wustl.edu	37	13	100634697	100634697	+	Frame_Shift_Del	DEL	G	G	-			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	13	100634697	100634697	G	-	DEL	ZIC2	ENST00000376335	human	ensembl	74_37	+1	known	frame_shift_del	c.379	p.D128fs	1.000	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC2	HGNC	ENSG00000043355	tier1			16	0	0.00	8	2	20.00
ZNF107	0	genome.wustl.edu	37	7	64168548	64168548	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	7	64168548	64168548	C	A	SNP	ZNF107	ENST00000344930	human	ensembl	74_37	+1	known	missense	c.1866	p.N622K	0.085	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF107	HGNC	ENSG00000196247	tier1	-	-	67	0	0.00	42	14	25.00
ZNF142	0	genome.wustl.edu	37	2	219513948	219513948	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	2	219513948	219513948	G	A	SNP	ZNF142	ENST00000411696	human	ensembl	74_37	-1	known	missense	c.683	p.A228V	0.998	smart_Znf_C2H2-like	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF142	HGNC	ENSG00000115568				21	0	0.00	20	2	9.09
ZNF225	0	genome.wustl.edu	37	19	44636226	44636226	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	44636226	44636226	G	T	SNP	ZNF225	ENST00000262894	human	ensembl	74_37	+1	known	nonsense	c.1459	p.E487*	0.006	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF225	HGNC	ENSG00000256294	tier1	-	-	70	0	0.00	53	4	7.02
ZNF365	0	genome.wustl.edu	37	10	64219517	64219517	+	Silent	SNP	C	C	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	10	64219517	64219517	C	T	SNP	ZNF365	ENST00000410046	human	ensembl	74_37	+1	known	silent	c.942	p.G314	0.000	NULL	NULL	-	no_errors	ZNF365	HGNC	ENSG00000138311	tier1	-	-	48	0	0.00	22	4	15.38
ZNF536	0	genome.wustl.edu	37	19	31039530	31039530	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	31039530	31039530	G	T	SNP	ZNF536	ENST00000355537	human	ensembl	74_37	+1	known	missense	c.3004	p.G1002C	1.000	smart_Znf_C2H2-like	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF536	HGNC	ENSG00000198597				32	0	0.00	25	2	7.41
ZNF584	0	genome.wustl.edu	37	19	58927227	58927227	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	58927227	58927227	G	T	SNP	ZNF584	ENST00000322834	human	ensembl	74_37	+1	putative	missense	c.310	p.A104S	0.000	NULL	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	-	no_errors	ZNF584	HGNC	ENSG00000171574	tier1	-	-	81	0	0.00	54	5	8.47
ZNF611	0	genome.wustl.edu	37	19	53209056	53209056	+	Silent	SNP	T	T	G			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	19	53209056	53209056	T	G	SNP	ZNF611	ENST00000319783	human	ensembl	74_37	-1	known	silent	c.1252	p.R418	0.678	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF611	HGNC	ENSG00000213020				67	0	0.00	67	4	5.63
ZNF644	0	genome.wustl.edu	37	1	91406699	91406699	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	1	91406699	91406699	G	T	SNP	ZNF644	ENST00000337393	human	ensembl	74_37	-1	known	missense	c.212	p.T71K	0.964	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF644	HGNC	ENSG00000122482				36	0	0.00	38	2	5.00
ZNF747	0	genome.wustl.edu	37	16	30545838	30545838	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA4G-01A-11D-A37C-09	TCGA-VR-AA4G-10A-01D-A37F-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	105a18c9-df7e-4573-b1a2-6a987e57d553	d231404d-ece5-43c0-a8a3-e9f294ceb777	16	30545838	30545838	G	A	SNP	ZNF747	ENST00000535210	human	ensembl	74_37	-1	known	missense	c.163	p.R55W	0.579	pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,pfscan_Krueppel-associated_box	pfam_Krueppel-associated_box,pfam_Znf_C2H2,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF747	HGNC	ENSG00000169955	tier1	-	-	62	0	0.00	73	5	6.41
