Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
AADACL4	0	genome.wustl.edu	37	1	12711295	12711295	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	12711295	12711295	T	A	SNP	AADACL4	ENST00000376221	human	ensembl	74_37	+1	known	missense	c.322	p.S108T	0.137	pirsf_Arylacetamide_deacetylase	pfam_AB_hydrolase_3,pirsf_Arylacetamide_deacetylase	-	no_errors	AADACL4	HGNC	ENSG00000204518	tier1	-	-	62	0	0.00	79	35	30.70
ACAA2	0	genome.wustl.edu	37	18	47318527	47318527	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	18	47318527	47318527	C	T	SNP	ACAA2	ENST00000285093	human	ensembl	74_37	-1	known	missense	c.748	p.A250T	1.000	pfam_Thiolase_N,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	pfam_Thiolase_N,pfam_Thiolase_C,superfamily_Thiolase-like,pirsf_Thiolase,tigrfam_Thiolase	-	no_errors	ACAA2	HGNC	ENSG00000167315	tier1	-	-	51	0	0.00	52	4	7.14
ACHE	0	genome.wustl.edu	37	7	100490031	100490032	+	Frame_Shift_Ins	INS	-	-	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	7	100490031	100490032	0	G	INS	ACHE	ENST00000302913	human	ensembl	74_37	-1	known	frame_shift_ins	c.1477_1476	p.S492fs	0.000:0.000	pfam_CarbesteraseB	pfam_CarbesteraseB,pfam_AB_hydrolase_3,prints_Cholinesterase	-	no_errors	ACHE	HGNC	ENSG00000087085				70	0	0.00	168	18	9.68
ADTRP	0	genome.wustl.edu	37	6	11768590	11768590	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	6	11768590	11768590	G	T	SNP	ADTRP	ENST00000485323	human	ensembl	74_37	-1	known	nonsense	c.239	p.S80*	0.996	NULL	pfam_Far-17a_AIG1	-	no_errors	ADTRP	HGNC	ENSG00000111863	tier1	-	-	69	0	0.00	68	30	30.61
AGAP4	0	genome.wustl.edu	37	10	46321476	46321476	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	10	46321476	46321476	C	A	SNP	AGAP4	ENST00000448048	human	ensembl	74_37	-1	known	missense	c.1879	p.V627F	1.000	pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_ArfGAP,pfam_Pleckstrin_homology,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Pleckstrin_homology,smart_ArfGAP,smart_Ankyrin_rpt,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Pleckstrin_homology,pfscan_ArfGAP,prints_ArfGAP	-	no_errors	AGAP4	HGNC	ENSG00000188234	tier1	-	-	47	0	0.00	41	20	32.79
AIG1	0	genome.wustl.edu	37	6	143457998	143457998	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	6	143457998	143457998	C	G	SNP	AIG1	ENST00000275235	human	ensembl	74_37	+1	known	missense	c.168	p.I56M	1.000	pfam_Far-17a_AIG1	pfam_Far-17a_AIG1	-	no_errors	AIG1	HGNC	ENSG00000146416	tier1	-	-	42	0	0.00	28	26	48.15
AIM1	0	genome.wustl.edu	37	6	106960342	106960342	+	Silent	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	6	106960342	106960342	C	T	SNP	AIM1	ENST00000369066	human	ensembl	74_37	+1	known	silent	c.126	p.D42	0.987	NULL	pfam_Beta/gamma_crystallin,pfam_Ricin_B_lectin,superfamily_G_crystallin-rel,superfamily_Ricin_B_lectin,smart_Beta/gamma_crystallin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin,pfscan_Beta/gamma_crystallin,prints_Beta/gamma_crystallin	-	no_errors	AIM1	HGNC	ENSG00000112297				55	0	0.00	69	4	5.41
ALDH18A1	0	genome.wustl.edu	37	10	97366618	97366618	+	Silent	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	10	97366618	97366618	C	T	SNP	ALDH18A1	ENST00000371224	human	ensembl	74_37	-1	known	silent	c.2289	p.L763	0.989	superfamily_Ald_DH/histidinol_DH,pirsf_P5_carboxy_syn,tigrfam_P5_carboxy_syn	pfam_Asp/Glu/Uridylate_kinase,pfam_Aldehyde_DH_dom,superfamily_Ald_DH/histidinol_DH,superfamily_Asp/Glu/Uridylate_kinase,pirsf_P5_carboxy_syn,prints_Glu/AcGlu_kinase,tigrfam_P5_carboxy_syn,tigrfam_G-glutamylP_reductase	-	no_errors	ALDH18A1	HGNC	ENSG00000059573	tier1	-	-	65	0	0.00	53	4	7.02
AMBN	0	genome.wustl.edu	37	4	71467239	71467239	+	Silent	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	4	71467239	71467239	C	A	SNP	AMBN	ENST00000322937	human	ensembl	74_37	+1	known	silent	c.399	p.T133	0.000	pfam_Amelin,smart_Amelin	pfam_Amelin,smart_Amelin	-	no_errors	AMBN	HGNC	ENSG00000178522				40	0	0.00	51	4	7.27
ANK3	0	genome.wustl.edu	37	10	61830487	61830487	+	Silent	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	10	61830487	61830487	C	T	SNP	ANK3	ENST00000280772	human	ensembl	74_37	-1	known	silent	c.10152	p.Q3384	1.000	NULL	pfam_Ankyrin_rpt,pfam_ZU5,pfam_Death_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_DEATH-like_dom,smart_Ankyrin_rpt,smart_ZU5,smart_Death_domain,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_Death_domain,pfscan_ZU5,prints_Ankyrin_rpt	-	no_errors	ANK3	HGNC	ENSG00000151150	tier1	-	-	37	0	0.00	55	4	6.78
APLP1	0	genome.wustl.edu	37	19	36362551	36362551	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	36362551	36362551	G	A	SNP	APLP1	ENST00000221891	human	ensembl	74_37	+1	known	missense	c.575	p.G192D	1.000	pfam_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,smart_Amyloid_glyco_extra	pfam_Amyloid_glyco_heparin-bd,pfam_APP_amyloid_C,superfamily_Amyloid_glyco_E2_domain,superfamily_Amyloid_glyco_heparin-bd,superfamily_Amyloid_glyco_Cu-bd,smart_Amyloid_glyco_extra,prints_Amyloid_glyco	-	no_errors	APLP1	HGNC	ENSG00000105290				22	0	0.00	28	3	9.68
ARID1B	0	genome.wustl.edu	37	6	157099427	157099429	+	In_Frame_Del	DEL	CAG	CAG	-			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	CAG	CAG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	6	157099427	157099429	CAG	-	DEL	ARID1B	ENST00000367148	human	ensembl	74_37	+1	known	in_frame_del	c.364_366	p.Q125in_frame_del	0.974:0.990:0.991	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1B	HGNC	ENSG00000049618	tier1			9	0	0.00	8	4	33.33
ASL	0	genome.wustl.edu	37	7	65546811	65546811	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	7	65546811	65546811	C	T	SNP	ASL	ENST00000304874	human	ensembl	74_37	+1	known	missense	c.34	p.R12W	1.000	pfam_Fumarate_lyase_N,superfamily_L-Aspartase-like,tigrfam_Argininosuccinate_lyase	pfam_Fumarate_lyase_N,superfamily_L-Aspartase-like,prints_Fumarate_lyase_fam,tigrfam_Argininosuccinate_lyase	-	no_errors	ASL	HGNC	ENSG00000126522	tier1	-	-	34	0	0.00	35	26	42.62
ATP13A1	0	genome.wustl.edu	37	19	19760397	19760397	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	19760397	19760397	C	A	SNP	ATP13A1	ENST00000357324	human	ensembl	74_37	-1	known	missense	c.2611	p.A871S	1.000	pfam_HAD-like_dom,superfamily_HAD-like_dom,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Cation_typ_V,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP13A1	HGNC	ENSG00000105726	tier1	-	-	31	0	0.00	30	13	30.23
ATP5C1	0	genome.wustl.edu	37	10	7844263	7844263	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	10	7844263	7844263	C	T	SNP	ATP5C1	ENST00000356708	human	ensembl	74_37	+1	known	missense	c.668	p.A223V	1.000	pfam_ATPase_F1-cplx_gsu,superfamily_ATPase_F1_gsu_dom,tigrfam_ATPase_F1-cplx_gsu	pfam_ATPase_F1-cplx_gsu,superfamily_ATPase_F1_gsu_dom,prints_ATPase_F1-cplx_gsu,tigrfam_ATPase_F1-cplx_gsu	-	no_errors	ATP5C1	HGNC	ENSG00000165629	tier1	-	-	41	0	0.00	32	3	8.57
AURKA	0	genome.wustl.edu	37	20	54959346	54959346	+	Silent	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	20	54959346	54959346	C	T	SNP	AURKA	ENST00000312783	human	ensembl	74_37	-1	known	silent	c.354	p.Q118	0.997	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Prot_kinase_dom	-	no_errors	AURKA	HGNC	ENSG00000087586	tier1	-	-	67	0	0.00	83	20	19.42
AVIL	0	genome.wustl.edu	37	12	58204330	58204330	+	Frame_Shift_Del	DEL	A	A	-			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	12	58204330	58204330	A	-	DEL	AVIL	ENST00000257861	human	ensembl	74_37	-1	known	frame_shift_del	c.563	p.M188fs	1.000	pfam_Gelsolin_dom,smart_Villin/Gelsolin	pfam_Gelsolin_dom,pfam_Villin_headpiece,superfamily_Villin_headpiece,smart_Villin/Gelsolin,smart_Villin_headpiece,pfscan_Villin_headpiece,prints_Villin/Gelsolin	-	no_errors	AVIL	HGNC	ENSG00000135407	tier1			14	0	0.00	15	9	37.50
BRINP2	0	genome.wustl.edu	37	1	177247739	177247739	+	Silent	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	177247739	177247739	G	T	SNP	BRINP2	ENST00000361539	human	ensembl	74_37	+1	known	silent	c.1053	p.R351	1.000	NULL	pfam_MACPF,smart_MACPF	-	no_errors	BRINP2	HGNC	ENSG00000198797	tier1	-	-	40	0	0.00	15	3	16.67
C5orf46	0	genome.wustl.edu	37	5	147281335	147281335	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	5	147281335	147281335	G	C	SNP	C5orf46	ENST00000318315	human	ensembl	74_37	-1	known	missense	c.72	p.D24E	0.970	NULL	NULL	-	no_errors	C5orf46	HGNC	ENSG00000178776	tier1	-	-	47	0	0.00	29	12	29.27
C9orf142	0	genome.wustl.edu	37	9	139888246	139888246	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	9	139888246	139888246	G	A	SNP	C9orf142	ENST00000371620	human	ensembl	74_37	+1	known	missense	c.604	p.D202N	0.819	NULL	NULL	-	no_errors	C9orf142	HGNC	ENSG00000148362	tier1	-	-	60	0	0.00	104	50	32.47
CAMTA1	0	genome.wustl.edu	37	1	7796554	7796554	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	7796554	7796554	G	A	SNP	CAMTA1	ENST00000303635	human	ensembl	74_37	+1	known	missense	c.3217	p.A1073T	1.000	superfamily_Ankyrin_rpt-contain_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom	pfam_CG-1_dom,pfam_IPT,pfam_IQ_motif_EF-hand-BS,superfamily_Ig_E-set,superfamily_Ankyrin_rpt-contain_dom,superfamily_P-loop_NTPase,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_IQ_motif_EF-hand-BS	-	no_errors	CAMTA1	HGNC	ENSG00000171735	tier1	-	-	49	0	0.00	44	4	8.33
CCDC141	0	genome.wustl.edu	37	2	179736884	179736884	+	Silent	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	2	179736884	179736884	C	T	SNP	CCDC141	ENST00000420890	human	ensembl	74_37	-1	known	silent	c.2055	p.A685	0.010	NULL	pfam_Ig_I-set,pfam_Spectrin_repeat,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	CCDC141	HGNC	ENSG00000163492	tier1	-	-	45	0	0.00	31	26	45.61
CCDC39	0	genome.wustl.edu	37	3	180397551	180397551	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	3	180397551	180397551	A	G	SNP	CCDC39	ENST00000273654	human	ensembl	74_37	-1	known	missense	c.95	p.L32P	0.000	NULL	superfamily_tRNA-bd_arm	-	no_errors	CCDC39	HGNC	ENSG00000145075	tier1	-	-	93	0	0.00	81	104	56.22
CD244	0	genome.wustl.edu	37	1	160808261	160808261	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	160808261	160808261	G	T	SNP	CD244	ENST00000368033	human	ensembl	74_37	-1	known	missense	c.829	p.L277M	0.000	NULL	pfam_NK_rcpt_2B4_Ig_dom,pfscan_Ig-like_dom	-	no_errors	CD244	HGNC	ENSG00000122223				81	0	0.00	70	4	5.41
CDK5RAP2	0	genome.wustl.edu	37	9	123165255	123165255	+	Silent	SNP	C	C	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	9	123165255	123165255	C	G	SNP	CDK5RAP2	ENST00000349780	human	ensembl	74_37	-1	known	silent	c.5136	p.L1712	0.697	NULL	pfam_Spindle_assoc	-	no_errors	CDK5RAP2	HGNC	ENSG00000136861	tier1	-	-	36	0	0.00	46	28	37.84
CFLAR-AS1	0	genome.wustl.edu	37	2	202005016	202005016	+	RNA	SNP	A	A	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	2	202005016	202005016	A	G	SNP	CFLAR-AS1	ENST00000415011	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.914	-	-	-	no_errors	CFLAR-AS1	HGNC	ENSG00000226312	tier1	-	-	108	0	0.00	91	53	36.81
CHD8	0	genome.wustl.edu	37	14	21868426	21868426	+	Frame_Shift_Del	DEL	T	T	-			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	14	21868426	21868426	T	-	DEL	CHD8	ENST00000399982	human	ensembl	74_37	-1	known	frame_shift_del	c.4611	p.V1538fs	1.000	NULL	pfam_SNF2_N,pfam_Chromo_domain,pfam_BRK_domain,pfam_Helicase_C,pfam_Helicase/UvrB_dom,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	-	no_errors	CHD8	HGNC	ENSG00000100888	tier1			41	0	0.00	72	38	34.55
CLDN12	0	genome.wustl.edu	37	7	90099208	90099208	+	RNA	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	7	90099208	90099208	C	T	SNP	CLDN12	ENST00000498033	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	CLDN12	HGNC	ENSG00000157224	tier1	-	-	26	0	0.00	49	7	12.50
CNOT3	0	genome.wustl.edu	37	19	54646887	54646887	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	54646887	54646887	G	A	SNP	CNOT3	ENST00000221232	human	ensembl	74_37	+1	known	missense	c.58	p.E20K	1.000	pfam_Not_N,pirsf_CCR4-NOT_su3/5	pfam_Not_N,pfam_NOT,pirsf_CCR4-NOT_su3/5	-	no_errors	CNOT3	HGNC	ENSG00000088038				15	0	0.00	15	4	21.05
CNST	0	genome.wustl.edu	37	1	246784932	246784932	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	246784932	246784932	A	G	SNP	CNST	ENST00000366513	human	ensembl	74_37	+1	known	missense	c.581	p.H194R	1.000	NULL	NULL	-	no_errors	CNST	HGNC	ENSG00000162852	tier1	-	-	45	0	0.00	14	25	64.10
COG7	0	genome.wustl.edu	37	16	23421669	23421669	+	Silent	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	16	23421669	23421669	G	T	SNP	COG7	ENST00000307149	human	ensembl	74_37	-1	known	silent	c.1422	p.T474	1.000	pfam_COG7	pfam_COG7	-	no_errors	COG7	HGNC	ENSG00000168434	tier1	-	-	59	0	0.00	66	4	5.71
COL13A1	0	genome.wustl.edu	37	10	71678829	71678829	+	Silent	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	10	71678829	71678829	G	A	SNP	COL13A1	ENST00000356340	human	ensembl	74_37	+1	known	silent	c.1041	p.G347	0.997	pfam_Collagen	pfam_Collagen	-	no_errors	COL13A1	HGNC	ENSG00000197467	tier1	-	-	29	0	0.00	24	5	17.24
CREBBP	0	genome.wustl.edu	37	16	3788617	3788617	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	16	3788617	3788617	C	A	SNP	CREBBP	ENST00000262367	human	ensembl	74_37	-1	known	missense	c.4337	p.R1446L	1.000	pfam_Histone_H3-K56_AcTrfase_RTT109	pfam_Histone_H3-K56_AcTrfase_RTT109,pfam_Nuc_rcpt_coact_CREBbp,pfam_KIX_dom,pfam_DUF902_CREBbp,pfam_Znf_TAZ,pfam_Bromodomain,pfam_Znf_ZZ,superfamily_Bromodomain,superfamily_Znf_TAZ,superfamily_KIX_dom,superfamily_Nuc_rcpt_coact,superfamily_Znf_FYVE_PHD,smart_Znf_TAZ,smart_Bromodomain,smart_Znf_ZZ,pfscan_KIX_dom,pfscan_Znf_TAZ,pfscan_Znf_ZZ,pfscan_Bromodomain,prints_Bromodomain	-	no_errors	CREBBP	HGNC	ENSG00000005339	tier1	-	-	84	0	0.00	87	46	34.59
CUEDC1	0	genome.wustl.edu	37	17	55940323	55940324	+	RNA	INS	-	-	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	17	55940323	55940324	-	T	INS	CUEDC1	ENST00000577422	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	CUEDC1	HGNC	ENSG00000180891	tier1			13	0	0.00	12	4	25.00
DCAF12L1	0	genome.wustl.edu	37	X	125685998	125685998	+	Silent	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	X	125685998	125685998	G	A	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	silent	c.594	p.F198	0.004	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889	tier1	-	-	46	0	0.00	17	33	66.00
DHX30	0	genome.wustl.edu	37	3	47887139	47887140	+	RNA	INS	-	-	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	3	47887139	47887140	-	T	INS	DHX30	ENST00000461905	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001:0.000	-	-	-	no_errors	DHX30	HGNC	ENSG00000132153	tier1			28	0	0.00	14	9	39.13
DNALI1	0	genome.wustl.edu	37	1	38023339	38023339	+	Nonsense_Mutation	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	38023339	38023339	C	A	SNP	DNALI1	ENST00000541606	human	ensembl	74_37	+1	known	nonsense	c.9	p.Y3*	1.000	NULL	pfam_Axonemal_dynein_light_chain	-	no_errors	DNALI1	HGNC	ENSG00000163879				15	0	0.00	16	4	20.00
DOC2A	0	genome.wustl.edu	37	16	30020351	30020351	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	16	30020351	30020351	T	A	SNP	DOC2A	ENST00000350119	human	ensembl	74_37	-1	known	missense	c.493	p.I165F	0.943	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pirsf_Doc2,pfscan_C2_dom	pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pirsf_Doc2,prints_Synaptotagmin,prints_C2_dom,pfscan_C2_dom	-	no_errors	DOC2A	HGNC	ENSG00000149927	tier1	-	-	46	0	0.00	34	16	32.00
DOCK2	0	genome.wustl.edu	37	5	169412885	169412885	+	Silent	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	5	169412885	169412885	G	T	SNP	DOCK2	ENST00000256935	human	ensembl	74_37	+1	known	silent	c.2952	p.V984	1.000	superfamily_ARM-type_fold	pfam_DOCK_C,pfam_SH3_2,superfamily_SH3_domain,superfamily_Cyt_c-like_dom,superfamily_ARM-type_fold,superfamily_Ferritin-like_SF,smart_SH3_domain,pfscan_SH3_domain	-	no_errors	DOCK2	HGNC	ENSG00000134516	tier1	-	-	44	0	0.00	55	4	6.78
DPH5	0	genome.wustl.edu	37	1	101455897	101455897	+	RNA	DEL	A	A	-			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	101455897	101455897	A	-	DEL	DPH5	ENST00000370105	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.036	-	-	-	no_errors	DPH5	HGNC	ENSG00000117543	tier1			11	0	0.00	26	10	27.78
DSG1	0	genome.wustl.edu	37	18	28913582	28913582	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	18	28913582	28913582	G	T	SNP	DSG1	ENST00000257192	human	ensembl	74_37	+1	known	missense	c.715	p.G239C	1.000	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Desmoglein,prints_Cadherin,prints_Desmosomal_cadherin	-	no_errors	DSG1	HGNC	ENSG00000134760	tier1	-	-	39	0	0.00	44	4	8.33
DTYMK	0	genome.wustl.edu	37	2	242615582	242615582	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	2	242615582	242615582	C	T	SNP	DTYMK	ENST00000305784	human	ensembl	74_37	-1	known	missense	c.599	p.R200H	0.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,tigrfam_Thymidylate_kinase	-	no_errors	DTYMK	HGNC	ENSG00000168393				30	0	0.00	41	3	6.82
EEF1E1	0	genome.wustl.edu	37	6	8080173	8080173	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	6	8080173	8080173	G	T	SNP	EEF1E1	ENST00000379715	human	ensembl	74_37	-1	known	missense	c.475	p.L159M	1.000	superfamily_Glutathione-S-Trfase_C-like	pfam_GST_C,superfamily_Glutathione-S-Trfase_C-like	-	no_errors	EEF1E1	HGNC	ENSG00000124802	tier1	-	-	67	0	0.00	68	4	5.56
EEF2	0	genome.wustl.edu	37	19	3980008	3980008	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	3980008	3980008	T	C	SNP	EEF2	ENST00000309311	human	ensembl	74_37	-1	known	missense	c.1403	p.N468S	1.000	pfam_Transl_elong_EFTu/EF1A_2,superfamily_Transl_B-barrel	pfam_EF_GTP-bd_dom,pfam_Transl_elong_EFG/EF2_IV,pfam_EFG_V,pfam_Transl_elong_EFTu/EF1A_2,superfamily_P-loop_NTPase,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_Transl_B-barrel,superfamily_EFG_III-V,smart_Transl_elong_EFG/EF2_IV,smart_EFG_V,prints_EF_GTP-bd_dom,tigrfam_Small_GTP-bd_dom	-	no_errors	EEF2	HGNC	ENSG00000167658	tier1	-	-	12	0	0.00	30	9	23.08
ENSG00000214888	0	genome.wustl.edu	37	9	90474265	90474265	+	RNA	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	9	90474265	90474265	G	A	SNP	ENSG00000214888	ENST00000399186	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	XXyac-YM21GA2.7	Clone_based_vega_gene	ENSG00000214888	tier1	-	-	68	0	0.00	97	31	24.22
ENSG00000237640	0	genome.wustl.edu	37	7	99527283	99527283	+	RNA	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	7	99527283	99527283	C	T	SNP	ENSG00000237640	ENST00000456499	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.419	-	-	-	no_errors	RP4-604G5.1	Clone_based_vega_gene	ENSG00000237640	tier1	-	-	35	0	0.00	75	5	6.25
ENSG00000259172	0	genome.wustl.edu	37	15	101844107	101844107	+	RNA	SNP	G	G	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	15	101844107	101844107	G	C	SNP	ENSG00000259172	ENST00000558838	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP11-299G20.2	Clone_based_vega_gene	ENSG00000259172	tier1	-	-	88	0	0.00	129	22	14.57
ENSG00000259479	0	genome.wustl.edu	37	15	45123755	45123756	+	RNA	INS	-	-	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	15	45123755	45123756	-	C	INS	ENSG00000259479	ENST00000561384	human	ensembl	74_37	-1	putative	rna	NULL	NULL	0.632:0.983	-	-	-	no_errors	CTD-2008A1.2	Clone_based_vega_gene	ENSG00000259479	tier1			35	0	0.00	31	9	22.50
ENSG00000261720	0	genome.wustl.edu	37	16	1116262	1116262	+	RNA	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	16	1116262	1116262	G	A	SNP	ENSG00000261720	ENST00000564390	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.049	-	-	-	no_errors	RP11-161M6.5	Clone_based_vega_gene	ENSG00000261720	tier1	-	-	32	0	0.00	21	17	44.74
EPN1	0	genome.wustl.edu	37	19	56200328	56200328	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	56200328	56200328	G	A	SNP	EPN1	ENST00000411543	human	ensembl	74_37	+1	known	missense	c.904	p.A302T	1.000	smart_Ubiquitin-int_motif,pfscan_Ubiquitin-int_motif	pfam_Epsin_dom_N,pfam_ANTH_dom,superfamily_ENTH_VHS,smart_Epsin-like_N,smart_Ubiquitin-int_motif,pfscan_Epsin-like_N,pfscan_Ubiquitin-int_motif	-	no_errors	EPN1	HGNC	ENSG00000063245	tier1	-	-	25	0	0.00	20	9	31.03
FAM122C	0	genome.wustl.edu	37	X	133938243	133938243	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	X	133938243	133938243	G	T	SNP	FAM122C	ENST00000414371	human	ensembl	74_37	+1	known	nonsense	c.16	p.G6*	0.013	NULL	NULL	-	no_errors	FAM122C	HGNC	ENSG00000156500	tier1	-	-	44	0	0.00	68	4	5.56
FAM129A	0	genome.wustl.edu	37	1	184853931	184853931	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	184853931	184853931	G	T	SNP	FAM129A	ENST00000367511	human	ensembl	74_37	-1	known	missense	c.437	p.S146Y	0.685	NULL	NULL	-	no_errors	FAM129A	HGNC	ENSG00000135842	tier1	-	-	78	0	0.00	41	31	42.47
FAM3D	0	genome.wustl.edu	37	3	58635041	58635041	+	Splice_Site	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	3	58635041	58635041	C	T	SNP	FAM3D	ENST00000358781	human	ensembl	74_37	-1	known	splice_site	c.145+1	e3+1	0.627	-	-	-	no_errors	FAM3D	HGNC	ENSG00000198643	tier1	-	-	44	0	0.00	20	16	44.44
FAM57A	0	genome.wustl.edu	37	17	644588	644588	+	Silent	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	17	644588	644588	G	T	SNP	FAM57A	ENST00000308278	human	ensembl	74_37	+1	known	silent	c.552	p.T184	0.793	pfam_TLC-dom,smart_TLC-dom,pfscan_TLC-dom	pfam_TLC-dom,smart_TLC-dom,pfscan_TLC-dom	-	no_errors	FAM57A	HGNC	ENSG00000167695	tier1	-	-	37	0	0.00	56	4	6.67
FAT3	0	genome.wustl.edu	37	11	92533683	92533683	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	11	92533683	92533683	G	T	SNP	FAT3	ENST00000298047	human	ensembl	74_37	+1	known	missense	c.7504	p.V2502L	1.000	pfam_Cadherin,superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Cadherin-like,smart_Cadherin,smart_EG-like_dom,smart_Laminin_G,smart_EGF-like_Ca-bd_dom,pfscan_EG-like_dom,pfscan_Laminin_G,pfscan_Cadherin,prints_Cadherin	-	no_errors	FAT3	HGNC	ENSG00000165323				19	0	0.00	17	2	10.53
FCRL6	0	genome.wustl.edu	37	1	159779317	159779317	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	159779317	159779317	G	T	SNP	FCRL6	ENST00000368106	human	ensembl	74_37	+1	known	missense	c.730	p.D244Y	0.000	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL6	HGNC	ENSG00000181036				34	0	0.00	30	2	6.25
FGF5	0	genome.wustl.edu	37	4	81188197	81188197	+	Silent	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	4	81188197	81188197	C	T	SNP	FGF5	ENST00000312465	human	ensembl	74_37	+1	known	silent	c.219	p.G73	1.000	NULL	pfam_Fibroblast_GF_fam,superfamily_Cytokine_IL1-like,smart_Fibroblast_GF_fam,prints_Fibroblast_GF_fam,prints_IL-1_fam/FGF_fam	-	no_errors	FGF5	HGNC	ENSG00000138675	tier1	-	-	78	0	0.00	59	23	28.05
FLYWCH2	0	genome.wustl.edu	37	16	2949270	2949270	+	RNA	DEL	T	T	-			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	16	2949270	2949270	T	-	DEL	FLYWCH2	ENST00000572786	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.000	-	-	-	no_errors	FLYWCH2	HGNC	ENSG00000162076	tier1			24	0	0.00	30	5	14.29
FREM2	0	genome.wustl.edu	37	13	39263873	39263873	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	13	39263873	39263873	C	G	SNP	FREM2	ENST00000280481	human	ensembl	74_37	+1	known	missense	c.2392	p.R798G	0.945	NULL	pfam_Calx_beta,superfamily_Cadherin-like,smart_Calx_beta	-	no_errors	FREM2	HGNC	ENSG00000150893	tier1	-	-	55	0	0.00	38	17	30.91
GALP	0	genome.wustl.edu	37	19	56694564	56694564	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	56694564	56694564	C	T	SNP	GALP	ENST00000357330	human	ensembl	74_37	+1	known	missense	c.278	p.A93V	0.021	NULL	pfam_Galanin	-	no_errors	GALP	HGNC	ENSG00000197487	tier1	-	-	71	0	0.00	68	4	5.56
GNAS	0	genome.wustl.edu	37	20	57484444	57484444	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	20	57484444	57484444	G	C	SNP	GNAS	ENST00000354359	human	ensembl	74_37	+1	known	missense	c.628	p.E210Q	1.000	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Gprotein_alpha_su,prints_Gprotein_alpha_su	pfam_Gprotein_alpha_su,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,superfamily_GproteinA_insert,smart_Gprotein_alpha_su,prints_Gprotein_alpha_S,prints_Gprotein_alpha_su	-	no_errors	GNAS	HGNC	ENSG00000087460	tier1	-	-	88	0	0.00	84	30	26.32
GON4L	0	genome.wustl.edu	37	1	155740961	155740961	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	155740961	155740961	T	A	SNP	GON4L	ENST00000368331	human	ensembl	74_37	-1	known	missense	c.2543	p.N848I	0.996	NULL	pfam_PAH,superfamily_PAH,superfamily_Homeodomain-like,pfscan_Myb-like_dom	-	no_errors	GON4L	HGNC	ENSG00000116580	tier1	-	-	103	0	0.00	116	65	35.91
HERC1	0	genome.wustl.edu	37	15	64026961	64026961	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	15	64026961	64026961	G	A	SNP	HERC1	ENST00000443617	human	ensembl	74_37	-1	known	nonsense	c.2608	p.Q870*	1.000	NULL	pfam_Reg_chr_condens,pfam_HECT,pfam_WD40_repeat,pfam_SPRY_rcpt,superfamily_RCC1/BLIP-II,superfamily_HECT,superfamily_WD40_repeat_dom,superfamily_ConA-like_lec_gl_sf,superfamily_UBA-like,superfamily_ARM-type_fold,smart_SPla/RYanodine_receptor_subgr,smart_WD40_repeat,smart_HECT,pfscan_B30.2/SPRY,pfscan_HECT,pfscan_Reg_chr_condens,pfscan_WD40_repeat,pfscan_WD40_repeat_dom,prints_Reg_chr_condens	-	no_errors	HERC1	HGNC	ENSG00000103657	tier1	-	-	68	0	0.00	95	22	18.80
HERC3	0	genome.wustl.edu	37	4	89571101	89571101	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	4	89571101	89571101	G	A	SNP	HERC3	ENST00000264345	human	ensembl	74_37	+1	known	missense	c.337	p.D113N	1.000	pfam_Reg_chr_condens,superfamily_RCC1/BLIP-II,pfscan_Reg_chr_condens,prints_Reg_chr_condens	pfam_Reg_chr_condens,pfam_HECT,superfamily_HECT,superfamily_RCC1/BLIP-II,smart_HECT,pfscan_HECT,pfscan_Reg_chr_condens,prints_Reg_chr_condens	-	no_errors	HERC3	HGNC	ENSG00000138641	tier1	-	-	52	0	0.00	49	29	37.18
HGS	0	genome.wustl.edu	37	17	79660958	79660958	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	17	79660958	79660958	C	T	SNP	HGS	ENST00000329138	human	ensembl	74_37	+1	known	missense	c.899	p.S300L	0.992	pirsf_Ubi-bd_Hrs_VPS27	pfam_VHS,pfam_HRS_helical,pfam_Znf_FYVE,superfamily_ENTH_VHS,superfamily_Znf_FYVE_PHD,smart_VHS_subgr,smart_Znf_FYVE,pirsf_Ubi-bd_Hrs_VPS27,pfscan_Ubiquitin-int_motif,pfscan_VHS,pfscan_Znf_FYVE-rel	-	no_errors	HGS	HGNC	ENSG00000185359	tier1	-	-	31	0	0.00	31	10	24.39
HS6ST3	0	genome.wustl.edu	37	13	97485218	97485218	+	Silent	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	13	97485218	97485218	C	T	SNP	HS6ST3	ENST00000376705	human	ensembl	74_37	+1	known	silent	c.1182	p.R394	0.953	pfam_Sulfotransferase	pfam_Sulfotransferase,superfamily_P-loop_NTPase	-	no_errors	HS6ST3	HGNC	ENSG00000185352	tier1	-	-	33	0	0.00	26	12	31.58
IER5	0	genome.wustl.edu	37	1	181058181	181058181	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	181058181	181058181	T	A	SNP	IER5	ENST00000367577	human	ensembl	74_37	+1	known	missense	c.143	p.L48Q	1.000	pfam_IER	pfam_IER	-	no_errors	IER5	HGNC	ENSG00000162783	tier1	-	-	24	0	0.00	31	25	44.64
IFNGR2	0	genome.wustl.edu	37	21	34787211	34787211	+	Silent	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	21	34787211	34787211	G	T	SNP	IFNGR2	ENST00000290219	human	ensembl	74_37	+1	known	silent	c.90	p.L30	0.994	superfamily_Fibronectin_type3	pfam_Interferon_alpha/beta_rcpt_bsu,pfam_Fibronectin_type3,superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	IFNGR2	HGNC	ENSG00000159128	tier1	-	-	40	0	0.00	13	14	51.85
IKBKE	0	genome.wustl.edu	37	1	206648350	206648350	+	RNA	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	206648350	206648350	C	T	SNP	IKBKE	ENST00000463979	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	IKBKE	HGNC	ENSG00000143466	tier1	-	-	22	0	0.00	25	9	26.47
IL17RA	0	genome.wustl.edu	37	22	17586491	17586491	+	Silent	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	22	17586491	17586491	G	A	SNP	IL17RA	ENST00000319363	human	ensembl	74_37	+1	known	silent	c.942	p.P314	0.289	NULL	pfam_SEFIR	-	no_errors	IL17RA	HGNC	ENSG00000177663				36	0	0.00	33	2	5.71
IRF9	0	genome.wustl.edu	37	14	24633132	24633134	+	In_Frame_Del	DEL	AGC	AGC	-			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	AGC	AGC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	14	24633132	24633134	AGC	-	DEL	IRF9	ENST00000396864	human	ensembl	74_37	+1	known	in_frame_del	c.541_543	p.S184in_frame_del	0.064:0.076:0.081	NULL	pfam_Interferon_reg_fact_DNA-bd_dom,pfam_Interferon_reg_factor-3,superfamily_SMAD_FHA_domain,smart_Interferon_reg_fact_DNA-bd_dom,prints_Interferon_reg_fact_DNA-bd_dom	-	no_errors	IRF9	HGNC	ENSG00000213928	tier1			31	0	0.00	34	2	5.56
ISG20	0	genome.wustl.edu	37	15	89195433	89195433	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	15	89195433	89195433	C	G	SNP	ISG20	ENST00000306072	human	ensembl	74_37	+1	known	missense	c.321	p.I107M	0.943	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	pfam_Exonuclease_RNaseT/DNA_pol3,superfamily_RNaseH-like_dom,smart_Exonuclease	-	no_errors	ISG20	HGNC	ENSG00000172183	tier1	-	-	40	0	0.00	66	12	15.38
KALRN	0	genome.wustl.edu	37	3	124303670	124303670	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	3	124303670	124303670	T	C	SNP	KALRN	ENST00000291478	human	ensembl	74_37	+1	known	missense	c.2	p.M1T	1.000	NULL	pfam_Prot_kinase_dom,pfam_DH-domain,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Ig_V-set,pfam_Immunoglobulin,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Ig_sub,smart_Ig_sub2,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	KALRN	HGNC	ENSG00000160145	tier1	-	-	18	0	0.00	25	8	24.24
KIAA1467	0	genome.wustl.edu	37	12	13211414	13211414	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	12	13211414	13211414	G	A	SNP	KIAA1467	ENST00000197268	human	ensembl	74_37	+1	known	missense	c.463	p.D155N	1.000	superfamily_Quinonprotein_ADH-like_supfam	superfamily_Quinonprotein_ADH-like_supfam	-	no_errors	KIAA1467	HGNC	ENSG00000084444	tier1	-	-	99	0	0.00	70	26	27.08
KLHDC2	0	genome.wustl.edu	37	14	50244592	50244592	+	Silent	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	14	50244592	50244592	G	A	SNP	KLHDC2	ENST00000298307	human	ensembl	74_37	+1	known	silent	c.387	p.V129	0.959	NULL	pfam_Kelch_2	-	no_errors	KLHDC2	HGNC	ENSG00000165516	tier1	-	-	46	0	0.00	33	19	36.54
KLK5	0	genome.wustl.edu	37	19	51451943	51451943	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	51451943	51451943	C	T	SNP	KLK5	ENST00000336334	human	ensembl	74_37	-1	known	missense	c.679	p.D227N	0.000	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	KLK5	HGNC	ENSG00000167754	tier1	-	-	22	0	0.00	20	11	35.48
KMT2A	0	genome.wustl.edu	37	11	118392772	118392772	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	11	118392772	118392772	G	A	SNP	KMT2A	ENST00000389506	human	ensembl	74_37	+1	known	missense	c.11795	p.R3932H	1.000	pfam_SET_dom,smart_SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom	pfam_SET_dom,pfam_FYrich_C,pfam_Znf_PHD-finger,pfam_FYrich_N,pfam_Znf_CXXC,superfamily_Znf_FYVE_PHD,superfamily_Bromodomain,smart_Znf_PHD,smart_Bromodomain,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pirsf_MeTrfase_trithorax,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_PHD-finger,pfscan_Znf_CXXC,pfscan_Bromodomain	-	no_errors	KMT2A	HGNC	ENSG00000118058	tier1	-	-	51	0	0.00	19	19	50.00
KMT2B	0	genome.wustl.edu	37	19	36212415	36212415	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	36212415	36212415	C	T	SNP	KMT2B	ENST00000341701	human	ensembl	74_37	+1	known	missense	c.1733	p.T578M	0.003	NULL	NULL	-	no_errors	KMT2B	Uniprot_gn	ENSG00000272333	tier1	-	-	133	0	0.00	110	13	10.57
KMT2C	0	genome.wustl.edu	37	7	151878602	151878602	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	7	151878602	151878602	C	A	SNP	KMT2C	ENST00000355193	human	ensembl	74_37	-1	known	missense	c.6343	p.A2115S	1.000	NULL	pfam_Znf_PHD-finger,pfam_SET_dom,pfam_FYrich_C,pfam_FYrich_N,superfamily_Znf_FYVE_PHD,superfamily_HMG_box_dom,smart_Znf_PHD,smart_Znf_RING,smart_HMG_box_dom,smart_FYrich_N,smart_FYrich_C,smart_SET_dom,smart_Post-SET_dom,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_Znf_DHHC_palmitoyltrfase,pfscan_Znf_PHD-finger,pfscan_Znf_RING	-	no_errors	KMT2C	HGNC	ENSG00000055609	tier1	-	-	44	0	0.00	20	17	45.95
KRI1	0	genome.wustl.edu	37	19	10673510	10673510	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	10673510	10673510	G	A	SNP	KRI1	ENST00000312962	human	ensembl	74_37	-1	known	missense	c.296	p.S99L	0.031	NULL	pfam_KRR1-interact_protein_1	-	no_errors	KRI1	HGNC	ENSG00000129347	tier1	-	-	47	0	0.00	45	14	23.73
KRT6A	0	genome.wustl.edu	37	12	52881551	52881551	+	Missense_Mutation	SNP	T	T	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	12	52881551	52881551	T	G	SNP	KRT6A	ENST00000330722	human	ensembl	74_37	-1	known	missense	c.1648	p.K550Q	0.810	NULL	pfam_IF,superfamily_Prefoldin,prints_Keratin_II	-	no_errors	KRT6A	HGNC	ENSG00000205420				48	0	0.00	60	4	6.25
LAMA5	0	genome.wustl.edu	37	20	60912751	60912751	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	20	60912751	60912751	C	T	SNP	LAMA5	ENST00000252999	human	ensembl	74_37	-1	known	missense	c.2059	p.A687T	0.000	pfam_EGF_laminin,smart_EGF_laminin,smart_EG-like_dom,pfscan_EGF_laminin	pfam_EGF_laminin,pfam_Laminin_I,pfam_Laminin_G,pfam_Laminin_N,pfam_Laminin_II,pfam_Laminin_B_type_IV,superfamily_ConA-like_lec_gl_sf,superfamily_Galactose-bd-like,smart_Laminin_N,smart_EGF_laminin,smart_EG-like_dom,smart_Laminin_B_subgr,smart_Laminin_G,pfscan_Laminin_B_type_IV,pfscan_EGF_laminin,pfscan_Laminin_G,pfscan_Laminin_N,pfscan_TNFR/NGFR_Cys_rich_reg	-	no_errors	LAMA5	HGNC	ENSG00000130702	tier1	-	-	41	0	0.00	35	5	12.50
LCT	0	genome.wustl.edu	37	2	136564749	136564749	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	2	136564749	136564749	G	T	SNP	LCT	ENST00000264162	human	ensembl	74_37	-1	known	nonsense	c.4122	p.Y1374*	0.786	superfamily_Glycoside_hydrolase_SF	pfam_Glyco_hydro_1,superfamily_Glycoside_hydrolase_SF,prints_Glyco_hydro_1	-	no_errors	LCT	HGNC	ENSG00000115850	tier1	-	-	59	0	0.00	71	4	5.33
LGR6	0	genome.wustl.edu	37	1	202287572	202287572	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	202287572	202287572	C	T	SNP	LGR6	ENST00000367278	human	ensembl	74_37	+1	known	missense	c.2141	p.S714F	1.000	pfam_GPCR_Rhodpsn,prints_Gphrmn_rcpt_fam	pfam_Leu-rich_rpt,pfam_GPCR_Rhodpsn,pfam_LRR-contain_N,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,prints_Gphrmn_rcpt_fam,prints_GPCR_Rhodpsn	-	no_errors	LGR6	HGNC	ENSG00000133067	tier1	-	-	27	0	0.00	32	17	34.69
LINC00969	0	genome.wustl.edu	37	3	195428437	195428437	+	RNA	SNP	G	G	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	3	195428437	195428437	G	C	SNP	LINC00969	ENST00000445707	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	LINC00969	HGNC	ENSG00000242086	tier1	-	-	39	0	0.00	84	5	5.62
LINC01020	0	genome.wustl.edu	37	5	5057902	5057902	+	RNA	SNP	T	T	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	5	5057902	5057902	T	C	SNP	LINC01020	ENST00000507599	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC01020	HGNC	ENSG00000215231	tier1	-	-	80	0	0.00	51	29	35.80
LOC100293748	0	genome.wustl.edu	37	1	149262062	149262062	+	RNA	SNP	A	A	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	149262062	149262062	A	G	SNP	LOC100293748	ENST00000325963	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	RP11-403I13.4	Clone_based_vega_gene	ENSG00000223779	tier1	-	-	59	0	0.00	73	13	15.12
LOC100996870	0	genome.wustl.edu	37	9	66466650	66466650	+	RNA	SNP	G	G	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	9	66466650	66466650	G	C	SNP	LOC100996870	ENST00000424345	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.105	-	-	-	no_errors	RP11-262H14.1	Clone_based_vega_gene	ENSG00000238113	tier1	rs1133399	-	12	0	0.00	12	4	25.00
LOC101927209	0	genome.wustl.edu	37	1	142621403	142621403	+	RNA	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	142621403	142621403	G	T	SNP	LOC101927209	ENST00000412092	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.074	-	-	-	no_errors	RP11-417J8.3	Clone_based_vega_gene	ENSG00000230880	tier1	rs2992190	-	17	0	0.00	19	7	26.92
LOC101927209	0	genome.wustl.edu	37	1	142670579	142670579	+	RNA	SNP	T	T	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	142670579	142670579	T	C	SNP	LOC101927209	ENST00000400755	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.282	-	-	-	no_errors	RP11-417J8.3	Clone_based_vega_gene	ENSG00000230880	tier1	rs200336596	-	29	0	0.00	21	5	19.23
LOC101927345	0	genome.wustl.edu	37	1	143394039	143394039	+	RNA	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	143394039	143394039	G	A	SNP	LOC101927345	ENST00000415543	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.010	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261	tier1	-	-	278	0	0.00	301	47	13.47
LOC146880	0	genome.wustl.edu	37	17	62777687	62777687	+	RNA	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	17	62777687	62777687	C	A	SNP	LOC146880	ENST00000400873	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.999	-	-	-	no_errors	hsa-mir-6080	miRBase	ENSG00000215769	tier1	-	-	13	0	0.00	13	18	58.06
LRIG1	0	genome.wustl.edu	37	3	66436586	66436586	+	Silent	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	3	66436586	66436586	G	A	SNP	LRIG1	ENST00000273261	human	ensembl	74_37	-1	known	silent	c.1608	p.V536	0.994	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	pfam_Ig_I-set,pfam_Leu-rich_rpt,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Cys-rich_flank_reg_C,smart_LRR-contain_N,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	LRIG1	HGNC	ENSG00000144749	tier1	-	-	73	0	0.00	12	13	52.00
LRRC37A6P	0	genome.wustl.edu	37	10	27538198	27538198	+	RNA	SNP	C	C	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	10	27538198	27538198	C	G	SNP	LRRC37A6P	ENST00000284414	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.013	-	-	-	no_errors	LRRC37A6P	HGNC	ENSG00000230445	tier1	-	-	110	0	0.00	95	41	30.15
MARK1	0	genome.wustl.edu	37	1	220835505	220835505	+	Silent	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	220835505	220835505	G	A	SNP	MARK1	ENST00000366917	human	ensembl	74_37	+1	known	silent	c.2385	p.L795	1.000	pfam_KA1_dom,superfamily_KA1/Ssp2_C	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_KA1_dom,superfamily_Kinase-like_dom,superfamily_KA1/Ssp2_C,superfamily_UBA-like,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,smart_UBA/transl_elong_EF1B_N_euk,prints_Ser-Thr/Tyr_kinase_cat_dom,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Prot_kinase_dom	-	no_errors	MARK1	HGNC	ENSG00000116141				21	0	0.00	28	2	6.67
MIR663B	0	genome.wustl.edu	37	2	133014554	133014554	+	RNA	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	2	133014554	133014554	G	T	SNP	MIR663B	ENST00000408361	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.025	-	-	-	no_errors	MIR663B	HGNC	ENSG00000221288				29	0	0.00	45	7	13.46
MRGPRF	0	genome.wustl.edu	37	11	68773294	68773294	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	11	68773294	68773294	C	T	SNP	MRGPRF	ENST00000309099	human	ensembl	74_37	-1	known	missense	c.484	p.V162M	0.509	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	-	no_errors	MRGPRF	HGNC	ENSG00000172935	tier1	-	-	44	0	0.00	188	16	7.84
MRP63	0	genome.wustl.edu	37	13	21751269	21751269	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	13	21751269	21751269	G	C	SNP	MRP63	ENST00000309594	human	ensembl	74_37	+1	known	missense	c.214	p.E72Q	0.339	pirsf_Ribosomal_MRP63_mit	pirsf_Ribosomal_MRP63_mit	-	no_errors	MRP63	HGNC	ENSG00000173141	tier1	-	-	43	0	0.00	37	17	31.48
MUC4	0	genome.wustl.edu	37	3	195506118	195506118	+	Silent	SNP	C	C	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	3	195506118	195506118	C	G	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	silent	c.12333	p.T4111	0.000	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	-	-	40	0	0.00	37	12	24.49
MYH7B	0	genome.wustl.edu	37	20	33568835	33568835	+	Splice_Site	SNP	G	G	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	20	33568835	33568835	G	C	SNP	MYH7B	ENST00000481922	human	ensembl	74_37	+1	known	splice_site	c.NULL	NULL	1.000	-	-	-	no_errors	MYH7B	HGNC	ENSG00000078814	tier1	-	-	50	0	0.00	55	14	20.29
NAGLU	0	genome.wustl.edu	37	17	40695400	40695400	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	17	40695400	40695400	C	T	SNP	NAGLU	ENST00000225927	human	ensembl	74_37	+1	known	missense	c.1376	p.A459V	0.977	pfam_NAGLU_tim-barrel	pfam_NAGLU_tim-barrel,superfamily_Glycoside_hydrolase_SF	-	no_errors	NAGLU	HGNC	ENSG00000108784				33	0	0.00	60	4	6.25
NARF	0	genome.wustl.edu	37	17	80445912	80445912	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	17	80445912	80445912	A	T	SNP	NARF	ENST00000309794	human	ensembl	74_37	+1	known	missense	c.1250	p.H417L	0.005	pfam_Fe_hydrogenase_ssu-like,superfamily_Fe_hydrogenase,smart_Fe_hydrogenase_ssu-like	pfam_Fe_hydrogenase_lsu_C,pfam_Fe_hydrogenase_ssu-like,superfamily_Fe_hydrogenase,smart_Fe_hydrogenase_ssu-like	-	no_errors	NARF	HGNC	ENSG00000141562	tier1	-	-	24	0	0.00	26	6	18.75
NEFH	0	genome.wustl.edu	37	22	29879448	29879448	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	22	29879448	29879448	G	A	SNP	NEFH	ENST00000310624	human	ensembl	74_37	+1	known	missense	c.968	p.R323H	1.000	pfam_IF	pfam_IF,pfam_DUF1388	-	no_errors	NEFH	HGNC	ENSG00000100285	tier1	-	-	21	0	0.00	22	10	31.25
NOTCH3	0	genome.wustl.edu	37	19	15292532	15292532	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	15292532	15292532	G	A	SNP	NOTCH3	ENST00000263388	human	ensembl	74_37	-1	known	nonsense	c.2647	p.R883*	0.993	pirsf_Notch,pfam_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pirsf_Notch,pfam_EG-like_dom,pfam_EGF-like_Ca-bd_dom,pfam_Ankyrin_rpt,pfam_Notch_dom,pfam_Notch_NODP_dom,pfam_Notch_NOD_dom,pfam_EGF_extracell,pfam_DUF3454_notch,superfamily_Ankyrin_rpt-contain_dom,superfamily_Notch_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Notch_dom,smart_Ankyrin_rpt,prints_Notch_3,prints_Notch_dom,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_EG-like_dom,pfscan_Notch_dom	-	no_errors	NOTCH3	HGNC	ENSG00000074181	tier1	-	-	141	0	0.00	116	56	32.37
NPEPPS	0	genome.wustl.edu	37	17	45668212	45668212	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	17	45668212	45668212	G	A	SNP	NPEPPS	ENST00000322157	human	ensembl	74_37	+1	known	missense	c.1225	p.E409K	1.000	pfam_Peptidase_M1_N	pfam_Peptidase_M1_N,prints_Peptidase_M1_N	-	no_errors	NPEPPS	HGNC	ENSG00000141279	tier1	-	-	174	0	0.00	182	25	12.08
NPHP3	0	genome.wustl.edu	37	3	132415603	132415604	+	Frame_Shift_Ins	INS	-	-	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	3	132415603	132415604	-	A	INS	NPHP3	ENST00000337331	human	ensembl	74_37	-1	known	frame_shift_ins	c.2143_2142	p.V714fs	1.000:1.000	superfamily_P-loop_NTPase	pfam_TPR_1,pfam_TPR-3,superfamily_P-loop_NTPase,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	NPHP3	HGNC	ENSG00000113971	tier1			48	0	0.00	52	17	24.64
NR2E1	0	genome.wustl.edu	37	6	108497939	108497939	+	Silent	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	6	108497939	108497939	C	A	SNP	NR2E1	ENST00000368986	human	ensembl	74_37	+1	known	silent	c.492	p.P164	1.000	superfamily_Nucl_hormone_rcpt_ligand-bd	pfam_Nucl_hrmn_rcpt_lig-bd_core,pfam_Znf_hrmn_rcpt,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Znf_hrmn_rcpt,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt,prints_Znf_hrmn_rcpt,pfscan_Znf_hrmn_rcpt	-	no_errors	NR2E1	HGNC	ENSG00000112333	tier1	-	-	12	0	0.00	18	6	25.00
NSMAF	0	genome.wustl.edu	37	8	59506838	59506838	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	8	59506838	59506838	C	A	SNP	NSMAF	ENST00000427130	human	ensembl	74_37	-1	known	missense	c.1997	p.G666V	1.000	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat_dom	pfam_BEACH_dom,pfam_WD40_repeat,pfam_GRAM,superfamily_BEACH_dom,superfamily_WD40_repeat_dom,smart_GRAM,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	NSMAF	HGNC	ENSG00000035681	tier1	-	-	78	0	0.00	105	23	17.97
NT5C1B	0	genome.wustl.edu	37	2	18768420	18768420	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	2	18768420	18768420	G	T	SNP	NT5C1B	ENST00000359846	human	ensembl	74_37	-1	known	missense	c.140	p.P47Q	1.000	NULL	pfam_5-nucleotidase	-	no_errors	NT5C1B	HGNC	ENSG00000185013	tier1	-	-	22	0	0.00	5	12	70.59
NXPE2	0	genome.wustl.edu	37	11	114577254	114577254	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	11	114577254	114577254	G	A	SNP	NXPE2	ENST00000389586	human	ensembl	74_37	+1	known	missense	c.1282	p.E428K	1.000	NULL	pfam_NXPH/NXPE,superfamily_Ig_E-set	-	no_errors	NXPE2	HGNC	ENSG00000204361	tier1	-	-	88	0	0.00	33	27	45.00
OBSCN	0	genome.wustl.edu	37	1	228560180	228560180	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	228560180	228560180	C	T	SNP	OBSCN	ENST00000422127	human	ensembl	74_37	+1	known	missense	c.21701	p.S7234L	0.000	NULL	pfam_Ig_I-set,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Fibronectin_type3,pfam_DH-domain,pfam_IQ_motif_EF-hand-BS,superfamily_Kinase-like_dom,superfamily_DH-domain,superfamily_Fibronectin_type3,superfamily_SH3_domain,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_IQ_motif_EF-hand-BS,smart_DH-domain,smart_Pleckstrin_homology,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_IQ_motif_EF-hand-BS,pfscan_Pleckstrin_homology,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom,pfscan_DH-domain	-	no_errors	OBSCN	HGNC	ENSG00000154358	tier1	-	-	64	0	0.00	47	30	38.96
OLFM1	0	genome.wustl.edu	37	9	137968928	137968928	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	9	137968928	137968928	G	T	SNP	OLFM1	ENST00000371799	human	ensembl	74_37	+1	putative	missense	c.367	p.G123C	0.001	NULL	NULL	-	no_errors	OLFM1	HGNC	ENSG00000130558	tier1	-	-	68	0	0.00	11	66	85.71
OR2F2	0	genome.wustl.edu	37	7	143632543	143632543	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	7	143632543	143632543	A	T	SNP	OR2F2	ENST00000408955	human	ensembl	74_37	+1	known	missense	c.218	p.Y73F	0.710	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR2F2	HGNC	ENSG00000221910	tier1	-	-	53	0	0.00	15	22	59.46
OR2J1	0	genome.wustl.edu	37	6	29069380	29069380	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	6	29069380	29069380	G	A	SNP	OR2J1	ENST00000377171	human	ensembl	74_37	+1	known	missense	c.661	p.A221T	0.003	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,prints_Olfact_rcpt,prints_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	-	no_errors	OR2J1	HGNC	ENSG00000204702	tier1	-	-	56	0	0.00	47	29	38.16
OR4N2	0	genome.wustl.edu	37	14	20296519	20296519	+	Silent	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	14	20296519	20296519	G	A	SNP	OR4N2	ENST00000315947	human	ensembl	74_37	+1	known	silent	c.912	p.K304	0.000	NULL	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4N2	HGNC	ENSG00000176294				43	0	0.00	63	4	5.97
OR4S2	0	genome.wustl.edu	37	11	55418727	55418727	+	Frame_Shift_Del	DEL	G	G	-			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	11	55418727	55418727	G	-	DEL	OR4S2	ENST00000312422	human	ensembl	74_37	+1	known	frame_shift_del	c.348	p.A117fs	1.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR4S2	HGNC	ENSG00000174982	tier1			33	0	0.00	9	22	70.97
OR5T1	0	genome.wustl.edu	37	11	56043399	56043399	+	Silent	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	11	56043399	56043399	C	A	SNP	OR5T1	ENST00000313033	human	ensembl	74_37	+1	known	silent	c.285	p.V95	0.021	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR5T1	HGNC	ENSG00000181698	tier1	-	-	61	0	0.00	49	26	34.67
OR6S1	0	genome.wustl.edu	37	14	21109503	21109503	+	Silent	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	14	21109503	21109503	C	T	SNP	OR6S1	ENST00000320704	human	ensembl	74_37	-1	known	silent	c.348	p.L116	0.428	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR6S1	HGNC	ENSG00000181803	tier1	-	-	43	0	0.00	38	6	13.64
OVCH1	0	genome.wustl.edu	37	12	29626014	29626014	+	Silent	SNP	T	T	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	12	29626014	29626014	T	C	SNP	OVCH1	ENST00000318184	human	ensembl	74_37	-1	known	silent	c.1623	p.P541	0.000	NULL	pfam_Peptidase_S1,pfam_CUB_dom,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,superfamily_CUB_dom,smart_Peptidase_S1,smart_CUB_dom,pfscan_CUB_dom,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	OVCH1	HGNC	ENSG00000187950	tier1	-	-	43	0	0.00	34	16	32.00
PDE4DIP	0	genome.wustl.edu	37	1	144916732	144916732	+	Silent	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	144916732	144916732	C	T	SNP	PDE4DIP	ENST00000369356	human	ensembl	74_37	-1	known	silent	c.1623	p.L541	1.000	NULL	pfam_Spindle_assoc,superfamily_ARM-type_fold	-	no_errors	PDE4DIP	HGNC	ENSG00000178104	tier1	-	-	74	0	0.00	87	25	22.32
PDS5B	0	genome.wustl.edu	37	13	33309450	33309450	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	13	33309450	33309450	C	T	SNP	PDS5B	ENST00000315596	human	ensembl	74_37	+1	known	missense	c.2389	p.L797F	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	PDS5B	HGNC	ENSG00000083642	tier1	-	-	63	0	0.00	30	21	41.18
PDS5B	0	genome.wustl.edu	37	13	33309466	33309466	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	13	33309466	33309466	G	T	SNP	PDS5B	ENST00000315596	human	ensembl	74_37	+1	known	missense	c.2405	p.R802L	1.000	superfamily_ARM-type_fold	superfamily_ARM-type_fold	-	no_errors	PDS5B	HGNC	ENSG00000083642				51	0	0.00	49	3	5.77
PIEZO2	0	genome.wustl.edu	37	18	10794790	10794790	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	18	10794790	10794790	G	T	SNP	PIEZO2	ENST00000582913	human	ensembl	74_37	-1	known	missense	c.1738	p.P580T	0.975	NULL	NULL	-	no_errors	PIEZO2	HGNC	ENSG00000154864	tier1	-	-	61	0	0.00	66	4	5.71
PIGB	0	genome.wustl.edu	37	15	55621954	55621954	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	15	55621954	55621954	G	T	SNP	PIGB	ENST00000164305	human	ensembl	74_37	+1	known	missense	c.555	p.W185C	1.000	pfam_GPI_mannosylTrfase	pfam_GPI_mannosylTrfase	-	no_errors	PIGB	HGNC	ENSG00000069943	tier1	-	-	59	0	0.00	101	18	15.13
PKP2	0	genome.wustl.edu	37	12	32977060	32977060	+	Silent	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	12	32977060	32977060	C	T	SNP	PKP2	ENST00000070846	human	ensembl	74_37	-1	known	silent	c.1725	p.A575	0.980	superfamily_ARM-type_fold,smart_Armadillo	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo	-	no_errors	PKP2	HGNC	ENSG00000057294	tier1	-	-	54	0	0.00	63	10	13.70
PLEKHG3	0	genome.wustl.edu	37	14	65197822	65197822	+	Missense_Mutation	SNP	A	A	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	14	65197822	65197822	A	C	SNP	PLEKHG3	ENST00000394691	human	ensembl	74_37	+1	known	missense	c.784	p.M262L	1.000	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,pfscan_DH-domain	pfam_DH-domain,pfam_Pleckstrin_homology,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG3	HGNC	ENSG00000126822	tier1	-	-	36	0	0.00	32	21	39.62
PLEKHG6	0	genome.wustl.edu	37	12	6436429	6436429	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	12	6436429	6436429	G	T	SNP	PLEKHG6	ENST00000011684	human	ensembl	74_37	+1	known	missense	c.1680	p.E560D	0.120	NULL	pfam_DH-domain,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,pfscan_Pleckstrin_homology,pfscan_DH-domain	-	no_errors	PLEKHG6	HGNC	ENSG00000008323	tier1	-	-	46	0	0.00	49	4	7.55
POLA2	0	genome.wustl.edu	37	11	65063037	65063037	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	11	65063037	65063037	G	T	SNP	POLA2	ENST00000265465	human	ensembl	74_37	+1	known	missense	c.1487	p.S496I	1.000	pfam_DNA_pol_alpha/epsilon_bsu,pirsf_DNA_pol_alpha_bsu	pfam_Pol_alpha_B_N,pfam_DNA_pol_alpha/epsilon_bsu,pirsf_DNA_pol_alpha_bsu	-	no_errors	POLA2	HGNC	ENSG00000014138	tier1	-	-	27	0	0.00	31	4	11.43
PPHLN1	0	genome.wustl.edu	37	12	42778782	42778782	+	Silent	SNP	A	A	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	12	42778782	42778782	A	G	SNP	PPHLN1	ENST00000395568	human	ensembl	74_37	+1	known	silent	c.552	p.E184	1.000	NULL	NULL	-	no_errors	PPHLN1	HGNC	ENSG00000134283	tier1	-	-	83	0	0.00	76	24	24.00
PPP2R1A	0	genome.wustl.edu	37	19	52724234	52724234	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	52724234	52724234	T	C	SNP	PPP2R1A	ENST00000322088	human	ensembl	74_37	+1	known	missense	c.1366	p.Y456H	1.000	superfamily_ARM-type_fold	pfam_HEAT,superfamily_ARM-type_fold,pfscan_HEAT_type_2	-	no_errors	PPP2R1A	HGNC	ENSG00000105568	tier1	-	-	34	0	0.00	22	15	40.54
PRTN3	0	genome.wustl.edu	37	19	846367	846367	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	846367	846367	G	A	SNP	PRTN3	ENST00000234347	human	ensembl	74_37	+1	known	missense	c.590	p.G197D	0.580	pfam_Peptidase_S1,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	pfam_Peptidase_S1,pfam_Peptidase_S1A_nudel,superfamily_Trypsin-like_Pept_dom,smart_Peptidase_S1,pfscan_Peptidase_S1,prints_Peptidase_S1A	-	no_errors	PRTN3	HGNC	ENSG00000196415	tier1	-	-	51	0	0.00	24	21	46.67
PYGB	0	genome.wustl.edu	37	20	25277028	25277028	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	20	25277028	25277028	A	G	SNP	PYGB	ENST00000216962	human	ensembl	74_37	+1	known	missense	c.2402	p.K801R	1.000	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	pfam_Glyco_trans_35,pirsf_Glyco_trans_35,tigrfam_Glycg_phsphrylas	-	no_errors	PYGB	HGNC	ENSG00000100994	tier1	-	-	67	0	0.00	71	21	22.83
PYGO1	0	genome.wustl.edu	37	15	55839259	55839259	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	15	55839259	55839259	G	T	SNP	PYGO1	ENST00000302000	human	ensembl	74_37	-1	known	missense	c.222	p.D74E	1.000	NULL	pfam_Znf_PHD-finger,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,pfscan_Znf_PHD-finger	-	no_errors	PYGO1	HGNC	ENSG00000171016				49	0	0.00	63	4	5.97
RAP1GAP2	0	genome.wustl.edu	37	17	2901588	2901588	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	17	2901588	2901588	C	A	SNP	RAP1GAP2	ENST00000254695	human	ensembl	74_37	+1	known	missense	c.1118	p.P373Q	1.000	pfam_Rap_GAP_dom,pfscan_Rap_GAP_dom	pfam_Rap_GAP_dom,pfscan_Rap_GAP_dom	-	no_errors	RAP1GAP2	HGNC	ENSG00000132359	tier1	-	-	44	0	0.00	39	13	25.00
RAPSN	0	genome.wustl.edu	37	11	47460440	47460440	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	11	47460440	47460440	G	T	SNP	RAPSN	ENST00000298854	human	ensembl	74_37	-1	known	missense	c.1009	p.R337S	1.000	NULL	pfam_Rapsyn_myristoylation/link_N,smart_TPR_repeat,smart_Znf_RING,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Znf_RING,prints_Postsynaptic	-	no_errors	RAPSN	HGNC	ENSG00000165917	tier1	-	-	43	0	0.00	28	25	47.17
RICTOR	0	genome.wustl.edu	37	5	38945607	38945607	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	5	38945607	38945607	A	T	SNP	RICTOR	ENST00000296782	human	ensembl	74_37	-1	known	missense	c.4691	p.I1564K	0.925	NULL	superfamily_ARM-type_fold	-	no_errors	RICTOR	HGNC	ENSG00000164327	tier1	-	-	68	0	0.00	43	19	30.65
RNF39	0	genome.wustl.edu	37	6	30041253	30041253	+	Silent	SNP	A	A	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	6	30041253	30041253	A	G	SNP	RNF39	ENST00000244360	human	ensembl	74_37	-1	known	silent	c.570	p.D190	0.507	NULL	pfam_SPRY_rcpt,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	RNF39	HGNC	ENSG00000204618	tier1	-	-	86	0	0.00	74	27	26.73
RP1L1	0	genome.wustl.edu	37	8	10468842	10468842	+	Silent	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	8	10468842	10468842	C	A	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	silent	c.2766	p.L922	0.000	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	-	no_errors	RP1L1	HGNC	ENSG00000183638	tier1	-	-	57	0	0.00	28	42	60.00
RPGRIP1L	0	genome.wustl.edu	37	16	53720465	53720465	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	16	53720465	53720465	C	G	SNP	RPGRIP1L	ENST00000379925	human	ensembl	74_37	-1	known	missense	c.656	p.R219T	0.990	NULL	pfam_DUF3250,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RPGRIP1L	HGNC	ENSG00000103494	tier1	-	-	68	0	0.00	59	34	36.56
RPGRIP1L	0	genome.wustl.edu	37	16	53679899	53679899	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	16	53679899	53679899	G	T	SNP	RPGRIP1L	ENST00000379925	human	ensembl	74_37	-1	known	missense	c.2321	p.P774H	1.000	superfamily_C2_dom	pfam_DUF3250,pfam_C2_dom,superfamily_C2_dom,smart_C2_dom,pfscan_C2_dom	-	no_errors	RPGRIP1L	HGNC	ENSG00000103494				47	0	0.00	46	4	8.00
RTN4R	0	genome.wustl.edu	37	22	20230142	20230142	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	22	20230142	20230142	C	T	SNP	RTN4R	ENST00000043402	human	ensembl	74_37	-1	known	missense	c.514	p.D172N	0.952	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	RTN4R	HGNC	ENSG00000040608				30	0	0.00	23	2	8.00
SCAND2P	0	genome.wustl.edu	37	15	85178634	85178635	+	RNA	INS	-	-	TT			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	15	85178634	85178635	-	TT	INS	SCAND2P	ENST00000427525	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.053:0.188	-	-	-	no_errors	SCAND2P	HGNC	ENSG00000176700	tier1			11	0	0.00	13	4	23.53
SDHAP1	0	genome.wustl.edu	37	3	195717061	195717061	+	RNA	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	3	195717061	195717061	C	A	SNP	SDHAP1	ENST00000413474	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.825	-	-	-	no_errors	SDHAP1	HGNC	ENSG00000185485				9	0	0.00	11	4	26.67
SDHC	0	genome.wustl.edu	37	1	161284244	161284244	+	RNA	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	161284244	161284244	C	T	SNP	SDHC	ENST00000515731	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SDHC	HGNC	ENSG00000143252	tier1	-	-	53	0	0.00	30	4	11.76
SEC31A	0	genome.wustl.edu	37	4	83784392	83784392	+	RNA	SNP	G	G	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	4	83784392	83784392	G	C	SNP	SEC31A	ENST00000436790	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.075	-	-	-	no_errors	SEC31A	HGNC	ENSG00000138674	tier1	-	-	81	0	0.00	82	48	36.92
SEPT12	0	genome.wustl.edu	37	16	4827874	4827874	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	16	4827874	4827874	G	A	SNP	SEPT12	ENST00000268231	human	ensembl	74_37	-1	known	missense	c.1001	p.S334F	0.020	pirsf_Septin	pfam_Cell_div_GTP-bd,pfam_AIG1,superfamily_P-loop_NTPase,pirsf_Septin	-	no_errors	SEPT12	HGNC	ENSG00000140623	tier1	-	-	53	0	0.00	37	23	38.33
SETD2	0	genome.wustl.edu	37	3	47098822	47098822	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	3	47098822	47098822	G	A	SNP	SETD2	ENST00000409792	human	ensembl	74_37	-1	known	missense	c.6452	p.P2151L	1.000	NULL	pfam_SRI,pfam_SET_dom,pfam_WW_dom,superfamily_WW_dom,superfamily_Ferritin-like_SF,smart_AWS,smart_SET_dom,smart_Post-SET_dom,smart_WW_dom,pfscan_AWS,pfscan_SET_dom,pfscan_Post-SET_dom,pfscan_WW_dom	-	no_errors	SETD2	HGNC	ENSG00000181555	tier1	-	-	43	0	0.00	16	26	61.90
SFMBT2	0	genome.wustl.edu	37	10	7214488	7214488	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	10	7214488	7214488	G	A	SNP	SFMBT2	ENST00000361972	human	ensembl	74_37	-1	known	missense	c.2120	p.S707F	0.925	superfamily_ARM-type_fold	pfam_Mbt,pfam_DUF3588,pfam_SAM_type1,pfam_Pointed_dom,superfamily_SAM/pointed,superfamily_ARM-type_fold,smart_Mbt,smart_SAM,pfscan_Mbt	-	no_errors	SFMBT2	HGNC	ENSG00000198879				54	0	0.00	68	4	5.56
SFT2D1	0	genome.wustl.edu	37	6	166733495	166733495	+	RNA	SNP	A	A	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	6	166733495	166733495	A	G	SNP	SFT2D1	ENST00000487841	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SFT2D1	HGNC	ENSG00000198818	tier1	-	-	12	0	0.00	9	12	57.14
SGTB	0	genome.wustl.edu	37	5	65000152	65000152	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	5	65000152	65000152	G	C	SNP	SGTB	ENST00000381007	human	ensembl	74_37	-1	known	missense	c.328	p.Q110E	0.997	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	pfam_TPR_1,pfam_TPR_2,smart_TPR_repeat,pfscan_TPR_repeat,pfscan_TPR-contain_dom	-	no_errors	SGTB	HGNC	ENSG00000197860	tier1	-	-	89	0	0.00	104	52	33.33
SLC17A6	0	genome.wustl.edu	37	11	22360130	22360130	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	11	22360130	22360130	G	C	SNP	SLC17A6	ENST00000263160	human	ensembl	74_37	+1	known	missense	c.51	p.K17N	1.000	NULL	pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom	-	no_errors	SLC17A6	HGNC	ENSG00000091664	tier1	-	-	87	0	0.00	54	21	28.00
SLC35C2	0	genome.wustl.edu	37	20	44978913	44978913	+	RNA	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	20	44978913	44978913	C	A	SNP	SLC35C2	ENST00000493599	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	SLC35C2	HGNC	ENSG00000080189	tier1	-	-	34	0	0.00	37	4	9.76
SLC43A2	0	genome.wustl.edu	37	17	1479963	1479963	+	Silent	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	17	1479963	1479963	G	A	SNP	SLC43A2	ENST00000382147	human	ensembl	74_37	-1	known	silent	c.1488	p.S496	0.852	superfamily_MFS_dom_general_subst_transpt	pfam_MFS,superfamily_MFS_dom_general_subst_transpt	-	no_errors	SLC43A2	HGNC	ENSG00000167703	tier1	rs142934102	-	34	0	0.00	34	14	29.17
SLC4A10	0	genome.wustl.edu	37	2	162757652	162757652	+	RNA	SNP	A	A	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	2	162757652	162757652	A	G	SNP	SLC4A10	ENST00000493021	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.006	-	-	-	no_errors	SLC4A10	HGNC	ENSG00000144290	tier1	-	-	14	0	0.00	15	7	31.82
SLC50A1	0	genome.wustl.edu	37	1	155110819	155110820	+	RNA	INS	-	-	CAG			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	155110819	155110820	-	CAG	INS	SLC50A1	ENST00000368405	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.110:0.111	-	-	-	no_errors	SLC50A1	HGNC	ENSG00000169241	tier1			51	0	0.00	38	21	35.59
SMAD4	0	genome.wustl.edu	37	18	48603032	48603032	+	Nonsense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	18	48603032	48603032	C	T	SNP	SMAD4	ENST00000342988	human	ensembl	74_37	+1	known	nonsense	c.1333	p.R445*	1.000	pfam_SMAD_dom_Dwarfin-type,superfamily_SMAD_FHA_domain,smart_SMAD_dom_Dwarfin-type,pfscan_SMAD_dom_Dwarfin-type	pfam_SMAD_dom_Dwarfin-type,pfam_MAD_homology1_Dwarfin-type,superfamily_SMAD_FHA_domain,superfamily_MAD_homology_MH1,smart_MAD_homology1_Dwarfin-type,smart_SMAD_dom_Dwarfin-type,pfscan_MAD_homology_MH1,pfscan_SMAD_dom_Dwarfin-type	-	no_errors	SMAD4	HGNC	ENSG00000141646	tier1	-	-	71	0	0.00	30	34	53.12
SOAT2	0	genome.wustl.edu	37	12	53497990	53497990	+	Silent	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	12	53497990	53497990	G	A	SNP	SOAT2	ENST00000301466	human	ensembl	74_37	+1	known	silent	c.138	p.E46	1.000	NULL	pfam_MBOAT_fam	-	no_errors	SOAT2	HGNC	ENSG00000167780	tier1	-	-	26	0	0.00	26	16	38.10
SON	0	genome.wustl.edu	37	21	34927209	34927209	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	21	34927209	34927209	G	T	SNP	SON	ENST00000356577	human	ensembl	74_37	+1	known	missense	c.5672	p.R1891L	0.998	NULL	pfam_G_patch_dom,superfamily_WD40_repeat_dom,smart_G_patch_dom,pfscan_G_patch_dom,pfscan_dsRNA-bd_dom	-	no_errors	SON	HGNC	ENSG00000159140				63	0	0.00	37	2	5.13
SPATA31E1	0	genome.wustl.edu	37	9	90503589	90503589	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	9	90503589	90503589	G	C	SNP	SPATA31E1	ENST00000325643	human	ensembl	74_37	+1	known	missense	c.4187	p.R1396T	0.000	NULL	NULL	-	no_errors	SPATA31E1	HGNC	ENSG00000177992				49	0	0.00	74	4	5.13
SPTBN4	0	genome.wustl.edu	37	19	41019376	41019376	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	41019376	41019376	G	A	SNP	SPTBN4	ENST00000352632	human	ensembl	74_37	+1	known	missense	c.2680	p.E894K	1.000	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,smart_Spectrin/alpha-actinin	pirsf_Spectrin_bsu,pfam_Spectrin_repeat,pfam_CH-domain,pfam_Pleckstrin_homology,pfam_CAMSAP_CH,superfamily_CH-domain,smart_CH-domain,smart_Spectrin/alpha-actinin,smart_Pleckstrin_homology,prints_PH_dom-spectrin-type,pfscan_CH-domain,pfscan_Pleckstrin_homology	-	no_errors	SPTBN4	HGNC	ENSG00000160460				11	0	0.00	12	5	29.41
STAG3L5P-PVRIG2P-PILRB	0	genome.wustl.edu	37	7	99943553	99943553	+	RNA	DEL	T	T	-			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	7	99943553	99943553	T	-	DEL	STAG3L5P-PVRIG2P-PILRB	ENST00000310771	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.002	-	-	-	no_errors	STAG3L5P-PVRIG2P-PILRB	HGNC	ENSG00000272752	tier1			31	0	0.00	49	5	9.26
SZT2	0	genome.wustl.edu	37	1	43891189	43891189	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	43891189	43891189	A	T	SNP	SZT2	ENST00000562955	human	ensembl	74_37	+1	known	missense	c.2690	p.E897V	1.000	NULL	NULL	-	no_errors	SZT2	HGNC	ENSG00000198198	tier1	-	-	16	0	0.00	11	5	31.25
TAGAP	0	genome.wustl.edu	37	6	159457656	159457656	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	6	159457656	159457656	C	T	SNP	TAGAP	ENST00000367066	human	ensembl	74_37	-1	known	missense	c.1399	p.A467T	0.000	NULL	pfam_RhoGAP_dom,superfamily_Rho_GTPase_activation_prot,smart_RhoGAP_dom,pfscan_RhoGAP_dom	-	no_errors	TAGAP	HGNC	ENSG00000164691	tier1	-	-	37	0	0.00	41	18	30.51
TAS2R39	0	genome.wustl.edu	37	7	142880943	142880943	+	Frame_Shift_Del	DEL	C	C	-			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	7	142880943	142880943	C	-	DEL	TAS2R39	ENST00000446620	human	ensembl	74_37	+1	known	frame_shift_del	c.432	p.L146fs	0.032	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R39	HGNC	ENSG00000236398	tier1			34	0	0.00	34	4	10.53
TCF7L1	0	genome.wustl.edu	37	2	85361007	85361007	+	Nonsense_Mutation	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	2	85361007	85361007	C	A	SNP	TCF7L1	ENST00000282111	human	ensembl	74_37	+1	known	nonsense	c.200	p.S67*	1.000	pfam_CTNNB1-bd_N	pfam_CTNNB1-bd_N,pfam_HMG_box_dom,superfamily_HMG_box_dom,smart_HMG_box_dom,pfscan_HMG_box_dom	-	no_errors	TCF7L1	HGNC	ENSG00000152284	tier1	-	-	48	0	0.00	38	15	28.30
TEAD4	0	genome.wustl.edu	37	12	3147205	3147205	+	Silent	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	12	3147205	3147205	C	A	SNP	TEAD4	ENST00000359864	human	ensembl	74_37	+1	known	silent	c.969	p.P323	0.016	pfam_TEA/ATTS,pirsf_TEF	pfam_TEA/ATTS,smart_TEA/ATTS,pirsf_TEF,pfscan_TEA/ATTS,prints_TEA/ATTS	-	no_errors	TEAD4	HGNC	ENSG00000197905				30	0	0.00	27	2	6.90
TMC5	0	genome.wustl.edu	37	16	19475199	19475199	+	Silent	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	16	19475199	19475199	C	T	SNP	TMC5	ENST00000396229	human	ensembl	74_37	+1	known	silent	c.1338	p.V446	0.999	NULL	pfam_TMC	-	no_errors	TMC5	HGNC	ENSG00000103534	tier1	-	-	51	0	0.00	24	15	38.46
TMEM249	0	genome.wustl.edu	37	8	145577021	145577021	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	8	145577021	145577021	C	A	SNP	TMEM249	ENST00000398633	human	ensembl	74_37	-1	known	missense	c.695	p.S232I	0.001	NULL	NULL	-	no_errors	TMEM249	HGNC	ENSG00000214597				32	0	0.00	96	11	10.28
TNS1	0	genome.wustl.edu	37	2	218750792	218750792	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	2	218750792	218750792	G	A	SNP	TNS1	ENST00000171887	human	ensembl	74_37	-1	known	nonsense	c.640	p.Q214*	1.000	pfam_Tensin_phosphatase_C2-dom,superfamily_C2_dom,pfscan_Tensin_phosphatase_C2-dom	pfam_PTB,pfam_Tensin_phosphatase_C2-dom,pfam_SH2,superfamily_C2_dom,smart_Tyr_Pase_cat,smart_SH2,smart_PTB/PI_dom,pfscan_SH2,pfscan_Phosphatase_tensin-typ,pfscan_Tensin_phosphatase_C2-dom	-	no_errors	TNS1	HGNC	ENSG00000079308	tier1	-	-	33	0	0.00	42	4	8.70
TOP3A	0	genome.wustl.edu	37	17	18217912	18217912	+	Splice_Site	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	17	18217912	18217912	C	T	SNP	TOP3A	ENST00000321105	human	ensembl	74_37	-1	known	splice_site	c.180+1	e1+1	1.000	-	-	-	no_errors	TOP3A	HGNC	ENSG00000177302				20	0	0.00	37	3	7.50
TP53	0	genome.wustl.edu	37	17	7578479	7578479	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	17	7578479	7578479	G	A	SNP	TP53	ENST00000269305	human	ensembl	74_37	-1	known	missense	c.451	p.P151S	0.999	pfam_p53_DNA-bd,superfamily_p53-like_TF_DNA-bd	pfam_p53_DNA-bd,pfam_p53_tetrameristn,pfam_p53_transactivation_domain,superfamily_p53-like_TF_DNA-bd,superfamily_p53_tetrameristn,prints_p53_tumour_suppressor	-	no_errors	TP53	HGNC	ENSG00000141510	tier1	rs28934874	-	15	0	0.00	5	31	86.11
TPO	0	genome.wustl.edu	37	2	1500468	1500468	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	2	1500468	1500468	G	T	SNP	TPO	ENST00000329066	human	ensembl	74_37	+1	known	nonsense	c.2317	p.E773*	0.000	superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_Haem_peroxidase_animal,pfam_EGF-like_Ca-bd_dom,superfamily_Haem_peroxidase,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Sushi_SCR_CCP,pfscan_Haem_peroxidase_animal,prints_Haem_peroxidase_animal_subgr	-	no_errors	TPO	HGNC	ENSG00000115705	tier1	-	-	37	0	0.00	52	4	7.14
TRAF1	0	genome.wustl.edu	37	9	123688278	123688278	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	9	123688278	123688278	C	T	SNP	TRAF1	ENST00000373887	human	ensembl	74_37	-1	known	missense	c.76	p.V26I	0.000	pirsf_TNF_rcpt--assoc_TRAF	pfam_MATH,superfamily_TRAF-like,smart_MATH,pirsf_TNF_rcpt--assoc_TRAF,pfscan_MATH	-	no_errors	TRAF1	HGNC	ENSG00000056558	tier1	-	-	46	0	0.00	60	33	35.48
TRIM17	0	genome.wustl.edu	37	1	228602544	228602544	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	228602544	228602544	T	A	SNP	TRIM17	ENST00000295033	human	ensembl	74_37	-1	known	missense	c.230	p.N77I	1.000	NULL	pfam_SPRY_rcpt,pfam_Znf_B-box,pfam_Znf_C3HC4_RING-type,superfamily_ConA-like_lec_gl_sf,smart_Znf_RING,smart_Znf_B-box,smart_PRY,smart_SPla/RYanodine_receptor_subgr,pfscan_B30.2/SPRY,pfscan_Znf_B-box,pfscan_Znf_RING,prints_Butyrophylin	-	no_errors	TRIM17	HGNC	ENSG00000162931	tier1	-	-	67	0	0.00	58	23	28.05
TRIP4	0	genome.wustl.edu	37	15	64692982	64692982	+	Nonsense_Mutation	SNP	C	C	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	15	64692982	64692982	C	G	SNP	TRIP4	ENST00000261884	human	ensembl	74_37	+1	known	nonsense	c.659	p.S220*	1.000	NULL	pfam_ASCH_domain,pfam_Znf_C2HC5,superfamily_PUA-like_domain	-	no_errors	TRIP4	HGNC	ENSG00000103671	tier1	-	-	66	0	0.00	108	66	37.93
TUBB6	0	genome.wustl.edu	37	18	12325138	12325138	+	Missense_Mutation	SNP	T	T	G			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	18	12325138	12325138	T	G	SNP	TUBB6	ENST00000317702	human	ensembl	74_37	+1	known	missense	c.350	p.L117R	1.000	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Gamma_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB6	HGNC	ENSG00000176014	tier1	-	-	39	0	0.00	41	12	22.64
TUBB6	0	genome.wustl.edu	37	18	12325139	12325139	+	Silent	SNP	G	G	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	18	12325139	12325139	G	T	SNP	TUBB6	ENST00000317702	human	ensembl	74_37	+1	known	silent	c.351	p.L117	0.999	pfam_Tubulin_FtsZ_GTPase,superfamily_Tubulin_FtsZ_GTPase,smart_Tubulin_FtsZ_GTPase,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Gamma_tubulin	pfam_Tubulin_FtsZ_GTPase,pfam_Tubulin/FtsZ_2-layer-sand-dom,pfam_Misato_II_tubulin-like,superfamily_Tubulin_FtsZ_GTPase,superfamily_Tub_FtsZ_C,smart_Tubulin_FtsZ_GTPase,smart_Tubulin/FtsZ_2-layer-sand-dom,prints_Beta_tubulin,prints_Tubulin,prints_Epsilon_tubulin,prints_Delta_tubulin,prints_Gamma_tubulin,prints_Alpha_tubulin	-	no_errors	TUBB6	HGNC	ENSG00000176014	tier1	-	-	38	0	0.00	40	12	23.08
TUBE1	0	genome.wustl.edu	37	6	112392560	112392560	+	RNA	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	6	112392560	112392560	G	A	SNP	TUBE1	ENST00000604814	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.023	-	-	-	no_errors	TUBE1	HGNC	ENSG00000074935	tier1	-	-	64	0	0.00	43	22	33.85
TUBGCP3	0	genome.wustl.edu	37	13	113201973	113201973	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	13	113201973	113201973	G	A	SNP	TUBGCP3	ENST00000261965	human	ensembl	74_37	-1	known	nonsense	c.1129	p.R377*	1.000	pfam_TUBGCP	pfam_TUBGCP	-	no_errors	TUBGCP3	HGNC	ENSG00000126216				25	0	0.00	34	3	8.11
UTP20	0	genome.wustl.edu	37	12	101728221	101728221	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	12	101728221	101728221	G	C	SNP	UTP20	ENST00000261637	human	ensembl	74_37	+1	known	missense	c.3580	p.E1194Q	1.000	superfamily_ARM-type_fold	pfam_DRIM,superfamily_ARM-type_fold	-	no_errors	UTP20	HGNC	ENSG00000120800	tier1	-	-	29	0	0.00	36	6	14.29
VPS13C	0	genome.wustl.edu	37	15	62207860	62207860	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	15	62207860	62207860	T	A	SNP	VPS13C	ENST00000261517	human	ensembl	74_37	-1	known	missense	c.8417	p.K2806M	1.000	pfam_VPSAP_dom	pfam_VPSAP_dom,pfam_Autophagy-rel_C	-	no_errors	VPS13C	HGNC	ENSG00000129003	tier1	-	-	64	0	0.00	73	36	33.03
WASH3P	0	genome.wustl.edu	37	15	102506815	102506816	+	RNA	DEL	CC	CC	-			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	CC	CC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	15	102506815	102506816	CC	-	DEL	WASH3P	ENST00000559884	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	WASH3P	HGNC	ENSG00000185596	tier1			8	0	0.00	9	4	30.77
WDR55	0	genome.wustl.edu	37	5	140049102	140049102	+	Frame_Shift_Del	DEL	A	A	-			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	5	140049102	140049102	A	-	DEL	WDR55	ENST00000358337	human	ensembl	74_37	+1	known	frame_shift_del	c.1015	p.K341fs	1.000	pirsf_WD_repeat_p55	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pirsf_WD_repeat_p55,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	WDR55	HGNC	ENSG00000120314	tier1			19	0	0.00	21	2	8.70
WIZ	0	genome.wustl.edu	37	19	15538113	15538113	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	15538113	15538113	G	A	SNP	WIZ	ENST00000389282	human	ensembl	74_37	-1	known	missense	c.3332	p.A1111V	1.000	NULL	smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	WIZ	HGNC	ENSG00000011451	tier1	-	-	79	0	0.00	57	4	6.56
ZCCHC24	0	genome.wustl.edu	37	10	81192403	81192403	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	10	81192403	81192403	C	T	SNP	ZCCHC24	ENST00000372336	human	ensembl	74_37	-1	known	missense	c.358	p.E120K	1.000	superfamily_Znf_CCHC	superfamily_Znf_CCHC,pfscan_Znf_CCHC	-	no_errors	ZCCHC24	HGNC	ENSG00000165424	tier1	rs141500674	-	28	0	0.00	32	18	36.00
ZIC5	0	genome.wustl.edu	37	13	100622679	100622679	+	Silent	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	13	100622679	100622679	C	T	SNP	ZIC5	ENST00000267294	human	ensembl	74_37	-1	known	silent	c.1251	p.P417	0.808	NULL	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZIC5	HGNC	ENSG00000139800				17	0	0.00	22	2	8.33
ZMYM6	0	genome.wustl.edu	37	1	35455732	35455732	+	RNA	SNP	T	T	C			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	1	35455732	35455732	T	C	SNP	ZMYM6	ENST00000493328	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.017	-	-	-	no_errors	ZMYM6	HGNC	ENSG00000163867	tier1	-	-	8	0	0.00	5	8	61.54
ZNF493	0	genome.wustl.edu	37	19	21606488	21606488	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	21606488	21606488	C	T	SNP	ZNF493	ENST00000355504	human	ensembl	74_37	+1	known	missense	c.643	p.H215Y	0.994	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF493	HGNC	ENSG00000196268	tier1	-	-	91	0	0.00	58	37	38.95
ZNF766	0	genome.wustl.edu	37	19	52794236	52794236	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	52794236	52794236	C	A	SNP	ZNF766	ENST00000359102	human	ensembl	74_37	+1	known	missense	c.1237	p.L413I	0.004	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF766	HGNC	ENSG00000196214	tier1	-	-	64	0	0.00	59	23	28.05
ZNF816-ZNF321P	0	genome.wustl.edu	37	19	53431622	53431622	+	RNA	DEL	G	G	-			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	19	53431622	53431622	G	-	DEL	ZNF816-ZNF321P	ENST00000313956	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.082	-	-	-	no_errors	ZNF816-ZNF321P	HGNC	ENSG00000213801	tier1			21	0	0.00	27	2	6.90
ZNFX1	0	genome.wustl.edu	37	20	47866096	47866096	+	Silent	SNP	G	G	A			TCGA-VR-AA7D-01A-11D-A403-09	TCGA-VR-AA7D-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	26db3638-64d4-4301-b3e0-2b75879facdf	bf56eaf2-cc4f-44bf-aa68-18b6471a9581	20	47866096	47866096	G	A	SNP	ZNFX1	ENST00000371752	human	ensembl	74_37	-1	known	silent	c.3465	p.T1155	1.000	superfamily_P-loop_NTPase	superfamily_P-loop_NTPase,superfamily_ARM-type_fold,smart_Znf_NFX1	-	no_errors	ZNFX1	HGNC	ENSG00000124201	tier1	-	-	32	0	0.00	38	17	30.91
