Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	default_gene_name	gene_name_source	ensembl_gene_id	tier	title	header	normal_ref_reads	normal_var_reads	normal_VAF	tumor_ref_reads	tumor_var_reads	tumor_VAF
ACSS3	0	genome.wustl.edu	37	12	81627164	81627164	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	12	81627164	81627164	G	A	SNP	ACSS3	ENST00000548058	human	ensembl	74_37	+1	known	missense	c.1633	p.E545K	1.000	pfam_AMP-dep_Synth/Lig	pfam_AMP-dep_Synth/Lig	-	no_errors	ACSS3	HGNC	ENSG00000111058	tier1	-	-	40	0	0.00	87	16	15.53
ADCY7	0	genome.wustl.edu	37	16	50334726	50334726	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	16	50334726	50334726	G	A	SNP	ADCY7	ENST00000254235	human	ensembl	74_37	+1	known	missense	c.1177	p.D393N	1.000	pfam_A/G_cyclase,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	pfam_A/G_cyclase,pfam_Adenylate_cyclase-like,superfamily_A/G_cyclase,smart_A/G_cyclase,pfscan_A/G_cyclase	-	no_errors	ADCY7	HGNC	ENSG00000121281	tier1	-	-	23	0	0.00	36	14	28.00
AGBL3	0	genome.wustl.edu	37	7	134719125	134719125	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	7	134719125	134719125	C	G	SNP	AGBL3	ENST00000458078	human	ensembl	74_37	+1	known	missense	c.705	p.D235E	0.996	NULL	pfam_Peptidase_M14	-	no_errors	AGBL3	HGNC	ENSG00000146856	tier1	-	-	14	0	0.00	20	7	25.93
AMY1B	0	genome.wustl.edu	37	1	104234015	104234015	+	Silent	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	104234015	104234015	C	T	SNP	AMY1B	ENST00000330330	human	ensembl	74_37	-1	known	silent	c.1002	p.R334	1.000	pfam_Glyco_hydro_13_cat_dom,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom	pfam_Glyco_hydro_13_cat_dom,pfam_A-amylase_b_C,superfamily_Glycoside_hydrolase_SF,smart_Glyco_hydro_13_sub_cat_dom,smart_A-amylase_b_C,prints_Alpha_amylase	-	no_errors	AMY1B	HGNC	ENSG00000174876	tier1	-	-	77	0	0.00	131	16	10.88
ANXA7	0	genome.wustl.edu	37	10	75135833	75135834	+	RNA	INS	-	-	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	10	75135833	75135834	-	A	INS	ANXA7	ENST00000463788	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.032:0.003	-	-	-	no_errors	ANXA7	HGNC	ENSG00000138279	tier1			22	0	0.00	34	6	15.00
APOB	0	genome.wustl.edu	37	2	21231903	21231903	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	21231903	21231903	G	T	SNP	APOB	ENST00000233242	human	ensembl	74_37	-1	known	missense	c.7837	p.Q2613K	0.987	NULL	pfam_Lipid_transpt_N,pfam_Vitellinogen_open_b-sht,pfam_ApoB100_C,pfam_Lipid_transpt_open_b-sht,superfamily_Lipid_transp_b-sht_shell,superfamily_Vitellinogen_superhlx,superfamily_ARM-type_fold,smart_Lipid_transpt_N,pfscan_Lipid_transpt_N	-	no_errors	APOB	HGNC	ENSG00000084674	tier1	-	-	32	0	0.00	59	6	9.23
ARID1B	0	genome.wustl.edu	37	6	157527315	157527315	+	Silent	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	6	157527315	157527315	C	T	SNP	ARID1B	ENST00000367148	human	ensembl	74_37	+1	known	silent	c.5160	p.L1720	0.020	NULL	pfam_DUF3518,pfam_ARID/BRIGHT_DNA-bd,superfamily_ARID/BRIGHT_DNA-bd,superfamily_ARM-type_fold,smart_ARID/BRIGHT_DNA-bd,pfscan_ARID/BRIGHT_DNA-bd	-	no_errors	ARID1B	HGNC	ENSG00000049618	tier1	-	-	23	0	0.00	30	7	18.92
ARPP21	0	genome.wustl.edu	37	3	35763159	35763159	+	Missense_Mutation	SNP	T	T	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	3	35763159	35763159	T	G	SNP	ARPP21	ENST00000417925	human	ensembl	74_37	+1	known	missense	c.956	p.L319R	0.989	NULL	pfam_R3H_ss-bd,smart_R3H_ss-bd,pfscan_R3H_ss-bd	-	no_errors	ARPP21	HGNC	ENSG00000172995	tier1	-	-	11	0	0.00	11	10	47.62
ASTN1	0	genome.wustl.edu	37	1	176926901	176926901	+	Silent	SNP	C	C	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	176926901	176926901	C	A	SNP	ASTN1	ENST00000367654	human	ensembl	74_37	-1	known	silent	c.1824	p.P608	0.111	NULL	superfamily_Fibronectin_type3,smart_EG-like_dom,smart_MACPF,pfscan_Fibronectin_type3	-	no_errors	ASTN1	HGNC	ENSG00000152092	tier1	-	-	11	0	0.00	29	12	29.27
ATF7IP	0	genome.wustl.edu	37	12	14650645	14650645	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	12	14650645	14650645	C	G	SNP	ATF7IP	ENST00000261168	human	ensembl	74_37	+1	known	missense	c.3451	p.L1151V	0.983	NULL	superfamily_Fibronectin_type3,pfscan_Fibronectin_type3	-	no_errors	ATF7IP	HGNC	ENSG00000171681	tier1	-	-	9	0	0.00	22	7	24.14
ATP11B	0	genome.wustl.edu	37	3	182586882	182586883	+	Frame_Shift_Ins	INS	-	-	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	3	182586882	182586883	-	T	INS	ATP11B	ENST00000323116	human	ensembl	74_37	+1	known	frame_shift_ins	c.1705_1706	p.L570fs	0.899:0.993	superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP11B	HGNC	ENSG00000058063	tier1			59	0	0.00	144	20	12.20
ATP9A	0	genome.wustl.edu	37	20	50221436	50221436	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	20	50221436	50221436	C	A	SNP	ATP9A	ENST00000338821	human	ensembl	74_37	-1	known	missense	c.2927	p.W976L	1.000	tigrfam_ATPase_P-typ_Plipid-transp	pfam_ATPase_P-typ_transduc_dom_A,pfam_HAD-like_dom,superfamily_HAD-like_dom,superfamily_ATPase_P-typ_cyto_domN,prints_Cation_transp_P_typ_ATPase,tigrfam_ATPase_P-typ_Plipid-transp,tigrfam_Cation_transp_P_typ_ATPase	-	no_errors	ATP9A	HGNC	ENSG00000054793	tier1	-	-	18	0	0.00	31	9	22.50
BAGE5	0	genome.wustl.edu	37	GL000237.1	2485	2485	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	GL000237.1	2485	2485	C	T	SNP	BAGE5	ENST00000602027	human	ensembl	74_37	-1	known	missense	c.3	p.M1I	NULL	pfam_BAGE	pfam_BAGE	-	no_errors	BAGE5	HGNC	ENSG00000268590	tier1	-	-	22	0	0.00	48	13	21.31
BICD2	0	genome.wustl.edu	37	9	95481107	95481107	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	9	95481107	95481107	G	A	SNP	BICD2	ENST00000356884	human	ensembl	74_37	-1	known	missense	c.1820	p.P607L	1.000	pfam_Bicaudal-D_microtubule-assoc	pfam_Bicaudal-D_microtubule-assoc	-	no_errors	BICD2	HGNC	ENSG00000185963	tier1	-	-	12	0	0.00	8	10	55.56
C11orf73	0	genome.wustl.edu	37	11	86056753	86056753	+	RNA	SNP	A	A	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	11	86056753	86056753	A	G	SNP	C11orf73	ENST00000531485	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.001	-	-	-	no_errors	C11orf73	HGNC	ENSG00000149196	tier1	-	-	24	0	0.00	22	21	48.84
C17orf78	0	genome.wustl.edu	37	17	35736300	35736300	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	17	35736300	35736300	G	C	SNP	C17orf78	ENST00000300618	human	ensembl	74_37	+1	known	missense	c.371	p.G124A	0.115	NULL	NULL	-	no_errors	C17orf78	HGNC	ENSG00000167230	tier1	-	-	14	0	0.00	29	12	29.27
C6orf58	0	genome.wustl.edu	37	6	127911258	127911258	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	6	127911258	127911258	C	T	SNP	C6orf58	ENST00000329722	human	ensembl	74_37	+1	known	missense	c.701	p.A234V	0.156	pfam_DUF781	pfam_DUF781	-	no_errors	C6orf58	HGNC	ENSG00000184530	tier1	-	-	34	0	0.00	74	10	11.90
C8orf34	0	genome.wustl.edu	37	8	69243280	69243280	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	8	69243280	69243280	G	C	SNP	C8orf34	ENST00000518698	human	ensembl	74_37	+1	known	missense	c.33	p.E11D	1.000	NULL	superfamily_cAMP_dep_PK_reg_su_I/II_a/b	-	no_errors	C8orf34	HGNC	ENSG00000165084	tier1	-	-	11	0	0.00	14	5	26.32
CCDC30	0	genome.wustl.edu	37	1	43111845	43111845	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	43111845	43111845	G	T	SNP	CCDC30	ENST00000340612	human	ensembl	74_37	+1	known	missense	c.1930	p.G644C	0.743	NULL	NULL	-	no_errors	CCDC30	HGNC	ENSG00000186409	tier1	-	-	46	0	0.00	69	4	5.48
CCER1	0	genome.wustl.edu	37	12	91347661	91347661	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	12	91347661	91347661	C	T	SNP	CCER1	ENST00000358859	human	ensembl	74_37	-1	known	missense	c.859	p.E287K	0.011	NULL	NULL	-	no_errors	CCER1	HGNC	ENSG00000197651	tier1	-	-	16	0	0.00	23	14	37.84
CCHCR1	0	genome.wustl.edu	37	6	31122453	31122453	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	6	31122453	31122453	C	G	SNP	CCHCR1	ENST00000396268	human	ensembl	74_37	-1	known	missense	c.621	p.Q207H	1.000	pfam_HCR	pfam_HCR	-	no_errors	CCHCR1	HGNC	ENSG00000204536	tier1	-	-	8	0	0.00	15	8	34.78
CCSER2	0	genome.wustl.edu	37	10	86273532	86273532	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	10	86273532	86273532	C	G	SNP	CCSER2	ENST00000372088	human	ensembl	74_37	+1	known	missense	c.2653	p.P885A	0.018	NULL	NULL	-	no_errors	CCSER2	HGNC	ENSG00000107771	tier1	-	-	19	0	0.00	34	13	27.66
CCT2	0	genome.wustl.edu	37	12	69986782	69986782	+	Silent	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	12	69986782	69986782	C	T	SNP	CCT2	ENST00000299300	human	ensembl	74_37	+1	known	silent	c.777	p.D259	1.000	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,tigrfam_Chap_CCT_beta	pfam_Cpn60/TCP-1,superfamily_Cpn60/TCP-1,superfamily_GroEL-like_apical_dom,prints_Chaperone_TCP-1,prints_Chaprnin_Cpn60,tigrfam_Chap_CCT_beta	-	no_errors	CCT2	HGNC	ENSG00000166226	tier1	-	-	43	0	0.00	68	32	32.00
CLASP2	0	genome.wustl.edu	37	3	33686848	33686848	+	RNA	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	3	33686848	33686848	C	T	SNP	CLASP2	ENST00000476433	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.947	-	-	-	no_errors	CLASP2	HGNC	ENSG00000163539	tier1	-	-	24	0	0.00	31	19	38.00
CLCA2	0	genome.wustl.edu	37	1	86900239	86900239	+	Missense_Mutation	SNP	A	A	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	86900239	86900239	A	C	SNP	CLCA2	ENST00000370565	human	ensembl	74_37	+1	known	missense	c.783	p.E261D	1.000	pfam_Cl_channel_Ca,tigrfam_CaCC_prot	pfam_Cl_channel_Ca,pfam_DUF1973,pfam_VWF_A,smart_VWF_A,pfscan_VWF_A,tigrfam_CaCC_prot	-	no_errors	CLCA2	HGNC	ENSG00000137975	tier1	-	-	23	0	0.00	38	19	33.33
CLDN9	0	genome.wustl.edu	37	16	3063367	3063367	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	16	3063367	3063367	G	A	SNP	CLDN9	ENST00000445369	human	ensembl	74_37	+1	known	missense	c.4	p.A2T	1.000	NULL	pfam_PMP22/EMP/MP20/Claudin,prints_Claudin,prints_Claudin9	-	no_errors	CLDN9	HGNC	ENSG00000213937	tier1	-	-	12	0	0.00	15	11	42.31
CMTM8	0	genome.wustl.edu	37	3	32409471	32409471	+	Silent	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	3	32409471	32409471	G	T	SNP	CMTM8	ENST00000307526	human	ensembl	74_37	+1	known	silent	c.429	p.A143	0.006	pfam_Marvel,prints_MAL	pfam_Marvel,prints_MAL	-	no_errors	CMTM8	HGNC	ENSG00000170293	tier1	-	-	11	0	0.00	6	8	57.14
CNTNAP3	0	genome.wustl.edu	37	9	39073896	39073899	+	Frame_Shift_Del	DEL	TTCT	TTCT	-			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	TTCT	TTCT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	9	39073896	39073899	TTCT	-	DEL	CNTNAP3	ENST00000297668	human	ensembl	74_37	-1	known	frame_shift_del	c.3858_3855	p.E1286fs	0.987:0.983:0.986:0.966	NULL	pfam_Laminin_G,pfam_Coagulation_fac_5/8-C_type_dom,superfamily_Galactose-bd-like,superfamily_ConA-like_lec_gl_sf,superfamily_Fibrinogen_a/b/g_C_dom,smart_Coagulation_fac_5/8-C_type_dom,smart_Laminin_G,smart_EG-like_dom,pfscan_EG-like_dom,pfscan_Coagulation_fac_5/8-C_type_dom,pfscan_Laminin_G	-	no_errors	CNTNAP3	HGNC	ENSG00000106714	tier1			8	0	0.00	16	12	42.86
COBLL1	0	genome.wustl.edu	37	2	165548881	165548881	+	Missense_Mutation	SNP	C	C	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	165548881	165548881	C	G	SNP	COBLL1	ENST00000194871	human	ensembl	74_37	-1	known	missense	c.3465	p.Q1155H	0.976	NULL	pfam_Cordon-bleu_ubiquitin_domain,pfscan_WH2_dom	-	no_errors	COBLL1	HGNC	ENSG00000082438	tier1	-	-	23	0	0.00	54	9	14.29
COL15A1	0	genome.wustl.edu	37	9	101818559	101818559	+	Silent	SNP	A	A	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	9	101818559	101818559	A	C	SNP	COL15A1	ENST00000375001	human	ensembl	74_37	+1	known	silent	c.3210	p.T1070	0.000	NULL	pfam_Collagenase_NC10/endostatin,pfam_Collagen,superfamily_C-type_lectin_fold,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G	-	no_errors	COL15A1	HGNC	ENSG00000204291	tier1	-	-	17	0	0.00	12	20	62.50
COL6A1	0	genome.wustl.edu	37	21	47423346	47423346	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	21	47423346	47423346	G	A	SNP	COL6A1	ENST00000361866	human	ensembl	74_37	+1	known	missense	c.2506	p.G836S	1.000	pfam_VWF_A,smart_VWF_A,pfscan_VWF_A	pfam_VWF_A,pfam_Collagen,smart_VWF_A,pfscan_VWF_A	-	no_errors	COL6A1	HGNC	ENSG00000142156	tier1	-	-	13	0	0.00	8	23	74.19
CSMD3	0	genome.wustl.edu	37	8	113314147	113314147	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	8	113314147	113314147	C	T	SNP	CSMD3	ENST00000297405	human	ensembl	74_37	-1	known	missense	c.8315	p.G2772E	1.000	pfam_Sushi_SCR_CCP,superfamily_Sushi_SCR_CCP,smart_Sushi_SCR_CCP,pfscan_Sushi_SCR_CCP	pfam_CUB_dom,pfam_Sushi_SCR_CCP,superfamily_CUB_dom,superfamily_Sushi_SCR_CCP,smart_CUB_dom,smart_Sushi_SCR_CCP,pfscan_CUB_dom,pfscan_Sushi_SCR_CCP	-	no_errors	CSMD3	HGNC	ENSG00000164796	tier1	-	-	18	0	0.00	59	12	16.90
DCAF12L1	0	genome.wustl.edu	37	X	125685222	125685222	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	X	125685222	125685222	T	C	SNP	DCAF12L1	ENST00000371126	human	ensembl	74_37	-1	known	missense	c.1370	p.N457S	0.999	NULL	pfam_WD40_repeat,superfamily_WD40_repeat_dom,smart_WD40_repeat,pfscan_WD40_repeat,pfscan_WD40_repeat_dom	-	no_errors	DCAF12L1	HGNC	ENSG00000198889	tier1	-	-	21	0	0.00	30	35	53.85
DDX3X	0	genome.wustl.edu	37	X	41207100	41207100	+	RNA	DEL	T	T	-			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	X	41207100	41207100	T	-	DEL	DDX3X	ENST00000478993	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	DDX3X	HGNC	ENSG00000215301	tier1			14	0	0.00	21	4	16.00
DHX32	0	genome.wustl.edu	37	10	127548228	127548228	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	10	127548228	127548228	C	T	SNP	DHX32	ENST00000284690	human	ensembl	74_37	-1	known	missense	c.793	p.E265K	1.000	superfamily_P-loop_NTPase	pfam_Helicase-assoc_dom,pfam_DUF1605,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd	-	no_errors	DHX32	HGNC	ENSG00000089876	tier1	-	-	38	0	0.00	66	7	9.59
DHX35	0	genome.wustl.edu	37	20	37650518	37650518	+	Silent	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	20	37650518	37650518	C	T	SNP	DHX35	ENST00000252011	human	ensembl	74_37	+1	known	silent	c.1533	p.I511	0.805	pfam_Helicase-assoc_dom,superfamily_P-loop_NTPase,smart_Helicase-assoc_dom	pfam_DUF1605,pfam_Helicase-assoc_dom,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,smart_Helicase_ATP-bd,smart_Helicase_C,smart_Helicase-assoc_dom,pfscan_Helicase_ATP-bd,pfscan_Helicase_C	-	no_errors	DHX35	HGNC	ENSG00000101452	tier1	-	-	29	0	0.00	41	8	16.33
DNAH8	0	genome.wustl.edu	37	6	38854597	38854597	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	6	38854597	38854597	G	T	SNP	DNAH8	ENST00000359357	human	ensembl	74_37	+1	known	nonsense	c.7639	p.E2547*	1.000	pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-1,pfam_Dynein_heavy_dom-2,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	-	no_errors	DNAH8	HGNC	ENSG00000124721	tier1	-	-	12	0	0.00	39	13	25.00
DNM1P47	0	genome.wustl.edu	37	15	102312241	102312241	+	RNA	DEL	A	A	-			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	15	102312241	102312241	A	-	DEL	DNM1P47	ENST00000561463	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	DNM1P47	HGNC	ENSG00000259660	tier1			8	0	0.00	4	8	66.67
DRD2	0	genome.wustl.edu	37	11	113295305	113295305	+	Silent	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	11	113295305	113295305	G	A	SNP	DRD2	ENST00000355319	human	ensembl	74_37	-1	known	silent	c.69	p.N23	0.209	NULL	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfscan_GPCR_Rhodpsn_7TM,prints_Dopamine_D2_rcpt,prints_GPCR_Rhodpsn,prints_Dopamine_rcpt	-	no_errors	DRD2	HGNC	ENSG00000149295	tier1	rs200831689	-	18	0	0.00	33	6	15.38
DYSF	0	genome.wustl.edu	37	2	71906280	71906280	+	Missense_Mutation	SNP	A	A	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	71906280	71906280	A	C	SNP	DYSF	ENST00000413539	human	ensembl	74_37	+1	known	missense	c.5954	p.E1985A	0.960	superfamily_C2_dom	pfam_C2_dom,pfam_Ferlin_B-domain,pfam_FerIin-domain,pfam_Ferlin_A-domain,superfamily_C2_dom,superfamily_MFS_dom_general_subst_transpt,smart_C2_dom,smart_Peroxin/Ferlin,pfscan_C2_dom	-	no_errors	DYSF	HGNC	ENSG00000135636	tier1	-	-	29	0	0.00	58	8	12.12
EN1	0	genome.wustl.edu	37	2	119600737	119600737	+	Missense_Mutation	SNP	T	T	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	119600737	119600737	T	G	SNP	EN1	ENST00000295206	human	ensembl	74_37	-1	known	missense	c.956	p.K319T	1.000	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeodomain_engrailed	pfam_Homeobox_dom,pfam_Homeobox-engrailed_C-terminal,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Homeodomain_engrailed,prints_Homeobox_metazoa,prints_Antifreeze_1,prints_K_chnl_volt-dep_Kv1.4	-	no_errors	EN1	HGNC	ENSG00000163064	tier1	-	-	10	0	0.00	22	14	38.89
ENSG00000212884	0	genome.wustl.edu	37	GL000205.1	117491	117491	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	GL000205.1	117491	117491	G	C	SNP	ENSG00000212884	ENST00000391571	human	ensembl	74_37	+1	known	missense	c.122	p.G41A	NULL	pfam_D-isomer_2_OHA_DH_cat_dom	pfam_D-isomer_2_OHA_DH_cat_dom	-	no_errors	AC011841.1	Clone_based_ensembl_gene	ENSG00000212884	tier1	-	-	9	0	0.00	25	5	16.67
ENSG00000212884	0	genome.wustl.edu	37	GL000205.1	117561	117561	+	Silent	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	GL000205.1	117561	117561	C	T	SNP	ENSG00000212884	ENST00000391571	human	ensembl	74_37	+1	known	silent	c.192	p.S64	NULL	pfam_D-isomer_2_OHA_DH_cat_dom	pfam_D-isomer_2_OHA_DH_cat_dom	-	no_errors	AC011841.1	Clone_based_ensembl_gene	ENSG00000212884	tier1	-	-	10	0	0.00	19	7	26.92
ENSG00000221018	0	genome.wustl.edu	37	8	39613675	39613675	+	RNA	SNP	A	A	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	8	39613675	39613675	A	G	SNP	ENSG00000221018	ENST00000408091	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	AC136365.1	Clone_based_ensembl_gene	ENSG00000221018	tier1	-	-	36	0	0.00	98	13	11.71
ENSG00000221474	0	genome.wustl.edu	37	3	122000727	122000728	+	RNA	INS	-	-	TG			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	3	122000727	122000728	-	TG	INS	ENSG00000221474	ENST00000408547	human	ensembl	74_37	+1	novel	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC068754.1	Clone_based_ensembl_gene	ENSG00000221474	tier1			11	0	0.00	27	2	6.90
ENSG00000231242	0	genome.wustl.edu	37	9	69083127	69083127	+	RNA	SNP	A	A	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	9	69083127	69083127	A	G	SNP	ENSG00000231242	ENST00000412376	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.005	-	-	-	no_errors	RP11-87H9.3	Clone_based_vega_gene	ENSG00000231242	tier1	-	-	54	0	0.00	68	10	12.82
ENSG00000232220	0	genome.wustl.edu	37	19	54379103	54379104	+	RNA	INS	-	-	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	19	54379103	54379104	-	A	INS	ENSG00000232220	ENST00000413496	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000:0.000	-	-	-	no_errors	AC008440.5	Clone_based_vega_gene	ENSG00000232220	tier1			10	0	0.00	27	8	22.86
ENSG00000234978	0	genome.wustl.edu	37	1	142803240	142803240	+	RNA	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	142803240	142803240	G	A	SNP	ENSG00000234978	ENST00000423385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.014	-	-	-	no_errors	RP11-423O2.5	Clone_based_vega_gene	ENSG00000234978	tier1	rs76010818	-	37	0	0.00	74	9	10.84
ENSG00000239969	0	genome.wustl.edu	37	7	102021027	102021027	+	RNA	SNP	T	T	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	7	102021027	102021027	T	C	SNP	ENSG00000239969	ENST00000484974	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.052	-	-	-	no_errors	RP11-163E9.2	Clone_based_vega_gene	ENSG00000239969	tier1	-	-	27	0	0.00	32	5	13.51
ENSG00000256341	0	genome.wustl.edu	37	11	63886079	63886079	+	RNA	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	11	63886079	63886079	C	T	SNP	ENSG00000256341	ENST00000543817	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.008	-	-	-	no_errors	RP11-21A7A.3	Clone_based_vega_gene	ENSG00000256341	tier1	-	-	73	0	0.00	239	15	5.84
ENSG00000264877	0	genome.wustl.edu	37	9	137740955	137740955	+	RNA	SNP	A	A	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	9	137740955	137740955	A	G	SNP	ENSG00000264877	ENST00000581079	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.061	-	-	-	no_errors	AL603650.2	Clone_based_ensembl_gene	ENSG00000264877	tier1	-	-	8	0	0.00	9	7	43.75
ENSG00000264877	0	genome.wustl.edu	37	9	137740961	137740961	+	RNA	SNP	A	A	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	9	137740961	137740961	A	C	SNP	ENSG00000264877	ENST00000581079	human	ensembl	74_37	-1	novel	rna	NULL	NULL	0.000	-	-	-	no_errors	AL603650.2	Clone_based_ensembl_gene	ENSG00000264877	tier1	-	-	8	0	0.00	7	7	46.67
ENSG00000272053	0	genome.wustl.edu	37	6	25042287	25042287	+	RNA	DEL	A	A	-			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	6	25042287	25042287	A	-	DEL	ENSG00000272053	ENST00000606385	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.045	-	-	-	no_errors	RP11-367G6.3	Clone_based_vega_gene	ENSG00000272053	tier1			9	0	0.00	19	7	26.92
ENSG00000273253	0	genome.wustl.edu	37	22	50637604	50637604	+	RNA	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	22	50637604	50637604	C	T	SNP	ENSG00000273253	ENST00000608025	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	RP3-402G11.26	Clone_based_vega_gene	ENSG00000273253	tier1	rs202137436	-	49	0	0.00	67	27	28.72
FAM208A	0	genome.wustl.edu	37	3	56681036	56681036	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	3	56681036	56681036	G	A	SNP	FAM208A	ENST00000355628	human	ensembl	74_37	-1	known	missense	c.1729	p.P577S	0.927	NULL	pfam_DUF3715	-	no_errors	FAM208A	HGNC	ENSG00000163946	tier1	-	-	59	0	0.00	56	44	44.00
FAM227B	0	genome.wustl.edu	37	15	49867238	49867238	+	Silent	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	15	49867238	49867238	G	A	SNP	FAM227B	ENST00000299338	human	ensembl	74_37	-1	known	silent	c.615	p.S205	0.910	NULL	NULL	-	no_errors	FAM227B	HGNC	ENSG00000166262	tier1	-	-	54	0	0.00	90	12	11.76
FAM71B	0	genome.wustl.edu	37	5	156592876	156592876	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	5	156592876	156592876	A	G	SNP	FAM71B	ENST00000302938	human	ensembl	74_37	-1	known	missense	c.304	p.W102R	0.000	NULL	pfam_DUF3699	-	no_errors	FAM71B	HGNC	ENSG00000170613	tier1	-	-	11	0	0.00	13	11	45.83
FCRL2	0	genome.wustl.edu	37	1	157740416	157740416	+	Silent	SNP	T	T	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	157740416	157740416	T	C	SNP	FCRL2	ENST00000361516	human	ensembl	74_37	-1	known	silent	c.93	p.G31	0.936	smart_Ig_sub,smart_Ig_sub2	pfam_Ig_I-set,pfam_Immunoglobulin,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	-	no_errors	FCRL2	HGNC	ENSG00000132704	tier1	-	-	11	0	0.00	25	9	26.47
FLT3LG	0	genome.wustl.edu	37	19	49979702	49979702	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	19	49979702	49979702	G	A	SNP	FLT3LG	ENST00000594009	human	ensembl	74_37	+1	known	nonsense	c.221	p.W74*	0.951	pfam_Flt3_lig,superfamily_4_helix_cytokine-like_core	pfam_Flt3_lig,superfamily_4_helix_cytokine-like_core	-	no_errors	FLT3LG	HGNC	ENSG00000090554	tier1	-	-	31	0	0.00	24	16	40.00
FRG1	0	genome.wustl.edu	37	4	190878599	190878599	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	4	190878599	190878599	A	G	SNP	FRG1	ENST00000226798	human	ensembl	74_37	+1	known	missense	c.479	p.N160S	1.000	pfam_FRG1,superfamily_Actin_cross-linking	pfam_FRG1,pfam_Fascin-domain,superfamily_Actin_cross-linking	-	no_errors	FRG1	HGNC	ENSG00000109536	tier1	-	-	85	0	0.00	176	15	7.85
FRG1B	0	genome.wustl.edu	37	20	29614264	29614264	+	Splice_Site	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	20	29614264	29614264	G	A	SNP	FRG1B	ENST00000278882	human	ensembl	74_37	+1	known	splice_site	c.1-1	e1-1	0.997	-	-	-	no_errors	FRG1B	HGNC	ENSG00000149531	tier1	-	-	53	0	0.00	105	13	11.02
GABRA1	0	genome.wustl.edu	37	5	161317917	161317917	+	Silent	SNP	T	T	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	5	161317917	161317917	T	G	SNP	GABRA1	ENST00000023897	human	ensembl	74_37	+1	known	silent	c.717	p.V239	0.989	pfam_Neur_chan_lig-bd,superfamily_Neur_chan_lig-bd,tigrfam_Neur_channel	pfam_Neur_chan_lig-bd,pfam_Neurotrans-gated_channel_TM,superfamily_Neur_chan_lig-bd,superfamily_Neurotrans-gated_channel_TM,prints_GABAAa_rcpt,prints_GABAA_rcpt,prints_GABBAa1_rcpt,prints_Neur_channel,prints_GABBAg_rcpt,tigrfam_Neur_channel	-	no_errors	GABRA1	HGNC	ENSG00000022355	tier1	-	-	21	0	0.00	29	22	43.14
GALNT14	0	genome.wustl.edu	37	2	31147091	31147091	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	31147091	31147091	C	T	SNP	GALNT14	ENST00000349752	human	ensembl	74_37	-1	known	missense	c.1274	p.R425Q	1.000	pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	pfam_Glyco_trans_2,pfam_Ricin_B_lectin,superfamily_Ricin_B_lectin,smart_Ricin_B_lectin,pfscan_Ricin_B_lectin	-	no_errors	GALNT14	HGNC	ENSG00000158089	tier1	-	-	27	0	0.00	68	9	11.54
GCC2	0	genome.wustl.edu	37	2	109086172	109086172	+	Silent	SNP	A	A	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	109086172	109086172	A	G	SNP	GCC2	ENST00000309863	human	ensembl	74_37	+1	known	silent	c.387	p.K129	0.991	NULL	pfam_GRIP,superfamily_GRIP,superfamily_tRNA-bd_arm,smart_GRIP,pfscan_GRIP	-	no_errors	GCC2	HGNC	ENSG00000135968	tier1	-	-	46	0	0.00	58	30	34.09
GPR98	0	genome.wustl.edu	37	5	90144561	90144561	+	Silent	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	5	90144561	90144561	C	T	SNP	GPR98	ENST00000405460	human	ensembl	74_37	+1	known	silent	c.17127	p.F5709	1.000	NULL	pfam_Calx_beta,pfam_EPTP,pfam_GPCR_2_secretin-like,pfam_GPS_dom,superfamily_ConA-like_lec_gl_sf,superfamily_Gal_Oxase/kelch_b-propeller,smart_Calx_beta,pfscan_EAR,pfscan_GPS_dom,pfscan_GPCR_2-like	-	no_errors	GPR98	HGNC	ENSG00000164199	tier1	-	-	34	0	0.00	60	8	11.76
GRIA3	0	genome.wustl.edu	37	X	122318472	122318472	+	Nonsense_Mutation	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	X	122318472	122318472	G	T	SNP	GRIA3	ENST00000264357	human	ensembl	74_37	+1	known	nonsense	c.85	p.G29*	1.000	superfamily_Peripla_BP_I	pfam_Iontro_glu_rcpt,pfam_ANF_lig-bd_rcpt,pfam_Glu_rcpt_Glu/Gly-bd,pfam_SBP_bac_3,superfamily_Peripla_BP_I,smart_Iontro_glu_rcpt,smart_Glu_rcpt_Glu/Gly-bd,prints_NMDA_rcpt	-	no_errors	GRIA3	HGNC	ENSG00000125675	tier1	-	-	52	0	0.00	89	92	50.83
HNRNPR	0	genome.wustl.edu	37	1	23636874	23636875	+	RNA	INS	-	-	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	23636874	23636875	-	T	INS	HNRNPR	ENST00000476660	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.973:0.936	-	-	-	no_errors	HNRNPR	HGNC	ENSG00000125944	tier1			19	0	0.00	55	6	9.84
HSP90AB1	0	genome.wustl.edu	37	6	44221086	44221086	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	6	44221086	44221086	G	A	SNP	HSP90AB1	ENST00000353801	human	ensembl	74_37	+1	known	missense	c.2036	p.R679H	1.000	pfam_Hsp90_fam,pirsf_Hsp90_fam	pfam_Hsp90_fam,pfam_HATPase_ATP-bd,superfamily_Ribosomal_S5_D2-typ_fold,superfamily_HATPase_ATP-bd,smart_HATPase_ATP-bd,pirsf_Hsp90_fam,prints_Hsp90_N	-	no_errors	HSP90AB1	HGNC	ENSG00000096384	tier1	rs199811663	-	30	0	0.00	42	9	17.65
KDM6B	0	genome.wustl.edu	37	17	7749410	7749410	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	17	7749410	7749410	G	C	SNP	KDM6B	ENST00000254846	human	ensembl	74_37	+1	known	missense	c.251	p.R84T	1.000	NULL	pfam_JmjC_dom,smart_JmjC_dom,pfscan_JmjC_dom	-	no_errors	KDM6B	HGNC	ENSG00000132510	tier1	-	-	10	0	0.00	24	13	35.14
KLHL32	0	genome.wustl.edu	37	6	97578788	97578788	+	Silent	SNP	T	T	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	6	97578788	97578788	T	C	SNP	KLHL32	ENST00000369261	human	ensembl	74_37	+1	known	silent	c.1569	p.T523	0.996	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL32	HGNC	ENSG00000186231	tier1	-	-	30	0	0.00	69	18	20.69
KLHL38	0	genome.wustl.edu	37	8	124658211	124658211	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	8	124658211	124658211	G	A	SNP	KLHL38	ENST00000325995	human	ensembl	74_37	-1	known	missense	c.1514	p.A505V	0.999	pfam_Kelch_1,smart_Kelch_1,pirsf_Kelch-like_gigaxonin	pfam_Kelch_1,pfam_BTB_POZ,pfam_BACK,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_BACK,smart_Kelch_1,pirsf_Kelch-like_gigaxonin,pfscan_BTB/POZ-like	-	no_errors	KLHL38	HGNC	ENSG00000175946	tier1	-	-	26	0	0.00	55	15	21.43
LETMD1	0	genome.wustl.edu	37	12	51442890	51442890	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	12	51442890	51442890	G	T	SNP	LETMD1	ENST00000262055	human	ensembl	74_37	+1	known	missense	c.196	p.A66S	0.379	NULL	pfam_LETM1	-	no_errors	LETMD1	HGNC	ENSG00000050426	tier1	-	-	43	0	0.00	65	4	5.80
LINC00116	0	genome.wustl.edu	37	2	110970017	110970017	+	RNA	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	110970017	110970017	C	T	SNP	LINC00116	ENST00000414416	human	ensembl	74_37	-1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	LINC00116	HGNC	ENSG00000175701	tier1	-	-	22	0	0.00	27	13	32.50
LINC00242	0	genome.wustl.edu	37	6	170190213	170190213	+	RNA	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	6	170190213	170190213	G	A	SNP	LINC00242	ENST00000437615	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.000	-	-	-	no_errors	LINC00242	HGNC	ENSG00000229214	tier1	-	-	33	0	0.00	66	7	9.59
LINC00461	0	genome.wustl.edu	37	5	87968912	87968913	+	RNA	INS	-	-	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	5	87968912	87968913	-	A	INS	LINC00461	ENST00000505030	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.773:0.805	-	-	-	no_errors	LINC00461	HGNC	ENSG00000245526	tier1			12	0	0.00	22	3	12.00
LINC00661	0	genome.wustl.edu	37	19	16136522	16136523	+	RNA	INS	-	-	CA			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	19	16136522	16136523	-	CA	INS	LINC00661	ENST00000549354	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.014:0.013	-	-	-	no_errors	LINC00661	HGNC	ENSG00000205396	tier1			18	0	0.00	45	11	19.64
LOC101927345	0	genome.wustl.edu	37	1	143398949	143398949	+	RNA	SNP	A	A	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	143398949	143398949	A	T	SNP	LOC101927345	ENST00000458155	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.181	-	-	-	no_errors	RP11-435B5.5	Clone_based_vega_gene	ENSG00000238261	tier1	-	-	28	0	0.00	43	7	14.00
LOC101929232	0	genome.wustl.edu	37	15	29083887	29083887	+	RNA	DEL	A	A	-			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	15	29083887	29083887	A	-	DEL	LOC101929232	ENST00000563144	human	ensembl	74_37	+1	putative	rna	NULL	NULL	0.999	-	-	-	no_errors	RP11-578F21.12	Clone_based_vega_gene	ENSG00000261377	tier1			91	0	0.00	145	34	18.99
LOC730102	0	genome.wustl.edu	37	1	178000792	178000792	+	RNA	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	178000792	178000792	G	A	SNP	LOC730102	ENST00000476232	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.665	-	-	-	no_errors	RP11-568K15.1	Clone_based_vega_gene	ENSG00000242193	tier1	-	-	37	0	0.00	70	25	26.32
LRFN5	0	genome.wustl.edu	37	14	42356936	42356936	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	14	42356936	42356936	G	T	SNP	LRFN5	ENST00000298119	human	ensembl	74_37	+1	known	missense	c.1108	p.V370L	0.995	pfam_Ig_I-set,smart_Ig_sub,pfscan_Ig-like_dom	pfam_Leu-rich_rpt,pfam_Ig_I-set,pfam_Immunoglobulin,superfamily_Fibronectin_type3,smart_Leu-rich_rpt_typical-subtyp,smart_Ig_sub,smart_Ig_sub2,pfscan_Fibronectin_type3,pfscan_Ig-like_dom	-	no_errors	LRFN5	HGNC	ENSG00000165379	tier1	-	-	31	0	0.00	35	52	59.77
LRRK1	0	genome.wustl.edu	37	15	101591974	101591974	+	Silent	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	15	101591974	101591974	G	T	SNP	LRRK1	ENST00000388948	human	ensembl	74_37	+1	known	silent	c.3498	p.P1166	0.000	NULL	pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,pfam_Leu-rich_rpt,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Small_GTPase,superfamily_Kinase-like_dom,superfamily_P-loop_NTPase,superfamily_Ankyrin_rpt-contain_dom,superfamily_WD40_repeat_dom,smart_Ankyrin_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Ankyrin_rpt-contain_dom,pfscan_Prot_kinase_dom	-	no_errors	LRRK1	HGNC	ENSG00000154237	tier1	-	-	27	0	0.00	28	16	36.36
MAGEB4	0	genome.wustl.edu	37	X	30261127	30261127	+	Missense_Mutation	SNP	T	T	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	X	30261127	30261127	T	G	SNP	MAGEB4	ENST00000378982	human	ensembl	74_37	+1	known	missense	c.875	p.V292G	0.000	pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	-	no_errors	MAGEB4	HGNC	ENSG00000120289	tier1	-	-	12	0	0.00	24	9	27.27
MAGEC1	0	genome.wustl.edu	37	X	140994796	140994796	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	X	140994796	140994796	C	T	SNP	MAGEC1	ENST00000285879	human	ensembl	74_37	+1	known	missense	c.1606	p.L536F	0.505	NULL	pfam_MAGE,pfscan_MAGE	-	no_errors	MAGEC1	HGNC	ENSG00000155495	tier1	-	-	16	0	0.00	35	40	53.33
MAP2	0	genome.wustl.edu	37	2	210594936	210594936	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	210594936	210594936	C	T	SNP	MAP2	ENST00000360351	human	ensembl	74_37	+1	known	missense	c.5299	p.H1767Y	1.000	NULL	pfam_MAP2_projctn,pfam_MAP_tubulin-bd_rpt	-	no_errors	MAP2	HGNC	ENSG00000078018	tier1	-	-	12	0	0.00	26	9	25.71
MC4R	0	genome.wustl.edu	37	18	58038634	58038634	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	18	58038634	58038634	T	A	SNP	MC4R	ENST00000299766	human	ensembl	74_37	-1	known	missense	c.949	p.I317F	1.000	prints_Melcrt_ACTH_rcpt,prints_Mcort_rcpt_4,prints_Melancort_rcpt	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Melcrt_ACTH_rcpt,prints_Mcort_rcpt_4,prints_GPCR_Rhodpsn,prints_Melancort_rcpt,prints_Cnbnoid_rcpt	-	no_errors	MC4R	HGNC	ENSG00000166603	tier1	-	-	14	0	0.00	19	22	53.66
MCOLN3	0	genome.wustl.edu	37	1	85499887	85499887	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	85499887	85499887	G	T	SNP	MCOLN3	ENST00000370589	human	ensembl	74_37	-1	known	missense	c.444	p.N148K	0.991	NULL	pfam_PKD1_2_channel	-	no_errors	MCOLN3	HGNC	ENSG00000055732	tier1	-	-	32	0	0.00	63	14	18.18
MLX	0	genome.wustl.edu	37	17	40720545	40720545	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	17	40720545	40720545	G	T	SNP	MLX	ENST00000246912	human	ensembl	74_37	+1	known	missense	c.299	p.G100V	1.000	NULL	pfam_bHLH_dom,superfamily_bHLH_dom,smart_bHLH_dom,pfscan_bHLH_dom	-	no_errors	MLX	HGNC	ENSG00000108788	tier1	-	-	29	0	0.00	55	21	27.63
MRPL38	0	genome.wustl.edu	37	17	73895597	73895597	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	17	73895597	73895597	C	T	SNP	MRPL38	ENST00000309352	human	ensembl	74_37	-1	known	missense	c.869	p.C290Y	1.000	superfamily_PtdEtn-bd_prot_PEBP	pfam_PtdEtn-bd_prot_PEBP,superfamily_PtdEtn-bd_prot_PEBP	-	no_errors	MRPL38	HGNC	ENSG00000204316	tier1	-	-	26	0	0.00	25	13	34.21
MUC16	0	genome.wustl.edu	37	19	9050193	9050193	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	19	9050193	9050193	T	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	missense	c.31438	p.K10480E	0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1	-	-	18	0	0.00	35	8	18.60
MUC16	0	genome.wustl.edu	37	19	9065422	9065423	+	Frame_Shift_Ins	INS	-	-	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	19	9065422	9065423	-	A	INS	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	frame_shift_ins	c.22024_22023	p.T7341fs	0.000:0.000	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	-	no_errors	MUC16	HGNC	ENSG00000181143	tier1			26	0	0.00	41	28	40.58
MUC4	0	genome.wustl.edu	37	3	195513906	195513906	+	Silent	SNP	T	T	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	3	195513906	195513906	T	G	SNP	MUC4	ENST00000463781	human	ensembl	74_37	-1	known	silent	c.4545	p.T1515	0.001	NULL	pfam_Nidogen_extracell_dom,pfam_AMOP,pfam_VWF_type-D,smart_Nidogen_extracell_dom,smart_AMOP,smart_VWF_type-D,smart_EG-like_dom,pfscan_AMOP,pfscan_EG-like_dom	-	no_errors	MUC4	HGNC	ENSG00000145113	tier1	rs200485723	-	15	0	0.00	18	6	25.00
MZT2B	0	genome.wustl.edu	37	2	130948069	130948069	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	130948069	130948069	G	T	SNP	MZT2B	ENST00000281871	human	ensembl	74_37	+1	known	missense	c.347	p.G116V	0.322	NULL	NULL	-	no_errors	MZT2B	HGNC	ENSG00000152082	tier1	-	-	37	0	0.00	59	8	11.94
NAF1	0	genome.wustl.edu	37	4	164061390	164061390	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	4	164061390	164061390	G	T	SNP	NAF1	ENST00000274054	human	ensembl	74_37	-1	known	missense	c.863	p.T288K	1.000	pfam_H/ACA_rnp_Gar1/Naf1	pfam_H/ACA_rnp_Gar1/Naf1,superfamily_Transl_B-barrel	-	no_errors	NAF1	HGNC	ENSG00000145414	tier1	-	-	38	0	0.00	68	5	6.85
NBEA	0	genome.wustl.edu	37	13	35926358	35926358	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	13	35926358	35926358	G	T	SNP	NBEA	ENST00000310336	human	ensembl	74_37	+1	known	missense	c.6077	p.S2026I	1.000	pfam_DUF1088	pfam_BEACH_dom,pfam_DUF1088,pfam_WD40_repeat,superfamily_BEACH_dom,superfamily_ConA-like_lec_gl_sf,superfamily_WD40_repeat_dom,superfamily_ARM-type_fold,smart_WD40_repeat,pfscan_BEACH_dom,pfscan_WD40_repeat_dom	-	no_errors	NBEA	HGNC	ENSG00000172915	tier1	-	-	27	0	0.00	19	3	13.64
NLRC5	0	genome.wustl.edu	37	16	57074572	57074572	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	16	57074572	57074572	C	A	SNP	NLRC5	ENST00000262510	human	ensembl	74_37	+1	known	missense	c.2881	p.L961I	0.010	NULL	pfam_Leu-rich_rpt,superfamily_P-loop_NTPase,smart_Leu-rich_rpt_RNase_inh_sub-typ,smart_Leu-rich_rpt_Cys-con_subtyp,pfscan_NACHT_NTPase	-	no_errors	NLRC5	HGNC	ENSG00000140853	tier1	-	-	14	0	0.00	31	6	16.22
OR11H1	0	genome.wustl.edu	37	22	16449141	16449141	+	Missense_Mutation	SNP	T	T	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	22	16449141	16449141	T	A	SNP	OR11H1	ENST00000252835	human	ensembl	74_37	-1	known	missense	c.664	p.I222F	0.122	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR11H1	HGNC	ENSG00000130538	tier1	-	-	23	0	0.00	45	12	21.05
OR51L1	0	genome.wustl.edu	37	11	5020730	5020730	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	11	5020730	5020730	G	A	SNP	OR51L1	ENST00000321543	human	ensembl	74_37	+1	known	missense	c.518	p.G173D	0.000	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Olfact_rcpt,prints_GPCR_Rhodpsn	-	no_errors	OR51L1	HGNC	ENSG00000176798	tier1	-	-	10	0	0.00	20	11	35.48
OR7E14P	0	genome.wustl.edu	37	11	17073832	17073832	+	RNA	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	11	17073832	17073832	G	A	SNP	OR7E14P	ENST00000530490	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.004	-	-	-	no_errors	OR7E14P	HGNC	ENSG00000184669	tier1	-	-	26	0	0.00	54	9	14.29
OR7E14P	0	genome.wustl.edu	37	11	17073884	17073884	+	RNA	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	11	17073884	17073884	G	A	SNP	OR7E14P	ENST00000530490	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.003	-	-	-	no_errors	OR7E14P	HGNC	ENSG00000184669	tier1	-	-	40	0	0.00	55	9	14.06
PARP12	0	genome.wustl.edu	37	7	139746766	139746766	+	Nonsense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	7	139746766	139746766	G	A	SNP	PARP12	ENST00000263549	human	ensembl	74_37	-1	known	nonsense	c.904	p.Q302*	1.000	pfscan_WWE-dom	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Znf_CCCH,smart_Znf_CCCH,pfscan_WWE-dom,pfscan_Poly(ADP-ribose)pol_cat_dom	-	no_errors	PARP12	HGNC	ENSG00000059378	tier1	-	-	41	0	0.00	65	4	5.80
PARP3	0	genome.wustl.edu	37	3	51976714	51976714	+	Silent	SNP	G	G	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	3	51976714	51976714	G	C	SNP	PARP3	ENST00000398755	human	ensembl	74_37	+1	known	silent	c.9	p.L3	0.000	NULL	pfam_Poly(ADP-ribose)pol_cat_dom,pfam_Poly(ADP-ribose)pol_reg_dom,pfam_WGR_domain,superfamily_Poly(ADP-ribose)pol_reg_dom,superfamily_WGR_domain,smart_WGR_domain,pfscan_Poly(ADP-ribose)pol_cat_dom,pfscan_Poly(ADP-ribose)pol_reg_dom	-	no_errors	PARP3	HGNC	ENSG00000041880	tier1	-	-	15	0	0.00	15	8	34.78
PCDH9	0	genome.wustl.edu	37	13	67802560	67802560	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	13	67802560	67802560	C	T	SNP	PCDH9	ENST00000377865	human	ensembl	74_37	-1	known	missense	c.13	p.D5N	1.000	NULL	pfam_Cadherin,pfam_Protocadherin,pfam_Cadherin_N,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	-	no_errors	PCDH9	HGNC	ENSG00000184226	tier1	-	-	33	0	0.00	41	17	29.31
PDK3	0	genome.wustl.edu	37	X	24517162	24517162	+	RNA	DEL	T	T	-			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	X	24517162	24517162	T	-	DEL	PDK3	ENST00000493226	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.012	-	-	-	no_errors	PDK3	HGNC	ENSG00000067992	tier1			21	0	0.00	35	4	10.26
PIN1P1	0	genome.wustl.edu	37	1	70385205	70385205	+	RNA	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	70385205	70385205	C	T	SNP	PIN1P1	ENST00000412108	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.979	-	-	-	no_errors	PIN1P1	HGNC	ENSG00000229359	tier1	-	-	29	0	0.00	61	13	17.57
PITX2	0	genome.wustl.edu	37	4	111539588	111539588	+	Missense_Mutation	SNP	G	G	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	4	111539588	111539588	G	C	SNP	PITX2	ENST00000306732	human	ensembl	74_37	-1	known	missense	c.668	p.S223C	1.000	pirsf_Homeobox_Pitx/unc30	pfam_Homeobox_dom,pfam_OAR_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pirsf_Homeobox_Pitx/unc30,pfscan_OAR_dom,pfscan_Homeobox_dom	-	no_errors	PITX2	HGNC	ENSG00000164093	tier1	-	-	21	0	0.00	25	27	51.92
PNISR	0	genome.wustl.edu	37	6	99860264	99860264	+	RNA	SNP	T	T	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	6	99860264	99860264	T	C	SNP	PNISR	ENST00000466057	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.983	-	-	-	no_errors	PNISR	HGNC	ENSG00000132424	tier1	-	-	30	0	0.00	59	16	21.33
POLB	0	genome.wustl.edu	37	8	42214742	42214742	+	Splice_Site	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	8	42214742	42214742	G	T	SNP	POLB	ENST00000265421	human	ensembl	74_37	+1	known	splice_site	c.477+1	e8+1	1.000	-	-	-	no_errors	POLB	HGNC	ENSG00000070501	tier1	-	-	47	0	0.00	76	4	5.00
PRICKLE1	0	genome.wustl.edu	37	12	42860064	42860064	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	12	42860064	42860064	C	T	SNP	PRICKLE1	ENST00000345127	human	ensembl	74_37	-1	known	missense	c.707	p.R236H	1.000	pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	pfam_PET_domain,pfam_Znf_LIM,smart_Znf_LIM,pfscan_Znf_LIM	-	no_errors	PRICKLE1	HGNC	ENSG00000139174	tier1	-	-	24	0	0.00	42	18	30.00
PRKAB2	0	genome.wustl.edu	37	1	146633344	146633344	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	146633344	146633344	G	A	SNP	PRKAB2	ENST00000254101	human	ensembl	74_37	-1	known	missense	c.688	p.L230F	1.000	pfam_AMP_prot_kin_bsu_interact-dom	pfam_AMP_prot_kin_bsu_interact-dom,superfamily_Ig_E-set	-	no_errors	PRKAB2	HGNC	ENSG00000131791	tier1	-	-	60	0	0.00	75	53	41.41
PRKAR2B	0	genome.wustl.edu	37	7	106797765	106797765	+	Frame_Shift_Del	DEL	T	T	-			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	7	106797765	106797765	T	-	DEL	PRKAR2B	ENST00000265717	human	ensembl	74_37	+1	known	frame_shift_del	c.1119	p.L374fs	1.000	pfam_cNMP-bd_dom,superfamily_cNMP-bd-like,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom	pfam_cNMP-bd_dom,pfam_cAMP_dep_PK_reg_su_I/II_a/b,superfamily_cNMP-bd-like,superfamily_cAMP_dep_PK_reg_su_I/II_a/b,smart_cAMP_dep_PK_reg_su_I/II_a/b,smart_cNMP-bd_dom,pirsf_cAMP_dep_PK_reg_su,pfscan_cNMP-bd_dom,prints_cAMP/cGMP_kin	-	no_errors	PRKAR2B	HGNC	ENSG00000005249	tier1			19	0	0.00	52	12	18.75
PRR3	0	genome.wustl.edu	37	6	30530332	30530332	+	RNA	SNP	C	C	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	6	30530332	30530332	C	A	SNP	PRR3	ENST00000481741	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.156	-	-	-	no_errors	PRR3	HGNC	ENSG00000204576	tier1	-	-	15	0	0.00	25	13	34.21
PTPN9	0	genome.wustl.edu	37	15	75763081	75763081	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	15	75763081	75763081	A	T	SNP	PTPN9	ENST00000306726	human	ensembl	74_37	-1	known	missense	c.1299	p.N433K	0.995	pfam_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_rcpt/non-rcpt,pfscan_Tyr_Pase_rcpt/non-rcpt	pfam_Tyr_Pase_rcpt/non-rcpt,pfam_CRAL-TRIO_dom,pfam_CRAL/TRIO_N_dom,superfamily_CRAL-TRIO_dom,superfamily_CRAL/TRIO_N_dom,smart_CRAL-TRIO_dom,smart_Tyr_Pase_rcpt/non-rcpt,smart_Tyr_Pase_cat,pfscan_CRAL-TRIO_dom,pfscan_Tyr/Dual-sp_Pase,pfscan_Tyr_Pase_rcpt/non-rcpt,prints_Tyr_Pase_rcpt/non-rcpt,prints_CRAL-bd_toc_tran	-	no_errors	PTPN9	HGNC	ENSG00000169410	tier1	-	-	45	0	0.00	70	13	15.66
RGPD1	0	genome.wustl.edu	37	2	87201286	87201286	+	Missense_Mutation	SNP	A	A	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	87201286	87201286	A	C	SNP	RGPD1	ENST00000398193	human	ensembl	74_37	+1	known	missense	c.1364	p.K455T	0.997	NULL	pfam_Ran_bind_dom,pfam_GRIP,pfam_TPR_2,pfam_TPR_1,superfamily_GRIP,smart_TPR_repeat,smart_Ran_bind_dom,smart_GRIP,pfscan_GRIP,pfscan_TPR_repeat,pfscan_TPR-contain_dom,pfscan_Ran_bind_dom	-	no_errors	RGPD1	HGNC	ENSG00000187627	tier1	-	-	35	0	0.00	78	9	10.34
SCARNA9	0	genome.wustl.edu	37	11	93454832	93454835	+	RNA	DEL	GTGT	GTGT	-			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	GTGT	GTGT					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	11	93454832	93454835	GTGT	-	DEL	SCARNA9	ENST00000530422	human	ensembl	74_37	+1	known	rna	NULL	NULL	0.007:0.008:0.006:0.000	-	-	-	no_errors	SCARNA9	HGNC	ENSG00000254911	tier1			17	0	0.00	26	4	13.33
SEC24B	0	genome.wustl.edu	37	4	110384393	110384393	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	4	110384393	110384393	A	T	SNP	SEC24B	ENST00000265175	human	ensembl	74_37	+1	known	missense	c.470	p.N157I	1.000	NULL	pfam_Sec23/24_trunk_dom,pfam_Sec23/24_helical_dom,pfam_Sec23_24_beta_S,pfam_Znf_Sec23_Sec24,pfam_Gelsolin_dom,superfamily_Sec23/24_helical_dom,superfamily_Znf_Sec23_Sec24	-	no_errors	SEC24B	HGNC	ENSG00000138802	tier1	-	-	13	0	0.00	11	12	52.17
SEMA3C	0	genome.wustl.edu	37	7	80427447	80427447	+	Silent	SNP	A	A	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	7	80427447	80427447	A	G	SNP	SEMA3C	ENST00000544525	human	ensembl	74_37	-1	known	silent	c.1146	p.I382	1.000	pfam_Semap_dom,superfamily_Semap_dom,smart_Semap_dom,pfscan_Semap_dom	pfam_Semap_dom,pfam_Ig_I-set,superfamily_Semap_dom,superfamily_Plexin-like_fold,smart_Semap_dom,smart_Plexin-like_fold,smart_Ig_sub,pfscan_Semap_dom,pfscan_Ig-like_dom	-	no_errors	SEMA3C	HGNC	ENSG00000075223	tier1	-	-	35	0	0.00	56	46	45.10
SHANK1	0	genome.wustl.edu	37	19	51189602	51189602	+	Silent	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	19	51189602	51189602	G	A	SNP	SHANK1	ENST00000391814	human	ensembl	74_37	-1	known	silent	c.2493	p.D831	0.998	NULL	pfam_Ankyrin_rpt,pfam_SAM_type1,pfam_SH3_2,pfam_SAM_2,pfam_PDZ,pfam_SH3_domain,superfamily_Ankyrin_rpt-contain_dom,superfamily_PDZ,superfamily_SH3_domain,superfamily_SAM/pointed,smart_Ankyrin_rpt,smart_SH3_domain,smart_PDZ,smart_SAM,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,pfscan_PDZ,pfscan_SAM,pfscan_SH3_domain	-	no_errors	SHANK1	HGNC	ENSG00000161681	tier1	-	-	17	0	0.00	22	10	31.25
SLC22A1	0	genome.wustl.edu	37	6	160577066	160577066	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	6	160577066	160577066	G	A	SNP	SLC22A1	ENST00000366963	human	ensembl	74_37	+1	known	missense	c.1558	p.A520T	0.001	pfam_Sub_transporter,superfamily_MFS_dom_general_subst_transpt,tigrfam_Orgcat_transp	pfam_Sub_transporter,pfam_MFS,superfamily_MFS_dom_general_subst_transpt,pfscan_MFS_dom,tigrfam_Orgcat_transp	-	no_errors	SLC22A1	HGNC	ENSG00000175003	tier1	-	-	25	0	0.00	47	21	30.88
SLC38A8	0	genome.wustl.edu	37	16	84070482	84070482	+	Silent	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	16	84070482	84070482	G	A	SNP	SLC38A8	ENST00000299709	human	ensembl	74_37	-1	known	silent	c.213	p.S71	0.532	pfam_AA_transpt_TM,pfam_Tryptophan/tyrosine_permease	pfam_AA_transpt_TM,pfam_Tryptophan/tyrosine_permease	-	no_errors	SLC38A8	HGNC	ENSG00000166558	tier1	rs149748570	-	38	0	0.00	49	19	27.94
SLC44A1	0	genome.wustl.edu	37	9	108147756	108147756	+	Silent	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	9	108147756	108147756	C	T	SNP	SLC44A1	ENST00000374720	human	ensembl	74_37	+1	known	silent	c.1923	p.V641	0.135	NULL	pfam_Choline_transptr-like	-	no_errors	SLC44A1	HGNC	ENSG00000070214	tier1	rs151307942	-	18	0	0.00	25	36	59.02
SLITRK3	0	genome.wustl.edu	37	3	164906571	164906571	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	3	164906571	164906571	C	T	SNP	SLITRK3	ENST00000241274	human	ensembl	74_37	-1	known	missense	c.2048	p.R683Q	0.961	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp,smart_Cys-rich_flank_reg_C	-	no_errors	SLITRK3	HGNC	ENSG00000121871	tier1	-	-	9	0	0.00	25	22	46.81
SNED1	0	genome.wustl.edu	37	2	242003535	242003535	+	Nonsense_Mutation	SNP	C	C	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	242003535	242003535	C	A	SNP	SNED1	ENST00000310397	human	ensembl	74_37	+1	known	nonsense	c.2592	p.C864*	0.910	smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,pfscan_EG-like_dom	pfam_EG-like_dom,pfam_Fibronectin_type3,pfam_Nidogen_extracell_dom,pfam_EGF_extracell,pfam_EGF-like_Ca-bd_dom,superfamily_Fibronectin_type3,superfamily_Sushi_SCR_CCP,smart_Nidogen_extracell_dom,smart_EG-like_dom,smart_EGF-like_Ca-bd_dom,smart_Sushi_SCR_CCP,smart_Fibronectin_type3,pfscan_EG-like_dom,pfscan_Fibronectin_type3,pfscan_Sushi_SCR_CCP	-	no_errors	SNED1	HGNC	ENSG00000162804	tier1	-	-	16	0	0.00	34	16	32.00
SRSF11	0	genome.wustl.edu	37	1	70716908	70716908	+	RNA	SNP	A	A	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	70716908	70716908	A	G	SNP	SRSF11	ENST00000461935	human	ensembl	74_37	+1	known	rna	NULL	NULL	1.000	-	-	-	no_errors	SRSF11	HGNC	ENSG00000116754	tier1	-	-	16	0	0.00	37	15	28.85
STOML2	0	genome.wustl.edu	37	9	35101143	35101143	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	9	35101143	35101143	T	C	SNP	STOML2	ENST00000356493	human	ensembl	74_37	-1	known	missense	c.713	p.N238S	1.000	NULL	pfam_Band_7,smart_Band_7,prints_Stomatin	-	no_errors	STOML2	HGNC	ENSG00000165283	tier1	-	-	20	0	0.00	14	6	30.00
TADA1	0	genome.wustl.edu	37	1	166825867	166825867	+	RNA	SNP	A	A	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	166825867	166825867	A	G	SNP	TADA1	ENST00000467021	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.144	-	-	-	no_errors	TADA1	HGNC	ENSG00000152382	tier1	-	-	30	0	0.00	46	24	34.29
TAS2R50	0	genome.wustl.edu	37	12	11138694	11138694	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	12	11138694	11138694	G	A	SNP	TAS2R50	ENST00000506868	human	ensembl	74_37	-1	known	missense	c.766	p.R256W	0.000	pfam_TAS2_rcpt	pfam_TAS2_rcpt	-	no_errors	TAS2R50	HGNC	ENSG00000212126	tier1	-	-	24	0	0.00	44	10	18.52
TBX4	0	genome.wustl.edu	37	17	59560599	59560599	+	Missense_Mutation	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	17	59560599	59560599	C	T	SNP	TBX4	ENST00000393853	human	ensembl	74_37	+1	known	missense	c.1363	p.R455W	0.998	NULL	pfam_TF_T-box,superfamily_p53-like_TF_DNA-bd,smart_TF_T-box,pfscan_TF_T-box,prints_TF_T-box	-	no_errors	TBX4	HGNC	ENSG00000121075	tier1	-	-	14	0	0.00	10	10	50.00
TERT	0	genome.wustl.edu	37	5	1272327	1272327	+	Silent	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	5	1272327	1272327	C	T	SNP	TERT	ENST00000310581	human	ensembl	74_37	-1	known	silent	c.2355	p.P785	0.000	pfam_RVT,pfscan_RVT	pfam_Telomerase_RBD,pfam_RVT,smart_Telomerase_RBD,pfscan_RVT,prints_Telomerase_RT	-	no_errors	TERT	HGNC	ENSG00000164362	tier1	-	-	19	0	0.00	54	22	28.95
TMEM182	0	genome.wustl.edu	37	2	103378750	103378750	+	Missense_Mutation	SNP	T	T	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	103378750	103378750	T	G	SNP	TMEM182	ENST00000412401	human	ensembl	74_37	+1	known	missense	c.74	p.F25C	1.000	NULL	NULL	-	no_errors	TMEM182	HGNC	ENSG00000170417	tier1	-	-	19	0	0.00	35	31	46.97
TNFSF12	0	genome.wustl.edu	37	17	7456910	7456910	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	17	7456910	7456910	G	T	SNP	TNFSF12	ENST00000322272	human	ensembl	74_37	+1	known	missense	c.380	p.G127V	0.000	NULL	NULL	-	no_errors	TNFSF12	HGNC	ENSG00000239697	tier1	-	-	35	0	0.00	65	4	5.80
TRPC4	0	genome.wustl.edu	37	13	38211399	38211399	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	13	38211399	38211399	G	T	SNP	TRPC4	ENST00000379681	human	ensembl	74_37	-1	known	missense	c.2590	p.Q864K	0.848	NULL	pfam_Ion_trans_dom,pfam_TRP_dom,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,prints_TRPC4_channel,prints_TRPC_channel,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,tigrfam_TRP_channel	-	no_errors	TRPC4	HGNC	ENSG00000133107	tier1	-	-	35	0	0.00	28	21	42.86
TRPM4	0	genome.wustl.edu	37	19	49693513	49693513	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	19	49693513	49693513	A	T	SNP	TRPM4	ENST00000252826	human	ensembl	74_37	+1	known	missense	c.2068	p.I690F	0.162	NULL	pfam_Ion_trans_dom	-	no_errors	TRPM4	HGNC	ENSG00000130529	tier1	-	-	18	0	0.00	37	7	15.91
TTN	0	genome.wustl.edu	37	2	179456788	179456788	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	179456788	179456788	A	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.52139	p.L17380P	1.000	pfam_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_Fibronectin_type3,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	17	0	0.00	58	15	20.55
TTN	0	genome.wustl.edu	37	2	179482140	179482140	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	179482140	179482140	A	G	SNP	TTN	ENST00000342992	human	ensembl	74_37	-1	known	missense	c.39968	p.I13323T	0.997	pfam_Fibronectin_type3,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Fibronectin_type3,pfscan_Fibronectin_type3	pfam_Ig_I-set,pfam_Fibronectin_type3,pfam_Immunoglobulin,pfam_Ig_V-set,pfam_Titin_Z,pfam_PPAK_motif,pfam_Prot_kinase_dom,pfam_Ser-Thr/Tyr_kinase_cat_dom,superfamily_Kinase-like_dom,superfamily_Fibronectin_type3,superfamily_Calpain_domain_III,superfamily_RNaseH-like_dom,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Fibronectin_type3,smart_Ser/Thr_dual-sp_kinase_dom,smart_Tyr_kinase_cat_dom,pfscan_Fibronectin_type3,pfscan_Prot_kinase_dom,pfscan_Ig-like_dom	-	no_errors	TTN	HGNC	ENSG00000155657	tier1	-	-	9	0	0.00	27	8	22.86
UBE2D3	0	genome.wustl.edu	37	4	103747741	103747741	+	RNA	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	4	103747741	103747741	G	T	SNP	UBE2D3	ENST00000513098	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.905	-	-	-	no_errors	UBE2D3	HGNC	ENSG00000109332	tier1	-	-	9	0	0.00	16	4	20.00
UBE3D	0	genome.wustl.edu	37	6	83732251	83732251	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	6	83732251	83732251	T	C	SNP	UBE3D	ENST00000369747	human	ensembl	74_37	-1	known	missense	c.767	p.Q256R	0.997	pfam_UBQ-conj_enz_E2-bd_prot	pfam_UBQ-conj_enz_E2-bd_prot	-	no_errors	UBE3D	HGNC	ENSG00000118420	tier1	-	-	23	0	0.00	50	21	29.58
USP24	0	genome.wustl.edu	37	1	55595244	55595244	+	Silent	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	55595244	55595244	G	A	SNP	USP24	ENST00000407756	human	ensembl	74_37	-1	known	silent	c.3061	p.L1021	0.996	NULL	pfam_Peptidase_C19/C67,superfamily_UBA-like,superfamily_ARM-type_fold,pfscan_UBA/transl_elong_EF1B_N_euk,pfscan_Peptidase_C19/C67	-	no_errors	USP24	HGNC	ENSG00000162402	tier1	-	-	38	0	0.00	46	8	14.81
VAPA	0	genome.wustl.edu	37	18	9931846	9931846	+	Missense_Mutation	SNP	G	G	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	18	9931846	9931846	G	T	SNP	VAPA	ENST00000340541	human	ensembl	74_37	+1	known	missense	c.119	p.R40L	1.000	pfam_MSP_dom,superfamily_PapD-like,pirsf_Vesicle-associated_membrane,pfscan_MSP_dom	pfam_MSP_dom,superfamily_PapD-like,pirsf_Vesicle-associated_membrane,pfscan_MSP_dom	-	no_errors	VAPA	HGNC	ENSG00000101558	tier1	-	-	26	0	0.00	44	33	42.86
VPS52	0	genome.wustl.edu	37	6	33218515	33218515	+	RNA	SNP	C	C	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	6	33218515	33218515	C	A	SNP	VPS52	ENST00000478934	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.045	-	-	-	no_errors	VPS52	HGNC	ENSG00000223501	tier1	-	-	11	0	0.00	22	16	42.11
VPS9D1	0	genome.wustl.edu	37	16	89777128	89777128	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	16	89777128	89777128	T	C	SNP	VPS9D1	ENST00000389386	human	ensembl	74_37	-1	known	missense	c.1124	p.D375G	0.965	NULL	pfam_VPS9,smart_VPS9_subgr,pfscan_VPS9	-	no_errors	VPS9D1	HGNC	ENSG00000075399	tier1	-	-	42	0	0.00	57	22	27.85
VWF	0	genome.wustl.edu	37	12	6128145	6128145	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	12	6128145	6128145	G	A	SNP	VWF	ENST00000261405	human	ensembl	74_37	-1	known	missense	c.4439	p.P1480L	0.432	pirsf_VWF	pirsf_VWF,pfam_VWF_type-D,pfam_VWF_A,pfam_Unchr_dom_Cys-rich,pfam_TIL_dom,pfam_VWF_C,superfamily_TIL_dom,smart_VWF_type-D,smart_Unchr_dom_Cys-rich,smart_VWC_out,smart_VWF_C,smart_VWF_A,smart_Cys_knot_C,pfscan_Cys_knot_C,pfscan_VWF_A,pfscan_VWF_C	-	no_errors	VWF	HGNC	ENSG00000110799	tier1	-	-	17	0	0.00	40	23	36.51
XIRP2	0	genome.wustl.edu	37	2	168107984	168107984	+	Missense_Mutation	SNP	A	A	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	2	168107984	168107984	A	C	SNP	XIRP2	ENST00000295237	human	ensembl	74_37	+1	known	missense	c.10082	p.N3361T	0.010	NULL	pfam_Actin-binding_Xin_repeat	-	no_errors	XIRP2	HGNC	ENSG00000163092	tier1	-	-	11	0	0.00	32	6	15.79
ZBTB46	0	genome.wustl.edu	37	20	62421604	62421604	+	Silent	SNP	C	C	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	20	62421604	62421604	C	T	SNP	ZBTB46	ENST00000245663	human	ensembl	74_37	-1	known	silent	c.507	p.P169	0.137	NULL	pfam_BTB_POZ,pfam_DUF3342,pfam_Znf_C2H2,superfamily_BTB/POZ_fold,smart_BTB/POZ-like,smart_Znf_C2H2-like,pfscan_BTB/POZ-like,pfscan_Znf_C2H2	-	no_errors	ZBTB46	HGNC	ENSG00000130584	tier1	-	-	8	0	0.00	14	5	26.32
ZFC3H1	0	genome.wustl.edu	37	12	72024395	72024395	+	Missense_Mutation	SNP	T	T	C			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	12	72024395	72024395	T	C	SNP	ZFC3H1	ENST00000378743	human	ensembl	74_37	-1	known	missense	c.3709	p.I1237V	1.000	NULL	pfam_Putative_zinc-finger_domain,smart_HAT,pfscan_TPR-contain_dom	-	no_errors	ZFC3H1	HGNC	ENSG00000133858	tier1	-	-	32	0	0.00	59	27	31.40
ZMYND12	0	genome.wustl.edu	37	1	42921632	42921632	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	1	42921632	42921632	G	A	SNP	ZMYND12	ENST00000372565	human	ensembl	74_37	-1	known	missense	c.37	p.R13C	1.000	NULL	pfam_Znf_MYND,pfscan_Znf_MYND	-	no_errors	ZMYND12	HGNC	ENSG00000066185	tier1	-	-	12	0	0.00	22	10	31.25
ZNF160	0	genome.wustl.edu	37	19	53571447	53571448	+	Frame_Shift_Ins	INS	-	-	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	19	53571447	53571448	-	A	INS	ZNF160	ENST00000418871	human	ensembl	74_37	-1	known	frame_shift_ins	c.2340_2339	p.M780fs	0.000:0.001	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF160	HGNC	ENSG00000170949	tier1			39	0	0.00	65	17	20.73
ZNF268	0	genome.wustl.edu	37	12	133780251	133780251	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	12	133780251	133780251	G	A	SNP	ZNF268	ENST00000228289	human	ensembl	74_37	+1	known	missense	c.1979	p.G660E	0.775	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF268	HGNC	ENSG00000090612	tier1	-	-	19	0	0.00	42	9	17.65
ZNF460	0	genome.wustl.edu	37	19	57802649	57802649	+	Missense_Mutation	SNP	A	A	T			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	19	57802649	57802649	A	T	SNP	ZNF460	ENST00000360338	human	ensembl	74_37	+1	known	missense	c.740	p.N247I	0.952	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF460	HGNC	ENSG00000197714	tier1	-	-	18	0	0.00	20	18	47.37
ZNF587	0	genome.wustl.edu	37	19	58371221	58371221	+	Missense_Mutation	SNP	A	A	G			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	19	58371221	58371221	A	G	SNP	ZNF587	ENST00000339656	human	ensembl	74_37	+1	known	missense	c.1441	p.I481V	0.000	smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	-	no_errors	ZNF587	HGNC	ENSG00000198466	tier1	-	-	28	0	0.00	49	36	42.35
ZNF70	0	genome.wustl.edu	37	22	24086011	24086011	+	Missense_Mutation	SNP	C	C	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	22	24086011	24086011	C	A	SNP	ZNF70	ENST00000341976	human	ensembl	74_37	-1	known	missense	c.1317	p.K439N	0.902	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	-	no_errors	ZNF70	HGNC	ENSG00000187792	tier1	-	-	20	0	0.00	25	9	26.47
ZWILCH	0	genome.wustl.edu	37	15	66821208	66821208	+	Missense_Mutation	SNP	G	G	A			TCGA-VR-AA7I-01A-11D-A403-09	TCGA-VR-AA7I-10A-01D-A403-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	442b99f1-cb13-4dfa-a95a-43b5dac87be9	2571d3c1-c102-40f2-9dbc-875797c2268e	15	66821208	66821208	G	A	SNP	ZWILCH	ENST00000307897	human	ensembl	74_37	+1	known	missense	c.988	p.A330T	0.686	pfam_RZZ-complex_zwilch	pfam_RZZ-complex_zwilch	-	no_errors	ZWILCH	HGNC	ENSG00000174442	tier1	-	-	8	0	0.00	30	8	20.51
