Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	rsID	rsID_ref_var_alleles	CAF	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumor_var_reads	tumor_vaf	normal_ref_reads_val	normal_var_reads_val	normal_vaf_val	tumor_ref_reads_val	tumor_var_reads_val	tumor_vaf_val
POTEF	0	genome.wustl.edu	37	2	130832171	130832171	+	Silent	SNP	G	G	A			TCGA-3T-AA9L-01A-11D-A423-09	TCGA-3T-AA9L-10A-01D-A426-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	879f5cd5-bdc4-4460-91ac-c66e3384c560	06f65dbf-dbaf-4c39-8ce5-7eb9a3c8aac4	2	130832171	130832171	G	A	SNP	POTEF	ENST00000357462	human	ensembl	74_37	-1	known	silent	c.2874	p.P958	1	pfam_Actin-related,smart_Actin-related	pfam_Actin-related,pfam_Ankyrin_rpt,superfamily_Ankyrin_rpt-contain_dom,smart_Ankyrin_rpt,smart_Actin-related,pfscan_Ankyrin_rpt,pfscan_Ankyrin_rpt-contain_dom,prints_Actin-related	0	no_errors	0	0	0	31	1	3.12	30	7	18.42	0	0	0.00	0	0	0.00
LOC101929676	0	genome.wustl.edu	37	4	119552902	119552902	+	RNA	SNP	C	C	G			TCGA-3T-AA9L-01A-11D-A423-09	TCGA-3T-AA9L-10A-01D-A426-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	879f5cd5-bdc4-4460-91ac-c66e3384c560	06f65dbf-dbaf-4c39-8ce5-7eb9a3c8aac4	4	119552902	119552902	C	G	SNP	LOC101929676	ENST00000567913	human	ensembl	74_37	1	known	rna	NULL	NULL	0.461	0	0	0	no_errors	0	0	0	20	0	0	12	3	20	0	0	0.00	1	0	0.00
ZNF506	0	genome.wustl.edu	37	19	19905796	19905796	+	Silent	SNP	A	A	G			TCGA-3T-AA9L-01A-11D-A423-09	TCGA-3T-AA9L-10A-01D-A426-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	879f5cd5-bdc4-4460-91ac-c66e3384c560	06f65dbf-dbaf-4c39-8ce5-7eb9a3c8aac4	19	19905796	19905796	A	G	SNP	ZNF506	ENST00000443905	human	ensembl	74_37	-1	known	silent	c.900	p.L300	0.01	pfam_Znf_C2H2,smart_Znf_C2H2-like,pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	0	no_errors	0	0	0	58	0	0	53	4	7.02	2	0	0.00	6	0	0.00
VPS9D1	0	genome.wustl.edu	37	16	89777305	89777305	+	Frame_Shift_Del	DEL	G	G	-			TCGA-3T-AA9L-01A-11D-A423-09	TCGA-3T-AA9L-10A-01D-A426-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	879f5cd5-bdc4-4460-91ac-c66e3384c560	06f65dbf-dbaf-4c39-8ce5-7eb9a3c8aac4	16	89777305	89777305	G	0	DEL	VPS9D1	ENST00000389386	human	ensembl	74_37	-1	known	frame_shift_del	c.947	p.P316fs	0.668	NULL	pfam_VPS9,smart_VPS9_subgr,pfscan_VPS9	0	no_errors	0	0	0	12	0	0	4	2	33.33	1	0	0.00	5	0	0.00
MAP2K2	0	genome.wustl.edu	37	19	4123888	4123890	+	RNA	DEL	CGG	CGG	-			TCGA-3T-AA9L-01A-11D-A423-09	TCGA-3T-AA9L-10A-01D-A426-09	CGG	CGG					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	879f5cd5-bdc4-4460-91ac-c66e3384c560	06f65dbf-dbaf-4c39-8ce5-7eb9a3c8aac4	19	4123888	4123890	CGG	0	DEL	MAP2K2	ENST00000599345	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.995:0.997:0.998	0	0	0	no_errors	0	0	0	34	0	0	22	2	8.33	2	0	0.00	1	0	0.00
MCM3AP-AS1	0	genome.wustl.edu	37	21	47662900	47662900	+	RNA	DEL	A	A	-			TCGA-3T-AA9L-01A-11D-A423-09	TCGA-3T-AA9L-10A-01D-A426-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	879f5cd5-bdc4-4460-91ac-c66e3384c560	06f65dbf-dbaf-4c39-8ce5-7eb9a3c8aac4	21	47662900	47662900	A	0	DEL	MCM3AP-AS1	ENST00000421927	human	ensembl	74_37	1	known	rna	NULL	NULL	0	0	0	0	no_errors	rs56371413	CA->C	0	11	0	0	8	6	42.86	0	0	0.00	0	0	0.00
