Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	rsID	rsID_ref_var_alleles	CAF	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumor_var_reads	tumor_vaf	normal_ref_reads_val	normal_var_reads_val	normal_vaf_val	tumor_ref_reads_val	tumor_var_reads_val	tumor_vaf_val
ADORA1	0	genome.wustl.edu	37	1	203134442	203134442	+	Nonsense_Mutation	SNP	G	G	A			TCGA-4V-A9QW-01A-11D-A423-09	TCGA-4V-A9QW-10A-01D-A426-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	83dbb5b1-f9bf-449b-971b-8b7a19dd5c65	78e453be-f5fd-42eb-b9c3-0a08f37da1a1	1	203134442	203134442	G	A	SNP	ADORA1	ENST00000309502	human	ensembl	74_37	1	known	nonsense	c.395	p.W132*	1	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_GPCR_Rhodpsn	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfscan_GPCR_Rhodpsn_7TM,prints_Adenosn_rcpt,prints_GPCR_Rhodpsn,prints_Adeno_A1_rcpt	0	no_errors	0	0	0	66	0	0	68	6	8.11	146	1	0.68	190	13	6.37
SNHG5	0	genome.wustl.edu	37	6	86387084	86387084	+	RNA	SNP	A	A	G			TCGA-4V-A9QW-01A-11D-A423-09	TCGA-4V-A9QW-10A-01D-A426-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	83dbb5b1-f9bf-449b-971b-8b7a19dd5c65	78e453be-f5fd-42eb-b9c3-0a08f37da1a1	6	86387084	86387084	A	G	SNP	SNHG5	ENST00000384338	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.942	0	0	0	no_errors	0	0	0	114	0	0	89	14	13.59	179	0	0.00	221	14	5.96
GTF2I	0	genome.wustl.edu	37	7	74146970	74146970	+	Missense_Mutation	SNP	T	T	A			TCGA-4V-A9QW-01A-11D-A423-09	TCGA-4V-A9QW-10A-01D-A426-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	83dbb5b1-f9bf-449b-971b-8b7a19dd5c65	78e453be-f5fd-42eb-b9c3-0a08f37da1a1	7	74146970	74146970	T	A	SNP	GTF2I	ENST00000324896	human	ensembl	74_37	1	known	missense	c.1271	p.L424H	1	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	0	no_errors	0	0	0	341	0	0	319	33	9.38	130	0	0.00	136	19	12.26
IGF2BP1	0	genome.wustl.edu	37	17	47123348	47123348	+	Missense_Mutation	SNP	G	G	A			TCGA-4V-A9QW-01A-11D-A423-09	TCGA-4V-A9QW-10A-01D-A426-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	83dbb5b1-f9bf-449b-971b-8b7a19dd5c65	78e453be-f5fd-42eb-b9c3-0a08f37da1a1	17	47123348	47123348	G	A	SNP	IGF2BP1	ENST00000290341	human	ensembl	74_37	1	known	missense	c.1492	p.A498T	1	pfam_KH_dom_type_1,smart_KH_dom,pfscan_KH_dom_type_1	pfam_KH_dom_type_1,pfam_RRM_dom,smart_RRM_dom,smart_KH_dom,pfscan_KH_dom_type_1,pfscan_RRM_dom	0	no_errors	0	0	0	43	0	0	50	7	12.28	193	1	0.52	183	25	12.02
DSG1	0	genome.wustl.edu	37	18	28916466	28916466	+	Silent	SNP	T	T	C			TCGA-4V-A9QW-01A-11D-A423-09	TCGA-4V-A9QW-10A-01D-A426-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	83dbb5b1-f9bf-449b-971b-8b7a19dd5c65	78e453be-f5fd-42eb-b9c3-0a08f37da1a1	18	28916466	28916466	T	C	SNP	DSG1	ENST00000257192	human	ensembl	74_37	1	known	silent	c.1155	p.F385	0.944	superfamily_Cadherin-like,pfscan_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Desmoglein,prints_Cadherin,prints_Desmosomal_cadherin	0	no_errors	0	0	0	90	0	0	86	8	8.51	314	0	0.00	327	20	5.76
FAM155B	0	genome.wustl.edu	37	X	68725179	68725181	+	In_Frame_Del	DEL	CTG	CTG	-			TCGA-4V-A9QW-01A-11D-A423-09	TCGA-4V-A9QW-10A-01D-A426-09	CTG	CTG	CTG	-	CTG	CTG	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	83dbb5b1-f9bf-449b-971b-8b7a19dd5c65	78e453be-f5fd-42eb-b9c3-0a08f37da1a1	X	68725179	68725181	CTG	0	DEL	FAM155B	ENST00000252338	human	ensembl	74_37	1	known	in_frame_del	c.54_56	p.C22in_frame_del	1.000:1.000:1.000	NULL	NULL	0	no_errors	rs374286243	TCTG->T	0	8	0	0	4	2	33.33	9	0	0.00	13	2	13.33
ENSG00000221130	0	genome.wustl.edu	37	11	88845962	88845963	+	RNA	INS	-	-	AT			TCGA-4V-A9QW-01A-11D-A423-09	TCGA-4V-A9QW-10A-01D-A426-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	83dbb5b1-f9bf-449b-971b-8b7a19dd5c65	78e453be-f5fd-42eb-b9c3-0a08f37da1a1	11	88845962	88845963	0	AT	INS	ENSG00000221130	ENST00000408203	human	ensembl	74_37	1	novel	rna	NULL	NULL	0.012:0.016	0	0	0	no_errors	rs201570179	C->CAT	0	17	1	5.56	47	16	25.4	0	0	0.00	0	0	0.00
