Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	rsID	rsID_ref_var_alleles	CAF	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumor_var_reads	tumor_vaf	normal_ref_reads_val	normal_var_reads_val	normal_vaf_val	tumor_ref_reads_val	tumor_var_reads_val	tumor_vaf_val
MAGEB18	0	genome.wustl.edu	37	X	26157793	26157793	+	Missense_Mutation	SNP	G	G	A			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	X	26157793	26157793	G	A	SNP	MAGEB18	ENST00000325250	human	ensembl	74_37	1	known	missense	c.691	p.D231N	0.136	pfam_MAGE,pfscan_MAGE	pfam_MAGE,pfam_Melanoma_ass_antigen_N,pfscan_MAGE	0	no_errors	0	0	0	32	0	0	17	15	46.88	113	0	0.00	71	57	44.53
FAM73A	0	genome.wustl.edu	37	1	78332037	78332037	+	Silent	SNP	T	T	C			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	1	78332037	78332037	T	C	SNP	FAM73A	ENST00000370791	human	ensembl	74_37	1	known	silent	c.1524	p.S508	1	pfam_DUF2217	pfam_DUF2217	0	no_errors	0	0	0	129	0	0	87	21	19.44	262	0	0.00	193	71	26.89
RAB7L1	0	genome.wustl.edu	37	1	205739888	205739888	+	Missense_Mutation	SNP	T	T	C			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	1	205739888	205739888	T	C	SNP	RAB7L1	ENST00000235932	human	ensembl	74_37	-1	known	missense	c.473	p.E158G	1	pfam_Small_GTPase,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_Gtr1_RagA,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_Ran_GTPase,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	0	no_errors	0	0	0	30	0	0	14	14	50	293	0	0.00	175	137	43.77
LBH	0	genome.wustl.edu	37	2	30480360	30480360	+	Missense_Mutation	SNP	T	T	C			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	2	30480360	30480360	T	C	SNP	LBH	ENST00000395323	human	ensembl	74_37	1	known	missense	c.191	p.I64T	1	pirsf_LBH,prints_LBH	pirsf_LBH,prints_LBH	0	no_errors	0	0	0	16	0	0	16	6	27.27	136	0	0.00	98	31	23.66
SCN1A	0	genome.wustl.edu	37	2	166903446	166903446	+	Missense_Mutation	SNP	A	A	G			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	2	166903446	166903446	A	G	SNP	SCN1A	ENST00000303395	human	ensembl	74_37	-1	known	missense	c.1211	p.V404A	1	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_DUF3451,pfam_Na_trans_assoc,pfam_PKD1_2_channel,prints_Na_channel_a1su,prints_Na_channel_asu,prints_PKD_2	0	no_errors	0	0	0	88	0	0	58	12	17.14	121	0	0.00	87	28	24.35
CCDC141	0	genome.wustl.edu	37	2	179742828	179742828	+	Missense_Mutation	SNP	C	C	G			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	2	179742828	179742828	C	G	SNP	CCDC141	ENST00000420890	human	ensembl	74_37	-1	known	missense	c.1762	p.E588Q	0	NULL	pfam_Ig_I-set,pfam_Spectrin_repeat,smart_Ig_sub,smart_Ig_sub2,pfscan_Ig-like_dom	0	no_errors	0	0	0	45	0	0	18	6	25	244	0	0.00	174	50	22.12
SPHKAP	0	genome.wustl.edu	37	2	228855819	228855819	+	Missense_Mutation	SNP	C	C	T			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	2	228855819	228855819	C	T	SNP	SPHKAP	ENST00000392056	human	ensembl	74_37	-1	known	missense	c.4856	p.C1619Y	1	pfam_AKAP_110_C	pfam_AKAP_110_C	0	no_errors	0	0	0	31	0	0	18	11	37.93	82	0	0.00	66	11	14.29
PROS1	0	genome.wustl.edu	37	3	93595864	93595864	+	Missense_Mutation	SNP	C	C	G			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	3	93595864	93595864	C	G	SNP	PROS1	ENST00000394236	human	ensembl	74_37	-1	known	missense	c.1816	p.V606L	0.591	pfam_Laminin_G,superfamily_ConA-like_lec_gl_sf,smart_Laminin_G,pfscan_Laminin_G	pfam_Laminin_G,pfam_EGF-like_Ca-bd_dom,pfam_GLA_domain,pfam_EG-like_dom,superfamily_ConA-like_lec_gl_sf,superfamily_GLA_domain,smart_GLA_domain,smart_EGF-like_Ca-bd_dom,smart_EG-like_dom,smart_Laminin_G,pfscan_EG-like_dom,pfscan_GLA_domain,pfscan_Laminin_G,prints_GLA_domain	0	no_errors	0	0	0	123	0	0	66	23	25.84	92	0	0.00	46	18	28.12
LRRC66	0	genome.wustl.edu	37	4	52883540	52883540	+	Silent	SNP	C	C	G			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	4	52883540	52883540	C	G	SNP	LRRC66	ENST00000343457	human	ensembl	74_37	-1	known	silent	c.240	p.T80	0.001	NULL	pfam_Leu-rich_rpt,smart_Leu-rich_rpt_typical-subtyp	0	no_errors	0	0	0	54	0	0	47	15	24.19	312	0	0.00	213	71	25.00
NDUFS6	0	genome.wustl.edu	37	5	1814659	1814659	+	Silent	SNP	G	G	A			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	5	1814659	1814659	G	A	SNP	NDUFS6	ENST00000469176	human	ensembl	74_37	1	putative	silent	c.393	p.L131	0	NULL	pfam_Znf_CHCC	0	no_errors	0	0	0	23	0	0	14	9	39.13	110	0	0.00	90	35	28.00
CLIP2	0	genome.wustl.edu	37	7	73803544	73803544	+	Missense_Mutation	SNP	C	C	G			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	7	73803544	73803544	C	G	SNP	CLIP2	ENST00000223398	human	ensembl	74_37	1	known	missense	c.2675	p.S892W	0.998	NULL	pfam_CAP-Gly_domain,superfamily_CAP-Gly_domain,superfamily_t-SNARE,pfscan_CAP-Gly_domain	0	no_errors	0	0	0	30	0	0	39	8	17.02	61	0	0.00	30	5	14.29
IMPA1	0	genome.wustl.edu	37	8	82593786	82593786	+	Missense_Mutation	SNP	G	G	C			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	8	82593786	82593786	G	C	SNP	IMPA1	ENST00000449740	human	ensembl	74_37	-1	known	missense	c.187	p.P63A	1	NULL	pfam_Inositol_monophosphatase,prints_Inositol_monoPase_Li-sen,prints_Inositol_monophosphatase	0	no_errors	0	0	0	79	0	0	26	9	25.71	126	0	0.00	118	34	22.37
TRPM3	0	genome.wustl.edu	37	9	73736100	73736100	+	Silent	SNP	A	A	T			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	A	A	A	T	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	9	73736100	73736100	A	T	SNP	TRPM3	ENST00000377110	human	ensembl	74_37	-1	known	silent	c.171	p.L57	0.999	NULL	pfam_Ion_trans_dom	0	no_errors	0	0	0	23	0	0	19	10	34.48	206	0	0.00	149	40	21.16
FLJ46361	0	genome.wustl.edu	37	10	124545544	124545544	+	RNA	SNP	C	C	A			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	10	124545544	124545544	C	A	SNP	FLJ46361	ENST00000439464	human	ensembl	74_37	1	known	rna	NULL	NULL	0.116	0	0	0	no_errors	0	0	0	95	0	0	54	17	23.94	194	1	0.51	137	32	18.93
BIRC3	0	genome.wustl.edu	37	11	102198822	102198822	+	Silent	SNP	C	C	A			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	11	102198822	102198822	C	A	SNP	BIRC3	ENST00000263464	human	ensembl	74_37	1	known	silent	c.993	p.I331	0.002	NULL	pfam_BIR,pfam_CARD,superfamily_DEATH-like_dom,smart_BIR,smart_CARD,smart_Znf_RING,pfscan_CARD,pfscan_BIR,pfscan_Znf_RING	0	no_errors	0	0	0	76	0	0	37	19	33.93	356	0	0.00	200	70	25.93
KHNYN	0	genome.wustl.edu	37	14	24901148	24901148	+	Silent	SNP	C	C	G			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	14	24901148	24901148	C	G	SNP	KHNYN	ENST00000251343	human	ensembl	74_37	1	known	silent	c.681	p.P227	0.001	NULL	pfam_RNase_Zc3h12	0	no_errors	0	0	0	30	0	0	17	5	22.73	149	0	0.00	88	23	20.72
CD276	0	genome.wustl.edu	37	15	73994736	73994736	+	Nonsense_Mutation	SNP	C	C	T			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	15	73994736	73994736	C	T	SNP	CD276	ENST00000318443	human	ensembl	74_37	1	known	nonsense	c.220	p.Q74*	1	pfam_Ig_V-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,pfscan_Ig-like_dom	pfam_Ig_V-set,pfam_CD80_C2-set,pfam_Ig_C1-set,smart_Ig_sub,smart_Ig_sub2,smart_Ig_V-set_subgr,smart_Ig_C1-set,pfscan_Ig-like_dom	0	no_errors	0	0	0	24	0	0	18	9	33.33	16	0	0.00	12	2	14.29
CHD9	0	genome.wustl.edu	37	16	53260382	53260382	+	Missense_Mutation	SNP	T	T	G			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	16	53260382	53260382	T	G	SNP	CHD9	ENST00000398510	human	ensembl	74_37	1	known	missense	c.2001	p.N667K	0.977	NULL	pfam_SNF2_N,pfam_BRK_domain,pfam_Chromo_domain,pfam_Helicase_C,pfam_DNA/RNA_helicase_DEAD/DEAH_N,superfamily_P-loop_NTPase,superfamily_Chromodomain-like,smart_Chromo_domain/shadow,smart_Helicase_ATP-bd,smart_Helicase_C,smart_BRK_domain,pfscan_Helicase_ATP-bd,pfscan_Helicase_C,pfscan_Chromo_domain/shadow	0	no_errors	0	0	0	140	0	0	67	23	25.56	268	0	0.00	161	61	27.23
ACOX1	0	genome.wustl.edu	37	17	73947523	73947523	+	Silent	SNP	A	A	C			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	17	73947523	73947523	A	C	SNP	ACOX1	ENST00000293217	human	ensembl	74_37	-1	known	silent	c.1080	p.G360	0.429	superfamily_AcylCo_DH/oxidase_C,pirsf_Acyl-CoA_oxidase	pfam_Acyl-CoA_oxidase_C,pfam_Acyl-CoA_Oxase/DH_cen-dom,superfamily_AcylCo_DH/oxidase_C,superfamily_AcylCoA_DH/oxidase_NM_dom,pirsf_Acyl-CoA_oxidase	0	no_errors	0	0	0	76	0	0	33	4	10.81	223	0	0.00	157	37	19.07
PIK3C3	0	genome.wustl.edu	37	18	39575930	39575930	+	Missense_Mutation	SNP	C	C	A			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	18	39575930	39575930	C	A	SNP	PIK3C3	ENST00000262039	human	ensembl	74_37	1	known	missense	c.863	p.P288H	1	pfam_PInositide-3_kin_accessory_dom,superfamily_ARM-type_fold,smart_PInositide-3_kin_accessory_dom,pirsf_PI3K_Vps34	pfam_PInositide-3_kin_accessory_dom,pfam_PI3/4_kinase_cat_dom,pfam_PI3K_C2_dom,superfamily_Kinase-like_dom,superfamily_ARM-type_fold,superfamily_C2_dom,smart_PI3K_C2_dom,smart_PInositide-3_kin_accessory_dom,smart_PI3/4_kinase_cat_dom,pirsf_PI3K_Vps34,pfscan_PI3/4_kinase_cat_dom	0	no_errors	0	0	0	237	0	0	105	42	28.57	247	2	0.80	101	40	28.37
TTI1	0	genome.wustl.edu	37	20	36642126	36642126	+	Silent	SNP	C	C	T			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	20	36642126	36642126	C	T	SNP	TTI1	ENST00000373447	human	ensembl	74_37	-1	known	silent	c.93	p.E31	0.015	superfamily_ARM-type_fold,pirsf_UCP005250	superfamily_ARM-type_fold,pirsf_UCP005250	0	no_errors	0	0	0	54	0	0	23	4	14.81	160	1	0.62	104	38	26.76
SSTR3	0	genome.wustl.edu	37	22	37602854	37602854	+	Missense_Mutation	SNP	C	C	T			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	22	37602854	37602854	C	T	SNP	SSTR3	ENST00000328544	human	ensembl	74_37	-1	known	missense	c.989	p.R330Q	1	prints_Somatstn_rcpt_3	pfam_GPCR_Rhodpsn,pfam_7TM_GPCR_olfarory/Srsx,pfam_7TM_GPCR_serpentine_rcpt_Srx,pfam_7TM_GPCR_serpentine_rcpt_Srv,pfscan_GPCR_Rhodpsn_7TM,prints_Somatstn_rcpt_3,prints_GPCR_Rhodpsn,prints_Somatstn_rcpt,prints_Somatstn_rcpt_5,prints_Neuropept_B/W_rcpt	0	no_errors	0	0	0	99	1	0.99	67	21	23.86	46	0	0.00	24	10	29.41
PLCXD2	0	genome.wustl.edu	37	3	111394132	111394148	+	Frame_Shift_Del	DEL	GGGACCATCTGCTCCCC	GGGACCATCTGCTCCCC	-			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	GGGACCATCTGCTCCCC	GGGACCATCTGCTCCCC	GGGACCATCTGCTCCCC	-	GGGACCATCTGCTCCCC	GGGACCATCTGCTCCCC	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	3	111394132	111394148	GGGACCATCTGCTCCCC	0	DEL	PLCXD2	ENST00000477665	human	ensembl	74_37	1	known	frame_shift_del	c.40_56	p.G14fs	1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000:1.000	NULL	pfam_PLipase_C_PInositol-sp_X_dom,superfamily_PLC-like_Pdiesterase_TIM-brl,smart_PLipase_C_PInositol-sp_X_dom,pfscan_PLipase_C_PInositol-sp_X_dom	0	no_errors	0	0	0	48	0	0	26	3	10.34	163	0	0.00	112	9	7.44
RB1CC1	0	genome.wustl.edu	37	8	53569316	53569328	+	Frame_Shift_Del	DEL	TTATTTGTTGGTT	TTATTTGTTGGTT	-			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	TTATTTGTTGGTT	TTATTTGTTGGTT	TTATTTGTTGGTT	-	TTATTTGTTGGTT	TTATTTGTTGGTT	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	8	53569316	53569328	TTATTTGTTGGTT	0	DEL	RB1CC1	ENST00000025008	human	ensembl	74_37	-1	known	frame_shift_del	c.3073_3061	p.N1021fs	0.619:0.615:0.253:0.273:0.212:0.281:0.278:0.063:0.248:0.309:0.344:0.977:1.000	NULL	pfam_Autophagy-rel_p11	0	no_errors	0	0	0	70	0	0	33	4	10.81	322	0	0.00	231	12	4.94
MT-RNR2	0	genome.wustl.edu	37	MT	2258	2258	+	RNA	SNP	A	A	C			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	A	A					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	MT	2258	2258	A	C	SNP	MT-RNR2	ENST00000387347	human	ensembl	74_37	1	known	rna	NULL	NULL	NULL	0	0	0	no_errors	0	0	0	24	0	0	174	21	10.71	0	0	0.00	7	0	0.00
FOXD4L3	0	genome.wustl.edu	37	9	70918627	70918627	+	Missense_Mutation	SNP	G	G	C			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	9	70918627	70918627	G	C	SNP	FOXD4L3	ENST00000342833	human	ensembl	74_37	1	known	missense	c.760	p.A254P	0.001	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	0	no_errors	rs201219160	G->C	0	64	0	0	67	13	16.25	0	0	0.00	0	0	0.00
FOXD4L3	0	genome.wustl.edu	37	9	70918632	70918632	+	Silent	SNP	C	C	G			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	9	70918632	70918632	C	G	SNP	FOXD4L3	ENST00000342833	human	ensembl	74_37	1	known	silent	c.765	p.P255	0.004	NULL	pfam_TF_fork_head,smart_TF_fork_head,pfscan_TF_fork_head,prints_TF_fork_head	0	no_errors	rs201851681	C->G	0	59	0	0	63	12	16	0	0	0.00	0	0	0.00
FGD5-AS1	0	genome.wustl.edu	37	3	14987109	14987110	+	RNA	INS	-	-	T			TCGA-ZB-A961-01A-11D-A428-09	TCGA-ZB-A961-10A-01D-A42B-09	-	-					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	80295400-7173-4245-a86f-ba2596ed60a7	045a7819-c3d5-4330-b70e-31240a4af916	3	14987109	14987110	0	T	INS	FGD5-AS1	ENST00000417835	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.499:0.511	0	0	0	no_errors	0	0	0	8	0	0	4	2	33.33	0	0	0.00	0	0	0.00
