Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_Position	End_Position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	chromosome_name	start	stop	reference	variant	type	gene_name	transcript_name	transcript_species	transcript_source	transcript_version	strand	transcript_status	trv_type	c_position	amino_acid_change	ucsc_cons	domain	all_domains	deletion_substructures	transcript_error	rsID	rsID_ref_var_alleles	CAF	normal_ref_reads	normal_var_reads	normal_vaf	tumor_ref_reads	tumor_var_reads	tumor_vaf	normal_ref_reads_val	normal_var_reads_val	normal_vaf_val	tumor_ref_reads_val	tumor_var_reads_val	tumor_vaf_val
NR0B1	0	genome.wustl.edu	37	X	30326468	30326468	+	Missense_Mutation	SNP	G	G	A			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	X	30326468	30326468	G	A	SNP	NR0B1	ENST00000378970	human	ensembl	74_37	-1	known	missense	c.1013	p.T338M	0	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core	pfam_Nucl_hrmn_rcpt_lig-bd_core,superfamily_Nucl_hormone_rcpt_ligand-bd,smart_Nucl_hrmn_rcpt_lig-bd_core,prints_Str_hrmn_rcpt	0	no_errors	0	0	0	74	0	0	27	19	41.3	75	0	0.00	37	18	32.14
AMER1	0	genome.wustl.edu	37	X	63411803	63411803	+	Missense_Mutation	SNP	G	G	T			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	X	63411803	63411803	G	T	SNP	AMER1	ENST00000330258	human	ensembl	74_37	-1	known	missense	c.1364	p.T455N	1	pfam_Uncharacterised_FAM123	pfam_Uncharacterised_FAM123	0	no_errors	0	0	0	25	0	0	9	7	43.75	211	0	0.00	153	84	35.44
LRRC7	0	genome.wustl.edu	37	1	70488846	70488846	+	Missense_Mutation	SNP	G	G	A			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	1	70488846	70488846	G	A	SNP	LRRC7	ENST00000035383	human	ensembl	74_37	1	known	missense	c.1469	p.R490H	1	NULL	pfam_Leu-rich_rpt,pfam_PDZ,superfamily_PDZ,smart_Leu-rich_rpt_typical-subtyp,smart_PDZ,pfscan_PDZ	0	no_errors	0	0	0	20	0	0	19	14	42.42	128	2	1.54	71	39	35.45
ADAM30	0	genome.wustl.edu	37	1	120437039	120437039	+	Missense_Mutation	SNP	G	G	A			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	1	120437039	120437039	G	A	SNP	ADAM30	ENST00000369400	human	ensembl	74_37	-1	known	missense	c.1921	p.R641W	0.119	pfscan_EG-like_dom	pfam_Peptidase_M12B,pfam_Peptidase_M12B_N,pfam_ADAM_Cys-rich,pfam_Blood-coag_inhib_Disintegrin,superfamily_Blood-coag_inhib_Disintegrin,smart_Blood-coag_inhib_Disintegrin,smart_ADAM_Cys-rich,pfscan_Blood-coag_inhib_Disintegrin,pfscan_EG-like_dom,pfscan_Peptidase_M12B,prints_Blood-coag_inhib_Disintegrin	0	no_errors	0	0	0	49	0	0	16	12	42.86	266	0	0.00	165	129	43.88
LOC440910	0	genome.wustl.edu	37	2	132046497	132046497	+	RNA	SNP	G	G	A			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	2	132046497	132046497	G	A	SNP	LOC440910	ENST00000560285	human	ensembl	74_37	1	known	rna	NULL	NULL	0.012	0	0	0	no_errors	0	0	0	30	0	0	11	7	38.89	15	0	0.00	7	4	36.36
BRPF1	0	genome.wustl.edu	37	3	9786002	9786002	+	Silent	SNP	G	G	T			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	3	9786002	9786002	G	T	SNP	BRPF1	ENST00000383829	human	ensembl	74_37	1	known	silent	c.2730	p.P910	1	NULL	pfam_Enhancer_polycomb-like_N,pfam_Bromodomain,pfam_PWWP_dom,superfamily_Bromodomain,superfamily_Znf_FYVE_PHD,smart_Znf_PHD,smart_Bromodomain,smart_PWWP_dom,pfscan_PWWP_dom,pfscan_Znf_PHD-finger,pfscan_Znf_C2H2,pfscan_Bromodomain,prints_Bromodomain	0	no_errors	0	0	0	142	0	0	52	41	44.09	107	0	0.00	65	56	46.28
CTNNB1	0	genome.wustl.edu	37	3	41280717	41280717	+	Missense_Mutation	SNP	C	C	T			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	3	41280717	41280717	C	T	SNP	CTNNB1	ENST00000349496	human	ensembl	74_37	1	known	missense	c.2230	p.P744S	1	NULL	pfam_Armadillo,superfamily_ARM-type_fold,smart_Armadillo,pfscan_Armadillo,prints_Beta-catenin	0	no_errors	0	0	0	50	0	0	8	13	61.9	116	0	0.00	58	51	46.79
PHOX2B	0	genome.wustl.edu	37	4	41747864	41747864	+	Missense_Mutation	SNP	T	T	C			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	T	T	T	C	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	4	41747864	41747864	T	C	SNP	PHOX2B	ENST00000226382	human	ensembl	74_37	-1	known	missense	c.905	p.N302S	1	NULL	pfam_Homeobox_dom,superfamily_Homeodomain-like,smart_Homeobox_dom,pfscan_Homeobox_dom,prints_Antifreeze_1	0	no_errors	0	0	0	24	0	0	14	10	41.67	137	0	0.00	72	44	37.93
METTL14	0	genome.wustl.edu	37	4	119626850	119626850	+	Missense_Mutation	SNP	A	A	G			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	4	119626850	119626850	A	G	SNP	METTL14	ENST00000388822	human	ensembl	74_37	1	known	missense	c.940	p.I314V	1	pfam_MT-A70-like,pfscan_MT-A70-like	pfam_MT-A70-like,pfscan_MT-A70-like	0	no_errors	0	0	0	95	0	0	52	10	16.13	269	1	0.37	229	40	14.87
SYNE1	0	genome.wustl.edu	37	6	152734623	152734623	+	Missense_Mutation	SNP	C	C	G			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	6	152734623	152734623	C	G	SNP	SYNE1	ENST00000265368	human	ensembl	74_37	-1	known	missense	c.6094	p.E2032Q	1	superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom	pfam_Spectrin_repeat,pfam_CH-domain,pfam_KASH,superfamily_CH-domain,superfamily_Calpain_domain_III,superfamily_ABC1_TM_dom,smart_CH-domain,smart_Spectrin/alpha-actinin,pfscan_CH-domain,pfscan_KASH	0	no_errors	0	0	0	134	0	0	63	27	30	285	0	0.00	150	93	38.11
GTF2I	0	genome.wustl.edu	37	7	74146970	74146970	+	Missense_Mutation	SNP	T	T	A			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	T	T	T	A	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	7	74146970	74146970	T	A	SNP	GTF2I	ENST00000324896	human	ensembl	74_37	1	known	missense	c.1271	p.L424H	1	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	pfam_GTF2I,superfamily_GTF2I,pirsf_TF_II-I,pfscan_GTF2I	0	no_errors	0	0	0	512	0	0	170	135	44.26	120	0	0.00	66	67	50.38
RP1L1	0	genome.wustl.edu	37	8	10466172	10466172	+	Missense_Mutation	SNP	G	G	T			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	8	10466172	10466172	G	T	SNP	RP1L1	ENST00000382483	human	ensembl	74_37	-1	known	missense	c.5436	p.D1812E	0	NULL	pfam_Doublecortin_dom,smart_Doublecortin_dom,pfscan_Doublecortin_dom	0	no_errors	0	0	0	35	1	2.78	26	3	10.34	201	0	0.00	204	17	7.66
PLIN2	0	genome.wustl.edu	37	9	19120930	19120930	+	Silent	SNP	G	G	T			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	9	19120930	19120930	G	T	SNP	PLIN2	ENST00000276914	human	ensembl	74_37	-1	known	silent	c.543	p.T181	0.998	pfam_Perilipin,pirsf_Perilipin	pfam_Perilipin,pirsf_Perilipin	0	no_errors	0	0	0	31	0	0	14	8	36.36	162	0	0.00	116	73	38.22
HRAS	0	genome.wustl.edu	37	11	534285	534285	+	Missense_Mutation	SNP	C	C	A			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	C	C	C	A	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	11	534285	534285	C	A	SNP	HRAS	ENST00000311189	human	ensembl	74_37	-1	known	missense	c.38	p.G13V	1	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	pfam_Small_GTPase,pfam_MIRO-like,pfam_Small_GTPase_ARF/SAR,pfam_EF_GTP-bd_dom,pfam_Fe2_transport_prot_B_N,superfamily_P-loop_NTPase,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,prints_Small_GTPase,tigrfam_Small_GTP-bd_dom	0	no_errors	rs104894226	C->A,G,T	0	45	0	0	9	16	64	88	0	0.00	51	44	46.32
DYNC2H1	0	genome.wustl.edu	37	11	103019260	103019260	+	Nonsense_Mutation	SNP	G	G	T			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	11	103019260	103019260	G	T	SNP	DYNC2H1	ENST00000398093	human	ensembl	74_37	1	known	nonsense	c.2860	p.E954*	1	NULL	pfam_Dynein_heavy_dom,pfam_Dynein_heavy_dom-2,pfam_Dynein_heavy_dom-1,pfam_ATPase_dyneun-rel_AAA,superfamily_P-loop_NTPase,smart_AAA+_ATPase	0	no_errors	0	0	0	105	0	0	33	17	34	257	0	0.00	156	95	37.70
CD3E	0	genome.wustl.edu	37	11	118184528	118184528	+	Missense_Mutation	SNP	G	G	T			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	G	G	G	T	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	11	118184528	118184528	G	T	SNP	CD3E	ENST00000361763	human	ensembl	74_37	1	known	missense	c.459	p.K153N	0.987	NULL	pfam_Phos_immunorcpt_sig_ITAM,smart_Ig_sub2,smart_Phos_immunorcpt_sig_ITAM,pfscan_Phos_immunorcpt_sig_ITAM	0	no_errors	0	0	0	28	0	0	10	15	60	84	0	0.00	72	53	42.40
NFATC4	0	genome.wustl.edu	37	14	24839464	24839464	+	Missense_Mutation	SNP	G	G	A			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	14	24839464	24839464	G	A	SNP	NFATC4	ENST00000413692	human	ensembl	74_37	1	known	missense	c.1049	p.R350H	0.934	NULL	pfam_RHD,pfam_IPT,superfamily_p53-like_TF_DNA-bd,superfamily_Ig_E-set,smart_IPT,pfscan_RHD,prints_NFAT	0	no_errors	0	0	0	64	0	0	39	20	33.9	80	0	0.00	33	30	47.62
SOS2	0	genome.wustl.edu	37	14	50697942	50697942	+	Silent	SNP	C	C	G			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	C	C	C	G	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	14	50697942	50697942	C	G	SNP	SOS2	ENST00000216373	human	ensembl	74_37	-1	known	silent	c.60	p.R20	1	superfamily_Histone-fold	pfam_RasGRF_CDC25,pfam_Ras-like_Gua-exchang_fac_N,pfam_DH-domain,pfam_Pleckstrin_homology,pfam_Histone_core_D,superfamily_Ras_GEF_dom,superfamily_Histone-fold,superfamily_DH-domain,smart_DH-domain,smart_Pleckstrin_homology,smart_Ras-like_Gua-exchang_fac_N,smart_RasGRF_CDC25,pfscan_Pleckstrin_homology,pfscan_DH-domain,pfscan_RasGRF_CDC25,pfscan_Ras-like_Gua-exchang_fac_N	0	no_errors	0	0	0	10	0	0	5	10	66.67	81	0	0.00	58	28	32.56
ADAM21P1	0	genome.wustl.edu	37	14	70712650	70712650	+	RNA	SNP	A	A	C			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	A	A	A	C	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	14	70712650	70712650	A	C	SNP	ADAM21P1	ENST00000530196	human	ensembl	74_37	-1	known	rna	NULL	NULL	0.004	0	0	0	no_errors	0	0	0	115	0	0	49	26	34.67	100	0	0.00	85	43	33.59
ARHGAP23	0	genome.wustl.edu	37	17	36622966	36622966	+	Nonsense_Mutation	SNP	C	C	T			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	17	36622966	36622966	C	T	SNP	ARHGAP23	ENST00000431231	human	ensembl	74_37	1	known	nonsense	c.1042	p.R348*	1	NULL	pfam_RhoGAP_dom,pfam_PDZ,pfam_Pleckstrin_homology,superfamily_Rho_GTPase_activation_prot,superfamily_PDZ,smart_PDZ,smart_Pleckstrin_homology,smart_RhoGAP_dom,pfscan_PDZ,pfscan_Pleckstrin_homology,pfscan_RhoGAP_dom	0	no_errors	0	0	0	27	0	0	14	9	39.13	32	0	0.00	43	5	10.42
SCN4A	0	genome.wustl.edu	37	17	62043590	62043590	+	Missense_Mutation	SNP	C	C	T			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	17	62043590	62043590	C	T	SNP	SCN4A	ENST00000435607	human	ensembl	74_37	-1	known	missense	c.1114	p.G372S	1	pfam_Ion_trans_dom	pfam_Ion_trans_dom,pfam_Na_trans_assoc,pfam_PKD1_2_channel,pfscan_IQ_motif_EF-hand-BS,prints_Na_channel_a4su,prints_Na_channel_asu,prints_PKD_2	0	no_errors	0	0	0	96	0	0	34	18	34.62	173	0	0.00	103	43	29.45
MUC16	0	genome.wustl.edu	37	19	9063747	9063747	+	Nonsense_Mutation	SNP	G	G	C			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	G	G	G	C	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	19	9063747	9063747	G	C	SNP	MUC16	ENST00000397910	human	ensembl	74_37	-1	known	nonsense	c.23699	p.S7900*	0	NULL	pfam_SEA_dom,smart_SEA_dom,pfscan_SEA_dom	0	no_errors	0	0	0	51	0	0	17	15	46.88	255	0	0.00	137	125	47.71
SEPW1	0	genome.wustl.edu	37	19	48282004	48282004	+	RNA	SNP	C	C	T			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	19	48282004	48282004	C	T	SNP	SEPW1	ENST00000599302	human	ensembl	74_37	1	known	rna	NULL	NULL	0	0	0	0	no_errors	rs368032623	C->T	0.9998,0.0001997	29	0	0	9	14	60.87	47	0	0.00	21	13	38.24
PAX1	0	genome.wustl.edu	37	20	21690063	21690063	+	Silent	SNP	C	C	T			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	C	C	C	T	C	C	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	20	21690063	21690063	C	T	SNP	PAX1	ENST00000398485	human	ensembl	74_37	1	known	silent	c.1263	p.F421	1	NULL	pfam_Paired_dom,superfamily_Homeodomain-like,smart_Paired_dom,pfscan_Paired_dom,prints_Paired_dom	0	no_errors	0	0	0	11	0	0	5	3	37.5	54	0	0.00	37	34	47.89
CDH22	0	genome.wustl.edu	37	20	44869801	44869801	+	Silent	SNP	G	G	A			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	G	G	G	A	G	G	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	20	44869801	44869801	G	A	SNP	CDH22	ENST00000372262	human	ensembl	74_37	-1	known	silent	c.351	p.G117	0.024	pfam_Cadherin,superfamily_Cadherin-like,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	pfam_Cadherin,pfam_Cadherin_cytoplasmic-dom,superfamily_Cadherin-like,superfamily_MFS_dom_general_subst_transpt,smart_Cadherin,pfscan_Cadherin,prints_Cadherin	0	no_errors	0	0	0	39	0	0	8	16	66.67	93	0	0.00	37	31	45.59
LZTR1	0	genome.wustl.edu	37	22	21337374	21337374	+	Missense_Mutation	SNP	A	A	G			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	A	A	A	G	A	A	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	22	21337374	21337374	A	G	SNP	LZTR1	ENST00000215739	human	ensembl	74_37	1	known	missense	c.259	p.N87D	1	pfam_Kelch_1,smart_Kelch_1	pfam_Kelch_1,pfam_BTB_POZ,pfam_Kelch_2,superfamily_BTB/POZ_fold,smart_Kelch_1,smart_BTB/POZ-like,pfscan_BTB/POZ-like	0	no_errors	0	0	0	71	0	0	29	19	39.58	195	0	0.00	119	60	33.33
TCF20	0	genome.wustl.edu	37	22	42608141	42608141	+	Missense_Mutation	SNP	T	T	G			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	T	T	T	G	T	T	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	22	42608141	42608141	T	G	SNP	TCF20	ENST00000359486	human	ensembl	74_37	-1	known	missense	c.3171	p.E1057D	0.995	NULL	smart_Znf_PHD	0	no_errors	0	0	0	53	0	0	30	20	40	239	0	0.00	164	115	41.07
GET4	0	genome.wustl.edu	37	7	935032	935034	+	In_Frame_Del	DEL	CGA	CGA	-			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	CGA	CGA	CGA	-	CGA	CGA	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	7	935032	935034	CGA	0	DEL	GET4	ENST00000265857	human	ensembl	74_37	1	known	in_frame_del	c.957_959	p.D320in_frame_del	1.000:1.000:1.000	NULL	pfam_UPF0363	0	no_errors	0	0	0	55	0	0	33	6	15.38	53	0	0.00	29	19	39.58
RHOBTB1	0	genome.wustl.edu	37	10	62648684	62648690	+	Frame_Shift_Del	DEL	ACTCTGG	ACTCTGG	-			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	ACTCTGG	ACTCTGG	ACTCTGG	-	ACTCTGG	ACTCTGG	Unknown	Valid	Somatic	Phase_IV	WXS	Hybrid_Capture_Illumina_Seq			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	10	62648684	62648690	ACTCTGG	0	DEL	RHOBTB1	ENST00000337910	human	ensembl	74_37	-1	known	frame_shift_del	c.742_736	p.P246fs	1.000:0.927:0.995:0.995:0.936:1.000:1.000	superfamily_BTB/POZ_fold	pfam_BTB_POZ,pfam_Small_GTPase,pfam_MIRO-like,superfamily_P-loop_NTPase,superfamily_BTB/POZ_fold,smart_Small_GTPase_Ras,smart_Small_GTPase_Rab_type,smart_Small_GTPase_Rho,smart_BTB/POZ-like,pfscan_BTB/POZ-like,prints_Small_GTPase	0	no_errors	0	0	0	74	0	0	38	12	24	234	0	0.00	154	21	12.00
GOLGA8T	0	genome.wustl.edu	37	15	30433056	30433056	+	Silent	SNP	C	C	T			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	C	C					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	15	30433056	30433056	C	T	SNP	GOLGA8T	ENST00000569052	human	ensembl	74_37	1	novel	silent	c.603	p.R201	0	NULL	NULL	0	no_errors	0	0	0	141	0	0	50	36	41.86	0	0	0.00	0	0	0.00
DNM1P47	0	genome.wustl.edu	37	15	102294648	102294648	+	RNA	SNP	T	T	C			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	15	102294648	102294648	T	C	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	1	known	rna	NULL	NULL	0.999	0	0	0	no_errors	0	0	0	56	0	0	57	9	13.64	12	0	0.00	8	0	0.00
DNM1P47	0	genome.wustl.edu	37	15	102294651	102294651	+	RNA	SNP	T	T	G			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	T	T					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	15	102294651	102294651	T	G	SNP	DNM1P47	ENST00000561463	human	ensembl	74_37	1	known	rna	NULL	NULL	0.999	0	0	0	no_errors	0	0	0	54	0	0	57	9	13.64	12	0	0.00	8	0	0.00
ZNF91	0	genome.wustl.edu	37	19	23544831	23544831	+	Missense_Mutation	SNP	G	G	T			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	G	G					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	19	23544831	23544831	G	T	SNP	ZNF91	ENST00000300619	human	ensembl	74_37	-1	known	missense	c.950	p.T317N	0.952	pfscan_Znf_C2H2	pfam_Znf_C2H2,pfam_Krueppel-associated_box,superfamily_Krueppel-associated_box,smart_Krueppel-associated_box,smart_Znf_C2H2-like,pfscan_Znf_C2H2,pfscan_Krueppel-associated_box	0	no_errors	0	0	0	88	0	0	47	4	7.84	4	0	0.00	4	0	0.00
DSPP	0	genome.wustl.edu	37	4	88537109	88537117	+	In_Frame_Del	DEL	AGCAGCGAC	AGCAGCGAC	-			TCGA-ZB-A965-01A-11D-A428-09	TCGA-ZB-A965-10A-01D-A42B-09	AGCAGCGAC	AGCAGCGAC					Unknown	Untested	Somatic	Phase_IV	WXS	none			Illumina HiSeq	a2bbec71-ac68-4c79-ae2f-53e3ed39bffb	9a8ab89f-dab5-469c-8a2f-b039eaa0aa10	4	88537109	88537117	AGCAGCGAC	0	DEL	DSPP	ENST00000282478	human	ensembl	74_37	1	known	in_frame_del	c.3295_3303	p.SSD1102in_frame_del	0.865:0.905:0.920:0.917:0.890:0.802:0.835:0.850:0.862	NULL	NULL	0	no_errors	0	0	0	12	0	0	9	4	30.77	1	0	0.00	1	0	0.00
