Hugo_Symbol	Entrez_Gene_Id	Center	NCBI_Build	Chromosome	Start_position	End_position	Strand	Variant_Classification	Variant_Type	Reference_Allele	Tumor_Seq_Allele1	Tumor_Seq_Allele2	dbSNP_RS	dbSNP_Val_Status	Tumor_Sample_Barcode	Matched_Norm_Sample_Barcode	Match_Norm_Seq_Allele1	Match_Norm_Seq_Allele2	Tumor_Validation_Allele1	Tumor_Validation_Allele2	Match_Norm_Validation_Allele1	Match_Norm_Validation_Allele2	Verification_Status	Validation_Status	Mutation_Status	Sequencing_Phase	Sequence_Source	Validation_Method	Score	BAM_File	Sequencer	Tumor_Sample_UUID	Matched_Norm_Sample_UUID	COSMIC_Codon	COSMIC_Gene	Transcript_Id	Exon	ChromChange	AAChange	Genome_Plus_Minus_10_Bp	Drug_Target	TTotCov	TVarCov	NTotCov	NVarCov	dbSNPPopFreq	Trna_tot	Trna_ref	Trna_var	Trna_alt1	Trna_alt2
PLCH2	9651	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	2418423	2418423	+	Silent	SNP	G	G	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	PLCH2-229	NM_014638	exon6	c.G894A	p.G298G	TAAGGGGCTGCTG	.	45	10	52	0	.	0	0	0	0	0
PER3	8863	broad.mit.edu	37	1	7854051	7854051	+	Silent	SNP	T	T	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	PER3-93	NM_016831	exon5	c.T624C	p.P208P	GAAACCTTTTTTC	.	80	4	95	0	.	0	0	0	0	0
CASZ1	54897	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	10713663	10713663	+	Silent	SNP	G	G	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	CASZ1-113	NM_001079843	exon11	c.C2451T	p.T817T	GCTGGGGGTGCCC	.	103	40	84	1	.	4	1	3	0	0
CASZ1	54897	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	10714628	10714628	+	Silent	SNP	G	G	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	CASZ1-113	NM_001079843	exon10	c.C1686T	p.Y562Y	GCTCGTGTACACC	.	165	52	158	0	.	2	2	0	0	0
KDM1A	23028	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	23380289	23380289	+	Silent	SNP	G	G	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	KDM1A-206	NM_001009999	exon5	c.G747A	p.L249L	TCAGCTGACATTT	.	133	47	314	1	.	6	3	3	0	0
TESK2	10420	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	45812448	45812448	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	TESK2-624	NM_007170	exon9	c.T796A	p.F266I	GCCCGAAATTCTG	.	116	47	107	0	.	0	0	0	0	0
IPP	3652	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	46206860	46206860	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	IPP-91	NM_001145349	exon3	c.C437T	p.S146F	TGCTCAGAGAACT	.	126	39	172	1	.	2	1	1	0	0
MCOLN3	55283	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	85506767	85506767	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	MCOLN3-91	NM_018298	exon3	c.G322C	p.D108H	TTCGGTCCATATA	.	125	44	213	0	.	0	0	0	0	0
TRIM45	80263	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	117660955	117660955	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	TRIM45-226	NM_001145635	exon2	c.A923C	p.N308T	AGGGAATTTTCCT	.	99	33	101	0	.	1	1	0	0	0
ABL2	27	broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	179076969	179076969	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ABL2-1081	NM_007314	exon12	c.C3433A	p.L1145I	GGCTGAGTTCCAG	.	126	39	118	1	.	6	2	4	0	0
ZNF281	23528	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	200378264	200378264	+	Silent	SNP	C	C	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ZNF281-154	NM_012482	exon2	c.G570A	p.Q190Q	GTGGTGCTGGGCT	.	87	35	78	0	.	0	0	0	0	0
LBR	3930	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	1	225600280	225600280	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	LBR-228	NM_194442	exon8	c.T960G	p.H320Q	CACGTAATGAAAC	.	407	97	540	1	.	2	1	1	0	0
PROSER2	254427	broad.mit.edu;bcgsc.ca	37	10	11911626	11911626	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	.	NM_153256	exon4	c.G529C	p.A177P	CTGCGCGCCCCCT	.	145	56	149	15	.	8	4	4	0	0
GPAM	57678	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	10	113913352	113913352	+	Nonsense_Mutation	SNP	G	G	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	GPAM-92	NM_001244949	exon22	c.C2443T	p.R815X	TTTGTCGGTTGCA	.	91	30	106	0	.	0	0	0	0	0
TRIM66	9866	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	8639493	8639493	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	TRIM66-68	NM_014818	exon20	c.T3649C	p.X1217R	GCTCTCACACCTG	.	57	14	95	0	.	0	0	0	0	0
IGSF22	283284	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	11	18731076	18731076	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	IGSF22-140	NM_173588	exon18	c.G2856T	p.K952N	GGGGATCTTTGTG	.	102	34	97	0	.	0	0	0	0	0
GRIN2B	2904	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	13768093	13768093	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	GRIN2B-231	NM_000834	exon7	c.A1609G	p.M537V	ACACCATGACACT	.	82	21	93	0	.	0	0	0	0	0
AMHR2	269	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	53825014	53825014	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	AMHR2-628	NM_020547	exon11	c.A1479T	p.E493D	CCCAGAAGCACGG	.	68	22	59	0	.	0	0	0	0	0
TARBP2	6895	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	53899840	53899840	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	TARBP2-226	NM_134323	exon9	c.T1009C	p.C337R	ACTGTGTGTCATG	.	71	20	78	0	.	43	19	24	0	0
METTL21B	25895	broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	58166555	58166555	+	Silent	SNP	C	C	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	METTL21B-514	NM_015433	exon1	c.C48T	p.F16F	GGTGTTCCCGCGG	.	106	41	128	3	.	5	3	2	0	0
ATP2B1	490	broad.mit.edu	37	12	90029004	90029004	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ATP2B1-516	NM_001001323	exon3	c.A431G	p.E144G	TCTTCCTCCCCAA	.	33	3	63	0	.	0	0	0	0	0
SBNO1	55206	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	12	123815855	123815855	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	SBNO1-292	NM_001167856	exon7	c.G977C	p.G326A	CCTTTTCCTACAC	.	94	33	92	0	.	1	1	0	0	0
ZMYM5	9205	bcgsc.ca	37	13	20413049	20413049	+	Silent	SNP	G	G	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ZMYM5-90	NM_001039650	exon5	c.C663A	p.A221A	AAGTAAGGCCACT	.	169	68	220	5	.	1	0	1	0	0
NBEA	26960	broad.mit.edu;ucsc.edu;bcgsc.ca	37	13	35731352	35731352	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	NBEA-144	NM_015678	exon21	c.A2789G	p.Y930C	TAAAATATGAATG	.	65	16	94	1	.	0	0	0	0	0
SERPINE3	647174	broad.mit.edu	37	13	51922450	51922450	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	SERPINE3-24	NM_001101320	exon4	c.A802C	p.T268P	AAAGACACCCCCC	.	89	20	74	13	.	0	0	0	0	0
TPP2	7174	broad.mit.edu;ucsc.edu;bcgsc.ca	37	13	103271166	103271166	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	TPP2-92	NM_003291	exon5	c.G590T	p.C197F	ATGACTGCTTGGT	.	74	30	117	2	.	0	0	0	0	0
TTC5	91875	broad.mit.edu;ucsc.edu	37	14	20774052	20774052	+	Silent	SNP	T	T	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	TTC5-91	NM_138376	exon1	c.A45G	p.K15K	CTGCAATTTCTGC	.	73	10	74	1	.	0	0	0	0	0
SNX6	58533	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	14	35062293	35062293	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	SNX6-226	NM_152233	exon8	c.G712T	p.D238Y	ATGCATCCTTAAC	.	127	31	269	0	.	9	4	5	0	0
LTBP2	4053	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	14	75019017	75019017	+	Silent	SNP	C	C	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	LTBP2-92	NM_000428	exon6	c.G1272C	p.G424G	GAACTTCCCGGTG	.	83	26	67	0	.	0	0	0	0	0
IRF2BPL	64207	broad.mit.edu;ucsc.edu;bcgsc.ca	37	14	77492877	77492877	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	IRF2BPL-90	NM_024496	exon1	c.T1259C	p.F420S	TCAATGAACAGCT	.	100	31	93	1	.	13	9	3	1	0
TJP1	7082	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	30019082	30019082	+	Silent	SNP	T	T	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	TJP1-95	NM_175610	exon17	c.A2214C	p.T738T	TCTCATTGTTTTT	.	110	26	131	0	.	0	0	0	0	0
TP53BP1	7158	ucsc.edu;bcgsc.ca	37	15	43748739	43748739	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	TP53BP1-294	NM_001141980	exon12	c.G2067A	p.M689I	ACTCTCCATATTT	.	93	30	130	2	.	0	0	0	0	0
HMG20A	10363	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	15	77750833	77750833	+	Silent	SNP	C	C	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	HMG20A-228	NM_018200	exon3	c.C84G	p.T28T	GGCTACCACTGGG	.	45	15	64	0	.	0	0	0	0	0
IREB2	3658	broad.mit.edu	37	15	78758793	78758793	+	Silent	SNP	A	A	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	IREB2-90	NM_004136	exon5	c.A591T	p.T197T	GAATACACCCATC	.	91	4	143	0	.	0	0	0	0	0
APOBR	55911	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	28509637	28509637	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	APOBR-90	NM_018690	exon3	c.C3191G	p.P1064R	GGACCCCGGTGCC	.	93	10	55	0	.	43	43	0	0	0
SF3B3	23450	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	16	70605581	70605581	+	Silent	SNP	G	G	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	SF3B3-91	NM_012426	exon26	c.G3519A	p.V1173V	GAATGTGATTGAT	.	93	24	73	0	.	0	0	0	0	0
TRPV3	162514	broad.mit.edu	37	17	3438998	3438998	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	TRPV3-94	NM_001258205	exon7	c.C653A	p.A218E	TTCAGCGCCGTCT	.	26	4	77	1	.	0	0	0	0	0
GID4	79018	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	17962263	17962263	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	.	NM_024052	exon4	c.T688A	p.Y230N	GGAGACTACGTCT	.	125	33	111	0	.	10	6	4	0	0
CORO6	84940	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	27948314	27948314	+	Silent	SNP	G	G	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	CORO6-90	NM_032854	exon1	c.C126T	p.V42V	GGGGTTGACGGCA	.	119	48	83	1	.	0	0	0	0	0
KRTAP3-2	83897	bcgsc.ca	37	17	39155883	39155883	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	.	NM_031959	exon1	c.C223G	p.P75A	GGCCCGGAGTTGG	.	153	90	107	3	.	0	0	0	0	0
ACOX1	51	broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	73953542	73953542	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ACOX1-91	NM_007292	exon4	c.G536C	p.G179A	TTACGCCCACCAG	.	149	73	148	2	.	0	0	0	0	0
FASN	2194	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	17	80047603	80047603	+	Splice_Site	SNP	C	C	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	FASN-90	NM_004104	exon13	c.1871-1G>C	.	ACAAGCCTATGGC	.	92	15	84	0	.	0	0	0	0	0
ANKRD29	147463	bcgsc.ca	37	18	21214114	21214114	+	Splice_Site	SNP	C	C	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ANKRD29-156	NM_173505	exon6	c.331-1G>A	.	CCCGTCCTATGGA	.	56	18	53	1	.	0	0	0	0	0
MUC16	94025	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	9057871	9057871	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	MUC16-566	NM_024690	exon3	c.C29575T	p.P9859S	AGGCAGGATTTGA	.	123	36	140	0	.	0	0	0	0	0
CARM1	10498	broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	11019856	11019856	+	Silent	SNP	G	G	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	CARM1-90	NM_199141	exon4	c.G531A	p.L177L	CATCCTGCAAAAC	.	60	20	73	1	.	13	5	8	0	0
ZNF45	7596	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	44419046	44419046	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ZNF45-91	NM_003425	exon10	c.T542G	p.I181S	TGGTTAATTTGAA	.	74	25	86	0	.	1	0	1	0	0
ZNF534	147658	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	19	52941044	52941044	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ZNF534-68	NM_001143939	exon4	c.T370A	p.L124I	CATGGATTAACTC	.	257	82	455	0	.	0	0	0	0	0
FAM228A	653140	ucsc.edu;bcgsc.ca	37	2	24413283	24413283	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	.	NM_001040710	exon6	c.C404T	p.P135L	ACAGTCCTGAAAA	.	234	62	290	3	.	0	0	0	0	0
SOS1	6654	bcgsc.ca	37	2	39284009	39284009	+	Splice_Site	SNP	T	T	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	SOS1-851	NM_005633	exon5	c.346-2A>G	.	ACCTCCTGCAAAA	.	43	21	117	4	.	0	0	0	0	0
GMCL1	64395	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	70096993	70096993	+	Missense_Mutation	SNP	T	T	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	GMCL1-93	NM_178439	exon12	c.T1361G	p.F454C	TAGCATTTAGGTA	.	56	20	63	0	.	0	0	0	0	0
PCDP1	0	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	120362785	120362785	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	.	NM_001271049	exon11	c.A1053C	p.K351N	TTCAAAAACGAGA	.	280	80	419	0	.	4	2	2	0	0
MKI67IP	84365	bcgsc.ca	37	2	122494414	122494414	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	MKI67IP-90	NM_032390	exon1	c.T13C	p.S5P	GGCCAGAAAAAGT	.	156	53	146	3	.	9	4	5	0	0
SCN1A	6323	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	166908235	166908235	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	SCN1A-147	NM_001165964	exon6	c.G958T	p.D320Y	TTGAATCTTGAAT	.	105	38	199	1	.	0	0	0	0	0
IHH	3549	broad.mit.edu;ucsc.edu;bcgsc.ca	37	2	219920296	219920296	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	IHH-710	NM_002181	exon3	c.T869C	p.F290S	GCCCGGAAGCGGG	.	60	17	67	1	.	3	2	1	0	0
PER2	8864	broad.mit.edu	37	2	239186362	239186362	+	Silent	SNP	C	C	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	PER2-154	NM_022817	exon2	c.G216A	p.P72P	GGCATCCGGTGGC	.	27	4	30	0	.	0	0	0	0	0
CRNKL1	51340	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	20033152	20033152	+	Silent	SNP	G	G	A	rs140622884		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	CRNKL1-137	NM_016652	exon2	c.C318T	p.A106A	GACGGAGGCGGCA	.	131	38	86	0	G|1.000;A|0.000	0	0	0	0	0
FRG1B	284802	bcgsc.ca	37	20	29623215	29623215	+	RNA	SNP	G	G	A	rs77485836		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	FRG1B-22	.	.	.	.	GCACTCGACAATG	.	598	46	988	36	G|0.500;A|0.500	39	38	1	0	0
TM9SF4	9777	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	30730877	30730877	+	Silent	SNP	C	C	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	TM9SF4-514	NM_014742	exon6	c.C621T	p.F207F	CCGCTTCGAGGTG	.	69	17	97	0	.	8	8	0	0	0
CDH4	1002	broad.mit.edu;ucsc.edu;bcgsc.ca	37	20	60427908	60427908	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	CDH4-282	NM_001794	exon6	c.C831A	p.F277L	TGAGTTCATCAAC	.	100	34	82	1	.	0	0	0	0	0
PRODH	5625	broad.mit.edu;ucsc.edu;bcgsc.ca	37	22	18909899	18909899	+	Missense_Mutation	SNP	C	C	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	PRODH-289	NM_016335	exon8	c.G868T	p.G290C	CGATGCCCAACTT	.	148	52	125	2	.	8	0	8	0	0
PTPN23	25930	hgsc.bcm.edu;bcgsc.ca	37	3	47452317	47452317	+	Missense_Mutation	SNP	C	C	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	PTPN23-227	NM_015466	exon20	c.C3029G	p.P1010R	GGCAGCCGCCACC	.	130	35	108	0	.	7	3	4	0	0
RNF123	63891	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	49737921	49737921	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	RNF123-584	NM_022064	exon14	c.A1127G	p.D376G	TACAAGATTGCCT	.	105	40	104	1	.	4	1	3	0	0
IL17RD	54756	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	57136553	57136553	+	Silent	SNP	C	C	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	IL17RD-500	NM_017563	exon10	c.G933A	p.S311S	GAATGCCGATATG	.	138	37	145	0	.	0	0	0	0	0
HSPBAP1	79663	broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	122471457	122471457	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	HSPBAP1-227	NM_024610	exon6	c.T806C	p.I269T	GAGTTTATACTGA	.	169	46	293	1	.	6	5	1	0	0
DNAJC13	23317	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	3	132207851	132207851	+	Missense_Mutation	SNP	T	T	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	DNAJC13-272	NM_015268	exon31	c.T3454C	p.F1152L	CAGGCTTTCAAGT	.	44	13	106	0	.	0	0	0	0	0
WHSC1	7468	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	1977074	1977074	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	WHSC1-664	NM_133335	exon20	c.G3568C	p.V1190L	AAAACGGTCTGCC	.	111	24	99	0	.	3	1	2	0	0
WDR19	57728	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	39205336	39205336	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	WDR19-67	NM_025132	exon7	c.A597C	p.E199D	TGCTGAAAGCATG	.	66	21	133	0	.	0	0	0	0	0
EXOC1	55763	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	56737307	56737307	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	EXOC1-950	NM_018261	exon7	c.A872C	p.Q291P	CCCTTCAGGAAGG	.	53	18	98	0	.	0	0	0	0	0
DSPP	1834	bcgsc.ca	37	4	88536142	88536142	+	Silent	SNP	T	T	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	DSPP-90	NM_014208	exon5	c.T2328C	p.S776S	TGATAGTAGTGAC	.	312	27	342	7	.	0	0	0	0	0
PABPC4L	132430	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	135121148	135121148	+	Nonsense_Mutation	SNP	C	C	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	.	NM_001114734	exon2	c.G1201T	p.E401X	CATCCTCAGGAGA	.	105	29	146	0	.	0	0	0	0	0
SMARCA5	8467	broad.mit.edu	37	4	144445524	144445524	+	Nonsense_Mutation	SNP	C	C	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	SMARCA5-227	NM_003601	exon4	c.C424T	p.R142X	AGTTACCGACACC	.	294	4	506	1	.	0	0	0	0	0
DDX60L	91351	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	4	169315621	169315621	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	DDX60L-69	NM_001012967	exon28	c.A3805T	p.I1269F	CCCTAATAAGCCC	.	46	12	95	0	.	0	0	0	0	0
SSBP2	23635	ucsc.edu	37	5	80724477	80724477	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	SSBP2-223	NM_001256732	exon16	c.G1007A	p.S336N	TGATTACTCAGGC	.	31	4	56	0	.	12	12	0	0	0
DMXL1	1657	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	118479556	118479556	+	Silent	SNP	T	T	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	DMXL1-92	NM_005509	exon14	c.T2397C	p.F799F	AGTCTTTAACATC	.	303	97	601	1	.	0	0	0	0	0
MEGF10	84466	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	5	126705695	126705695	+	Splice_Site	SNP	G	G	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	MEGF10-94	NM_001256545	exon5	c.412+1G>T	.	CCAGTGGTAAGTT	.	42	13	33	0	.	0	0	0	0	0
HFE	3077	broad.mit.edu;bcgsc.ca	37	6	26091332	26091332	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	HFE-90	NM_139006	exon2	c.G340C	p.E114Q	AGCAAGGGTATGT	.	69	24	73	1	.	1	1	0	0	0
ORC3	23595	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	88362905	88362905	+	Missense_Mutation	SNP	A	A	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ORC3-206	NM_181837	exon14	c.A1454T	p.N485I	GTGAAAACCACCT	.	79	23	126	1	.	11	6	5	0	0
PLEKHG1	57480	broad.mit.edu;ucsc.edu;bcgsc.ca	37	6	151161158	151161158	+	Missense_Mutation	SNP	C	C	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	PLEKHG1-92	NM_001029884	exon17	c.C3284T	p.A1095V	AGTTAGCAGATTT	.	152	49	117	1	.	0	0	0	0	0
HEATR2	54919	broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	769345	769345	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	HEATR2-69	NM_017802	exon2	c.A641C	p.Q214P	TGATGCAGACCAT	.	98	23	70	1	.	4	4	0	0	0
SDK1	221935	broad.mit.edu;bcgsc.ca	37	7	4056809	4056809	+	Silent	SNP	C	C	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	SDK1-138	NM_152744	exon17	c.C2427T	p.R809R	GTACCGCCTGGCT	.	114	62	97	2	.	0	0	0	0	0
CDK13	8621	broad.mit.edu;ucsc.edu;bcgsc.ca	37	7	40134339	40134339	+	Silent	SNP	T	T	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	CDK13-548	NM_003718	exon14	c.T4299C	p.P1433P	TGGTCCTATTGCA	.	147	35	107	2	.	2	1	1	0	0
ENTPD4	9583	broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	23294705	23294705	+	Silent	SNP	G	G	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ENTPD4-92	NM_004901	exon10	c.C1116T	p.D372D	TTTAATGTCTAGG	.	140	37	155	1	.	4	2	2	0	0
RAB11FIP1	80223	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	37729061	37729061	+	Missense_Mutation	SNP	G	G	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	RAB11FIP1-92	NM_001002814	exon4	c.C3259G	p.P1087A	TGCCAGGAGGCGG	.	69	30	45	0	.	0	0	0	0	0
EFCAB1	79645	broad.mit.edu;ucsc.edu;bcgsc.ca	37	8	49647695	49647695	+	Silent	SNP	G	G	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	EFCAB1-90	NM_024593	exon1	c.C16T	p.L6L	TCTGCAGTTTCTT	.	60	22	70	1	.	0	0	0	0	0
RUNX1T1	862	ucsc.edu;bcgsc.ca	37	8	93088202	93088202	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	RUNX1T1-1196	NM_001198628	exon2	c.T79C	p.Y27H	GACAATATTCAAA	.	43	12	66	1	.	0	0	0	0	0
GRINA	2907	broad.mit.edu	37	8	145065567	145065567	+	Missense_Mutation	SNP	A	A	C	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	GRINA-90	NM_001009184	exon2	c.A176C	p.H59P	ACCCCCATGGCCC	.	155	14	154	6	.	36	36	0	0	0
DOCK8	81704	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	441958	441958	+	Silent	SNP	C	C	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	DOCK8-517	NM_203447	exon42	c.C5439T	p.V1813V	GTTTGTCTACAAA	.	83	35	141	0	.	4	4	0	0	0
TAF1L	138474	ucsc.edu;bcgsc.ca	37	9	32632528	32632528	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	TAF1L-870	NM_153809	exon1	c.T3050C	p.L1017P	AGGGAAAGGCGAC	.	287	90	256	2	.	0	0	0	0	0
SHB	6461	broad.mit.edu	37	9	37956019	37956019	+	Missense_Mutation	SNP	A	A	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	SHB-92	NM_003028	exon4	c.T1087C	p.S363P	AGGGGGATGACTG	.	86	4	105	0	.	69	69	0	0	0
PRKACG	5568	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	71628289	71628289	+	Silent	SNP	G	G	A	rs140133619	alternate_allele	TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	PRKACG-1061	NM_002732	exon1	c.C720T	p.Y240Y	GTCGGCGTAGAAG	.	91	28	90	0	G|1.000;C|0.000	0	0	0	0	0
GDA	9615	broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	74838062	74838062	+	Silent	SNP	A	A	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	GDA-230	NM_004293	exon7	c.A633G	p.T211T	AGTGACACCACGT	.	88	19	146	1	.	16	7	9	0	0
ZNF462	58499	ucsc.edu;bcgsc.ca	37	9	109688639	109688639	+	Missense_Mutation	SNP	G	G	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ZNF462-95	NM_021224	exon3	c.G2446A	p.A816T	AATACTGCTCTGC	.	117	30	126	2	.	0	0	0	0	0
DNM1	1759	broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	130982346	130982346	+	Silent	SNP	G	G	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	DNM1-228	.	.	.	.	GAACAAGCTGCTC	.	153	46	154	0	.	4	0	4	0	0
URM1	81605	broad.mit.edu	37	9	131151640	131151640	+	Missense_Mutation	SNP	G	G	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	URM1-90	NM_001135947	exon4	c.G289T	p.V97L	GCTTCAGTGGGAA	.	95	4	72	0	.	0	0	0	0	0
MAMDC4	158056	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	9	139748712	139748712	+	Silent	SNP	C	C	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	MAMDC4-156	NM_206920	exon7	c.C720T	p.V240V	CAAGGTCTGCGTG	.	130	38	106	0	.	0	0	0	0	0
ATP7A	538	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	X	77268391	77268391	+	Missense_Mutation	SNP	T	T	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ATP7A-130	NM_000052	exon10	c.T2188A	p.Y730N	GGCTGGTACTTCT	.	38	22	48	0	.	0	0	0	0	0
FAM45B	55855	ucsc.edu	37	X	129629790	129629790	+	RNA	SNP	A	A	G	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic		WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	FAM45B-63	.	.	.	.	CACCTCAACGCCG	.	130	2	144	0	.	8	4	4	0	0
WDR65	149465	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	43675436	43675439	+	Frame_Shift_Del	DEL	TTGA	TTGA	-	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	TTGA	TTGA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	WDR65-91	NM_152498	exon11	c.1778_1781del	p.593_594del	.	.	67	19	59	0	.	0	0	0	0	0
ELTD1	64123	hgsc.bcm.edu;bcgsc.ca	37	1	79470814	79470814	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ELTD1-24	NM_022159	exon2	c.113delG	p.G38fs	.	.	82	20	175	0	.	0	0	0	0	0
SETDB1	9869	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	1	150900339	150900347	+	In_Frame_Del	DEL	AGATGGATT	AGATGGATT	-	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	AGATGGATT	AGATGGATT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	SETDB1-228	NM_012432	exon2	c.149_157del	p.50_53del	.	.	219	59	261	0	.	0	0	0	0	0
DNAH14	127602	hgsc.bcm.edu;bcgsc.ca	37	1	225512004	225512005	+	Frame_Shift_Del	DEL	CT	CT	-	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	CT	CT	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	DNAH14-23	NM_001373	exon61	c.9297_9298del	p.3099_3100del	.	.	127	29	175	0	.	0	0	0	0	0
DCHS1	8642	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	11	6652589	6652589	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	DCHS1-73	NM_003737	exon8	c.3725delA	p.K1242fs	.	.	77	21	78	0	.	0	0	0	0	0
MON2	23041	bcgsc.ca	37	12	62931886	62931886	+	Nonsense_Mutation	DEL	G	G	-	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	G	G	-	-	-	-	Unknown	Untested	Somatic	Phase_1	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	MON2-514	NM_015026	exon17	c.2129delG	p.W710X	TTGTGTGGATTCT	.	89	24	161	1	.	0	0	0	0	0
MEFV	4210	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	16	3304171	3304171	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	MEFV-228	NM_000243	exon2	c.897delA	p.E299fs	.	.	62	14	53	0	.	0	0	0	0	0
CHD3	1107	broad.mit.edu	37	17	7801857	7801859	+	In_Frame_Del	DEL	AAG	AAG	-	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	AAG	AAG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	CHD3-228	NM_001005271	exon13	c.2272_2274del	p.758_758del	AAGTATAAGAAGA	.	196	8	163	0	.	0	0	0	0	0
TEX14	56155	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	56676917	56676918	+	Frame_Shift_Del	DEL	GA	GA	-	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	GA	GA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	TEX14-810	NM_001201457	exon14	c.1806_1807del	p.602_603del	.	.	81	35	62	0	.	0	0	0	0	0
ANKRD29	147463	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	18	21214112	21214112	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ANKRD29-156	NM_173505	exon5	c.332delA	p.D111fs	.	.	53	16	55	0	.	0	0	0	0	0
FCGBP	8857	broad.mit.edu	37	19	40366441	40366444	+	Frame_Shift_Del	DEL	CGCA	CGCA	-	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	CGCA	CGCA	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none			Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	FCGBP-98	NM_003890	exon30	c.13790_13793del	p.4597_4598del	CGCAGGCGCACGA	.	98	8	129	0	.	0	0	0	0	0
NACAD	23148	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	7	45125173	45125173	+	Frame_Shift_Del	DEL	A	A	-	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	A	A	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	.	NM_001146334	exon2	c.606delT	p.A202fs	.	.	107	25	89	0	.	0	0	0	0	0
PIK3CG	5294	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	7	106508582	106508582	+	Frame_Shift_Del	DEL	C	C	-	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	C	C	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	PIK3CG-1316	NM_002649	exon2	c.576delC	p.D192fs	.	.	82	22	49	0	.	0	0	0	0	0
KDM6A	7403	hgsc.bcm.edu;bcgsc.ca	37	X	44918293	44918293	+	Frame_Shift_Del	DEL	T	T	-	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	T	T	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	KDM6A-2748	NM_021140	exon11	c.918delT	p.S306fs	.	.	163	50	295	0	.	0	0	0	0	0
CHD1L	9557	hgsc.bcm.edu	37	1	146747129	146747130	+	Frame_Shift_Ins	INS	-	-	A	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	CHD1L-231	NM_004284	exon13	c.1383_1384insA	p.N461fs	.	.	86	15	110	0	.	0	0	0	0	0
TOP2A	7153	hgsc.bcm.edu;broad.mit.edu;bcgsc.ca	37	17	38562843	38562844	+	Nonsense_Mutation	INS	-	-	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	TOP2A-655	NM_001067	exon15	c.1836_1837insA	p.Y612_Y613delinsX	.	.	70	31	103	0	.	0	0	0	0	0
SULT6B1	391365	hgsc.bcm.edu;bcgsc.ca	37	2	37414574	37414575	+	Frame_Shift_Ins	INS	-	-	T	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	-	-	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	SULT6B1-91	NM_001032377	exon2	c.122_123insA	p.I41fs	.	.	104	30	166	0	.	0	0	0	0	0
ABHD13	84945	hgsc.bcm.edu;broad.mit.edu;ucsc.edu;bcgsc.ca	37	13	108882148	108882149	+	Missense_Mutation	DNP	GG	GG	TT	novel		TCGA-IZ-A6M8-01A-11D-A31X-10	TCGA-IZ-A6M8-10A-01D-A31X-10	GG	GG	.	.	.	.	Unknown	Untested	Somatic	Phase_I	WXS	none	.	.	Illumina HiSeq	4dfdbda6-c66f-4c67-8b66-e44364185d82	63f41eeb-2753-4768-a87a-f24b16256074	.	ABHD13-93	NM_032859	exon2	c.G583T	p.LG194FC	TCCTTGGGTGGAG	.	89.0	25.0	129.0	0.0	.	0	0	0	0	0
