		Clinical Features	MRNA_CNMF		MRNA_CHIERARCHICAL		LINCRNA_CNMF		LINCRNA_CHIERARCHICAL		MIR_MATURE_CNMF		MIR_MATURE_CHIERARCHICAL		CN_CNMF		CN_THRESHOLDED_CNMF		METHYLATION_CNMF		METHYLATION_CHIERARCHICAL	
	nCNV (%)	nWild-Type	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q	Fisher's exact test_P	Fisher's exact test_Q
amp_6p24.3	47 (59%)	33	0.00279	0.00497	2e-05	4.12e-05	0.00060999	0.00112	9.9999e-06	2.14e-05	3e-05	6.06e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	0.00023	0.000435	9.9999e-06	2.14e-05
amp_8q11.22	48 (60%)	32	7.9999e-05	0.000157	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	2e-05	4.12e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05
amp_8q24.22	61 (76%)	19	0.00402	0.00709	0.00108	0.00197	9.9999e-06	2.14e-05	0.00033	0.000619	9.9999e-06	2.14e-05	2e-05	4.12e-05	0.00015	0.000289	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	7.9999e-05	0.000157
del_1p36.12	25 (31%)	55	0.195	0.271	0.01214	0.0209	0.051409	0.0818	0.057399	0.0906	0.89939	0.921	0.03368	0.0561	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	0.16033	0.231	0.22698	0.298
del_1p12	18 (22%)	62	0.01762	0.0296	0.14368	0.214	0.35423	0.443	0.36307	0.448	0.92435	0.929	0.04384	0.0714	2e-05	4.12e-05	9.9999e-06	2.14e-05	0.0167	0.0283	0.11923	0.18
del_2q37.2	4 (5%)	76	0.47441	0.562	0.91303	0.922	0.26299	0.339	0.01353	0.0231	0.6609	0.719	0.51207	0.59	0.7383	0.784	0.92975	0.93	0.6248	0.694	0.51033	0.59
del_3p25.2	42 (52%)	38	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05
del_3p25.1	42 (52%)	38	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05
del_3p22.2	42 (52%)	38	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05
del_3p14.2	43 (54%)	37	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05
del_3q24	44 (55%)	36	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05
del_3q29	44 (55%)	36	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05
del_3q29	44 (55%)	36	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05
del_5q23.1	4 (5%)	76	0.68897	0.746	0.91027	0.922	0.39833	0.486	0.65256	0.717	0.49656	0.583	0.6124	0.684	0.39572	0.486	0.723	0.779	0.16233	0.232	0.51101	0.59
del_6q25.3	26 (32%)	54	0.63365	0.7	0.14747	0.218	0.04602	0.0741	0.18304	0.256	0.04625	0.0741	0.57627	0.654	0.04388	0.0714	9.9999e-06	2.14e-05	0.00203	0.00364	0.22201	0.295
del_8p11.22	19 (24%)	61	0.00114	0.00206	8.9999e-05	0.000175	0.00022	0.00042	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	4e-05	8e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	9.9999e-06	2.14e-05	3e-05	6.06e-05
del_11q24.3	7 (9%)	73	0.83852	0.867	0.21793	0.291	0.074819	0.116	0.16039	0.231	0.24222	0.316	0.03635	0.0601	0.25683	0.333	0.45603	0.544	0.00463	0.0081	0.01015	0.0176
del_16q22.1	18 (22%)	62	0.21607	0.291	0.16523	0.234	0.65928	0.719	0.43296	0.526	0.21592	0.291	0.77317	0.816	0.31723	0.401	9.9999e-06	2.14e-05	0.22475	0.297	0.60012	0.678
del_16q23.3	19 (24%)	61	0.15751	0.23	0.088299	0.135	0.45153	0.542	0.35698	0.444	0.11391	0.173	0.78943	0.825	0.21077	0.289	9.9999e-06	2.14e-05	0.1244	0.187	0.44463	0.537
del_17q12	3 (4%)	77	0.14904	0.219	0.19827	0.274	0.00047	0.000873	0.060969	0.0955	0.7393	0.784	0.21777	0.291	0.51455	0.59	0.47632	0.562	0.065759	0.102	0.17279	0.244
del_18q22.2	4 (5%)	76	0.88203	0.908	0.52129	0.595	0.78439	0.824	0.32908	0.414	0.80134	0.833	0.61261	0.684	0.73883	0.784	0.29759	0.381	0.91234	0.922	0.30223	0.385
