Broad GDAC Analyses Status
analyses__2017_10_17 Run for Tumor Type: TCGA-LUAD

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PipelineNotRunInProcessSuccessfulUnsuccessful
1TP-Aggregate_Molecular_Subtype_Clusters1000
2TP-CopyNumber_Clustering_CNMF0010
3TP-CopyNumber_Clustering_CNMF_thresholded0010
4TP-CopyNumber_Gistic20010
5TP-CopyNumber_Gistic2_Postprocess_Focal0010
6TP-Correlate_Clinical_vs_CopyNumber_Arm0010
7TP-Correlate_Clinical_vs_CopyNumber_Focal0010
8TP-Correlate_Clinical_vs_Molecular_Subtypes1000
9TP-Correlate_Clinical_vs_mRNA0010
10TP-Correlate_Clinical_vs_Mutation1000
11TP-Correlate_Clinical_vs_Mutation_APOBEC_Categorical1000
12TP-Correlate_Clinical_vs_Mutation_APOBEC_Continuous1000
13TP-Correlate_Clinical_vs_MutationRate1000
14TP-Correlate_molecularSubtype_vs_CopyNumber_Arm1000
15TP-Correlate_molecularSubtype_vs_CopyNumber_Focal1000
16TP-Correlate_molecularSubtype_vs_Mutation1000
17TP-Methylation__HM27_Clustering_CNMF0010
18TP-Methylation__HM27_Clustering_Consensus_Plus0001
19TP-Methylation__HM27_Preprocess0010
20TP-Methylation__HM450_Clustering_CNMF0010
21TP-Methylation__HM450_Clustering_Consensus_Plus0001
22TP-Methylation__HM450_Preprocess0010
23TP-miR_Find_Direct_Targets0010
24TP-miR_Mature_Clustering_CNMF0010
25TP-miR_Mature_Clustering_Consensus_Plus0010
26TP-miR_Mature_Preprocess0010
27TP-mRNA_lincRNA_Clustering_CNMF0000
28TP-mRNA_lincRNA_Clustering_Consensus_Plus0010
29TP-mRNA_protein_coding_Clustering_CNMF0010
30TP-mRNA_protein_coding_Clustering_Consensus_Plus0010
31TP-Mutation_APOBEC1000
32TP-Mutation_Assessor1000
33TP-Mutation_MutSig2CV0001
34TP-Mutation_Signature_Analyzer1000
Total120183

CohortBCRClinicalCNmRNAmiRMAFMethylation
TCGA-LUAD584521518513513569577
TCGA-LUAD-FFPE1212121131211
TCGA-LUAD-NB4024014020000
TCGA-LUAD-NT1821821765946056
TCGA-LUAD-TP584521518513513569577
TCGA-LUAD-TR2222222

This page generated on Tue Dec 12 09:45:46 2017