Broad GDAC analyses__2017_10_17 Run Status : TCGA-PCPG

Note that the links below, when activated, will require FireCloud credentials. Sample counts are given at the bottom of page.

	Pipeline	NotRun	Successful	Unsuccessful
1	TP-Aggregate_Molecular_Subtype_Clusters	0	1	0
2	TP-CopyNumber_Clustering_CNMF	0	1	0
3	TP-CopyNumber_Clustering_CNMF_thresholded	0	1	0
4	TP-CopyNumber_Gistic2	0	1	0
5	TP-CopyNumber_Gistic2_Postprocess_Focal	0	1	0
6	TP-Correlate_Clinical_vs_CopyNumber_Arm	0	1	0
7	TP-Correlate_Clinical_vs_CopyNumber_Focal	0	1	0
8	TP-Correlate_Clinical_vs_Molecular_Subtypes	0	1	0
9	TP-Correlate_Clinical_vs_mRNA	0	1	0
10	TP-Correlate_Clinical_vs_Mutation	0	1	0
11	TP-Correlate_Clinical_vs_Mutation_APOBEC_Categorical	0	1	0
12	TP-Correlate_Clinical_vs_Mutation_APOBEC_Continuous	0	0	1
13	TP-Correlate_Clinical_vs_MutationRate	0	1	0
14	TP-Correlate_molecularSubtype_vs_CopyNumber_Arm	0	1	0
15	TP-Correlate_molecularSubtype_vs_CopyNumber_Focal	0	1	0
16	TP-Correlate_molecularSubtype_vs_Mutation	0	1	0
17	TP-Methylation__HM27_Clustering_CNMF	1	0	0
18	TP-Methylation__HM27_Clustering_Consensus_Plus	1	0	0
19	TP-Methylation__HM27_Preprocess	0	0	1
20	TP-Methylation__HM450_Clustering_CNMF	0	1	0
21	TP-Methylation__HM450_Clustering_Consensus_Plus	0	1	0
22	TP-Methylation__HM450_Preprocess	0	1	0
23	TP-miR_Find_Direct_Targets	0	1	0
24	TP-miR_Mature_Clustering_CNMF	0	1	0
25	TP-miR_Mature_Clustering_Consensus_Plus	0	1	0
26	TP-miR_Mature_Preprocess	0	1	0
27	TP-mRNA_lincRNA_Clustering_CNMF	0	1	0
28	TP-mRNA_lincRNA_Clustering_Consensus_Plus	0	1	0
29	TP-mRNA_protein_coding_Clustering_CNMF	0	1	0
30	TP-mRNA_protein_coding_Clustering_Consensus_Plus	0	1	0
31	TP-Mutation_APOBEC	0	1	0
32	TP-Mutation_Assessor	0	1	0
33	TP-Mutation_MutSig2CV	0	1	0
34	TP-Mutation_Signature_Analyzer	0	1	0
	Total	2	30	2

This page generated on Tue Dec 12 09:45:50 2017