Broad GDAC Analyses Status
analyses__2017_10_17 Run for Tumor Type: TCGA-BLCA
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Pipeline
NotRun
InProcess
Successful
Unsuccessful
1
TP-Aggregate_Analysis_Features
0
0
1
0
2
TP-Aggregate_Molecular_Subtype_Clusters
0
0
1
0
3
TP-CopyNumber_Clustering_CNMF
0
0
1
0
4
TP-CopyNumber_Clustering_CNMF_thresholded
0
0
1
0
5
TP-CopyNumber_Gistic2
0
0
1
0
6
TP-CopyNumber_Gistic2_Postprocess_Focal
0
0
1
0
7
TP-Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
8
TP-Correlate_Clinical_vs_CopyNumber_Focal
0
0
1
0
9
TP-Correlate_Clinical_vs_Molecular_Subtypes
0
0
1
0
10
TP-Correlate_Clinical_vs_mRNA
0
0
1
0
11
TP-Correlate_Clinical_vs_Mutation
0
0
1
0
12
TP-Correlate_Clinical_vs_Mutation_APOBEC_Categorical
0
0
1
0
13
TP-Correlate_Clinical_vs_Mutation_APOBEC_Continuous
0
0
1
0
14
TP-Correlate_Clinical_vs_MutationRate
0
0
1
0
15
TP-Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
1
0
16
TP-Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
1
0
17
TP-Correlate_molecularSubtype_vs_Mutation
0
0
1
0
18
TP-Methylation__HM27_Clustering_CNMF
1
0
0
0
19
TP-Methylation__HM27_Clustering_Consensus_Plus
1
0
0
0
20
TP-Methylation__HM27_Preprocess
0
0
0
1
21
TP-Methylation__HM450_Clustering_CNMF
0
0
1
0
22
TP-Methylation__HM450_Clustering_Consensus_Plus
0
0
1
0
23
TP-Methylation__HM450_Preprocess
0
0
1
0
24
TP-miR_Find_Direct_Targets
0
0
1
0
25
TP-miR_Mature_Clustering_CNMF
0
0
1
0
26
TP-miR_Mature_Clustering_Consensus_Plus
0
0
1
0
27
TP-miR_Mature_Preprocess
0
0
1
0
28
TP-mRNA_lincRNA_Clustering_CNMF
0
0
1
0
29
TP-mRNA_lincRNA_Clustering_Consensus_Plus
0
0
1
0
30
TP-mRNA_protein_coding_Clustering_CNMF
0
0
1
0
31
TP-mRNA_protein_coding_Clustering_Consensus_Plus
0
0
1
0
32
TP-Mutation_APOBEC
0
0
1
0
33
TP-Mutation_Assessor
0
0
1
0
34
TP-Mutation_MutSig2CV
1
0
0
0
35
TP-Mutation_Signature_Analyzer
0
0
1
0
Total
3
0
30
2
Cohort
BCR
Clinical
CN
mRNA
miR
MAF
Methylation
TCGA-BLCA
412
412
412
408
409
412
412
TCGA-BLCA-FFPE
3
3
2
3
3
3
3
TCGA-BLCA-NB
361
361
361
0
0
0
0
TCGA-BLCA-NT
36
36
34
19
19
0
21
TCGA-BLCA-TM
1
1
1
0
1
1
1
TCGA-BLCA-TP
412
412
412
408
409
412
412
This page generated on Fri Feb 9 16:18:17 2018