Broad GDAC Analyses Status
stddata__2017_09_19 Run for Tumor Type: TCGA-STAD

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PipelineNotRunInProcessSuccessfulUnsuccessful
1Clinical_Pick_Tier10010
2Merge_clinical0010
3Merge_CNV__snp60010
4Merge_CNV__unfiltered__snp60010
5Merge_methylation__HM270010
6Merge_methylation__HM4500010
7Merge_miR__geneExp0010
8Merge_miR__isoformExp0010
9Merge_mRNA__geneExp__FPKM0010
10Merge_mRNA__geneExpNormed__FPKM0010
11Merge_SNV__mutect0010
12mRNA_Preprocess0010
13TP-Clinical_Pick_Tier10010
14TP-Merge_clinical0010
15TP-Merge_CNV__snp60010
16TP-Merge_CNV__unfiltered__snp60010
17TP-Merge_methylation__HM270010
18TP-Merge_methylation__HM4500010
19TP-Merge_miR__geneExp0010
20TP-Merge_miR__isoformExp0010
21TP-Merge_mRNA__geneExp__FPKM0010
22TP-Merge_mRNA__geneExpNormed__FPKM0010
23TP-Merge_SNV__mutect0010
24TP-mRNA_Preprocess0010
25NT-Clinical_Pick_Tier10010
26NT-Merge_clinical0010
27NT-Merge_CNV__snp60010
28NT-Merge_CNV__unfiltered__snp60010
29NT-Merge_methylation__HM270010
30NT-Merge_methylation__HM4500010
31NT-Merge_miR__geneExp0010
32NT-Merge_miR__isoformExp0010
33NT-Merge_mRNA__geneExp__FPKM0010
34NT-Merge_mRNA__geneExpNormed__FPKM0010
35NT-Merge_SNV__mutect0001
36NT-mRNA_Preprocess0010
37NB-Clinical_Pick_Tier10010
38NB-Merge_clinical0010
39NB-Merge_CNV__snp60010
40NB-Merge_CNV__unfiltered__snp60010
41NB-Merge_methylation__HM270001
42NB-Merge_methylation__HM4500001
43NB-Merge_miR__geneExp0001
44NB-Merge_miR__isoformExp0010
45NB-Merge_mRNA__geneExp__FPKM0001
46NB-Merge_mRNA__geneExpNormed__FPKM0001
47NB-Merge_SNV__mutect0001
48NB-mRNA_Preprocess1000
Total10407

CohortBCRClinicalCNmRNAmiRMAFMethylation
TCGA-STAD443443442375436441443
TCGA-STAD-NB3693693690000
TCGA-STAD-NT9999953241027
TCGA-STAD-TP443443442375436441443

This page generated on Wed Sep 20 21:28:08 2017