Broad GDAC Standard Data Status
stddata__2017_10_17 Run for Tumor Type: TCGA-GBMLGG

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Pipeline DatasetNotAvailableInProcessSuccessfulUnsuccessful
1Clinical_Pick_Tier10010
2Merge_clinical0010
3Merge_CNV__snp60001
4Merge_CNV__unfiltered__snp60010
5Merge_methylation__HM270010
6Merge_methylation__HM4500010
7Merge_miR__geneExp0010
8Merge_miR__isoformExp0010
9Merge_mRNA__geneExp__FPKM0010
10Merge_mRNA__geneExpNormed__FPKM0010
11Merge_SNV__mutect0010
12mRNA_Preprocess1000
13TR-Clinical_Pick_Tier10010
14TR-Merge_clinical0010
15TR-Merge_CNV__snp60010
16TR-Merge_CNV__unfiltered__snp60010
17TR-Merge_methylation__HM270001
18TR-Merge_methylation__HM4500010
19TR-Merge_miR__geneExp0010
20TR-Merge_miR__isoformExp0010
21TR-Merge_mRNA__geneExp__FPKM0010
22TR-Merge_mRNA__geneExpNormed__FPKM0010
23TR-Merge_SNV__mutect0010
24TR-mRNA_Preprocess1000
25TP-Clinical_Pick_Tier10010
26TP-Merge_clinical0010
27TP-Merge_CNV__snp60010
28TP-Merge_CNV__unfiltered__snp60010
29TP-Merge_methylation__HM270010
30TP-Merge_methylation__HM4500010
31TP-Merge_miR__geneExp0010
32TP-Merge_miR__isoformExp0010
33TP-Merge_mRNA__geneExp__FPKM0010
34TP-Merge_mRNA__geneExpNormed__FPKM0010
35TP-Merge_SNV__mutect0010
36TP-mRNA_Preprocess1000
37NT-Clinical_Pick_Tier10010
38NT-Merge_clinical0010
39NT-Merge_CNV__snp60010
40NT-Merge_CNV__unfiltered__snp60010
41NT-Merge_methylation__HM270001
42NT-Merge_methylation__HM4500010
43NT-Merge_miR__geneExp0010
44NT-Merge_miR__isoformExp0010
45NT-Merge_mRNA__geneExp__FPKM0010
46NT-Merge_mRNA__geneExpNormed__FPKM0010
47NT-Merge_SNV__mutect0001
48NT-mRNA_Preprocess1000
49NBC-Clinical_Pick_Tier10010
50NBC-Merge_clinical0010
51NBC-Merge_CNV__snp60010
52NBC-Merge_CNV__unfiltered__snp60010
53NBC-Merge_methylation__HM270001
54NBC-Merge_methylation__HM4500001
55NBC-Merge_miR__geneExp0001
56NBC-Merge_miR__isoformExp0010
57NBC-Merge_mRNA__geneExp__FPKM0001
58NBC-Merge_mRNA__geneExpNormed__FPKM0001
59NBC-Merge_SNV__mutect0001
60NBC-mRNA_Preprocess1000
61NB-Clinical_Pick_Tier10010
62NB-Merge_clinical0010
63NB-Merge_CNV__snp60010
64NB-Merge_CNV__unfiltered__snp60010
65NB-Merge_methylation__HM270001
66NB-Merge_methylation__HM4500001
67NB-Merge_miR__geneExp0001
68NB-Merge_miR__isoformExp0010
69NB-Merge_mRNA__geneExp__FPKM0001
70NB-Merge_mRNA__geneExpNormed__FPKM0001
71NB-Merge_SNV__mutect0001
72NB-mRNA_Preprocess1000
Total605016

CohortBCRClinicalCNmRNAmiRMAFMethylation
TCGA-GBMLGG113111091104665512909937
TCGA-GBMLGG-NB9719719730000
TCGA-GBMLGG-NBC2220000
TCGA-GBMLGG-NT3328285502
TCGA-GBMLGG-TP113111091104665512909937
TCGA-GBMLGG-TR27272727142627

This page generated on Sat Dec 9 11:28:15 2017