Broad GDAC stddata__2017_10_17 Run Status : TCGA-GBMLGG

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	Pipeline Dataset	NotAvailable	Successful	Unsuccessful
1	Clinical_Pick_Tier1	0	1	0
2	Merge_clinical	0	1	0
3	Merge_CNV__snp6	0	0	1
4	Merge_CNV__unfiltered__snp6	0	1	0
5	Merge_methylation__HM27	0	1	0
6	Merge_methylation__HM450	0	1	0
7	Merge_miR__geneExp	0	1	0
8	Merge_miR__isoformExp	0	1	0
9	Merge_mRNA__geneExp__FPKM	0	1	0
10	Merge_mRNA__geneExpNormed__FPKM	0	1	0
11	Merge_SNV__mutect	0	1	0
12	mRNA_Preprocess	1	0	0
13	TR-Clinical_Pick_Tier1	0	1	0
14	TR-Merge_clinical	0	1	0
15	TR-Merge_CNV__snp6	0	1	0
16	TR-Merge_CNV__unfiltered__snp6	0	1	0
17	TR-Merge_methylation__HM27	0	0	1
18	TR-Merge_methylation__HM450	0	1	0
19	TR-Merge_miR__geneExp	0	1	0
20	TR-Merge_miR__isoformExp	0	1	0
21	TR-Merge_mRNA__geneExp__FPKM	0	1	0
22	TR-Merge_mRNA__geneExpNormed__FPKM	0	1	0
23	TR-Merge_SNV__mutect	0	1	0
24	TR-mRNA_Preprocess	1	0	0
25	TP-Clinical_Pick_Tier1	0	1	0
26	TP-Merge_clinical	0	1	0
27	TP-Merge_CNV__snp6	0	1	0
28	TP-Merge_CNV__unfiltered__snp6	0	1	0
29	TP-Merge_methylation__HM27	0	1	0
30	TP-Merge_methylation__HM450	0	1	0
31	TP-Merge_miR__geneExp	0	1	0
32	TP-Merge_miR__isoformExp	0	1	0
33	TP-Merge_mRNA__geneExp__FPKM	0	1	0
34	TP-Merge_mRNA__geneExpNormed__FPKM	0	1	0
35	TP-Merge_SNV__mutect	0	1	0
36	TP-mRNA_Preprocess	1	0	0
37	NT-Clinical_Pick_Tier1	0	1	0
38	NT-Merge_clinical	0	1	0
39	NT-Merge_CNV__snp6	0	1	0
40	NT-Merge_CNV__unfiltered__snp6	0	1	0
41	NT-Merge_methylation__HM27	0	0	1
42	NT-Merge_methylation__HM450	0	1	0
43	NT-Merge_miR__geneExp	0	1	0
44	NT-Merge_miR__isoformExp	0	1	0
45	NT-Merge_mRNA__geneExp__FPKM	0	1	0
46	NT-Merge_mRNA__geneExpNormed__FPKM	0	1	0
47	NT-Merge_SNV__mutect	0	0	1
48	NT-mRNA_Preprocess	1	0	0
49	NBC-Clinical_Pick_Tier1	0	1	0
50	NBC-Merge_clinical	0	1	0
51	NBC-Merge_CNV__snp6	0	1	0
52	NBC-Merge_CNV__unfiltered__snp6	0	1	0
53	NBC-Merge_methylation__HM27	0	0	1
54	NBC-Merge_methylation__HM450	0	0	1
55	NBC-Merge_miR__geneExp	0	0	1
56	NBC-Merge_miR__isoformExp	0	1	0
57	NBC-Merge_mRNA__geneExp__FPKM	0	0	1
58	NBC-Merge_mRNA__geneExpNormed__FPKM	0	0	1
59	NBC-Merge_SNV__mutect	0	0	1
60	NBC-mRNA_Preprocess	1	0	0
61	NB-Clinical_Pick_Tier1	0	1	0
62	NB-Merge_clinical	0	1	0
63	NB-Merge_CNV__snp6	0	1	0
64	NB-Merge_CNV__unfiltered__snp6	0	1	0
65	NB-Merge_methylation__HM27	0	0	1
66	NB-Merge_methylation__HM450	0	0	1
67	NB-Merge_miR__geneExp	0	0	1
68	NB-Merge_miR__isoformExp	0	1	0
69	NB-Merge_mRNA__geneExp__FPKM	0	0	1
70	NB-Merge_mRNA__geneExpNormed__FPKM	0	0	1
71	NB-Merge_SNV__mutect	0	0	1
72	NB-mRNA_Preprocess	1	0	0
	Total	6	50	16

Cohort	BCR	Clinical	CN	mRNA	miR	MAF	Methylation
TCGA-GBMLGG	1131	1109	1104	665	512	909	937
TCGA-GBMLGG-NB	971	971	973	0	0	0	0
TCGA-GBMLGG-NBC	2	2	2	0	0	0	0
TCGA-GBMLGG-NT	33	28	28	5	5	0	2
TCGA-GBMLGG-TP	1131	1109	1104	665	512	909	937
TCGA-GBMLGG-TR	27	27	27	27	14	26	27

This page generated on Sat Dec 9 11:28:15 2017

Broad GDAC Standard Data Status stddata__2017_10_17 Run for Tumor Type: TCGA-GBMLGG

Broad GDAC Standard Data Status
stddata__2017_10_17 Run for Tumor Type: TCGA-GBMLGG