Broad GDAC Standard Data Status
stddata__2017_10_17 Run for Tumor Type: TCGA-KICH

Note that the links below, when activated, will require FireCloud credentials. Sample counts are given at the bottom of page.

Pipeline DatasetNotAvailableInProcessSuccessfulUnsuccessful
1Clinical_Pick_Tier10010
2Merge_clinical0010
3Merge_CNV__snp60010
4Merge_CNV__unfiltered__snp60010
5Merge_methylation__HM270001
6Merge_methylation__HM4500010
7Merge_miR__geneExp0010
8Merge_miR__isoformExp0010
9Merge_mRNA__geneExp__FPKM0010
10Merge_mRNA__geneExpNormed__FPKM0010
11Merge_SNV__mutect0010
12mRNA_Preprocess1000
13TP-Clinical_Pick_Tier10010
14TP-Merge_clinical0010
15TP-Merge_CNV__snp60010
16TP-Merge_CNV__unfiltered__snp60010
17TP-Merge_methylation__HM270001
18TP-Merge_methylation__HM4500010
19TP-Merge_miR__geneExp0010
20TP-Merge_miR__isoformExp0010
21TP-Merge_mRNA__geneExp__FPKM0010
22TP-Merge_mRNA__geneExpNormed__FPKM0010
23TP-Merge_SNV__mutect0010
24TP-mRNA_Preprocess1000
25NT-Clinical_Pick_Tier10010
26NT-Merge_clinical0010
27NT-Merge_CNV__snp60010
28NT-Merge_CNV__unfiltered__snp60010
29NT-Merge_methylation__HM270001
30NT-Merge_methylation__HM4500001
31NT-Merge_miR__geneExp0010
32NT-Merge_miR__isoformExp0010
33NT-Merge_mRNA__geneExp__FPKM0010
34NT-Merge_mRNA__geneExpNormed__FPKM0010
35NT-Merge_SNV__mutect0001
36NT-mRNA_Preprocess1000
37NB-Clinical_Pick_Tier10010
38NB-Merge_clinical0010
39NB-Merge_CNV__snp60010
40NB-Merge_CNV__unfiltered__snp60010
41NB-Merge_methylation__HM270001
42NB-Merge_methylation__HM4500001
43NB-Merge_miR__geneExp0001
44NB-Merge_miR__isoformExp0010
45NB-Merge_mRNA__geneExp__FPKM0001
46NB-Merge_mRNA__geneExpNormed__FPKM0001
47NB-Merge_SNV__mutect0001
48NB-mRNA_Preprocess1000
Total403311

CohortBCRClinicalCNmRNAmiRMAFMethylation
TCGA-KICH1131136665666666
TCGA-KICH-NB9990000
TCGA-KICH-NT575757242500
TCGA-KICH-TP1131136665666666

This page generated on Sat Dec 9 11:28:17 2017