This pipeline computes the correlation between significant arm-level copy number variations (cnvs) and molecular subtypes.
Testing the association between copy number variation 52 arm-level events and 10 molecular subtypes across 123 patients, 317 significant findings detected with P value < 0.05 and Q value < 0.25.
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1p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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1q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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3q gain cnv correlated to 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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5p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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5q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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7p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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7q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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8p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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8q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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9p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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9q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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12p gain cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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12q gain cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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14q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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15q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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17q gain cnv correlated to 'RPPA_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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18p gain cnv correlated to 'MRNASEQ_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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18q gain cnv correlated to 'MRNASEQ_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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19p gain cnv correlated to 'CN_CNMF'.
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19q gain cnv correlated to 'CN_CNMF'.
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20p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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20q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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22q gain cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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xp gain cnv correlated to 'CN_CNMF'.
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xq gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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1p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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3p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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3q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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4p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CNMF'.
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4q loss cnv correlated to 'CN_CNMF'.
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6p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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6q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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9p loss cnv correlated to 'MRNASEQ_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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10p loss cnv correlated to 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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11p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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11q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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12p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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12q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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13q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', and 'RPPA_CHIERARCHICAL'.
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16p loss cnv correlated to 'RPPA_CNMF' and 'RPPA_CHIERARCHICAL'.
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16q loss cnv correlated to 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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17p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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17q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', and 'RPPA_CHIERARCHICAL'.
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18p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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18q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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19p loss cnv correlated to 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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19q loss cnv correlated to 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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21q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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22q loss cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', and 'MRNASEQ_CHIERARCHICAL'.
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xp loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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xq loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
Clinical Features |
CN CNMF |
METHLYATION CNMF |
RPPA CNMF |
RPPA CHIERARCHICAL |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nCNV (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
1p gain | 8 (7%) | 115 |
0.00022 (0.00127) |
0.0213 (0.0434) |
0.013 (0.0286) |
0.0352 (0.0618) |
0.00872 (0.0215) |
0.00256 (0.00843) |
0.0217 (0.0435) |
0.0213 (0.0434) |
0.00337 (0.0106) |
0.00663 (0.0181) |
1q gain | 22 (18%) | 101 |
1e-05 (0.000104) |
1e-05 (0.000104) |
1e-05 (0.000104) |
1e-05 (0.000104) |
1e-05 (0.000104) |
1e-05 (0.000104) |
1e-05 (0.000104) |
1e-05 (0.000104) |
1e-05 (0.000104) |
1e-05 (0.000104) |
5p gain | 11 (9%) | 112 |
1e-05 (0.000104) |
3e-05 (0.000233) |
0.0195 (0.0405) |
0.00308 (0.00983) |
0.00168 (0.00633) |
0.0014 (0.00552) |
0.00075 (0.00333) |
0.0132 (0.0289) |
4e-05 (0.000297) |
0.00202 (0.00739) |
5q gain | 9 (7%) | 114 |
2e-05 (0.000173) |
1e-05 (0.000104) |
0.0479 (0.0796) |
0.0102 (0.0241) |
0.00913 (0.0221) |
0.00709 (0.0189) |
0.0031 (0.00983) |
0.0163 (0.0343) |
0.00014 (0.000877) |
0.00348 (0.0108) |
7p gain | 16 (13%) | 107 |
1e-05 (0.000104) |
1e-05 (0.000104) |
0.00673 (0.0181) |
0.00387 (0.0118) |
1e-05 (0.000104) |
1e-05 (0.000104) |
1e-05 (0.000104) |
0.00016 (0.000967) |
1e-05 (0.000104) |
2e-05 (0.000173) |
7q gain | 16 (13%) | 107 |
1e-05 (0.000104) |
1e-05 (0.000104) |
0.00661 (0.0181) |
0.00429 (0.0129) |
1e-05 (0.000104) |
1e-05 (0.000104) |
5e-05 (0.000366) |
0.0002 (0.00118) |
1e-05 (0.000104) |
3e-05 (0.000233) |
3p loss | 12 (10%) | 111 |
3e-05 (0.000233) |
1e-05 (0.000104) |
0.00179 (0.0067) |
6e-05 (0.000422) |
0.00131 (0.00524) |
0.00073 (0.0033) |
0.00079 (0.00345) |
0.00445 (0.0133) |
2e-05 (0.000173) |
0.00065 (0.00299) |
6p loss | 20 (16%) | 103 |
1e-05 (0.000104) |
1e-05 (0.000104) |
2e-05 (0.000173) |
1e-05 (0.000104) |
1e-05 (0.000104) |
1e-05 (0.000104) |
1e-05 (0.000104) |
1e-05 (0.000104) |
1e-05 (0.000104) |
2e-05 (0.000173) |
6q loss | 19 (15%) | 104 |
1e-05 (0.000104) |
1e-05 (0.000104) |
2e-05 (0.000173) |
4e-05 (0.000297) |
1e-05 (0.000104) |
2e-05 (0.000173) |
2e-05 (0.000173) |
0.00029 (0.00157) |
1e-05 (0.000104) |
6e-05 (0.000422) |
8p gain | 12 (10%) | 111 |
0.0003 (0.00161) |
0.021 (0.0432) |
0.0582 (0.091) |
0.004 (0.0121) |
0.00052 (0.00248) |
0.0002 (0.00118) |
0.0008 (0.00347) |
0.00195 (0.00719) |
0.00013 (0.000835) |
0.00056 (0.00262) |
8q gain | 12 (10%) | 111 |
0.00038 (0.00196) |
0.0216 (0.0435) |
0.0595 (0.0919) |
0.00399 (0.0121) |
0.00053 (0.00251) |
0.00015 (0.000918) |
0.00066 (0.00301) |
0.00206 (0.00739) |
0.00011 (0.000743) |
0.00043 (0.00215) |
14q gain | 13 (11%) | 110 |
1e-05 (0.000104) |
1e-05 (0.000104) |
0.177 (0.23) |
0.0303 (0.056) |
4e-05 (0.000297) |
6e-05 (0.000422) |
0.00026 (0.00142) |
0.00012 (0.00079) |
1e-05 (0.000104) |
1e-05 (0.000104) |
3q loss | 7 (6%) | 116 |
0.00074 (0.00332) |
0.00024 (0.00134) |
0.00829 (0.0211) |
0.00115 (0.00467) |
0.0309 (0.0568) |
0.0314 (0.057) |
0.0336 (0.0596) |
0.0845 (0.126) |
0.00205 (0.00739) |
0.00844 (0.0213) |
11p loss | 9 (7%) | 114 |
1e-05 (0.000104) |
1e-05 (0.000104) |
0.00806 (0.0207) |
0.00115 (0.00467) |
0.00915 (0.0221) |
0.00695 (0.0186) |
0.00809 (0.0207) |
0.0524 (0.0851) |
0.00014 (0.000877) |
0.00781 (0.0204) |
11q loss | 7 (6%) | 116 |
2e-05 (0.000173) |
1e-05 (0.000104) |
0.0289 (0.0546) |
0.00605 (0.017) |
0.0314 (0.057) |
0.0137 (0.0296) |
0.0331 (0.059) |
0.115 (0.159) |
0.00225 (0.0076) |
0.00849 (0.0213) |
12p loss | 8 (7%) | 115 |
0.00471 (0.014) |
7e-05 (0.000485) |
0.011 (0.0249) |
0.00239 (0.00792) |
0.0077 (0.0203) |
0.0142 (0.0305) |
0.0219 (0.0437) |
0.0551 (0.0876) |
0.00313 (0.00986) |
0.0196 (0.0405) |
12q loss | 7 (6%) | 116 |
0.00221 (0.00756) |
3e-05 (0.000233) |
0.0109 (0.0249) |
0.0026 (0.0085) |
0.00798 (0.0206) |
0.0138 (0.0297) |
0.0337 (0.0596) |
0.122 (0.168) |
0.00209 (0.00743) |
0.0357 (0.0625) |
21q loss | 9 (7%) | 114 |
1e-05 (0.000104) |
1e-05 (0.000104) |
0.0113 (0.0254) |
0.00297 (0.00953) |
0.00669 (0.0181) |
0.0066 (0.0181) |
0.00857 (0.0213) |
0.0516 (0.0841) |
0.00022 (0.00127) |
0.00859 (0.0213) |
9p gain | 11 (9%) | 112 |
1e-05 (0.000104) |
0.00011 (0.000743) |
0.352 (0.4) |
0.384 (0.428) |
0.00038 (0.00196) |
0.001 (0.00416) |
0.0102 (0.0241) |
0.00636 (0.0177) |
0.00488 (0.0143) |
0.00099 (0.00416) |
9q gain | 11 (9%) | 112 |
1e-05 (0.000104) |
0.00012 (0.00079) |
0.352 (0.4) |
0.383 (0.428) |
0.00034 (0.0018) |
0.001 (0.00416) |
0.00982 (0.0234) |
0.00597 (0.0169) |
0.00529 (0.0152) |
0.00091 (0.00388) |
15q gain | 12 (10%) | 111 |
0.00013 (0.000835) |
3e-05 (0.000233) |
0.621 (0.663) |
0.663 (0.705) |
0.0206 (0.0425) |
0.00935 (0.0225) |
0.0135 (0.0294) |
0.0214 (0.0435) |
0.00156 (0.00592) |
0.00575 (0.0163) |
20p gain | 10 (8%) | 113 |
0.00052 (0.00248) |
0.0239 (0.0473) |
0.00218 (0.00751) |
0.00025 (0.00138) |
0.00142 (0.00555) |
0.00035 (0.00184) |
0.0534 (0.086) |
0.0106 (0.0244) |
0.0005 (0.00243) |
0.0544 (0.0871) |
20q gain | 10 (8%) | 113 |
0.00062 (0.00288) |
0.0244 (0.048) |
0.00218 (0.00751) |
0.00023 (0.0013) |
0.00151 (0.00581) |
0.00039 (0.00199) |
0.054 (0.0867) |
0.011 (0.0249) |
0.00047 (0.00233) |
0.0549 (0.0876) |
16q loss | 13 (11%) | 110 |
0.0568 (0.09) |
0.00524 (0.0151) |
0.0067 (0.0181) |
3e-05 (0.000233) |
1e-05 (0.000104) |
1e-05 (0.000104) |
0.0597 (0.0919) |
1e-05 (0.000104) |
0.00152 (0.00581) |
0.00079 (0.00345) |
17p loss | 14 (11%) | 109 |
0.022 (0.0439) |
0.00147 (0.0057) |
0.00015 (0.000918) |
0.00023 (0.0013) |
0.0178 (0.0373) |
0.00086 (0.0037) |
0.372 (0.417) |
0.0021 (0.00743) |
0.0282 (0.0541) |
0.0609 (0.0926) |
18p loss | 7 (6%) | 116 |
0.00187 (0.00695) |
0.00878 (0.0215) |
0.0105 (0.0244) |
0.0979 (0.144) |
0.031 (0.0568) |
0.0304 (0.056) |
0.013 (0.0286) |
0.0958 (0.141) |
0.00206 (0.00739) |
0.0439 (0.0743) |
18q loss | 7 (6%) | 116 |
0.00212 (0.00745) |
0.00835 (0.0212) |
0.0111 (0.025) |
0.0978 (0.144) |
0.0318 (0.057) |
0.0316 (0.057) |
0.0135 (0.0294) |
0.0941 (0.14) |
0.00225 (0.0076) |
0.0437 (0.0743) |
12p gain | 4 (3%) | 119 |
0.0282 (0.0541) |
0.147 (0.198) |
0.0606 (0.0926) |
0.0301 (0.056) |
0.00474 (0.014) |
0.00229 (0.00763) |
0.172 (0.227) |
0.0266 (0.0514) |
0.0455 (0.0761) |
0.172 (0.227) |
12q gain | 4 (3%) | 119 |
0.0288 (0.0546) |
0.147 (0.198) |
0.0606 (0.0926) |
0.0298 (0.056) |
0.00502 (0.0146) |
0.00218 (0.00751) |
0.173 (0.228) |
0.0262 (0.0509) |
0.0452 (0.0758) |
0.172 (0.227) |
xq loss | 4 (3%) | 119 |
0.0284 (0.0541) |
0.0363 (0.0634) |
0.0424 (0.0726) |
0.0149 (0.0317) |
0.0573 (0.0902) |
0.12 (0.165) |
0.0252 (0.0492) |
0.252 (0.308) |
0.0452 (0.0758) |
0.303 (0.36) |
xp loss | 7 (6%) | 116 |
0.00296 (0.00953) |
0.00912 (0.0221) |
0.207 (0.257) |
0.0986 (0.144) |
0.0301 (0.056) |
0.0318 (0.057) |
0.057 (0.0902) |
0.106 (0.15) |
0.00733 (0.0194) |
0.134 (0.183) |
3q gain | 5 (4%) | 118 |
0.257 (0.313) |
0.139 (0.189) |
0.0422 (0.0725) |
0.0145 (0.031) |
0.168 (0.225) |
0.0375 (0.0651) |
0.724 (0.766) |
0.00496 (0.0145) |
0.354 (0.4) |
0.169 (0.225) |
xq gain | 5 (4%) | 118 |
0.00113 (0.00466) |
0.00781 (0.0204) |
0.464 (0.51) |
0.334 (0.386) |
0.0482 (0.0798) |
0.0649 (0.0975) |
0.148 (0.199) |
0.274 (0.331) |
0.0122 (0.0273) |
0.103 (0.148) |
13q loss | 14 (11%) | 109 |
2e-05 (0.000173) |
0.00617 (0.0172) |
0.00955 (0.0229) |
0.0401 (0.0694) |
0.0648 (0.0975) |
0.0508 (0.0831) |
0.37 (0.415) |
0.582 (0.63) |
0.0591 (0.0918) |
0.355 (0.4) |
17q loss | 6 (5%) | 117 |
0.0106 (0.0244) |
0.00856 (0.0213) |
0.011 (0.0249) |
0.0027 (0.00877) |
0.303 (0.36) |
0.147 (0.198) |
0.273 (0.331) |
0.234 (0.287) |
0.0991 (0.145) |
0.435 (0.482) |
17q gain | 7 (6%) | 116 |
0.394 (0.438) |
0.22 (0.273) |
0.0331 (0.059) |
0.136 (0.186) |
0.0398 (0.0691) |
0.00349 (0.0108) |
0.774 (0.813) |
0.0689 (0.103) |
0.438 (0.483) |
0.396 (0.439) |
1p loss | 4 (3%) | 119 |
0.00543 (0.0155) |
0.00228 (0.00763) |
0.0576 (0.0905) |
0.123 (0.169) |
0.171 (0.227) |
0.526 (0.573) |
0.0465 (0.0775) |
0.302 (0.36) |
||
4p loss | 5 (4%) | 118 |
0.0079 (0.0205) |
0.0125 (0.0278) |
0.0496 (0.0817) |
0.0639 (0.0966) |
0.325 (0.382) |
0.387 (0.431) |
0.0531 (0.086) |
0.263 (0.32) |
||
10p loss | 3 (2%) | 120 |
0.599 (0.648) |
0.347 (0.398) |
0.0104 (0.0242) |
0.0216 (0.0435) |
1 (1.00) |
0.0158 (0.0333) |
0.74 (0.78) |
0.619 (0.663) |
||
19p loss | 3 (2%) | 120 |
0.103 (0.149) |
0.345 (0.397) |
0.00128 (0.00516) |
0.0005 (0.00243) |
0.196 (0.249) |
0.0103 (0.0242) |
0.106 (0.15) |
0.0583 (0.091) |
||
19q loss | 3 (2%) | 120 |
0.103 (0.148) |
0.349 (0.399) |
0.00136 (0.0054) |
0.0004 (0.00202) |
0.199 (0.249) |
0.0099 (0.0235) |
0.106 (0.15) |
0.0592 (0.0918) |
||
22q loss | 13 (11%) | 110 |
3e-05 (0.000233) |
0.113 (0.158) |
0.0609 (0.0926) |
0.0419 (0.0722) |
0.0948 (0.141) |
0.0447 (0.0754) |
0.113 (0.158) |
0.331 (0.385) |
0.0533 (0.086) |
0.338 (0.391) |
18p gain | 3 (2%) | 120 |
0.102 (0.148) |
0.177 (0.23) |
0.049 (0.081) |
0.0293 (0.0551) |
0.198 (0.249) |
0.285 (0.342) |
0.105 (0.15) |
0.502 (0.547) |
||
18q gain | 3 (2%) | 120 |
0.101 (0.147) |
0.179 (0.23) |
0.0499 (0.0818) |
0.0302 (0.056) |
0.197 (0.249) |
0.286 (0.342) |
0.106 (0.15) |
0.501 (0.547) |
||
22q gain | 5 (4%) | 118 |
0.035 (0.0617) |
0.0318 (0.057) |
0.176 (0.23) |
0.201 (0.252) |
0.274 (0.331) |
0.227 (0.279) |
0.326 (0.382) |
0.606 (0.654) |
0.224 (0.276) |
0.682 (0.722) |
9p loss | 4 (3%) | 119 |
0.251 (0.307) |
0.108 (0.152) |
0.178 (0.23) |
0.203 (0.253) |
0.0165 (0.0345) |
0.00363 (0.0112) |
1 (1.00) |
0.0597 (0.0919) |
1 (1.00) |
0.331 (0.385) |
16p loss | 5 (4%) | 118 |
0.127 (0.174) |
0.201 (0.252) |
0.0427 (0.0728) |
0.0149 (0.0317) |
0.196 (0.249) |
0.113 (0.158) |
0.321 (0.379) |
0.576 (0.625) |
0.226 (0.279) |
0.305 (0.361) |
19p gain | 3 (2%) | 120 |
0.0252 (0.0492) |
0.176 (0.23) |
0.355 (0.4) |
0.326 (0.382) |
0.195 (0.249) |
0.613 (0.659) |
0.106 (0.15) |
0.303 (0.36) |
||
19q gain | 3 (2%) | 120 |
0.0236 (0.0469) |
0.177 (0.23) |
0.353 (0.4) |
0.328 (0.383) |
0.198 (0.249) |
0.609 (0.656) |
0.107 (0.15) |
0.304 (0.36) |
||
xp gain | 3 (2%) | 120 |
0.0251 (0.0492) |
0.176 (0.23) |
0.355 (0.4) |
0.329 (0.383) |
0.195 (0.249) |
0.682 (0.722) |
0.105 (0.15) |
0.499 (0.546) |
||
4q loss | 4 (3%) | 119 |
0.0283 (0.0541) |
0.0615 (0.0932) |
0.139 (0.189) |
0.181 (0.232) |
0.438 (0.483) |
0.116 (0.16) |
0.104 (0.149) |
0.0855 (0.127) |
||
21q gain | 3 (2%) | 120 |
0.279 (0.335) |
0.349 (0.399) |
0.178 (0.23) |
0.205 (0.255) |
0.488 (0.535) |
0.189 (0.242) |
0.65 (0.693) |
0.343 (0.396) |
0.742 (0.781) |
0.62 (0.663) |
P value = 0.00022 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
1P GAIN MUTATED | 0 | 7 | 1 |
1P GAIN WILD-TYPE | 65 | 24 | 26 |
P value = 0.0213 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
1P GAIN MUTATED | 1 | 2 | 5 | 0 |
1P GAIN WILD-TYPE | 38 | 34 | 19 | 24 |
P value = 0.013 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
1P GAIN MUTATED | 5 | 0 | 1 |
1P GAIN WILD-TYPE | 22 | 24 | 38 |
P value = 0.0352 (Fisher's exact test), Q value = 0.062
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
1P GAIN MUTATED | 0 | 0 | 2 | 4 |
1P GAIN WILD-TYPE | 16 | 23 | 29 | 16 |
P value = 0.00872 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
1P GAIN MUTATED | 5 | 0 | 0 | 3 |
1P GAIN WILD-TYPE | 40 | 31 | 29 | 11 |
P value = 0.00256 (Fisher's exact test), Q value = 0.0084
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
1P GAIN MUTATED | 5 | 0 | 0 | 3 |
1P GAIN WILD-TYPE | 42 | 42 | 20 | 7 |
P value = 0.0217 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
1P GAIN MUTATED | 8 | 0 | 0 | 0 | 0 |
1P GAIN WILD-TYPE | 50 | 61 | 1 | 2 | 1 |
P value = 0.0213 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
1P GAIN MUTATED | 2 | 0 | 4 | 2 | 0 | 0 |
1P GAIN WILD-TYPE | 25 | 18 | 24 | 5 | 16 | 27 |
P value = 0.00337 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
1P GAIN MUTATED | 1 | 0 | 7 |
1P GAIN WILD-TYPE | 17 | 59 | 39 |
P value = 0.00663 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
1P GAIN MUTATED | 2 | 0 | 6 | 0 |
1P GAIN WILD-TYPE | 27 | 33 | 27 | 28 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
1Q GAIN MUTATED | 3 | 18 | 1 |
1Q GAIN WILD-TYPE | 62 | 13 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
1Q GAIN MUTATED | 2 | 6 | 14 | 0 |
1Q GAIN WILD-TYPE | 37 | 30 | 10 | 24 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
1Q GAIN MUTATED | 13 | 0 | 3 |
1Q GAIN WILD-TYPE | 14 | 24 | 36 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
1Q GAIN MUTATED | 0 | 0 | 4 | 12 |
1Q GAIN WILD-TYPE | 16 | 23 | 27 | 8 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
1Q GAIN MUTATED | 15 | 0 | 0 | 7 |
1Q GAIN WILD-TYPE | 30 | 31 | 29 | 7 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
1Q GAIN MUTATED | 15 | 0 | 0 | 7 |
1Q GAIN WILD-TYPE | 32 | 42 | 20 | 3 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
1Q GAIN MUTATED | 21 | 0 | 0 | 1 | 0 |
1Q GAIN WILD-TYPE | 37 | 61 | 1 | 1 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
1Q GAIN MUTATED | 7 | 0 | 10 | 5 | 0 | 0 |
1Q GAIN WILD-TYPE | 20 | 18 | 18 | 2 | 16 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
1Q GAIN MUTATED | 1 | 0 | 21 |
1Q GAIN WILD-TYPE | 17 | 59 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
1Q GAIN MUTATED | 7 | 0 | 15 | 0 |
1Q GAIN WILD-TYPE | 22 | 33 | 18 | 28 |
P value = 0.0422 (Fisher's exact test), Q value = 0.072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
3Q GAIN MUTATED | 3 | 0 | 0 |
3Q GAIN WILD-TYPE | 24 | 24 | 39 |
P value = 0.0145 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
3Q GAIN MUTATED | 0 | 0 | 0 | 3 |
3Q GAIN WILD-TYPE | 16 | 23 | 31 | 17 |
P value = 0.0375 (Fisher's exact test), Q value = 0.065
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
3Q GAIN MUTATED | 2 | 0 | 1 | 2 |
3Q GAIN WILD-TYPE | 45 | 42 | 19 | 8 |
P value = 0.00496 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
3Q GAIN MUTATED | 0 | 0 | 1 | 2 | 2 | 0 |
3Q GAIN WILD-TYPE | 27 | 18 | 27 | 5 | 14 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
5P GAIN MUTATED | 0 | 11 | 0 |
5P GAIN WILD-TYPE | 65 | 20 | 27 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
5P GAIN MUTATED | 0 | 2 | 9 | 0 |
5P GAIN WILD-TYPE | 39 | 34 | 15 | 24 |
P value = 0.0195 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
5P GAIN MUTATED | 6 | 1 | 1 |
5P GAIN WILD-TYPE | 21 | 23 | 38 |
P value = 0.00308 (Fisher's exact test), Q value = 0.0098
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
5P GAIN MUTATED | 1 | 0 | 1 | 6 |
5P GAIN WILD-TYPE | 15 | 23 | 30 | 14 |
P value = 0.00168 (Fisher's exact test), Q value = 0.0063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
5P GAIN MUTATED | 8 | 0 | 0 | 3 |
5P GAIN WILD-TYPE | 37 | 31 | 29 | 11 |
P value = 0.0014 (Fisher's exact test), Q value = 0.0055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
5P GAIN MUTATED | 9 | 0 | 0 | 2 |
5P GAIN WILD-TYPE | 38 | 42 | 20 | 8 |
P value = 0.00075 (Fisher's exact test), Q value = 0.0033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
5P GAIN MUTATED | 10 | 0 | 0 | 1 | 0 |
5P GAIN WILD-TYPE | 48 | 61 | 1 | 1 | 1 |
P value = 0.0132 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
5P GAIN MUTATED | 6 | 0 | 4 | 1 | 0 | 0 |
5P GAIN WILD-TYPE | 21 | 18 | 24 | 6 | 16 | 27 |
P value = 4e-05 (Fisher's exact test), Q value = 3e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
5P GAIN MUTATED | 0 | 0 | 11 |
5P GAIN WILD-TYPE | 18 | 59 | 35 |
P value = 0.00202 (Fisher's exact test), Q value = 0.0074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
5P GAIN MUTATED | 6 | 0 | 5 | 0 |
5P GAIN WILD-TYPE | 23 | 33 | 28 | 28 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
5Q GAIN MUTATED | 0 | 9 | 0 |
5Q GAIN WILD-TYPE | 65 | 22 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
5Q GAIN MUTATED | 0 | 1 | 8 | 0 |
5Q GAIN WILD-TYPE | 39 | 35 | 16 | 24 |
P value = 0.0479 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
5Q GAIN MUTATED | 5 | 1 | 1 |
5Q GAIN WILD-TYPE | 22 | 23 | 38 |
P value = 0.0102 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
5Q GAIN MUTATED | 1 | 0 | 1 | 5 |
5Q GAIN WILD-TYPE | 15 | 23 | 30 | 15 |
P value = 0.00913 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
5Q GAIN MUTATED | 7 | 0 | 0 | 2 |
5Q GAIN WILD-TYPE | 38 | 31 | 29 | 12 |
P value = 0.00709 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
5Q GAIN MUTATED | 8 | 0 | 0 | 1 |
5Q GAIN WILD-TYPE | 39 | 42 | 20 | 9 |
P value = 0.0031 (Fisher's exact test), Q value = 0.0098
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
5Q GAIN MUTATED | 8 | 0 | 0 | 1 | 0 |
5Q GAIN WILD-TYPE | 50 | 61 | 1 | 1 | 1 |
P value = 0.0163 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
5Q GAIN MUTATED | 6 | 0 | 3 | 0 | 0 | 0 |
5Q GAIN WILD-TYPE | 21 | 18 | 25 | 7 | 16 | 27 |
P value = 0.00014 (Fisher's exact test), Q value = 0.00088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
5Q GAIN MUTATED | 0 | 0 | 9 |
5Q GAIN WILD-TYPE | 18 | 59 | 37 |
P value = 0.00348 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
5Q GAIN MUTATED | 6 | 0 | 3 | 0 |
5Q GAIN WILD-TYPE | 23 | 33 | 30 | 28 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
7P GAIN MUTATED | 0 | 16 | 0 |
7P GAIN WILD-TYPE | 65 | 15 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
7P GAIN MUTATED | 1 | 1 | 14 | 0 |
7P GAIN WILD-TYPE | 38 | 35 | 10 | 24 |
P value = 0.00673 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
7P GAIN MUTATED | 8 | 1 | 2 |
7P GAIN WILD-TYPE | 19 | 23 | 37 |
P value = 0.00387 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
7P GAIN MUTATED | 1 | 0 | 3 | 7 |
7P GAIN WILD-TYPE | 15 | 23 | 28 | 13 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
7P GAIN MUTATED | 16 | 0 | 0 | 0 |
7P GAIN WILD-TYPE | 29 | 31 | 29 | 14 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
7P GAIN MUTATED | 16 | 0 | 0 | 0 |
7P GAIN WILD-TYPE | 31 | 42 | 20 | 10 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
7P GAIN MUTATED | 15 | 0 | 0 | 1 | 0 |
7P GAIN WILD-TYPE | 43 | 61 | 1 | 1 | 1 |
P value = 0.00016 (Fisher's exact test), Q value = 0.00097
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
7P GAIN MUTATED | 9 | 0 | 7 | 0 | 0 | 0 |
7P GAIN WILD-TYPE | 18 | 18 | 21 | 7 | 16 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
7P GAIN MUTATED | 0 | 0 | 16 |
7P GAIN WILD-TYPE | 18 | 59 | 30 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
7P GAIN MUTATED | 10 | 0 | 6 | 0 |
7P GAIN WILD-TYPE | 19 | 33 | 27 | 28 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
7Q GAIN MUTATED | 0 | 16 | 0 |
7Q GAIN WILD-TYPE | 65 | 15 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
7Q GAIN MUTATED | 1 | 1 | 14 | 0 |
7Q GAIN WILD-TYPE | 38 | 35 | 10 | 24 |
P value = 0.00661 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
7Q GAIN MUTATED | 8 | 1 | 2 |
7Q GAIN WILD-TYPE | 19 | 23 | 37 |
P value = 0.00429 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
7Q GAIN MUTATED | 1 | 0 | 3 | 7 |
7Q GAIN WILD-TYPE | 15 | 23 | 28 | 13 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
7Q GAIN MUTATED | 16 | 0 | 0 | 0 |
7Q GAIN WILD-TYPE | 29 | 31 | 29 | 14 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
7Q GAIN MUTATED | 16 | 0 | 0 | 0 |
7Q GAIN WILD-TYPE | 31 | 42 | 20 | 10 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
7Q GAIN MUTATED | 15 | 0 | 0 | 1 | 0 |
7Q GAIN WILD-TYPE | 43 | 61 | 1 | 1 | 1 |
P value = 2e-04 (Fisher's exact test), Q value = 0.0012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
7Q GAIN MUTATED | 9 | 0 | 7 | 0 | 0 | 0 |
7Q GAIN WILD-TYPE | 18 | 18 | 21 | 7 | 16 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
7Q GAIN MUTATED | 0 | 0 | 16 |
7Q GAIN WILD-TYPE | 18 | 59 | 30 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
7Q GAIN MUTATED | 10 | 0 | 6 | 0 |
7Q GAIN WILD-TYPE | 19 | 33 | 27 | 28 |
P value = 3e-04 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
8P GAIN MUTATED | 2 | 9 | 1 |
8P GAIN WILD-TYPE | 63 | 22 | 26 |
P value = 0.021 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
8P GAIN MUTATED | 2 | 4 | 6 | 0 |
8P GAIN WILD-TYPE | 37 | 32 | 18 | 24 |
P value = 0.004 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
8P GAIN MUTATED | 1 | 0 | 3 | 7 |
8P GAIN WILD-TYPE | 15 | 23 | 28 | 13 |
P value = 0.00052 (Fisher's exact test), Q value = 0.0025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
8P GAIN MUTATED | 8 | 0 | 0 | 4 |
8P GAIN WILD-TYPE | 37 | 31 | 29 | 10 |
P value = 2e-04 (Fisher's exact test), Q value = 0.0012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
8P GAIN MUTATED | 8 | 0 | 0 | 4 |
8P GAIN WILD-TYPE | 39 | 42 | 20 | 6 |
P value = 8e-04 (Fisher's exact test), Q value = 0.0035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
8P GAIN MUTATED | 12 | 0 | 0 | 0 | 0 |
8P GAIN WILD-TYPE | 46 | 61 | 1 | 2 | 1 |
P value = 0.00195 (Fisher's exact test), Q value = 0.0072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
8P GAIN MUTATED | 4 | 0 | 5 | 3 | 0 | 0 |
8P GAIN WILD-TYPE | 23 | 18 | 23 | 4 | 16 | 27 |
P value = 0.00013 (Fisher's exact test), Q value = 0.00083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
8P GAIN MUTATED | 2 | 0 | 10 |
8P GAIN WILD-TYPE | 16 | 59 | 36 |
P value = 0.00056 (Fisher's exact test), Q value = 0.0026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
8P GAIN MUTATED | 4 | 0 | 8 | 0 |
8P GAIN WILD-TYPE | 25 | 33 | 25 | 28 |
P value = 0.00038 (Fisher's exact test), Q value = 0.002
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
8Q GAIN MUTATED | 2 | 9 | 1 |
8Q GAIN WILD-TYPE | 63 | 22 | 26 |
P value = 0.0216 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
8Q GAIN MUTATED | 2 | 4 | 6 | 0 |
8Q GAIN WILD-TYPE | 37 | 32 | 18 | 24 |
P value = 0.00399 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
8Q GAIN MUTATED | 1 | 0 | 3 | 7 |
8Q GAIN WILD-TYPE | 15 | 23 | 28 | 13 |
P value = 0.00053 (Fisher's exact test), Q value = 0.0025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
8Q GAIN MUTATED | 8 | 0 | 0 | 4 |
8Q GAIN WILD-TYPE | 37 | 31 | 29 | 10 |
P value = 0.00015 (Fisher's exact test), Q value = 0.00092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
8Q GAIN MUTATED | 8 | 0 | 0 | 4 |
8Q GAIN WILD-TYPE | 39 | 42 | 20 | 6 |
P value = 0.00066 (Fisher's exact test), Q value = 0.003
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
8Q GAIN MUTATED | 12 | 0 | 0 | 0 | 0 |
8Q GAIN WILD-TYPE | 46 | 61 | 1 | 2 | 1 |
P value = 0.00206 (Fisher's exact test), Q value = 0.0074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
8Q GAIN MUTATED | 4 | 0 | 5 | 3 | 0 | 0 |
8Q GAIN WILD-TYPE | 23 | 18 | 23 | 4 | 16 | 27 |
P value = 0.00011 (Fisher's exact test), Q value = 0.00074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
8Q GAIN MUTATED | 2 | 0 | 10 |
8Q GAIN WILD-TYPE | 16 | 59 | 36 |
P value = 0.00043 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
8Q GAIN MUTATED | 4 | 0 | 8 | 0 |
8Q GAIN WILD-TYPE | 25 | 33 | 25 | 28 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
9P GAIN MUTATED | 0 | 11 | 0 |
9P GAIN WILD-TYPE | 65 | 20 | 27 |
P value = 0.00011 (Fisher's exact test), Q value = 0.00074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
9P GAIN MUTATED | 2 | 0 | 8 | 1 |
9P GAIN WILD-TYPE | 37 | 36 | 16 | 23 |
P value = 0.00038 (Fisher's exact test), Q value = 0.002
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
9P GAIN MUTATED | 10 | 0 | 0 | 0 |
9P GAIN WILD-TYPE | 35 | 31 | 29 | 14 |
P value = 0.001 (Fisher's exact test), Q value = 0.0042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
9P GAIN MUTATED | 10 | 0 | 0 | 0 |
9P GAIN WILD-TYPE | 37 | 42 | 20 | 10 |
P value = 0.0102 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
9P GAIN MUTATED | 9 | 1 | 0 | 1 | 0 |
9P GAIN WILD-TYPE | 49 | 60 | 1 | 1 | 1 |
P value = 0.00636 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
9P GAIN MUTATED | 8 | 0 | 2 | 0 | 0 | 1 |
9P GAIN WILD-TYPE | 19 | 18 | 26 | 7 | 16 | 26 |
P value = 0.00488 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
9P GAIN MUTATED | 1 | 1 | 9 |
9P GAIN WILD-TYPE | 17 | 58 | 37 |
P value = 0.00099 (Fisher's exact test), Q value = 0.0042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
9P GAIN MUTATED | 8 | 0 | 2 | 1 |
9P GAIN WILD-TYPE | 21 | 33 | 31 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
9Q GAIN MUTATED | 0 | 11 | 0 |
9Q GAIN WILD-TYPE | 65 | 20 | 27 |
P value = 0.00012 (Fisher's exact test), Q value = 0.00079
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
9Q GAIN MUTATED | 2 | 0 | 8 | 1 |
9Q GAIN WILD-TYPE | 37 | 36 | 16 | 23 |
P value = 0.00034 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
9Q GAIN MUTATED | 10 | 0 | 0 | 0 |
9Q GAIN WILD-TYPE | 35 | 31 | 29 | 14 |
P value = 0.001 (Fisher's exact test), Q value = 0.0042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
9Q GAIN MUTATED | 10 | 0 | 0 | 0 |
9Q GAIN WILD-TYPE | 37 | 42 | 20 | 10 |
P value = 0.00982 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
9Q GAIN MUTATED | 9 | 1 | 0 | 1 | 0 |
9Q GAIN WILD-TYPE | 49 | 60 | 1 | 1 | 1 |
P value = 0.00597 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
9Q GAIN MUTATED | 8 | 0 | 2 | 0 | 0 | 1 |
9Q GAIN WILD-TYPE | 19 | 18 | 26 | 7 | 16 | 26 |
P value = 0.00529 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
9Q GAIN MUTATED | 1 | 1 | 9 |
9Q GAIN WILD-TYPE | 17 | 58 | 37 |
P value = 0.00091 (Fisher's exact test), Q value = 0.0039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
9Q GAIN MUTATED | 8 | 0 | 2 | 1 |
9Q GAIN WILD-TYPE | 21 | 33 | 31 | 27 |
P value = 0.0282 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
12P GAIN MUTATED | 0 | 3 | 1 |
12P GAIN WILD-TYPE | 65 | 28 | 26 |
P value = 0.0301 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
12P GAIN MUTATED | 1 | 0 | 0 | 3 |
12P GAIN WILD-TYPE | 15 | 23 | 31 | 17 |
P value = 0.00474 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
12P GAIN MUTATED | 1 | 0 | 0 | 3 |
12P GAIN WILD-TYPE | 44 | 31 | 29 | 11 |
P value = 0.00229 (Fisher's exact test), Q value = 0.0076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
12P GAIN MUTATED | 1 | 0 | 0 | 3 |
12P GAIN WILD-TYPE | 46 | 42 | 20 | 7 |
P value = 0.0266 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
12P GAIN MUTATED | 1 | 0 | 1 | 2 | 0 | 0 |
12P GAIN WILD-TYPE | 26 | 18 | 27 | 5 | 16 | 27 |
P value = 0.0455 (Fisher's exact test), Q value = 0.076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
12P GAIN MUTATED | 0 | 0 | 4 |
12P GAIN WILD-TYPE | 18 | 59 | 42 |
P value = 0.0288 (Fisher's exact test), Q value = 0.055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
12Q GAIN MUTATED | 0 | 3 | 1 |
12Q GAIN WILD-TYPE | 65 | 28 | 26 |
P value = 0.0298 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
12Q GAIN MUTATED | 1 | 0 | 0 | 3 |
12Q GAIN WILD-TYPE | 15 | 23 | 31 | 17 |
P value = 0.00502 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
12Q GAIN MUTATED | 1 | 0 | 0 | 3 |
12Q GAIN WILD-TYPE | 44 | 31 | 29 | 11 |
P value = 0.00218 (Fisher's exact test), Q value = 0.0075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
12Q GAIN MUTATED | 1 | 0 | 0 | 3 |
12Q GAIN WILD-TYPE | 46 | 42 | 20 | 7 |
P value = 0.0262 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
12Q GAIN MUTATED | 1 | 0 | 1 | 2 | 0 | 0 |
12Q GAIN WILD-TYPE | 26 | 18 | 27 | 5 | 16 | 27 |
P value = 0.0452 (Fisher's exact test), Q value = 0.076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
12Q GAIN MUTATED | 0 | 0 | 4 |
12Q GAIN WILD-TYPE | 18 | 59 | 42 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
14Q GAIN MUTATED | 0 | 13 | 0 |
14Q GAIN WILD-TYPE | 65 | 18 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
14Q GAIN MUTATED | 2 | 1 | 10 | 0 |
14Q GAIN WILD-TYPE | 37 | 35 | 14 | 24 |
P value = 0.0303 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
14Q GAIN MUTATED | 1 | 0 | 2 | 5 |
14Q GAIN WILD-TYPE | 15 | 23 | 29 | 15 |
P value = 4e-05 (Fisher's exact test), Q value = 3e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
14Q GAIN MUTATED | 13 | 0 | 0 | 0 |
14Q GAIN WILD-TYPE | 32 | 31 | 29 | 14 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
14Q GAIN MUTATED | 13 | 0 | 0 | 0 |
14Q GAIN WILD-TYPE | 34 | 42 | 20 | 10 |
P value = 0.00026 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
14Q GAIN MUTATED | 12 | 0 | 0 | 1 | 0 |
14Q GAIN WILD-TYPE | 46 | 61 | 1 | 1 | 1 |
P value = 0.00012 (Fisher's exact test), Q value = 0.00079
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
14Q GAIN MUTATED | 10 | 0 | 3 | 0 | 0 | 0 |
14Q GAIN WILD-TYPE | 17 | 18 | 25 | 7 | 16 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
14Q GAIN MUTATED | 0 | 0 | 13 |
14Q GAIN WILD-TYPE | 18 | 59 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
14Q GAIN MUTATED | 10 | 0 | 3 | 0 |
14Q GAIN WILD-TYPE | 19 | 33 | 30 | 28 |
P value = 0.00013 (Fisher's exact test), Q value = 0.00083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
15Q GAIN MUTATED | 1 | 9 | 2 |
15Q GAIN WILD-TYPE | 64 | 22 | 25 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
15Q GAIN MUTATED | 2 | 1 | 9 | 0 |
15Q GAIN WILD-TYPE | 37 | 35 | 15 | 24 |
P value = 0.0206 (Fisher's exact test), Q value = 0.042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
15Q GAIN MUTATED | 8 | 0 | 1 | 2 |
15Q GAIN WILD-TYPE | 37 | 31 | 28 | 12 |
P value = 0.00935 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
15Q GAIN MUTATED | 9 | 0 | 1 | 1 |
15Q GAIN WILD-TYPE | 38 | 42 | 19 | 9 |
P value = 0.0135 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
15Q GAIN MUTATED | 11 | 1 | 0 | 0 | 0 |
15Q GAIN WILD-TYPE | 47 | 60 | 1 | 2 | 1 |
P value = 0.0214 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
15Q GAIN MUTATED | 6 | 0 | 5 | 0 | 1 | 0 |
15Q GAIN WILD-TYPE | 21 | 18 | 23 | 7 | 15 | 27 |
P value = 0.00156 (Fisher's exact test), Q value = 0.0059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
15Q GAIN MUTATED | 1 | 1 | 10 |
15Q GAIN WILD-TYPE | 17 | 58 | 36 |
P value = 0.00575 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
15Q GAIN MUTATED | 7 | 1 | 4 | 0 |
15Q GAIN WILD-TYPE | 22 | 32 | 29 | 28 |
P value = 0.0331 (Fisher's exact test), Q value = 0.059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
17Q GAIN MUTATED | 4 | 2 | 0 |
17Q GAIN WILD-TYPE | 23 | 22 | 39 |
P value = 0.0398 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
17Q GAIN MUTATED | 2 | 0 | 2 | 3 |
17Q GAIN WILD-TYPE | 43 | 31 | 27 | 11 |
P value = 0.00349 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
17Q GAIN MUTATED | 2 | 0 | 2 | 3 |
17Q GAIN WILD-TYPE | 45 | 42 | 18 | 7 |
P value = 0.049 (Fisher's exact test), Q value = 0.081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
18P GAIN MUTATED | 1 | 0 | 0 | 2 |
18P GAIN WILD-TYPE | 44 | 31 | 29 | 12 |
P value = 0.0293 (Fisher's exact test), Q value = 0.055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
18P GAIN MUTATED | 1 | 0 | 0 | 2 |
18P GAIN WILD-TYPE | 46 | 42 | 20 | 8 |
P value = 0.0499 (Fisher's exact test), Q value = 0.082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
18Q GAIN MUTATED | 1 | 0 | 0 | 2 |
18Q GAIN WILD-TYPE | 44 | 31 | 29 | 12 |
P value = 0.0302 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
18Q GAIN MUTATED | 1 | 0 | 0 | 2 |
18Q GAIN WILD-TYPE | 46 | 42 | 20 | 8 |
P value = 0.0252 (Fisher's exact test), Q value = 0.049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
19P GAIN MUTATED | 0 | 3 | 0 |
19P GAIN WILD-TYPE | 65 | 28 | 27 |
P value = 0.0236 (Fisher's exact test), Q value = 0.047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
19Q GAIN MUTATED | 0 | 3 | 0 |
19Q GAIN WILD-TYPE | 65 | 28 | 27 |
P value = 0.00052 (Fisher's exact test), Q value = 0.0025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
20P GAIN MUTATED | 1 | 8 | 1 |
20P GAIN WILD-TYPE | 64 | 23 | 26 |
P value = 0.0239 (Fisher's exact test), Q value = 0.047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
20P GAIN MUTATED | 1 | 4 | 5 | 0 |
20P GAIN WILD-TYPE | 38 | 32 | 19 | 24 |
P value = 0.00218 (Fisher's exact test), Q value = 0.0075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
20P GAIN MUTATED | 6 | 1 | 0 |
20P GAIN WILD-TYPE | 21 | 23 | 39 |
P value = 0.00025 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
20P GAIN MUTATED | 1 | 0 | 0 | 6 |
20P GAIN WILD-TYPE | 15 | 23 | 31 | 14 |
P value = 0.00142 (Fisher's exact test), Q value = 0.0056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
20P GAIN MUTATED | 6 | 0 | 0 | 4 |
20P GAIN WILD-TYPE | 39 | 31 | 29 | 10 |
P value = 0.00035 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
20P GAIN MUTATED | 6 | 0 | 0 | 4 |
20P GAIN WILD-TYPE | 41 | 42 | 20 | 6 |
P value = 0.0106 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
20P GAIN MUTATED | 3 | 0 | 3 | 3 | 1 | 0 |
20P GAIN WILD-TYPE | 24 | 18 | 25 | 4 | 15 | 27 |
P value = 5e-04 (Fisher's exact test), Q value = 0.0024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
20P GAIN MUTATED | 1 | 0 | 9 |
20P GAIN WILD-TYPE | 17 | 59 | 37 |
P value = 0.00062 (Fisher's exact test), Q value = 0.0029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
20Q GAIN MUTATED | 1 | 8 | 1 |
20Q GAIN WILD-TYPE | 64 | 23 | 26 |
P value = 0.0244 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
20Q GAIN MUTATED | 1 | 4 | 5 | 0 |
20Q GAIN WILD-TYPE | 38 | 32 | 19 | 24 |
P value = 0.00218 (Fisher's exact test), Q value = 0.0075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
20Q GAIN MUTATED | 6 | 1 | 0 |
20Q GAIN WILD-TYPE | 21 | 23 | 39 |
P value = 0.00023 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
20Q GAIN MUTATED | 1 | 0 | 0 | 6 |
20Q GAIN WILD-TYPE | 15 | 23 | 31 | 14 |
P value = 0.00151 (Fisher's exact test), Q value = 0.0058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
20Q GAIN MUTATED | 6 | 0 | 0 | 4 |
20Q GAIN WILD-TYPE | 39 | 31 | 29 | 10 |
P value = 0.00039 (Fisher's exact test), Q value = 0.002
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
20Q GAIN MUTATED | 6 | 0 | 0 | 4 |
20Q GAIN WILD-TYPE | 41 | 42 | 20 | 6 |
P value = 0.011 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
20Q GAIN MUTATED | 3 | 0 | 3 | 3 | 1 | 0 |
20Q GAIN WILD-TYPE | 24 | 18 | 25 | 4 | 15 | 27 |
P value = 0.00047 (Fisher's exact test), Q value = 0.0023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
20Q GAIN MUTATED | 1 | 0 | 9 |
20Q GAIN WILD-TYPE | 17 | 59 | 37 |
P value = 0.035 (Fisher's exact test), Q value = 0.062
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
22Q GAIN MUTATED | 1 | 4 | 0 |
22Q GAIN WILD-TYPE | 64 | 27 | 27 |
P value = 0.0318 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
22Q GAIN MUTATED | 0 | 2 | 3 | 0 |
22Q GAIN WILD-TYPE | 39 | 34 | 21 | 24 |
P value = 0.0251 (Fisher's exact test), Q value = 0.049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
XP GAIN MUTATED | 0 | 3 | 0 |
XP GAIN WILD-TYPE | 65 | 28 | 27 |
P value = 0.00113 (Fisher's exact test), Q value = 0.0047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
XQ GAIN MUTATED | 0 | 5 | 0 |
XQ GAIN WILD-TYPE | 65 | 26 | 27 |
P value = 0.00781 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
XQ GAIN MUTATED | 0 | 1 | 4 | 0 |
XQ GAIN WILD-TYPE | 39 | 35 | 20 | 24 |
P value = 0.0482 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
XQ GAIN MUTATED | 5 | 0 | 0 | 0 |
XQ GAIN WILD-TYPE | 40 | 31 | 29 | 14 |
P value = 0.0122 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
XQ GAIN MUTATED | 0 | 0 | 5 |
XQ GAIN WILD-TYPE | 18 | 59 | 41 |
P value = 0.00543 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
1P LOSS MUTATED | 0 | 4 | 0 |
1P LOSS WILD-TYPE | 65 | 27 | 27 |
P value = 0.00228 (Fisher's exact test), Q value = 0.0076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
1P LOSS MUTATED | 0 | 0 | 4 | 0 |
1P LOSS WILD-TYPE | 39 | 36 | 20 | 24 |
P value = 0.0465 (Fisher's exact test), Q value = 0.077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
1P LOSS MUTATED | 0 | 0 | 4 |
1P LOSS WILD-TYPE | 18 | 59 | 42 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
3P LOSS MUTATED | 1 | 10 | 1 |
3P LOSS WILD-TYPE | 64 | 21 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
3P LOSS MUTATED | 0 | 2 | 10 | 0 |
3P LOSS WILD-TYPE | 39 | 34 | 14 | 24 |
P value = 0.00179 (Fisher's exact test), Q value = 0.0067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
3P LOSS MUTATED | 8 | 1 | 1 |
3P LOSS WILD-TYPE | 19 | 23 | 38 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
3P LOSS MUTATED | 2 | 0 | 0 | 8 |
3P LOSS WILD-TYPE | 14 | 23 | 31 | 12 |
P value = 0.00131 (Fisher's exact test), Q value = 0.0052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
3P LOSS MUTATED | 9 | 0 | 0 | 3 |
3P LOSS WILD-TYPE | 36 | 31 | 29 | 11 |
P value = 0.00073 (Fisher's exact test), Q value = 0.0033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
3P LOSS MUTATED | 10 | 0 | 0 | 2 |
3P LOSS WILD-TYPE | 37 | 42 | 20 | 8 |
P value = 0.00079 (Fisher's exact test), Q value = 0.0035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
3P LOSS MUTATED | 12 | 0 | 0 | 0 | 0 |
3P LOSS WILD-TYPE | 46 | 61 | 1 | 2 | 1 |
P value = 0.00445 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
3P LOSS MUTATED | 6 | 0 | 4 | 2 | 0 | 0 |
3P LOSS WILD-TYPE | 21 | 18 | 24 | 5 | 16 | 27 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
3P LOSS MUTATED | 0 | 0 | 12 |
3P LOSS WILD-TYPE | 18 | 59 | 34 |
P value = 0.00065 (Fisher's exact test), Q value = 0.003
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
3P LOSS MUTATED | 7 | 0 | 5 | 0 |
3P LOSS WILD-TYPE | 22 | 33 | 28 | 28 |
P value = 0.00074 (Fisher's exact test), Q value = 0.0033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
3Q LOSS MUTATED | 0 | 6 | 1 |
3Q LOSS WILD-TYPE | 65 | 25 | 26 |
P value = 0.00024 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
3Q LOSS MUTATED | 0 | 1 | 6 | 0 |
3Q LOSS WILD-TYPE | 39 | 35 | 18 | 24 |
P value = 0.00829 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
3Q LOSS MUTATED | 5 | 1 | 0 |
3Q LOSS WILD-TYPE | 22 | 23 | 39 |
P value = 0.00115 (Fisher's exact test), Q value = 0.0047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
3Q LOSS MUTATED | 1 | 0 | 0 | 5 |
3Q LOSS WILD-TYPE | 15 | 23 | 31 | 15 |
P value = 0.0309 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
3Q LOSS MUTATED | 6 | 0 | 0 | 1 |
3Q LOSS WILD-TYPE | 39 | 31 | 29 | 13 |
P value = 0.0314 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
3Q LOSS MUTATED | 6 | 0 | 0 | 1 |
3Q LOSS WILD-TYPE | 41 | 42 | 20 | 9 |
P value = 0.0336 (Fisher's exact test), Q value = 0.06
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
3Q LOSS MUTATED | 7 | 0 | 0 | 0 | 0 |
3Q LOSS WILD-TYPE | 51 | 61 | 1 | 2 | 1 |
P value = 0.00205 (Fisher's exact test), Q value = 0.0074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
3Q LOSS MUTATED | 0 | 0 | 7 |
3Q LOSS WILD-TYPE | 18 | 59 | 39 |
P value = 0.00844 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
3Q LOSS MUTATED | 5 | 0 | 2 | 0 |
3Q LOSS WILD-TYPE | 24 | 33 | 31 | 28 |
P value = 0.0079 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
4P LOSS MUTATED | 0 | 4 | 1 |
4P LOSS WILD-TYPE | 65 | 27 | 26 |
P value = 0.0125 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
4P LOSS MUTATED | 1 | 0 | 4 | 0 |
4P LOSS WILD-TYPE | 38 | 36 | 20 | 24 |
P value = 0.0496 (Fisher's exact test), Q value = 0.082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
4P LOSS MUTATED | 5 | 0 | 0 | 0 |
4P LOSS WILD-TYPE | 40 | 31 | 29 | 14 |
P value = 0.0283 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
4Q LOSS MUTATED | 0 | 3 | 1 |
4Q LOSS WILD-TYPE | 65 | 28 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
6P LOSS MUTATED | 1 | 18 | 1 |
6P LOSS WILD-TYPE | 64 | 13 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
6P LOSS MUTATED | 2 | 3 | 15 | 0 |
6P LOSS WILD-TYPE | 37 | 33 | 9 | 24 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
6P LOSS MUTATED | 13 | 1 | 1 |
6P LOSS WILD-TYPE | 14 | 23 | 38 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
6P LOSS MUTATED | 2 | 0 | 2 | 11 |
6P LOSS WILD-TYPE | 14 | 23 | 29 | 9 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
6P LOSS MUTATED | 14 | 0 | 0 | 6 |
6P LOSS WILD-TYPE | 31 | 31 | 29 | 8 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
6P LOSS MUTATED | 15 | 0 | 0 | 5 |
6P LOSS WILD-TYPE | 32 | 42 | 20 | 5 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
6P LOSS MUTATED | 19 | 0 | 0 | 1 | 0 |
6P LOSS WILD-TYPE | 39 | 61 | 1 | 1 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
6P LOSS MUTATED | 9 | 0 | 8 | 3 | 0 | 0 |
6P LOSS WILD-TYPE | 18 | 18 | 20 | 4 | 16 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
6P LOSS MUTATED | 1 | 0 | 19 |
6P LOSS WILD-TYPE | 17 | 59 | 27 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
6P LOSS MUTATED | 10 | 0 | 10 | 0 |
6P LOSS WILD-TYPE | 19 | 33 | 23 | 28 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
6Q LOSS MUTATED | 0 | 17 | 2 |
6Q LOSS WILD-TYPE | 65 | 14 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
6Q LOSS MUTATED | 1 | 3 | 15 | 0 |
6Q LOSS WILD-TYPE | 38 | 33 | 9 | 24 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
6Q LOSS MUTATED | 12 | 1 | 1 |
6Q LOSS WILD-TYPE | 15 | 23 | 38 |
P value = 4e-05 (Fisher's exact test), Q value = 3e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
6Q LOSS MUTATED | 2 | 1 | 1 | 10 |
6Q LOSS WILD-TYPE | 14 | 22 | 30 | 10 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
6Q LOSS MUTATED | 12 | 0 | 0 | 7 |
6Q LOSS WILD-TYPE | 33 | 31 | 29 | 7 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
6Q LOSS MUTATED | 13 | 0 | 1 | 5 |
6Q LOSS WILD-TYPE | 34 | 42 | 19 | 5 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
6Q LOSS MUTATED | 17 | 1 | 0 | 1 | 0 |
6Q LOSS WILD-TYPE | 41 | 60 | 1 | 1 | 1 |
P value = 0.00029 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
6Q LOSS MUTATED | 9 | 0 | 6 | 3 | 1 | 0 |
6Q LOSS WILD-TYPE | 18 | 18 | 22 | 4 | 15 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
6Q LOSS MUTATED | 0 | 0 | 19 |
6Q LOSS WILD-TYPE | 18 | 59 | 27 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
6Q LOSS MUTATED | 10 | 1 | 8 | 0 |
6Q LOSS WILD-TYPE | 19 | 32 | 25 | 28 |
P value = 0.0165 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
9P LOSS MUTATED | 0 | 0 | 2 | 2 |
9P LOSS WILD-TYPE | 45 | 31 | 27 | 12 |
P value = 0.00363 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
9P LOSS MUTATED | 0 | 0 | 2 | 2 |
9P LOSS WILD-TYPE | 47 | 42 | 18 | 8 |
P value = 0.0104 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
10P LOSS MUTATED | 0 | 0 | 1 | 2 |
10P LOSS WILD-TYPE | 45 | 31 | 28 | 12 |
P value = 0.0216 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
10P LOSS MUTATED | 0 | 0 | 2 | 1 |
10P LOSS WILD-TYPE | 47 | 42 | 18 | 9 |
P value = 0.0158 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
10P LOSS MUTATED | 0 | 0 | 0 | 1 | 2 | 0 |
10P LOSS WILD-TYPE | 27 | 18 | 28 | 6 | 14 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
11P LOSS MUTATED | 0 | 9 | 0 |
11P LOSS WILD-TYPE | 65 | 22 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
11P LOSS MUTATED | 0 | 1 | 8 | 0 |
11P LOSS WILD-TYPE | 39 | 35 | 16 | 24 |
P value = 0.00806 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
11P LOSS MUTATED | 5 | 1 | 0 |
11P LOSS WILD-TYPE | 22 | 23 | 39 |
P value = 0.00115 (Fisher's exact test), Q value = 0.0047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
11P LOSS MUTATED | 1 | 0 | 0 | 5 |
11P LOSS WILD-TYPE | 15 | 23 | 31 | 15 |
P value = 0.00915 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
11P LOSS MUTATED | 7 | 0 | 0 | 2 |
11P LOSS WILD-TYPE | 38 | 31 | 29 | 12 |
P value = 0.00695 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
11P LOSS MUTATED | 8 | 0 | 0 | 1 |
11P LOSS WILD-TYPE | 39 | 42 | 20 | 9 |
P value = 0.00809 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
11P LOSS MUTATED | 9 | 0 | 0 | 0 | 0 |
11P LOSS WILD-TYPE | 49 | 61 | 1 | 2 | 1 |
P value = 0.00014 (Fisher's exact test), Q value = 0.00088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
11P LOSS MUTATED | 0 | 0 | 9 |
11P LOSS WILD-TYPE | 18 | 59 | 37 |
P value = 0.00781 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
11P LOSS MUTATED | 5 | 0 | 4 | 0 |
11P LOSS WILD-TYPE | 24 | 33 | 29 | 28 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
11Q LOSS MUTATED | 0 | 7 | 0 |
11Q LOSS WILD-TYPE | 65 | 24 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
11Q LOSS MUTATED | 0 | 0 | 7 | 0 |
11Q LOSS WILD-TYPE | 39 | 36 | 17 | 24 |
P value = 0.0289 (Fisher's exact test), Q value = 0.055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
11Q LOSS MUTATED | 4 | 1 | 0 |
11Q LOSS WILD-TYPE | 23 | 23 | 39 |
P value = 0.00605 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
11Q LOSS MUTATED | 1 | 0 | 0 | 4 |
11Q LOSS WILD-TYPE | 15 | 23 | 31 | 16 |
P value = 0.0314 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
11Q LOSS MUTATED | 6 | 0 | 0 | 1 |
11Q LOSS WILD-TYPE | 39 | 31 | 29 | 13 |
P value = 0.0137 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
11Q LOSS MUTATED | 7 | 0 | 0 | 0 |
11Q LOSS WILD-TYPE | 40 | 42 | 20 | 10 |
P value = 0.0331 (Fisher's exact test), Q value = 0.059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
11Q LOSS MUTATED | 7 | 0 | 0 | 0 | 0 |
11Q LOSS WILD-TYPE | 51 | 61 | 1 | 2 | 1 |
P value = 0.00225 (Fisher's exact test), Q value = 0.0076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
11Q LOSS MUTATED | 0 | 0 | 7 |
11Q LOSS WILD-TYPE | 18 | 59 | 39 |
P value = 0.00849 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
11Q LOSS MUTATED | 5 | 0 | 2 | 0 |
11Q LOSS WILD-TYPE | 24 | 33 | 31 | 28 |
P value = 0.00471 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
12P LOSS MUTATED | 1 | 6 | 1 |
12P LOSS WILD-TYPE | 64 | 25 | 26 |
P value = 7e-05 (Fisher's exact test), Q value = 0.00049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
12P LOSS MUTATED | 1 | 0 | 7 | 0 |
12P LOSS WILD-TYPE | 38 | 36 | 17 | 24 |
P value = 0.011 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
12P LOSS MUTATED | 4 | 0 | 0 |
12P LOSS WILD-TYPE | 23 | 24 | 39 |
P value = 0.00239 (Fisher's exact test), Q value = 0.0079
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
12P LOSS MUTATED | 0 | 0 | 0 | 4 |
12P LOSS WILD-TYPE | 16 | 23 | 31 | 16 |
P value = 0.0077 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
12P LOSS MUTATED | 7 | 0 | 0 | 0 |
12P LOSS WILD-TYPE | 38 | 31 | 29 | 14 |
P value = 0.0142 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
12P LOSS MUTATED | 7 | 0 | 0 | 0 |
12P LOSS WILD-TYPE | 40 | 42 | 20 | 10 |
P value = 0.0219 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
12P LOSS MUTATED | 8 | 0 | 0 | 0 | 0 |
12P LOSS WILD-TYPE | 50 | 61 | 1 | 2 | 1 |
P value = 0.00313 (Fisher's exact test), Q value = 0.0099
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
12P LOSS MUTATED | 1 | 0 | 7 |
12P LOSS WILD-TYPE | 17 | 59 | 39 |
P value = 0.0196 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
12P LOSS MUTATED | 4 | 0 | 4 | 0 |
12P LOSS WILD-TYPE | 25 | 33 | 29 | 28 |
P value = 0.00221 (Fisher's exact test), Q value = 0.0076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
12Q LOSS MUTATED | 1 | 6 | 0 |
12Q LOSS WILD-TYPE | 64 | 25 | 27 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
12Q LOSS MUTATED | 0 | 0 | 7 | 0 |
12Q LOSS WILD-TYPE | 39 | 36 | 17 | 24 |
P value = 0.0109 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
12Q LOSS MUTATED | 4 | 0 | 0 |
12Q LOSS WILD-TYPE | 23 | 24 | 39 |
P value = 0.0026 (Fisher's exact test), Q value = 0.0085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
12Q LOSS MUTATED | 0 | 0 | 0 | 4 |
12Q LOSS WILD-TYPE | 16 | 23 | 31 | 16 |
P value = 0.00798 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
12Q LOSS MUTATED | 7 | 0 | 0 | 0 |
12Q LOSS WILD-TYPE | 38 | 31 | 29 | 14 |
P value = 0.0138 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
12Q LOSS MUTATED | 7 | 0 | 0 | 0 |
12Q LOSS WILD-TYPE | 40 | 42 | 20 | 10 |
P value = 0.0337 (Fisher's exact test), Q value = 0.06
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
12Q LOSS MUTATED | 7 | 0 | 0 | 0 | 0 |
12Q LOSS WILD-TYPE | 51 | 61 | 1 | 2 | 1 |
P value = 0.00209 (Fisher's exact test), Q value = 0.0074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
12Q LOSS MUTATED | 0 | 0 | 7 |
12Q LOSS WILD-TYPE | 18 | 59 | 39 |
P value = 0.0357 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
12Q LOSS MUTATED | 4 | 0 | 3 | 0 |
12Q LOSS WILD-TYPE | 25 | 33 | 30 | 28 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
13Q LOSS MUTATED | 0 | 9 | 5 |
13Q LOSS WILD-TYPE | 65 | 22 | 22 |
P value = 0.00617 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
13Q LOSS MUTATED | 2 | 2 | 8 | 2 |
13Q LOSS WILD-TYPE | 37 | 34 | 16 | 22 |
P value = 0.00955 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
13Q LOSS MUTATED | 7 | 3 | 1 |
13Q LOSS WILD-TYPE | 20 | 21 | 38 |
P value = 0.0401 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
13Q LOSS MUTATED | 2 | 2 | 1 | 6 |
13Q LOSS WILD-TYPE | 14 | 21 | 30 | 14 |
P value = 0.0427 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
16P LOSS MUTATED | 3 | 0 | 0 |
16P LOSS WILD-TYPE | 24 | 24 | 39 |
P value = 0.0149 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
16P LOSS MUTATED | 0 | 0 | 0 | 3 |
16P LOSS WILD-TYPE | 16 | 23 | 31 | 17 |
P value = 0.00524 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
16Q LOSS MUTATED | 1 | 7 | 5 | 0 |
16Q LOSS WILD-TYPE | 38 | 29 | 19 | 24 |
P value = 0.0067 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
16Q LOSS MUTATED | 7 | 1 | 1 |
16Q LOSS WILD-TYPE | 20 | 23 | 38 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
16Q LOSS MUTATED | 0 | 1 | 0 | 8 |
16Q LOSS WILD-TYPE | 16 | 22 | 31 | 12 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
16Q LOSS MUTATED | 3 | 1 | 1 | 8 |
16Q LOSS WILD-TYPE | 42 | 30 | 28 | 6 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
16Q LOSS MUTATED | 3 | 1 | 1 | 8 |
16Q LOSS WILD-TYPE | 44 | 41 | 19 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
16Q LOSS MUTATED | 1 | 0 | 4 | 6 | 1 | 1 |
16Q LOSS WILD-TYPE | 26 | 18 | 24 | 1 | 15 | 26 |
P value = 0.00152 (Fisher's exact test), Q value = 0.0058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
16Q LOSS MUTATED | 0 | 2 | 11 |
16Q LOSS WILD-TYPE | 18 | 57 | 35 |
P value = 0.00079 (Fisher's exact test), Q value = 0.0035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
16Q LOSS MUTATED | 1 | 1 | 10 | 1 |
16Q LOSS WILD-TYPE | 28 | 32 | 23 | 27 |
P value = 0.022 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
17P LOSS MUTATED | 3 | 7 | 4 |
17P LOSS WILD-TYPE | 62 | 24 | 23 |
P value = 0.00147 (Fisher's exact test), Q value = 0.0057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
17P LOSS MUTATED | 1 | 6 | 7 | 0 |
17P LOSS WILD-TYPE | 38 | 30 | 17 | 24 |
P value = 0.00015 (Fisher's exact test), Q value = 0.00092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
17P LOSS MUTATED | 8 | 1 | 0 |
17P LOSS WILD-TYPE | 19 | 23 | 39 |
P value = 0.00023 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
17P LOSS MUTATED | 0 | 2 | 0 | 7 |
17P LOSS WILD-TYPE | 16 | 21 | 31 | 13 |
P value = 0.0178 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
17P LOSS MUTATED | 7 | 0 | 3 | 4 |
17P LOSS WILD-TYPE | 38 | 31 | 26 | 10 |
P value = 0.00086 (Fisher's exact test), Q value = 0.0037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
17P LOSS MUTATED | 7 | 0 | 3 | 4 |
17P LOSS WILD-TYPE | 40 | 42 | 17 | 6 |
P value = 0.0021 (Fisher's exact test), Q value = 0.0074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
17P LOSS MUTATED | 2 | 0 | 5 | 3 | 4 | 0 |
17P LOSS WILD-TYPE | 25 | 18 | 23 | 4 | 12 | 27 |
P value = 0.0282 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
17P LOSS MUTATED | 1 | 3 | 10 |
17P LOSS WILD-TYPE | 17 | 56 | 36 |
P value = 0.0106 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
17Q LOSS MUTATED | 0 | 4 | 2 |
17Q LOSS WILD-TYPE | 65 | 27 | 25 |
P value = 0.00856 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
17Q LOSS MUTATED | 0 | 2 | 4 | 0 |
17Q LOSS WILD-TYPE | 39 | 34 | 20 | 24 |
P value = 0.011 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
17Q LOSS MUTATED | 4 | 0 | 0 |
17Q LOSS WILD-TYPE | 23 | 24 | 39 |
P value = 0.0027 (Fisher's exact test), Q value = 0.0088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
17Q LOSS MUTATED | 0 | 0 | 0 | 4 |
17Q LOSS WILD-TYPE | 16 | 23 | 31 | 16 |
P value = 0.00187 (Fisher's exact test), Q value = 0.0069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
18P LOSS MUTATED | 1 | 6 | 0 |
18P LOSS WILD-TYPE | 64 | 25 | 27 |
P value = 0.00878 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
18P LOSS MUTATED | 1 | 1 | 5 | 0 |
18P LOSS WILD-TYPE | 38 | 35 | 19 | 24 |
P value = 0.0105 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
18P LOSS MUTATED | 4 | 0 | 0 |
18P LOSS WILD-TYPE | 23 | 24 | 39 |
P value = 0.031 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
18P LOSS MUTATED | 6 | 0 | 0 | 1 |
18P LOSS WILD-TYPE | 39 | 31 | 29 | 13 |
P value = 0.0304 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
18P LOSS MUTATED | 6 | 0 | 0 | 1 |
18P LOSS WILD-TYPE | 41 | 42 | 20 | 9 |
P value = 0.013 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
18P LOSS MUTATED | 6 | 0 | 0 | 1 | 0 |
18P LOSS WILD-TYPE | 52 | 61 | 1 | 1 | 1 |
P value = 0.00206 (Fisher's exact test), Q value = 0.0074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
18P LOSS MUTATED | 0 | 0 | 7 |
18P LOSS WILD-TYPE | 18 | 59 | 39 |
P value = 0.0439 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
18P LOSS MUTATED | 3 | 0 | 4 | 0 |
18P LOSS WILD-TYPE | 26 | 33 | 29 | 28 |
P value = 0.00212 (Fisher's exact test), Q value = 0.0074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
18Q LOSS MUTATED | 1 | 6 | 0 |
18Q LOSS WILD-TYPE | 64 | 25 | 27 |
P value = 0.00835 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
18Q LOSS MUTATED | 1 | 1 | 5 | 0 |
18Q LOSS WILD-TYPE | 38 | 35 | 19 | 24 |
P value = 0.0111 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
18Q LOSS MUTATED | 4 | 0 | 0 |
18Q LOSS WILD-TYPE | 23 | 24 | 39 |
P value = 0.0318 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
18Q LOSS MUTATED | 6 | 0 | 0 | 1 |
18Q LOSS WILD-TYPE | 39 | 31 | 29 | 13 |
P value = 0.0316 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
18Q LOSS MUTATED | 6 | 0 | 0 | 1 |
18Q LOSS WILD-TYPE | 41 | 42 | 20 | 9 |
P value = 0.0135 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
18Q LOSS MUTATED | 6 | 0 | 0 | 1 | 0 |
18Q LOSS WILD-TYPE | 52 | 61 | 1 | 1 | 1 |
P value = 0.00225 (Fisher's exact test), Q value = 0.0076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
18Q LOSS MUTATED | 0 | 0 | 7 |
18Q LOSS WILD-TYPE | 18 | 59 | 39 |
P value = 0.0437 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
18Q LOSS MUTATED | 3 | 0 | 4 | 0 |
18Q LOSS WILD-TYPE | 26 | 33 | 29 | 28 |
P value = 0.00128 (Fisher's exact test), Q value = 0.0052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
19P LOSS MUTATED | 0 | 0 | 0 | 3 |
19P LOSS WILD-TYPE | 45 | 31 | 29 | 11 |
P value = 5e-04 (Fisher's exact test), Q value = 0.0024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
19P LOSS MUTATED | 0 | 0 | 0 | 3 |
19P LOSS WILD-TYPE | 47 | 42 | 20 | 7 |
P value = 0.0103 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
19P LOSS MUTATED | 0 | 0 | 1 | 2 | 0 | 0 |
19P LOSS WILD-TYPE | 27 | 18 | 27 | 5 | 16 | 27 |
P value = 0.00136 (Fisher's exact test), Q value = 0.0054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
19Q LOSS MUTATED | 0 | 0 | 0 | 3 |
19Q LOSS WILD-TYPE | 45 | 31 | 29 | 11 |
P value = 4e-04 (Fisher's exact test), Q value = 0.002
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
19Q LOSS MUTATED | 0 | 0 | 0 | 3 |
19Q LOSS WILD-TYPE | 47 | 42 | 20 | 7 |
P value = 0.0099 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
19Q LOSS MUTATED | 0 | 0 | 1 | 2 | 0 | 0 |
19Q LOSS WILD-TYPE | 27 | 18 | 27 | 5 | 16 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
21Q LOSS MUTATED | 0 | 9 | 0 |
21Q LOSS WILD-TYPE | 65 | 22 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 1e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
21Q LOSS MUTATED | 0 | 1 | 8 | 0 |
21Q LOSS WILD-TYPE | 39 | 35 | 16 | 24 |
P value = 0.0113 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
21Q LOSS MUTATED | 4 | 0 | 0 |
21Q LOSS WILD-TYPE | 23 | 24 | 39 |
P value = 0.00297 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
21Q LOSS MUTATED | 0 | 0 | 0 | 4 |
21Q LOSS WILD-TYPE | 16 | 23 | 31 | 16 |
P value = 0.00669 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
21Q LOSS MUTATED | 8 | 0 | 0 | 1 |
21Q LOSS WILD-TYPE | 37 | 31 | 29 | 13 |
P value = 0.0066 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
21Q LOSS MUTATED | 8 | 0 | 0 | 1 |
21Q LOSS WILD-TYPE | 39 | 42 | 20 | 9 |
P value = 0.00857 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
21Q LOSS MUTATED | 9 | 0 | 0 | 0 | 0 |
21Q LOSS WILD-TYPE | 49 | 61 | 1 | 2 | 1 |
P value = 0.00022 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
21Q LOSS MUTATED | 0 | 0 | 9 |
21Q LOSS WILD-TYPE | 18 | 59 | 37 |
P value = 0.00859 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 29 | 33 | 33 | 28 |
21Q LOSS MUTATED | 5 | 0 | 4 | 0 |
21Q LOSS WILD-TYPE | 24 | 33 | 29 | 28 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
22Q LOSS MUTATED | 0 | 4 | 9 |
22Q LOSS WILD-TYPE | 65 | 27 | 18 |
P value = 0.0419 (Fisher's exact test), Q value = 0.072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
22Q LOSS MUTATED | 4 | 1 | 1 | 4 |
22Q LOSS WILD-TYPE | 12 | 22 | 30 | 16 |
P value = 0.0447 (Fisher's exact test), Q value = 0.075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
22Q LOSS MUTATED | 3 | 4 | 2 | 4 |
22Q LOSS WILD-TYPE | 44 | 38 | 18 | 6 |
P value = 0.00296 (Fisher's exact test), Q value = 0.0095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
XP LOSS MUTATED | 0 | 5 | 2 |
XP LOSS WILD-TYPE | 65 | 26 | 25 |
P value = 0.00912 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
XP LOSS MUTATED | 1 | 1 | 5 | 0 |
XP LOSS WILD-TYPE | 38 | 35 | 19 | 24 |
P value = 0.0301 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 31 | 29 | 14 |
XP LOSS MUTATED | 5 | 0 | 0 | 2 |
XP LOSS WILD-TYPE | 40 | 31 | 29 | 12 |
P value = 0.0318 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
XP LOSS MUTATED | 6 | 0 | 0 | 1 |
XP LOSS WILD-TYPE | 41 | 42 | 20 | 9 |
P value = 0.00733 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
XP LOSS MUTATED | 1 | 0 | 6 |
XP LOSS WILD-TYPE | 17 | 59 | 40 |
P value = 0.0284 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 65 | 31 | 27 |
XQ LOSS MUTATED | 0 | 3 | 1 |
XQ LOSS WILD-TYPE | 65 | 28 | 26 |
P value = 0.0363 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 36 | 24 | 24 |
XQ LOSS MUTATED | 0 | 1 | 3 | 0 |
XQ LOSS WILD-TYPE | 39 | 35 | 21 | 24 |
P value = 0.0424 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 27 | 24 | 39 |
XQ LOSS MUTATED | 3 | 0 | 0 |
XQ LOSS WILD-TYPE | 24 | 24 | 39 |
P value = 0.0149 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
XQ LOSS MUTATED | 0 | 0 | 0 | 3 |
XQ LOSS WILD-TYPE | 16 | 23 | 31 | 17 |
P value = 0.0252 (Fisher's exact test), Q value = 0.049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 58 | 61 | 1 | 2 | 1 |
XQ LOSS MUTATED | 3 | 0 | 0 | 1 | 0 |
XQ LOSS WILD-TYPE | 55 | 61 | 1 | 1 | 1 |
P value = 0.0452 (Fisher's exact test), Q value = 0.076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 18 | 59 | 46 |
XQ LOSS MUTATED | 0 | 0 | 4 |
XQ LOSS WILD-TYPE | 18 | 59 | 42 |
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Copy number data file = broad_values_by_arm.txt from GISTIC pipeline
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Processed Copy number data file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/THYM-TP/15104466/transformed.cor.cli.txt
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Molecular subtypes file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/THYM-TP/15111344/THYM-TP.transferedmergedcluster.txt
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Number of patients = 123
-
Number of significantly arm-level cnvs = 52
-
Number of molecular subtypes = 10
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Exclude genes that fewer than K tumors have mutations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.